##maf version=1 scoring=roast.v3.3 a score=100.000000 s hg38.chr4_KI270789v1_alt 0 1 + 205944 G s otoGar3.GL873580 11151063 1 - 11315646 G i otoGar3.GL873580 N 0 C 0 a score=520132.000000 s hg38.chr4_KI270789v1_alt 1 53 + 205944 AATTCCATTCAATCCATACCTGCATGTGCCTACCGTGAGTGAGGCTCTGAAAC s panTro5.chr4 192787977 53 + 194502333 AATTCCATTCAATCCATACCTGCATGTGCCTACCGTGAGTTAGGCTCTGAAAC i panTro5.chr4 N 0 C 0 s panPan2.chr4 192676771 53 + 195804263 AATTCCATTCAATCCATACCTGCATGTGCCTACCGTGAGTTAGGCTCTGAAAC i panPan2.chr4 N 0 C 0 s gorGor5.CYUI01015356v1 3714036 53 + 4876863 AATTCCATTCAATCCATACCTGCATGTGCCTACCGTGAGTAAGGCTCTGAAAC i gorGor5.CYUI01015356v1 N 0 C 0 s nomLeu3.chr7b 112600031 53 + 115148730 AATTCCATTCATTCCATACCTGCATGTGCCTACCGTGAGTAAGGCTCTGAAAC i nomLeu3.chr7b N 0 C 0 s rheMac8.chr5 188882535 53 + 190429646 AATTCCATTCAACCCATACCTGCACGTGCCTACCGTGAGTAAGGCTCTGAAAC i rheMac8.chr5 N 0 C 0 s macFas5.chr5 187829984 53 + 189454096 AATTCCATTCAACCCATACCTGCACGTGCCTACCGTGAGTAAGGCTCTGAAAC i macFas5.chr5 N 0 C 0 s macNem1.NW_012013133v1 24211145 53 - 25927173 AATTCCATTCAACCCATACCTGCATGTGCCTACCGTGAGAAAGGCTCTGAAAC i macNem1.NW_012013133v1 N 0 C 0 s cerAty1.NW_012001672v1 3245548 53 + 4669795 AATTCCATTCAACCCATACCTGCATGTGCCTACCGTGAGTAAGGCTCTGAAAC i cerAty1.NW_012001672v1 N 0 C 0 s chlSab2.chr7 134202855 53 + 135778131 AATTCCATTCAACCCATACCTGCATGAGCCTGCCGTGAGTAAGGCTCTGAAAC i chlSab2.chr7 N 0 C 0 s manLeu1.NW_012102221v1 2633330 53 - 2847728 AATTCCATTCAACCCATACCTGCATGTGCCTACCGTGAGTAAGGCTCTGAAAC i manLeu1.NW_012102221v1 N 0 C 0 s colAng1.NW_012116221v1 765402 53 + 2368649 AATTCCATTCAACCCATACCTGCATGTGCCTACCGTGAGTAAGGCTCTGAAAC i colAng1.NW_012116221v1 N 0 C 0 s saiBol1.JH378165 13030888 53 - 14256875 AATTCCGTTCAACCCACACGTGCCTGTGCCGGCCATGAGCACGGCTCTGAAGC i saiBol1.JH378165 N 0 C 0 s aotNan1.NW_018492112v1 3313229 53 - 5030052 AATTCCATTCAACCCACACCTGCCTGTGCTGGCCGTGAGTCCGGCTCTGAAGC i aotNan1.NW_018492112v1 N 0 C 0 s otoGar3.GL873580 11151064 51 - 11315646 GATTTCACTGAATCCGCACCTAAGTGTGCCTACTGTGTCTGAGGCACTGAA-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473643 52 - 129401213 AATTTCATTAAATCTTT-CCTATGTATGCCTGTTATGTTTGAGGCATTGGAAT i mm10.chr8 N 0 C 0 s canFam3.chr16 16843097 53 - 59632846 AAGTCCATTCAACCCATACTTAAGTGTGCCTACCGTGTCTAAGGCACAAGAAC i canFam3.chr16 N 0 C 0 s dasNov3.JH570353 1334005 53 - 2520184 AGTTCCTTTCAGTCCATCCATGTGTGCACCTGCTGTGTCTCAGGTGCTGGACT i dasNov3.JH570353 N 0 C 0 a score=145719.000000 s hg38.chr4_KI270789v1_alt 54 20 + 205944 TGGTGTTCCATGCACAAG-GC s panTro5.chr4 192788030 20 + 194502333 TGGTGTTCCATGCACAAG-GC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676824 20 + 195804263 TGGTGTTCCATGCACAAG-GC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714089 20 + 4876863 TGGTGTTCCACACACAAG-GC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600084 20 + 115148730 TGGTGTTCCAAGCACAAG-GC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882588 20 + 190429646 TGGTGTTCCATGCACAAG-GC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830037 20 + 189454096 TGGTGTTCCATGCACAAG-GC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211198 20 - 25927173 TGGTGTTCCATGCACAAG-GC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245601 20 + 4669795 TGGTGTTCCATGCACAAG-GC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134202908 20 + 135778131 TGGTGTTCTATGCACAAG-GC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633383 20 - 2847728 TGGTGTTCCATGCACAAG-GC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765455 20 + 2368649 TGGTGTTCCATGCACAAG-GC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13030941 16 - 14256875 CGCTGTTCCA--CATAGG--- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3313282 17 - 5030052 CGCTATTCCA--CACAGGC-- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17447960 20 - 93316391 TGGTATTCCATACTCAGG-GC i micMur3.chr14 N 0 C 0 s proCoq1.NW_012145301v1 3861455 20 + 3993831 TGGTGTTCCATACCCAGG-GC i proCoq1.NW_012145301v1 N 0 C 0 s otoGar3.GL873580 11151115 20 - 11315646 CGCTACTCCATACTCAGG-GC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473695 7 - 129401213 TAGGGTT-------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16843150 20 - 59632846 TGGTGTTCCATACCCACC-AC i canFam3.chr16 C 0 I 27 s dasNov3.JH570353 1334058 8 - 2520184 TGGTGGTC------------- i dasNov3.JH570353 C 0 C 0 a score=804359.000000 s hg38.chr4_KI270789v1_alt 74 72 + 205944 CAATTCAGTCTGAATAACACTGA----A------GGGGACAGAATTAAGAGGAGAATTTCTGGGCCACAGGGTAGAAAGCGT s panTro5.chr4 192788050 72 + 194502333 CAATTCAGTCTGAATAACACTGA----A------GGGGACAGAATTAAGAGGAGAATTTCTGGGCCACAGGGTAGAAAGCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676844 72 + 195804263 CAATTCAGTCTGAATAACACTGA----A------GGGGACAGAATTAAGAGGAGAATTTCTGGGCCACAGGGTAGAAAGCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714109 72 + 4876863 CAACTCAGTCTGAATAACACTGA----A------GGGGACAGAATTAAGAGGAGAATTTCTGGGCCACAGGGTAGAAAGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600104 71 + 115148730 TAATTCAGCCTGAATAACACTGA----A------GGGGACAGAATT-AGAGGAGAATTTCCGGGCCACAGGGTAGAAAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882608 69 + 190429646 TAATTCAGTCTCAGTAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTGGGCCACAGGGTAGAAAGCGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830057 69 + 189454096 TAATTCAGTCTCAGTAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTGGGCCACAGGGTAGAAAGTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211218 69 - 25927173 TAATTCAGTCTCAGTAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTAGGCCACAGGGTAGAAAGCGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245621 69 + 4669795 TAATTCAGTCTCAGTAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTGGGCCACAGGGTAGAAAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134202928 69 + 135778131 TGATTCAGTCTCAATAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTGGGCCACAGGGTAGAAAGTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633403 69 - 2847728 TAATTCAGTCTCAGTAACACTGA----A------TGGGACAGAATGAA---GAGAATTTCTGGGCCACAGGGTAGAAAGCGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765475 72 + 2368649 TAATTCAGTCTCAGTAACACTGA----A------GGGTACAGAATGAAGAGGAGAATTTCTGGGTCACAGGGTAGAAAGCGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13030957 71 - 14256875 CAATTCAGTCTGAGTAACACTGG----A------GGGGCCAGTACTAAGAGGAGAATATCT-AGGCACAGGGTAGAAAGCAT i saiBol1.JH378165 C 0 I 298 s cebCap1.NW_016107886v1 919981 71 - 2196201 CAATTCAGTCTGAGTAACACTGG----A------GGGCGCAGAACTAAGAGGAGAATATCT-GGGCACAGGGTAGAAAGCAT i cebCap1.NW_016107886v1 N 0 C 0 s aotNan1.NW_018492112v1 3313299 72 - 5030052 TAATTCAGTCTGAATAACACTAG----A------GGGGACAGAATTAAGGGGAGAATATCTGGGGCACAGGGTAGAAAGCAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17447980 72 - 93316391 TAATTCATTCTGGATAGCATTGA----A------GTGGGCAGAATTAAGAGGAGAACTTCTAGGGTACCTGGTAGAAAGCAT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3861475 72 + 3993831 TAATTCAGTCTGAATAGCATTGA----A------GGGGGCAGAAGTAAGAGGAAAACTTCTGGGGCACCTGGCAGAAAGCAC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11151135 72 - 11315646 TAATTCAGCATAAATAGCACTCA----A------GGAGGCAGAACGAAGGGGAGAGATTCTGGGGCACTTGGTGGAAAGCAC i otoGar3.GL873580 C 0 I 6 s mm10.chr8 86473702 53 - 129401213 -----------AAATATCACAAATGTTA------TGAGGCATAATTGC---------ATTGGAGACACAGGGTAGAAAT--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16843197 78 - 59632846 TAATTCTGTCTGAATATCATAGA----GGGAAGTGGGGGAAGAAATAAGATGATAATTTCTGTGGCACAGCATAGAAAGCAT i canFam3.chr16 I 27 C 0 s dasNov3.JH570353 1334066 68 - 2520184 CAGCCCAGCCTGAATAGTGCTAA----G------GAGGAGAGAAGTGAATGGAGGATTTCTGGGACACA----AGAAAGCAC i dasNov3.JH570353 C 0 C 0 a score=12549.000000 s hg38.chr4_KI270789v1_alt 146 1 + 205944 A s panTro5.chr4 192788122 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676916 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714181 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600175 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882677 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830126 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211287 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245690 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134202997 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633472 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765547 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031326 1 - 14256875 a i saiBol1.JH378165 I 298 C 0 s cebCap1.NW_016107886v1 920052 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3313371 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 I 292 s micMur3.chr14 17448052 1 - 93316391 G i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3861547 1 + 3993831 G i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11151213 1 - 11315646 G i otoGar3.GL873580 I 6 C 0 s mm10.chr8 86473755 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16843275 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334134 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 a score=8265.000000 s hg38.chr4_KI270789v1_alt 147 1 + 205944 A s panTro5.chr4 192788123 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676917 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714182 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600176 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882678 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830127 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211288 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245691 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134202998 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633473 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765548 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031327 1 - 14256875 a i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920053 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 I 297 s aotNan1.NW_018492112v1 3313664 1 - 5030052 a i aotNan1.NW_018492112v1 I 292 C 0 s micMur3.chr14 17448053 1 - 93316391 G i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3861548 1 + 3993831 G i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11151214 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473756 1 - 129401213 G i mm10.chr8 C 0 C 0 s canFam3.chr16 16843276 1 - 59632846 G i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334135 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 a score=524002.000000 s hg38.chr4_KI270789v1_alt 148 39 + 205944 GAATGGCCTTGCAATGGGCAACCTATTCAGCCAGGGCCA s panTro5.chr4 192788124 39 + 194502333 GAATGGCCTTGCAATGGGCAACCTATTCAGCCAGGGCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676918 39 + 195804263 GAATGGCCTTGCAATGGGCAACCTATTCAGCCAGGGCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714183 39 + 4876863 GAATGGCCTTGCAATGGGCAACCTATTCAGCCAGTGCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600177 39 + 115148730 GAATGGCCTTGCAGTGGGCAGCCTATTCGGCCACGGCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882679 39 + 190429646 GAACGGCCTTGTAATGGGCAGCCTATTCAGCCATGGCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830128 39 + 189454096 GAATGGCCTTGTAATGGGCAGCCTATTCAGCCATGGCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211289 39 - 25927173 GAATGGCCTTGTAATGGGCAGCCTATTCAGCCATGGCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245692 39 + 4669795 GAATGGCCTTGTAATGGGCAGCCTATTCAGCCATGGCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134202999 39 + 135778131 GAATGGCCTTGTAATGGCCAGCCTATTCAGCCAGGGCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633474 39 - 2847728 GAATGGCCTTGTAATGGGCAGCCTATTCAGCCATGGCCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765549 39 + 2368649 GAATGGCCTTGTAATGGGCAGCCTCTTCAGCCAGGGCCA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031328 38 - 14256875 gaaTGGCCTTGCAATGGGCCACCTGTTTAGCCA-GGTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920351 39 - 2196201 GAACGGCCTTGCAATGGGCAACGTGTTTAGCCAGGGTTA i cebCap1.NW_016107886v1 I 297 C 0 s aotNan1.NW_018492112v1 3313665 39 - 5030052 gaaTGGCCTTGCAATGGGCAACCTGTTTAGCCAGGGTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448054 39 - 93316391 GGCTAGTCTTGCAATGGGCAACCTCTTCAGCCAGAGCCA i micMur3.chr14 C 0 I 72 s proCoq1.NW_012145301v1 3861549 39 + 3993831 GGCTAGTTTTGCAATGGGTAACCTCTTCAGCCAGGGCCA i proCoq1.NW_012145301v1 C 0 I 72 s otoGar3.GL873580 11151215 39 - 11315646 GGCTGTTTTTGCAATGGTCAGCCTCTTCAGCCAGGGCCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473757 37 - 129401213 GAATAAATTGTCAATGGGTAA--TATTCAACCAGAGCCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16843277 39 - 59632846 GAACAGCCTTGCAATGGAGGACCTATTAATCCAGGGCCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334136 38 - 2520184 AAGTAGCCTGACAATGGGTC-CTTACTCAGCCAGGGCCA i dasNov3.JH570353 C 0 C 0 a score=695001.000000 s hg38.chr4_KI270789v1_alt 187 77 + 205944 GCGTG-----AGGACACATACGACTCTAGAGGGCAGGTAGGAGCTGAAAGTGAGGAGAGCCGAGGTCTCAC-----CCTGAAGAGGA s panTro5.chr4 192788163 77 + 194502333 GCATG-----AGGACACATACGACTCTAGAGGGCAGGTAGGAGCTGAAAGTGAGGACAGCTGAGGTCTCAC-----CCTGAAGAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192676957 77 + 195804263 GCATG-----AGGACACATACGACTCTAGAGGGCAGGTAGGAGCTGAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714222 77 + 4876863 GCGTG-----AGGACACATACGACTCTAGAGGGCAGGTAGGAGCTGAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600216 77 + 115148730 GCGTG-----AGGACACATACGACTCTAGAGGGCAGGTAGGAGCTGAAAGTGAGGAGAGCCGAGGTCTCAC-----CCTGAAGAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882718 77 + 190429646 GCGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830167 77 + 189454096 GCGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211328 77 - 25927173 GCGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245731 77 + 4669795 GCGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCCGAGGTCTCAC-----CCTGAAGAGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203038 77 + 135778131 GCGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGATAGCCGAGGTCTCAC-----CCTGAAGAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633513 77 - 2847728 GTGTG-----AGGACACATACGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCCAAGGTCTCAC-----CCTGAAGAGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765588 77 + 2368649 GCGTG-----GGGACACACATGATTCTAGAGGGCAGGTAGGAGCTAAAAGTGAGGACAGCTGAGGTCTCAT-----CCTGAAGAGGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031366 76 - 14256875 GTGTG-----AGGATACACACAATTCTAGA-GGCAGGTAGGATCTGAGACTGAGGAGAGCAGAGGTCTGCC-----CCTGAAGAGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920390 75 - 2196201 GTGTG-----AGGATACACACAATTCCGGAGGGCAGGTAGGATCAGAGAGTGAGGAGAGC--AGGTCTGCC-----CCTGAAGAGGA i cebCap1.NW_016107886v1 C 0 I 45 s aotNan1.NW_018492112v1 3313704 81 - 5030052 GTGTGAGGATAGGATACACACAATTCTAGAGGGCAGGTAGGATCTGAGGGTGAGGAGAGCAGAGGTCTGCC-----CCTGAGCGGA- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11151254 80 - 11315646 ACACA-----AGG--ACATACAATTCTGTAAGGCAGGTAGAATCTGAAACTGAAGGGAACAGAGGTCTTACAGGTGCAGACAGAGTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473794 62 - 129401213 TCGTG-----AAGACA-ATA-AATTTTAAGCAATGGGTAGAATTTGAAAGTGAG---ACATGATATATAAG-----C---------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16843316 68 - 59632846 ACATA-----AGGACAGA----ATTTTAAGAGGTAGGTGGAGCCTGAAAATGAGGA-----GCGGTTTACA-----CATAAAGAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334174 66 - 2520184 ATGCA-----AGGACAGAGA--ATTCTAGA---TTGGTAGAATCTCAAATTAAGGC------AGCTTTACA-----CGTAAAGAACA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3861588 72 + 3993831 I e micMur3.chr14 17448093 72 - 93316391 I a score=630968.000000 s hg38.chr4_KI270789v1_alt 264 57 + 205944 AAGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAACCTCAAT s panTro5.chr4 192788240 57 + 194502333 AAGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAACCTCAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677034 57 + 195804263 AAGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAACCTCAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714299 57 + 4876863 AGGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAACCTCAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600293 57 + 115148730 AGGGGGAATGGAAGGTCGACTCCACTCATGGAGAATATTATTCAGTCCAACCTCAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882795 57 + 190429646 AGGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830244 57 + 189454096 AGGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211405 57 - 25927173 AGGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245808 57 + 4669795 AGGGGGAATGGAAGGTCAGCTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203115 57 + 135778131 AGGGGGAATGGAAGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633590 57 - 2847728 AGGGGGAATGGAGGGTCAACTCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765665 57 + 2368649 AGGGGGAATGGAAGGTCAACGCCACTAATTGAGAATATTATTCAGTCCAAACTCAAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031442 54 - 14256875 GGGGTGAATGGAAGGTAAACT-CACTAAC--AGACCGTTATTCAGTCCAACCTCAAT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3313785 56 - 5030052 AGGGTGAATGGAAGGTAAACT-CACTAACTGAGACTGTTATTCAGTCCAACCTCAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448165 57 - 93316391 AAGGTGAACGGAAGGGAAACTTCACTAGTTCATAATATTATTCAGTCCAATCTTGAT i micMur3.chr14 I 72 C 0 s proCoq1.NW_012145301v1 3861660 57 + 3993831 AAGGTGAACGGAAGGGAAACTTCACTAGTTCATAATATTATTCAGTCCAATCTTGAT i proCoq1.NW_012145301v1 I 72 C 0 s otoGar3.GL873580 11151334 57 - 11315646 AGGGTGAAGGGAAGGGAAGCATCACTACTTCACAGCAGCATTCAGGCCGACTCCAGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473856 52 - 129401213 -AATACAGGTGAAGTTAAACTCCACTAAT----AGTAACATCTAGTCCAGCCTTGGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16843384 50 - 59632846 AAAGTGAACTGAAGATAAACATCAATAATTCATAAT-------AGTCCAGCCTTGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334240 56 - 2520184 AGGGTTAACTGACGGTAAACTTCACTAATTCATGATA-TATTCAGCCCAACTTTTAT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 920465 45 - 2196201 I a score=200619.000000 s hg38.chr4_KI270789v1_alt 321 13 + 205944 ACAGATT-TATGGT s panTro5.chr4 192788297 13 + 194502333 ACAGATT-TATGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677091 13 + 195804263 ACAGATT-TATGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714356 13 + 4876863 ACAGATT-TATGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600350 13 + 115148730 ACAGATT-TATGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882852 13 + 190429646 ACAGATT-TATGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830301 13 + 189454096 ACAGATT-TATGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211462 13 - 25927173 ACAGATT-TATGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245865 13 + 4669795 GCAGATT-TATGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203172 13 + 135778131 ACAGATT-TATGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633647 13 - 2847728 ACAGATT-TATGGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765722 13 + 2368649 ACAGATT-TATGGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031496 13 - 14256875 ACAGATT-TATGGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920510 13 - 2196201 ACAGACT-TACGGT i cebCap1.NW_016107886v1 I 45 C 0 s aotNan1.NW_018492112v1 3313841 13 - 5030052 ACAGATT-TATGGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448222 13 - 93316391 GCAGATT-TATGGT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3861717 13 + 3993831 GCAGATT-TATGGT i proCoq1.NW_012145301v1 C 0 I 341 s otoGar3.GL873580 11151391 13 - 11315646 GCAGATT-TATGGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86473908 13 - 129401213 GCAGGTT-AATGAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16843434 13 - 59632846 ATAGGTT-TATGGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334296 14 - 2520184 ACAACTTACATAAA i dasNov3.JH570353 C 0 C 0 a score=1919344.000000 s hg38.chr4_KI270789v1_alt 334 192 + 205944 CAGTGTCACCCTTTCCTAGGAACAggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaag----------------catatc------------------tttgatccgtcctaactcagtttctcctaagagacgcagtcttgtgcaataccctt-aatctgcctgagcgttagttttcttagctgcaaaatggagtttataattcttgatctgtttcac s panTro5.chr4 192788310 192 + 194502333 CAGTGTCACCCTTTCCTAGGAACaggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaag----------------catatc------------------tttgatccgtcctaactcagtctctcctaagagacgcagtcttgtgtaataccctt-aatctgcctgagcattagttttcttagctgcaaaatggagttaataattcttgatctgtttcac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677104 192 + 195804263 CAGTGTCACCCTTTCCTAGGAACAggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaag----------------catatc------------------tttgatccgtcctaactcagtctctcctaagagacgcagtcttgtgtaataccctt-aatctgcctgagcattagttttcttagctgcaaaatggagttaataattcttgatctgtttcac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714369 192 + 4876863 CAGTGTCACCCTTTCCTAGGAACaggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaag----------------catatc------------------tttgatccatcctaactcagtctctcctaagagatgcagtcttgtgcaataccctt-aatctgccagagcgttagttttcttagctgcaaaatggagttaataattcttgatctgtttCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600363 191 + 115148730 CAGTGTCACCCTTTCCT-GGAACAggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcgggag--aaag----------------cgtatc------------------tttgatccgtcctaactcggtctctcctaggataccaagtcttgtgcgataccctt-aatctgcctgggcattagttttcttagctgcaaaatgaggttaataattcttgatctgtttcac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188882865 192 + 190429646 CAGTGTCATCCTTTGCCAGAAATCggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaaa----------------catgtc------------------tttgatccatcctaactcagtcttttgtaagatatgaagccttgtgcaataccctt-aatctgcctgagcgttagttttcttagctacaaagtgcagttaataattcttgatctttttcgc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830314 192 + 189454096 CAGTGTCATCCTTTGCCAGAAATCggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaaa----------------cgtgtc------------------tttgatccatcctaactcagtcttttgtaagatatgaagccttgtgcaataccctt-aatctgcctgagcgttagttttcttagctacaaagtgcagttaataattcttgatctgtttcgc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211475 192 - 25927173 CAGTGTCATCCTTTGCCAGAAATCggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaaa----------------cgtgtc------------------tttgatccatcctaactcagtcttttgtaagatatgaagccttgtgcaataccctt-aatctgcctgagcgttagttttcttagctacaaagtgcagttaataattcttgatctgtttcgc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3245878 192 + 4669795 CAGTGTCATCCTTTGCCAGAAATCAgcagcaggctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaaa----------------cgtgtc------------------tttgatccatcctaactcagtctttcgtaagatatgaagccttgtgcaataccctt-aatctgcctgagcgttaggtttcttagctacaaagtgcagttaataattcttgatctgtttcgc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203185 192 + 135778131 CAGTGTCATCCTTTGCCAGAAATCggcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaag----------------cgtgtc------------------tttgacccatcctaactcagtctttcataagatatgaagccttgtgcaataccctt-aatctgcctgagcgttagttttcttagctgcaaactgcagttaataattcttgatctgtttcgc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633660 192 - 2847728 CAGTGTCATCCTTTGCCAGAAACCAgcagcacgctgtgg---tgg--------------------------------------------------aagggtcacagactcggaag--aaaa----------------cgtgtc------------------tttgatccatcctaactcagtctttcgtaagatatgaagccttgtgcaataccctt-aatctgcctgagcgttagttttcttagctacaaagtgcagttaataattcttgatctgtttcgc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765735 192 + 2368649 CAGTATCATCCTTTGCCGGAAATCggcagcacgctatag---tgg--------------------------------------------------aagggtcacagacttggaag--aaag----------------cgtgtc------------------tttgatctatcctaactcagtctctcctaagatatgaagccttgtgcaataccttt-aatctgcctgagcgttagttttcttagctgccaagtgcagttaataattcttgatctgttttgc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031509 190 - 14256875 CAGTGTCATCCGTTCCTAGAAACAGGCag-gcactgtgg---agg--------------------------------------------------aa-ggtcataggctcagaag--aaag----------------cgtacc------------------tttcatcagccctaagtcagtctctcctgagatctgcagtcttgtgtggttccctt-aatctgcctgagtattagttttcttagctgcagaatggaattaatcattcttgatctgtttcac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920523 191 - 2196201 CAGCGCCATCCTTTCCTAGAAACAGGCGGCGCACTGGGG---AGG--------------------------------------------------AA-GGTCACAGGCTCAGAAG--AAAG----------------CGCATC------------------TTCGATCagtcctcactcagtctctcctgagatccgcggtcttgtgcggttccctt-aatgtgcctgagtattagttttcttagctgcaaaatggaattaataattcttgatctgtttcac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3313854 191 - 5030052 CAGTGTCATCCTTTCCTAGAAACaggcagcgcactgtgg---agg--------------------------------------------------aa-ggtcatagactcagaag--aaag----------------cgtatc------------------ttcgatcagtccaaactcagtctctcctgagattcgcagtcttgtgcaggtccctt-catccgcctgagtattagttttcttagctgcaaaatggaattaataattcttgacctgtttCAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448235 193 - 93316391 GAACATCGTCCTTCTTTAGAAATaggctgtatgacgtggt--tgg--------------------------------------------------aaagatcacagaatcagaagt-aaag----------------catatc------------------tttgataaatcctaactcagtcacttctaagctatgcagcc-tgtgaaataccctt-aatccatctgagcattagttttcttagctgtaaaacagagttaataatttttgatctgtttcat i micMur3.chr14 C 0 I 10 s otoGar3.GL873580 11151404 179 - 11315646 GAGTGCAGTCCTCCTTTAGAAATaggctgtatgatgttgtggtgg--------------------------------------------------aaag--------accagaagt-aaag----------------ca-atc------------------cctgat-gatcttacctcaatcagttttaa--tttgtagccttatacaatgcc------ttcatctgagtattcgttttcttagttgtaaaacggagttaataattcttgttctgctccat i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86473921 277 - 129401213 AGACATTGTCCTTCTTTAGAACTAGACAACATGCAGAGA---TGGCCAAGACAATGCTATTTAGCCAAATCATATGGCAATGCATTCTTCTAGCAAATGTTTCCAAATGCACAAG--AAAGGAAAGTGTGAGATTCACAGGTTCTCACACACACAAAAGAGTTCAATATATCCATTTGCAAccacttgtaagatgtatggctttgtgtaattcacttaaatctctctgagaattaattttcttaaatgcaaaatggaattagtaggttttagcctgttctac i mm10.chr8 C 0 C 0 s canFam3.chr16 16843447 168 - 59632846 AAGCATCATCCTCTTTTAGAGGTaggtgacataatacag---tag--------------------------------------------------aaggatcagaggatgggaagcaaaga----------------aatctc------------------tttgacaaattttaactcactacct-gtaagaaaggagacttcatgcatgtccctt-aacctgtcggag-------------------------gaattaataattcttgttctgttttac i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1334310 180 - 2520184 -------CTTCTTTCTTATAAACAGGcagcatattatag---tgg--------------------------------------------------ct-aatcacgggtcaaaagc--aaag----------------aatttc------------------tttgatacg----atttcaacaacttataagatacatagctgtgtgcaattgtttt-aacccttctggacatgagtttccttagctacaaaatggggttaagcctacttgatctgtttcac i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3861730 341 + 3993831 I a score=45905.000000 s hg38.chr4_KI270789v1_alt 526 6 + 205944 aaatat s panTro5.chr4 192788502 6 + 194502333 aaatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677296 6 + 195804263 aaatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714561 6 + 4876863 AAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600554 6 + 115148730 aaatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883057 6 + 190429646 aaatat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830506 6 + 189454096 aaatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211667 6 - 25927173 aaatat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246070 6 + 4669795 aaatat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203377 6 + 135778131 aaatat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633852 6 - 2847728 aaatat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765927 6 + 2368649 aaatat i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031699 6 - 14256875 aaatac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920714 6 - 2196201 aaatac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314045 6 - 5030052 AAATAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11151584 5 - 11315646 aagga- i otoGar3.GL873580 I 1 I 4 s mm10.chr8 86474198 6 - 129401213 aaaggg i mm10.chr8 C 0 C 0 s canFam3.chr16 16843615 6 - 59632846 aaattg i canFam3.chr16 C 0 I 4 s dasNov3.JH570353 1334490 3 - 2520184 aaa--- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3861730 341 + 3993831 I e micMur3.chr14 17448428 10 - 93316391 I a score=1103276.000000 s hg38.chr4_KI270789v1_alt 532 98 + 205944 gtcataagaa----taaagaaat--atgaactaaaatgttttgacaatgATGGATTATCTAAATACCAACCATGCTTGTAGATGTTCTTAAAGTTC--------------A-TATCAAA s panTro5.chr4 192788508 98 + 194502333 gtcataagaa----taaagaaat--atgaactaaaatgttttgacaatgATGGATTATCTAAATACCAACCATGCTTGTAGATGTTCTTAAAGTTC--------------A-TATCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677302 98 + 195804263 gtcataagaa----taaagaaat--atgaactaaaatgttttgacaatgATGGATTATCTAAATACCAACCATGCTTGTAGATGTTCTTAAAGTTC--------------A-TATCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714567 98 + 4876863 GTCATAAGAA----TAAAGAAAT--ATGAACTAAAATGTTTTGACAATGATGGATTATCTAAATACCAACCATACTTGTAGATGTTCTTAAAGTTC--------------A-TATCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600560 98 + 115148730 gtcatatgaa----tgaagaaat--aggaactaaaatgttttgacaatgATGGATTATCTAAATACCAACCATGCTTGTAGATGCTCTTAAAGTTC--------------A-TATCAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883063 98 + 190429646 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACTGTGCTTGTCAGCGTTCTTAAAGTTC--------------A-TATCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830512 98 + 189454096 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACTGTGCTTGTCAGCGTTCTTAAAGTTC--------------A-TATCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211673 98 - 25927173 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACTGTGCTTGTCAGCGTTCTTAAAGTTC--------------A-TATCAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246076 98 + 4669795 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACTGTGCTTGTCAACGTTCTTAAAGTTC--------------A-TATCAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203383 98 + 135778131 gtcataagaa----taaagaagt--atgaactaaaatgtgtTGACAATGATGGGTTATCTAAATACCAACCATGCTTGTCGACGTTCTTAAAGTTC--------------A-TATCAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633858 98 - 2847728 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACTGTGCTTGTCAACGTTCTTAAAGTTC--------------A-TATCAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 765933 99 + 2368649 gtcataagaa----taaagaaat--aTGAACTAAAATGTGTTGACAATGATGGGTTATCTAAATACCAACCATGCTTGTCGACGTTCTTAAAGTTC--------------ATTATCAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031705 82 - 14256875 gt--------------------t--atgaACTAAAATGTTTTGAAAATGATGGATTACCTAAATACCAGCCATGATTGTAGATATTCTTAAAGTTG--------------A-TATCAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920720 92 - 2196201 atagtaagaa----taaagaaat--aGGAACTAAAATGTTTTGAAAATGACAGATTACTTAAATCCCAGCCATCATTGTGGA------TAAAGCTG--------------A-TGTCAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314051 98 - 5030052 GTAGTAAAAA----TAAAGAAAT--ATGAACTAAGATGTTTTGAAAATGACGGATTACCTAAATACCAGCCATGATTGTAGATATTCTTAAAGTTG--------------A-TATCAGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448438 98 - 93316391 gttgtgagaa----taaagaaat--ataaattaaaatgttttgaaaattaaggattatttaaataccagccattattatAGATGTTCTTAAGGTCG--------------A-TATCAAA i micMur3.chr14 I 10 I 74 s otoGar3.GL873580 11151593 98 - 11315646 attgtgataa----taaagaagt--ctaaactaaaatgttttgaaaatggaggattctttaaatatcagccattattaCAGATGTTCTTAAGGGTA--------------A-TATCAAA i otoGar3.GL873580 I 4 I 30 s mm10.chr8 86474204 98 - 129401213 --gatagcta----tgagaaaataaatcaattaaaatgtttagaacaTGATGGATTATCTAAATACCAGACATTATTAGAGATCCCATTAAGGTTA--------------A-TAGCAAA i mm10.chr8 C 0 I 19 s canFam3.chr16 16843625 116 - 59632846 gttgtgagaattttttaaaaagt--aaaaagtaaagcgttttgaaaatgttggactatttaaattcaagccattattatAGACATTTTAAAGGTCTCTGGAATTCCTAAGA-TAGTTAA i canFam3.chr16 I 4 C 0 s dasNov3.JH570353 1334493 97 - 2520184 gttgtgagaa----taaggaagt--gtgcatttagaTGCTGTGAATATGGTGGAATATTTAAATACCAGCCATTATTGCAGATGTTC-TGAAGTTA--------------A-CATTGAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3861730 341 + 3993831 I a score=51965.000000 s hg38.chr4_KI270789v1_alt 630 10 + 205944 -------------------------------------------------------------GGGGTTAG----------------------------------------GA s panTro5.chr4 192788606 10 + 194502333 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677400 10 + 195804263 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714665 10 + 4876863 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600658 10 + 115148730 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883161 10 + 190429646 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830610 10 + 189454096 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211771 10 - 25927173 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246174 10 + 4669795 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203481 10 + 135778131 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633956 10 - 2847728 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766032 10 + 2368649 -------------------------------------------------------------GGGGTTAG----------------------------------------GA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031787 10 - 14256875 -------------------------------------------------------------GAGATTAG----------------------------------------GA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920812 10 - 2196201 -------------------------------------------------------------GAGATTAG----------------------------------------GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314149 10 - 5030052 -------------------------------------------------------------GAGATTAG----------------------------------------GA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11151721 10 - 11315646 -------------------------------------------------------------AAAATTAA----------------------------------------GA i otoGar3.GL873580 I 30 I 40 s mm10.chr8 86474321 50 - 129401213 -------------------------------------------------------------AGGATTAGTTAAAATGAACATGCTTTTCTGCTTCATATCCATACACAAGA i mm10.chr8 I 19 C 0 s canFam3.chr16 16843741 9 - 59632846 --------------------------------------------------------------AAGTTAT----------------------------------------GA i canFam3.chr16 C 0 I 30 s dasNov3.JH570353 1334590 71 - 2520184 GAGATCTTTCTGGAACCCTAAGATAGTTAAAAGCTTCAACTCGTTTTCTTCCTGCCTCTCAGAGTCCAG----------------------------------------GA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3861730 341 + 3993831 I e micMur3.chr14 17448536 74 - 93316391 I a score=1555872.000000 s hg38.chr4_KI270789v1_alt 640 122 + 205944 GAAATGATAAAGGATTACTCTAGGTTTGCTTTTTATTCAGGTATTTATTC--AT--GTGGTTGAACATCTTAAAGCCGAAGAAAGAGTAAAATGCTGGTGAAAACT---------------------------------------CAGGTATTATTTTCTGTATC s panTro5.chr4 192788616 122 + 194502333 GAAATGATAAAGGATTACTCTAGGTTTGCTTTTTATTGAGGTATTTATTC--AT--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGGTGTTATTTTCTGTATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677410 122 + 195804263 GAAATGATAAAGGATTACTCTAGGTTTGCTTTTTATTGAGGTATTTATTC--AT--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGGTGTTATTTTCTGTATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714675 122 + 4876863 GAAATGATAAAGGATTACTCTAGGTTTGCTTTTTATTCAGGTATTTATTC--AT--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGGTATTATTTTCTGTATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600668 122 + 115148730 GAAATGATAAAGGATTATTCTAGGTTTGCTTTTTATTCAGGTATTTATTC--AT--GTGGTTAAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TCGGTATTATTTTCTGTATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883171 119 + 190429646 GAAATGAT---GGATTATTTCAGGGTTGCTTTTTATTCAGGTATTGATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830620 119 + 189454096 GAAATGAT---GGATTATTTCAGGGTTGCTTTTTATTCAGGTATTGATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211781 119 - 25927173 GAAATGAT---GGATTATTTCAGGGTTGCTTTTTATTCAGGTATTGATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246184 119 + 4669795 GAAATGAA---GGATTATTTCAGGGTTGCTTTTTATTCAGGTATTTATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203491 122 + 135778131 GAAATGATGAAGGATTATTTCAGGGTTGCTTTTTATTCAGGTATTTATTC--AC--TTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2633966 122 - 2847728 GCAATGATGAAGGATTATTTCAGGGTTGCTTTTTATTCAGGTATTTATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766042 122 + 2368649 GAAATGATGAAGGATTATTTCAGGGTTGCTTTTTATTCAGGTATTTATTT--AC--GTGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATATTATTTTCTGTGTC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031797 122 - 14256875 GGAATGATAAAGGGTTATTTTAGGTTTGCTTTTTATTCAGGTATTTGTTC--AC--ATGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATGCTGGTGAAAACT---------------------------------------TAGATAGTCTTTGCTGTGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920822 118 - 2196201 G----GATGAAGGGTTATTTTAGGTTTGCCTTTTATTCAGGTATTTGTTC--AC--ATGGTTGAACATCTTAAAGCCAAAGAAAGAGTAAGATCCTGGCGAAGACT---------------------------------------TAGATAGTGTTTGCCGTATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314159 116 - 5030052 GAAATGATAAAGGGTTATTTTAGGTTTGCTTTTTATTCAGGTATTTGTTC--AC--ATGCTTGAACATCTTAAAGCCAAAG--AGAGTAAGACGCTGGCGAAAAC-------------------------------------------GTAGTGTTTGCTGTGTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448610 124 - 93316391 GAAATGATAAAGGATTATTTTAGATTTGCTTTTTATTCAGGTATTTAGTC--ACATGTGCTTGAGCATCTTAAAGACAAAGGAAGGGTAATACGCTGGTGCAAACT---------------------------------------GAGATATAATTTTCTATATT i micMur3.chr14 I 74 C 0 s proCoq1.NW_012145301v1 3862071 124 + 3993831 GAAATGATAAAGGATTATTTTAGATTTTCTTTTTATTCAGGTATTTAGTC--ACATGTGTTTGAGCTTCTTAAAGACAAAGGAAGGGTAAGATACTGATGCAAACT---------------------------------------GAGATATTATTTTCTGTATC i proCoq1.NW_012145301v1 I 341 C 0 s otoGar3.GL873580 11151771 122 - 11315646 GATATGATAAAGGATTATTTTAAGTTTCGTTTTTA-TCAGGTATTTAGTC--ACATGTGTTTGAGCATCGTAGAGACAAAGGAAGGGTAAGATGTTGGTA-AAATA---------------------------------------CAGATATGATTTTCTGTATT i otoGar3.GL873580 I 40 C 0 s mm10.chr8 86474371 123 - 129401213 GGAACTATGAAGGTTTCTTTCAGGTTGGCTCTCT-TTTAGGTATTTATTCCTAT--GTGTCTGTAGGCCTTAAAGCCAGAGGAATAATAAAACTCTAGTGAAAACT---------------------------------------TAGATAATTACTTGTGTATC i mm10.chr8 C 0 C 0 s canFam3.chr16 16843780 118 - 59632846 GAAATTATGAAGGATTATTTTAAGTTTGCTTTTTATTTAGATATTTATAC--AC--ACATTTGAGCATCTTAAAG-CAAAGGAAGGGTGAGATGCTGGTGATAACT---------------------------------------TAAATA---TTTTCTGTACC i canFam3.chr16 I 30 C 0 s dasNov3.JH570353 1334661 161 - 2520184 GAAACGGTAGAGGGTTACTTGGGGTTAGCTTTTTATTCAGGTATTAATCA-GAC--ATGCTTGAGTGTATTAAAGCGAGAGG-AGAGAAACATTTTAGTAAAAATTGCTGCCTGAACAGTCTTTGAAGGAGATTAGCAGAGAAAACACCTGTGATTTTTTGCTTC i dasNov3.JH570353 C 0 I 507 a score=266775.000000 s hg38.chr4_KI270789v1_alt 762 30 + 205944 ACTGGATGCTAGAAATGATTACTGGAA--------------------------------------------------------------------------AA-A s panTro5.chr4 192788738 30 + 194502333 ACTGGATGCTAGAAATGATTATTGGAA--------------------------------------------------------------------------AA-A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677532 30 + 195804263 ACTGGATGCTAGAAATGATTATTGGAA--------------------------------------------------------------------------AA-A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714797 30 + 4876863 ACTGGATGCTAGAAATGATTATTGGAA--------------------------------------------------------------------------AA-A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600790 30 + 115148730 ACTGGATGCTAGAAATGCTTACTGGAA--------------------------------------------------------------------------AA-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883290 30 + 190429646 ACTGGATGCTAGAAACAATTATTGGAA--------------------------------------------------------------------------AA-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830739 30 + 189454096 ACTGGATGCTAGAAACAATTATTGGAA--------------------------------------------------------------------------AA-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211900 30 - 25927173 ACTGGATGCTAGAAACAATTATTGGAA--------------------------------------------------------------------------AA-A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246303 30 + 4669795 ACTGGATGCTAGAAACAATTATTGGAA--------------------------------------------------------------------------AA-A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203613 30 + 135778131 ACTGGATGCTAGAAACGATTATTGGAA--------------------------------------------------------------------------AA-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634088 30 - 2847728 ACTGGATGCTAGAAACAATTATTGGAA--------------------------------------------------------------------------AA-A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766164 30 + 2368649 ACTGGATGCTAGAAATGATTATTGGAA--------------------------------------------------------------------------AA-A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031919 30 - 14256875 ACTGGATGCTGGAAATGATTACTGGAA--------------------------------------------------------------------------AG-A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920940 30 - 2196201 ACTGGATGCTGGAAACGATTGCTGGGA--------------------------------------------------------------------------AG-A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314275 17 - 5030052 ACTGGATGCTGGAAATG---------------------------------------------------------------------------------------- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448734 29 - 93316391 GCTGCATACTAGAAATAATTATTGATT--------------------------------------------------------------------------AA-- i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862195 30 + 3993831 ACTGCATACTAGAAATAATTATTGGTG--------------------------------------------------------------------------AAA- i proCoq1.NW_012145301v1 C 0 I 16 s otoGar3.GL873580 11151893 103 - 11315646 ACTGAATACTGGAAATAATTATTGATGAtttttttttttgagatagagtctcactatgtccccttggtagagtgtgtggcatcacagctcaccgcaacctcaa-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86474494 29 - 129401213 ACTAGATGCAAGAGATGATAAATGGCA--------------------------------------------------------------------------AA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16843898 30 - 59632846 ACTGAATGCTAGATAAGATTATTGGTG--------------------------------------------------------------------------AT-A i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1334822 507 - 2520184 I a score=66127.000000 s hg38.chr4_KI270789v1_alt 792 6 + 205944 ACTCTT s panTro5.chr4 192788768 6 + 194502333 ACTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677562 6 + 195804263 ACTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714827 6 + 4876863 ACTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600820 6 + 115148730 ACTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883320 6 + 190429646 ACTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830769 6 + 189454096 ACTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211930 6 - 25927173 ACTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246333 6 + 4669795 ACTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203643 6 + 135778131 ACTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634118 6 - 2847728 ACTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766194 6 + 2368649 ACTCTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031949 6 - 14256875 ACTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920970 6 - 2196201 ACTTTT i cebCap1.NW_016107886v1 C 0 C 0 s micMur3.chr14 17448763 6 - 93316391 ATTTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11151996 6 - 11315646 actctt i otoGar3.GL873580 C 0 I 211 s mm10.chr8 86474523 6 - 129401213 ACATTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16843928 5 - 59632846 -CTTTT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3862225 16 + 3993831 I e dasNov3.JH570353 1334822 507 - 2520184 I e aotNan1.NW_018492112v1 3314292 0 - 5030052 C a score=89199.000000 s hg38.chr4_KI270789v1_alt 798 11 + 205944 TAATGAAACAT s panTro5.chr4 192788774 11 + 194502333 TAATGAAACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677568 11 + 195804263 TAATGAAACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714833 11 + 4876863 TAATGAAACAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600826 11 + 115148730 TAGTGAAACAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883326 11 + 190429646 TAATAAAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830775 11 + 189454096 TAATAAAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211936 11 - 25927173 TAATAAAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246339 11 + 4669795 TAATAAAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203649 11 + 135778131 TAATAAAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634124 11 - 2847728 TAATAAAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766200 11 + 2368649 TAATAAAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031955 11 - 14256875 TCATAAAACAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920976 11 - 2196201 TCATAAAACAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314292 9 - 5030052 --ATAAAACAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448769 11 - 93316391 AAATAAAAATT i micMur3.chr14 C 0 C 0 s mm10.chr8 86474529 10 - 129401213 -GAGGGAAAAT i mm10.chr8 C 0 I 1 s canFam3.chr16 16843933 11 - 59632846 TCTTAAAAATT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3862225 16 + 3993831 I e dasNov3.JH570353 1334822 507 - 2520184 I e otoGar3.GL873580 11152002 211 - 11315646 I a score=31235.000000 s hg38.chr4_KI270789v1_alt 809 3 + 205944 GCT s panTro5.chr4 192788785 3 + 194502333 GCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677579 3 + 195804263 GCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714844 3 + 4876863 GCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600837 3 + 115148730 GCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883337 3 + 190429646 GCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830786 3 + 189454096 GCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211947 3 - 25927173 GCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246350 3 + 4669795 GCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203660 3 + 135778131 GCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634135 3 - 2847728 GCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766211 3 + 2368649 GCT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031966 3 - 14256875 GCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920987 3 - 2196201 GCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314301 3 - 5030052 GCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448780 3 - 93316391 GAT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862241 3 + 3993831 GAT i proCoq1.NW_012145301v1 I 16 C 0 s mm10.chr8 86474540 3 - 129401213 GTT i mm10.chr8 I 1 C 0 s canFam3.chr16 16843944 3 - 59632846 GTT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1334822 507 - 2520184 I e otoGar3.GL873580 11152002 211 - 11315646 I a score=2300524.000000 s hg38.chr4_KI270789v1_alt 812 193 + 205944 ACCTGAACACTCCAGGAGGGAGATGAGCAGAGGAAAATGTCTTTGGCCTTTTC-------------------CCCAGTGAAGCCT-GATCCTTTATGACTTGGCTTTCATCGATATTTTGCGCACTCAACAG---------AGACCCTCAAATATG---TTTATTGAGAATTCACTGTGAAAACCGCACTCCCTTAGGCACTGTGTGA-------AAGGGAAAGAAAAGAAG s panTro5.chr4 192788788 193 + 194502333 ACCTGAACACTCCAGGAGGGAGATGAGCAGAAGAAAATGTCTTTGGCCTTTTC-------------------CCCAGTGAAGCCT-GATCCTTTATGACTTGGCTTTCATCGATATTTTGTGCACTCAACAG---------AGACCCTCAAATATG---TTTATTGAGAATTCACTGTGAAAACCGCACTCCCTTAGGCACTGTGTGA-------AAGGGAAAGAAAAGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677582 193 + 195804263 ACCTGAACACTCCAGGAGGGAGATGAGCAGAAGAAAATGTCTTTGGCCTTTTC-------------------CCCAGTGAAGCCT-GATCCTTTATGACTTGGCTTTCATCGATATTTTGTGCACTCAACAG---------AGACCCTcaaatatg---tttattgagaattcactgtgaaaaccgcactcccttaggcactgtgtga-------aagggaaagaaAAGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3714847 193 + 4876863 ACCTGAACACTCCAGGAGGGAGATGAGCAGAGGAAAATGTCTTTGGCCTTTTC-------------------CCCAGTGAAGCCT-GATCCTTTATGACTTGGCTTTCATCGATATTTTGTGCACTCAACAG---------AGACCCTCAAATATG---CTTATTGAGAATTCACTGTGAAAACCGCACTCCCTTAGGCACTGTGTGA-------AAGGGAAAGAAAAGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112600840 193 + 115148730 ACCTGAACACTCCAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTTC-------------------ACCAGTGAAGCCCGGATCCTTTATGACTTGGCTTTCATTGATATTTTGTGCACTCAACAG---------AGACCCTCAAATATG---TTTATTGAGAATTCACTGTGAAAACTGCACTCCCTTGGGCACCGTGTGA-------AAGGG-AAGGAAAGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883340 193 + 190429646 ACCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTCGTCGATATTTTGTGCACTCAATGA---------AGATCCTCAAATGTG---TTTTTTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830789 193 + 189454096 ACCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTTGTCAATATTTTGTGCACTCAATGA---------AGATCCTCAAATGTG---TTTATTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24211950 193 - 25927173 ACCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTCGTCGATATTTTGTGCACTCAATGA---------AGATCCTCAAATGTG---TTTATTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246353 193 + 4669795 TCCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGCCTTTCGTCGATACTTTGTGCACTCAGTGA---------AGATCCTCAAATGTG---TTTATTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203663 193 + 135778131 ACCTGAGCACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTCGTTGATATTTTGTGCACTCAGTGA---------AGATCCTCAAATGTG---TTTATTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634138 193 - 2847728 ACCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTCGTCGATACTTTGTGCACTCAGTGA---------AGATCCTCAAATGTG---TTTATTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766214 189 + 2368649 ACCTGAACACTCTAGGAGGGAGATTAGCAGAGGAAAATGTCTTTGGCCTTTCC-------------------ACCAGTGAAGCCTGGATCCTTTATGACTTGGCTTTTATCGATATTTTGTGCACTCAATGA---------AGACCCTCAAATGTG-------TTGAGAATTCACTGTGAAAA-TGCACTCCCTAAGGCACTGCGTGA-------GGGGGAAAGAAAAGAAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13031969 194 - 14256875 ACCTGAACACCCTGTGAGGGAGATTAGCAGAGGAAAATATCTCTGGCTTTTTC-------------------ATCAGTGAAGGCTGGACTCTTTATGACTTGGCTTTAATTGATATTTTGTGTACTCCACAG---------AGACCCTCGAATATG---TGTATTGAGAATTCACTGTGAAAACCGCCCTCGCTCAGGCACGGTGTGA-------AGGGGAAAGGAAAGCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 920990 193 - 2196201 ACCTGAACACCCTGTGAGGGAGACTGGCAGAGGAAAATGTCTCCGGCTTTTTC-------------------ATCAGTGAAGCCTGGACTCTTGATGACTTGGCTTTAATCGATATTTTGTGTACTCTGCAG---------AGACCCTCGAATATG---TGTATCGAGAATTCACTGTGAAAACTGCCCTCGCTCAGGCAC-GTGTGA-------AGGGGAAAGGAAAGCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314304 194 - 5030052 ACCTGAACACCCTGTGAGGGAGATTAGCAGAGGAAAATGTCTCTGGCTTTTTC-------------------ATCAGTGAAGCCTGGACTCTTTATGACTTGGCTTTAATCGATATTTTGTGTACTCCATGG---------AGACCCTCGAATATG---TGTATTGAGAATTCACTGTGAAAACTGCCCTCGCTCAGGCACGGTGTGA-------AAGGGACAGGAAAGCAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448783 195 - 93316391 ACCTGAACACTCCATGAGGGCGATTAGCAGAGGAAAATGTCTTTGGCTTTTTC------------------GGTCAGTGAAGCATGTATCCTTTATGACTTGGTCTGAATCGATATTTTGTGCACTGAACAC---------AGACCCTTCGATGTG---TTTACTGAGAATTCATTGTGAAAACTGTACTGCCTTAGGCACTATGAGA-------AAGGGAAAGAAAAAAGG i micMur3.chr14 C 0 I 2 s proCoq1.NW_012145301v1 3862244 195 + 3993831 ACCTGAACACTCTATGAGGGAGATTAGCAGAGGAATATGTCTTTAGCTTTTTT------------------GGTCAGCGAAGCATGTATCCTTTATGACTTGGTCTGAATCGATATTTTGTGCACTGAACAC---------AGACCCTCCAATGTG---ATTATTGAGAATTCGTTGTGAAAACTGTACTGCCTTAGGCATTATGTGA-------AAGGGAAAGAAAAAAAG i proCoq1.NW_012145301v1 C 0 I 70 s otoGar3.GL873580 11152213 193 - 11315646 ACTTGAACTCGGTAGAAGAGAGATTAGCAGAGGAAAACGCCTTTGGCTTTTTC-------------------ATCAGCGAAACATGTACCCTTTATGACTTGATCTGAATCAATATTTTGTGCACTGAACGC---------AGACCCT-AAATATG---TTTATTGGGACTTTGTTGTGCAAACTTTATTGCCTTTGGCACTACGTGA-------AAGAGAAAGAGAAAAAG i otoGar3.GL873580 I 211 I 3 s mm10.chr8 86474543 204 - 129401213 TTCCAAATACTCTCAGAGGGAGATTAGCAGAGGAA-ATGTATTTGTTTTTTTGTTTTGTTTTGTTTTTTTAAATCAATGAAA--TGTGTCTTTTTGGATGCATCCTT----AATGTCTCATGCACTCATCAG---------AGATCCTCAAACAT-----TTATTAGGTAT----TATGAAAAGTGTATTTTCTTGGCCCCTGTACGATG---AGAATGGAGAGATAAGAAC i mm10.chr8 C 0 I 2 s canFam3.chr16 16843947 209 - 59632846 CCCTGAATACTCTTTGAGGGAGAATAGCA---GGAAATGTCTTTA-CTTTTTC-------------------ATCAGTGAAGTACAAATCCTTTTTGAATTGGCCTTAGTAAATGTGTTGCTCATTCAACAGAAATAACAAAGACTCTCAAATATGATATATGTTGAGTACTCATTGTGAATACTGCATTGACTTAGGCACTGTGTGGAAGGTAGAGGGGAAAAAAAAGAAT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1334822 507 - 2520184 I a score=44412.000000 s hg38.chr4_KI270789v1_alt 1005 5 + 205944 GATGT s panTro5.chr4 192788981 5 + 194502333 GATGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677775 5 + 195804263 GATGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715040 5 + 4876863 GATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601033 5 + 115148730 GATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883533 5 + 190429646 GATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830982 5 + 189454096 GATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212143 5 - 25927173 GATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246546 5 + 4669795 GATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203856 5 + 135778131 GATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634331 5 - 2847728 GATGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766403 5 + 2368649 GATGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032163 5 - 14256875 GAAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921183 3 - 2196201 GA--T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314498 5 - 5030052 GGTGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17448980 5 - 93316391 GTTGT i micMur3.chr14 I 2 C 0 s otoGar3.GL873580 11152409 5 - 11315646 GTTGT i otoGar3.GL873580 I 3 C 0 s mm10.chr8 86474749 5 - 129401213 GGTTA i mm10.chr8 I 2 C 0 s canFam3.chr16 16844156 5 - 59632846 GTTGT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3862439 70 + 3993831 I e dasNov3.JH570353 1334822 507 - 2520184 I a score=602898.000000 s hg38.chr4_KI270789v1_alt 1010 61 + 205944 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGCTTCTACTCAGCCTGGTATGATTCCAAGC s panTro5.chr4 192788986 61 + 194502333 GAGAAAGAGGGATGTTTACGCGCTTTCT-----------------AGAGCTTCTACTCAGCCTGGTATGATTCCAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677780 61 + 195804263 GAGAAAGAGGGATGTTTACGCGCTTTCT-----------------AGAGCTTCTACTCAGCCTGGTATGATTCCAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715045 61 + 4876863 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGCTTCTACTCAGCCTGGTATGATTCCAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601038 61 + 115148730 GAGAAAGAGGGCTGTTCATGTGCTTTGC-----------------AGAGCTTCTCCTCGGCCTGGTGTAATTCCAGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883538 61 + 190429646 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGTTTCTACTCAGCCTGTCATAACTCCAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187830987 61 + 189454096 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGTTTCTACTCAGCCTGTCATAACTCCAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212148 61 - 25927173 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGTTTCTACTCAGCCTGTCATAACTCCAAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246551 61 + 4669795 GAGAAAGAGGGATGTTTATGCACTTTCT-----------------AGAGTTTCTACTCAGCCTGTCATAACTCCAAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203861 61 + 135778131 GAGAAAGAGGGATGTTTATGCGCTTTCT-----------------AGAGTTTCTACTTAGGCTGTCATAACTCCAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634336 61 - 2847728 GAGAAAGAGGGATGTTTATGCACTTTCT-----------------AGAGTTTCTACTCAGCCTGTCATAACTCCAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766408 59 + 2368649 AAGAA--AGGGATGTTTATGCACCTTCT-----------------AGAGTTTCTAGTCAGCCTGTCCTAACTCCAAGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032168 60 - 14256875 GGGAGGGGG-AATGTTTCTGTGCCTTCT-----------------AGAGTTTCTGCTCAGCCTGCAGCCGTTCCAAGT i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 921186 61 - 2196201 GAGAGGGAGCAATGTTTCTGTGCTTTCT-----------------AGAGCTTCCGCTCAGCCTGCAGTCGTTCCGAGT i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3314503 61 - 5030052 GAGAGGGAGGAACGTTCATGCGCTTTCT-----------------AGAGTTTCTACTCAGCCTGCAGTCGTTCCAAGT i aotNan1.NW_018492112v1 C 0 I 1 s micMur3.chr14 17448985 61 - 93316391 GAGTAAGGAGGACTTTTATGAGCTTTCT-----------------AGAGTTTCGATTAAGCATGTTATAAATCTAAAC i micMur3.chr14 C 0 I 1 s otoGar3.GL873580 11152414 61 - 11315646 AGGAAAAGAGGACATTTAGGAGCTTTCC-----------------AGAGTTTCAGTTAAGCCTATTAGAATTCCAAAC i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86474754 61 - 129401213 AAGCAAGAAAGATTCTTATGTGCATTCT-----------------TCACTCTCAGATAAACATGCTCTAAATCCAAGC i mm10.chr8 C 0 I 1 s canFam3.chr16 16844161 78 - 59632846 GAGTAAAGAGGATGCTTATGAGCTTTCTAGTGTTTCAATTAATTAAGAGTTTTAATTAAAAACATTATAATTCCAAGC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1335329 61 - 2520184 AGGTAATGAGGAAGTCTATGAACTTTCT-----------------AGTTTTTCAGACAAGCAGGGTATTACTCCTGGC i dasNov3.JH570353 I 507 C 0 e proCoq1.NW_012145301v1 3862439 70 + 3993831 I a score=1454570.000000 s hg38.chr4_KI270789v1_alt 1071 108 + 205944 -AGACATTTACTGTGTTACACAGATGCTATATCAGGTTCTGGAAGAAGTTTTCCTCCATAAAGATAACTTGCATCCTAATTGTGTTACCATGTCAC-TTAAATAGCTTCT s panTro5.chr4 192789047 108 + 194502333 -AGACATTTACTGTGTTACACAGATGCTATATCAGGTTCTGGAAGAAGTTTTCCTCCATAAAGATAACTTCCATCCTAATTGTGTTACCATGTCAC-TTAAATAGCTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677841 108 + 195804263 -AGACATTTACTGTGTTACACAGATGCTATATCAGGTTCTGGAAGAAGTTTTCCTCCATAAAGATAACTTCCATCCTAATTGTGTTACCATGTCAC-TTAAATAGCTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715106 108 + 4876863 -AGACATTTACTGTGTGACACAGATGCTATATCAGGTTCTGGAAGAAGTTTTCCTCCATAAAGATAACTTCCATCCTAATTGTGTTACCATGTCAC-TTAAATAGCTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601099 108 + 115148730 -AGACATTTACTGTGTTACACAGGTGCTCTCTCAGGTTCTGGAAGAAGTTTTCCTCTGTAAACAGAACTTCCACCCTAATTGTGTTACCATGTCAC-TTAAATAGCTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883599 108 + 190429646 -AGACGTTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTCTCCTCCATAAAGATAACTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGCTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831048 108 + 189454096 -AGACGTTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTCTCCTCCATAAAGATAACTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGCTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212209 108 - 25927173 -AGACGTTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTCTCCTCCATAAAGATAACTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGCTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246612 108 + 4669795 -AGACATTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTTTCCTCCATAAAGATAGCTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGGTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134203922 108 + 135778131 -AGACATTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTTTCCTCCGTAAAGATAACTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGCTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634397 108 - 2847728 -AGACACTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTTTCCTCCATAAAGATAACTTCCATCCTAATTGTATTACCATGTCAC-TTAAATAGCTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766467 108 + 2368649 -AGACATTTACTGTGTTACACAGATGCTATCTCAGGTTCTGGAGGAAGTTTTCCTCCATAAAGATAACTTCCATCCTAATTGTATTACCATGTCTC-TTAAATAGCTTCT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032229 106 - 14256875 -AGACATT--CTGTGTTACACAGATGCTCTCTCAGGTTCCGGAAGAAGTTTTCCTCCATCAGGACAACTTCCATCCTAGTTGTGTTACCATGTCAC-CTAAATAGCTTCT i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 921248 108 - 2196201 -ACACATTCGCGGTGTTACACAGATGCTCTCTCAGGTTCTGGAGGGAGTTTTCCTCCACCAGGACAACTTCCATCCTAGTTGTGTTACCATGTCAC-CTAAATAGCTTCT i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3314565 108 - 5030052 -AGGCATTCACTGTGTTGCACAGATGCTCTCTCAGGTTCTGGAAGAAGTTTTCCTCCATCAGGACAACTTCCACCCTAGTTGTGTTACCATGTCAC-CTAAATAGCTTCT i aotNan1.NW_018492112v1 I 1 C 0 s micMur3.chr14 17449047 108 - 93316391 -AGGCCTTTACTGTGTTACACAGATGTTATCTTAGGTTCTGGAAAAAGTTTTCCCCCATAATGATAGCTACCATCTTAATTGCGTTAAGATGTCGT-TTAAGTAGCTTCT i micMur3.chr14 I 1 C 0 s proCoq1.NW_012145301v1 3862509 108 + 3993831 -AGGCCTTTACTGTATTACACAGATGTTATCTTAGGTTCTGGAAGAATTTTTCCTCCATCAAGATAGCTGCCATCCTAAGTGTGTTAAGATGTCAT-TTAAGTAGCTTCT i proCoq1.NW_012145301v1 I 70 C 0 s otoGar3.GL873580 11152476 95 - 11315646 -ATATATTTACT-----------ATATTATCTTAGGTTCTGGGAGAAGCTTTCCTCCATAAGGATAGCTGTCATCCTGttatttttaaaa--ttat-ttaaataCCTTTC i otoGar3.GL873580 I 1 I 437 s mm10.chr8 86474816 108 - 129401213 -AGATATTTGCTGCATTACAAAGATGTTGTCTCTGGTTCTCCA-GAAGTATTCCTCCATAAAAATAGCCACCCCTGTAAATGTGCTAAGTTGTTCCAATAAATAGCTTCT i mm10.chr8 I 1 C 0 s canFam3.chr16 16844240 104 - 59632846 -AGACATTTACTAGGTTCCACAGATGCAATCTTAGGTTCTTGAAGAAGTTTCCCTCCGTAAATATAGCTGCCATCCTAATTATGCTAAGAAATCAT-TCAGATAGC---- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1335390 107 - 2520184 AAGGCGTTTATTACATTACGCAGCTGACATTGAAGGTCTTGGAGGAAGCCT--CCCCGTGGCGAGAGCTGCTCTTCTAATTGCCTTAGGAAGCCGT-TCAAGTATCTTCT i dasNov3.JH570353 C 0 C 0 a score=552616.000000 s hg38.chr4_KI270789v1_alt 1179 42 + 205944 ATCAGGGTCATTTCTGCCAGTAACCCTCATAAGGAATCAAGG s panTro5.chr4 192789155 42 + 194502333 ATCAGGGTCATTTCTGCCAGTAACCCTCATAAGGAATCAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677949 42 + 195804263 ATCAGGGTCATTTCTGCCAGTAACCCTCATAAGGAATCAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715214 42 + 4876863 ATCTGGGTCATTTCTGTCAGTAACCCTCATAAGGAATCAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601207 42 + 115148730 ATCAAGGTCATTTCTGCCAGTAACTCCCATGAGGAATCAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883707 42 + 190429646 GTCAGGGTGATTTCTGCCAGTAACCCCCACGAGGAATCAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831156 42 + 189454096 GTCAGGGTGATTTCTGCCAGTAACCCCCACGAGGAATCAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212317 42 - 25927173 GTCAGGGTGATTTCTGCCAGTAACCCCCACGAGGAATCAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246720 42 + 4669795 GTCAGGGTGATTTCTGCCAGTAACCCCCACGAGGAATCAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204030 42 + 135778131 ATCAGGGTCATTTCTGCCAGTAACCCCCATGAGGAATCAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634505 42 - 2847728 GTCAGGGTGATTTCTGCCAGTAACCCCCACGAGGAATCAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766575 42 + 2368649 ATCAGCGTCATTTCTGCCAGTAACCCCCACAAGGAATCAAAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032335 42 - 14256875 ATCAGGGTCGTTTCTGCCCATAACCCCCACGGGGAATCAAGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921356 42 - 2196201 ATCAGGGTTGTTTCTGCCAGTAACCCCCACGAGGCATCAAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314673 42 - 5030052 ATCAGGGTTGTTTCTGCCCGTAACCCCCACGAGGAATCAAGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449155 42 - 93316391 ATGGGGGTCATTTCCGCCAGTAGCTCCAGTGAGGAATCAAGG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862617 42 + 3993831 ATCGGGGTCATTTCTGCCAGTAGCTCCAGGGAGGAGTCAAGG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11153008 42 - 11315646 ATCAAGGTCATTTCTGTCAGTAACCCCGGTGAGGAGTCAAGG i otoGar3.GL873580 I 437 I 1920 s mm10.chr8 86474924 41 - 129401213 ATTGGGATCATTTGTGCCAGTAATCCTGGGGAAGA-TTAAGG i mm10.chr8 C 0 C 0 s canFam3.chr16 16844344 31 - 59632846 -----------TTCTGCCAGTAAACCAGGTGAGGAATCAAGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1335497 26 - 2520184 GTCAGGGT----------------CTAGATGAGGCATCAAGG i dasNov3.JH570353 C 0 C 0 a score=737100.000000 s hg38.chr4_KI270789v1_alt 1221 60 + 205944 ACTCTCTGATGTCAGTAAAGGCAAGATGTCAAGGAAGCTGCACCAACTTTCTTATAAGGA s panTro5.chr4 192789197 60 + 194502333 ACTCTGTGATGTTAGTAAAGGCAAGATGTCAAGGAAGCTGCACCAACTTTCTTATAAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192677991 60 + 195804263 ACTCTGTGATGTTAGTAAAGGCAAGATGTCAAGGAAGCTGCACCAACTTTCTTATAAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715256 60 + 4876863 ACTCTGTGATGTTAGTAAAGGCAAGATGTCAAGGAAGCTGCACCAACTTTCTTATAAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601249 60 + 115148730 ACTCTGTGATGTTAGTAAAGGCAAGATGTCAAGGAAGCTGCACCAACTTTCTTACAAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883749 60 + 190429646 CCTCTGTGATGTTAGCAAAGGCAAGATGTCAGGGAAGCTACACAAACTTTCTTACAAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831198 60 + 189454096 CCTCTGTGATGTTAGCAAAGGCAAGATGTCAGGGAAGCTACACAAACTTTCTTACAAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212359 60 - 25927173 CCTCTGTGATGTTAGCAAAGGCAAGATGTCAGGGAAGCTACACAAACTTTCTTACAAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246762 60 + 4669795 ACTCTGTGATGTTAGCAAAGGCAAGATGTCAAGGAAGCTACACAAACTTTCTTACAAGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204072 60 + 135778131 ACTCTGTGATGTTAGCAAAGGCAAGATGTCAAGGAAGCTGCACAAACTTTCTTACAAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634547 60 - 2847728 ACTCTGTGATGTTAGCAAAGGCAAGATGTCAAGGAAGCTACACAAACTTTCTTACAAGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766617 60 + 2368649 ACTCTGTGATGTTAGCAAAGACAAGATGTCAAGGAAGCTGCACAAACTTTCTTACAAGGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032377 59 - 14256875 ACTCTGTGATGTTAGTAAAGGCAGGATATCAA-AAAGCTGCACCAACTTTCTTATGAGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921398 59 - 2196201 ACTCTGTGGTGTTAGTAAAGGCAAGGTGTCAA-AAAGCCGCACTGACTTTCTTACGAGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314715 59 - 5030052 ACTCTGTGATGTCAGTAAAGGCAAGATGTCAA-AAAGCTGCACCGGCTTTCTTACGAGGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449197 60 - 93316391 ATCCTGCTGTGTTAGTAAGGGCAAGATGTCAAGGAAGCTGAGCTGTCTTTCTTACAAGGA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862659 60 + 3993831 ACTCCGCTCTGTTAGCAAGGGCAAGATGTCAAGGAAGCTGAGCCGTCTTTCTTATAAGGA i proCoq1.NW_012145301v1 C 0 I 17 s otoGar3.GL873580 11154970 60 - 11315646 ACTCCACTGCCTTGGTAAGAGCAAGATGTCAGGGAAGCTGAATCATCTTTCTTGCAAGGA i otoGar3.GL873580 I 1920 C 0 s mm10.chr8 86474965 57 - 129401213 ATTCTGCCAAGATGGAAGAGACAAAA-GACAGAGAACC--CAGCTTTTTCCCCCCTAAGT i mm10.chr8 C 0 I 4 s canFam3.chr16 16844375 51 - 59632846 ACCCTGCTATTTTAGGAGGGGCAAGATGTCAAGG---------CATCCTTCTTCCTAGTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1335523 59 - 2520184 ACACTGCTATTTTAGTAAAGGTGAGATGTGAA-GAAGCTGTGCCAGCTTTCTTATTGGCA i dasNov3.JH570353 C 0 C 0 a score=12845.000000 s hg38.chr4_KI270789v1_alt 1281 6 + 205944 CG--G---GAA s panTro5.chr4 192789257 6 + 194502333 CG--G---GAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678051 6 + 195804263 CG--G---GAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715316 6 + 4876863 CG--G---GAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601309 6 + 115148730 AG--G---GAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883809 6 + 190429646 AG--G---GAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831258 6 + 189454096 AG--G---GAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212419 6 - 25927173 AG--G---GAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246822 6 + 4669795 AG--G---GAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204132 8 + 135778131 AGGAG---GAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634607 6 - 2847728 AG--G---GAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766677 6 + 2368649 AG--G---GAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032436 9 - 14256875 AG--GTAAGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921457 9 - 2196201 CG--GTGAGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314774 9 - 5030052 AG--GTAAGAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449257 6 - 93316391 AG--G---TAA i micMur3.chr14 C 0 I 3 s otoGar3.GL873580 11155030 6 - 11315646 GA--G---TAA i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86475026 6 - 129401213 -----TGAGAA i mm10.chr8 I 4 C 0 s canFam3.chr16 16844426 6 - 59632846 GG--G---TAA i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1335582 6 - 2520184 GG--G---TGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3862719 17 + 3993831 I a score=711374.000000 s hg38.chr4_KI270789v1_alt 1287 64 + 205944 GA---GAATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGTTTTCTCATCA s panTro5.chr4 192789263 60 + 194502333 GA---GAATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGT----TCATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678057 60 + 195804263 GA---GAATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGT----TCATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715322 64 + 4876863 GA---GAATATATATCTCTG-CTTACCCA-------GAGACAAATATTTGAA---------CTTATTTTTCTGTTTTCTCATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601315 64 + 115148730 GA---GAATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGTTTTCGCATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883815 61 + 190429646 GA---GCATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA------------CTTTTTCTGTTTTTGCATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831264 61 + 189454096 GA---GCATATATATCTCTG-CTTACCTA-------AAGACAAATATTTGAA------------CTTTTTCTGTTTTTGCATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212425 61 - 25927173 GA---GCATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA------------CTTTTTCTGTTTTTGCATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246828 61 + 4669795 GA---GCATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA------------CTTTTTCTGTTTTTGCATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204140 64 + 135778131 GA---GCATATATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGTTTTTGCATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634613 61 - 2847728 GA---GCATGTATATCTCTG-CTTACCCA-------AAGACAAATATTTGAA------------CTTTTTCTGTTTTTGCATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766683 64 + 2368649 GA---GCGTATATATCTTTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGTTTTTGCATCA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032445 64 - 14256875 GA---GAATATGTGTCTCTG-CTTACCCA-------AAGACAAATATTTGAA---------CTTCTTTTTCTGTCTTCCTATCG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921466 64 - 2196201 GC---GAACATGTGTCTCTG-CTTACCCA-------GAAACAAATCTGTGAA---------CTTCTTTTCCTGTCTTCCCATCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314783 64 - 5030052 GA---GAATACGTATCTCTG-CTCACCCA-------AAGACAAATGTTTAAA---------CTTCTTTTTCTGTCTTCCCATCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449266 64 - 93316391 GA---GAATAGGTATCTCTG-CCTACCCA-------GGGATAAATATTCTAA---------TTTCTTTTTCTGTCTTCTCATCA i micMur3.chr14 I 3 C 0 s proCoq1.NW_012145301v1 3862736 64 + 3993831 GA---GAATATGTATCTCTG-CCTATCCA-------GAGATAAATATTCTAA---------TTTCTTTTTCTGTCTTCCCATCA i proCoq1.NW_012145301v1 I 17 C 0 s otoGar3.GL873580 11155039 64 - 11315646 GA---GAATATGTATGTTTG-CCTACCCC-------GGGATAAATATTCTAA---------TTTATTTTTCCGTTTTCTTGTTG i otoGar3.GL873580 I 3 C 0 s mm10.chr8 86475032 69 - 129401213 CA---GACTTTATCTTTCAGTCATGCCCACATTTATAGCATAAATATTCCCA------------CATTTTCTGTTTAGCTGACT i mm10.chr8 C 0 C 0 s canFam3.chr16 16844434 69 - 59632846 GA---TAAAATATATCTCTG-CATATCCA-------GGGATCAGTATTCTCA----CTTTTCTTTTTTTTATGTTTTCCTGTCA i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1335588 75 - 2520184 GAGCTGAATATATTCCTCTA--TGGTCCA-------GGGATGAATATTTGCATAATTTGCTCTCTGTTTCTTGTTCCTTAAACA i dasNov3.JH570353 C 0 C 0 a score=139159.000000 s hg38.chr4_KI270789v1_alt 1351 17 + 205944 -GTGGTAG----AATGCTG----------------------------------TGA s panTro5.chr4 192789323 17 + 194502333 -GTGGTAG----AATGCTG----------------------------------TGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678117 17 + 195804263 -CTGGTAG----AATGCTG----------------------------------TGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715386 17 + 4876863 -GTGGTAG----AATGCTG----------------------------------TGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601379 17 + 115148730 -GTGATAC----AGTGCTG----------------------------------TGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883876 17 + 190429646 -GTGGTAG----AAGGCTG----------------------------------TGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831325 17 + 189454096 -GTGGTAG----AAGGCTG----------------------------------TGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212486 17 - 25927173 -GTGGTAG----AAGGCTG----------------------------------TGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246889 17 + 4669795 -GTGGTAG----AAGGCTG----------------------------------TGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204204 17 + 135778131 -GTGGTAG----AAGGCTG----------------------------------TGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634674 17 - 2847728 -GTGGTAG----AAGGCTG----------------------------------TGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766747 17 + 2368649 -GTGGTAG----AAGGCTG----------------------------------TGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032509 17 - 14256875 -ATGACAG----AATGCTG----------------------------------CGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921530 17 - 2196201 -ACGACAG----AATGCTG----------------------------------TGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3314847 17 - 5030052 -ATGGTAG----AATGCGG----------------------------------TGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449330 17 - 93316391 -GGGATAA----AATGCTG----------------------------------TGC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862800 17 + 3993831 -GGGATAG----AATGCTG----------------------------------TGC i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86475101 51 - 129401213 -GAGAGGG----AAAATTGTGTGCAAGTTTTGGGTAAGGACTGCAACAGGAATTGC i mm10.chr8 C 0 C 0 s canFam3.chr16 16844503 17 - 59632846 -ATAATAG----AGTGCCG----------------------------------TGg i canFam3.chr16 C 0 I 113 s dasNov3.JH570353 1335663 22 - 2520184 GAGAGTAGAGTAAAAGTTG----------------------------------TTT i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11155103 0 - 11315646 C a score=68224.000000 s hg38.chr4_KI270789v1_alt 1368 8 + 205944 TATTTCCC--- s panTro5.chr4 192789340 8 + 194502333 TATTTCCC--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678134 8 + 195804263 TATTTCCC--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715403 8 + 4876863 TATTTCCC--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601396 8 + 115148730 TATTTCCC--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883893 8 + 190429646 TATTTCTC--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831342 8 + 189454096 TATTTCTC--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212503 8 - 25927173 TATTTCTC--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246906 8 + 4669795 TATTTCTC--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204221 6 + 135778131 TATTTC----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634691 8 - 2847728 TATTTCTT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766764 8 + 2368649 TATTTCCC--- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032526 8 - 14256875 CATTTCCC--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921547 8 - 2196201 CATTTCCC--- i cebCap1.NW_016107886v1 C 0 I 60 s aotNan1.NW_018492112v1 3314864 7 - 5030052 CATTTCC---- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449347 8 - 93316391 TGTTTCCT--- i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862817 8 + 3993831 TGTTTTCT--- i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86475152 8 - 129401213 TGTTCCCT--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16844633 8 - 59632846 tattcctc--- i canFam3.chr16 I 113 C 0 s dasNov3.JH570353 1335685 10 - 2520184 -ttttcttttg i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11155103 0 - 11315646 C a score=10438.000000 s hg38.chr4_KI270789v1_alt 1376 1 + 205944 T s panTro5.chr4 192789348 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678142 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715411 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601404 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883901 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831350 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212511 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246914 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2634699 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766772 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032534 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3314871 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449355 1 - 93316391 T i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862825 1 + 3993831 T i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86475160 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr16 16844641 1 - 59632846 t i canFam3.chr16 C 0 I 105 s dasNov3.JH570353 1335695 1 - 2520184 t i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e chlSab2.chr7 134204227 0 + 135778131 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=1476234.000000 s hg38.chr4_KI270789v1_alt 1377 152 + 205944 TCTCTTTCTCTTTTGGCCACACCAGACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTACAGGGAAGATGGAAAAAGACATGTGTT--G--TTTGAGTTTGTTTCAACATTGATGAGGTGTGTTGGGCAGTATGAAGAGGGAGAAGAG s panTro5.chr4 192789349 152 + 194502333 TCTCTTTCTCTTTTGGCCACACCAGACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTACAGGGAAGATGGCAAAAGACATGTGTT--G--TTTGAGTTTGTTTCAACATTGATGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678143 152 + 195804263 TCTCTTTCTCTTTTGGCCACACCAGACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTACAGGGAAGATGGCAAAAGACATGTGTT--G--TCTGAGTTTGTTTCAACATTGATGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715412 152 + 4876863 TCTCTTTCTCTTTTGGCCACACCAGACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTACAGGGAAGATGGAAAAAGACATGTGTT--G--TTTGAGTTTGTTTCAACATTGATGAGGTGTGTTGGGCAGTATGAAGAGGGAGAAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601405 148 + 115148730 TCTCTTCCTCTTTTGGCCACATCAGACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGACAAAGACACGTGTT--G--TTTGAGTTTG----AACGTCAATGAGGTGTGTTAGGCAGCACGAAGAGGGAGAAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188883902 151 + 190429646 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGGAAAAGACACGTGTT--G--TTTGA-TTTGTTTGAACATCGATGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831351 151 + 189454096 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGGAAAAGACACGTGTT--G--TTTGA-TTTGTTTGAACATCGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212512 151 - 25927173 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGGAAAAGACACGTGTT--G--TTTGA-TTTGTTTGAACATCGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3246915 151 + 4669795 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGGAAAAGACACGTGTT--G--TTTGA-TTTGTTTGAACATCGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204227 151 + 135778131 CCTTTTCTTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAACATGGAGCATAGTAGTTAGAGGGAAGATGGAAAAGGACACGTGTT--G--TTTGA-TTTGTTTGAACATTGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634700 151 - 2847728 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGGAAAAGACACGTGTT--G--TTTGA-TTTGTTTGAACATCGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766773 151 + 2368649 TCTCTTCCTCTTTTGGCCACACCACACAGGAGAAGGGAATTTAAGGAAATGTGGAGCATAGTAGTTAGAGGGAAGATGGAAAAAGACATGTGTT--G--TTTGC-TTTGTTTGAACATTGACGAGGTGTGTTAGGCAGTATGAAGAGGGAGAAGAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032535 135 - 14256875 CCACGTCCTCTCTTGGCCACGCCAGAC----------------ACGAAACGTGGAGCATAGTACTTAGAGGGAAGATGGAAAAAGACACGTGTT--G--TTTGAGTGTGTTTG-ACACTGATGAGGTGTGTTACACAGTATGACGAGGGAGAAGAG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3314872 135 - 5030052 CCACTTCCTCTCTTGGCCACGCCAGAC----------------ACGAAACGTGGAGCACAGTAGTTAGAGGGAAGATGGAAAAAGACACGTGTT--G--TTTGAGTGTGTTTG-ACGCTGATGAGGTGTGTTACGCAGTATGGCGAGGGAGAAGAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449356 139 - 93316391 TCACTTCCTTT---------------TGGGAGAAATGAATTTAAGGAAATGTACAGCATAGTGGTTGGAGGGAAGATAGAAAAGGATCTACGTTGAG--GTTAAGTTGGTTTGAACATTGATGAGATGTGTTGGGCAGTATGTAGAGGAGGAAGAG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3862826 154 + 3993831 CCACTTCCTCTTTTGACCACACCAGATGGGAGAAGGGAATTTAAGGAAATGTATAGCCTAGTGGTTGGAGAGAAGATAGAAAAGCATCTACGTTGAG--TTTAAGTTGGTTTGAACATTGATGGGATGTGTTAGGCAGTATGTagaggaagaagag i proCoq1.NW_012145301v1 C 0 I 423 s mm10.chr8 86475161 125 - 129401213 CTACTTCCTCTCCCCACTACACCAAA----------------AGGGAAAAACACAGAAAAATGTTTAAGGAAAAGAAGGCAA--GATACGTGTT--G--ATT--------TTGACCATTGATGAGCTATATTA-GTGATGAGCAGAAGGAGAAGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16844747 147 - 59632846 CTTCCTTTTCTTCTGTCTATCCCAAAAAGGAGAAGGGAATTTAAGGAAATGTTTAAC--AGTGGTGAGAGGAAAAGTTG-AAAAGATTTATGTG--G-AGTTGAGTTTGCTTGAACACTGATGAAATGTT---GGATTTATGAAGTGGGAGAGGGG i canFam3.chr16 I 105 C 0 s dasNov3.JH570353 1335696 143 - 2520184 tttgttttgttttTTACTAGACCAGGCAGAAGAATGGAATTCGGGAAAATGCACAGCAAAGTGAACAGAGAGAAGATGGAAAAAGAAGTATGTT--GCATGTGAATTTCTTTGAACATTGATGAGATA-----------ATGTAGAGGGAGAAGAG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=25585.000000 s hg38.chr4_KI270789v1_alt 1529 2 + 205944 AG s panTro5.chr4 192789501 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678295 2 + 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715564 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601553 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884053 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831502 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212663 2 - 25927173 AG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247066 2 + 4669795 AG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204378 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634851 2 - 2847728 AG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766924 2 + 2368649 AG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032670 2 - 14256875 AG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315007 2 - 5030052 AG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449495 2 - 93316391 AG i micMur3.chr14 C 0 I 415 s mm10.chr8 86475286 2 - 129401213 TG i mm10.chr8 C 0 I 3 s canFam3.chr16 16844894 2 - 59632846 AG i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1335839 2 - 2520184 AG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=592580.000000 s hg38.chr4_KI270789v1_alt 1531 70 + 205944 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CAAATAGGACAGAGGACAGGGAGAAAAAGAAGACATGCGTGA s panTro5.chr4 192789503 70 + 194502333 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CCAGTAGGACAGAGGACAGGGAGAAAAAGAAGACATGCATGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678297 70 + 195804263 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CCAGTAGGACAGAGGACAGGGAGAAAAAGAAGACATGCATGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715566 70 + 4876863 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CCAATACGACAGAGGACAGGGAGAAAAAGAAGACATGCGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601555 70 + 115148730 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGCATGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884055 71 + 190429646 -TGAGAGCAAGAAGGAACTGTAGGGAACACCCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831504 71 + 189454096 -TGAGAGCAAGAAGGAACTGTAGGGAACACCCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212665 71 - 25927173 -TGAGAGCAAGAAGGAACTGTAGGGAACACCCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247068 71 + 4669795 -TGAGAGCAAGAAGGAACTGTAGGGAACACCCAATAGGACAGAGGACAGGGAGAAAGAGAAGACGTGATTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204380 70 + 135778131 -TGAGAGCAAGAAGGAACTGTAGGGAACA-CCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634853 71 - 2847728 -TGAGAGCAAGAAGGAACTGTAGGGAACACCCAACAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766926 70 + 2368649 -TGAGAGCTAGAAGGAACTGTAGGAAACA-CCAATAGGACAGAGGACAGGGAGAAAGAGAAGACATGATTGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032672 69 - 14256875 -TGACAGCAAGAAGGAACTGTAGGG-ACA-TCAGTGGGGCAGAGGACAGGGAGGAAGAGAAGGCATGCCTGA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315009 69 - 5030052 -TGACAGCGAGAAGGAACTGCAAGG-ACA-CCAGGAGGGCAGAGGACAGGGAGAAAGAGAAGACATGCGTGA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475291 57 - 129401213 -AGATCTCAAGCAAGAACATTAGGAAATG-TTGACAGAAGGTGTGAGGTGGTGAGA-------------TTA i mm10.chr8 I 3 C 0 s canFam3.chr16 16844899 70 - 59632846 -AGACAGTAAGAAGGAACTCTTGAGGATG-CCAATAGTGCAGAGGACATAGAGAAAGAGAAGACTCAAATGA i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1335841 70 - 2520184 AAGAGAGT-AGAAGGAGCTCTAGGAAACA-CCAAAAGGGAAGAGGAGGTAGAGAATGAAGAGACATGTGTGA i dasNov3.JH570353 C 0 I 384 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=111237.000000 s hg38.chr4_KI270789v1_alt 1601 13 + 205944 GATTAAAAGAAAC s panTro5.chr4 192789573 13 + 194502333 GATTAAAAGAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678367 13 + 195804263 GATTAAAAGAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715636 13 + 4876863 GATTAAAAGAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601625 13 + 115148730 GACTAAAAGAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884126 13 + 190429646 GATTAAAAGAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831575 13 + 189454096 GATTAAAAGAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212736 13 - 25927173 GATTAAAAGAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247139 13 + 4669795 GATTAAAAGAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204450 13 + 135778131 GATTAAAAGAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634924 13 - 2847728 GATTAAAAGAAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 766996 13 + 2368649 GATGAAAAGAAAC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13032741 13 - 14256875 GATTAAACAAAAC i saiBol1.JH378165 C 0 I 133 s aotNan1.NW_018492112v1 3315078 13 - 5030052 GATTAAACGAAAC i aotNan1.NW_018492112v1 C 0 I 132 s mm10.chr8 86475348 13 - 129401213 GATTGACAGGAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16844969 13 - 59632846 GATTGTAAGGATA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=14456.000000 s hg38.chr4_KI270789v1_alt 1614 2 + 205944 Tg s panTro5.chr4 192789586 2 + 194502333 Tg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678380 2 + 195804263 Tg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715649 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601638 2 + 115148730 Tg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884139 2 + 190429646 TG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831588 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212749 2 - 25927173 TG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247152 2 + 4669795 TG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204463 2 + 135778131 Tg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2634937 2 - 2847728 TG i manLeu1.NW_012102221v1 C 0 M 2060 s colAng1.NW_012116221v1 767009 2 + 2368649 Tg i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86475361 2 - 129401213 TC i mm10.chr8 C 0 C 0 s canFam3.chr16 16844982 2 - 59632846 TG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=169833.000000 s hg38.chr4_KI270789v1_alt 1616 47 + 205944 gccgggcaccg---------tggctcatgcctgtaaccccagcactttgggaggct s panTro5.chr4 192789588 47 + 194502333 gccgggcactg---------tggctcatgcctgtaatcccagcactttgggaggct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678382 47 + 195804263 gccgggcactg---------tggctcatgcctgtaatcccagcactttgggaggct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715651 47 + 4876863 Cccgggcaccg---------tggctcatgcctgtaatcccagcactttgggaggtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601640 47 + 115148730 gccgggcgcgg---------tggctcacgcctgtaatcccagcactttgggaagcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884141 40 + 190429646 ACGAGACATGG---------TGG-------ctgtaatcccagcactttggcaggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831590 40 + 189454096 ACGAGACATGG---------TGG-------ctgtaatcccagcactttggcaggcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212751 47 - 25927173 ACGAgacatgg---------tggctcgtgcctgtaatcccagcactttggcaggcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247154 47 + 4669795 ACGAgacatgg---------tggctcgtgcctgtaatcccagcactttgggaggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204465 47 + 135778131 accagacacag---------tggctcgtgcccgtaatcccagcactttgacaggcc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767011 47 + 2368649 accagacacgg---------tggctcgtgcccgtaatcccagcactttgggaggcc i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86475363 56 - 129401213 AAATGGCAATGTTAATCCACTGGCAATAGTTTGTCAATTCAGAGCTCTCGGGAGTT i mm10.chr8 C 0 I 91 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e canFam3.chr16 16844984 0 - 59632846 C e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155103 0 - 11315646 C a score=267022.000000 s hg38.chr4_KI270789v1_alt 1663 60 + 205944 gaggtgggcggat------------------------catgaggtcaggagattgagaccatcctggctaacatggtgaaaccc s panTro5.chr4 192789635 60 + 194502333 gaggtgggcagat------------------------catgaggtcaggagattgagaccatcctggctaacatggtgaaaccc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678429 60 + 195804263 gaggtgggcagat------------------------catgaggtcaggagattgagaccatcctggctaacatggtgaaaccc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715698 60 + 4876863 gaggtgggcggat------------------------catgaggtcaggagattgagaccatcctggctaacatggtgaaaccc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601687 84 + 115148730 gaggtgggtggatcatgaagtcaggagatcgagaccacatgaagtcaggagatcgagaccatcctggctaataccgtgaaaccc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884181 60 + 190429646 gaggcaggcagat------------------------catgaggtcaggagatcgagaccatcctggctaacatggtgaaacct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831630 60 + 189454096 gaggcaggcagat------------------------catgaggtcaggagatcgagaccatcctggctaacatggtgaaacct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212798 60 - 25927173 gaggcaggcagat------------------------catgaggtcaggagatcgagaccatcctggctaacatggtgaaacct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247201 60 + 4669795 gaggcaggcagat------------------------catgaggtcaggagatcgagaccatcctggctaacatggtgaaacct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204512 60 + 135778131 gaggcaggcggat------------------------catgaggtcaggagatcgagaccatcctggctaacacggtgaaacct i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767058 60 + 2368649 gaggcaggcggat------------------------catgaggtcaggagatcgagaccatcctggctcacacggtgaaacct i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16844984 19 - 59632846 -----------------------------------------------------------------GGCTAAAATGGTAATAACC i canFam3.chr16 C 0 I 117 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e mm10.chr8 86475419 91 - 129401213 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155103 0 - 11315646 C a score=666054.000000 s hg38.chr4_KI270789v1_alt 1723 167 + 205944 cgtctctactaaaaatag-aaaaaattagcagagcatggtgg-------cgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacccaggaggcggagcttgcagtgagcggagattgtgccactgcactccagcctgggcaacagagcgagact-c s panTro5.chr4 192789695 167 + 194502333 cgtttctactaaaaatag-aaaaaattagccgagcatggtgg-------caggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacacaggaggcggagcttgcagtgagcggagattgtgccactgcactccagcctgggcgacagagcgagact-c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678489 167 + 195804263 cgtttctactaaaaatag-aaaaaattagccgagcatggtgg-------caggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcctgaacacaggaggcggagcttgcagtgagcggagattgtgccactgcactccagcctgggcgacagagcgagact-c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715758 167 + 4876863 cgtctctactaaaaatag-aaaaaattagctgagcgtggtgg-------cgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatgtcctgaacccaggaggtggagcttgcagtgagcggagattgtgccactgcactccagcctgggcaacagagcgagact-c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601771 168 + 115148730 cacctctactaagaatagaaaaaaattagccagacatggtgg-------caggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggccgagcttgcagacagcagagatcacaccactgcactccagcctgggtgacagagcgagact-c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884241 166 + 190429646 cgtctgtactaaaaatac-aaaaaattagctgggcgaggtgt-------cgggcgtctgtagtcccagctactcaggagaccgaggcaggagattctcgtgaatctggaaggcagaggttgcagtgagctgagatcgtaccgttacactccagcctgggcaacagagcaagatt-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831690 166 + 189454096 cgtctgtactaaaaatac-aaaaaattagctgggcgaggtgt-------cgggcgtctgtagtcccagctactcaggagaccgaggcaggagattctcgtgaacctggaaggcagaggttgcagtgagctgagatcgtaccgttacactccagcctgggcaacagagcaagatt-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24212858 166 - 25927173 cgtctgtactaaaaatac-aaaaaattagctgggcgaggtgt-------cgggtgtctgtagtcccagctactcaggagaccgaggcaggagattctcgtgaacctggaaggcagaggttgcagtgagctgagatcgtaccgttacactccagcctgggcaacagagcaagatt-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247261 167 + 4669795 catctgtactaaaaatac-aaaaaattagctgggtgaggtgt-------ctggcgtctgtagtcccagctactcaggagaccgaggcaggagattctcgtgaacctggaaggcagaggttgcagtgagctgagatcgtactgttacactccagcctgggcaacagagcaagactc- i cerAty1.NW_012001672v1 C 0 I 199 s chlSab2.chr7 134204572 173 + 135778131 catctgtactaaaaatac-aaaaagttagttgggtgaggtgtcggccgccgggcgccggtagtcccagctactcaggagactgaggcaggagattctcgtgaacctggaaggcagaggttgcaatgagctgagatggtgccattacactccagcctgggcaacagagcgagacc-- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767118 166 + 2368649 cgtctgtactaaaaatac-aaaaaattagctgggcgaggtgt-------cgggcgcctgtagtcccagctactcaggagactgaggcaggagattctcgtgaacctggaaggcagaggttgcagtgagctgagattgtgccattacactccagcctgggcaacagagcgagacc-- i colAng1.NW_012116221v1 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e canFam3.chr16 16845003 117 - 59632846 I e mm10.chr8 86475419 91 - 129401213 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155103 0 - 11315646 C a score=18955.000000 s hg38.chr4_KI270789v1_alt 1890 14 + 205944 cgtctcaaaaaaaa s panTro5.chr4 192789862 8 + 194502333 cgtctc------aa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678656 5 + 195804263 cgtct--------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715925 6 + 4876863 cgtctc-------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601939 14 + 115148730 cgcctcaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884407 14 + 190429646 catctcataaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831856 14 + 189454096 catctcataaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213024 14 - 25927173 catctcataaaaaa i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134204745 14 + 135778131 catctcattaaaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767284 14 + 2368649 catctcataaaaaa i colAng1.NW_012116221v1 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e canFam3.chr16 16845003 117 - 59632846 I e mm10.chr8 86475419 91 - 129401213 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=40607.000000 s hg38.chr4_KI270789v1_alt 1904 18 + 205944 aaaaaaaaaaaaaaaaaa s panTro5.chr4 192789870 18 + 194502333 aaaaaaaaaaaaaaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678661 12 + 195804263 ------acaaaaaaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715931 16 + 4876863 --aaaaaaaaaaaaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188884421 18 + 190429646 aaaaaaaaaaagaaagaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187831870 18 + 189454096 aaaaaaaaaaaaaaagaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213038 18 - 25927173 aaaaaaaaaagaaagaaa i macNem1.NW_012013133v1 C 0 I 184 s chlSab2.chr7 134204759 18 + 135778131 aaaaagaaaaagaaaaga i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767298 18 + 2368649 aaaaaagaaaaaaagaaa i colAng1.NW_012116221v1 C 0 I 188 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e canFam3.chr16 16845003 117 - 59632846 I e mm10.chr8 86475419 91 - 129401213 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=1911.000000 s hg38.chr4_KI270789v1_alt 1922 1 + 205944 a s panTro5.chr4 192789888 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678673 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715947 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188884439 1 + 190429646 a i rheMac8.chr5 C 0 I 184 s macFas5.chr5 187831888 1 + 189454096 a i macFas5.chr5 C 0 I 1 s chlSab2.chr7 134204777 1 + 135778131 a i chlSab2.chr7 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e dasNov3.JH570353 1335911 384 - 2520184 I e canFam3.chr16 16845003 117 - 59632846 I e mm10.chr8 86475419 91 - 129401213 I e aotNan1.NW_018492112v1 3315091 132 - 5030052 I e saiBol1.JH378165 13032754 133 - 14256875 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=4800.000000 s hg38.chr4_KI270789v1_alt 1923 2 + 205944 aT s panTro5.chr4 192789889 2 + 194502333 at i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678674 2 + 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715948 2 + 4876863 at i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187831890 1 + 189454096 A- i macFas5.chr5 I 1 C 0 s chlSab2.chr7 134204778 2 + 135778131 aT i chlSab2.chr7 C 0 I 177 s saiBol1.JH378165 13032887 2 - 14256875 AT i saiBol1.JH378165 I 133 C 0 s aotNan1.NW_018492112v1 3315223 2 - 5030052 AT i aotNan1.NW_018492112v1 I 132 C 0 s mm10.chr8 86475510 2 - 129401213 AT i mm10.chr8 I 91 C 0 s canFam3.chr16 16845120 2 - 59632846 AT i canFam3.chr16 I 117 C 0 s dasNov3.JH570353 1336295 2 - 2520184 AT i dasNov3.JH570353 I 384 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=16614.000000 s hg38.chr4_KI270789v1_alt 1925 8 + 205944 AGAAAAGT s panTro5.chr4 192789891 8 + 194502333 agaaaaGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678676 8 + 195804263 agaaaaGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715950 7 + 4876863 agaaaa-T i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187831891 8 + 189454096 AAAACAGT i macFas5.chr5 C 0 I 162 s saiBol1.JH378165 13032889 8 - 14256875 AGAAAAGT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315225 8 - 5030052 AGATAAGT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475512 8 - 129401213 GAAAGAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16845122 8 - 59632846 AGAAAAGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336297 8 - 2520184 AGACGAGC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=121052.000000 s hg38.chr4_KI270789v1_alt 1933 107 + 205944 CCCTATAGGCAAGGTTA----GCATAAGGCAAAATTGTGAAGTACTTAGTGTGTATCGTCCGGAAC-AGGTCTTTTTTGCTCTGCAAT--CCTT--------CACATGCTACAGAAACATTG s panTro5.chr4 192789899 107 + 194502333 CCCTATAGGCAAGGTTA----GCATAAGGCAAAATTGCGAAGTACTCAGTGTGTATCGTCCGGAAC-AGGTCTTTTTTGCTCTGCAAT--CCTT--------CACATAATACAGAAACATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678684 107 + 195804263 CCCTATAGGCAAGGTTA----GCATAAGGCAAAATTGCGAAGTACTCAGTGTGTATCGTCCGGAAC-AGGTCTTTTTTGCTCTGCAAT--CCTT--------CACATAATACAGAAACATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3715957 107 + 4876863 CCCTATAGGCAAGGTTA----GCATAAGGCAAAATTGTGAAGTACTTAGTGTGTATCGTCCGGAAC-AGGTCTTTTCTGCTCTGCAAT--CCTT--------CACATGCTACAGAAACATTG i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13032897 110 - 14256875 CCCTATAGGCAAGGTAAGCAGGCATAAGGCAAAATTGTGAGGTGCTCAGTGTGTATCACAGACAGC-AGGTCTTTCCT-TTCTGCAAT--CCTT--------TACTTACTGTGGAAGTAGCG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315233 104 - 5030052 CCCTATAG--AAGGTAA----GCATAAGGCAAAATTGTGAAGTACTCGGTGTGTACCATAGAGAGC-AGGTCTTTCCT-TTCTGCAGT--CCTT--------TACTTACTATGGACGTAGCG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475520 93 - 129401213 ATATGTAGGCAAGGTTA------ATAA---------------TCTTCCATGTGTGTC----TGAGA-TGACTCTTCCT-TTCCCCATT--TCTTGTAAATCCTATGTACTAAAATAATACTC i mm10.chr8 C 0 I 14 s canFam3.chr16 16845130 105 - 59632846 CTCTGTTGATAAGATCT----GTATAAAACAAAATTGTGAAGTATTCAGTGGGTGTTTTAGGGAAC-TGGTTCTGTTT--TAGGAAATTATTTT--------TATGTACTGAAGCCATCT-- i canFam3.chr16 C 0 I 9 s dasNov3.JH570353 1336305 95 - 2520184 CTCTACAAACAGGGCAA--AAGTATAA------------AAATATTTGGTGTGTATCTTAGGAACCTAGGCTGCTTCCGTTTTGC-----TTTT--------TACATATTTCAAAATCATCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921555 60 - 2196201 I e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=49840.000000 s hg38.chr4_KI270789v1_alt 2040 43 + 205944 --------CAGTCTCTTTTAT------------CAGGATCTAGTCT----------ATGATTTGTTATGATCT s panTro5.chr4 192790006 43 + 194502333 --------CAGTCTCTTTTAT------------CAGGATCTAGTCT----------ATGATTTGTTATGATCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678791 43 + 195804263 --------CAGTCTCTTTTAT------------CAGGATCTAGTCT----------ATGATTTGTTATGATCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716064 43 + 4876863 --------CAGTCTCTTTTAT------------CAGGATCTAGTCT----------ATGATTTGTTATGATCT i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033007 39 - 14256875 --------CAGTCTCTT--AC------------CAGGATCTATTC------------TGATTTCTTATGATGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921615 41 - 2196201 --------CAGTCTCTTTCAT------------CGGGATCTATTC------------TGATTTCTTACGATGT i cebCap1.NW_016107886v1 I 60 C 0 s aotNan1.NW_018492112v1 3315337 41 - 5030052 --------CAGTCTCTTCTAT------------CAGGATCTATTC------------TGATTTCTCATGATGT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475627 65 - 129401213 --------CCCTCTCTACTATTTTCCTCTTTTGCAAAATCTAGAATAAATCAATAAATAATATCTTTCAACCA i mm10.chr8 I 14 C 0 s canFam3.chr16 16845244 61 - 59632846 --------CAGGCTCCCTCACCCCTCTCTTCCATAGAATCTATTGT----AAATAAGTGGTCTCTGCTGGTCA i canFam3.chr16 I 9 C 0 s dasNov3.JH570353 1336400 57 - 2520184 TAATTCCTTCTTCCTCTCTAT------------CAAATTCTATTCT----AAAGAAATGATCTGCTGCAGCCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3862980 423 + 3993831 I e micMur3.chr14 17449497 415 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=377286.000000 s hg38.chr4_KI270789v1_alt 2083 139 + 205944 GTCACTTTGAGATAAACATGATTGGTAAGTGTTAAAGTGTTACTCTCCCCTGTTTTTCATTTCTTTTATTTTGTTTTGCCATTTTTTTAGG----GGGAGGCAGATGAATACATTTTGTGTTAAAATTTCATGCATTGATACT s panTro5.chr4 192790049 139 + 194502333 GTCACTTTGAGATAAACATGATTGGTAAGTGTTAAAGTGTTACTCTCCCCTGTTTTTCATTTCTTTTATTTTGTTTTGCCATTTTTTTAGG----GGGAGGCAGATGAATACATTTTGTGTTAAAATTTCATGCATTGATACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678834 139 + 195804263 GTCACTTTGAGATAAACATGATTGGTAAGTGTTAAAGTGTTACTCTCCCCTGTTTTTCATTTCTTTTATTTTGTTTTGCCATTTTTTTAGG----GGGAGGCAGATGAATACATTTTGTGTTAAAATTTCATGCATTGATACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716107 138 + 4876863 GTCACTTTGAGATAAATATGATTGGTAAGTGTTAAAGTGTTACTCT-CCCTGTTTTTCATTTCTTTTATTTTGTTTTGCCATTTTTTTAGG----GGGAAGCAGATGAATACATTTTGGGTTAAAATTTCTTGCATTGATACT i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033046 139 - 14256875 GTCACTTTGAGATCAACATGACTGGCAAGTGTTAAACTGTCACTGTCCACTGTTGTTTGTTTGTTTTATTTTGTTTTGCCATTCTTTTAGG----GGGAGACAGATGAATACATTTTGCGTGAAAATTTCACGCATTGATACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921656 120 - 2196201 GTCACTTTGAGATAAACATGACTGGCAAGGGTTAAACTGTCACTCTCCCCCGTT---------TTTTGTTTTGTTTTGCCGTT-TTTTAGG----GGGAGAGAGATGAATACATTTTGTGTGAAA---------ATTGATCCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3315378 134 - 5030052 GTCACTTTGAGATAAACATGACGGGCAAGTGTTAAACCGTCACTCTCCCCTGCT----ttttgttttattttgttttgctgtt-ttttAGG----GGAAGACAGATGAATACATTTCGTATGAAAATTCCATGCATTAATACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17449912 137 - 93316391 GTCACTTTGAGATGAACGTGATTGGTAAGGGTTAAAGTATTACCTTCCCATGGTTTCTGTTTTGTTT-CTTTGTTTTGCCTTT-TCTTAGG----GGGAGACAGATGAATACATTTTGTGTTAAAATTTCATGCATTGATACT i micMur3.chr14 I 415 C 0 s proCoq1.NW_012145301v1 3863403 137 + 3993831 GTCACTTTGAGATGAACATGACTGGTAAGGGTTAAAGTGTTACCTTCCCTTGGTTTCTGTTTTGTTT-CTTTGTTTTGCCTTT-TCTTAGG----GGGAGACAGATGAATCCATTTTGTGTTAAAATTTCATGCATTGGTACT i proCoq1.NW_012145301v1 I 423 I 466 s mm10.chr8 86475692 123 - 129401213 TTTTCTCTGAGATAAATATG---TACCAATGTAGATGTATAACT---CCATTCTTGTTGCTTTATTTGCTTT------CTATGTCTTAAAA----AGTAGACATATGAACATAT----GAATAAAATTTCACATCTTGATATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16845305 103 - 59632846 CTTACTTTGAAATAAACATTATTGGTAGA----------------------------------------TTTACTTTTTTATTGTCTGGGAAGATAGGAGACAGATGAATACATGTCACGTTAGAATTCCATGTATCAATACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336457 91 - 2520184 TTCACTTTGAAATATATGTGATTGGTGAATTTTAATGTGTTAC----------------------------------------------AG----TGGAGACAG--GAGTGTAACTCATGCTAGAATTCTAAGCATCAATACT i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=321921.000000 s hg38.chr4_KI270789v1_alt 2222 120 + 205944 ATCGGGGAAG----TATAGA-----CTTCTAAGAGAATATCTGA----TTGAGACA---------------------------------------GAAAATTATGTAATAGTTCAGAACATGAATTTTGAATTtgcctttgggtaagctgatttccctgaggctgttttttt- s panTro5.chr4 192790188 120 + 194502333 ATCGGTGAAG----CATGGA-----CTTCTAAGAGAATATCTGA----TTGAGACA---------------------------------------GAAAATTATGTAATAGTTCAGAACATGAATTTTGAATTTGCCTTTGGGTAAGCTGATTTCCCTGAGGCTGTTTTTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192678973 120 + 195804263 ATCGGTGAAG----CATGGA-----CTTCTAAGAGAATATCTGA----TTGAGACA---------------------------------------GAAAATTATGTAATAGTTCAGAACATGAATTTTGAATTtgcctttgggtaagctgatttccctgaggctgttttttt- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716245 118 + 4876863 ATCGGTGAAG----CATAGA-----CT--TAAGAGAATATCTGA----TTGAGACA---------------------------------------GAAAATTATGTAATAGTTCAGAACATGAATTTTGAATTTGCCTTTGGGTAAGCTGATTTCCCTGAGGCTGTTTTTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033185 120 - 14256875 GTTGGTGAAG----CGTAGA-----CTTCTAAGAGAATATCTGA----TTGAGATG---------------------------------------GAAAATTATGTAATAGTTCAGAACACGATTTTTGAATTTACCTTTGAGTAAGCTGATTGCCCTGAGGCTAGTTTTTT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921776 120 - 2196201 GTTGGTGAAG----CGTAGA-----CTTCTAAGAGAATATCTGA----TTGAGATG---------------------------------------GAAAATTATGTAATAGTTCAGAACACGATTTTTGAATTTGCCTTTGAGTAAGCTGATTGCCCTGAGGCTGGTTTTTT- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3315512 120 - 5030052 GTTGGTGAAG----CGTAGA-----CTTCTAAGAGAATATCTGA----TTGAGACG---------------------------------------GAAAATTATGTAATAGTTCAGAACACGATTTTTGAATTtgcctttgagtaagccgattgccctgaggctggtttttt- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17450049 109 - 93316391 CTTGGTTGAG-------------------TAAGAGAATATCCGA----TTGAGAAA---------------------------------------GAAAGTCGTATGGTAGTGCAG-ACATGAATTTTGAATTtgcctttgggcaatttaatttccctgaggcttttttttt- i micMur3.chr14 C 0 I 343 s mm10.chr8 86475815 125 - 129401213 -TTGTTGAAAATGTCATTGC-----CTT-CACGAGGACATCTGAATACCTGCTATA----------------------------------------AGCACGGTGTTGTGCTTGAGAGTGGGAGTTTTGGTTTTGCCTTTGGGTAACTTAACTTCTCCGATGCTCTTCTTTC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16845408 160 - 59632846 ATCAGTAAAG----TAAATATATATCTTGTAAGAGAAAATTTGA----TTAAGAGGtaaaatagtaaaaaacaaaaataaaaaataaataaGAGGTAAAATTGTGTTGTAG----GAGCATCAATTTTGAATTTGCATTTAAGCAACTTGATTTCCCTGAGGTTGTTTTTGG- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336548 125 - 2520184 TCTGGGAAAG----CAGGTCCGTATTTTCTATGTGGATATCTGA----CTGGGAGG---------------------------------------AAGAATTCT-TAGTACTTAAGACCATGAATTTTGAAtatgcctttgggtgacttaatttccctgaggctccattttat i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=91091.000000 s hg38.chr4_KI270789v1_alt 2342 36 + 205944 aacgtggaaaat-------------cagagtaataataattgctatctc s panTro5.chr4 192790308 36 + 194502333 AACGTGGAAAAT-------------CAGAGTAATAATAATTGCTATCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679093 36 + 195804263 aacgtggaaaat-------------cagagtaataataattgcTATCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716363 36 + 4876863 AACGTGGAAAAT-------------CAGAGTAATAATAATTGCTATCTC i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033305 36 - 14256875 AATGTGGAAAAT-------------GAGAGTAATAATAATTTCTATCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921896 36 - 2196201 AATGTGGAAAAT-------------GAGAGTCACAATAATTGCCATCTC i cebCap1.NW_016107886v1 C 0 I 10 s aotNan1.NW_018492112v1 3315632 36 - 5030052 aatatggaaaat-------------gagagtaataataattgctatctc i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475940 47 - 129401213 --CATGAAAAATCTATTAGGACATACTGAGCGATAACAATTATCACTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16845568 36 - 59632846 GGGATGGAGAAT-------------GGAAGTAATAATAATTGCTATCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336673 29 - 2520184 aatgtagaaaat-------------gggagtaatagtaATTG------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=2154.000000 s hg38.chr4_KI270789v1_alt 2378 5 + 205944 gtaAA s panTro5.chr4 192790344 5 + 194502333 GTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679129 4 + 195804263 GTAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716399 5 + 4876863 GTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033341 5 - 14256875 ACAGA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315668 5 - 5030052 acaga i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86475987 5 - 129401213 GTAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16845604 5 - 59632846 ACTGA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336702 0 - 2520184 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=2364.000000 s hg38.chr4_KI270789v1_alt 2383 2 + 205944 TA s panTro5.chr4 192790349 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679133 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716404 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033346 2 - 14256875 TG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315673 2 - 5030052 ta i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16845609 2 - 59632846 TA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336702 0 - 2520184 C e mm10.chr8 86475992 0 - 129401213 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=1332.000000 s hg38.chr4_KI270789v1_alt 2385 2 + 205944 TA s panTro5.chr4 192790351 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679134 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716406 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s aotNan1.NW_018492112v1 3315675 2 - 5030052 tg i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336702 0 - 2520184 C e canFam3.chr16 16845611 0 - 59632846 C e mm10.chr8 86475992 0 - 129401213 C e saiBol1.JH378165 13033348 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=12698.000000 s hg38.chr4_KI270789v1_alt 2387 24 + 205944 TTTTTTAAATTTCTTTTtaatttt s panTro5.chr4 192790353 24 + 194502333 TTTTTTAAATTTCTTTTtaatttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679136 24 + 195804263 TTTTTTAAATTTCTTTTtaatttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716408 24 + 4876863 TTTTTTAAATTTCTTTTtaatttt i gorGor5.CYUI01015356v1 C 0 C 0 s dasNov3.JH570353 1336702 5 - 2520184 -------------------ATTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e canFam3.chr16 16845611 0 - 59632846 C e mm10.chr8 86475992 0 - 129401213 C e aotNan1.NW_018492112v1 3315677 0 - 5030052 C e saiBol1.JH378165 13033348 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=47840.000000 s hg38.chr4_KI270789v1_alt 2411 91 + 205944 tgtccttttttaagtagagacgggttttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccgcctcggcctcc s panTro5.chr4 192790377 91 + 194502333 tgtctttttttaagtagagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccgcctcggcctcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679160 90 + 195804263 tgtc-ttttttaagtagtgacggggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgcccgcctcggcctcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716432 91 + 4876863 tgtctttttttaagtagagatggggttccaccatgttggccaggctggtctcaaactcctgacctcaagtgatctgccctcctcggcctcc i gorGor5.CYUI01015356v1 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336707 0 - 2520184 C e canFam3.chr16 16845611 0 - 59632846 C e mm10.chr8 86475992 0 - 129401213 C e aotNan1.NW_018492112v1 3315677 0 - 5030052 C e saiBol1.JH378165 13033348 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=20125.000000 s hg38.chr4_KI270789v1_alt 2502 41 + 205944 caaagtgctgggattacaggcgtgagccaccatgcccagcc s panTro5.chr4 192790468 41 + 194502333 cagagtgctgggattacaggcgtgagccaccatgcccggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679250 41 + 195804263 caaagtgctgggattacaggcgtgagccaccatgcccggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716523 41 + 4876863 caaagtgctgggattacaggcgtgagccaccatgcccggcc i gorGor5.CYUI01015356v1 C 0 C 0 s mm10.chr8 86475992 14 - 129401213 CAAACTGACAGAAT--------------------------- i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336707 0 - 2520184 C e canFam3.chr16 16845611 0 - 59632846 C e aotNan1.NW_018492112v1 3315677 0 - 5030052 C e saiBol1.JH378165 13033348 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=1365.000000 s hg38.chr4_KI270789v1_alt 2543 1 + 205944 T s panTro5.chr4 192790509 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679291 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716564 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033348 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16845611 1 - 59632846 T i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1336707 0 - 2520184 C e mm10.chr8 86476006 0 - 129401213 C e aotNan1.NW_018492112v1 3315677 0 - 5030052 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=1179.000000 s hg38.chr4_KI270789v1_alt 2544 1 + 205944 A s panTro5.chr4 192790510 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679292 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716565 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033349 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16845612 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336707 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e mm10.chr8 86476006 0 - 129401213 C e aotNan1.NW_018492112v1 3315677 0 - 5030052 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=3276.000000 s hg38.chr4_KI270789v1_alt 2545 1 + 205944 T s panTro5.chr4 192790511 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679293 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716566 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033350 1 - 14256875 t i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3315677 1 - 5030052 t i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86476006 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr16 16845613 1 - 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336708 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 921932 10 - 2196201 I e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=514169.000000 s hg38.chr4_KI270789v1_alt 2546 221 + 205944 TTTTAAAATTTCA-TAAA---ATTTTTTACACTAGAAATTGTTCACTATGTTGTACTATTGTCGTTATTATTTTTCAACT-CATTTTGGCTATGAGCACTAAACTCTAACCTGAATA-TCATAGT---TTCCTAGTTTCTGAGGCAATTTGGACTAAGGCAGTTTCAGAACTAACACAAGAGAATCTGGAATTGTCTTTATAAGACTGATGTC-C-CTGTGTCTGAAGGGAG s panTro5.chr4 192790512 221 + 194502333 TTTTAAAATTTCA-TAAA---ATTTTTTACACTAGAAATTGTTCACTATATTGTACTATTGTCATTATTATTTTTCAACT-CATTTTGGCTATGAGCACTAAACTCTAACCTGAATA-TCATAGT---TTCCTAGTTTCTGAGGCAATTTGGACTAAGGCAGTTTCAGAACTAACACAAGAGAATCTGGAATTGTCTTTATAAGACTGATGTC-C-CTGTGTCTGAAGGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679294 221 + 195804263 TTTTAAAATTTCA-TAAA---ATTTTTTACACTAGAAATTGTTCACTATATTGTACTATTGTCATTATTATTTTTCAACT-CATTTTGGCTATGAGCACTAAACTCTAACCTGAATA-TCATAGT---TTCCTAGTTTCTGAGGCAATTTGGACTAAGGCAGTTTCAGAACTAACACAAGAGAATCTGGAATTGTCTTTATAAGACTGATGTC-C-CTGTGTCTGAAGGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716567 221 + 4876863 TTTTAAAATTTCA-TAAA---ATTTTTTACACTAGAAATTGTTCACTATATTGTACTATTGTCATTATTATTTGTCAACT-CATTTTGGCTATGAGCACTAAACTCTAACCTGAATA-TCATAGT---TTCCTAGTTTCTGAGGCAATTTGGACTAAGGCAGTTTCAGAACTAACACAAGAGAATCTGGAATTGTCTTTGTAAGACTGATGTC-C-CAGTGTCTGAAGGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13033351 216 - 14256875 ttttaaaatttta-taaa---attttttaCACTAGAAATTGTTCAATATATTATATTTTTGTCATTATTATTTTCCAACT-TATTTTGGCTGTGAGCGCTAAACTCTAACCTGAACATTCCTAGT---TTCTTAGTTTCTGAGCCAATTTGGATT----CAGTTTCAGAACTCACACGAG--AATCTGGAACTGTCTTTGCAAGATTGATCTC-C-CTGGGTCTGAGGGGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 921942 217 - 2196201 TTTTAAAATTTTA-TAAA---GTTTTTTACACTAGAAATTGTTTAATATATTGTATTATTGTCATTATTATTTTCCAACT-TATTTTGGCTGTGAGCACTAAACTCTCACCTGAGTAGTCCTAGT---TTCTTAGCTTTTGAGCCAATTTGGATT----CAGTTTCAGAACTCACACTAGACAATGTGGCACTGTCTTTGCAAGATTGATCT--C-CTGGGTCTGAGGGGAG i cebCap1.NW_016107886v1 I 10 C 0 s aotNan1.NW_018492112v1 3315678 218 - 5030052 ttttaaaatttta-taaa---atTTTTTACACTAGAAATTGTTCAATATGTTGTATTATTGTCATTATTATTTTCCAACT-TATTTTGGCTGTGAGCACTAAACTCTAACCTGAATATTCCTAGT---TTCTTAGTTTCTGAACCAATTTGGATT----CAGCTTCAGAACTAACACTAGAGAATCTGGAACTGTCTTTGCAAGATTGATCTC-C-CTGGGTCTGAAGGGAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86476007 209 - 129401213 TTATAAA-----A-TAAG---ATCCTCCACCCTAGAAAAATTCCAACATCGTGTATTACCATCACTTTTATTTTTCAGATACATTTTGGCTGTGAGCACCAAATTACAGCTTGAATA-TTCCATTTCGTTTTTTTTTTCCTACAGAGTTGAGGATAAGGCCGTTTCAGAATTAATAGTACAGAA------------CTTTCAAGATTAACCACAC-TTAAGTTTGAAAGCAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16845614 216 - 59632846 TTTAAGAATTTCA-TAAAAGCATCTTTAACAGAAGAAATTGTTAAATttat--tattatttttgttattattattCAGCT-CATTTTGGCTAAGGGCACTAACGTATAAATTGAATATTCATGGA---TCCTCAGTTTCTGATCTAATTTGGACT----AAGTTTCAGACTTACAGGTATAGGATGTGGATTTGTT----CAGGGCAGATTTC-CATTATGTCGGAAGGGAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336709 219 - 2520184 TTTAAGAATTTCACTAAA---GTTTCCCACATTGGAAGCTATTCACTATATTGTATTATAATCACCATTATTTTCCAGTT-CA-CTTGGCTGTAAGCAGTAAACTATAATCTGGATATTCACAGT---TCACTCCTTTTGGAGCCAATTTGGACTAAGGCAGTTTCAGATCTAATGGTGCAAAATCTGGAATTG---TTACAAGATTGGTATC-CATTATGCCCGAAGGGA- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=154166.000000 s hg38.chr4_KI270789v1_alt 2767 67 + 205944 GCCACGGAAGCCCAGCCATTCCCTGACATGCGCTCCAGTTTCACTCT-TAGAGAGTAAGTAGGAGTGG s panTro5.chr4 192790733 67 + 194502333 GCCACGGAAGCCCAGCCATTCCCTGACATGCGCTCCAGTTTCACTCT-TAGAGAATAAGTAGGAGTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679515 67 + 195804263 GCCACGGAAGCCCAGCCATTCCCTGACATGCGCTCCAGTTTCACTCT-TAGAGAATAAGTAGGAGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716788 67 + 4876863 GCCACGGAAGCCCAGCCATTCCCTGACATGCGCTCCAGTTTCACTCT-TAGAGAGTAAATAGGAGTGG i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189543251 66 - 190850796 GCCACGGAAACCCAGCCATTTCCTGACGT-CACTACAGTGTCACTCC-TAGAGAGTAAGCCCGAGTGC i calJac3.chr3 N 0 C 0 s saiBol1.JH378165 13033567 66 - 14256875 GCCACGGAAACCCCGCCATTCCCTGACAT-CACTCCAGGGTCACTGC-TAGAGAGTAAGCAGGAGTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922159 66 - 2196201 GCCGCGGAAACCTAGCCATTCCCTGACAT-CACTCCAGGGTCACTCC-TAGAGAGCAAGCAGGAGTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3315896 66 - 5030052 GCCACGGAAACCCAGCCATTCCCTGACAT-CACTCCAGTGTTACTCC-TAGAGAGTAAGCAGGAGTGC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86476216 68 - 129401213 TTCATAGAATTATAATATTTTCTTGATGTGGAGTTTGATTTCATTTTATAGAGAGTAGGTAAGTGTGG i mm10.chr8 C 0 I 1155 s canFam3.chr16 16845830 57 - 59632846 CCCACTGAAATACAGCAATCAC----TATGTGCACCTGGTT---TTT-CAGAGCATAGATGGGGC--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336928 63 - 2520184 TCCCCTGAAATTCAGCCAGCCCCT---AT-TGCCCGAGCTTTCTTTT-TAGAGAACAGGTAGAGGTGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=240948.000000 s hg38.chr4_KI270789v1_alt 2834 110 + 205944 GCGGGCTTTGTCCCC--------AGTCCTGCCACCCAGCC-TCCTTTTCCCTGGGGTTTCCTAT---GGAAGGAGCTGCGTGTGTAAAGA-GCAACACTCAGCGACACATCAAAC-CCAGTGTC s panTro5.chr4 192790800 110 + 194502333 GCGGGCTTTGTCCCC--------AGTCCTGCCACCCAGCC-TCCTTTTCCCTGGGGTTTCCTAT---GGAAGGAGCTGCGTGTGTAAAGA-GCAACACTCAGCGACACATCAAAC-CCAGTGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679582 110 + 195804263 GCGGGCTTTGTCCCC--------AGTCCTGCCACCCAGCC-TCCTTTTCCCTGGGGTTTCCTAT---GGAAGGAGCTGCGTGTGTAAAGA-GCAACACTCAGCGACACATCAAAC-CCAGTGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716855 110 + 4876863 GCGGGCTTTGTCCCC--------AGTCCTGCCACCCAGCC-TCCTTTTCCCTGGGGTTTCCTAT---GGAAGGAGCTGCGTGTGTAAAGA-GCAACACTCAGCGACACATCAAAC-CCAGTGTC i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189543317 110 - 190850796 GAGGGCTTTGTCCCT--------AATCCTGCCGCCCAGCTTTCCTTTCCTCTGAGGCTTCCTCC---AGAAGGAGCTGCAGGTATACAGA-GCAACACTCAGCGAGGGACGAAGC-CCA-TGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033633 108 - 14256875 GAGGGCTTTGTCCCC--------AATCCTGCTGCCCAGCTTTCCTTTCCTCTGAGGTTTCCTCT---GGAAGGAGCTGCAGGTATACAGA-GTAACACTCAGCGAGGCATCAAGC-CCA-TG-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922225 108 - 2196201 GAGGGCTTTGACCCT--------AATCCTACCTCCCAGCCTTCCCTTCCTCTGAGGTTTCCTCC---GGAAGGAGCTGCACATATACAGA-GTAACACTCAGCGAGGAATCAAGC-CCC-TG-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3315962 108 - 5030052 GAGGGCTTTGTCCCT--------AATCCTGCTGCCCAGCTTTCCTTTCCTCTGAGGTTTCCTCC---AGAAGGAGCTGCATGTATACAGA-GTAACACTCAGCAAGGCATTGAGC-CCA-TG-- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16845887 124 - 59632846 AAGGGTTGCATCCCTGAAGCCTGAATCCTGCTACTCATTTTTCCTTTCCTCTGAGGTCTCTTACAAAGAAGGGAATTGTACATGCAAAAATGTAATACTCAATGAGATACCAAGTACCAATTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1336991 99 - 2520184 --GCAGTTTTCCCCC--------AGGCCTACCACTTACCC-----TTCCTCTGAAATGTCCCA----GCAGGGAGTTATACATACAAAGA-GGAATAAGCAGTGAAA----AGAC-CAAGTATC i dasNov3.JH570353 C 0 I 584 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e mm10.chr8 86476284 1155 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=149363.000000 s hg38.chr4_KI270789v1_alt 2944 61 + 205944 TCTCTGGCTGGACCCGTCCTCAGCAGAGC--CCCTAGAGCGCTTCTGGTTCCAGCTGCATTTG s panTro5.chr4 192790910 61 + 194502333 TCTCTGGCTGGACCCGTCCTCAGCAGAGC--CCCTGGAGTGCTTCTGGTTCCAGCTGCATTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679692 61 + 195804263 TCTCTGGCTGGACCCGTCCTCAGCAGAGC--CCCTGGAGTGCTTCTGGTTCCAGCTGCATTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3716965 61 + 4876863 TCTCTGGCTGGACTCGTCCTCAGCAGAGC--CCCTGGAGCGCTTCTGGTTCCAGCTGCATTTG i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189543427 61 - 190850796 TCTCCGGCTGGACCAGTACTCAGGAGAGC--CTCTGAGGCACTTCTGGTTCCAGCCGCATTCG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033741 61 - 14256875 TCTCCGGCTGGACCAGTGCTCGGGAGAGC--CCCTGGGGCACTTCTGGTTCCAGCTGCATTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922333 61 - 2196201 TCTCCGGCTGGACCAGTGCTCAGGAGAGC--CCCTGGGGCATTTCTGGTTCCAGCTGCATTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316070 61 - 5030052 CATCTGGCTGGACCAGTGCTCAGAAGAGC--CCCTGGGGCACTTCTGGTTCCAGCTGCATTTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16846011 63 - 59632846 TTTCTTGCTGAACAAATATTCAGTAGACCCTCCCGGAGGCTTTCTTTCTTAAAGCTTCATTTG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=5085.000000 s hg38.chr4_KI270789v1_alt 3005 5 + 205944 AAAAC s panTro5.chr4 192790971 5 + 194502333 AAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679753 5 + 195804263 AAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717026 5 + 4876863 AAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s aotNan1.NW_018492112v1 3316131 5 - 5030052 AAAAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16846074 5 - 59632846 AGAGC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189543488 0 - 190850796 C e cebCap1.NW_016107886v1 922394 0 - 2196201 C e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e saiBol1.JH378165 13033802 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=90.000000 s hg38.chr4_KI270789v1_alt 3010 1 + 205944 T s panTro5.chr4 192790976 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679758 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717031 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s aotNan1.NW_018492112v1 3316136 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189543488 0 - 190850796 C e cebCap1.NW_016107886v1 922394 0 - 2196201 C e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846079 0 - 59632846 C e mm10.chr8 86476284 1155 - 129401213 I e saiBol1.JH378165 13033802 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=168394.000000 s hg38.chr4_KI270789v1_alt 3011 313 + 205944 GGCTTTTggccgggcgcggtggctcacgcctgtcatcccagcactctgggaggccgaggcgggtggatcacgaggtttggagttcgagaccagcctggctaatatggtgaaaccccgtctctactaaagatacaaaaaattagccgggcgtggtgtccggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtagtgagccgagatcgagccactgcactccagcctggcaacagagcgagactctgtctcaaaaaa-aaaaaataaataa--------------aaataaa s panTro5.chr4 192790977 326 + 194502333 GGCTTTTggccgggcgcggtggctcacgcctgtcatcccagcactctgggaggccaaggcgggtgtatcacgaagtttggagttcgagaccagcctggctaatatggtgaaaccccgtctctactaaagatacaaaaaattagccgggtgtggtgtccggtgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtagtgagccgagatcgagccactgcactccagcctggcaacagagcaagactctgtctcaaaaaataaaaaataaataaataa--aaataaataaataaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192679759 327 + 195804263 GGCTTTTggccgggcgcggtggctcacgcctgtcatcccagcactctgggaggccaaggcgggtgtatcacgaagtttggagttcgagaccagcctggctaatatggtgaaaccccgtctctactaaagatacaaaaaattagccgggcgtggtgtccggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgtagtgagccgagatcgagccactgcactccagcctggcaacagagcgagactctgtctcaaaata-aataaataaataaataaataaataaataaataaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717032 327 + 4876863 GGCTTTTggccgggagcggtggctcacgcctgtcatcccagcactctgggaggccgaggcgggtggatcacaaggtttggagttcgagaccagcctggctaatacggtgaaaccccgtctctactaaagatacaaaacattagccgggtctggtgtccggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggtggaggttgtagtgagccgagatcgagccactgcactccagcctggcaacagagcgagactctgtctcaaaaaa-aaaataaaataaaataaataaataaataaataaa i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189543488 0 - 190850796 C e cebCap1.NW_016107886v1 922394 0 - 2196201 C e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846079 0 - 59632846 C e mm10.chr8 86476284 1155 - 129401213 I e aotNan1.NW_018492112v1 3316137 0 - 5030052 C e saiBol1.JH378165 13033802 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e nomLeu3.chr7b 112601953 0 + 115148730 C e otoGar3.GL873580 11155103 0 - 11315646 C a score=5196.000000 s hg38.chr4_KI270789v1_alt 3324 8 + 205944 taaataat s panTro5.chr4 192791303 8 + 194502333 taaataat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680086 8 + 195804263 taaataat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717359 7 + 4876863 t-aaTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601953 8 + 115148730 taaataat i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189543488 0 - 190850796 C e cebCap1.NW_016107886v1 922394 0 - 2196201 C e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846079 0 - 59632846 C e mm10.chr8 86476284 1155 - 129401213 I e aotNan1.NW_018492112v1 3316137 0 - 5030052 C e saiBol1.JH378165 13033802 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=10192.000000 s hg38.chr4_KI270789v1_alt 3332 4 + 205944 aaaA s panTro5.chr4 192791311 4 + 194502333 aaaA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680094 4 + 195804263 aaaA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717366 4 + 4876863 AAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601961 4 + 115148730 aaaa i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543488 4 - 190850796 AAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033802 4 - 14256875 AAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922394 4 - 2196201 AAAA i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846079 0 - 59632846 C e mm10.chr8 86476284 1155 - 129401213 I e aotNan1.NW_018492112v1 3316137 0 - 5030052 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=4852.000000 s hg38.chr4_KI270789v1_alt 3336 2 + 205944 CT s panTro5.chr4 192791315 2 + 194502333 CT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680098 2 + 195804263 CT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717370 2 + 4876863 CT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601965 2 + 115148730 CT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543492 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033806 2 - 14256875 CT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922398 2 - 2196201 CT i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16846079 2 - 59632846 CC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e aotNan1.NW_018492112v1 3316137 0 - 5030052 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=235649.000000 s hg38.chr4_KI270789v1_alt 3338 85 + 205944 GGCTTTTTCCAGGAGGCCTGCGTGAGGACTCTTGCTTCCTCTTCACTCTCTTACATCTAAGATGCTGGACTGAGGAGGAGGC-TGC- s panTro5.chr4 192791317 85 + 194502333 GGCTTTTTCCAGGAGGCCTGCGTGAGGACTCTTGCTTCCTCTTCACTCCCTTACATCTAAGATGCTGGACTGAGGAGGAGGC-TGC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680100 85 + 195804263 GGCTTTTTCCAGGAGGCCTGCGTGAGGACTCTTGCTTCCTCTTCACTCCCTTACATCTAAGATGCTGGACTGAGGAGGAGGC-TGC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717372 85 + 4876863 GGCTTTTTCCAGGAGGCCTGCGTAAGGACTCTTGCTTCCTCTTCACTCCCTTACATCTAAGATGCTGGACTGAGGAGGAGGC-TGC- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112601967 85 + 115148730 GGCTTTTTCCAGGAGGTCTGTGTAACGACTCTTGCTTCCTCTTCACTCTCTTACATCTAAGATATTGGACTGAGGAGGAGGC-TGT- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543494 85 - 190850796 GGCTTTTCCCAGGAGGCCTGCGTG-GGACTCTTGCTTCCTCTTCACTCCCTTCCATCTAAGATGCTGGAATGAGCAGGAGGCCTGT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033808 84 - 14256875 GGCTTTTCCTGGGAGGCCTGCGTGAGGACGCTTGCTTCCCCGTCAC-ACCTTACATCTAAGATGCTGGAGCGAGCAGGA-GCTTGT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922400 86 - 2196201 GGCTTTTCCCAGGAGGCCTGCATGAGGACACTTGCTTCCCCTTCACTCCCTGACATCTAAGATGCTGGAATCAGCAGGAGGCTTGT- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316137 86 - 5030052 GGCTTTTCCCAGGAGGCCTGCGTGAGGGCTCTTGCTTCCTCTTCACTCCCTTACATCTAAGATGCTGGAATGAGCAGGAGGCTTGT- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16846081 68 - 59632846 GACTTTGGCCAGGAGGCC----CAAAG---------TCATCTTCTCTCTCCT-----TAAAATGCTGGGCTGAAAAGGTTGA-TTCC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3863540 466 + 3993831 I e micMur3.chr14 17450158 343 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=298712.000000 s hg38.chr4_KI270789v1_alt 3423 67 + 205944 GGCCTGATTTGCCCTCCCAGCCTTAG--CTGAGAAGCTGG-AAAGAGTGGAGGGAGATGAGGATTTCC-------------AG s panTro5.chr4 192791402 67 + 194502333 GGCCTGATTTGCCCTCCCAGCCTTAG--CTGAGAAGCTGG-AAAGAGTGGAGGCAGACGAGGATTTCC-------------AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680185 67 + 195804263 GGCCTGATTTGCCCTCCCAGCCTTAG--CTGAGAAGCTGG-AAAGAGTGGAGGGAGACGAGGATTTCC-------------AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717457 67 + 4876863 AGCCTGATTTGCCCTCCCAGCCTTAG--CTGAGAAGCTGG-AAAGAGTGGAGGGAGACGAGGATTTCC-------------AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602052 67 + 115148730 GGCCTGATTTGCCCTCCCAGCCTCAG--CTGAGAAGCTGG-AAAGAGTGGAGGGTGACGAGGATTTCC-------------AG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543579 75 - 190850796 GGCCTGATTTGCCCTCCCAGCCTTAG--CCAAGAACCT------GAGTGGAGGGAGACGAGGATTTCCAGGCTGTCCTTGAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033892 80 - 14256875 GGCCTGATTTACCCTCCCAGCCTTAG--CCAAGAACCTGG-AAAGAGTGGAGGGAGGTGAGGATTTCCAGGCTGTCTTTGAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922486 80 - 2196201 GGCCTGATTTGCCCTCCCAGCCTTAG--CCAAGAACCTGG-AAAGAGTGGAGGGACATGAGGATTTCCAGGCTGTCTTTGAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316223 80 - 5030052 GGCCTGATTTGCCCTCCCAGCCTTAG--CCAAGAACCTGG-AAAGAGTGGAGGGAGATGAGGATTTCCAGGCTGTCTTTGAAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17450501 68 - 93316391 GGCCCGATTTGCGCTCCCAGCCTCAG--CAGGGAAGCTGGAAAAGAGTGGAGGACGATGAGGATTTCC-------------AG i micMur3.chr14 I 343 I 357 s proCoq1.NW_012145301v1 3864006 68 + 3993831 GGCCTGATTTGCCCTCCCAGACTCAG--CAGAGAAGCTGGAAAAGAGTGGAGGACAATGAGGATTTCC-------------AG i proCoq1.NW_012145301v1 I 466 I 728 s canFam3.chr16 16846149 70 - 59632846 AGCCTAACCTGCCATCCCAGCCTTAGGTCAGAGAAGCTGGAATAAAATAGAGGAGGTACAGTATTTCC-------------AG i canFam3.chr16 C 0 I 42 e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=167293.000000 s hg38.chr4_KI270789v1_alt 3490 58 + 205944 CA---CAGCCTCCACTTGGCAGTCCACCTTT-AGAGGCCAG-GCCAGGCTACAGCAGGGAGTC s panTro5.chr4 192791469 58 + 194502333 CA---CAGCCTCCACTTGGCAGTTCACCTTT-AGAGGCCAG-GCCAGGCTACAGCAGGGAGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680252 58 + 195804263 CA---CAGCCTCCACTTGGCAGTCCACCTTT-AGAGGCCAG-GCCAGGCTACAGCAGGGAGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717524 58 + 4876863 CA---CAGCCTCCACTTGGCAGTTCACCTTT-AGAGGCCAG-GCCAGGCTACAGCAGGGAGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602119 58 + 115148730 TA---CAGCCTCCACTTGGCAGTTCACCTTT-AGAGGCCAG-GCCAGGCTACAGCAGGGAGTC i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543654 53 - 190850796 CA---CGGCCTCTACTTGGCAATTA------GAGGGGCCAG-GCCAGGCTACAGCAGGGAGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13033972 59 - 14256875 CA---CGGCCTTTACTGGGCAATTCACCTTTGAGGGGCCAG-GCCTGGCTACAGCTGCGAGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922566 62 - 2196201 CATGGCAGCCTCTGTTTGGCAATTCACCTTTGAGGGGCCAG-GCCAGGCTACAGCAGGGAGTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316303 59 - 5030052 CA---CAGCCTCTACTTGGCAATTCACCTTTGAGGGGCCAG-GCCAGGCTACAGCAGGGAGTC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16846261 57 - 59632846 ---AGCAGCCCCTACTTGACAGTCTACCCTAGAGAAGCCAGAGCCA---TAGAGTAATAGGTC i canFam3.chr16 I 42 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450569 357 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86476284 1155 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=250303.000000 s hg38.chr4_KI270789v1_alt 3548 80 + 205944 TGAGGACCAACGGGACTCAGGGC------------------AGGGCCTGGGTTCCCCGGTAAGACCAGGTTGGGCCATGTACTGGCAAATGTGGTCCA s panTro5.chr4 192791527 80 + 194502333 TGAGGACCAGCGGGACTCAGGGC------------------AGGGCCTGGGTTCGCCTGTCAGACCAGGTTGGGCCATGTACTGGCAAATGTGGTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680310 80 + 195804263 TGAGGACCAGCGGGACTCAGGGC------------------AGGGCCTGGGTTCGCCTGTCAGACCAGGTTGGGCCATGTACTGGCAAATGTGGTCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717582 80 + 4876863 TGAGGACCAGTGGGACTCAGGGC------------------AGGGCCTGGGTTCGCCTGTAAGACCAGGTTGGGCCATGTACTGGCAAATGTGGTCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602177 80 + 115148730 TGAGGACCAGCGGGACTCAGGGC------------------AGGGCCTGGGTTCACCTGTAAGACCAGGTTGGGCCATGTACTGGCAAATGTGGTCCA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543707 79 - 190850796 TGAGGACCAGTGGGACTC-GGGC------------------AAGGCCTGGGCTCACTTCTAAGACCAGGTGGTGCCATGTACTGGAAAATGTGGTCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034031 80 - 14256875 TGAAGACCAGTGGGACTCAGGGC------------------AGGGCCTGGGTTCACCTGTAAGACCAGGTGGTGCCATGTACTGGCAAATGTGGTCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922628 80 - 2196201 TGAGGACCAGTGGGGCTCAGGGC------------------AGGGCCTGGGTTCCCCTGTAAGACCCGGCGGAGCCATGTCCTGGCAACTGTGGTCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316362 80 - 5030052 TGAGGACCAGTGGGACTCAGGGC------------------AGGGCCTGGGTTCACCTGTAAGACCAGGTGGTACCATGTACTGGCAAATGTGGTCCA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86477439 74 - 129401213 TGTGGAGAGGCGGGAATGAGGA------------------------CTGGGTTTGCATTTAAGACTGACTTAAACTACTTATGGGCAAAAATCTTTCA i mm10.chr8 I 1155 C 0 s canFam3.chr16 16846318 95 - 59632846 TGATAAACACAGAGACCCATGAAACAGGAAGAAAGCAAGTGAGGCCTTAGGCTT--CTCTAACCCCCAGTTGTGTCAACTA-TGGCAAAAGTGGTCTA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450569 357 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155103 0 - 11315646 C a score=428459.000000 s hg38.chr4_KI270789v1_alt 3628 134 + 205944 ACGACTGACCTAATGGAAA-------AATAATTTCTGTAGGCAAAAGGTCTGGCCAGGGTATAAGGA-------------------GGGACA-AAAGGAAGCGGTAGGAACATG--GGGA----------GGAAGTT-CTCTCCTTATAAAAATTGTATAAGATTTGAACTGTT s panTro5.chr4 192791607 134 + 194502333 ATGACTGACCTAATGGAAA-------GATAATTTCTGTAGGCAAAAGGTCTGGCCAGGGTATAAGGA-------------------GGGACA-AAAGGAAGCGGCAGGAACATG--GGGA----------GGAAGTT-CTCTCCTTATAAAAATTGTATAAGATTTGAACTGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680390 134 + 195804263 ATGACTGACCTAATGGAAA-------AATAATTTCTGTAGGCAAAAGGTCTGGCCAGGGTATAAGGA-------------------GGGACA-AAAGGAAGTGGCAGGAACATG--GGGA----------GGAAGTT-CTCTCCTTATAAAAATTGTATAAGATTTGAACTGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717662 134 + 4876863 ATGACTGACCTAACGGAAA-------AATAATTTCTGTAGGTAAAAGGTCTGGCCAGGGTATAAGGA-------------------GGGACA-AAAGGAAGTGGCAGGAACATG--GGGA----------GGAAGTT-CTCTCCTTATAAAAATTGTATAAGATTTGAACTGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602257 122 + 115148730 ATGACTGACGTAATAGAAA-------AATAATTTCTGTAGGCAAAAGGTCTGGCCAGGGTGTAAGGA-------------------TGGACA-AAAGGAAGTGGCAGGAAC------------------------TT-CTCTCCTTATAAAAATGGTATAAGATTTGAACTGTT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543786 123 - 190850796 ATGACTG----------AA-------AATAACTTCTGTGGGCAAAAGGTATGGCCAGGGTGGAAGGA-------------------GGGACG-AA-GGAAGCGGCAGGAATATG--GGGA----------GGAAGTT-CTCTCCTAATGAAACTGGTACCAGGTTTGAAATGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034111 134 - 14256875 GTGACTGACCTTACAGAAA-------AATAATTTCTGTGGGCAAAAGGTATGGCCAGGGTGTAAGGA-------------------GGGACA-AAGGGAAGCGGCGGGAATATG--GGGA----------GGAAGTT-CTCTCCTTGTGAAAGTGGTGCAAGATTTGAAATGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922708 134 - 2196201 GTGACTGACCTTATGGAAA-------AATAATTTCTGTGGGCAAAAGGTATGGCCAGGGTGTAAGGA-------------------GGGACG-AAAGGAAGCGGCAGGAATACA--GGGA----------GGAAGTT-CTCTCCTTATAAAAATGGTACAAGATTTGAAATGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316442 134 - 5030052 ATGACTGACCTTATGGAAA-------AATAATTTCTGTGAGCAAAAGGTATGGCCAGGGTGTAAGGA-------------------GGGACA-AAAGGAAGCGGCAGGAATATG--GGGA----------GGAAGTT-CTCTGCTTACAAAAATCATACAAGATTTGAAATGTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11155103 135 - 11315646 ATGACTGGACATAATTGAA-------AATTCTTTCTATGGGCAAAAGATGTGGCCGGGGTAGAAGGA-------------------AGTACA-GAAGTAGGTGGCAGGAACCTG--GGTC----------AGAACTTGCCTTCCTTAAAAAAGCAGCGTAAAATTTGAAATATT i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86477513 144 - 129401213 ATGAACCAGATAATTGAAA----ATGAGCTATTTTTATAGACAAAAAA-ATGGAGTAATTTTAAGGA-------------------AAGACAGAAAGAAAACTTTAGGAACATG--GGTAGAATAATGTGGGAGATG-CATTCTTTATAAAAA---CATGAGAATTAAGTTATT i mm10.chr8 C 0 I 548 s canFam3.chr16 16846413 151 - 59632846 GTGAGTGACCAAATTGAAAATAAATAAATTCTTTCTATGGACAGAAGA---AGACTAGATCTATGGATCTATGAATCCATGGATTGGATATA-AAGAAAAATGTCAGAAATATGGTGGCA----------AAAGTTT-CTTCCCTTATATAAACAGTAGAATATTT-------- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450569 357 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I a score=158151.000000 s hg38.chr4_KI270789v1_alt 3762 55 + 205944 CTATCTCAACATGTTTTTGAATGTGTATCATTGAAAAACAATGGAGTCGGGTGTG s panTro5.chr4 192791741 55 + 194502333 CTATCTCAACATGTTTTTGAATGTGTATCATTGAAAAACAATGGAGTCGGGTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680524 55 + 195804263 CTATCTCAACATGTTTTTGAATGTGTATCATTGAAAAACAATGGAGTCGGGCGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717796 55 + 4876863 CTATCTCAACATGTTTTTGAATGTGTATCATTGAAAAACTATGGAGTTGGGCGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602379 55 + 115148730 CTGTCTCAACATGTTTTTGAATGTGTATCATTCAAAAACAGTGGAGTCAGGCATT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543909 54 - 190850796 CCACCTCAAAATGTTTT-GAATGTGTATCGTTCAAAGACGATGGAGTCAGGCACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034245 55 - 14256875 CTATCTTAAAATGTTTTCGAATGTGTATCATTCAAAAACAATGGAGTCAGACATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922842 55 - 2196201 CTATCTCAAAATGTTTTTGAAAGTGTATCATTCAAAAACAATGGAGTCAGGCATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316576 55 - 5030052 CTATCTCAAAATGTTTTCAAATGTGTATCATTCAAAAACAATGGAGTCAGGAATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11155242 49 - 11315646 CTATCTCACAATCT------GAGTGGATCGTTCAAAAATAACGGAGTCTAGGATC i otoGar3.GL873580 I 4 I 1 s canFam3.chr16 16846564 49 - 59632846 CCATCTGGAAATCT------GAGCGAATCATTCTAAAGGGACCAGCTCAATGTTC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450569 357 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I a score=136655.000000 s hg38.chr4_KI270789v1_alt 3817 27 + 205944 GATGCTAAAATTATTTTAGATAGTTCT s panTro5.chr4 192791796 27 + 194502333 GATGCTAAAATTATTTTAGATAGTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680579 27 + 195804263 GATGCTAAAATTATTTTAGATAGTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717851 27 + 4876863 GATGCTAAAATTATCTTAGATAGTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602434 25 + 115148730 GATGCTAAAATTATTT--GATAGTTCT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543963 27 - 190850796 GATGCTAAAATGATTTTAGATAGTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034300 27 - 14256875 GATGCTAAAATTATTTTAGATAGTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922897 27 - 2196201 GATGCTAAGATTATTTTAGATAGTTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316631 27 - 5030052 GATGCTAAAATCATTTTAGATAGTTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17450926 27 - 93316391 GATGCTAAAATCATTTTAGATAGTTCT i micMur3.chr14 I 357 I 101 s otoGar3.GL873580 11155292 27 - 11315646 GATGTTAAAATTGTATTAGATGGTTCT i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16846613 27 - 59632846 TGTGCTACAATTATTTCAGGTAGTTCT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I a score=237314.000000 s hg38.chr4_KI270789v1_alt 3844 77 + 205944 TTCACTGTGG-C-CCCCATTGCCCCGAGAAAATGTTCCCTGAGTCCC--ATCAATTCTAAAAAGCACTAAACATTTTGTTT- s panTro5.chr4 192791823 77 + 194502333 TTCACTGTGG-C-CCCCACTGCCCCGAGAAAATGTTCCCTGAGTCCC--ATCAATTCTAAAAAGCACTAAACATTTTGTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680606 77 + 195804263 TTCACTGTGG-C-CCCCACTGCCCCGAGAAAATGTTCCCTGAGTCCC--ATCAATTCTAAAAAGCACTAAACATTTTGTTT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717878 77 + 4876863 TTCACTGTGG-C-CCCCCACTGCGCGAGAAAATGTTCCCTGAGTCCC--ATCAATTCTAAAAAGCACTAAACATTTTGTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602459 78 + 115148730 TTCCCTGTGGTC-CCCCATTGCCCAGAGAAAATGTTCCCTGAGTCCC--ATCATTTCTAAAAAACACTTAACATTTTGTTT- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189543990 77 - 190850796 TTCACTGTGG-CACCCCATT-CCCAGAGAAAATGCTCCCCGAGTCCT--ATCAATTCTAAAAAGCAGTATACTGTTTGTTT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034327 78 - 14256875 TTCATTGTGG-CACGCCATTACCCAGAGAAAATATTCCCTGAGTCCT--GTTAATTCTAAAAAGCAGTAAACGGTTTGTTT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 922924 78 - 2196201 TTCACTGTGG-CACCCCGTTACCCAGAGAAAATGTGCCCTGAGTCCT--GTTAATTCTAAAAAGCAGTAAACAGTATGTTT- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316658 78 - 5030052 TTCACTGTGG-CACCCCACTACCCAGAGAAAATGTTCCCTGAGTCCT--GTTAATTCTAAAAAGCAGTAAACAGTTTGTTT- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11155319 80 - 11315646 GTCATTCTGG-CCCCCTCCTGCTCAGAGAAAATTTTCCCTGAGTCCTCACTCACTTTCTAAAAGCATTAAACAGttttttt- i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16846640 79 - 59632846 TCCACTCTGG-CCCCTCATTGTCCAGACGAAAATGTCCCTGAGTCCC--TCCTAATCCAAATATATACATAGAGTTTCTTTA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I a score=27549.000000 s hg38.chr4_KI270789v1_alt 3921 8 + 205944 AAAAAATA s panTro5.chr4 192791900 7 + 194502333 -AAAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680683 8 + 195804263 AAAAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717955 8 + 4876863 AAAAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602537 8 + 115148730 AAAATATA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189544067 8 - 190850796 AAAAAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034405 8 - 14256875 AAGAAATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923002 8 - 2196201 AAAAAATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316736 8 - 5030052 AAAAAATA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16846719 8 - 59632846 AGAAAATA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155399 1 - 11315646 I a score=9779.000000 s hg38.chr4_KI270789v1_alt 3929 4 + 205944 GATC s panTro5.chr4 192791907 4 + 194502333 GATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680691 4 + 195804263 GATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717963 4 + 4876863 GATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602545 4 + 115148730 GATC i nomLeu3.chr7b C 0 C 0 s cebCap1.NW_016107886v1 923010 4 - 2196201 GATC i cebCap1.NW_016107886v1 C 0 I 3 s aotNan1.NW_018492112v1 3316744 4 - 5030052 GATC i aotNan1.NW_018492112v1 C 0 I 3 s canFam3.chr16 16846727 4 - 59632846 GATT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e saiBol1.JH378165 13034413 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e macFas5.chr5 187831899 162 + 189454096 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155399 1 - 11315646 I a score=10539.000000 s hg38.chr4_KI270789v1_alt 3933 11 + 205944 Tggccggtgtg s panTro5.chr4 192791911 11 + 194502333 TGGCTggtgtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680695 11 + 195804263 Tggccggtgtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717967 11 + 4876863 TGGCTggtgtg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602549 11 + 115148730 Tggccagtgcg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187832061 10 + 189454096 Tggccgg-gtg i macFas5.chr5 I 162 I 2 s canFam3.chr16 16846731 11 - 59632846 TGAACAAAATA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e chlSab2.chr7 134204780 177 + 135778131 I e cerAty1.NW_012001672v1 3247428 199 + 4669795 I e macNem1.NW_012013133v1 24213056 184 - 25927173 I e rheMac8.chr5 188884440 184 + 190429646 I e otoGar3.GL873580 11155399 1 - 11315646 I a score=18055.000000 s hg38.chr4_KI270789v1_alt 3944 4 + 205944 gtgg s panTro5.chr4 192791922 4 + 194502333 gtgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680706 4 + 195804263 gtgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717978 4 + 4876863 gtgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602560 4 + 115148730 gtgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884624 4 + 190429646 gtgg i rheMac8.chr5 I 184 C 0 s macFas5.chr5 187832073 4 + 189454096 gtgg i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24213240 4 - 25927173 gtgg i macNem1.NW_012013133v1 I 184 C 0 s cerAty1.NW_012001672v1 3247627 4 + 4669795 gtgg i cerAty1.NW_012001672v1 I 199 C 0 s chlSab2.chr7 134204957 4 + 135778131 gtgg i chlSab2.chr7 I 177 C 0 s canFam3.chr16 16846742 4 - 59632846 AAGG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e colAng1.NW_012116221v1 767316 188 + 2368649 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155399 1 - 11315646 I a score=392328.000000 s hg38.chr4_KI270789v1_alt 3948 97 + 205944 --ctcaggcctgtaatcccagcactctgggaggcc-aagacgggtggatcacctgaggtcaggagtt-tgtgaccagcctggacaacatggtgaaaccccg s panTro5.chr4 192791926 97 + 194502333 --ctcaggcctgtaatcccagcactctgggaggcc-aagacgggtggatcacctgaggtcaggagtt-tgtgaccagcctggccaacatggtgaaaccctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680710 97 + 195804263 --ctcaagcctgtaatcccagcactctgggaggcc-aagacgggtggatcacctgaggtcaggagtt-tgtgaccagcctggccaacatggtgaaaccccg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3717982 97 + 4876863 --ctcaggcctgtaatcccagcactctgggaggcc-aagacgggtggatcacctgaggtcaggagtt-tgtgaccagcctggccaacatggtgaaaccccg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602564 97 + 115148730 --ctcacacctgtaatcccagcactctgggaggcc-aagatgggtggatcacctgaggtcaggaggt-cgtgaccagcctggccaacgtggtgaaaccccg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884628 96 + 190429646 --ctcacacctgtaatcccagcactctgggaggcc-aaggcgggaggatcacctgaggtcaagagt--catgaccagactggccaacatggtgaaactccg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832077 95 + 189454096 --ctcacacctgtaatcccagcactttgggaggcc-aaggcgggaggatcacctgaggtcaagagt--catgaccagactggccaacat-gtgaaactccg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213244 96 - 25927173 --ctcacacctgtaatcccagcactttgggaggcc-aaggcgggaggatcacctgaggtcaagagt--catgaccagactggccaacatggtgaaactcca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247631 96 + 4669795 --ctcacacctgtaatcccagcactttgggaggcc-aaggcgggaggatcacctgaggtcaagagt--catgaccagactggccaacatggtgaaactccg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134204961 96 + 135778131 --ctcacgcctgtaattccagcacttctggaggcc-aaggcgggaggatcacttgacgtcaggagt--catgaccagactggccaacagggtgaaaccctg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767504 99 + 2368649 --ctcacgcctgtaatcccagcactttgggaggccaaaggtgggaggatcacctgaggtcaggagtcacatgaccagactggccaacatggcgaaaccccg i colAng1.NW_012116221v1 I 188 C 0 s canFam3.chr16 16846746 63 - 59632846 AAATGATACATAGAAACCCCATA-TGTGAGGAGCT-A---------------------TCAGTAAT--GG-----AGAATGAATAAAAATGCA-------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155399 1 - 11315646 I a score=100930.000000 s hg38.chr4_KI270789v1_alt 4045 18 + 205944 tttctaccaaaaaataca s panTro5.chr4 192792023 18 + 194502333 tttctaccaaaaaataca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680807 18 + 195804263 tttctaccaaaaaataca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718079 18 + 4876863 tttctaccaaaaaatacg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602661 18 + 115148730 tttctactaaaaaataca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884724 18 + 190429646 tctctactaaaaaataca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832172 18 + 189454096 tctctactaaaaaataca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213340 18 - 25927173 tctctactaaaaaataca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247727 18 + 4669795 tctctactaaaaaataca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205057 18 + 135778131 tctctactaaaaaataca i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767603 18 + 2368649 tctctactaaaaaataca i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11155400 18 - 11315646 ttttttttaaaaaatata i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16846809 17 - 59632846 TTTCT-TAAAAAAATGCA i canFam3.chr16 C 0 I 166 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=8526.000000 s hg38.chr4_KI270789v1_alt 4063 2 + 205944 aa s panTro5.chr4 192792041 2 + 194502333 aa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680825 2 + 195804263 aa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718097 2 + 4876863 aa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602679 2 + 115148730 ca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884742 2 + 190429646 aa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832190 2 + 189454096 aa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213358 2 - 25927173 aa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247745 2 + 4669795 aa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205075 2 + 135778131 aa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767621 2 + 2368649 aa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11155418 2 - 11315646 GA i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846826 166 - 59632846 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=676943.000000 s hg38.chr4_KI270789v1_alt 4065 165 + 205944 aacttagctgggtgtggtggcgggcaactgtaatcccagctactcaggaggctgaggcaggagggctgcttgaacccaggaggagggggatgcagtgagctgagatcgtgccactgcactccagtctgggtgacagagcaagactccatctcaaaaataaataa----a s panTro5.chr4 192792043 165 + 194502333 aacttagctgggtgtggtggcgggcacctgtaatcccagctacttgggaggctgaggcaggagggctgcttgaacccaggaggaggaggatgcagtgagctgagatcacgccactgcactccagtctgggtgacagagcaagactccatctcaaaaataaataa----a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680827 165 + 195804263 aacttagctgggtgtggtggcgggcacctgtaatcccagctactcaggaggctgaggcaggagggctgcttgaacccaggaggagggggatgcagtgagctgagattgtgccactgcactccagtctgggtgacagagcaagactccatctcaaaaataaataa----a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718099 165 + 4876863 aacttagctgggtgtggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagggctgcttgaatccaggaggtggagaacgcagtgagctgagatcacgccactgcactccagtctgggtgacagaccaagactccatctcaaaaataaataa----a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602681 164 + 115148730 aaattagctgggtgtggtggtgggcacctgtaatcccagctactcgggaggctgaggcaggatggttgcttgaacccaggaggaggagggtgcagtgagctgagatcgcgccactgcactccagcctgggtgacagaccaagactccatctc-aaaataaataa----a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884744 158 + 190429646 aaattagctgggtttgttggtgggtgcctgtaatcccagctacttgggaggctgaggcaggagaagtgcttgaacctgggaggtggagtttgcagtgagccgagattgcaccactgcactccagcctgggtgacaaagcaagactccatctc-------aataa----a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832192 158 + 189454096 aaattagctgggtttgttggtgggtgcctgtaatcccagctacttgggaggctgaggcaggagaagtgcttgaacctgggaggtggagtttgcagtgagccgagattgcaccactgcactccagcttgggtgacaaagcaagactccatctc-------agtaa----a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213360 158 - 25927173 aaattagctgggtttgttggtgggtgcctgtaatcccagctacttgggaggctgaggcaggagaagtgcttgaacctgggaggtggagtttgcagtgagccgagattgcaccactgcactccagcctgggtgacaaagcaagactccatctc-------aataa----a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247747 158 + 4669795 aaattagctgggtttgttggtgggtgcctgtaatcccagctacttgggaggctgaggcaggagaagtgcttgaacctgggaggtggagtttgcagtgagccgagattgcaccactgcactgcagcctgggtaacaaagcaagactccatctc-------aataa----a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205077 162 + 135778131 aaattagctgggtgtgttggtgggtgcctgtaatcccagctacttgggaggctgaggcaggacaattgcttgaacccgggaggtggagtttgcagtaagccgagattgcaccactgcactccagcctgggtgacaaagcaagactccatctc-------aataaataca i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767623 156 + 2368649 aaattacctggg--tgttggtgggtgcctgtaatcccagctatttgggaggctgaggcaggagaattgcttgaacccgggaggtggagtttgcagtgagccaagattgcactactgcactccagcctgggtgacaaagcaagactccatctc-------agtaa----a i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16846826 166 - 59632846 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155420 0 - 11315646 C a score=52838.000000 s hg38.chr4_KI270789v1_alt 4230 20 + 205944 taaataaataaaaaTAAATC s panTro5.chr4 192792208 16 + 194502333 taaataaataaaaaTA---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192680992 20 + 195804263 taaataaataaaaaTAAATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718264 20 + 4876863 taaataaataaataaaAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602845 20 + 115148730 taaaTAAGTATAAATAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884902 18 + 190429646 taaataaataata--aaaTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832350 18 + 189454096 taaataaataata--aaaTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213518 18 - 25927173 taaataaataata--aaaTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247905 18 + 4669795 taaataaataata--aaaTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205239 18 + 135778131 taaataaataata--aaaTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767779 18 + 2368649 taaaTGAATAATA--AAATA i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16846992 18 - 59632846 caaattaaaaaaaataaa-- i canFam3.chr16 I 166 C 0 e calJac3.chr3 189544075 0 - 190850796 C e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e mm10.chr8 86477657 548 - 129401213 I e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e saiBol1.JH378165 13034413 0 - 14256875 C e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155420 0 - 11315646 C a score=30140.000000 s hg38.chr4_KI270789v1_alt 4250 4 + 205944 GATC s panTro5.chr4 192792224 4 + 194502333 GATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681012 4 + 195804263 GATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718284 4 + 4876863 GATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602865 4 + 115148730 GATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884920 4 + 190429646 GATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832368 4 + 189454096 GATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213536 4 - 25927173 GATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247923 4 + 4669795 GATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205257 4 + 135778131 GGTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767797 4 + 2368649 GGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544075 4 - 190850796 GATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034413 4 - 14256875 GATC i saiBol1.JH378165 C 0 C 0 s mm10.chr8 86478205 4 - 129401213 GATT i mm10.chr8 I 548 C 0 e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16847010 0 - 59632846 C e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11155420 0 - 11315646 C a score=12149.000000 s hg38.chr4_KI270789v1_alt 4254 2 + 205944 TG s panTro5.chr4 192792228 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681016 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718288 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602869 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884924 2 + 190429646 TG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832372 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213540 2 - 25927173 TG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247927 2 + 4669795 TG i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134205261 2 + 135778131 TG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767801 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544079 2 - 190850796 CA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13034417 2 - 14256875 CA i saiBol1.JH378165 C 0 I 1 s otoGar3.GL873580 11155420 2 - 11315646 TG i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86478209 2 - 129401213 TA i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 923014 3 - 2196201 I e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e canFam3.chr16 16847010 0 - 59632846 C e aotNan1.NW_018492112v1 3316748 3 - 5030052 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=36703.000000 s hg38.chr4_KI270789v1_alt 4256 5 + 205944 AAAAA s panTro5.chr4 192792230 4 + 194502333 -AAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681018 4 + 195804263 -AAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718290 4 + 4876863 -AAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602871 4 + 115148730 -AAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884926 5 + 190429646 AAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832374 5 + 189454096 AAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213542 5 - 25927173 AAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247930 5 + 4669795 AAAAA i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134205263 4 + 135778131 -AAAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767803 4 + 2368649 -AAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544082 5 - 190850796 AAAGA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13034420 5 - 14256875 AAAGA i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 923017 5 - 2196201 AAAGA i cebCap1.NW_016107886v1 I 3 C 0 s aotNan1.NW_018492112v1 3316751 5 - 5030052 AAAGA i aotNan1.NW_018492112v1 I 3 C 0 s otoGar3.GL873580 11155423 4 - 11315646 GAAC- i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86478211 5 - 129401213 AAAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16847010 5 - 59632846 aaata i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17450953 101 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=477882.000000 s hg38.chr4_KI270789v1_alt 4261 46 + 205944 -AAAATTAAGGAAATGATGACTAGAAACTTCACAAGTGAGAAGTTAT s panTro5.chr4 192792234 46 + 194502333 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681022 46 + 195804263 -AAAATTAAGGAAATGATGACTAGAAACTTCACAAGTGAGAAGTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718294 46 + 4876863 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602875 46 + 115148730 -AAGATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884931 46 + 190429646 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832379 46 + 189454096 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213547 46 - 25927173 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247935 46 + 4669795 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205267 46 + 135778131 -ACAATTAAGGAAATGATGACTAGAAACTACACAAGTGAGAAGTTAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767807 39 + 2368649 -AAAATTAAGGAAATGATGACTAGAAACTACACAAGTGAG------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544087 44 - 190850796 -AAAATT-AGGAAATCATGAATAGAAACTACAC-AGTGAGAAGCTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034425 46 - 14256875 -CAAATTAAGGAAATGATGAATAGAAACTACACAAGTGAGAAGTTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923022 46 - 2196201 -AAAATTAAGGAAATCATGAATAGAAACTACACAAGTGAGAAGTTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316756 46 - 5030052 -AAAATTAAGGAAATCATGAATAGAAACTACACAAGTGAGAAGCTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451054 46 - 93316391 -AAAATAAAGGAAATGACGACTAGAAACTACATAAGTGAAGAGTTAT i micMur3.chr14 I 101 I 280 s otoGar3.GL873580 11155427 45 - 11315646 -AAAATGAAGGAATTGCTGAGTAGAAACTACACAAGT-AGGAGTTGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478216 42 - 129401213 -AAAATAAAGGAAATGGTTAACAGAAACAAT----GTAAGGAGTTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16847015 9 - 59632846 aaaaaTAAA-------------------------------------- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e dasNov3.JH570353 1337090 584 - 2520184 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=2078623.000000 s hg38.chr4_KI270789v1_alt 4307 241 + 205944 TTGTCCAGGAGAATCGGTGACTTACTGTATTTCTTTTAG--TTAGATTGTATCAAGGTATGATTACAAAAATCAATAACAATTTTATAGAAAATAAACAGAGAAGCAACAAGCTAAACCTATTGAGAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATACAG----------TATTA-TTTATAAAACTGTAATAGATAAGAGTCAGGTATACAG----------TATACATTTCAAAGTATTACCAC--------------AGTATTTACAGTT s panTro5.chr4 192792280 247 + 194502333 TTGTCCGGGAGAATGGGTGACTCACTGTATTTCTT------TTAGATTGTATCAAGGTATGATTACAAAAATCGATAACAATTTTATAGAAAATAAACAGAGAAGCAACAAGCTAAACCTACTGAGAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATACAG----------TATTA-TTTATAAAACTGTAATAGATAAGAGTCAGGTATACAG----------TATACATTTCAAAGTATTACCACAGCAATGA----ATAGTATTTACAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681068 252 + 195804263 TTGTCCGGGAGAATGGGTGACTTACTGTATTTCTTTTAG--TTAGATTGTATCAAGGTATGATTACAAAAATCAATAACAATTTTATAGAAAATAAACAGAGAAGCAACAAGCTAAACCTATTGAGAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATACAG----------TATTATTTTATAAAACTGTAATAGATAAGAGTCAGGTATACAG----------TATACATTTCAAAGTATTACCACAGCAATGA----ATAGTATTTACAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718340 251 + 4876863 TTGTCTGGGAGAATGGGTGACTTACTGTATTTCTTTTAC--TTAGATTGTATCAAGGTATGATTACAAGAATCAATAACAATTTTATAGAAAATAAACAGAGAAGCAACAAGCTAAACCTATTGAGAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATACAG----------TATTA-TTTATAAAACTGTAATAGATAAGAGTCAGGTATACAG----------TATACATTTCAAAGTATTACCACAGCAATGA----ATAGTATTTACAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112602921 247 + 115148730 TTGTCCGGGAGACTGGGTGACTTACTGTATTTCTTTTAG--TTAGATTGTATCAAGGTATGATTATAAAAATCAATAACAATTTTATAGAAAAT----AGAGAAGCAACAAGCTAAACCTACTGAAAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATACAG----------TATTA-TTTATAAAACTGTAATAGATAAGAGTCTGGTATATAG----------TATACATTTCAAAGTATTACCGTAGCAATGA----ATAATATTTACAGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188884977 249 + 190429646 T----TGGGAGAATGGGTGACTTACTGTATTTCTTTAAG--CTAGATTACGTCAAGGTCCGATTACAAAAATCAGTAACAATTTTATAGAAAATAAATAGAGAAGCAACAAGGTAAGCCTATTGAGAGAACATAACTTGACTATC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTATAAAATTGTAATAGGTA--AGTCTGCTCTACAG----------TATACATTTCAAAGTATCACCACACCAATGAAGAGAGAGCATTTTCAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832425 249 + 189454096 T----TGGGAGAATGGGTGACTTACTGTATTTCTTTAAG--CTAGATTACGTCAAGGTCCGATTACAAAAATCGGTAACAATTTTATAGAAAATAAATAGAGAAGCAACAAGGTAAGCCTATTGAGAGAACATAACTTGACTATC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTATAAAATTGTAATAGGTA--AGTCTGCTCTACAG----------TATACATTTCAAAGTATCACCACACCAATGAAGAGAGAGCATTTTCAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213593 249 - 25927173 T----TGGGACAATGGGTGACTTACTGTATTTCTTTAAG--CTAGATTACGTCAAGGTCCGATTACAAAAATCAGTAACAATTTTATAGAAAATAAATAGAGAAGCAACAAGGTAAGCCTATTGAGAGAACATAACTTGACTATC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTATAAAATTGTAATAGGTA--AGTCTGCTCTACAG----------TATACATTTCAAAGTATCACCACACCAATGAAGAGAGAGCATTTTCAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3247981 249 + 4669795 T----TGGGAGAATGGGTGACTTACTGTATTTCTTTAAG--CTAGATTACGTCAAGGTCCGATTACAAAAATCAATAACAATTTTATAGAAAATAAATAGAGAAGCAACAAGGTAAGCCTATTGAGAGAACATAACTTGACTATC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTATAAAATTGTAATAGGTA--AGTCTGCTCTACAG----------TATACATTTCAAAGTATCACCACACCAATGAAGAGATAGCATTTTCAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205313 244 + 135778131 TTGTCTGGGAGAATGGGTGACTTACTGTATTTCTTTAAG--CTAGACTATGTCAAGGTCCAATTACAAAAATGAGTAACAATTTTATAGA----AAATAGAGAAGCAACAAGGTAAGCCTATT--GAGAACATAACTTGACTGTC---------------ATTTTATGTATATA-ATGCAG-------------TG-TTTATAAAACTGTAATAGATA--AGTCTGCTATACAG----------TATACATTTCAAAGTATCACCATACCAATGAAGAGATAGCATTTTCAATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 767846 242 + 2368649 -----------AATGGGTGACTTACTGTATTTCTCTAAG--CTAGACTATGTCAAGGTCCGATTACAAAAATGAATAACAATTTTATAGAAAATAAATAGAGAAGCAACAAGGTAAGCCTATTGAGAGAACATAACTTGACTATC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTTTAAAACTGTAATAGATA--AGTCTGCTATACAG----------TATACATTTCAAAGTATCACCACACCAATGAATAGATAGCATTTTCAGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544131 246 - 190850796 TTTTCTGGGAGAATGGGTGACTTACCGTATTTCTTTGAG--TTAGATTGT---AAGGCACAATT--AAAACTCAATAACAATACTATAGAAAATAAACAGAGAGGCAACAAGCTAAACCTATTGAGATAACACCATTTGATTGTC---------------ATTTTATGTATATA-ATGCAG----------TGCTG-TTTACAAAACTGTAATAGATAAGAGTCCAATATACAG----------CATACATTTCAAAGCATTATCATAGCAATGA----ATAGTATTTACAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034471 246 - 14256875 TTGTCTGGGAGAATGGGTGACTTACCGTATTTCTTTGAA--TTAGACTGT---AAGGTACAATC--AAAAATCAATAACAATACTGTAGAAAATAAACAGAGAGGCAACAAGCTAAACCTACTGAGATAACATCGTTTGATTGTC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTACAAAACTGTAATAGATAAGAGTCCAGTATACAG----------TATACATTTCAAAGCATTATCATAGCAATGA----ATAATATTTACAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923068 245 - 2196201 TTGTCTGGGAGAGTGGGTGACTTACCGTATTTCTTTGAG--TTAGATTGT---AAGGTATAATT--AAAAATCAATAACAATACTATAGCAAATAAACAGAGAGGCAACAAGCTAAAACTATTCAGATAATATCATTTGATTGTC---------------ATTTTATGTATATA-ATGCAG----------TGTTG-TTTACAAAACTATAATAGA-AAGAGTACAGTATACAG----------TATACATTTCAAAGCATTATCATAGCGATGA----ATAGTATCTACAGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3316802 246 - 5030052 TTGTCTGGGAGAATGGGTGACTTACCGTATTTCTTTGAG--TTTGATTGT---AAGGTACAATT--AAAAATCAATAACAATACTATAGAAAATAAACAGAGAGGCAACAAGCTAAGCCTATTGAGATAACATCATTTGATTGTC---------------ATTTTATGTATATG-ATGCAG----------TGTTG-TTTACCAAACTGTAATAGATAAGAGTCCAGTATACAG----------TATACATTTCAAAGCATTATCATAGTGACGA----GTAGTATTTACAATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11155472 264 - 11315646 CGCTGTGGGTGGATGACTAACTTACTATGTTTCTTTGGG--CTACATGGTATCATGGCACAATTATAAAAATCAATAACAATATAACATAAAAGAAATAGAGATGCAACAATTTAAAGCTATTGCAAGAATATCACTTTTGTTTCTATATCATATTGATGGTTTTATGTGTATATATAATG----------TAATA-TTTACAGAAATGTGATAGATAATTCTCTGATAGACAT----------TATGGATTCCAA---GTTATTGCAGCAATAA----ATGGTATTTGGACTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478258 243 - 129401213 ---TAGTGGAAAAAAGAGAAATTACTGTATTTCCTCTGGGTTTAGAGGACACCTAGCCACCATTACACAAATCAATGATAGCATGATGTCAAATAAACAAAG--GGAACACATTAAAGCTATTGAAGGAA-----------TGTT---------------ATTAGGCATGTAGA-GTGTG--------------TG-CTCACAAAAGTTTACTAGGTAACAGTAGTACATATAGTTATTAAATTTATACATTTCAAATCCTTATTGCAGCAATAA----AGAGGATTTACAGTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16847024 225 - 59632846 -------------------------TGCATTTCTTTGTG--CTAAATGGCAGCAAGGCACAATTGCA-AAATCAGTATCAATGTAATA-----TAAACAGAGATGCAACAATTTAAAGCTATTGAGAGAATCTCATTAGATTGTC---------------ATTTTATGCATATA-ATTCAGTATTATTTAGTATTA-TTTACAAAA-----ATAGGTGACATTCTGGTATATAT----------TATACATTTCAAAATATTATTACATTAATAA----GTAGAATTTATAGTA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e micMur3.chr14 17451100 280 - 93316391 I e dasNov3.JH570353 1337090 584 - 2520184 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=210914.000000 s hg38.chr4_KI270789v1_alt 4548 19 + 205944 ATCTATAATTGTAGAGTTG s panTro5.chr4 192792527 19 + 194502333 ATCTATAATTGTAGAGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681320 19 + 195804263 ATCTATAATTGTAGAGTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718591 19 + 4876863 ATCTATAATTGTAGAGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603168 19 + 115148730 ATCTATAATTGTAGAGTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885226 19 + 190429646 ATTTGTAATTGTAGAGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832674 19 + 189454096 ATTTGTAATTGTAGAGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213842 19 - 25927173 ATTTGTAATTGTAGAGTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248230 19 + 4669795 ATTTGTAATTGTAGAGTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205557 19 + 135778131 ATCTGTAATTGTAGAGTTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768088 19 + 2368649 ATCTGTAATTGTAGAGTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544377 19 - 190850796 ACCTATAATCGTAGAGTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034717 18 - 14256875 A-CTATAATTGTAGAGTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923313 19 - 2196201 ACCTGTAATTGTAGAGTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317048 19 - 5030052 ACCTATAATTGTAGAGTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451380 19 - 93316391 ATCTATAATTTTAGGATCA i micMur3.chr14 I 280 C 0 s otoGar3.GL873580 11155736 19 - 11315646 ATCTATAATTTTAGAAGCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478501 19 - 129401213 ACCAGCAATTTCAGAGTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16847249 19 - 59632846 ATCTCCAATTTTAAAGTGA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3864074 728 + 3993831 I e dasNov3.JH570353 1337090 584 - 2520184 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=1400757.000000 s hg38.chr4_KI270789v1_alt 4567 128 + 205944 TTAACATGTACTTTTATCTGGATTTCTTACCTTAACAAAATACGGTCACTCTATCAAT---CTCAG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAACTTTGAGTCTTT---AT-AAGGTCATAT--ACTCATT s panTro5.chr4 192792546 78 + 194502333 TTAACATGTACTTTTATCTGGATTTCTTACCTTAACAAAATACGGTCAC------------------------------------------------------TTGAGTCTTT---AT-AAGGTCATAT--ACTCAtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681339 128 + 195804263 TTAACATGTACTTTTATCTGGATTTCTTACCTTAACAAAATACGGTCACTCTATCAAT---CTCAG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAACTTTGAGTCTTT---AT-AAGGTCATAT--ACTCATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718610 128 + 4876863 TTAACATGTACTTTTATCTGGATTTCTTACCTTAACAAAATTCGGTCACTCTGTCAAT---CTCAG-AGAAATGTCTGGGCAATCAGTATTCTGGTGTTAACTTTGAGTCTTT---AT-AAGGTCATAT--ACTCATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603187 128 + 115148730 CTAACATGTACTTTTATTTGGATTTCTTACCTTAACAAAATATGGTCAGTCTATCAAT---CTCAG-AGAAATGTCTGTACAATTAGTATTTTGGTGTTAACTTTGAGTCTTT---AT-AAGGTCATAT--ACTCATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885245 123 + 190429646 TTAACGTGTACTTTTATTTGGATTTCTTACCTTAACAAAATACAGTC-CTTTATCTA-------AG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATTT--ACTCATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832693 123 + 189454096 TTAACGTGTACTTTTATTTGGATTTCTTACCTTAACAAAATACAGTC-CTTTATCTA-------AG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATTT--ACTCATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213861 117 - 25927173 TTAACGTG------AATTTGGATTTCTTACCTTAGCAAAATACAGTC-CTTTATCTA-------AG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATTA--ACTCATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248249 127 + 4669795 TTAACGTGTACTCTTATTTGGATTTCTTACCTTAACAAAATACGATC-CTTTATCTAT---CTCAG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATTT--ACTCATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205576 128 + 135778131 TTAACGTGTACTTTTATTTGGATTTCTTACCTTAACAAAATACGGTCACTCTATCGAT---CTCAG-AGAAATGTCTGTGCAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATAT--ACTCATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768107 128 + 2368649 TTAATGTGTACTTTTATTTGGATTTCTTACCTTAACAAAATACGGTCACTCTATCGAT---CTCAG-AGAAATGTCTGCACAATTAGTATTTTGGTGTTAAGTTTGAGTCTTT---AT-AAGGCCATAT--ACTCCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544396 123 - 190850796 TTCACATGTTATTTTATTTGGATCT-----CTTAACAAAATACGGTCACTCTATCAAT---CCCAG-AGAAACGTCTCTGCAATTAGTATTTTGGTGTTGACTTTGAGTCTTT---AT-AAGGGCATAT--ACTCATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034735 129 - 14256875 TTAACATGTTATTTTATTTGGATCTCTTACCTTAACAAAATACGGTCACTCTATCAAT---CCCAG-AGAAATGTCTCTGCAATTAGTATTTTGCTGTTGACTTTGAGTCTTT---AT-AAGGGCATAT-AACTCATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923332 128 - 2196201 TTAACATGTTATTTTATTTGGATCTCTTACCTTAACAAAATATGGTCACTCTATCAAT---CCCAG-AGAAATGTCTCTGCAGTTAGTATTTTGGTGTTGACTTTGAGTCTTT---AT-AAGGGCATAT--ACTCATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317067 128 - 5030052 TTAACATGTTATTTTATTTGGATCTCTTACCTTAACAAAATATGGTCACTCTATCAAT---CCCAG-AGAAATGTCTCTGCAATTAGTATTTTGGTGTTGACTTTGAGTCTTT---AT-AAGGGCATAT--ACTCATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451399 130 - 93316391 TTAACATGGCCTTTTATTTGTATCTCTTACTTTAAC-AAATATGATCACTTTATCAAT---CTCAG-AAAAATTTCTGTGCAATTAGGGGTTCAGTGTTGACTTTGAGCCTTTACAAT-AAGGTCATAT--ACTCATT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3864802 133 + 3993831 TTAACATGTCCTTTTATTTGCATCTCTGACCTTAAC-AAATATGATCACTCTATCAATCTCCTCGG-AAAAATTTCTGTGCAATTAGAGTTTTGGTGTTGACTTTGAGCCTTTACAAT-AAGGTCATAT--ACTCATT i proCoq1.NW_012145301v1 I 728 C 0 s otoGar3.GL873580 11155755 120 - 11315646 TTAACATATCCTTTTATTTGCATCTCTTACCTTAAC-AAATAGAATGA--TTATCAAT---CTC---------TTCTGTGCAATTAGCATTTTGGGGATGAGTTTGAGCCTTTATAAC-GAGTTCGTAT--ACTCATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478520 130 - 129401213 CTAATATTT--CTTCATTTG--CCTCCTACCTTAACAAAATATGAACACTTTGTCAATCTCCTCAG-AGAAATTTCTGGGCAATTAACATTCTGGTGTTGACTTTGAGCCTTT---ATAAAGGTTATATCCACTAATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16847268 129 - 59632846 CTAACATATCCTTTTATTTGCATCTTTTACCTTAACAAAATATGATCACTCTATCAAT---TTCGTCAGAAATATCTATGCAATTAGCACTTTGGCGTTGACCTGGAGCCTTT---AT-AAGGTCATAT--GCTAATT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1337090 584 - 2520184 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=40602.000000 s hg38.chr4_KI270789v1_alt 4695 4 + 205944 -TTTC s panTro5.chr4 192792624 4 + 194502333 -tttc i panTro5.chr4 C 0 I 4593 s panPan2.chr4 192681467 4 + 195804263 -TTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718738 4 + 4876863 -TTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603315 4 + 115148730 -TTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885368 4 + 190429646 -TTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832816 4 + 189454096 -TTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213978 4 - 25927173 -TTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248376 4 + 4669795 -TTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205704 4 + 135778131 -TTTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768235 4 + 2368649 -TTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544519 4 - 190850796 -TTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034864 4 - 14256875 -TTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923460 4 - 2196201 -TTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317195 4 - 5030052 -TTTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451529 4 - 93316391 -TTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3864935 4 + 3993831 -TTTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11155875 4 - 11315646 -TTAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478650 4 - 129401213 -TTTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16847397 3 - 59632846 -TTC- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1337674 4 - 2520184 TTTT- i dasNov3.JH570353 I 584 C 0 e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=5925384.000000 s hg38.chr4_KI270789v1_alt 4699 439 + 205944 AAAA-CGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATCGTACAAGGAATTATCACTAACAAAGGAATAAGGATTTTGAAGGCCGTTCTCAAGGAAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAG---GGGATGGCTGATATCAAAGGAACGGTG--GAG-TCTTTCTGCT----TCCAGTACAGGATGGAGCACAAAGCAAGATTGATTGTCATGTTTTACCTGCAATCAGGGTGA--------GGG--AAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGAGCTTTTGTTTCACAGTGATGTTTGCTTTCATTTATACACATTCCTGATT s panTro5.chr4 1706958 435 - 194502333 AAAAAGGAAAAG-TATT-CCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----AATCTCCTTCAGCACAATTT-AATTTCAAAATGCTGCAATACC-AGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATCGTACAAGGAATTATCACTAACAAAGGAA-AAGGATTTTGAAGGCCGTTCTCAAGGAGAG-CCCGCATTGTTGAGTAGGAGTAAT-CTCAG---GGGATGGCTGATATCAAAGGAACAGTG--AAG-TCTTTCTGCT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGCAATCAGGGTGG--------GGG--AAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGAGCTTTTGTTTCACAGTGATCTTTGCTTTCATTTATACACATTCCTGATT i panTro5.chr4 n 4593 C 0 s panPan2.chr4 192681471 438 + 195804263 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATCGTACAAGGAATTATCACTAACAAAGGAATAAGGATTTTGAAGGCCGTTCTCAAGGAAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAG---GGGATGGCTGATATCAAAGGAACAGTG--GAG-TCTTTCTGCT----TCGAGTACAGGATGGAGCACAAAGCAAGATTGATTGTCATGTTTTACCTGCAATCAGGGTG---------GGG--AAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGAGCTTTTGTTTCACAGTGATCTTTGCTTTCATTTATACACATTCCTGACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3718742 439 + 4876863 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCGCATCGTACAAGGAATTATCACTAACAAAGGAATAAGGATTTTGAAGGCCGTTCTCAAGGAAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAG---GGGATGGCTGATATCAAAGGAACAGTG--GAG-TCTTTCTGCT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGCAATCAGGGTGG--------GGG--AAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGAGCTTTTGTTTCACAGTGATCTTTGCTTTCATTTATACACATTCCTGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603319 439 + 115148730 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATACTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATCCTACAAGGAATTATCACTAACAAAGGAATAAAGATTTTGAAGGCGGTTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--GAG-TCTTTCTGCT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG--AAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTAGAGATTAGAGCTTTTGTTTCACAGTGATCTTTGCTTTCATTTATACACATTCCTGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885372 440 + 190429646 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATACTGCAATACTCAGACCACAATCCTATCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGAATACGGATTTTGAAGGCCATTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTACT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG-AAAAAAATGAAAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGCGCTTTTGTTTCACAGCGGTCTTTGCTTTCATTTATACACATTCCTGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187832820 440 + 189454096 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATACTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGAATACGGATTTTGAAGGCCATTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTACT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG-AAAAAAACGAAAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGCGCTTTTGTTTCACAGCGGTCTTTGCTTTCATTTATACACATTCCTGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24213982 440 - 25927173 AAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAAATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATACTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGAATACGGATTTTGAAGGCCATTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTACT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG-AAAAAAACGAAAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATGAGCGCTTTTGTTTCACAGCGGTCTTTGCTTTCATTTATACACATTCCTGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248380 440 + 4669795 AAAA-GAAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATACTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGAATACGGATTTTGAAGGCCGTTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTACT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG-AAAAAAACGAAAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGCGCTTTTGTTTCACAGCGGTCTTTGCTTTCATTTATACACATTCCTGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134205708 443 + 135778131 AAAA-GGAAAAGTTATTTTCACTG--T--A--GTAAGATGTCTGTTGAGAAAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTGCAATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGCATACGGATTTTGAAGGCCATTCTCAAGGCAAGAGCCGCATTGTTGAGTAGGAGTAAT-CTCAAGGGGGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTGCT----TCGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG--AAAAAACGAAAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGCGCTTTTGTTTCACAGCGATCTTTGCTTTCATTTATACACATTCCTGATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768239 439 + 2368649 AAAA-GGAAAAG-TATTTCTACTG--T--A--GAAAGATGTCTGTTGAGAAAA-TAA----ATTTCCCTTCAGCACAATTTTAATTTCAAAATACTGCCATACCCAGACCACAATCCTAGCTAGCATT-AAGAAAAATCACATTGTACAAGGAATTATCACTAACAAAGGAATACGGATTTTGAAGGCCATTCTCAAGGCAAGAGCTGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCTGATATCAAAGGAGCAGTG--AAG-TCTTTCTGCT----TTGAGTACAGGATGGAGCACAAAGCAAGACTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG--AAAAAACGAGAGGACTTTTCAAGAGTTGAAGGAAAAGGCTTTAAGGCAG-AACAAGTGGAGATTAGCGCTTTTGTTTCACAGTGACCTTTGCTTTCATTTATACACATTCCTGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544523 399 - 190850796 TAAA-GGAAAAG-TATTTCCACTT--T--A--GAAAGATGCCTGTTGAA-CAA-TAC----ATCTCCCTTCAGCACAATTTTAATTTCAACATGGTAAAATATGCGGACCACA-------------------------------------------ATCACTACCAGA-GAAGAAGGATTTCGAAGGCCATTCTCAAGGCAAGAGCTGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCGGATACCGGAGGAGCAGTG--AAG-TCTTTCTGCCGCCGGCGAGTGCAGGCCAGAGCACAAAGCAAGATTGATTGTCACGTTTTACCTGTAATCAGGGTGA--------GGGAAAAAACACGAAAGGGCTTTTCAAGAGTTGAAGGTAAAGGCTTTAAGGTAG--A-AAGTGGAGATTAGAGCTTTTGTGTCACACTGATATTTGCTTTCATTTATACACATTCCTGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13034868 440 - 14256875 TAAA-GGAAAAG-TATTTTCACTG--T--A--GTAAGATGTCTGTTGAG-CAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTAAGATATGCAGACCACAATCCTAGCTAGCATTAAAAAAAAATCACGTCGTACAAGGAATTATCACTAACAAAGGAATAAGGATTTCGAAGGCCATTCTCAAGGCAAGAACTGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCAGATATCAAAGGAGCAGTG--AAG-TCTTTCTGCT----GTGAGTGCACGCTAGAGCACAAAGCAAGATTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGGCAAAAAAACGAAAGGGCTTTTCAAGAGTTGAAGGTAAAGGCTTTAAGGTAG-AA-AAGTGGAGATGAGAGCTTTGGTTTCACACTGATATTTGCTTTTATTTAAACACATTCCTGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923464 438 - 2196201 TAAA-GGAAAAG-TATTTCCACTG--T--A--GAAAGATGTCTATTGAG-AAA-TAA----ATCTCCCTTCAGCACAATTTTAATTTCAAAATGCTAAAATACACAGACCACAATCCTAGCTAGCGTT-AAAAAAAATCACATCGAACAAGGAATTATCACTAACAAAGGAATAAGGATTTCGAAGGCCATTCTCAAGGCAAGAGCTGCATTGTTGAGTAGGAGTAAT-CTCAA---GGGATGGCGGATATCAAAGGAGCAGTG--AAG-TCTTTCTGCT----GTGAGTACAGGCTAGAGCACAAAGCAAGATTGATTGTCATGTTTTACCTGTAATCAGGGTGA--------GGG-AAAAAAATGAAAGGGCTTTTCAGGAGTTGAAGGTAAAGGCTTTAAGGTGG-AA-AAGCGGAGATGAGAGCTCTTGTTTCACACTGATGTTTGCTTTCATTTATACACATTCCTGATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317199 442 - 5030052 TAAA-GGAAAAG-CGTTTCTGCTG--T--A--GAAAGATATTTGTTGAG-CAA-TAA----ATCTCCCTTCAGCACAATCTTAATTTCAAAATGCTAAAATACGCAGACCACAATCCTAGCTAGCGTT-AAAAAAAATCACATCGTACAAGGAATTATCACTAAGAAAGGAATAAGGATTTCGAAGGCCATTCTCAAGGCAAGAGCTGCATTGTTGAGTAGGAGCAAT-CTCAA---GGGATGGCGGATATCACAGGAGCAGTG--AAG-TCTTTCTGCTGCCTCCAAGTACAGGCAGGAGCACAAAGCAAGACTGATTGTCACATTTGACCTGTAATCTGGGTGA--------GGG-AAAAAAACGAAAGGGCTTTTCAAGAGTTGAAAGTAAAGGCTTTAAGGTAG-AA-AAGTGGAGATTACAGCTTTCGTTTCACACTGATACTTGCTTTCATTTATACACATTCCTGATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451533 436 - 93316391 AAAA-GAAAAAG-TATTTCCACTG--TATA--GAAAGATGTCTGTTGAGAAAA-CAGATCTATCTCCCACAGGCACAGTTTTAATTTCAAAATGCTAAAATATGCGGACCACAATCCTAGCTAGTATT-AAGACAAATCACATTGTACAAGGAATTATCGCTAAGAAAGGAATGAGG-TTCTGAAGGCCATTCCCTAGGCAGGAGCCGCGTTGTTGAGGAGGAGCTGT-CTCAA---GGGATGGCTGATATCAAAGGA------------TCTTTCTACT----TTAAGAACAAGATAGAGCACAGAGCAAGATTGATTGTCATGTTTTAAGTGTAATCAGGGCGA--------GGG-AAAAAATTGAAAAGGCTTTTCAAGAGTTGAAGGAAAAGACCTTAAGACAG-AACCAATGGAGATTAGAGCTTTTGTTTCACAGCAATACTTGCTTTCACTTATAGACATTCCTGGTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3864939 428 + 3993831 ACAA-GAAAATG-TATTTCCACTG--TATA--GAAAGATGTCTGTTGAGAAAA-CAG----ATCTCCCATAGGCACAGTTTTGATTTCGAAATGCTAAAATATGCAGACCACAATCCTAGCTAGTATT-AAGACAAATCACATTGTACAAGGAATTATCACTAACAAAGGAAGGAGG-TTCTGAAGGCCATTCCCAAGACAAGAGCCGCGTTGCTGAGGAGGAGTCGT-CTCCA---GGGATGGCTGATATCAAAGGA------------TTTTTCTACT----TTAAGAACAGGATAGAGCACAGAGCAA----GATTGTCATGTTTTAAGTGTAATCAGGGTAA--------GGG-AAAAAATTGAAAGGGCTTTTCAAGAGTTGAAGGAAAAGACCTTAAGACAG-AACCAATGGAGATTAGAGCTTTCGTTTCACAGCCGTACTTGCTTTCACTTATACACATTCCTGATT i proCoq1.NW_012145301v1 C 0 I 171 s otoGar3.GL873580 11155879 414 - 11315646 AAAA-GAAAAAG-TATTTTTATGA--TACA--GAAAGATGTCTGTTGGGAAAA-CAA----ATCTCCTGTAGGCACAATTTTAATTTCAAATTACTAAAATAGTCAGACCACAATCCTA-CTAGTTTT-AAGAAAAATCTCATCATACAAGGAATTATCAGTAA------------------------CATTTCCAAGGCAAGAGCAGC--TGCTGAGGAGGCGTCGT-GGAAA---GGGATGGCTGATGTCAAAGGA------------ATTTTCTACT----TCAAGTACAGGACAGAGCACAGAGCAAGATTGATTGTCATGTTTTATGTGTACTCGGGGGAGGGAGGGTTGGG-GGGACCATGAAAGGGCTTTTCAAGAGGGGAAGG-AAAGACCTCAAAACAGAAACCAGTGGAGATTAGAGCTTTTGCCTCACAGCAGCACTTGTTTTCACTTATTCACAGTCGTGATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86478654 426 - 129401213 AAAG-GAAAAAA-TAGTTCTACTC--T--ATTGAAAGATGCCTGCTGAGAAAC-TAA----CTCTCCCATAGGCATCATTTTAATATCAAAATGCTCTAATACGCAGACCACAATCCTAGATAGTATT-AAGAAAAACCACAGGGTACTAGGAATTATCATCAACAAAGGA-------TTATCAAGGCCACATTCAAG-TGAGAACAGCTTTGCTCAGAAGGGGTGATGCTCTG---AAGACATGTGATATGAATGGAACAGGGGAAAA-TTCTGCTAAT--------GTACAGGAAAGAGGACAGGGAAAGATTGATTGTCATATTTTAACTAAAATCAGACTGT--------GGA--AAAAAATGAAAGGGCTTTTCAGGGATTGAA-GAGAAGACTTCAAGACAA-TCCATG----GATTAAGGTTGTTGTTT-ATAGTGGTATTTGCTTTAACTTGTGGGCATTTTTGACT i mm10.chr8 C 0 C 0 s canFam3.chr16 16847400 433 - 59632846 AAAG-GGAAAAG-CATTTCCACTG--TACA--GAAAGA----TGTTGAGAAAAGGAA----ATCTCCCATGGACACAGTTTTAATTTCCAAATGTTCAGACACCCAGACCACAGTCCTAGTTAGTGTT-AAGAAAAATCACATCATGCAGAGAATTAGCACTAACAAAGGAACAAGGATTCTGAAGGCTATTCCCAAGGCAAGAGCAGTATTGTTG---AGGGGTAAT-CTCAA---AGGATGGTTGATTTCAAA-GAGCAGTG--AAGTTTTTTCTGCT----TCAAGTACAGGATAGAGCACAGAGCAAGACTGATTGTCATGTTTTAAGTGTAATCAGGGTGA--------GAG--AAAAAGTGAAAGGGCTTTTTAAGACTTGAAGAAAAAGACCTTAAG--AA-AATCAATGGGGATTAGAGCTTTTGTTTCATAGTGATATCTGCTTTTATTTATATACATTCTTGATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1337678 432 - 2520184 -GAC-ATGAAGA-TATTTCCACTGGCT--A--GAAAGAAGCATGTCGGAAAAG---A----ATGCTTCCACAGCACAATTTTAATTTCAAAAGGTTAAAACACTTAGGCCACAGTCTTAGCCAGTATA-A--GAAGATCACTTCATAGGAAGAGTTCACACCAACAAAGGAAAAAGGATTCTGAAGGCCATTCCCAAAGCAAAG--TGCTACCCCGGGGAGGGCTGAT-CTCAA---AGGTTGGCTGATTTCAAAGGAGCGGTG--AAA-TCTTTCTGCT----TCAAATACA-GAGGGCACACAGAGCAAGATTCATTATCATGTTTTAAGTGGAATCGGGGTGA--------GGG--AAAAAGGTAAAGGGTTCTTCAACAGTTGACGAGAAAGACCTT-AGACTG-ACTCAAAGGAGATTAGAGCTTTTGCTTCTCAGTGATATTTGCTTCCATTTCTGTATGTTCCTGATT i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=-30224.000000 s hg38.chr4_KI270789v1_alt 5138 5 + 205944 TA---------------TAC s panTro5.chr4 1707393 5 - 194502333 TA---------------TAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681909 5 + 195804263 TA---------------TAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719181 5 + 4876863 TA---------------TAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603758 2 + 115148730 T------------------C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885812 20 + 190429646 TATATAAATGATATGGCTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833260 20 + 189454096 TATACAAATGATATGGCTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214422 20 - 25927173 TATACAAATGATATGGCTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248820 20 + 4669795 TATACAAATGATATGGCTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206151 20 + 135778131 TATACAAATGACATGGCTAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768678 20 + 2368649 TATACAAATGATATGGCTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544922 10 - 190850796 TATACAGGCG---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13035308 10 - 14256875 TATACAGACG---------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923902 10 - 2196201 TATACAGACG---------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317641 10 - 5030052 TACACAGATG---------- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17451969 5 - 93316391 ---------------CATAC i micMur3.chr14 C 0 I 512 s otoGar3.GL873580 11156293 5 - 11315646 ---------------CCTAC i otoGar3.GL873580 C 0 I 15 s mm10.chr8 86479080 16 - 129401213 AATATAAGTGAAATGT---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16847833 20 - 59632846 AATACAAATGATACGGTTAC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338110 5 - 2520184 ---------------AATAC i dasNov3.JH570353 C 0 I 13 e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=350901.000000 s hg38.chr4_KI270789v1_alt 5143 33 + 205944 TTAATAACATGAAAGTGGCTAATTTTCCTATTC s panTro5.chr4 1707398 33 - 194502333 TTAATGACATGAAAGTGGCTAATTTTCCTATTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681914 33 + 195804263 TTAATGACATGAAAGTGGCTAATTTTCCTATTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719186 33 + 4876863 TTAATGACATGAAAGTGGCTAATTTTCCTATTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603760 33 + 115148730 TTAATGACATGAAAGTGGCTAATTTTCCTATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885832 33 + 190429646 TTAATGACATGAAAGTAGCTAATTTTCCTATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833280 33 + 189454096 TTAATGACATGAAAGTAGCTAATTTTCCTATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214442 33 - 25927173 TTAATGACATGAAAGTAGCTAATTTTCCTATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248840 33 + 4669795 TTAATGACATCAAAGTAGCTAATTTTCCTATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206171 33 + 135778131 TTAATGACATGAAAGTGGCTAATTTTCCTATTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768698 33 + 2368649 TTAAAGACATGAAAGTGGCTAATTTTCCTATTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544932 30 - 190850796 ---ATGACATGATAGTGGCTGATTTTCCTATTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13035318 30 - 14256875 ---ATGACATGATGGTGGCGAATTTTCCTATTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923912 30 - 2196201 ---ATGACATGATAGTGGCTAATTTTCCTATTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3317651 29 - 5030052 ---ATGACGTGATAGTGGCTAATTTTCCTATT- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11156313 32 - 11315646 TTAGTGACACGGAAGT-GCTAGTTTTCTTGTTA i otoGar3.GL873580 I 15 C 0 s mm10.chr8 86479096 33 - 129401213 CTGCCAACTTGAAAATGTTTTTTTTTTCTTTTC i mm10.chr8 C 0 I 1688 s canFam3.chr16 16847853 32 - 59632846 TTAGTGACATAAAAGTGGCTAATTTTCTTAGT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338128 33 - 2520184 TTAGTGACATGAAAATGACTAATTTTCCAGTTA i dasNov3.JH570353 I 13 C 0 e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=364236.000000 s hg38.chr4_KI270789v1_alt 5176 33 + 205944 GTAAAAAATATTGCTAAGTGTG-CAAATATGAAT- s panTro5.chr4 1707431 33 - 194502333 GTAGAAAATATTGCTAAGTGTG-CAAATATGAAT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681947 33 + 195804263 GTAGAAAATATTGCTAAATGTG-CAAATATGAAT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719219 33 + 4876863 GTAGAAAATATTGCTAAGTGTG-CAAATATGAAT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603793 33 + 115148730 GTAGAAAACATTGCTAAGTGTG-CAAATATGAAT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885865 33 + 190429646 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833313 33 + 189454096 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214475 33 - 25927173 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248873 33 + 4669795 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206204 33 + 135778131 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768731 33 + 2368649 ATTGAAAATATTGCTAAGTGTG-CAAATATGAAT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544962 33 - 190850796 GCAGAAAATATTGCTAAGTGTG-CAAATATGAAT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13035348 33 - 14256875 GTAGAAAATATTTCTAAGTGTG-CAAATATGAAT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 923942 33 - 2196201 CTAGAAAATATTGCTAAGTGTG-CAAATATGAAT- i cebCap1.NW_016107886v1 C 0 I 2059 s aotNan1.NW_018492112v1 3317680 31 - 5030052 --AGAAAATATTGCTAAGTGTG-CAAATATGAAT- i aotNan1.NW_018492112v1 C 0 I 2074 s otoGar3.GL873580 11156345 34 - 11315646 GTTGCAAATACTGTTAAGTGTGCCAAATATAAAA- i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16847885 32 - 59632846 -TAAAAAATACTGCAAAGTGTC-CAAATATGAAA- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1338161 34 - 2520184 GTATAATGTGCTGCTAATTGTG-CAAATATGAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e mm10.chr8 86479129 1688 - 129401213 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=65127.000000 s hg38.chr4_KI270789v1_alt 5209 7 + 205944 TACTCAC s panTro5.chr4 1707464 7 - 194502333 TACTCAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681980 7 + 195804263 TACTCAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719252 7 + 4876863 TACTCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603826 7 + 115148730 TATTCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885898 7 + 190429646 TATTCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833346 7 + 189454096 TATTCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214508 7 - 25927173 TATTCAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248906 7 + 4669795 TATTCAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206237 7 + 135778131 TATTCAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768764 7 + 2368649 TATTCAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189544995 7 - 190850796 AATTCAC i calJac3.chr3 C 0 I 2035 s saiBol1.JH378165 13035381 7 - 14256875 TATTCAC i saiBol1.JH378165 C 0 I 2038 s otoGar3.GL873580 11156380 7 - 11315646 TAGTCAC i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16847918 7 - 59632846 TATCCAC i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1338195 7 - 2520184 TATTCAC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=249344.000000 s hg38.chr4_KI270789v1_alt 5216 44 + 205944 ----TGCT----TCTCTTTAAATGTACTCAGTTAACAGGTCAGGttttcttt s panTro5.chr4 1707471 44 - 194502333 ----TGCT----TCTCTTTAAATGTACTCAGTTAACAGGTCAGGTTTTCttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192681987 44 + 195804263 ----TACT----TCTCTTTAAATGTACTCAGTTAACAGATCAGGttttcttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719259 44 + 4876863 ----TGCT----TCTCTTTAAATGTACTCAGTTAACAGGTCAGGTTttcttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603833 44 + 115148730 ----TGCT----TCTCTTTAAATTTATTCAGTTAACAGGTAAGtttttcttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885905 44 + 190429646 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCAGGTTTGCttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833353 44 + 189454096 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCAGGTTTGCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214515 44 - 25927173 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCAGGTTTGCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248913 44 + 4669795 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCAGGTTTGCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206244 44 + 135778131 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCAGGTTTGCTTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768771 44 + 2368649 ----TGCT----TCTCTTTAAATTTACTCAGTTAACATGTCGGGTTTGCttt i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11156387 48 - 11315646 ----TGCTCGACTCTCTTTTGATTTGCTCTACTAATGTGTAAAGCTTGCttt i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16847925 44 - 59632846 ----TGCT----TAAGTCTTAATTCATTCTGCTAACATGTCAGGTTTGGGTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338202 43 - 2520184 TACTTGAC----TGCCTTTTAATTCACTCTGCCAACCTGTCAGGGtt----- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M a score=-28900.000000 s hg38.chr4_KI270789v1_alt 5260 10 + 205944 tttaa-----------------------ttt-----tt s panTro5.chr4 1707515 21 - 194502333 tttaa------------tttttttttttttt-----tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192682031 23 + 195804263 tttaa----------tttttttttttttttt-----tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719303 19 + 4876863 tttaa--------------tttttttttttt-----tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603877 33 + 115148730 tttaatttttttttttttttttttttttttt-----tt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885949 22 + 190429646 ttaat----------tta-tttttttctatt-----tt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833397 23 + 189454096 TTAAt----------ttattttttttctatg-----tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214559 28 - 25927173 TTAAT----------TTAttttttttctatgttttttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248957 27 + 4669795 TTAAt----------ttattttttttctatg-tttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206288 13 + 135778131 TAAAt----------tttttt---------------tt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768815 5 + 2368649 tta---------------------------------at i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16847969 10 - 59632846 ---------------TTGGTTTTTT------------- i canFam3.chr16 C 0 I 347 s dasNov3.JH570353 1338245 10 - 2520184 --------------tttaattttt-------------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11156435 0 - 11315646 C a score=6006.000000 s hg38.chr4_KI270789v1_alt 5270 1 + 205944 t s panTro5.chr4 1707536 1 - 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192682054 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719322 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603910 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885971 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833420 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214587 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248984 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206301 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768820 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1338255 1 - 2520184 t i dasNov3.JH570353 C 0 I 8 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e canFam3.chr16 16847979 347 - 59632846 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11156435 0 - 11315646 C a score=1062515.000000 s hg38.chr4_KI270789v1_alt 5271 242 + 205944 ttttttgagaccagagtctcactctgtaccccaggctgaagtgcagtggcgcgatcttg--------gctcactgcaaactccgcctcccaggttcaagtgattcttctgcctcagcctcctaagtagctgggattacaggcatgtgcccctacgcccagctaatttttgaatttttagtagagacggggtttcaccatgttggctaggctggtcttgatcccttgacctcgtgatccg-------cctgcctcggc s panTro5.chr4 1707537 242 - 194502333 ttttttgacaccggagtctcactctgtaccccaggctgaagtgcagtggcgcgatctcg--------gctcactgcaaactccgcctcccaggttcaagtgattcttctgcctcagcctcctaagtagctgggattacaggcatgtgcccctacgcccagctaatttttgaatttttagtagagacggggtttcaccatgttggctaggctggtcttgatcccttgacctcgtgatctg-------cctgcctcggc i panTro5.chr4 C 0 n 0 s panPan2.chr4 192682055 242 + 195804263 ttttttgagaccagagtctcactctgtaccccaggctgaagtgcagtggcgcgatctcg--------gctcactgcaaactccgcctcccaggttcaagtgattcttctgcctcagcctcctaagtagctgggattacaggcatgtgcccctacgcccagctaatttttgaatttttagtagagacggggtttcaccatgttggctaggctggtcctgatcccttgacctcgtgatccg-------cctgcctcggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719323 242 + 4876863 ttttttgagaccagagtctcactctgtaccccaggctgaagtgcagtggcgcgatctcg--------gctcactgcaaactccgcctcccaggttcaagtgattcttctgcctcagcctcctaagtagctgggattacaggcatgtgcccctatgcccagctaatttttgaatttttagtagagacggggtttcaccatgttggctaggctggtcttgatcccttgacctcatgatccg-------cctgcctcggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112603911 242 + 115148730 ttttttGATACcagagtctcactctgtcccccaggctggagtgcagtggtgcaatctcg--------gctcactgcaaactccgcctcccaggttcaagcgattcttctgcctcagcctcctgagtagttgagattacagatgtgtgccaccatgcccagctaatttttgtatttttagtagagacggggtttcaccatgttgaccaggatgatcttgatcccttgacctcatgatccg-------cctgccttggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188885972 257 + 190429646 ttttttgagaccagattctcactctgtcacccagactggagtgcagtggcatgatctcgacttctcagctcactgcaacttccacctcccaggttcaagcgagtcttctgcctcagcctcccgagtagctggaattataggcatgtgccaccattctcagctaatttttgtatttttagtagagatgggatttcaccatattgaccaggatggtcttgatcccttgacctcatgatccatgatccacttgccttggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833421 257 + 189454096 ttttttgagaccagattctcactctgtcacccagactggagtgcagtggcatgatctcgacttctcggctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcctcccgagtagctggaattataggcatgtgccaccattctcagctaatttttgtatttttagtagagatgggatttcaccatattgaccaggatggtcttgatcccttgacctcatgatccatgatccacttgccttggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214588 254 - 25927173 ttttttgagaccagattctcactctgtcacccagac-ggagtgcagtggcatgatctcgacttctc-gctcaccgcaacctccacctcccaggttcaagcgattcttctgcctcagcctccgcagtagctggaattataggcatgtgccaccattc-cagctaatttttgtatttttagtagagatgggatttcaccatattgaccaggatggtcttgatcccttgacctcatgatccatgatccacttgccttggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3248985 257 + 4669795 ttttttgagaccagattctcactctgtcacccagactggagtgcagtggcatgatctcgacttctcggctcactgcaacctccacctcccaggttcaagcgattcttctgcctcagcctcccgagtagctggaattataggcatgtgccaccattctcagctaatttttgtatttttagtagagatgggatttcaccatattgaccaggatggtcttgatcccttgacctcatgatccatgatccacttgccttggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206302 251 + 135778131 ttttttaagaccagattctcactctgtcacccaggctggagtgcagtggcatgatctcggcttctcggctcactgca------acctcccaggttcaagtgattcttctgcctcagcttcctgagtagctgggattataggcatgtgccaccattctcagctaatttttgtatttttagtagagatgggattttgccatattgacccggatggtcttgatcccttgacctcatgatccatgatccacctgctttggc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 768821 257 + 2368649 ttttttgagaccagattctcactctgtcacccaggctggagtgcagtggcatgatctcggcttctcggctcactgcaacttccacctcccaggttcaagcgattcttctgcctcagcctcccgagtagttgggattataggcatgtgccacaattctcagctaatttttgtatttttagtagagatgggatttcaccatattgatcaggatggtcttgatcccttgacctcatgatccgtgatccacttgccttggc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e dasNov3.JH570353 1338256 8 - 2520184 I e canFam3.chr16 16847979 347 - 59632846 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11156435 0 - 11315646 C a score=499937.000000 s hg38.chr4_KI270789v1_alt 5513 118 + 205944 ctccaaaagtgctgggattacaggcgtgaaccactgtgcct-ggccTTAA--------TTCTTTTTTTTTTTTT----AATTagcaaacgaaacaatcaacaaggtgaagagacagcccacagaacgggag s panTro5.chr4 192797221 121 + 194502333 ctccaaaagtgctgggattacaggcgtgaaccactgtgcct-ggccttaa--------ttctttttttTTTTTTTTT-AATTagcaaacgaaacaatcaacaaggtgaagagacagcccacagaacgggag i panTro5.chr4 I 4593 C 0 s panPan2.chr4 192682297 122 + 195804263 ctccaaaagtgctgagattacaggcgtgaaccactgtgcct-ggccTTAA--------TTCTTTTTTTTTTTTTTTCAAATTagcaaacgaaacaatcaacaaggtgaagagacagcccacagaacgggag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719565 118 + 4876863 ctccaaaagtgctgggattacaggcgtgaaccactgtgcct-ggccTTAA--------TTCTTTTTTCTTTTTT----AATTagcaaacgaaacaatcaacaaggtgaagagacagcccacagaacgggag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112604153 118 + 115148730 ctccaaaagtcctgggattacaggcgtgaaccactgtgccc-agccTTAA--------TTCATTTTTTTTTTTT----AATTagcaaaggaaacaatcaacaaggtgaagagaaagcccacggaatgggag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188886229 122 + 190429646 ctccaaaagtgctgggattacaggcgtaagccactgtgcct-ggccTTAAtttttttttttttttttttttttt----AATTagcaaaggaaa----caacaaggtgaagagatagcccacggaatgggag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833678 122 + 189454096 ctccaaaagtgctgggattacaggcgtaagccactgtgcct-ggccTTAAtttttttttttttttttttttttt----AATTagcaaaggaaa----caacaaggtgaagagatagcccatggaatgggag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214842 120 - 25927173 ctccaaaagtgctgggattacaggcgtaagccattgtgcctggGCCTTAA---ttttttttttttttttttttt----AATTagcaaaggaaa----caacaaggtgaagagatagcccacggaatgggag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3249242 115 + 4669795 ctccaaaagtgctgggattacaggtgtaagccactgtgcct-ggccTTAA-------ttttttttttttttttt----AATTagcaaaggaaa----caacaaggtgaagagatagcccacggaatgggag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206553 114 + 135778131 ctccagaagtgctgggattacaggcgtaagccactgtgcct-ggccTTAA--------TTTTTTTTTTTTTTTT----AATTagcaaaggaaa----caacaaggtgaagagatagcccacggaacgggag i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 769078 115 + 2368649 ctccagaagtgctgggattacaggcgtaagccactgtgcct-ggccTTAA-------ttttttttttttttttt----tattagcaaaggaaa----caacaaggtgaagagagagcccacagaaagggag i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e dasNov3.JH570353 1338256 8 - 2520184 I e canFam3.chr16 16847979 347 - 59632846 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e manLeu1.NW_012102221v1 2634939 2060 - 2847728 M e otoGar3.GL873580 11156435 0 - 11315646 C a score=5776404.000000 s hg38.chr4_KI270789v1_alt 5631 1071 + 205944 aaaatatttgcagtttatcgaactgacaagtgattagtaacc-agaatatacaaggagtccaaacaactcaaaaacaaaaaaa-caaataatctgattttaaaataggcaaaagatctgaacagacatttctcaaaagaagagatacaaatggccaacaggtattaaaaaaaagttcaacatcactaatcatcagagaaattcaaatcaaaataatcatgagctatcatctcatcgcacttaaaatggcttttatcaaaaagacaggcaataagggatgctggcaaggatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaattagtacaaccactatggagaacggtttggaggttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcatttccatgtttattgcagcactgttcacaatagccaagatgtgg----aatcaatctaagtgtccatcagcagacga-------atgggtaaatgaaatgtggtacatatat--agagagaatggaatattcttcagccataaaaagaatgaa--------atcatgtcatttacaacaacgtgaatggaa-ctggaggatattatgtgaagtgatgaaataagccaggcacagaaggacaaatattgcatgttcccactcacgtttgggaagtaaaacaatgatcttacggaaatagagagtagaattgtggttatcagagtctggaagggtagtggt--gggggagatgaagaaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaacatagttaacagtaatttattgtgtatttcaaaataactagaagatgggaattggaatgtttctgacacaaagaaatgataaatgcttgaggtgatgggcatccca-ttaccctgatttgatcattacgtgttgtatgtgttgtatgcttatatcaaaatttcacatgtaccccaaaatatggacgactatgatgtattc s panTro5.chr4 192797342 1071 + 194502333 aaaatatttgcagtttatcgaactgacaagtgattagtaacc-agaatatacgaggagtccaaacaactcaaaaacaaaaaaa-caaataatctgattttaaaataggcaaaagatctgaacagacatttctcaaaagaagagatacaaatggccaacaggtattaaaaaaatgttcaacatcactaatcatcagagaaattcaaatcaaaataatcatgagctatcatctcatcccacgtaaagtggcttttatcaaaaagacaggcaataagggatgctggcaaggatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaattagtacaaccactatggagaacggtttggaggctcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcactcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagccaagatgtgg----aatctatctaagtgtccatcagcagacga-------atgggtaaatgaaatgtggtacatatat--agagagaatggaatattcttcagccataaaaagaatgaa--------atcatgtcatttgcaacaacgtgaatggaa-ctggaggatattatgtgaggtgatgaaataagccaggcacagaaggacaaatattgcatgttcccactcacgtttgggaagtaaaacaatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtggt--gggggagatgaagaaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaacatagttaacagtaatttattgtgtatttcaaaataactagaagatgggaattggaatgtttctgacacaaagaaatgataaatgcttgaggtgatgggcatccca-ttaccctgatttgatcattacgtgttgtatgcattgtatgcttatatcaaaatttcacatgtaccccaaaatatggacaactatgatgtattc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192682419 1066 + 195804263 aaaatatttgcagtttatcgaactgacaagtgattagtaacc-agaatatacaaggagtccaaacaactcaaaaac-aaaaaa-caaataatctgattttaaaataggcaaaagatctgaacagacatttctcaaaagaagagatacaaatggccaacaggtattaaaaaaatgttcaacatcactaatcatcagagaaattcaaatcaaaataatcatgagctatcatctcatcccacttaaaatggcttttatcaaaaagacaggcaataagggatgctggcaaggatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaattagtacaaccactatggagaacggtttggaggttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacgatagccaagatgtgg----a----atctaagtgtccatcagcagacga-------atgggtaaatgaaatgtggtacctatat--agagagaatggaatattcttcagccataaaaagaatgaa--------atcatgtcatttgcaacaacgtgaatggaa-ctggaggatattatgtgaagtgatgaaataagccaggcacagaaggacaaatattgcatgttcccactcacgtttgggaagtaaaacaatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtggt--gggggagatgaagaaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaacatagttaacagtaatttattgtgtatttcaaaataactagaagatgggaattggaatgtttctgacacaaagaaatgataaatgcttgaggtgatgggcatccca-ttaccctgatttgatcattacgtgttgtatgtgttgtatgcttatatcaaaatttcacatgtaccccaaaatatggacgactatgatgtattc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3719683 1070 + 4876863 aaaatatttgcagtttattgaactgacaagtgattagtaacc-agaatatacaaggagtccaaacaactcaaaaacaaaaaaa-caaataatctgattttaaaataggcaaaagatctgaacagacatttctcaaaagaagagatacaaatggccaacaggtattaaaaaaatgttcaacatcactaatcatcagagaaattcaaatcaaaataatcatgagctatcatctcatc-cacttaaaatggcttttatcaaaaagacaggcaataagggatgctggcaaggatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaattagtacaaccactatggagaacggtttggaggttcctcaaaaaactaaaaatagacctaccatgtgatccagcaatcccactgggtatatacacaaaagaaaagcactcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgatcacgatagccaagatgtgg----aatcaatctaagtgtccatcagcagacga-------atgggtaaatgaaatgtggtacatatat--agagagaatggaatattcttcagccataaaaagaatgaa--------atcatgtcatttgcaacaacgtgaatggaa-ctggaggatattatgtgaagtgatgaaataagccaggcacagaaggacaaatattgcatgttcccactcacgtttgggaagtaaaacaatgatcttacggaaatagagagtagaattgtggttatcagagtctggaagggtagtggt--gggggagatgaagaaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaacatagttaacagtaatttattgtgtatttcaaaataactagaagatgggaattggaatgttcctgacacaaagaattgataaatgcttgaagtgatgggcatccca-ttaccctgatttgatcattacgtgttgcatgcattgtatgcttatatcaaaatttcacatgtaccccaaaatatggacaactatgatgtattc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112604271 1069 + 115148730 aaaatatttgcaatttatcgaactgacaagtgattagtaagc-agaatatataaggagtccaaacaactcaaaaacaaaaaaa-caaataatctgattttaaaataggcaaaagatctcaacagatatttctcaaaagaagagacacaaatggccaacaggtatttaaaaaatgttcaacatcgctaatcatcagagaaattcaaataaaaatactcatgagctatcatctcatcccacttaaaatggcttttatcaaaaagacaggcaataaggtatgctggcaaggatgtggag----------------aaacgggaaccattgtacactgttggtgggaattaaattagtacaaccactatggagaatggtttggaggttcctcaaaaaactaaaaatagacctgccatatgatccaaaaatcccactggggatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcattgttcacgatagccaagatgtgg----aatcaatctaagtgtccgccagcagctga-------atgggtaaatgaaatgtggtacatatat----agagaatggaatattctttagccatacaaagaatgaa--------gtcatgtcatttgcaacaatgtgaatgcaa-ctggaggatattatgtgaagtgatgaaataagccaggcagagaaggacaaacgttgcatgtcctcactcacatttgggaagtaaaacaatgatcttatggaaatagagagtagaattgcggttatcagagtctggaagggtagtggt--gggggagataaagaaagaattgttaacaggtacaaaaagacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaacctagttaacggtaatttattgtgtatttcaaaataactggaagatcggaattggaatgttcctgacacaaagaagtgataaatgcttcaggtgatgggcatccca-gtaccctgatttgatcgttacgtgttgtacgtgttgtgtgcttatatcaaaatttcacatgtaccccaaaatatgtacaactattatgtattc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188886351 1065 + 190429646 aaaatatttgcagactatctaactgacaggtgattggtaactaagaatatagaaggagtccaaacaactcaaaaacaaaaaaaccaaataatctgattttaaaatagccaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacca---atcagagaaattcaaatcaaaataatcatgagctatcatcccgtcccacttaaaatggcttttatcaaaaagacaggcaatacgggatgct-gcaagaatgtggcg----------------aaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaacggcttcgaggttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtcaagatatgg----a----atctgcgtgtccctcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagagaatggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtaaatggaa-ctggagcatattatgtgaggtgatgaaataagccaaaaacagaaggacaaatactgcatgttctcacttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtgggcagggggagat----aaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcggtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcacagtaactagaagattggaattggaatgttccttacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187833800 1065 + 189454096 aaaatatttgcagactatctaactgacaggtgattggtaactaagaatatagaaggagtccaaacaactcaaaaacaaaaaaaccaaataatctgattttaaaatagccaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacca---atcagagaaattcaaatcaaaataatcatgagctatcatcccatcccacttaaaatggcttttatcaaaaagacaggcaatacgggatgct-gcaagaatgtggcg----------------aaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaacggcttcgaggttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccaggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtcaagatatgg----a----atctgcgtgtccatcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagagaatggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtaaatggaa-ctggagcatattatgtgaggtgatgaaataagccaaaaacagaaggacaaatactgcatgttctcacttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtgggcagggggagat----aaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcggtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcacagtaactagaagattggaattggaatgttccttacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24214962 1082 - 25927173 aaaatatttgcagactatctaactgacaggtgattggtaactaagaatatagaaggagtccaaacaactgaaaaacaaaaaaaccaaataatctgattttaaaatagccaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacca---atcagagaaattcaaatcaaaataatcatgagctatcatcccatcccacttaaaatggcttttatcaaaaagacaggcaatacgggatgct-gcaagaatgtggcgaaaggggaatgtggcaaaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaatggcttcgagtttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtcaagatatgg----a----atctgcgtgtccatcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagagaatggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtaaatggaacctggagcatattatgtgaggtgatgaaataagccaaaaacagaaggacaaatactgcatgttctcacttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtgggcagggggagat----aaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcggtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcacagtaactagaagattggaattggaatgttccttacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3249357 1065 + 4669795 aaaatatttgcagactatctaactgacaggtgattggtaactaagaatatagaaggagtccaaacaactcaaaaacaaaaaaaccaaataatctgattttaaaatagccaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacta---atcaaagaaattcaaatcaaaataatcatgagctatcatcccatcccacttaaaatggcttttatcaaaaagacacgcaatatgggatgct-gcaagaatgtggcg----------------aaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaacggcttcgaagttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtcaagatatgg----a----atctgcgtgcccatcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagagaatggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtaaatggaa-ctggagcatattatgtgaggtgatgaaataagccaacaacagaaggacaaatactgcatgttctctcttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaactgtggttatcagagtctggaagggtagtgagcagggggagat----aaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcggtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcacagtaactagaagattggaattggaatgttcctgacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134206667 1052 + 135778131 aaaatatttgtagactatctaaccgacaggtgattagtaaccaagaatatataaggagtccaaacagctcaaaaac-aaaaaaccaaataatctgattttaaaataggcagaagatctggacagacatttctcaaaagaagagatacaaacagccaacaggtatttaaaaaatgttcaacatcacta---atcagagaaattcaaatcaaaataatcatgagctatcatcccatcccacttaaaatggcttttatcaaaaagacaggcaatatgggatgct-gcaagaatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaacggcttcgaggttcctcaaaaaactaaaaatagacctgccatatgatccagcaatccccccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtgtgcacttccatgttttttgcagcactgttcacaatagtcaagatatgg----a----atctacgtgtccatcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagaga--ggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtgaatggaa-ctggagtatattatgtgaggtgatgaaataagccaacaacagaaggacaaatactgcgtgttctcacttgtatttgggaagtaaaaagatga---tacggaaat--agagtagaattgtggttatcagagtctggaaaggtagtgggca-ggggagat----aaagaattgttaacaggtacaaaaatacatt----tagaaggaataagatgtaatgtttggtagctcaatagggtaaccatagttaatagtagtttattgtgtatttcacagtaactagaagattggaattggaatgttcctgacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattatgtg---------ttgtattcttatatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2637016 1065 - 2847728 aaaatatttgcagactatctaactgacaggtgattggtaactaagaatatagaaggagtccaaacaactcaaaaacaaaaaaaccaaataatctgattttaaaatagccaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacta---atcagagaaattcaaatcaaaataatcatgagctatcatcccatcccacttaaaatggcttttatcaaaaagacaggcaatatgggatgct-gcaagaatgtggag----------------aaaggggaaccattgtacactgttggtgggaattaaactagtacaactactatggagaacggctttgaggttcctcaaaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtgaagatatgg----a----atctgcgtgtccatcagcagacaa-------atgggtgaatgaaatgtggtacatctatagagagagaatggaatattcttcaaccataaaaagaatgaaatcatgccatcatgtcatttgcaacaatgtaaatggaa-ctggagcatattatgtgaggtgatgaaataacccaacaacagaaggacaaatactgcatgttctcacttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtgggcagggggagat----aaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcggtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcacagtaactagaagattggaattggaatgttcctgacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i manLeu1.NW_012102221v1 M 2060 C 0 s colAng1.NW_012116221v1 769193 1079 + 2368649 aagatatttgcagactatctaactgacaggtgattggtaaccaagaatatataaggagtccaaa-aactcaaaaacaaaaaaaccaaatagtctgattttaaaagaggcaaaagatctggacagacatttctcaaaagaagagatacaaatggccaacaggtatttaaaaaatgttcaacatcacta---atcagagaaattcaaatcaaaataatcatgagctatcatcccatcctgcttaaaatggcttttatcaaaaagacaggcaataagggatgct-gcaaggatgtggag----------------aaaggggaaccattgtacaccgttggtgggaattaaactagtacaaccattatggagaacggctgtgaggtgcctcagaaaactaaaaatagacctaccatatgatccagcaatcccaccgggtatatacacaaaagaaaagcaatcagtctattgaagaggtgtctgcacttccatgtttattgcagcactgttcacaatagtcaagatatggaatca----atctatgtgtccatcagcagacaaatgggtgatgggtgaatgaaatgtggtacatctatagagagagaatggaatattcctcaaccataaaaagaatgaaatcatgccatcatgtcatttgcagcaatgtgaatggaa-ctggagcatattatgtgaggtgatgaaataagccaacaacagaaggacaaatattgcatgttctcatttgtatttgggaagtaaaaagatgatcttatggaaatagagagtagaattgtggttatcagagtctggaagggtagtgggcagggggagataaaaaaagaattgttaacaggtacaaaaatacatttagatagaaggaataagatgtaatgttcagtagctcaatagggtaaccatagttaatagtaatttattgtgtatttcatagtaactagaagattggaattggaatgttcctgacacaaagaaatgataaatgcttgaggtgatggatatcccagttaccctgatttcatcattacgtg---------ttgtattcttacatcaaagtttcacatgtaccccaaaatatgtacaactattatgtattc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e dasNov3.JH570353 1338256 8 - 2520184 I e canFam3.chr16 16847979 347 - 59632846 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11156435 0 - 11315646 C a score=74086.000000 s hg38.chr4_KI270789v1_alt 6702 12 + 205944 aaaaactaaaaa s panTro5.chr4 192798413 12 + 194502333 aaaaactaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683485 12 + 195804263 aaaaactaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720753 12 + 4876863 aaaaactaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605340 12 + 115148730 aaaaattaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887416 12 + 190429646 aaaaattaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834865 12 + 189454096 aaaaattaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216044 12 - 25927173 aaaaattaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250422 12 + 4669795 aaaaattaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207719 12 + 135778131 aaaaataaaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638081 12 - 2847728 aaaaattaaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770272 12 + 2368649 aaaaattaaaaa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11156435 12 - 11315646 aaaaaaaaaaaa i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e dasNov3.JH570353 1338256 8 - 2520184 I e canFam3.chr16 16847979 347 - 59632846 I e mm10.chr8 86479129 1688 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=37284.000000 s hg38.chr4_KI270789v1_alt 6714 7 + 205944 taaaaa----A s panTro5.chr4 192798425 7 + 194502333 taaaaa----A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683497 6 + 195804263 t-aaaa----a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720765 7 + 4876863 taaaaa----A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605352 7 + 115148730 taaaaa----A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887428 7 + 190429646 taaaaa----A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834877 7 + 189454096 taaaaa----A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216056 7 - 25927173 taaaaa----A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250434 7 + 4669795 taaaaa----A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207731 7 + 135778131 taaaaA----A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638093 7 - 2847728 taaaaa----A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770284 7 + 2368649 taaaaa----A i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11156447 11 - 11315646 aaaaaacttta i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86480817 7 - 129401213 TAGAAA----T i mm10.chr8 I 1688 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e dasNov3.JH570353 1338256 8 - 2520184 I e canFam3.chr16 16847979 347 - 59632846 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=84987.000000 s hg38.chr4_KI270789v1_alt 6721 12 + 205944 ATTATGAATACG s panTro5.chr4 192798432 12 + 194502333 ATTATGAATATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683503 12 + 195804263 ATTATGAATACG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720772 12 + 4876863 ATTATGAATATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605359 12 + 115148730 ATTATGAATACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887435 12 + 190429646 ATTATGAATATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834884 12 + 189454096 ATTATGAATATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216063 12 - 25927173 ATTATGAATATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250441 12 + 4669795 ATTATGAATATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207738 12 + 135778131 TTGATGAATACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638100 12 - 2847728 ATTATGAATATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770291 12 + 2368649 ATTATGAATACG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11156458 12 - 11315646 attGTCAATGTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86480824 12 - 129401213 GTTATCAACATG i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1338264 12 - 2520184 atCATCAATGTG i dasNov3.JH570353 I 8 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865367 171 + 3993831 I e micMur3.chr14 17451974 512 - 93316391 I e canFam3.chr16 16847979 347 - 59632846 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=205109.000000 s hg38.chr4_KI270789v1_alt 6733 23 + 205944 AGCAACTAGCATCTAGGCAACTG s panTro5.chr4 192798444 23 + 194502333 AGCAACTAGCATCTAGGCAACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683515 23 + 195804263 AGCAACTAGCATCTAGGCAACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720784 23 + 4876863 AGCAACTAGCATCTAGGCAACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605371 23 + 115148730 AGCAACTAGCATCTAGGCAACTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887447 23 + 190429646 AGCAACTAGCATCTAGACAGCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834896 23 + 189454096 AGCAACTAGCATCTAGACAGCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216075 23 - 25927173 AGCAACTAGCATCTAGACAGCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250453 23 + 4669795 AGCAACTAGCATCTAGACAGCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207750 23 + 135778131 AGCAACTAGCATCTAGACAGCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638112 23 - 2847728 AGCAACTAGCATCTAGACAGCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770303 23 + 2368649 AGCAACTAGCATCTAGACAGCTG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17452486 23 - 93316391 AGCAACTAGCATCTAGGCAACCA i micMur3.chr14 I 512 C 0 s proCoq1.NW_012145301v1 3865538 23 + 3993831 AGCAACTAGCATCTAGGCAACCA i proCoq1.NW_012145301v1 I 171 C 0 s otoGar3.GL873580 11156470 20 - 11315646 AGC-ACTAGCATCTAGACA--CA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86480836 16 - 129401213 AGCAGACAGGATCTAG------- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1338276 23 - 2520184 ATCAACCAGCATCTACGAATCGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e canFam3.chr16 16847979 347 - 59632846 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=153155.000000 s hg38.chr4_KI270789v1_alt 6756 13 + 205944 GGTCTGCTCTGTT s panTro5.chr4 192798467 13 + 194502333 GGTCTGCTCTGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683538 13 + 195804263 GGTCTGCTCTGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720807 13 + 4876863 GGTCTGCTCTGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605394 13 + 115148730 GGTCTGCTCTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887470 13 + 190429646 GGTCTGCTTTGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834919 13 + 189454096 GGTCTGCTTTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216098 13 - 25927173 GGTCTGCTTTGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250476 13 + 4669795 GGTCTGCTTTGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207773 13 + 135778131 GGTCTGCTCTGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638135 13 - 2847728 GGTCTGCTCTGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770326 13 + 2368649 GGTCTGCTCTGTT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17452509 13 - 93316391 GGTCTGCTCTGTT i micMur3.chr14 C 0 I 44 s proCoq1.NW_012145301v1 3865561 13 + 3993831 GGTCTGCTCTGTT i proCoq1.NW_012145301v1 C 0 I 3 s otoGar3.GL873580 11156490 13 - 11315646 CGTCTGCTCTGTT i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86480852 12 - 129401213 -GTCTGTTCTACC i mm10.chr8 C 0 I 4 s canFam3.chr16 16848326 13 - 59632846 ggtcagcactgcg i canFam3.chr16 I 347 C 0 s dasNov3.JH570353 1338299 13 - 2520184 GGTCAGCTCTGTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=313591.000000 s hg38.chr4_KI270789v1_alt 6769 51 + 205944 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatgtatta------------------------------------------ s panTro5.chr4 192798480 51 + 194502333 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatgtatta------------------------------------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683551 51 + 195804263 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatgtatta------------------------------------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720820 51 + 4876863 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatgtatta------------------------------------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605407 51 + 115148730 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatgtatta------------------------------------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887483 49 + 190429646 -----------TAATG--ATttcaa-----taattcaacaaatatctgttgactaccactc--atatta------------------------------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834932 49 + 189454096 -----------TAATG--ATTTCAA-----TAATTCAACAAATATCTATTGACTACCACTC--ATATTA------------------------------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216111 49 - 25927173 -----------TAATG--ATttcaa-----taattcaacaaatatctattgactaccactc--atatta------------------------------------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250489 49 + 4669795 -----------TAATG--ATttcaa-----taattcaacaaatatctattgactaccactc--atatta------------------------------------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207786 44 + 135778131 -----------TAATG--ATttcaa-----taattcaacaaatatctattgactaccactc-------a------------------------------------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638148 49 - 2847728 -----------TAATG--ATttcaa-----taattcaacaaatatctattgactaccactc--atatta------------------------------------------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770339 51 + 2368649 -----------TAATG--ATttcaa-----taattcaacaaatatttattgactaccactcatatatta------------------------------------------ i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3865577 54 + 3993831 -----------TTGTT--ATTTCAattaattcattcaacaaatattcattgagtactcctc--atatcg------------------------------------------ i proCoq1.NW_012145301v1 I 3 C 0 s otoGar3.GL873580 11156506 54 - 11315646 -----------CTGTT--ATTTTAattaattcattcagcacatattcattgagtacccctc--atatca------------------------------------------ i otoGar3.GL873580 I 3 C 0 s mm10.chr8 86480868 55 - 129401213 -----------TTATT--ATTTTAATAAattcattcaacaagcatttattgagtatctctcatatgtc------------------------------------------- i mm10.chr8 I 4 C 0 s canFam3.chr16 16848339 38 - 59632846 -----------taatg--tatagaa-----ttgttgaatcagcatgttgta-----cactt-------------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338312 111 - 2520184 TAATATCTTTTTGATGTTAGTTCAATGAatccattcaacaaatattcattgagtactcatcatatatctggGTACACCTAACTTAAGTACCCAGCAATATTTGATGCCATA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17452522 44 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=658709.000000 s hg38.chr4_KI270789v1_alt 6820 72 + 205944 ----gacactaaga------tatttgataa---tgatacaatggtgaatcaacagataaatgattt---atcctgatgcttatacatt s panTro5.chr4 192798531 72 + 194502333 ----gacactaaga------tatttgttaa---tgatacaatggtgaatcaacagataaatgattt---ctcctgatgcttatacatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683602 72 + 195804263 ----gacactaaga------tatttgataa---tgatacaatggtgaatcaacagataaatgattt---ctcctgatgcttatacatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720871 72 + 4876863 ----gacactaaga------tatttgttaa---tgatacaatggtgaatcaacagataaatgattt---ctcctgatgcttatacatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605458 72 + 115148730 ----gacactaaga------tatttgttaa---tgatacaatggtgaatcaacagataaatgattt---ctcctgatgcttatacatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887532 72 + 190429646 ----gacgctaaga------tatttgttaa---tgacacaatggtgaatcaatccataaacgattt---ctcctgatgcttatatatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187834981 72 + 189454096 ----GACGCTAAGA------TATTTGTTAA---TGACACAATGGTGAATCAATCCATAAACGATTT---CTCCTGATGCTTATATATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216160 72 - 25927173 ----gacgctaaga------tatttgttaa---tgacacaatggtgaatcaatccataaacgattt---ctcctgatgcttatatatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250538 72 + 4669795 ----gacgctaaga------tatttgttag---tgacacaatggtgaatcaatccataaacgattt---ctcctgatgcttatatatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207830 72 + 135778131 ----gacgctaaga------tatttgttaa---tgatacaatggtgaatcaatacataaatgattt---ctcctgatgcttatatatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638197 72 - 2847728 ----gacgctaaga------tatttgttaa---tgacacaatggtgaatcaatccataaacgattt---ctcctgatgcttatatatt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770390 72 + 2368649 ----gatgctaaga------tatttgttaa---tgacacaatggtgaatcaatacataaacgattt---ctcctgatgcttatacatt i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17452566 72 - 93316391 ----gacactaaga------tatttgttaa---tgatatagcagtgaatcaatagataaataattc---ttcttgatgcttatacatt i micMur3.chr14 I 44 C 0 s proCoq1.NW_012145301v1 3865631 72 + 3993831 ----gacactaaga------tatttgttaa---tgatacagcagtgaatcaatagataaataattc---ttcttgatgctcatacatt i proCoq1.NW_012145301v1 C 0 I 95 s otoGar3.GL873580 11156560 72 - 11315646 ----gatactagga------tatttgttat---tgatacaacagtgaaacagcacataaatgattc---ctcttgatgcttataCATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86480923 68 - 129401213 --------CTATGA------TATCTGTCAT---TGATGCAATAGTCAATCATTATGTAATCGATTC---TTCCTAAAGCTTCTGCACC i mm10.chr8 C 0 C 0 s canFam3.chr16 16848377 63 - 59632846 ----gaaactaatacaccattgtatgttaa---ttatacataaataaataaataaataaataa------------------ataaata i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338423 80 - 2520184 GACAAATAC--AGG------TATTTGTCAATTTTGATTTAACTGTGAATCAATAGGCCAAGTCTCTGCCCTCCTGATATTTATGCACT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=75006.000000 s hg38.chr4_KI270789v1_alt 6892 10 + 205944 agtaaggAAG s panTro5.chr4 192798603 10 + 194502333 agtaaggAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683674 10 + 195804263 agtaatgaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720943 10 + 4876863 agtaaggaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605530 10 + 115148730 agtaaggaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887604 10 + 190429646 tgtaaggaag i rheMac8.chr5 C 0 I 13 s macFas5.chr5 187835053 10 + 189454096 TGTAAGGAAG i macFas5.chr5 C 0 I 11 s macNem1.NW_012013133v1 24216232 10 - 25927173 tgtaaggaag i macNem1.NW_012013133v1 C 0 I 11 s cerAty1.NW_012001672v1 3250610 10 + 4669795 tgtaaggaag i cerAty1.NW_012001672v1 C 0 I 11 s chlSab2.chr7 134207902 10 + 135778131 tgtaaggAAG i chlSab2.chr7 C 0 I 11 s manLeu1.NW_012102221v1 2638269 10 - 2847728 tgtaaggaag i manLeu1.NW_012102221v1 C 0 I 15 s colAng1.NW_012116221v1 770462 10 + 2368649 cgtaaggaag i colAng1.NW_012116221v1 C 0 I 26 s micMur3.chr14 17452638 10 - 93316391 cgccggggag i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11156632 10 - 11315646 TGCAAGGAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86480991 10 - 129401213 CACTGGGAAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16848440 10 - 59632846 aataaataaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338503 10 - 2520184 AGCAGAGAAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865703 95 + 3993831 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=-30859.000000 s hg38.chr4_KI270789v1_alt 6902 13 + 205944 A-TT---AAAAAAACTC----- s panTro5.chr4 192798613 13 + 194502333 A-TT---AAAAAAACTC----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683684 13 + 195804263 a-tt---aaaaaaacac----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720953 14 + 4876863 attt---aaaaaaacac----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605540 13 + 115148730 a-tt---aaaaaaacaa----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887627 13 + 190429646 T-TT---TAAAAAGCAA----- i rheMac8.chr5 I 13 C 0 s macFas5.chr5 187835074 13 + 189454096 T-TT---TTAAAAGCAA----- i macFas5.chr5 I 11 C 0 s macNem1.NW_012013133v1 24216253 13 - 25927173 T-TT---TAAAAAGCAA----- i macNem1.NW_012013133v1 I 11 C 0 s cerAty1.NW_012001672v1 3250631 15 + 4669795 T-TTAA-AAAAAAGCAA----- i cerAty1.NW_012001672v1 I 11 C 0 s chlSab2.chr7 134207923 13 + 135778131 T-TT---AAAAAAGCAA----- i chlSab2.chr7 I 11 C 0 s manLeu1.NW_012102221v1 2638294 13 - 2847728 t-tt---ttAAAAGCAA----- i manLeu1.NW_012102221v1 I 15 C 0 s micMur3.chr14 17452648 13 - 93316391 ----atgaaaaaaaatc----- i micMur3.chr14 C 0 I 2 s otoGar3.GL873580 11156642 12 - 11315646 ----AC-CAAAAAAATT----- i otoGar3.GL873580 C 0 I 2 s mm10.chr8 86481001 5 - 129401213 ---T---CAAA----------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16848450 10 - 59632846 ----ATGAGAAAAA-------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338513 16 - 2520184 ------ACAAAAAATTAATCAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865703 95 + 3993831 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 770472 26 + 2368649 I a score=504211.000000 s hg38.chr4_KI270789v1_alt 6915 70 + 205944 GTAATCAAGTTAAGTGTGACAGGCATC-ATGTGCTTATTGGAACATGT---AGAA-G-G-GGTTTCT-GTGTCCCTGC s panTro5.chr4 192798626 69 + 194502333 GTAATCAAGTTAAGTGTGACAGGCATC-ATATGCT-ACTGGAACATGT---AGAA-G-G-GGTTTCT-GTGTCCCTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683697 69 + 195804263 gtaatcaagttaagtgtgacaggcatc-atgtgct-attggaacatgt---agaa-g-g-ggtttct-gtgtccctgc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3720967 69 + 4876863 gtaatcaagttaagtgtGACAGGCATC-ATGTGCT-ATTGGAACATGT---AGAA-G-G-GGTTTCT-GTGTCCCTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605553 69 + 115148730 gtaatcaagttaagtgtgacaggcatc-acgtact-attggaacatgt---agaa-g-g-ggtttct-gtgtccctgc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887640 72 + 190429646 GTAAGCAAGTTGAGTGTGACAGGCATC-ACTTGTT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835087 72 + 189454096 GTAATCAAGTTGAGTGTGACAGGCATC-ACTTGTT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216266 72 - 25927173 CTAATCAAGTTGAGTGTGACAGGCATC-ACTTGTT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250646 72 + 4669795 GTAATCAAGTTGAGTGTGACAGGCATC-ACTTGCT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134207936 72 + 135778131 GTAATCAAGTTGAGTGTGACAGGCATC-ACTTGCT-ATTGGAACATGTAGAAGAA-G-G-GGTTTCT-GTGTCCCTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638307 72 - 2847728 GTAATCAAGTTGAGTGTGACAGGCATC-ACTTGCT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770498 72 + 2368649 GTAATCAAGTTGAGTGTGACAGGCATC-ACTTGCT-ATTGGAACATGTAGTAGAA-G-G-GGTTTCT-GTGTCCCTGC i colAng1.NW_012116221v1 I 26 C 0 s micMur3.chr14 17452663 71 - 93316391 gtaataaagtgaaGAGTGATAAGCATCTACTTGTT-ATTGGAACATAT---AGAA-G-T-GGTTTCTAATATCCATGG i micMur3.chr14 I 2 C 0 s otoGar3.GL873580 11156656 71 - 11315646 GTCATCCAGGGAGGAGTGATGAGCCCCAACTTGTT-ATTGGAAGATAC---AGAA-G-A-GATTTCTAATGTTCCTGG i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86481006 71 - 129401213 -TAATAAAAGGAAGAGTGTTAAGTATCAATCTGAT-ATTGGAGGATGT---GCAA-GTT-AGCTTCTAGTGTCCCCAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16848460 60 - 59632846 ------------AGAGCAGAAAGCATTCACATGCT-TTTGGATCATAT---ACAATG-A-GGTTTCGAATGCCCGTGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338529 72 - 2520184 GTAGTCAAATTAAGAATAATAAACACCCACATGTT-CCTAAAACATGT---CGAA-G-GCAGTTTCTAATATCCATGG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865703 95 + 3993831 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=590744.000000 s hg38.chr4_KI270789v1_alt 6985 53 + 205944 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA s panTro5.chr4 192798695 53 + 194502333 AATCAGAACAGGTCTTTATGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683766 53 + 195804263 aatcaggacaggtctttctgagtctgaagtatgaatcagagttaggtaaagca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721036 53 + 4876863 AATCAGGACAGGTCTTTCCGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605622 53 + 115148730 aatcaggacaggtctttctgagtctgaagtatgaatcagagttaggtgaagca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887712 53 + 190429646 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835159 53 + 189454096 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216338 53 - 25927173 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250718 53 + 4669795 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208008 53 + 135778131 CATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638379 53 - 2847728 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770570 53 + 2368649 AATCAGGACAGGTCTTTCTGAGTCTGAAGTATGAATCAGAGTTAGGTAAAGCA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17452734 53 - 93316391 AATCAGGACAGACCTTTCTGAGTTTGAAGTATAAATCAAAGTTAGGTAAAGCA i micMur3.chr14 C 0 I 70 s proCoq1.NW_012145301v1 3865798 53 + 3993831 AATCAGGACAGGCTTTTCTGAGTTTGAAGCATGAATCAAAGTTAGGTAAAGCA i proCoq1.NW_012145301v1 I 95 I 1 s otoGar3.GL873580 11156727 53 - 11315646 AATCAGGGCAACCCTTTCTGAGTTGGAAGTATAAATCAAAGTTAGGTGAAGTG i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86481077 53 - 129401213 ATTAAGAATGGGGTTTTCTAAGAACTAAATCTACATCAGAATAAGATAAAGTA i mm10.chr8 C 0 I 1 s canFam3.chr16 16848520 53 - 59632846 AATTGGGATGGGCCTTTCTGAGACTGAAGTATGAATCAGAGTTAGGTATAACA i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1338601 49 - 2520184 AATCGGAACGGGTCTTTCTGATATCAGAGAACAAATCAGAGTTA----AAGTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=409986.000000 s hg38.chr4_KI270789v1_alt 7038 49 + 205944 -GAGAGGGAAGGCAGTTTA-----------------GTTTCCTTGG----TACAAGACAGTGTATTAAACA s panTro5.chr4 192798748 49 + 194502333 -GAGAGGGAAGGCAGTTTA-----------------GTTTCCTTGG----TACAAGACACTGTATTAAACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683819 49 + 195804263 -gagagggaaggcagttta-----------------gTTTCCTTGg----tacaagacactgtattaaaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721089 49 + 4876863 -GAGAGGGAAGGTAGTTTA-----------------GTTTCCTTGG----TACAAGACACTGTATTAAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605675 49 + 115148730 -gtgagggaaggtagttta-----------------gTTTACTTGG----TACAAGACACTCTATTAAACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887765 49 + 190429646 -GTGAGGGAAGGTAGTTTA-----------------GTTTACTTGG----TACAAGACACAGTATTAAACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835212 49 + 189454096 -GTGAGGGAAGGTAGTTTA-----------------GTTTACTTGG----TACAAGACACAGTATTAAACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216391 49 - 25927173 -GTGAGGGAAGGTAGTTTA-----------------gtttacttgg----tacaagacacagtattaaaca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250771 49 + 4669795 -GTGAGGGAAGGTAGTTTA-----------------GTTTATTTGG----TACAAGACACAGTATTAAACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208061 49 + 135778131 -GTGAGGGAAGGTAGTTTA-----------------GTTTACTTCG----TACAAGACACTGTATTAAACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638432 49 - 2847728 -GTGAGGGAAGGTAGTTTA-----------------GTTTACTTGG----TACAAGACACAGTATTAAACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770623 49 + 2368649 -GTGAGGGAAGGTAGTTTA-----------------GTTTACTTGG----TACAAGACACTGTATTAAACA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3865852 49 + 3993831 -GGAGGGGAAGGTAATGTA-----------------ATTTATTTGT----tacaagatactatatcaaaca i proCoq1.NW_012145301v1 I 1 I 21 s otoGar3.GL873580 11156784 49 - 11315646 -TGGAAGGGAGGGAATGTA-----------------ATGTACTTGT----TACAAGATACTGTATCAAACA i otoGar3.GL873580 I 4 C 0 s mm10.chr8 86481131 51 - 129401213 -ATAGGAGAAGATAATTTA-----------------ACTTATTTAAACACTACA--GTACTATGCTAAATG i mm10.chr8 I 1 C 0 s canFam3.chr16 16848574 49 - 59632846 -GGAGGGGGAGGTAATTTG-----------------ATTTATTTGG----TACAAGATACAGAATTAAACA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1338650 67 - 2520184 GACAGGAGGAGATTGTTTAACAACTACTTTTTGAAGGTTTGCTTGG----TACAAGACATGGAATTAAGTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17452787 70 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=141969.000000 s hg38.chr4_KI270789v1_alt 7087 19 + 205944 CTGCAGTAGAGAGAATTGT s panTro5.chr4 192798797 19 + 194502333 CTGCAGTAGAGAGAGTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683868 19 + 195804263 ctgcagtagagagagttgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721138 19 + 4876863 CTGCAGTAGAGAGAGTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605724 19 + 115148730 CTGCAGTAGAGAGAGTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887814 19 + 190429646 CTGCAGTAGAGAGAGTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835261 19 + 189454096 CTGCAGTAGAGAGAGTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216440 19 - 25927173 ctgcagtagagagagttgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250820 19 + 4669795 CTGCAGTAGAGAGAGTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208110 16 + 135778131 CTGCAGTAGAGAGAGT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638481 19 - 2847728 CTGCAGTAGAGAGAGTTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770672 19 + 2368649 CTGCAGTAGAGAGAGTTAT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11156833 12 - 11315646 GTGCAGTAGATA------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86481182 19 - 129401213 CTGCAATCAACACAATTAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16848623 19 - 59632846 CTGTAATTAATACAGTTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338717 19 - 2520184 TTGCAGTAGAAAGAGTTAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3865901 21 + 3993831 I e micMur3.chr14 17452787 70 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=1422670.000000 s hg38.chr4_KI270789v1_alt 7106 165 + 205944 --AAATGATAATTCTGCACTTACAGAATTTGCAATTGAGTAAATATGAGaatattatctaaatgtactgaatgctcattgtgtgctaggtgtta--ttaaatactttact-tgtattgattcctttaatcctcacaacaactctatgaaggagttactgttattgaccat s panTro5.chr4 192798816 165 + 194502333 --AAATGATAATTCTGCACTTACAGAATTTGCAATTGAGTAAATATGAGaatattatctaaatttactgaatgctcattgtgtgctaggtgtta--ttaaatactttact-tgtattgattcctttaatcctcatgacaactgtatgaaggacttactgttattgaccat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192683887 165 + 195804263 --aaatgataattctgcacttacagaatttgcaattgagtAAATATGAGaatattatctaaatgtactgaatgctcattgtgtgctaggtgtta--ttaaatactttact-tgtattgattcctttaatcctcacaacaactgtatgaaggagttactgttattgaccat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721157 165 + 4876863 --AAATGATAATTCTGCACTTACAGAATTTGCAATTGAGTAAATACGAGaatattatctaaatgtactgaatgctcattgtgtgctaggtgtta--ttaaatactttact-tgtatggattcctttaatcctcacaacaactgtatgaaggagttactgttattgaccat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605743 160 + 115148730 --AAATGATAATTCTGCACTTACAGAATTTGCAATTTAGTAAAAGTGAGaatattatctaaatttagtgaatgctcattgtgtgctaggtgtta--ttaaa-----tact-tgtattgattcctttaatcctcacaacaactgtatgaaggagttactgttattgaccat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887833 165 + 190429646 --AAATGATAAATCTGCACTTACAGAATTTGCAATTCAGTAAAAATGAGaatattatctaaatttactgaatgctcattatgtgctaggtgtta--ttaaataccttact-tctattgatttgtttaatcctcacaacaactgtatgaaggcgttactgttattgaccag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835280 165 + 189454096 --AAATGATAAATCTGCACTTACAGAATTTGCAATTCAGTAAAAATGAGaatattatctaaatttactgaatgctcattatgtgctaggtgtta--ttaaataccttact-tctattgatttgtttaatcctcacaacaactgtatgaaggagttactgttattgaccat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216459 165 - 25927173 --aaatgataaatctgcacttacagaatttgcaattcagtAAAAATGAGaatattatctaaatttactgaatgctcattatgtgctaggtgtta--ttaaataccttact-tctattgatttgtttaatcctcacaacaactgtatgaaggagttactgttattgaccat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3250839 165 + 4669795 --AAATGATAAATCTGCACTTACAGAATTTGCAATTCAGTAAAAATGAGAATATTATCTTAatttactgaatgctcattatgtgctaggtgtta--ttaaataccttact-tctattgatttgtttaatcctcacaacaactgtatgaaggagttactgttattgaccat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208126 162 + 135778131 -----TGATAAATCTGCACTTACAGAATTTGCAATTCAGTAAAAATGAGaatattatctaaatttactgaatgctcattttgtgctaggtgtta--ttaaataccttact-tctattgatttgtttaatcctcacaacaactgtatgaaggagttactgttattgaccat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638500 165 - 2847728 --AAATGATAAATCTGCACTTACAGAATTTGCAATTCAGTAAAAATGAGaatattatctaaatttactgaatgctcattatgtgctaggtgtta--ttaaataccttact-tctgttgatttgtttaatcctcgcaacagctgtatgaaggagttactgttactgaccat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770691 165 + 2368649 --AAATGATAAATCTGCACTTACAGAATTTGCAATTTAGTAAAAATGAGaatattatttaaatttactgaatgcttattatgggctaggtgtta--ttcaataccttact-tgtattgatttgtttaatcctcacaacaactgtatgaaggagttactgttattgaccat i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17452857 166 - 93316391 --AAAAGATAATTCTGCACTAATGGATCTTACAATTTAGTGATAATGAGAATATTATATAAatttactgaatgctcgttgtgtgctaggtgtta-cctaagtactttact-tgcattaattcctttaatcctcataacaactttttgaagaagttactgatatttaccat i micMur3.chr14 I 70 I 2348 s proCoq1.NW_012145301v1 3865922 166 + 3993831 --aaaagataactcggcacttatggatcttacaatttagtAATAATGAGAATGTTATATAAatttactgaatattcattgtgtactaggtgtta-cctaagtacctcact-tgtattaattcctttaatcctcataacaactttttgaagaagttactgttatttaccat i proCoq1.NW_012145301v1 I 21 C 0 s otoGar3.GL873580 11156845 156 - 11315646 --CAGAGAGAATTCTG-----------CTTACCATTTTGTAATAAAGATAATATTATATAAatttactgagcgctctttgtgtgctgggtgtta-cctgagtatctttttgtgtgtcaattcctttaatcccaataacaagtttttgaaggagttactgttacttatcat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86481201 141 - 129401213 -----TAATAATTAAGTACCTA-------TGCAAACTTAGAAATTTCCATATATTATCTAAATGCACAGAACGTTCACTGTGTCCTAGGCACTAATTTATGTATGTGAAT-TGTACTTATTC-TTAAAGCTTCAAAACACATTTGTG--------------ATTTA-CAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16848642 137 - 59632846 ---------AAATCCGTACTTATGGAGCTTACAATTTAGTaataat--------------aatttactaaatgttcattatatactaggtgtta--------accttgct-tgtattaattt-ttggatctttttaacaactatatgaggtagacactattattaactat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338736 160 - 2520184 GAATAAGATAATTTCACACTCACCGAGGTTA-AACTTAGCAATAATGTTaataatactgaaatttgctggatgttcattatatgct----gttatcttaagtacctta---tgtttcagttcattaaatcctcatcgtggttttaggaggtggtta--gttattaacaat i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=196086.000000 s hg38.chr4_KI270789v1_alt 7271 27 + 205944 ctaaaggtgaggaaacagaggaacaga s panTro5.chr4 192798981 27 + 194502333 ctaaaggtgaggaaacagaggaacaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684052 27 + 195804263 ctaaaggtgaggaaacagaggaacaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721322 27 + 4876863 ctaaagatgaggaaacagaggaacaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605903 27 + 115148730 ctaaaggtgaggaaaccaaggaacaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188887998 25 + 190429646 ctaaaggtgaggaaac--aggaacaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835445 25 + 189454096 ctaaaggtgaggaaac--aggaacaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216624 25 - 25927173 ctaaaggtgaggaaac--aggaacaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251004 25 + 4669795 ctaaaggtgaggaaac--aggaacaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208288 25 + 135778131 ctaaagttgaggaaac--aggaacaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638665 25 - 2847728 ctaaaggtgaggaaac--aggaacaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770856 25 + 2368649 ctaaagatgaggaaac--aggaacaga i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3866088 27 + 3993831 ttatagttgagagaacagagaaacaga i proCoq1.NW_012145301v1 C 0 I 6034 s otoGar3.GL873580 11157001 27 - 11315646 tcatagttgagagaagagagaagcaga i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86481342 20 - 129401213 TTAATGATAAGGTAACAGAG------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16848779 27 - 59632846 ttttaggtgaggaaataaaagagcaga i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338896 27 - 2520184 ttacagacaaggaaacagaagcacaga i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17453023 2348 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=174750.000000 s hg38.chr4_KI270789v1_alt 7298 27 + 205944 aataggaagtagcttgcacaGATCTTC s panTro5.chr4 192799008 27 + 194502333 aataggaagtagcttgcacaGATCTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684079 27 + 195804263 aataggaagtagcttgcacaGATCTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721349 27 + 4876863 aataggaagtagcttgcacaGATCTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605930 27 + 115148730 aatagaaagtagcttgcacaGATTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888023 26 + 190429646 aatag-aagtagcttgcacaGATCTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835470 26 + 189454096 aatag-aagtagcttgcacagatcttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216649 25 - 25927173 aatag-aagtagcttgcacaGATC-TC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251029 26 + 4669795 aatag-aagtagcttgcacaGATCTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208313 26 + 135778131 aatag-aagtagcttgcacaggtcTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638690 26 - 2847728 aatag-aagtagcttgcacaGATCTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770881 26 + 2368649 aatag-aagtagcttgcacagatcttc i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11157028 27 - 11315646 gatgttaaataatttgcacagatcttg i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86481362 26 - 129401213 -ATGTTATGTACCTTATATAAATCTTC i mm10.chr8 C 0 I 45 s canFam3.chr16 16848806 26 - 59632846 aatgt-tcaaaacttatacagatcttc i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1338923 27 - 2520184 gctgtcaagtatcttgcctggatgtcc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 7325 1 + 205944 C s panTro5.chr4 192799035 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684106 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721376 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605957 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888049 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835496 1 + 189454096 c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216674 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251055 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208339 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638716 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770907 1 + 2368649 c i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11157055 1 - 11315646 c i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1338950 1 - 2520184 c i dasNov3.JH570353 C 0 I 375 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e canFam3.chr16 16848832 0 - 59632846 C e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=202351.000000 s hg38.chr4_KI270789v1_alt 7326 39 + 205944 TGATCTCCCTCATAGCCAATGACAGGCCTAACATAACAA s panTro5.chr4 192799036 38 + 194502333 TGATCTCCCTCATAGCCAATGACAGGCCTAACATA-CAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684107 38 + 195804263 TGATCTCCCTCATAGCCAATGACAGGCCTAACATA-CAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721377 38 + 4876863 TGATCTCCCTCATAGCCAATGACAGGCCTAACATA-CAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605958 35 + 115148730 TGATCTCCCTCATAGCCAATGACAGGCCTAACATA---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888050 38 + 190429646 TGATCTCCCTCATAGCTAATGACAGGCCTAACATA-CAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835497 38 + 189454096 tgatctccctcatagctaatgacagacctaacata-caa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216675 38 - 25927173 TGATCTCCCTCATAGCTAATGACAGGCCTAACATA-CAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251056 38 + 4669795 TGATCTCCCTCATATCTAATGACAGGCCTAACATA-CAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208340 38 + 135778131 TGATCTCCCTCATAGCTAATGACAGGCCTAACATA-CAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638717 38 - 2847728 TGATCTCCCTCATAGCTAATGACAGGCCTAACATA-CAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770908 38 + 2368649 tgatctccctcatagctaatgacaggcctaaaata-caa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11157056 26 - 11315646 tggtc------------agtgaaaggcctgagata-gta i otoGar3.GL873580 C 0 I 171 s canFam3.chr16 16848832 9 - 59632846 ------------gaactagtg------------------ i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=186595.000000 s hg38.chr4_KI270789v1_alt 7365 58 + 205944 AT-ACAATGACAGGCCTAACATACAAATACTTGGCGTCTGGGTCCGAAGCATGAACttt s panTro5.chr4 192799074 58 + 194502333 AT-ACAATGACAGGCCTAACATACAAATACTTGGCGTCTGGGTCCGAAGCATGCACTCt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684145 58 + 195804263 AT-ACAATGACAGGCCTAACATACAAATACCTGGCGTCTGGGTCCGAAGCATGCACTCt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721415 58 + 4876863 AT-ACAATGACAGGCCTAACATACAAATACTTGGCGTCTGGGTCCGAAGCATGCACTCt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112605993 36 + 115148730 -----------------------GAAATACTTGGCATTTGGGTCCGAAGCATGCCCTCt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888088 33 + 190429646 AT--------------------------ACTTGGTGTCTGGGCCCGAAGCATGCAGTCt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835535 33 + 189454096 at--------------------------acttggtgtctgggcccgaagcatgcagtct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216713 33 - 25927173 AT--------------------------ACTTGGTGTCTGGGCCCGAAGCATGCAGTCt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251094 33 + 4669795 AT--------------------------ACTTGGTGTCTGGGCCCGAAGCATGCAGTCt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208378 59 + 135778131 ATAACAATGCCAGGCCTAACATACAAATACTTTGTGTCTGGGCCCGAAGCATGCACTCt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638755 57 - 2847728 AT-ACAATGACAGGCCTAACATACAAATACTTGGTGTCTGGGCCCGAAGCATGCACTC- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 770946 58 + 2368649 AT-ACAATGGCAGGCCTAACATACAAATACTTGGTGTCTGGGTCCGAAGCATGCACTCt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16848841 53 - 59632846 -----agtgctgggcctagtatacaaaca-tagttgtctggctccaaattctgcactct i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157082 171 - 11315646 I a score=10681.000000 s hg38.chr4_KI270789v1_alt 7423 2 + 205944 tt s panTro5.chr4 192799132 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684203 2 + 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721473 2 + 4876863 tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606029 2 + 115148730 tt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888121 2 + 190429646 tt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835568 2 + 189454096 tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216746 2 - 25927173 tt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251127 2 + 4669795 tt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208437 2 + 135778131 tt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638812 1 - 2847728 -t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771004 2 + 2368649 tt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16848894 0 - 59632846 C e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157082 171 - 11315646 I a score=901875.000000 s hg38.chr4_KI270789v1_alt 7425 180 + 205944 ---tttttttt--------------------------------------tttttttttttttttttttgagacgaagtcttgctctctcacccaggatggagtgcagtggcacgatctcagcttactgcaacctccacctcccaggttcaagcaattc-cctgccgcagcctcccaagtagctgggattacaggtgcccgccaccacacccggctaattttt s panTro5.chr4 192799134 175 + 194502333 ---tttttttt--------------------------------------tttttttttttttt-----gagacaaagtcttgctctgtcacccaggatggagtgcagtggcatgatctcagcttactgcaacctctgcctcccaggttcaagcaattc-cctgcctcagcctcccaagtagctgggattacaggtgcccgccaccacacctggctaattttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684205 161 + 195804263 ---tttttttt---------------------------------------------------------gagatgaagtcttgctctgtcacccaggatggagtgcagtggcacgatctcagcttactgcaacatccgcctcccaggttcaagcaattc-cctgccgcagcctcccaagtagctgggattacaggtgcccgccaccacacccggctaattttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721475 174 + 4876863 ---tttttttt--------------------------------------ttttttttttttt------gagacgaagtcttgctctgtcacccaggatggagtgcagtggcacgatctcagcttactgcaacctccgcctcccaggttcaagcaattc-cctgcctcagactcccaagtagctgggattacaggtgcccgccaccacacctggctaattttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606031 165 + 115148730 ---tttttttt--------------------------------------tttt---------------gagacgaagtcttgctctgtcgcccaggatggagtgccgtggcacgatctcagcttactacaacctccgcctcccaggttcaagcaattc-cctgcctcagcctcccgagtagctgggattacaggtgcccaccacccctcccggctaattttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888123 159 + 190429646 ---ttctttt----------------------------------------------------------gagacaaagtcttgctctgttgcccaggatggagtgcaatggcgccatcttggctcactgcaacctccgcctcccaggttcaaacaattc-cctgcctcagccttccaactagctgggattacaggtgcctgccacaaca-ctggctgattttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835570 159 + 189454096 ---ttctttt----------------------------------------------------------gagacaaagtcttgctctgttgcccaggatggagtgcaatggcgcgatcttggctcactgcaacctccgcctcccaggttcaaacaattc-cctgcctcagccttccaactagctgggattacaggtgcctgccacaaca-ctggctgattttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216748 159 - 25927173 ---ttctttt----------------------------------------------------------gagacaaagtcttgctctgttgcccaggatggagtgcaatggcgcgatcttggctcactgcaacctccgcctcccaggttcaaacaattc-cctgcctcagccttccaactagctgggattacaggtgcctgccacaaca-ctggctgattttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251129 159 + 4669795 ---ttctttt----------------------------------------------------------gaaacaaagtcttgctctgttgcccaggatggagtgcaatggcgcgatcttggctcactgcaacctccgcctcccaggttcaaacaattc-cctgcctcagccttccaactagctgggattacaggtgcctgccacaaca-ctggctgattttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208439 159 + 135778131 ---ttctttt----------------------------------------------------------gggacgaagtcttgctctgttgcccaggatggagtgcaatggcgcgatcttggctcactgcaacctccgcctcccaggttcaagcaattc-cctgcctcagccttccaactagctgggattacaggtgcctgccaccaca-ctggctgattttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638813 159 - 2847728 ---ttatttt----------------------------------------------------------gagacaaagtcttgctctgttgcccaggatggagtgcaatggcgcgatcttggctcactgcaacctccgcctcccaggttcaagcatttc-cctgcctcagccttccaactagctgggattacaggtgcctgccaccaca-ctggctgattttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771006 159 + 2368649 ---ttctttt----------------------------------------------------------gagacgaagtcttgctctgttgcccaggatggagtgcaatggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattc-cctgcctcagccttccaagtagctgggattacaggtgcctgccaccacg-ctggctaattttt i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11157253 214 - 11315646 TTTTTCCTTTTGAACCACTCTCTCCCATGGACATCTAAAACCTAAAACtttttttttttggta-----gggacagagtctcactttatgatcctcagtagagtgctatgac---atcacagctcacagcaacctccagctcttgggcttaggcaattctcttgcctcagcctcctgagtagctgggactataggtgcctgccacaatgcccacctatttttt i otoGar3.GL873580 I 171 I 2111 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16848894 0 - 59632846 C e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=712889.000000 s hg38.chr4_KI270789v1_alt 7605 125 + 205944 ggatttttagtagagacggggtttcaccacgttggccaggctggtcacgaactcctgacctaatgatccacctgcctcggcctcctaaagtgctgggattacaggcgtgagccaccgcacccggc s panTro5.chr4 192799309 125 + 194502333 ggatttttagtagagacgaggtttcaccacgttggccaggctggtcacgaactcctgacctcgtgatccacctgcctcggcctcctaatgtgctgggattacaggcgtgagccaccgcacccggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684366 125 + 195804263 ggatttttagtagagacggggtttcaccacgttggccaggctggtcacgaactcctgacctcgtgatccacctgccttggcctcctaaagtgctgggattacaggcgtgagccaccgcacccggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721649 125 + 4876863 caatttttagtagagacggggtttcaccacgttggccaggctggtcacgaactcctgacctcgtgatccacctgcctcggcctcctaaagtgctgggatgacaggcatgagccggcgcacccggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606196 125 + 115148730 ggatttttagtagagatggggtttcaccatgttggccaggctggtaacgaactcctgacctcgtgatccacctgcctcagcctcctaaagtgctgggattacaggtgtgagctgctgcacccggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888282 125 + 190429646 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaactcctgacctcatgatccacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacccggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835729 125 + 189454096 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaactcctgacctcatgatccacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacccggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24216907 125 - 25927173 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaactcctgacctcatgatccacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacccggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251288 125 + 4669795 ggatttttagtagagacgcggtgtcaccatgttggccaggctggttatgaactcctgacctcgtgatccacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacccggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208598 125 + 135778131 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaactcctgacctcatgatccacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacctggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2638972 125 - 2847728 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaagtcctgacctcatgatctacctgcctcaacctcccaaagtgctgggattacaggcatgagccactgcacccggc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771165 125 + 2368649 ggatttttagtagagacgcggtttcaccatgttggccaggctggttatgaactcctgacctcatgatccacctgcctcaacctcccaaagtgctgggattagaggcatgagccactgcacccggc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16848894 0 - 59632846 C e mm10.chr8 86481388 45 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=106126.000000 s hg38.chr4_KI270789v1_alt 7730 18 + 205944 -cTCAAAAACCTGCACTCT s panTro5.chr4 192799434 17 + 194502333 -cTCAAAG-CCTGCACTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684491 17 + 195804263 -cTCAAAG-CCTGCACTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721774 17 + 4876863 -cTCAAAG-CCTGCACTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606321 17 + 115148730 -cTCAAAG-CCTGCACTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888407 17 + 190429646 -cTCAAAG-CCTGCACTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835854 17 + 189454096 -ctcaaag-cctgcactct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217032 17 - 25927173 -cTCAAAG-CCTGCACTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251413 17 + 4669795 -cTCAAAG-CCTGCACTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208723 17 + 135778131 -cTCAAAG-CCTGCACTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2639097 17 - 2847728 -cTCAAAG-CCTGCACTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771290 17 + 2368649 -cTCAAAG-CCTGCACTCT i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86481433 18 - 129401213 CTCCAAAC-ACTACACACC i mm10.chr8 I 45 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16848894 0 - 59632846 C e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=140354.000000 s hg38.chr4_KI270789v1_alt 7748 22 + 205944 TAAGAAGCATTTTAGTCTAAGA s panTro5.chr4 192799451 22 + 194502333 TAAGAAGCATTTTAGTATAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684508 22 + 195804263 TAAGAAGCATTTTAGTCTAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721791 22 + 4876863 TAAGAAGCATTTTAGTCTAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606338 22 + 115148730 TAAGAAGCATTTTAGTCTAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888424 22 + 190429646 TAAGAAGCATTTTAGTCTAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835871 22 + 189454096 tAAGAAGCATTTTAGTCTAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217049 22 - 25927173 TAAGAAGCATTTTAGTCTAAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251430 22 + 4669795 TAAGAAGCATTTTAGTCTAAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208740 21 + 135778131 TAAGAAACATTTTAGTCTAA-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2639114 22 - 2847728 TAAGAAGCATTTTAGTCTAAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771307 21 + 2368649 TAAGAAGCATTTTAGTCTAA-G i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86481451 22 - 129401213 TATGAAGTACTTTAGTATAAGA i mm10.chr8 C 0 I 6327 s canFam3.chr16 16848894 22 - 59632846 tgatgagtactttataACAGGA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=712708.000000 s hg38.chr4_KI270789v1_alt 7770 136 + 205944 AAAGATTGACATATATAATTGCAGATTTACAAATAACTGCAATGCAGTAAATTACAGTTACTATAAGAGCATCCTTATGTCGGAGCTCAGTGGAATGCCTAGGGCTTGGTGT-GCCTTAGCT-------------------------TTTTAAGGAAAATTT s panTro5.chr4 192799473 136 + 194502333 AAAGATTGACATATATAATTGCAGATTTACAAATAACTGCAATGCAGTAAATTACAGTTACTATAAGAGCATCCTTATGTCGGAACTCACTGGAATGCCTAGGGCTTGGTGA-GCCTTAGCT-------------------------TTTTAAGGAAAATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684530 136 + 195804263 AAAGATTGACATATATAATTGCAGATTTACAAACAACTGCAATGCAGTAAATTACAGTTACTGTAAGAGCATCCTTATGTCGGAGCTCAGTGGAATGCCTAGGGCTTGGTGA-GCCTTAGCT-------------------------TCTTAAGGAAAATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721813 136 + 4876863 AAAGATTGGCATATATAATTGCAGATTTACAAACAACTGTAATGCAATAAATTATAGTTACTATAAGAGCATCCTTATGTCGGGACTCACTGGAATGCCTAGGGCTTGGTGA-GCCTTAGCT-------------------------TTTCAAGGAAAATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606360 136 + 115148730 AAAGATTGACATATATAATTGCAAATTTACAAATAAATGCAATGCAATAAATTACAGTTACTATAAGAGCATCCTTATATCGGAACCCACTGGAATGCCTAGGGCTTGGTAT-GCCTTAGCT-------------------------TTTTAAGGAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888446 155 + 190429646 AAAGATTGACAT-----ATTGCAAATTTGCAAATAACTGCAATTCAATATATTACAGTTACTATCAGAGCATCC-TATATCGGAGCCCGGTGGAATGCCTAGAGCTCGGTGT-GCTTTAGttttttcttttcttttcttttctttttttttAAGGAAAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187835893 155 + 189454096 AAAGATTGACAT-----ATTGCAAATTTGCAAATAACTGCAATTCAATATATTACAGTTACTATCAGAGCATCC-TATATCGGAGCCCGGTGGAATGCCTAGAGCTCGGTGT-GCTTTAGttttttcttttcttttcttttctttttttttAAGGAAAATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217071 145 - 25927173 AAAGATTGACAT-----ATTGCAAATTTGCAAATAACTGCAATTCAATATATTACAGTTACTATCAGAGCATCC-TATATCGGAGCCCGGTGGAATGCCTAGAGCTCGGTGT-GCTTTAGTT----------TTTTCTTTTCTTTTTTTTTAAGGAAAATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251452 155 + 4669795 AAAGATTGACGT-----ATTGCAAATTTGCAAATAACTGCAATTCAATATATTACAGTTACTATCAGAGCATCC-TATATCGGAGCCCGGTGGAATGCCTAGAGCTCGGTGT-GCTTTAGTTttttcttttcttttcttttcttttcttttAAGGAAAATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208761 153 + 135778131 AAAGATTGACATATTTAATTGCAAATTTGCAAATAACTGCAATTCAATAAATTGCAGTTACTATCAGAACATCC-TATATCTGAGCCTGGTGGAATGCCTAGGGCTCGGTGT-GCTTTAGttttttcttt-------ttttttttttttttAAGGAAAATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2639136 160 - 2847728 AAAGATTGACATATTTAATTGCAAATTTGCAAATAACTGCAATTCAATATATTACAGTTACTATCAGAGCATCT-TGTATCGGAGCCCGGTGGAATGCCTAGGGCTCGGTGT-GCTTTAGTTttttcttttcttttcttttctttttttttAAGGAAAATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771328 154 + 2368649 AAAGATTGACATATTTAATTGCAAATTTGCAAGTAACTGCAATTCAGTGAATTACAGTTACTATCAGAGCATCC-TATATCAGAGCCTGGTGGAATGCCTAGGGCTCGGTGT-GCCTTAGCtttttcttttctttt------tctttttttAAGGAAAATTC i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86487800 137 - 129401213 AAAAATCAGCACATATATTTTACAATATGCAAATAACTATGGTACAGGGAGTTCTAATTATCATAAGA-CAGTT-TATATGAAAGCTTAACATCAAACTATAGGCTTAGTATAGCTTTACCCTTTTCTTCCAG--------------CCTCA---------C i mm10.chr8 I 6327 C 0 s canFam3.chr16 16848916 129 - 59632846 AAAGATTAACACATATAATTGCAAATATGCAAATAGCTTCAATGTAAGGAGTGATAAACATTATAAGAAGTACC-TATATGGGAGCTCAGCAGAATGCCTAGGGCATGCTGT-GGCACAGAT-------------------------------TGAAAATCT i canFam3.chr16 C 0 I 3 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=281853.000000 s hg38.chr4_KI270789v1_alt 7906 49 + 205944 GTATTATTTTAATTATTTTTA-TGTACAGAAAACTCAACAGTGTACATTT s panTro5.chr4 192799609 49 + 194502333 GTATTATTTTAATTATTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684666 49 + 195804263 GTATTATTTTAATTATTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721949 49 + 4876863 GTATGATTTTAATTATTTTTA-TGTGCAGAAAACTCAACAGTGTACATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606496 49 + 115148730 ATATTATTTTAATTATTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888601 49 + 190429646 GTATTATTTTAATTACTTTTA-TGTACAGAAAACTGAACAGTGTACATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836048 49 + 189454096 GTATTATTTTAATTACTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217216 49 - 25927173 GTATTATTTTAATTACTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251607 49 + 4669795 GTATTATTTTAATTACTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208914 49 + 135778131 GTATTATTTTAATTACTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2639296 45 - 2847728 GTATTATTTTAA----TTTTA-TGTACAGAAAACTCAACAGTGTACATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771482 46 + 2368649 A---TATTTTAATTACTTTTA-TGTACAGAAAACTCAACAGTGTACATTT i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86487937 46 - 129401213 ATCTTATTATAATttttttcattgtattggatattta----tttacattt i mm10.chr8 C 0 I 63 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16849045 3 - 59632846 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=3747482.000000 s hg38.chr4_KI270789v1_alt 7955 673 + 205944 AACCAAGTTTAGTGGGAATTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAGGTCTTCCTGTAGACTAGACATCCCAGTCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTACGACACAGGGCAGGCAGAAAGGTAACCAGCTCGATGGGATCCACGTCGTGTG----CAATCACCACCAGCTGAGCTTTCATGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCGGCTGGAAGGACAGGTGGTCTCTTAGTGGGGACGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCC----AACAGCCTCTGCCCCTTCTCTTGCTTTGTCTTTAGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGGCAGTCCAGGGCCTGGGCGAACTGGTCAATCGCAGGAGGCACTTTCAGCCGCTTACAGAGGATGGCTCTCTGCCGCTGCAACCTGATATAGCAGGGCCGTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAAAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTCCTGCTTCTTCATGACCGCAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCTTCTTTCCTTTCGGCATCTTGAGCGGCGGAAAGAGAGAGACGC s panTro5.chr4 192799658 673 + 194502333 AACCAAGTTTAGTGGGAATTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAGATCTTCCTGTAGACTAGACATCCCAGCCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTACGACACAGGGCAGGCAGAAAGGTAACCAGCTCGATGGGATCCACGTCGTGTG----CAATCACCACCAGCTGAGCTTTCATGTTCTCCACCAAGGTGGTGACGGTATTAACTCCAGCTCGAAGGACAGGTGGTCTCTTAGTGGGGACGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCC----AACAGCCTCTGCCCCTTCTCTTGCTTTGTCTTTAGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGGCAGTCCAGGGCCTGGGTGAACTGGACAATCGCAGGAGGCACTTTCAGCCGCTTACAGAGGATGGCTCTCTGCCGCTGCAACCTGATATAGCAGGGCCGTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAGTGCCAAAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTCCTGCTTCTTCATGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCTTCTTTCCTTTCAGCATCTTGAGTGGCGGAAAGAGAGAGACAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192684715 673 + 195804263 AACCAAGTTTAGTGGGAATTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAGATCTTCCTGTAGACTAGACATCCCAGCCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTACGACACAGGGCAGGCAGAAAGGTAACCAGCTCGGTGGGATCCACGTCGTGTG----CAATCACCACCAGCTGAGCTTTCATGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCGGCTCGAAGGACAGGTGGTCTCTTAGTGGGGACGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCC----AACAGCCTCTGCCCCTTCTCTTGCTTTGTCTTTAGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGGCAGTCCAGGGCCTGGGTGAACTGGACAATCGCAGGAGGCACTTTCAGCCGCTTACAGAGGATGGCTCTCTGCCGCTGCAACCTGATATAGCAGGGCCGTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAAAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTCCTGCTTCTTCATGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCTTCTTTCCTTTCGGCATCTTGAGCGGCGGAAAGAGAGAGACGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3721998 673 + 4876863 AACCAAGTTTAGTGGGAATTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAGGTCTTCCTGTAGACTAGACATCCCACTCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTACGACACAGGGCAGGCAGAAAGGTAACCAGCTCGATGGGATCCACGTCGTGTG----CAATCACCACCAGCTGAGCTTTCATGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCGGCTCGAAGGACAGGTGGTCTCTTAGTGGGGACGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCC----AACAGCCTCTGCCCCTTCTCTTGCTTTGTCTTTAGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGGCAGTCCAGGGCCTGGGTGAACTGGTCAATTGCAGGAGGCACTTTCAGCCGCTTACAGAGGATGGCTCTCTGCCGCTGCAACCTGATATAGCAGGGCCGTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAAAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTCCTGCTTCTTCATGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCTTCTTTCCTTTCGGCATCTTGAGCGGCGGAAAGAGAGAGACGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112606545 671 + 115148730 AACCCAGTTTAGTGGGAATTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAGGTCTTCCTGTAGACTAGACGTCCCAATCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTACGGCACAGGACAGGCAGAAGGACAACCAGCTCGATGGGATCCATGTCGTGTG----CAGTCACCACCAGCTGAGCTTTCATATTCTCCACCAAGGTGGTGACGGTGTTAACTCCTGCTCGAAGGTCAGGTGGTCTCTCAGTGGGGACGTCCGCTTTGCTGGCAGCTTTCTTCTCAGCTGGGGCC----AACAGCCTCTGCTTCTTCTCTTGCTTTGTCTTTAGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGGCAGTCCAGGGCCTGGGTGAACTGGTTAATCGCAGGAGGCACTTCCAGTCGCTTACAGAGGATGGCTCTCTGCTGCTGCAACCTGTTATGGCGGGGCCATTTCACAGGGTGGGCGAGGTCCCTTTTGGGTTGGATGTCCTGTCCAATGCCGCAATTCTTAGGCCTTTTCTCAAAC--GGGATTCACCACTTTCTTGGCCTCCTGCTTCTTCATGACAGAAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCTTCTTTCCTTTTGGCATTTTGAGTGGCGGAAAGAGAGAGATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188888650 678 + 190429646 AATCCAGTTTAGTAGGAAGTTCTTTAGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCCTGTGGACTAGACATCCCAGTC-TGGCTTCCCATGGATAATGCAGTAAGGGACCCCCATTTTATGACACAGGGTAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCCATCAGTCACCACCAGCTGAGCTTTCACGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCTCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCCGACAGACAGCCTCTGCTTCTTCTCTTGCTTTG-CTTTAGTCTGTACTTGTGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAACTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGACTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAACATTCTTAGGCCATTTCTGAAACGGGGGATTCACCACTTTCTTGGCCTCCTGTTTCTTTGTGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTAGACTTCCTTCCTTTCGGCATCTTGAACGGCGGAAAGAGAGAGACGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836097 678 + 189454096 AATCCAGTTTAGTAGGAAGTTCTTTAGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCCTGTGGACTAGACGTCCCAGTC-TGGCTTCCCATGGATAATGCAGTAAGGGACCCCCATTTTATGACACAGGGTAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCCATCAGTCACCACCAGCTGAGCTTTCACGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCTGACAGACAGCCTCTGCTTCTTCTCTTGCTTTG-CTTTAGTCTGTATTTGTGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAACTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGACTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAACATTCTTAGGCCATTTCTGAAACGGGGGATTCACCACTTTCTTGGCCTCCTATTTCTTTGTGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTAGACTTCCTTCCTTTCGGCATCTTGAACGGCGGAAAGAGAGAGACGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217265 677 - 25927173 AATCCAGTTTAGTAGGAAGTTCTTTAGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCCTGTGGACTAGACGTCCCAGTC-TGGCTTCCCATGGATAATGCAGTAAGGGACTCCCATTTTATGACACAGGGTAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCCATCAGTCACCACCAGCTGAGCTTTCACGTTCTCCACCAAGGTGGTGACGGTGTTAACTCCTGCTTGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCCGACAGACAGCCTCTGCTTCTTCTCTT-CTTTG-CTTTAGTCTGTACTTGTGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAACTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGACTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTCTTGGGTTGGATGTCCTGTCCAATGCCAACATTCTTAGGCCATTTCTGAAACGGGGGATTCACCACTTTCTTGGCCTCCTATTTCTTTGTGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTAGACTTCCTTCCTTTCGGCATCTTGAACGGTGGAAAGAGAGAGACGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3251656 678 + 4669795 AATCCAATTTAGTAGGAAGTTCTTTAGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCCTGTGGACTAGACGTCACAGTC-TGGCTTCCAATGGATAATGCAGTAAGGGACCCCCATTTTATGACACAGGGCAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCCATCAATCACCACCAGCTGAGCTTTCACATTCTCCACCAAGGTGGTGACGGTGTTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCCGACAGACAGCCTCTGCTTCTTCTCTTGCTTTG-CTTTAGTCTGTACTTGTGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAACTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGGCTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAACATTCTTAGGCCTTTTCTGAAGCGGGGGATTCACCACTTTCTTGGCCTCCTGTTTCTTTGCGACAGCAGGGGCCGGAGCCACCTTCCTCCCCTTAGACTTCCTTCCTTTCGGCATCTTGAACGGCGGAAAGAGAGAGACGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134208963 678 + 135778131 AATCCAGTTTAGTAGGAAGTTCTTTAGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCCTGTGGACTAGACGTCCCAGTC-TGACTTTCCATGGATAATGCAGTAAGGGACCCCCATTTTATGACACAGGGCAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCAATCAATCACCACCAGCTGAGCTTTCACGTTCTCCACCAAGGTGGTGATGGTGTTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTAGGGCCGACAGACAGCCTCTGCTTCTTCTGTTGCTTTA-CTTTAGTCTGTACCTGTGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAAGTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGGCTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAAAATTCTTAGGCCTTTTCTGAAACGGGGGATTCACCACTTTCTTGGCCTCCTGTTTCTTTGTGACAGCAGGGGCCGGAGCCACCTTCTTCCTCTTAGACTTCCTTCCTTTTGGCATCTTAAAGGGCGGAAAGAGAGAGACGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2639341 678 - 2847728 AATCCAGTTTAGTAGGAAGTTCTTTGGCCTTTG-CTTTTTGAGCTTTGGTGCTAGTCTTCTTGTGGACTAGACGTCCCAGTC-TGGCTTCCCATGGATAATGCAGTAAGGGACCCCCATTTTATGACACAGGGCAGGCAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGCCATCAGTCACCACCAGCTGAGCTTTCACGTTCTCCACCAAGGTGGTGACAGTGTTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTGGGGATGTCCCCTTTGCCGGCAGCTTTCTTCTCAGCTGGGGCCGACAGACAGCCTCTGCTTCTTCTCTTGCTTTG-CTTTAGTCTGTACTTGCGGGTCAGCTTAAGCAGCTGAGTGGCTGTTTGGTGGTTCAGTGCCTGGGTGAACTGGTTAATCGCAGGAGGCATTTTTAGTCGCTTACAGAGGATGGCTCTCTGCTGCTGCATCCTGATATAGCAGGGCCTTTTCACAAGGTGGGCGAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGCCAACATTCTTAGGCCTTTTCTGAAGCGGGGGATTCACCACTTTCTTGGCCTCTTGTTTCTTTGTGACTGCAGGTGCCGGAGCCACCTTCTTCCCCTTAGACTTCCTTCCTTTCGGCATCTTGAACGGCGGAAAGAGAGAGACGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 771528 676 + 2368649 AACCCAGCTTAGTAGGAAGTTCTTTAGCCTTTGCCTTTTTGAGCTTTGGTGCAAGTCTTCCTGTGGACTAGACGTCCCAGTCTTGCCTTCCCCTTGATAATGCAGTAAGGGACCCCCATTTTATGGCACAGGGCAGACAGAAAGACAACCAGCTCAATGGGATCCACGTCATGTGTAATCAGTCACCACCAGCTGAGCTTTCATGTTCTCCACCAAGGTGGTGACGGTATTAACTCCTGCTCGAAGGGCAGGTGGTCTCTTAGTTGGGACGTCCCCTTTGCCGGAAGCTTTCTTCTCAGCTGGGGCC----GACAGCCTCTGCTGCTTCTCTTGCTTTG-GTTTAGTCTGTACTTGTGGGTCAGCTTAAGCAGCTGAGTAGCTGTTTGGCGGTTCAGTGCCTGGGTGAACTGGTTAATCGCGGGAGGCATTTTCAGCCACTTACAGAGGATGGCTCTCTGCTGCTGCATCCTGATATAGCAGGGCTTTTTCACAAGGTGGGCAAGGTCTCTTTTGGGTTGGATGTCCTGTCCAATGGCAAAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTCCTGTTTCTTTGTGACAGCAGGAGCCGGAGCCACCTTCTTCCCCTTAGACTTCTTTCCTTTCGGCATCTTGAACGGCAGAAAGAGAGAGACGC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e canFam3.chr16 16849045 3 - 59632846 I e mm10.chr8 86487983 63 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=125135.000000 s hg38.chr4_KI270789v1_alt 8628 27 + 205944 CCTTTTTCTTTCTTT-CTAGACTCTCGC s panTro5.chr4 192800331 27 + 194502333 CCTTTTTCTTTCTTT-CTAGACTCTCGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685388 27 + 195804263 CCTTTTTCTTTCTTT-CTAGACTCTCGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722671 27 + 4876863 CCTTTTTCTTTCTTT-CTAGACTCTCGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607216 27 + 115148730 CCTTTTTCTTTCTTT-CTAGACTCTCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889328 23 + 190429646 CCTTTTTCTTTCTT-----GCCTCTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836775 23 + 189454096 CCTTTTTCTTTCTT-----GCCTCTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217942 23 - 25927173 CCTTTTTCTTTCTT-----GCCTCTCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252334 27 + 4669795 CCTTTTTCTTTCTTT-CTAGCCTCTCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209641 27 + 135778131 CCTTTTTCTTTCTTT-CTAGCCTTTCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640019 27 - 2847728 CCTTTTTCTTTCTTT-CTAGCCTCTCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772204 27 + 2368649 CCTTTTTCTTTCTTT-CTAGCCTCTCAC i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16849048 28 - 59632846 CCTTAACCTGCCTTTACTAGGCTCTCTC i canFam3.chr16 I 3 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86487983 63 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11157467 2111 - 11315646 I a score=19903.000000 s hg38.chr4_KI270789v1_alt 8655 6 + 205944 TCCCAT- s panTro5.chr4 192800358 6 + 194502333 TCCCAT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685415 6 + 195804263 TCTCAC- i panPan2.chr4 C 0 I 8 s gorGor5.CYUI01015356v1 3722698 6 + 4876863 TCCCAT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607243 6 + 115148730 TCCCAT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889351 6 + 190429646 TCCCAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836798 6 + 189454096 TCCCAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217965 6 - 25927173 TCCCAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252361 6 + 4669795 TCCCAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209668 5 + 135778131 T-CCAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640046 6 - 2847728 TCCCAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772231 6 + 2368649 TCCCAA- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11159578 6 - 11315646 TTCCAT- i otoGar3.GL873580 I 2111 C 0 s canFam3.chr16 16849076 6 - 59632846 -TGCAAT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86487983 63 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=73446.000000 s hg38.chr4_KI270789v1_alt 8661 13 + 205944 GGACTTTTGGTAG s panTro5.chr4 192800364 13 + 194502333 GGACTTTTGGTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722704 13 + 4876863 GGACTTTTGGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607249 13 + 115148730 GGACTTTTAGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889357 13 + 190429646 GGACTTTTGGTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836804 13 + 189454096 GGACTTTTGGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217971 13 - 25927173 GGACTTTTGGTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252367 13 + 4669795 GGACTTTTGGTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209673 13 + 135778131 GGACTTTTGGTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640052 13 - 2847728 GGACTTTTGGTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772237 13 + 2368649 GGACTTTTGGTAG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11159584 13 - 11315646 GGACTTCTGATAG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16849082 12 - 59632846 ATACTTTCTCTG- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86487983 63 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e panPan2.chr4 192685421 8 + 195804263 I a score=711387.000000 s hg38.chr4_KI270789v1_alt 8674 111 + 205944 GTGCACTAGATAGCACACACGGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCACACTCACGGCCTCTAAATGCTTGTCATGCAGTCTGCAAACAAGA---TGTTT s panTro5.chr4 192800377 111 + 194502333 GTTCACTAGACAGCACACACGGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCACACTCATGGCCTCTAAATGCTTGTCATGCAGTCTGCAAACAAGA---TGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685429 111 + 195804263 GTGCACTAGACAGCACACACGGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCACACTCATGGCCTCTAAATGCTTGTCATGCAGTCTGCAAACAAGA---TGTTT i panPan2.chr4 I 8 C 0 s gorGor5.CYUI01015356v1 3722717 111 + 4876863 GTGCACTAGATAGCACACACGGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGCTTGAAAGCACACTCATGGCCTCTAAATGCTTGTCATGCAGTCTGCAAACAAGA---TGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607262 111 + 115148730 GTGCACTCGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATttctgtctggttgagagcagactcatggcctctaaatgcttgtcatgcagtctacaaacaaga---ttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889370 111 + 190429646 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCAGACTCATGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACACGA---TTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836817 111 + 189454096 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCAGACTCATGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACACGA---TTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24217984 111 - 25927173 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCAGACTCATGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACACGA---TTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252380 111 + 4669795 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCAGACTCATGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACACGA---TTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209686 111 + 135778131 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAACAAGGCATTTCTGTCTGGTTGAAAGCAGACTCGTGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACACGA---TTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640065 111 - 2847728 GTGCACTAGATAGCACACACAGTTTTCCCTTGAAGCAAGGCATTTCTGTCTGGTTGAAAGCAGACTCATGGCTTCTAAATGCTTTTCATGCAGTCTGCAAACAGGA---TTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772250 111 + 2368649 GTGCACTAGATAGCACACACAGTTTTCCCTTGAACCAAGGCATttctgtctggttgaaagcagactcatggcctctaaatgcttttcatgcagtctgcaaacacga---ttttt i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11159597 108 - 11315646 ATGTGCGAGCTA----AACCAGTCTTCTCTGGATGCAAGGAA--TCTGTTGGATTGAAAGAAGACCCGTGATCTCTAGATTTTGCCCATGTTGTCTGCTAATATGAAGGCTAGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16849094 107 - 59632846 GCGTGGTAGTTA--ATGCATAGTCTCGCCTTGAAGGGTGGTATTTCTCTTTGTTTGAAAAAAGACTCTTGACCTCTAGAGGCCTGCGATGTAGTCTGCAAATAAAT---TGT-- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e mm10.chr8 86487983 63 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=157308.000000 s hg38.chr4_KI270789v1_alt 8785 18 + 205944 AAAGGAAGTTGAAAACTC s panTro5.chr4 192800488 18 + 194502333 AAAGGAAGTTGAAAACTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685540 18 + 195804263 AAAGGAAGTTGAAAACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722828 18 + 4876863 AAAGGAAGTTGAAAACTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607373 18 + 115148730 aaagaaagttgaaaactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889481 18 + 190429646 AAAGAAAGTTGAAAACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836928 18 + 189454096 AAAGAAAGTTGAAAACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218095 18 - 25927173 AAAGAAAGTTGAAAACTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252491 18 + 4669795 AAAGAAAGTTGAAAACTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209797 18 + 135778131 AAAGAAAGTTGAAAACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640176 18 - 2847728 AAAGAAAGTTGAAAACTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772361 18 + 2368649 aaagaaagttgaaaactc i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11159705 18 - 11315646 AAAGAAAGTTAAAAGCTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86488046 18 - 129401213 AGAGGAGGTTAAAAACTC i mm10.chr8 I 63 C 0 s canFam3.chr16 16849201 18 - 59632846 AAagaaacctgaaaactc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3866115 6034 + 3993831 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=737623.000000 s hg38.chr4_KI270789v1_alt 8803 89 + 205944 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagaggtccttctggctggaccaaacttattttcaggaa s panTro5.chr4 192800506 89 + 194502333 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagaggtccttctggctggaccagacttattttcaggaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685558 89 + 195804263 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagaggtccttctggctggaccagacttattttcaggaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722846 89 + 4876863 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagaggtccttctggctggaccaaacttattttcaggaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607391 89 + 115148730 atgtttctccttttggaagttcatccctctttctgcacaag-gtgaactactagaggtccttctggctggaccaaacttattttcaggaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889499 89 + 190429646 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagagttccttctggctggaccaaacttattttcaggaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187836946 89 + 189454096 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagagttccttctggctggaccaaacttattttcaggaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218113 89 - 25927173 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagagttccttctggctggaccaaacttactttcaggaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252509 89 + 4669795 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagagttccttctggctggaccaaacttattttcaggaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209815 89 + 135778131 ATGTTTCTCCTTGtggaagttcatccctctttctgcacaag-gtggactacaagaggtccttctggctggaccaaacttattttcaggaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640194 89 - 2847728 ATGTTTCTCCTTGtggaagttcatccctctttctgtacaag-gtggactacgagagttccttctggctggaccaaacttattttcaggaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772379 89 + 2368649 atgtttctccttgtggacgttcatccctctttctgcacaag-gtggactacaagaggtccttttggctggaccaaacttattttcaggaa i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3872149 89 + 3993831 ATGtttctcctagtggaagttcattcctatttctgcacaac-atgggctgtagaaagtcctgctggctggaccaaacccattttcagaaa i proCoq1.NW_012145301v1 I 6034 C 0 s otoGar3.GL873580 11159723 88 - 11315646 ATATTTTTctgagtagaagttcattcctatttctgcacaac-atgggctgcagggagttctgctggct-gaccaaacctattctcagaaa i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86488064 75 - 129401213 ATGTTTCTCTTGGCAGAATCGTATCTTCCTGTTTGCACAAGAACGAGCTACAGG-GTTTTTGCTAGCTG--------------TCACTAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16849219 86 - 59632846 atgtttctcctggtagaaacccatccctcttcccacacaagagtgagctgtagaaag---ttctggtcggaccaaaactattgtca-aaa i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17453023 2348 - 93316391 I e dasNov3.JH570353 1338951 375 - 2520184 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=329359.000000 s hg38.chr4_KI270789v1_alt 8892 39 + 205944 gcagctctgaatctgtagaaaagcttgaacattactagt s panTro5.chr4 192800595 39 + 194502333 gcagctctgaatctgtagaaaagcttgaacataactagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685647 39 + 195804263 gcagctctgaatctgtagaaaagcttgaacgttactagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722935 39 + 4876863 gcagctctgaatctgtagaaaagcttgaacattactagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607480 38 + 115148730 gcagctctgaatctgtagaaaa-cttgaacattactagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889588 39 + 190429646 gcagctctgaatctgtagaaaagcttgaacaTTATTAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837035 39 + 189454096 gcagctctgaatctgtagaaaagcttgaacaTTATTAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218202 39 - 25927173 gcagctctgaatctgtagaaaagcttgaacaTTATTAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252598 39 + 4669795 gcagctctgaatctgtagaaaagcttgaacaTTATTAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209904 39 + 135778131 gcagctctgaatctgtagaaaagcttgaacaTTATTAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640283 39 - 2847728 gcagctctgaatctgtagaaaagcttgaacaTTTTTAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772468 34 + 2368649 gcagctctgaatctgtcgaaaagcttaaac-----tagt i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3872238 33 + 3993831 gcagttct------gtggaaaagcttaaacattactagt i proCoq1.NW_012145301v1 C 0 I 5 s otoGar3.GL873580 11159811 39 - 11315646 gcagttctACACCCGTGGAGAAGCTGGAATATTGCTGGT i otoGar3.GL873580 C 0 I 5 s mm10.chr8 86488139 31 - 129401213 ACATACCTGA--------AAGAGCTGGAACATTGGTAGA i mm10.chr8 C 0 I 5 s canFam3.chr16 16849305 39 - 59632846 gcagtttcaaatctgtggaaaagctggaacatcactagt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1339326 39 - 2520184 GCAGGTCTGAATCTGCAGATGAACTTGGACCTTACAGGT i dasNov3.JH570353 I 375 I 2 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17453023 2348 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=4073974.000000 s hg38.chr4_KI270789v1_alt 8931 403 + 205944 tctcagagtgatgctgcataatacaagaagagGCTA-----CCTTCATT-TGA--TGTTCCTATGATTACTGTATGTCCGCCTCTACCGTGATACCGACTTGCTAAGG-------ATTGC-------TAACATTTAGGCATACTTGCATCGTAACAACTTAACAGTTTAACTTTGACTACAAAGGCCAGTGAAGGGATCGTCTACTATAA-TTTTCAATTACGTTGAAATGTTTCCACAATAACTATCTTTAAACACTTTATGTGTCTAGAAATGCAGGTTACTTGGTGAAATCTAATCTCGATGGAAAGCTTTGATGCTCTGTATCAAATGAAAAC----CAATT----TAAGCCATCTATGCTGCACATTAATATTAAGCAATTATATTAACTGAAAGCACTGTGAATACATGAATTGCTTTCATTAAAAAA s panTro5.chr4 192800634 404 + 194502333 tctcaaagtgatgctgcataatacaagaagagGCTA-----CCTTCATC-TGA--TGTTTCTATGATTACTGTAGGTCCACCTCTACCGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCGTAACAACTTA--AGTTTAACTTTGAC-ACAAAGGCCAGTGAAGGGATCGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCCAGAATAACTATCTTTAAACACTTTATGTGTCTAGAAATGCAGGTTACTTGGTGAAATCTAATCTCAATGGAAAGCTTTGATGCTCTGTATCAAATGAAAAC----TAATTTAACTAAGCCATCTATGCTGCACATTAATATTAAGCAATTATATTAACTAAAAGCACTGTGAATACATGAATTGCTTTCATTAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192685686 403 + 195804263 tctcagagtgatgctgcataatacaagaagagGCTA-----CCTTCATT-TGA--TGTTTCTATGATTACTGTATGTCCACCTCTACCGTGATACCGACTTATTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCGTAACAACTTAACAGTTTAACTTTGACTACAAACGCCAGTGAAGGGATCGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCCACAATAACTATCTTTAAAGACTTTATGTGTCTAGAAATGCAGGTTACTTGGTGAAATCTAATCTCGATGGAAAGCTTTGATGCTCTGTATCAAATGAAAAC----TAATT----TAAGCCATCTATGCTGCACATTAATATTAAGCAATTATATTAACTAAAAGCACTGTGAATACATGAATTGCTTTCATTAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3722974 407 + 4876863 tctcagagtgatgctgcataatacaagaagagGCTA-----CCTTCATT-TGA--TGTTTCTATGATTACTGTATGTCCACCTCTACCGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCGTAACAACTTAACAGTTTAACTTTGACTACAAAGGCCAGTGAGGGGATCGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCCACAATAACTATCTTTAAACACTTTATGTGTCTAGAAATGCAGGTTACTTGGTGAAATCTAATCTCAATGGAAAGCTTTGATGCTCTGTATCAAATGAAAAC----TAATTTAACTAAGCCATCTATGCTGCACATTAATATTAAGCAATTATATTAACTAAAAGCACTGTGAATACATGAATTGCTTTCATTAAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607518 398 + 115148730 t-------tgGTGCTGCATAATACAAGAAGAGGCTA-----CCTTCCTT-TGA--TGTTTCTATGATTACTGTATGTCCACCTCTACCGTGATACCGACTTACTAGGG-------ATTAC-------TAACATTTAGGCATACTTGCGTCGTAACAACTTAACAGTTTAACTTTGACTACAAAGGCCAATGAACGGATCGTCAACTATAA-TTTTCAATTATGTTGAAATGTTTCCACAATAACTATCTTTAAACACTT--TGTGTCTAGAAATGCAGGTTACTTGGTGAAATCTAACCTCAATGGAAAGCTTTGATGCTCTGTATCAAATGAAAAC----TAATTTAACTAAGCCATCTATGCTGCACATTAATATTAAGCAATTATATTAACTAAAATCACTGTGAATACATGAATTGCTTTCATTAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188889627 409 + 190429646 TCTCAAAGCGATGCTGCATAATACAAGAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCTACCTCTACAGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACGATAACTATCCTTAAACACTT--TGTGTCTAGAGATGCAGGTTACTTGGTGAAATCGAATCTCAACGGAAAGCTTTGATTCTCTGTATCAAGTGAAAACAAATTAATTTAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCATTCATTAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837074 407 + 189454096 TCTCAAAGCGATGCTGCATAATACAAGAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCCACCTCTACAGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAATAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCGAATCTCAACGGAAAGCTTTGATTCTCTGTATCAAGTGAAAAC----TAATTTAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCATTCATTAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218241 407 - 25927173 TCTCAAAGCGATGCTGCATGATACAAGAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCCACCTCTACAGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAATAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCGAATCTCAACGGAAAGCTTTGATTCTCTGTATCAAGTGAAAAC----TAATTTAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCATTCATTAAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3252637 407 + 4669795 TCTCAAAGCGATGCTGCATAATACAAGAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCCACCTCTACAGTGATACCGACTTACTAGGG-------ACTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAATAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCTAATCTCAATGGAAAGCTTTGATTCTCTGTATCAAGTGAAAAC----TAATTCAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCGTTCATTAAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134209943 407 + 135778131 TCTCAAAGTGATGCTGCATAATACAAAAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCCACCTCTACGGTGATACCGACTTCCTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCTTGACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAATAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCTAATCTCAACGGAAAGCTTTGATTCTCTGTATCAAGTGAAAAC----TAATTTAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCTTTCATTAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640322 407 - 2847728 TCTCAAAGCGATGCTGCATAATACAAGAAGAGGCTA-----CCTTCATT-TGA--TGTTTCTGTGATTACTGTATGTCCACCTCTACAGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGTTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAATAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCTAATCTCAATGGAAAGTTTTGATTCTCTGTATCAAGTGAAAAC----TAATTTAACTAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCTTTCATTAAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772502 408 + 2368649 tctcAAAGTGATGCTGCATCATACAAGAAGAGGCTACTTAGCCTTCATT-TGA--TGTTTCTGTGATTACTGCATGTCCACCTCTACAGTGATACCGACTTACTAGGG-------ATTGC-------TAACATTTAGGCATACTTGCATCATAACAACTTAACAGCTTAACTTTGACTACAAAGACCAATGAAGGGATTGTCTACTATAA-TTTTCAATTATGTTGAAATGTTTCTACAGTAACTATCCTTAAACACTTTATGTGTCTAGAGATGCAGGTTACTTGGTGAAATCTAATCTCAACAGAAAGCTTTGATTCTCTGTATCAAGTGAAAAC----TAATT----TAAGCCATCTCTGCTGCACATTAATATTAAGCAATTATATTAACTCAAAGCACTGTGAATACATTAATTGCTTTCATTAAAAAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17455371 414 - 93316391 tctcaaagtaattctgcataaaacaagaagagatTG-----CCTTCATT-TGAA-TGTTTCTGTGGTTACTGTATGTCTACCTCTAAAGTGATGCCAAATTACTATGGGTTCTACATTGC-------TAAAATTTAGGCAGACTTACATCACAATGACTCAACAGTTTAACTTTGACTACAAAGTCCAATGAGGTGATTGCCTACTATAATTTTTCAATTTTGTTGAAATGTTTCTCCAATCACCATCCTTAAACACTTTGTGTGTCCAGAAATACAGGTTATCTGATGAAATTTAATCTCACTGGAAATCTTTGATGATCTATATCAAATTAAAAC----TAATTTAACCAAACTATCTATGCTGCACATTAATATTAGGCAATTACATTAAATAGAAGCGCTGTGA--ATGTTAATTGTTTTCATTAAAAAA i micMur3.chr14 I 2348 I 1 s proCoq1.NW_012145301v1 3872276 416 + 3993831 tctcaaagtaattctgcataaaacaagaagagatTA-----CCTTCATT-CGAA-TGTTTCCATAGTTATTGTATGTCTACATCTAAAGTGATACCAACTTACTGTGGGTTCTATATTGC-------TAAAATTTAGGCAGACTTGCATCACAATGACTCAACAGTTTACATTTGACTACAAAGTCCAATGAAGGGATTGCCTATTATAATTTTTCAATTATGTTAAAATGTTTCTTCAATCACTATCCTTAAACACTTTGTGTGTCTAGAAATACAGGTTATCTGATGAAATTTAATTTCACTGGAAATCTTTGATGATCTATATCAAATTAAAAT----TAATTTAACCAAACTATCTATGCTGCAAATTAATATTAGGCAATTACATTAAATAGAAGCACTGTGAATATGTTAATTGTTTTCATTAAAAGA i proCoq1.NW_012145301v1 I 5 I 1 s otoGar3.GL873580 11159855 408 - 11315646 TCTGAAAGTAATGCTGCATAAATCAGGAAGATATTC-----CCTTCATC-TGAG-CGTTTCTATGGTTACAGTCTGTCTGTCTCCTCAGTGATGCTGACTTCGTCTGAGTGCTGTACTCT-------CAAAGTTTAGGCAGACTTGCATCACAGTGACTCAACAGTTTGACTTTGACTGCAAAGGCCAATGGTGGGATTTCCTATTAGAATTTTTCAATTATGTTGAAATGTTTCTCTAATCACTGTCCTTAAACACTATGTATGTCTAGAAATACAGGTTATTTGGTGAAACTTAATCTTATTGGAACTCTTCAATGATCTATACCAAATTAAAAC----CAATT-------ATCATCTGTGCTACAAATTAATATTAAGCAATCACATTAAATAGAAGCACTGTGAATATGTTAATCATTTTCATAAAAAC- i otoGar3.GL873580 I 5 I 343 s mm10.chr8 86488175 408 - 129401213 TTTTAAAGCAGTGCT--ATGTTAGAAAGGGGTGTGA-----CCTTCACTGCCA--TGTTTCCTTGATGACTATATGTCTGCCCCAGCA-TGATCCTAGGTAACACTAG-------ATCACATGCATTTAAAATTTAGGCATAGTTATACCATAAAGATTCAGTGATTTAACTTTGATTACAAAGGCTAGTGAGGGGATCTTCCAGTATAA-ATTTCAATTATGTTGAAATGCTTCTGCAACCTCTATCCTTAAATACCCTATGCCTCTGGAAATACAGGTAATTTAACTAAATCTAATTTCAATAGAAAGCTTTGATGCTCTATATCAAATGAAACC----TAACT----TAAACCGTTGATGCTGTGCATTACTATTAAGCAATTATATTAAATAGAAGTGCTGTGAATATGTTAATTGCTTTCATTAAAAAC i mm10.chr8 I 5 C 0 s canFam3.chr16 16849344 339 - 59632846 -------------------------------tgaca-----tcccaaag-tGA--GGCTGTAGTGAGTCCTGT------------------------------------------ATTGC-------TAAAAATTTGTCAGACTAGCATCATAATGGCTTTA-ACTTTAACTTTGACTACAAAGGACAATGAGGGGATCTTCTAATATAA-TTTTCAATTATATTGAATTGTTTTACCAATCACTATCC-TAAACACTTTATGTGTCTGGAAATACAGGTTATTTGGTGAAATCTAATCTCCCTGGAAAGCTTTGATGCTCTATGCCAAATTAAAAC----TAATTTAACTGAACCATCTATGCTGCACATTAATATTAAGCAATTACATTAAATGGATGCACTGTGAATATGCTAATTGCTTTCATTAAAAAC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1339367 411 - 2520184 CTTCGCGGGGAGGCTGCATAAAGCAAGGAGAGG--A-----CCTTCATT-TGAACTTTTTTAATGGTCATTGTATGTGTACCTCCTCAGTGGTGCCAACTTACGATGGATCCTGAAATGC-------TAAAATGTAGCGAGAGGTGCATCACAGTGACTCAAGAGCTTACCTTTGACTACAAGAGGCAACGAGAGCATCTTCTAACACAA-TTGTCAATTCTATTGGACTGTGTTGCCAGGCACAATTCTTAAACACCTTATGCATCTAGAAAGACAGGTAATTTGGTGAAATCTAATCTCACTGGAAAGCTTTG---CTCTCTACCAAATTAAAAC----TAATTTAACTAAGCCATCTATGCCGCATATTAATATTAAGCAATTACATTAAATGGAGGCACGGTGAATATGTTAATTGCTTTTGTTAAAAAA i dasNov3.JH570353 I 2 I 1 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=2131059.000000 s hg38.chr4_KI270789v1_alt 9334 208 + 205944 AGA-TTTCC-TTAATTACCTTCTAAGCAAATATTCTCCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGAGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTATA---AGGCTATTTTTATTTGGATACTGTTAT- s panTro5.chr4 192801038 207 + 194502333 A-A-TTTCC-TTAATTACCTTCTAAGCAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGAGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAGTATAATTTTATA---AGGCTATTTTGATTTGGATACTGTTAT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686089 208 + 195804263 AGA-TTTCC-TTAATTACCTTCTAAGCAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGAGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAGTATAATTTTATA---AGGCTATTTTGATTTGGGTACTGTTAT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723381 208 + 4876863 AGA-TTTCC-TTAATTACCTTCTAAGCAAATATTTTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGAGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTCATA---AGGCTATTTTGATTTGGATACTGTTAT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112607916 208 + 115148730 AGA-TTTCC-TTAATTACCTTCTAAGCAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGAGATGTCAA-TTTACATGAAGTACATATGTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTATA---AGGCTATTTTGATTTGGATACTGTTAT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890036 203 + 190429646 TGA-TTTCC-TTAATTACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAGTGTTTGCAA----------------------------------------------TACTC-----AAATAGGCAATGGGGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837481 203 + 189454096 TGA-TTTCC-TTAATTACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTC-----AAATAGGCAATGGGGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218648 203 - 25927173 TGA-TTTCC-TTAATTACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTC-----AAATAGGCAATGGGGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253044 203 + 4669795 TGA-TTTCC-TTAATTACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAATATTTGCAA----------------------------------------------TACTC-----AAATAGGCAATGGGGATGTCAA-TTTACATGAAATACGTATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210350 208 + 135778131 TGA-TTTCC-TTAATAACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAAACAATGGGGATGTCAA-TTTACATGAAATACATGTTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATATAATTTGAGA---AGGCCATTTTGATTTGGATACCGTTAC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640729 208 - 2847728 TGA-TTTCC-TTAATTACCTTCTAAGTAAATATTCTTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGCAATGGGGATGTTAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAACCCAGAATTAAATATAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 772910 208 + 2368649 TGA-TTTCC-TTAATTACCTTCTAAGCAAATATTCGTCACTAAACTTTTTAAGTATTTGCAA----------------------------------------------TACTCAAATAAAATAGGTAATGGGGATGTCAA-TTTACATGAAATACATATTTCT-AAAAATCTAACTTGCATTGCAAGTTTAAAATATGTTTACAAAATCCAGAATTAAATACAATTTTAGA---AGGCTATTTTGATTTGGATACTGTTAT- i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17455786 206 - 93316391 TGATTTTTC-TTAATTACTTTCTAAGCAAATATTCTTTACTAAACTATTTAAATA----CAA----------------------------------------------TACTTAAATCCAATAGGTAATGAGGATGTCCA-TTTATACTAAATGCATATTTTTTAAAACTCTAACTTGTTTTGCAAGTTTAAAATATGTTTACAAAATCCAAAACTGAATATGATTTTAGA---AGACTATTTAGATTTGAATAATGTTAT- i micMur3.chr14 I 1 I 217 s proCoq1.NW_012145301v1 3872693 206 + 3993831 TGA-TTTCC-TTAATTATTTTCTAAGCAAATATTCTTTACTAAACTTTTTAAATT----CAA----------------------------------------------TACTTAAATCCAATAGGTAATGAGGATGTCCATTTTACATTAAATGCATATTTTTTAAAAATCTAACTTGTTTTGCAAGTTTAAAATATGTCTAGAAAATCCAGAACTGAATATGATTTTAGA---AGGCTATTTGGATTTGAATAATGTTAT- i proCoq1.NW_012145301v1 I 1 I 4 s otoGar3.GL873580 11160606 251 - 11315646 TGA-TTTCT-TGAATTACTTTCTAAGCAAATATTCTTTACTAAACTAAGTATATA----CAATTTTTTTTATTAAATCATACCTGTTTACACTAATGCAATCATGCAGTATTCAAATCCAATAGGTAATGAGGATGTCAA-TTTACCCTGAATACACATTTTTAAAAAATCTGACTTACATTGCACGTTTAAAATGTATTTACAAAATCCAGGACTGAGTATGATTTTAGA---AGACTGTTTTGATTTGAATGGTGTTAC- i otoGar3.GL873580 I 343 I 6 s mm10.chr8 86488583 205 - 129401213 TGA-TTTCC-TTAATTACTTTCTAAGCAAATATTCTTTACTAAACTA-TTAAGTATTTGCAA----------------------------------------------TATTTAAATTCAATCTCTTATGGGGATGTCAA-TTTATGTTAAATACTTATTTCTTAAAAATCTGTTTT---TCTCCTGGTTTAAATATATTTAAAAATCCCTAAACTGGATACAACATTAGA---AAACTAATCTGATTTCAACAATGCCCT- i mm10.chr8 C 0 I 11 s canFam3.chr16 16849684 204 - 59632846 TGA-TTTCC-TTAATTACTTTCTAAGCAAATATTCTTTACCAAGCTATTTAAGTATTTGCAA----------------------------------------------CACTCAAATTCAATAGGTGATGGGGATGTCaa-tttatattaaatacatattttt-taaaatGTATTTTGCATTGCAAGTTTAAAATGTATTT----AATCCAGAACTGAATATGATTTTGGA---ACACTATTTTCATTTGAATAATGTTAT- i canFam3.chr16 I 1 I 4 s dasNov3.JH570353 1339779 212 - 2520184 GGA-TTTCCTTTAATTACTTTCTAAGCAAATATTCTCTACAAAACTGTTTAAGGATTTGCAA----------------------------------------------TACTCAAATTCAATAGGTGATGT-GATGTCAA-TTTCTATTAAATACTTATTTTT-AAAAATCGATTTTGTGTTTCAAGTTTAACGTATGTTTACAAAATCCAGAACTGAAGATGACTCTAGAATTAGAGTCCTGTGATCTGAGTCATATAAAT i dasNov3.JH570353 I 1 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=240774.000000 s hg38.chr4_KI270789v1_alt 9542 34 + 205944 GTTATTCGGAG-------AAAACAGTATTTCTTGTTTTTCA s panTro5.chr4 192801245 34 + 194502333 GTTATTGGGAG-------AAAACAGTATTTCTTGTTTTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686297 34 + 195804263 GTTATTGGGAG-------AAAACAGTATTTCTTGTTTTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723589 34 + 4876863 GTTATTGGGAG-------AAAACAGTATTTCTTGTTTTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608124 34 + 115148730 GTTATTGGGAG-------AAAACAGTATTTCTTGGTTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890239 33 + 190429646 GTTATTGGGTG--------AAACAGTATTTCTTGGTTTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837684 33 + 189454096 GTTATTGGGTG--------AAACAGTATTTCTTGGTTTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218851 33 - 25927173 GTTATTGGGTG--------AAACAGTATTTCTTGGTTTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253247 33 + 4669795 GTTATTGGGTG--------AAACAGTATTTCTTGGTTTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210558 33 + 135778131 GTTATTGGGTG--------AAATAGTATTTCTTGATTTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640937 33 - 2847728 GTTATTGGGTG--------AAACAGTATTTCTTGGTTTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773118 33 + 2368649 GTTACTGGGTG--------AAACAGTATTTCTTGGTTTTCA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3872903 34 + 3993831 TTTATTAGGTG-------AAAACCGTATCTCTTATTTATCA i proCoq1.NW_012145301v1 I 4 C 0 s otoGar3.GL873580 11160863 34 - 11315646 TTTTTTAGGTG-------AAAACTGTATCTCTTATTTTTTG i otoGar3.GL873580 I 6 C 0 s mm10.chr8 86488799 41 - 129401213 CTTATTTTAAGGCTTTTGAAGACATCGTTTTTTATCTTTCA i mm10.chr8 I 11 I 5599 s canFam3.chr16 16849892 34 - 59632846 CTTATTGGGTC-------AAAATAATAACTCTCATTTTTAA i canFam3.chr16 I 4 C 0 s dasNov3.JH570353 1339991 34 - 2520184 TTTGCTGAGTG-------AAGACAGACTCTCTCGGTGCGCA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17455992 217 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=155769.000000 s hg38.chr4_KI270789v1_alt 9576 21 + 205944 TCCTTTACTAGCTCAAGGCTT s panTro5.chr4 192801279 21 + 194502333 TTCTTTACTAGCTCAAGGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686331 21 + 195804263 TTCTTTACTAGCTCAAGGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723623 21 + 4876863 TCCTTTACTAGCCCAAGTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608158 21 + 115148730 TCCTTTACTAGTCCAGGGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890272 21 + 190429646 TCCTTTACTTGCCTAAGGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837717 21 + 189454096 TCCTTTACTTGCCTAAGGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218884 21 - 25927173 TCCTTTACTTGCCTAAGGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253280 21 + 4669795 TCCTTTACTTGCCTAAGGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210591 21 + 135778131 TCCTTTACTTGCCTAAGGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640970 21 - 2847728 TCCTTTACTTGCCTAAGGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773151 21 + 2368649 TCCTTTACTTGCCTAAGGCTT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3872937 21 + 3993831 TCCTTTATTAGCCCAAGGCTT i proCoq1.NW_012145301v1 C 0 I 160 s otoGar3.GL873580 11160897 21 - 11315646 TTCTTTATTAGCTCAAGGTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16849926 20 - 59632846 TCCTTTAATA-CCTAAGGCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1340025 19 - 2520184 TCCTCTGGC-GCCCCAGGCT- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17455992 217 - 93316391 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=1266851.000000 s hg38.chr4_KI270789v1_alt 9597 205 + 205944 GTCAGGATGCCACTCATATCATATTGTGATGTTATGATGTATGCCCATACCACTTTCTG--TCTCAAGGAAAAGGTCTGTCTCCTCTT---------ATCCACATTGGCCGCTGTGCCCATCTCTCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTGAGGAGGTACATGGG-TTTTTTGTGACCGCAAGC-- s panTro5.chr4 192801300 205 + 194502333 GTCAGGATGCCACTCATATCGTATTGTGATGTTATGATGTATGCCCATACCACTTTCTG--TCTCAAGGAAAAGGTCTGTCTCCTCTT---------ATCCACATTGGCCGCTGTGCCCATCTCTCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTGAGGAGGTACATGGG-TTTTTTGTGACCGCAAGC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686352 205 + 195804263 GTCAGGATGCCACTCATATCGTATTGTGATGTTATGATGTATGCCCATACCACTTTCTG--TCTCAAGGAAAAGGTCTGTCTCCTCTT---------ATCCACATTGGCCGCTGTGCCCATCTCTCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTGAGGAGGTACATGGG-TTTTTTGTGACCGCAAGC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723644 205 + 4876863 CTCAGGATACCACTCATATCATATTGTGGTGTTATGATGTATGCCCATACCACTTTCTG--TCTCAAGGAAAAGGTCTGTCTCCTCTT---------ATCCACATTGGCCGCTGTGCCCATCTCTCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTGAGGAGGTACACGGG-TTTTTTGTGACCGCAAGC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608179 206 + 115148730 CTCAGGATACCACTCATATCATATTGTGATGTTATGATATATGCCCATACCACTTTCTG--TCTCAAGGAAAAGGTCTCTCTCCTCTT---------ATCCACATTGGCTGCTGTGCCCATCTCCCTGGTCTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTGAGGAGGTACATGGGTTTTTTTGTGACCACAAGC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890293 207 + 190429646 CTCAGGATACCACTCATATCATATTGTGGTATTATGGTATATGTCCATACCACTTTCTGTCTCTCAAGGAAAAGATATCTCTCCTCTT---------ATCCACACTGACCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAGAGGCTTAGGAGGTACATGGG-TTTTTCATGACCTCAAGC-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837738 207 + 189454096 CTCAGGATACCACTCATATCATATTGTGATATTATGGTATATGTCCATACCACTTTCTGTCTCTCAAGGAAAAGATATCTCTCCTCTT---------ATCCACACTGACCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAGAGGCTTAGGAGGTACATGGG-TTTTTCATGACCTCAAGC-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24218905 207 - 25927173 CTCAGGATACCACTCATATCATATTGTGATATTATGGTATATGTCCATACCACTTTCTGTCTCTCAAGGAAAAGATATCTCTCCTCTT---------ATCCACACTGACCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAGAGGCTTAGGAGGTACATGGG-TTTTTCATGACCTCAAGC-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253301 207 + 4669795 CTCAGGATACCACTCATATCATATTGTGATATTATGGCATATGTCCATACCACTTTCTGTCTCTCAAGGAAAAGGTCTCTCTCCTCTT---------ATCCACACTGGCCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAGAGGCTTAGGAGGTACATGGG-TTTTTCATGACCTCAAGC-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210612 207 + 135778131 CTCAGGATACCACTCATATCATAATGTGATATTATGGTATATGTCCATACCACTTTCTGTCTCTCAAGGAAAAGGTCTCTCTCCTCTT---------ATCCACACTGGCCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCTCCTCATGTTCACAGAGAAGAAAGGCTTAGGAGGTACATGAG-TTTTTCATGACCTCAAGC-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2640991 207 - 2847728 CTCAGGATACCACTCATATCATATTGTGATATTATGGTATATATCCATACCACTTTCTGTCTCTCAAGGAAAAGGTCTGTCTCCTCTT---------ATCCACACTGGCCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAGAGGCTTAGGAGGTACATGGG-TTTTTCATGACCTCAAGC-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773172 207 + 2368649 CTCAAGATACCACTCACACCATATTGTGATATTATGGTATATGTCCATACCACTTTCTGTCTCTCAAGGAAAACGTCTCTCTCCTCTT---------ATCCACACTGGCCGCTGTGCATATCTCCCTGGTTTCCATCTTGCT-G-GCACTAAGGTAGCCCCTCATGTTCACAGAGAAGAAAGGCTTAGGAGGTACATGGG-TTTTTCGTGACCTTAAGC-- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11160918 169 - 11315646 CTGAGG----------------------------------------ATACCACTTTCTATCTTTCAAAGAAAAGGTCTCCCTCATCTC---------ATCAGTGGTGACTACTCTGCAGGTCTCTGTGGTTTCATTCCTGCT-GAGCACTAAGATAGCCCTTCAAGTTCATGGAGAAGGAAGCCTTTGGGGTTATGTAGGTTTTTTCATTACCTCCAGT-- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16849946 175 - 59632846 CTGAGGACAC---------------------------------------CCACTTTATC--TCTCAGAGAAAAGGTCTCTCTCTCTTTGGTCTCATGATTGATGTTGACTCATGTTCGAACCTCCATTGTTTCAACCTTGCTCA-GCACTAAG-TAGCCCTTCAGGTTCGTAGAGAGGGAAGGTTTTGGAGATTTATAGA-TTTCTCATTACCTCCACA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1340044 144 - 2520184 -TCTGAATGCACCTTGCCC------------------------TCCCTCCCGCTCTCTT-------------------------TGGC---------ACCAGTGTCGACCGCTCTACAGGTCGCCGTGGCTCCAGGCTGGCT-G--------AGTGGC------AGTGCACAGAG-GGGGAGTCTTA-GAGACCTGTGGG-TCTTTCATTATCGCCACAGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3872958 160 + 3993831 I e micMur3.chr14 17455992 217 - 93316391 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=24752.000000 s hg38.chr4_KI270789v1_alt 9802 2 + 205944 TT s panTro5.chr4 192801505 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686557 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723849 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608385 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890500 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837945 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24219112 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253508 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210819 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2641198 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773379 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17456209 2 - 93316391 TT i micMur3.chr14 I 217 C 0 s proCoq1.NW_012145301v1 3873118 2 + 3993831 TT i proCoq1.NW_012145301v1 I 160 C 0 s otoGar3.GL873580 11161087 2 - 11315646 TT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16850121 2 - 59632846 TT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1340188 2 - 2520184 TT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=628023.000000 s hg38.chr4_KI270789v1_alt 9804 78 + 205944 TTCAGTGCTTGTGTGACTCTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTAGGACTTCA-GGGATTCATGGAATAT s panTro5.chr4 192801507 79 + 194502333 TTCAGCGCTTGTGTGACTCTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTAGGACTTCAGGGGATTCATGGAATAT i panTro5.chr4 C 0 I 431 s panPan2.chr4 192686559 79 + 195804263 TTCAGTGCTTGTGTGACTCTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTAGGACTTCAGGGGATTCATGGAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723851 79 + 4876863 TTCAGTGCTTGTGTGACTCTAACTTCTGAGAAATTTCTTGATTTTCCTCAAGTGGGACTTCAGGGGATTCATGGAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608387 79 + 115148730 TTCAGTGCTTGTGTGACTCTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGGGACTTCAAGGGATTTATGGAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890502 77 + 190429646 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187837947 77 + 189454096 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTGGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24219114 77 - 25927173 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253510 77 + 4669795 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210821 77 + 135778131 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTCGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2641200 77 - 2847728 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGAGACTTAAGGGAATTCATGGAATAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773381 77 + 2368649 TTCAGTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTTCCTCAAGTGAGACTTCAGGGAATTCATGGAATAT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17456211 76 - 93316391 TTCATTGCTTGTGTGA--CTAACTTCTGTGAAATTTCTTGATTTACCTCGAGTAGGGATTCACAGGGTTCATGAAAT-T i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3873120 77 + 3993831 TTCAGTGCTTGCGTCA--CTAACTTCTGTGAAATTTCTTGATGTATCTCAAGTGGGGATTCACAGGGTTCATGAAACAT i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16850125 78 - 59632846 TTCGGTGCTTGTGAGACTCTAACTTCTGTAAAATGTCTTG-TTTTATTCAACTAAGGATATGGTGGGTTCATGAAATAT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1340190 76 - 2520184 TTTAGGGCATGTGTTT--CTGTAGCCTCAGAAATTTCTC-ATTTTCCTTAAGAGAGGATGCACTGAGTTCATGAAATAC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=539453.000000 s hg38.chr4_KI270789v1_alt 9882 68 + 205944 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCACATGTTCTTAGGCTTAAATGTTGAAGTGTAAAT----GTTT s panTro5.chr4 192802017 68 + 194502333 aAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCACATGTTCTTAGGCTTAAATGTTGAAGTGTAAAT----GTTT i panTro5.chr4 I 431 C 0 s panPan2.chr4 192686638 68 + 195804263 AAAAGATAGAGCTAAAACAGA--CT-ATT-TCCCACATGTTCTTAGGCTTAAATGTTGAAGTGTAAAT----GTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723930 68 + 4876863 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCACATGTTCTTAGGCTTAAATGTTGAAGTGTAAAT----GTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608466 68 + 115148730 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCACATGTTCTTAGGCTTAAAGGTTGAAGTGTAAAT----GTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890579 68 + 190429646 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAATGCTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187838024 68 + 189454096 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAATGCTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24219191 68 - 25927173 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAATGCTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253587 68 + 4669795 AAAAGATGGAGCTAAAACAGA--CT-GTT-TTCCAAATGTTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210898 68 + 135778131 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAATGTTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2641277 68 - 2847728 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAATGTTCTTAGGCTTAAATGTTGAAGCATAAAT----GTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773458 68 + 2368649 AAAAGATGGAGCTAAAACAGA--CT-ATT-TCCCAAAGGTTCTTAGGCTTAAATGTTGAAGCGTAAAT----ATTT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17456287 69 - 93316391 AAGAGATAGAGCTAATATAGAACCT-ATT-TCCCAAATGATTTCATGCTTAAAAGTT-AAGTGTAAAT----GTTT i micMur3.chr14 C 0 I 4 s proCoq1.NW_012145301v1 3873197 70 + 3993831 AAAAGATAGAGCTAATATAGAACCT-ATT-TCCCAAATGATTTTAGGCTTCAAAGTTAAAGTGTAAAT----GTTT i proCoq1.NW_012145301v1 C 0 I 4402 s canFam3.chr16 16850203 58 - 59632846 -------------AATACAAA--AC-ATT-TCAT-TGTGCTCTTAGGCTTAAAAGGTAGAGTACTAATAATGGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1340266 70 - 2520184 ACACAATGTAAATAAAACGGG--CTCATTGTCCCAAATGCCCTTAGACTTAAAAATTAAAGTGCTACT----GTTT i dasNov3.JH570353 C 0 I 3700 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=216258.000000 s hg38.chr4_KI270789v1_alt 9950 45 + 205944 -AAGTTGTAtttatttatttaggacaa---------attataattgcatgtaat-------t s panTro5.chr4 192802085 45 + 194502333 -AAGTTGTAtttatttatttaggacaa---------attataattgcatataat-------t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686706 52 + 195804263 -AAGTTGTAtttatttatttaggacaa---------attataattgcatgtaatttgtgcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3723998 45 + 4876863 -AAGTTGTAtttatttatttaggacaa---------attataattgcatgtaat-------t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608534 45 + 115148730 -AAGTTGTAtttatttatttaggacaa---------attataattatatgtaat-------t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890647 41 + 190429646 -AAACTGTG----TTTATTTAGGACAA---------CTTATAATTGTATATAAT-------T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187838092 41 + 189454096 -AAACTGTG----TTTATTTAGGATAA---------CTTATAATTGTATATAAT-------T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24219259 41 - 25927173 -AAACTGTG----TTTATTTAGGACAA---------CTTATAATTGTATATAAT-------T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3253655 41 + 4669795 -AAACTGTG----TTTATTTAGGACAA---------CTTATAATTGTATATAAT-------T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134210966 41 + 135778131 -ACACTGTG----TTTATTTAGGACAA---------CTTATAATTGTATATAAT-------T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2641345 41 - 2847728 -AAACTGTG----TTTATTTAGGACAA---------CTTATAATTGTATATAAT-------T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 773526 45 + 2368649 -AAACTGTGTTTATTTATTTAGGACAA---------GTTATAATTGTATATAAT-------T i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17456360 45 - 93316391 -ATGATTTATTTGCttatttttgatag---------attataattgtatataat-------t i micMur3.chr14 I 4 C 0 s canFam3.chr16 16850261 50 - 59632846 GAGATTTT-----TTAATATAAAACTATTTGCTAGGTTTATTGCTGCATGCTAT-------T i canFam3.chr16 C 0 I 8 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=45589.000000 s hg38.chr4_KI270789v1_alt 9995 7 + 205944 gtggggt s panTro5.chr4 192802130 7 + 194502333 atggggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686758 7 + 195804263 gtgaggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3724043 7 + 4876863 gtggggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608579 7 + 115148730 gtggggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188890688 7 + 190429646 GTGGGGT i rheMac8.chr5 C 0 I 5249 s macFas5.chr5 187838133 7 + 189454096 GTGGGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24219300 7 - 25927173 GTGGGGT i macNem1.NW_012013133v1 C 0 I 5213 s cerAty1.NW_012001672v1 3253696 7 + 4669795 GTGGGGT i cerAty1.NW_012001672v1 C 0 I 5225 s chlSab2.chr7 134211007 7 + 135778131 GTGGGGT i chlSab2.chr7 C 0 I 5109 s manLeu1.NW_012102221v1 2641386 7 - 2847728 GTGGGGT i manLeu1.NW_012102221v1 C 0 I 4813 s colAng1.NW_012116221v1 773571 7 + 2368649 GTAGGGT i colAng1.NW_012116221v1 C 0 I 4503 s micMur3.chr14 17456405 7 - 93316391 atgggat i micMur3.chr14 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=10263.000000 s hg38.chr4_KI270789v1_alt 10002 7 + 205944 gcacaat s panTro5.chr4 192802137 7 + 194502333 gcacaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686765 7 + 195804263 gcacaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3724050 7 + 4876863 gcacaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608586 7 + 115148730 acacaat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187838140 7 + 189454096 ACAGAat i macFas5.chr5 C 0 I 5219 s micMur3.chr14 17456412 7 - 93316391 acacagt i micMur3.chr14 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 773578 4503 + 2368649 I e manLeu1.NW_012102221v1 2641393 4813 - 2847728 I e chlSab2.chr7 134211014 5109 + 135778131 I e cerAty1.NW_012001672v1 3253703 5225 + 4669795 I e macNem1.NW_012013133v1 24219307 5213 - 25927173 I e rheMac8.chr5 188890695 5249 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=60584.000000 s hg38.chr4_KI270789v1_alt 10009 48 + 205944 gatgttgtgatatatgcccacagtttagaatgattgaatcaagccaat s panTro5.chr4 192802144 48 + 194502333 gatgttgtgatatatgcccacagtttagaatgattgaatcaagccaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686772 48 + 195804263 gatgttgtgatatatgcccacggtttagaatgattgaatcaagccaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3724057 48 + 4876863 gatgttgtgatatatgcccacagtttagaatgattgaatcaagccaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608593 48 + 115148730 ggtgttatgatatatgcccacagtttagaatgattgaatcaagccaat i nomLeu3.chr7b C 0 C 0 s micMur3.chr14 17456419 48 - 93316391 gatgttatgatatatgcatactgtgtggaatgattgaatcaagctaat i micMur3.chr14 C 0 I 707 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 773578 4503 + 2368649 I e manLeu1.NW_012102221v1 2641393 4813 - 2847728 I e chlSab2.chr7 134211014 5109 + 135778131 I e cerAty1.NW_012001672v1 3253703 5225 + 4669795 I e macNem1.NW_012013133v1 24219307 5213 - 25927173 I e macFas5.chr5 187838147 5219 + 189454096 I e rheMac8.chr5 188890695 5249 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1533317.000000 s hg38.chr4_KI270789v1_alt 10057 1796 + 205944 gacatatccatc------tttttttttttttgacagagtcttgctctgttgcccaggctggggtgcagtggcaggatctcagctcactgcaacctccacttcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgcacaccaccatgcccagataa-tttttttttttgtattttttaatagagatggggtttcaccatgtttgccaggatggtcttgatctcttgaccttgtgagctggctgcctcagcctcccaaagtgctgggattacaggcgtgagccactgtgcccggctccccattttaaatatatatcatttattcctcctgtttaaagcttaataccctttgaccgaca--cctctcattttccctaccctccagcctctggtaaccaccgttctaccctctgcttctgtgcatttgactttttaaaattccacatgagtgagatcacagggtatttgtctctgtgcctcacttatttcacttaacatagtgtcctccaggttcatccatgttgtaaatgaaataatttctttctttttctttttt--tctttcttttttttttaaggctgaagaacattccattgtgtgtatatatctcattttctttttccatttatccattgattgacacttagattgattccatgacttggctattgtaaacaatgctgcaacaaacatggaagtgctgatatctcttagacatattaatttcaagtcctaagggtatatagttagaatagggttgctggaacatatggtaatcctatttttagttttctaagggaactccacactgttttctgtaatggctgtgctaatttatattcccaccagtgtacagtgttcccttttcttcacatcctcaccatcacggttgttatctttcctctttttgttgctagctcttctgatagatgatatatcatagttttaatttctatttccctaatgattagtgatattgagcattatatatatatatatatatatatatatatatatatatgtatatatgttggccatttgcatgtcttattttgaaaaatatttattcagtttctttgcccatttttaaattgga---ttttttttttttgctattaacttttttgagctccttatacatttggggtattagttccttatataatgtattgcttgtaaatttttttctgatctgcagattgtctcttcacttgtagttgttttctttgttgtgcaaatattttttagttaactgtaatcttacttgtctatttttgtttttgttatttgatcttttggaggtcaaataaaaaaaaaaaaaaaaaaacattgcccagaccagtgttgtgtagttttctcctctgtgttttcctagtactttttataatttcaggttttacatttaaatctttaattcattttgggtttatttttgtatactctgtgagatagggtgggactaatattattcgtctgcatgtgaatatctcattttctcattgtcctttatgggagagattgttctttacgcattgtgtgtgttcttggcatttttatcaaagtcaattgacgaagggcatcggttcatttttgtgctctctattctgttccattggtcagtgtttctgtttatactagtgtcatgctgttttaattactatggctttgtaatatagtttgaagtcaggtagtgtaagacctctagctttgttcattttgttcaagactgccttggctagtcaggcttttttgtgtgtgtttctgtatgaattttacgatttttttttcta s panTro5.chr4 192802192 1763 + 194502333 gacatatccatc----tttttttttttttttgacagagtcttgctctgttgcccaggctggagtgcagtggcaggatctcagctcactgcaacctccacttcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgcacaccaccacgcccagataa--ttttttttttgtattttttaatagagatgggatttcaccatgtttgccaggatggtcttgatctcttgaccttgtgagctggctgcctcagccccctaaagtgctgggattacaggcgtgagcccctgtgcccggctccccattttaaatatatatcatttattcctcctgtttaaagcttaataccctttgaccaaca--tctctcattttccctaccctccagcctctggtaaccaccgttctaccctctgcttctgtgcatttgactttttaaaattctgcatgagtgagatcacagggtatttgtctctgtgcctcacttatttcacttaacatagtgtcctccaggttcatccatgttgtaaatgaaataatttctttctttttct---------tttcttttttt----aggctgaagaacattccattgcgtgtatatatctcattttctttttccatttatccgttgattgacacttagattgattccctgacttggctattgtaaacaatgctgcaacaaacatggaagtgctgatatctcttagacatattaatttcaagtcctaagggtatatagttagaatagggttgctggaacatatggtaatcctatttttagttttctaaggaaactccacactgttttctgtaatggctgtgctaatttatattcccaccagtgtacagtgttcccttttcttcacatcctcaccatcacagttgttatctttcctctttttgttgctagctcttctgatagatgatatatcatagttttaatttctatttccctaatgattagtgatattgagcat--------------------tttatatatatatatatgtatatatgttggtcatttgcatgtcttattttgaaaaatatttattcagtttctttgcccatttttaaattggatttttttttttttttgccattaagttttttgagctccttatacatttggggtattagttccttataaaatgtattgcttgtaaatttttttctgatctgcagattgtctcttcacttgtagttgttttctttgttgtgcaaatgttttttagttaactgtaatcttatttgtctatttttgtttttgttatttgatcttttgggggtcaaat-----aaaaaaaaaaaaaacattgcccagaccaatgttgtgtagttttctcctctgtgttttcctagtactttttatagtttcaggttttacatttaaatctttaattcattttgggtttatttttgtatactctgtgagatagggtgggattaatattattcgtctgcatgtgaatatctcattttctcattgtcctttatgggagagattgttctttacgcattgtgtgtgttcttggcatttttatcaaagtcaattgatgcaaggcatgggttcatttttgtgctctctattctgttccattggtcagtgtttctgtttataccagtgtcatgctgttttaattactatggctttgtaatatagtttgaagtcaggtagtgtaagacctctagctttgttcattttgttcaagactgccttggctagtcaggcttttttgtgcgtgtttctgtatgaattttacga-ttttttttcta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192686820 1772 + 195804263 gacatatccatc------tttttttttttttgacagagtcttgctctgttgcccaggctagagtgcagtggcaggatctcagctcactgcaacctccacttcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgcacaccaccacgcccagataa----ttttttttgta-tttttaatagagatggggtttcactgtgtttgccaggatggtcttgatctcttgaccttgtgagctggctgcctcagcctcccaaagtgctgggattacaggcgtgagccactgtgcccggctccccattttaaatatatatcatttattcctcctgtttaacgcgtaataccctttgaccgaca--tctctcattttccctaccctccagcctctggtaaccaccgttctaccttctgcttctgtgcatttgactttttaaaattccacatgagtgagatcacagggtatttgtctctgtgcctcacttatttcacttaacatagtgtcctccaggttcatccatgttgtaaatgaaataatttctttctttttctttttttctctttcttttttttttaaggctgaagaacattccattgtgtgtatatatctcattttctttttccatttatccattgattgacacttagattgattccatgacttggctattgtaaacaatgctgcaacaaacatggaagtgctgatatctcttagacatattaatttcaagtcctaagggtatatagttagaatagagttgctggaacatatggtaatcctatttttagttttctaagggaactccacactgttttctgtaatggctgtgctaatttatattcccaccagtgtacagtgttcccttttcttcacatcctcaccatcacggttgttatctttcctctttttgttgctagctcttccgatagatgatatatcatagttttaatttctatttccctaatgattagtgatattgagcat---------------ttatatatatatatatatatatgtatatatgttggccatttgcatgtcttattttgaaaaatatttattcagtttctttgcccatttttaaattgg----ttttttttttttgctattaacttttttgagctccttatacatttggggtattagttccttatataatgtattgcttgtaaatttttttcttatctgcagattgtctcttcacttgtagttgttttctttgttgtgcaaatattttttagttaactgtaatcttacttgtctatttttgtttttgttatttgatcttttgggggtcaaat----caaaaaaaaaaaaaacattgcccagaccagtgttgtgtagttttctcctctgtgttttcctagtactttttataatttgaggttttacatttaaatctttaattcattttgggtt--tttttttatactctgtgagatagggtgggactaatattattcgtctgcttgtgaatatctcattttctcattgtactttatgggagagattgttctttacgcattgtgtgtgttcttggcatttttatcaaagtcaattgatgaaaggcatcagttcatttttgtgctctctattctgttccattggtcagtgtttctgtttatactagtgtcatgctgttttaattactatggctttgtaatatagtttgaagtcaggtagtgtaagacctctagctttgttcattttgttcaagactgccttggctagtcaggcttttttgtgtgtgtttctgtatgaattttacgatttttttttcta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3724105 1781 + 4876863 gacatatccatctttttttttttttttttttgacagagtcttgctctgttgcccaggctggagtgcagtgacaggatctcggctcactggaacctccacttcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgcacaccaccacgcccagataa-tttttttttttgtattttttaatagagatggggtttcaccatgtttgccaggatggtcttgatctcttgaccttgtgagctggctgcctcagcctcccaaagtgctgggattacaggcctgagccactgtgcccggctccccattttaaatatatatcatttattcctcttgtttaaagcttaataccctttgaccgaca--tctctcattttccctaccctccagcctctggtaaccaccgttctaccctctgcttctgtgcatttgactttttaaaattccacatgagtgagatcacagggtatttgtctctgtgcctcacttatttcacttaacatagtgtcctccaggttcatccatgttgtaaatgaaataatttctttctttttctttttt--tcttttttttttt-ttaaggctgaagaacattccattgtgtgtatatatctcattttctttttccatttatccattgattgacacttagattgattccatgacttggctattgtaaacaatgctgcaacaaacatggaagtgctgatatctcttagacatattaatttcaagtcctaagggtatatagttagaatagggttgctggaacatatggtaatcctatttttagttttctaaggaaactccacactgttttctgtaatggctgtgctaatttgtattcccaccagtgtacagtgttcccttttcttcacatcctcaccatcacagttgttatctttcctctttttgttgctagctcttctgatagatgatatatcatagttttaatttctatttccctaatgattagtgatattgagcat----------------------tttatatatatatatgtatatatgttggtcatttgcatgtcttattttgaaaaatatttattcagtttctttgcccatttttaaattggatt-ttttttttttttgctattaagttttttgagctccttatacatttggggtattagttccttataaaatgtattgcttgtaaatttttttctgatctgcagattgtctcttcacttgtagttgttttctttgttgtgcaaatgttttttagttaactgtaatcttatttgtctatttttgtttttgttatttgatcttttgggggttaaatcaaaaaaaaaaaaaaaaaacattgcccagaccaatgttgtgtagttttctcctctgtgttttcctagtactttttatagtttcaggttttacatttaaatatttaattcattttgggtttatttttgtatactctgtgagatagggtgggactaatattattcatctgcatgtgaatatctcattttctcattgtcctttatgggagagattgttctttacgcattgtgtgtgttcttggcatttttatcaaagtcaattgacacaaggcatgggttcatttttgtgctctctattctgttccattggtcagtgtttctgtttatactagtgtcatgctgttttaattactatggctttgtaatatagtttgaagtcaggtagtgtaagacctctagctttgttcattttgttcaagactgccttggctagtcaggcttttttgtgtgtgtttctgtatgaattttatgatttttttttcta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112608641 1772 + 115148730 gacatatccatc-----ttttttttttttttgatggagtcttgctctgttgcccaggctggaatgcagtggcaggatctcggctcactgcaacctccacttcctgggtttaagtgattctcctgcctcagcctcccgagtagctgggactacaggtgcacaccaccacgcccagataattttttttttttgtattttttaatagagatggtgtttcaccatgtttgccaggatggtcttgatctcttgaccttgtgagccagctgcctcggcctctcaaagtgctgggattacaggcgtgagccactgcgcctggctcctcattttaaatatatttcatttattcctcctgtttaaagcttaataccctttgactgacaagaatctcatttttcctaccgtccagcctctggtaaccaccgttctaccctctgcttctgtgtgtttgactttttaaaattcctcatgagtgagatcacagggtatttgtctctgtgcctcacttatttcacttaacataatgtcctccaggttcatccatgttgcaaatgaaataatttatttctttttctttttt--tctctcttttttttttaaggctgaagaacattccatcgtgtgtatgtatctcattttctttttccatttatccattgattgacacttagattgattccatgacttggctattataaacaatgctgcaatgaacatggaagtgctgatatctcttagacatattaatttcaagtcctaagggtatatagttagaatggggttgctggaacgtatggtaatcctattttcagttttctaaggaaactccacactgttttctgtaatggctgtgctaatttatattcccaccagtgtggagtgttcccttttcttcacatcctcaccatcacagttgttatctttcctctttttgatgctagctcttctgacagatgatacatcatagttttaatttctatttccctaatgattagtgatattgagcat--------------------tttatatatatatatatgtatatatgttggtcatttgcatgtcttcttttgaaaaatatctattcagattctttgtccatttttaaattggatt-ttttttttttttgctattaagatttttgagtttgttatacatttggggtattagttccttataaaatgtattgcttgcaaatttttttctgatctgcagattgtctcttcacttgcagttgttttctttgttgtgcaaatgttttttagtttactgtaatcttatttgtctatttttgtttttgttatttgagcttttgggggtcaaat---------ccaaaaaaaaaattgcccagaccaatgttgtgtagttttctcctctgtgttttcctagtactttttatagtttcaggtcttacatttaaatctttaattcattttgggtttatttttgtatactgtgtgaaatagggtgggattaatattattcatctgcatgtgactatctcattctctcattgtcctttatgggagagattgctctttacccattgtgtgtgttcttggcatttttatcaaagtcaattcactaaaggcatgagttcatttttatgctctctattctcttccattggtcagtatttctgtttatactagtgtcatgctgttttaattactatggctttgtaatatagtttgaagtcaggtagtgtaagacctctagctttgttcattttgttcaagactgcgttggctagtcaggcttttttgtatgtgtttctgcatgaattttagga-ttttttttcta i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 773578 4503 + 2368649 I e manLeu1.NW_012102221v1 2641393 4813 - 2847728 I e chlSab2.chr7 134211014 5109 + 135778131 I e cerAty1.NW_012001672v1 3253703 5225 + 4669795 I e macNem1.NW_012013133v1 24219307 5213 - 25927173 I e macFas5.chr5 187838147 5219 + 189454096 I e rheMac8.chr5 188890695 5249 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=763940.000000 s hg38.chr4_KI270789v1_alt 11853 417 + 205944 tttccatttgcatgaaatatctttttctgttacttcacttttagtctatttgaatctttaatagtgaggtaagtctcttgtaggtagcatatagttgggttttgtttttatacatcctatttctttgtcaagcttctcattttgtattatttttcatattttatttaatcttctatccttatattcttatagctgactgaacttctttaagagaactatattaattttttgttagttatttcatagctctccatttctttagggcctattgttgaagctttatttgtttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctcttccgtcctttacaggtattctttggcaaagttatactctcact s panTro5.chr4 192803955 417 + 194502333 tttccatttgcatgaaatatctttttctgttacttcacttttagtctatttgaatctttaatagtgaggtaagtctcttgtaggtagcatatagttgggttttgtttttatacatcctatttctttgtcaagtttctcattttgtattatttttcatattttatttaatcttctatccttatattcttatagctgactgaacttctttaagagaactatattaattttttgttagtcatttcatagatctccatttctttagggtctattgttgaagctttatttgtttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctcttctgtcctttacaggtattctttggcaaagttatactctcact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192688592 417 + 195804263 tttccatttgcatgaaatatctttttctgttacttcacttttagtctatttgaatctttaatagtgaggtaagcctcttgtaagtagcatatagttgggttttgtttttatacatcctatttctttgtcaagcttctcattttgtattatttttcatattttatttaatcttctatccttatattcttatagctgactgaacttctttaagagaactatattaattttttgttagttatttcatagatctccatttctttagggtctattgttgaagctttatttgtttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctcttctgtcctttacaggtattctttggcaaagttatactctcact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3725886 417 + 4876863 tttcCATTTGCATGAAATATCTTTTTCTGTTACTTCACTTTTAGTCTATTTGAATCTTTAATAGTGAGGTAAGTCTCTTGTAAGTAGCATATAGTTGGGTTTTGTTTTTATACAtcctatttctttgtcaagtttctcactttgtattatttttcatattttatttaatcttctatccttatcttcttatagctgactgaacttctttaagagaactatattaattttttgttagtcatttaatagatctccatttctttagggtctattgttgaagctttatttgtttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctcttctgtcctttacaggtattctttggcaaagttatactctcact i gorGor5.CYUI01015356v1 C 0 I 122 s nomLeu3.chr7b 112610413 417 + 115148730 tttccatttgcatgaaatatctttttctgctacttcactattagtctgtttacatctttaatagtgaggtaagtctcttgtaggtagcatatagttgggtcttatttttatacatcctatttctttgtcaagattctcattttgtattatttttcatattttatttaatcttctatccttatattcttgtagttgactgaacttctttaagagaactatatgaattttttgttagtcatttcatagatctccatttctttagaatctattgttgaagctttatttgcttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgttcatttgaagaaatggtcactccttctgtcctttacaggtattctttggcaaagttatactgtcact i nomLeu3.chr7b C 0 I 61 s manLeu1.NW_012102221v1 2646206 416 - 2847728 tttccatttgaatgaaatatctttttctgtcacttcacttttagtctatttgcatctttaatagtgaggtaagtctcttgtaggta-catatagttgggtcttgtttttATACATCGtatttctttgtcaaacttctcattttgtattatttttcatattttatttaatcttctatccttatgttcttatagttgactgaacttctttaagagaactatatgaagtttttgttagtcatttcatagatctccatttctttagggtctattgttgaagctttatttgtttcttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctcttttgttcttgacaggtattctttggcaaagttatactctcagt i manLeu1.NW_012102221v1 I 4813 C 0 s colAng1.NW_012116221v1 778081 416 + 2368649 tttccatttgcatgaaatatctttttctgtcacttcacttttagtctatttgcatctttaatagtgaggtaagtctcttgtaggta-catatagttgggtcttgtttttatacattgtatttctttgtcaaacttctccttttgtattatttttcatattttatttaatcttctatccttatattcttatagtcgactgaacttctttaagagaactatatgaattttttgttagtcatttcatagatctccatttctttagggtctattgttgaagctttatttgtttgttctggagatgtcattattctgattcttcataatctttgtgtccttacattggtgcttgtgcatttgaagaaatggtcacctctttcattcttgacaggtattctttggcaaaattatactctcact i colAng1.NW_012116221v1 I 4503 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e chlSab2.chr7 134211014 5109 + 135778131 I e cerAty1.NW_012001672v1 3253703 5225 + 4669795 I e macNem1.NW_012013133v1 24219307 5213 - 25927173 I e macFas5.chr5 187838147 5219 + 189454096 I e rheMac8.chr5 188890695 5249 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=9121.000000 s hg38.chr4_KI270789v1_alt 12270 4 + 205944 gaag s panTro5.chr4 192804372 4 + 194502333 gaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192689009 4 + 195804263 gaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3726425 4 + 4876863 gaag i gorGor5.CYUI01015356v1 I 122 C 0 s nomLeu3.chr7b 112610891 4 + 115148730 gaag i nomLeu3.chr7b I 61 C 0 s macFas5.chr5 187843366 4 + 189454096 GAAC i macFas5.chr5 I 5219 C 0 s manLeu1.NW_012102221v1 2646622 4 - 2847728 gaag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 778497 4 + 2368649 gaag i colAng1.NW_012116221v1 C 0 I 61 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e chlSab2.chr7 134211014 5109 + 135778131 I e cerAty1.NW_012001672v1 3253703 5225 + 4669795 I e macNem1.NW_012013133v1 24219307 5213 - 25927173 I e rheMac8.chr5 188890695 5249 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=108785.000000 s hg38.chr4_KI270789v1_alt 12274 21 + 205944 tctagcctgtgattctaggtc s panTro5.chr4 192804376 21 + 194502333 tctagcctgtgattctaggtc i panTro5.chr4 C 0 I 122 s panPan2.chr4 192689013 21 + 195804263 tctagcctgtgattctaggtc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3726429 21 + 4876863 tctagcctgtgattctaggtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112610895 21 + 115148730 tctagcctgtgattctaggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188895944 21 + 190429646 tctagcctgtgattctagctg i rheMac8.chr5 I 5249 C 0 s macFas5.chr5 187843370 21 + 189454096 tctagcctgtgattctagctg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24224520 21 - 25927173 tctagcctgtgattctagctg i macNem1.NW_012013133v1 I 5213 C 0 s cerAty1.NW_012001672v1 3258928 21 + 4669795 tctagcctgtgattctagctg i cerAty1.NW_012001672v1 I 5225 C 0 s chlSab2.chr7 134216123 21 + 135778131 tctagcctgtgattctagctg i chlSab2.chr7 I 5109 C 0 s manLeu1.NW_012102221v1 2646626 21 - 2847728 tctagcctgtaagtctatatg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 778562 21 + 2368649 tccagcctgtgattctagctg i colAng1.NW_012116221v1 I 61 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=3393398.000000 s hg38.chr4_KI270789v1_alt 12295 601 + 205944 ggctacctggtaatggcgctaagcaggtagagc------------------------------------------------------------ttggcgttagactctctagcttgctgagcctctgcctttgctttgagatcagatggatctgagctcttctatttggtgagaccactggctgggttctgcaatcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattccctagttaaatggtactgctgtttgacttttggaatttgggtagggctgcagattgggtcctaagctt-aggctgagtcactgattgggagagtcaggatcagctgctaagtttggcagaaatgcacaatattgaggtttacttccctgcctggatgtagctttggtgtgggatttgaggttgaggtgagctgctatttgaactcccagactggggtggtctagcccctgtatgtagccaagatatgccatggtgggtgtctcactccatgagcagggtcttcttgggtctggttcttgggatggacttttaggttgagccaaactcctcttaaatgcccaggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtatctctcttctcagcaggagga s panTro5.chr4 192804519 601 + 194502333 ggctgcctggtaacggcgctaagcaggtagagc------------------------------------------------------------ttggcgttagactctctagcttgctgagcctctgcctttgctttgagatcagatggatctgagctcttctatttggtgagaccactggctcggttctgcaatcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattccctagttaaatggtactgctgtttgacttttggaatttgggtagggctgcagattaggtcctaaggtt-aggctgagtcactgattgggagaatcaggatcagctgctaagtttggtagaaatgcataatattgagctttgcttccctgcctggatgtagctttggtgtgggatttgaggttgaggtgagctgctatttgaactcccaggttggggtggtctagccccagtatgtagccaagatatgccatgatgggtgtctcactccatgagcagggtcttcttgggtctggttcttgggatgaacttttaggttgagccaaactcctcttaaatgcccaggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtatctctcttctcagagggagga i panTro5.chr4 I 122 C 0 s panPan2.chr4 192689034 601 + 195804263 ggctacctggtaacagcgctaagcaggtagagc------------------------------------------------------------ttgacgttagactctctagcttgctaagcctctgtgtttgctttgagatcagatggatctgagctcttctatttggtgagaccactggctcggttctgcaatcaggcagagacggtagctgggtcctctgattggatgaagacacaatgtgtattccctagttaaatggtactgctgtttgacttttggaatttgggtagggctgcagattgggtcctaagctt-aggctgagtcactgattgggagagtcaggatcagctgctaagtttggcagaaatgcacaatattgaggtttatttctctgcctggacgtagctttggtgtgggatttgaggttgaggtgagctgctatttgaactcccagattggggtggtctagcccctgtatgtagccaagatatgccatggtgggtgtctcactccatgagcagggtcttcttgggtctggttcttgggatggacttttaggttgagccaaactcctcttaaatgcccaggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtatctctcttctcagcgggagga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3726450 599 + 4876863 ggctacctggtaatggcgctaagcaggtagagc------------------------------------------------------------ttggcgttagactctctagcttgctgagcctctgcctttgctttgagatcagatggatctgagctcttctatttggtgagaccactggctgggttctgcaatcaggcagagatggtagctgggtcctctga-tggatgaagacacaatgtgtattccctagttaaatggtactgctgtttgacttttggaatttgtgtagggctgcagattaggtcctaaggtt-aggctgagtcactgattgggagagtcaggatcagctgctaagtttggcagaaatgc-caatattgaggtttacttccctgcctggacgtagctttggtgtgggatttgaggttgaggtgagctgctatttgaactcccaggttggggtggtctagcccctgtatgtagccaagatatgccatggtgggtgtctcactccatgagcagggtcttcttgggtctggttcttgggatggacttttaggttgagccaaactcctcttaaatgcccaggtggtgcaagtatagtccctgcgctttgccaaaatactctgtggtaggtatctctcttctcagtgggagga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112610916 601 + 115148730 ggctacctggtaacggcgctaagcaggcagagc------------------------------------------------------------ttggcgttagactgtctagcttgctgagcctctgcctttgctttgagatcagatggatctgagctcttctatttggtgagaccactggctgggttctgcagtcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattccctagctaaatggtactgctatttgacttttggaatatgggtagggctgtagattgggtcctaagctt-aggctgagtcactgattgggagagtcaggatcagctgctaagtttggcagaaatgcacaatattgaggtttgcttccctgtctggatgtagccttgatgtgggatttgaggctgaggtgagctgctatttgaactcccaggttggggtggtcttgcccttgtacgtagccaagatatgccatggtgggtgtctcactccatgagcaggatcttcttgggtctggttcttgggatggacttttaggttgagccaagctgctcttaaatgcccaggtggtgcaagtatagtccacgtgctttgccaaaatactctgtggtaggtgtctctcttctcagcgggagga i nomLeu3.chr7b C 0 I 120 s rheMac8.chr5 188895965 602 + 190429646 gactacctggtaatgacgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctgtgctttgagatcagatggatctgagctcttctatttggtgagacccctggctgggttctgcagtcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattctctagctaaatggtactgctattggacttttggaatttgggtaggactgcaggttgggtcctaaagttaaggctgagtcattgattgggagagtcaggatcagctgctaagtttgacagaaatacacaatattgaggtttgcttccttgcctggatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagactggggtggcctagtccctgtgcttagccaagatatgccatggtggttgtctcactccatgagcagggtcttcttaggtctgcttcttggggtaggctttgagggcgagccaagctgctcttaaatgccccggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtgtctctctcctcagtgggagga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187843391 602 + 189454096 gactacctggtaatgacgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctgtgctttgagatcagatggatctgagctcttctatttggtgagacccctggctgggttctgcagtcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattctctagctaaatggtactgctattggacttttggaatttgggtaggactgcaggttgggtcctaaagttaaggctgagtcattgattgggagagtcaggatcagctgctaagtttgacagaaatacacaatattgaggtttgcttccttgcctggatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagactggggtggcctagtccctgtgcttagccaagatatgccatggtggttgtctcactccatgagcagggtcttcttaggtctgcttcttggggtaggctttgagggcgagccaagctgctcttaaatgccctggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtgtctctctcctcagtgggagga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24224541 602 - 25927173 gactacctggtaatgacgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctgtgctttgagatcagatggatctgagctcttctatttggtgagacccctggctgggttctgcagtcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattctctagctaaatggtactgttattggacttttggaatttgggtaggactgcaggttaggtcctaaagttaaggctgagtcattgattgggagagtcaggatcagctgctaagtttgacagaaatacacaatattgaggtttgcttccttgcctggatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagactggggtggcctagtccctgtgcttagccaagatatgccatggtggttgtctcactccatgagCAAGGTCTTCTTAGGTCTGCttcttggggtaggctttgagggcgagccaagctgctcttaaatgccctggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtgtctctctcctcagtgggagga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3258949 602 + 4669795 ggctacctggtaatgacgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctgtgctttgagatcagatggatctgagctcttctatttggtgagacccctggctgggttctgcagtcAGGCAGAGATGGTAGCTGGGTCCTCTGATTGGGTGAAGACACAATGTGTATTCTCTAGCTAAATGGTACTGCTATTGGACTTTTGGAATTTGGGTAGGACTGCAGGTTGGGTCCTAAAGTTAAGGCTGAGTCATTGATTGGGAGAGTCAGGATCAGCTGCTAAGTTTGACAGAAATACACGATATTGAGGTTTGCTTCCTTGCCTGGATGTAGCCTTGTTGTGGGATTTGAGGTTGAGGTGAGCAGCTATTTGAACTCCCAGACTGGGGTGGCCTAGTCCCTGTGCTTAGCCAAGATATGCCATGGTGGTTGTCTCACTCCATGAGCAGGGTCTTCTTAGGTCTGCttcttggggtaggctttgagggcgagccaagctgctcttaaatgccctggtggtgcaagtatagttcctgtgctttgccaaaatactctgtggtaggtgtctctctcctcagtgggagga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134216144 600 + 135778131 gactacctggtaatgacgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctttgctttgagatcagatggatctgagctcttatatttggtgagacccctggctgggttctgcaatcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattctctagctaaatggtactgctattggac-tttggaatttgggtaggactgcaggttgggtcctaaagtt-aggctgagtcattgattgggagagtcaggatcagctgctgagtttggcagaaatacacgatattgaggtttgctttcctgcctggatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagactggggtggcctagtccctgtgcttagccaagatatgccatggtggttgtctcactccatgaggagggtcttcttgggtctgcttcttggggtgggctttgagggtgagccaagctgctcttaaatgccctggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaagtgtctctctcctcagtgggagga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2646647 661 - 2847728 ggctacctggtaatgacgctaagcaagcagagcttgGAagtccagcctgtgattctaggtgggtacctggtaacgatgctaagcaggcagaggttggtgttagactctctagcttgctgagtctctgcctgtgctttgagatcagatggatctgagctcttctatttggtgagacccctggctgggttctgcagtcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattcactagctaaatggtactgctgttggacttttggaatttgggtaggactgcaggttgggtcctaaagtt-aggctgagtcattgattgggagagtcaggatcagctgctaagtttgacagaaatacacgatattgaggtttgcatccttgtctggatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagactggggtggcctagtccctgtgcttagccaagatatgccatggtggttgtctcactccatgagcagggtcttcttaggtctgcttcttggggtaggctttgagggcgagccaagctgctcttaaatgccctggtggtgcaagtatagtccctgtgctttgccaaaatattctgtggtaggtgtctctctcctcagtgggagga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 778583 601 + 2368649 gactacctggtaatgatgctaagcaggtagagc------------------------------------------------------------ttggtgttagactctctagcttgctgagtctctgcctttgctttgagatcagatggatctgagctcttctatttggtaagaaccctggctgggttctgcaatcaggcagagatggtagctgggtcctctgattggatgaagacacaatgtgtattccctagctaaatggtactgctattggacttctggaatttgggtaggactgcaggttgggtcctaaagtt-aggctgagtcattgattgggagagtcaggatcagctgctaagtttggcagaaatatacaatattgaggtttgcttccctgcctgtatgtagccttgttgtgggatttgaggttgaggtgagcagctatttgaactcccagattggggtggcctagtccctgtgcttagccaagatacgccatggtggttgtctcactccatgagcagggtcttcttgggtctgcttcttggggtgggctttgagggtgagccaagctgctcttaaatgccctggtggtgcaagtatagtccctgtgctttgccaaaatactctgtggtaggtgtctctctcctcagtgggagga i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=341885.000000 s hg38.chr4_KI270789v1_alt 12896 70 + 205944 agttgggggaagcctgaagctgagcatggaggctgagcatctagggatttaagctagattgatctttcca s panTro5.chr4 192805120 70 + 194502333 agttgggggaagcctgaagctgagcatggaggctgagcatctagggatttaagctagattgatctttcca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192689635 70 + 195804263 agttgggggaagcctgaagctgagcatggaggctgagcgtctaggaatttaagctagattgatctttcca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3727049 70 + 4876863 agttgggggaagcctgaagctgagcagggaggctgagcgtctagggatttaagctagattgatctttcca i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188896567 70 + 190429646 agttgggtgaagcctgaagctgagcatgggggctgagcatctagggatttaagctagattgatctttcta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187843993 70 + 189454096 agttgggtgaagcctgaagctgagcatgggggctgagcatctagggatttaagctagattgatctttcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24225143 70 - 25927173 agttgggtgaagcctgaagctgagcatgggggctgaacatctagggatttaagctagattgatctttcta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3259551 70 + 4669795 agttgggcgaagcctgaagctgagcatgggggctgagcatctagggatttaagctagattgatctttcta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134216744 70 + 135778131 agttgggcgaagcctgaagctgagcatgggggctgagcatctagggatttaagctagattgatctttcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2647308 70 - 2847728 agttgggcaaagcctgaagctgagcatgggggctgaacatctaggggtttaagctagattgatctttcta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 779184 70 + 2368649 agttgggcgaagcctgaagctgagcatgggggctgagcatctagggatttaagctagattgatctttcta i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e nomLeu3.chr7b 112611517 120 + 115148730 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=3179687.000000 s hg38.chr4_KI270789v1_alt 12966 616 + 205944 ctgtgcttctggggtaaccagcttagctttgcaggtgggctatggtactcccacctatgtggtgctgtttaagaggctactactggtacctctcatcaggtgcctctgctgacagtaatgcagagctaccaccaagatacaagccctgtctactgtgagtaacatctcctttctttgcttgtatttgaccccaggtgacctagtcatgccatgatcccatgtttcccatgaggtgagaacagattgggcttcctgagaggcatcttggagtgctagttaagctggatggccaccttatgttttatttttccactttagaaactgtggacc-aggggaatcctctctatgtggcactgtgcccatt-ggggagggggaaggggtagcacagtcagagtgacactgttgt--tacctgtctgatgtagtttttatgtggttctgtctcaggtttatttacaattttggaatttttgccaagatggtcttgtatagaaatagttgctagttgaccttttttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATTTTTAATATAAAGCTATTCCCTAGGTTAATTGCTT s panTro5.chr4 192805190 612 + 194502333 ctgtgcttctggggtaaccagcttagctttgcaggtgggctatggtactcccacctatgtggtgctgtttaagaggctactactagtacctctcatcaggcacctctgctgacagtaactcagagctaccaccaagatacaagccctgtctactgtgagtaacatctcctttctttgcttgtatttgaccccaggtgacctagtcatgccatgatcccatgtttcccatgaggtgagaacagattgggcttcctgagaggcatcttggagtgctagttaagctggatggccaccttatgttttatttttccactttagaaactgtggacccaggggaatcctctctatgtggtactgtgcccact-ggggagggggaaggggtagcacagtcagagtgacactgttgt--tacctgtctgatgtagtttttatgtggttctgtctcaggtttatttacaattttggaattttcgccaagatggtcttgtatataaatagttgctagttgacctttcttt-----gggaagagctgagatgtcccattctgccatcttgctgatatcactcCCTTTGTTTC-AAAATTTTTAATTTAAAGCTATTCCCTAGGTTAATTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192689705 612 + 195804263 ctgtgcttctggggtaaccagcttagctttgcaggtgggctatggtactcccacctatgtggtgctgtttaagaggctactactggtacctctcatcaggtgcctctgctgacagtaactcagagctaccaccaagatacaagccctgtctactgtgagtaacatctcctttctttgcttgtatttgaccccaggtgacctagtcatgccatgatcccatgtttcccatgaggtgagaacagattgggcttcctgagaggcatcttggagtgctagttaagctggatggccaccttatgttttatttttccactttagaaactgtggatccaggggaatcctctctatgtggcactgtgcccact-ggggagggggaaagggtagcacagtcacagtgacactgttgt--tacctgtctgatgtagtttttatgtggttctgtctcaggtttatttacaattttggaattttcgccaagatggtcttgtatataaatagttgctagttgacctttcttt-----gggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATTTTTAACATAAAGCTATTCCCTAGGTTAATTGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3727119 619 + 4876863 ctgtgcttctggggtaaccagcttagctttgcaggtgggctatggtactcccacctatgtggtgctgtttaagaggctactactggtacctctcatcaggtgcctctgctgacagtaacgcagagctaccaccaagatacaagccctgtctactgtgagtaacatctcctttctttgcttgtatttgaccccaggtgacctagtcatgccatgatcccatgtttcccatgaggtgagaacagattgggcttcctgagaggcatcttggagtgctagttaagctggatggccaccttatgttttatttttccactttagaaactgtggacccaggggaatcctctctatgtggcactgtgcccattaggggagggggagggggtagcacagtcagagtgacactgttctg-ttcctgtctgatgtagtttttatgtggttctgtctcaggtttatttacaattttggaattttcgccaagatggtcttgtatataaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATTTTTAATATAAAGCTATTCCCTGGGTTAATTGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112611637 582 + 115148730 ctgtgattctgggtaagc--gcttagccttgca-gtgggctacgg-----------------------------------tactggtacctctcatcagttgcctctgctgacagtaacacagagctaccaccaagatacaagccctgtctactgtgagtaacacctcctttctttgctagtatttgaccctaggtggcctagtcatgccataatctcatgtttcccatgaagtgagaccagattgggcttcctgagagacatcttggagtgctagttaaactggatggccacctaacattttatttttccactttagaaactgtggacccaggggaatcctctctatgtggcactgtgcccattaggggagggggagggggtagcacagtcagagtgacactgttgtgttacctgtctgatgtagtttttatgtggttctgtctcaggtttatttacaattttggaattttcgccaagatggtcttgtatataaatagttgctagctgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATTTTTAATATAAAGCTATTCCCTAGGTTAATTGCTT i nomLeu3.chr7b I 120 C 0 s rheMac8.chr5 188896637 580 + 190429646 ctgtgctcctggggtaaccaacttagctttggaggtgggctatgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggccactgtgagcaacacctcctttctttgcttgtatttgaccccagctggcatagtcatgccataatcccatgtttcccatgagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctc--tgtggcattgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccatctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATGTTTAATATAAAGCTGTTCCCTAGGTTAATTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187844063 580 + 189454096 ctgtgctcctggggtaaccaacttagctttggaggtgggctatgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggccactgtgagcaacacctcctttctttgcttgtatttgaccccagctggcatagtcatgccataatcccatgtttcccatgagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctc--tgtggcattgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccatctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATGTTTAATATAAAGCTGTTCCCTAGGTTAATTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24225213 580 - 25927173 ctgtgctcctggggtaaccaacttagctttggaggtgggctatgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggccactgggagcaacacctcctttctttgcttgtatttgaccccagctggcatagtcatgccataatcccatgtttcccatgagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctc--tgtggcattgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccatctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATGTTTAATATAAAGCTGTTCCCTAGATTAATTGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3259621 583 + 4669795 ctgtgctcctggggtaaccaacttagctttggaggtgggctgtgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggccactgtgagtaacacctcctttctttgcttgtatttgaccccagctggcatagtcatgccataatcccatgtttcccatgagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctctatgtggcactgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccgtctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTCAAAAATGTTTAATATAAAGCTGTTCCCTAGGTTAATTGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134216814 582 + 135778131 ctgtgctcctggggtaaccaacttagctttggaggtgggctatgg-----------------------------------tactggtatctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggccactgtgagtaacacctcctttctttgcttgtatttgaccccagctggcatagtcatgccataatcccgtgtttcccatcagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctctctgtggcattgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccgtctaatgtagtttttatgcagttctgtctcaggtttgtttacagtcttggagttttcaccaagatggtcttgtatgtaaatagttgctagatgacctttcttttggaagggaagagctgagatgtcctgttctgccatcttgctgatatcattcCCTTTGTTTC-AAAATGTTTAATATAAAGCTGTTCCCTAGGCTAATTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2647378 582 - 2847728 ctgtgctcctggggtaaccaacttagcttt-taggtgggctatgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaaa--ctggccactgtgagtaacacctcctttctttgcttgtatttgaccccagctggcacagtcatgccataatcccatgtttcccatgagatgagaccagactaggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccacttcagaaactgcagacccaggggaatcctctctatgtagcattgtgcccatt-aggggagaccgaggggtagcacagtcagagtgacactgttctgttacccgtctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTCAAAAATGTTTAATATAAAGCTGTTCCCTAGGTTAATTGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 779254 569 + 2368649 ctgtgctcctggggtaaccaacttaactttggaggtgggctatgg-----------------------------------tactggtacctctcatcaggtgcctctgctgacagtaacacagagctacccccaagatacaag--ctggcca-------------ctcctttctttgcttgtatttgaccccagctggcatagccatgccataatcccatgtttcccatgagatgagaccagactgggcttcctgagaggcatcttggaatgctagttaagctggatggccaccttaggttttatttttccactttagaaactgcagacccaggggaatcctctctatgtggcattgtgcccgtt-gggggagactgaggggtagcacagtcagagtgacactgttctgttacccgtctaatgtagtttttatgcagttctgtctcaggtttgtttacaattttggagttttcaccaagatggtcttgtatgtaaatagttgctagttgacctttcttttggaagggaagagctgagatgtcctattctgccatcttgctgatatcattcCCTTTGTTTC-AAAATGTTTCATATAAAGCTGTTCCCTAGGTTAACTGCTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850311 8 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=3032737.000000 s hg38.chr4_KI270789v1_alt 13582 536 + 205944 CTAAATGTGAAGGTTGTA-TTATATCA-AAAGATATAAATTTGGAGTCACATCAAAAGAAAGAAGAA---GAGTGAGAAAAACTACTTTAAATCAATTATGAGGTC-AAATA-TGTGCTCCAAAATATTT-TTTTTCTTTTGCAATGTAAGGATCAATTCAGAAAAAAG-AAAATGTTTGC-AGAGGCCTTTCTTAAATGATATTTTTTCTTAATTTTTATCAACGATTGCTGCTTGTGTTTAGTTTTAttttaaacagctttattgaactatgatcgacatacactaaact-taaacatttgacaaattttgacatatatatatatatatacatatatata------------------------aaacatcactatagt-aaaaaaatgagaatatccatttcccaaaagttttctcttgcccctggta-gtctcttgcacctgacctttcctgccacctctcccttccaaaaacagtatatactccatttttttctggcttcttttatttatgtcattcagaatgaatattttgagatttatccaagttgtagcatgttattaatagttt s panTro5.chr4 192805802 531 + 194502333 CTAAATGTGAAGGGTGTA-TTATATCA-AAAAATATAAATTTGGAGTCACATCAAAAGAAAGAAGAA---GAGTGAGAAAAACTACTTTAAATCAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAATGTAAGGATCAATTCAGAAAAAAG-AAAATGTTTGC-AGAAGCCTTTCTTAAATGTTATTTTTTCTTAATTTTTATCAACAATTGCTCCTTGTGTTTAGTTTTAttttaaacagctttattgaactatgatcgacatacactaaact-taaacatttgacaaattttgacatatatatataca----catatatata------------------------aaacatcactatagt-aaaaaaatgagaatatccatttcccaaaagttttctcttgcccctggta-gtcTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactccatttttttctggcttcttttatttatgtcattcagaatgaatattttgagatttatccaagttgtagcatgttattaatagttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192690317 515 + 195804263 CTAAATGTGAAGGTTGTA-TTATATCA-AAAAATATAAATTTGGAGTCACATCAAAAGAAAGAAGAA---GAGTGAGAAAAACTACTTTAAATCAATTATGAGGTC-AAATA-TGTGCTCCAAAATATTT-TTTT-CTTTTGCAATGTAAGGATCAATTCAGAAAAAAG-AAAATGTTTGC-AGAGGCCTTTCTTAAATGTTATTTTTTCTTAATTTTTATCAACGATTGCTGCTTGTGTTTAGTTTTAttttaaacagctttattgaactatgatcgacatacac-------taaacatttgac-aattttgacatatatatatata--------------------------------------aaacatcactatagt-aaaaaaatgagaatatccatttcccaaaagttttctcttgcccctGGTACGTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactccatttttttctggcttcttttatttatgtcattcagaatgaatatgttgagatttatccaagttgtagcatgttattaatagttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3727738 530 + 4876863 CTAAATGTAAAGGGTGTA-TTATATCA-AAAAATGTAAATTTGGAGTCACATCAAAAGAAAGAAGAA---GAGTGAGAAAAACTACTTTAAATCAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAATGTAAGGATCAATTCAGAAAAAAG-AAAATGTTTGC-AGAGGCCTTTCTTAAATGTTATTTTTTCTTAATTTTTATCAATGATTGCTGCTTGTGTTTAGTTTTAttttaaacatctttattgaactatgatcgatatacactaaact-taaacatttgacaaattttgacatatatatatata----catatatata------------------------aaacatcactatagt-aaaaaaatgaaaatattcatttcccaaaagttttctcttgcccctggta-gtctcttgcacctgacctttcctgccacctctcccttccaaaaacagtatatactcca-ttttttctggcttcttttatttatgtcattcagaatgaatattttgagatttatccaagttgtagcatgttattaatagttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112612219 528 + 115148730 CTAAATGTGAAGGGTATA-TCGC-----AAAAATATAAATTTGGAGTCACATCAAAAGAAAGAAGAA---CAGTGAGAAAAACTACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAATGTAAAGATCAATTCAGAAAAAAG-AAAATGTTTGC-AGAGGCCTTTCTTAAATGTTATTTTTTCTTAATTTTTATCAACGATTGCTGCTTGTGTTTAGTTTTAttttaaacagctttattgaactatgattgacatacactaaact-taaacatttgacaaattttgacatatatgtatata--tacatatatata------------------------aaacatcactatagt-aaaaaaatgagaatatccatttcccaaaagttttctcttgcccctggta-gtctcttgcacctgacctttcctgctacctctcccttccaaaaacagtatatactcca-ttttttctggcttcttttatttatgtcattcagaataaatattttgagatttatccaagttgtagcatgttattaatagttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188897217 539 + 190429646 CTAAATGTGAAGGGTATA-TTATATTGCAAAAATTTAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACCACTT----TAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCAGGGGGCCTTTCTTAAATGTTATTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTATTTTAAGCAGCTTTACTAAACTATGATCGACATACACTAAACT-CAAACATTTGACAAATTTTGACATacacacacacacacacacacacacacacacacacac-------------aAA-ATCACTACAGT-AAAAAAATGAGAATATCCATTTCCTGAAAGTTTTCTCTTGCTCCTGGTA-GTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactctttctttttctggattcttttatttttgtcattcagaataaatatttggagacttatccaagttgtagcatgttattgatagttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187844643 544 + 189454096 CTAAATGTGAAGGGTATA-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACTACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCAGGGGGCCTTTCTTAAATGTTTTTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTATTTTAAGCAGCTTTACTAAACTATGATCGACATACACTAAACT-CAAACATTTGACAAATTTTGACATacacacacacacacacacacacacacacacacacac-------------aAACATCACTACAGT-AAAAAAATGAGAATATCCATTTCCCGAAAGTTTTCTCTTGCCCCTGGTA-GTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactctttctttttctggattcttttatttttgtcattcagaataaatatttggagacttatccaagttgtagcatgttattgatagttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24225793 541 - 25927173 CTAAATGTGAAGGGTATA-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACTACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCAGGGGGCCTTTCTTAAATGTTATTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTATTTTAAGCAGCTTTACTAAACTATGATCGACATACACTAAACT-CAAACATTTGACAAATTTTGACATATacacacacacacacacacacacagacacaca----------------AAACATCACTACAGT-AAAAAAATGAGAATATCCATTTCCCGAAAGTTTTCTCTTGCCCCTGGTA-GTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactctttctttttctggattcttttatttttgtcattcagaataaatatttggagacttatccaagttgtagcatgttattgatagttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3260204 533 + 4669795 CTAAATATGAAGGGTATA-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACTACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCAGGGGGCCTTTCTTAAATGTTATTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTAttttaagcagctttactaaactatgatcgacatacactaaact-gaaacatttgacaaattttgacatatacacacacacacacatataaaaa------------------------aaacatcactacagt-aaaaaaatgagaatatccatttcccgaaagttttctcttgcCCCTGGTA-GTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactctttctttttctggattcttttatttttgtcattcagaataaatatttggagacttatccaagttgtagcatgttattgacagttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134217396 540 + 135778131 CTAAATGTGAAGGGTATA-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACTACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGC-AGGGGCCTTTCTTAAATGTTATTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTATTTTAAGCAGCTTTACTAAACTATGATCGACATACACTAAACT-CAAACATTTGACAAATTTTGACatatatatatatacacacacacatatatatatata----------------AAACATCACTACAGT-AAAAAAATGAGAATATCCATTTCCCGAAAGTTTTCTCTTGCCCCTGGTA-GTCTCTTGCACCTGACCTTTCCTGCCACCTCTCCCTTCCAAAAacagtatatactctttctttttctggattcttttatttttgtcattcagaataaatatttggagacttacccaagttgtagcatgttatcgatagttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2647960 538 - 2847728 CTAAATGTGAAGGGTATA-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACCACTTTAAATAAATTATGAGGTC-AAATA-TATGCTCCAAAATATTT-CTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCGGGGGGCCTTTCTTAAATGTTATTTTTTCATAATTTTTATCCACGATTGTTTCTTGTATTTAGTTGTATTTTAAGCAGCTTTACTAAACTATGATCGACATACACTAAACT-CAAACATTTGACAAATTTTGac----acatatacacacacacacacacacaTATAAA----------------AAACATCACTACAGTAAAAAAAATGAGAATATCCATTTCCCGAAAGTTTTCTCTTGCCCCTGGTA-GTCTCTTGCACCTCACCTTTTCTGCCACCTCTCCCTTCCAAACacagtatatactctttctttttctgaattcttttatttttgtcattcagaataaatatttggagacttatccaagttgtagcatgttattgatagttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 779823 552 + 2368649 CTAAATGTGAAGGGTATG-TTATATTGCAAAAATATAAACTTGGAGTCACATCAAAAGAAAGAAGAA-------AAGAAAAACTACTTTAAATAAATTACGAGGTC-AAATA-TATGCTCCAAAATATTT-TTTT-CTTTTGCAACGTAAGGATCAATTCAGAAAAAAG-AAAACGTCTGCAGAGGGCCTATCTTAAATGTTATTTTTTCATAATTTCTATCCACGATTGTTTCTTGTATTTAGTTGTAttttaagcagctttactaaactaagatcgacatacactaaact-caaacatttgacaaattttgacatacgtatacacacacacacacacacacacacacacacacatacacatataaaacatcactacagt-aaaaaaatgagaatatccatttcccaaaagttttctcttgcccctggta-gtcTCTTGCACTTGGCCTTTCCTGCCACCTC-----TCCAAAAACAGTATATACTCTTTCTTTTTCTGAATTCTTTAATTTTTGTCAGTCAGAATAAATACTTGGagacttatccaagttgtagcatgtaattaatagttt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16850319 517 - 59632846 CTAAATATGAAAGATATGTTTATACTTTGAAAACATGGATTTGGAGTCACATGGAAGGAAAGAGGGAGGAGAATGAGAAGAATTACTTTAAATAAATTATAAGGTCTTAATATTATACTACAAAATGTTTCCCCT-cttcttctccataagggtcaattaaaaaaaaaataaaatgtttatacactgcatttcttAAATGTTATTCTTTCATAATTTTTCTTAACTA-------TTGTGTTTAGTTTTAttttaagcagatttattgaagtataactgacacacactaaattgtactaatctgataaattttgacatatacatacacccatga---------------------------------agccatcattacaatcaagataaggagcttatttacccctcaaa--ttccttcttgcctctggta-atctctcacacttgatctttcccaccacct-tcctctttacgtgtagtatatactca--ttttgtttagcttcctctat---------tcagaataaatattttgagatttatccatgttgtaccatggtatcagtagttt i canFam3.chr16 I 8 I 222 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=24618.000000 s hg38.chr4_KI270789v1_alt 14118 4 + 205944 attg s panTro5.chr4 192806333 4 + 194502333 attg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192690832 4 + 195804263 attg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3728268 4 + 4876863 attg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112612747 4 + 115148730 attg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188897756 4 + 190429646 attg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187845187 4 + 189454096 attg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24226334 4 - 25927173 attg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3260737 4 + 4669795 attg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134217936 4 + 135778131 attg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2648498 4 - 2847728 attg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 780375 4 + 2368649 attg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16850836 222 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=483465.000000 s hg38.chr4_KI270789v1_alt 14122 84 + 205944 tt-tttggtgttgtgtggtatttcattgaatggttagacc-----------------------attgatggatatttgggttgttttcagtttttggctattacacat s panTro5.chr4 192806337 84 + 194502333 tt-tttggtgttgtgtggtatttcattcaattgttagacc-----------------------attgatggatatttgggttgttttcagtttttggctattacacat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192690836 84 + 195804263 tt-tttggtgttgtgtggtatttcattgaatggttagacc-----------------------attgatggatatttgggttgttttcagtttttggctattacacat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3728272 84 + 4876863 tt-tttggtgttgtgtggtatttcattgaatggttagacc-----------------------attgatggatatttggcttgttttcagtttttggctattacacat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112612751 84 + 115148730 tt-tttggtgttgtgtggtatttcattgaatggttagacc-----------------------attgatggatatttgggttgttttcagtttttggctattacaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188897760 83 + 190429646 ttctttggtgttgtgtggtattgcattgaatggttagacc-----------------------attgatggatatttgggttgtttt--gtttttggctattacaaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187845191 83 + 189454096 ttctttggtgttgtgtggtattgcattgaatggttagacc-----------------------attgatggatatttgggttgtttt--gtttttggctattacaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24226338 83 - 25927173 ttctttggtgttgtgtggtattgcattgaatggttagacc-----------------------attgatggatatttgggttgtttt--gtttttggctattacaaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3260741 83 + 4669795 ttctttggtgttgtgtggtattgcattgaatggttagacc-----------------------attgatggatatttgggttgtttt--gtttttggctattacaaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134217940 79 + 135778131 ttttttggtggtgt------ttgcattgaatggttagacc-----------------------attgatggatatttgggttgttttcggtttttggctattacaaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2648502 85 - 2847728 ttctttggtgttgtgtggtattgcattgaatggttagacc-----------------------attgatggatatttgggttgttttcagtttttggctattacaaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 780379 85 + 2368649 ttttttggtgttgtgtggtattgcattgaatggttagacc-----------------------atttatggatatttgggttgttttcggtttttggctattacaaat i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16851058 107 - 59632846 tt-tttattgttgagtggtatttcattgtatgtcaataccacagtttgtttagccattaattgattcatggatacttgaattgtttccagttttccactattacaaat i canFam3.chr16 I 222 I 164 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=3029512.000000 s hg38.chr4_KI270789v1_alt 14206 515 + 205944 aaggctgctatgaatgtttatatacaagcttttatgtggacagggattttaatatttattgggtaatacttagaaatggaacagctggtaggtatatggtaggtttacatcgaacttaaaaagctgtcaaaatgttttccaaagtggcagtgccacctcacattcccatcagcagtatatgagaatgtatattacaccacatcctctccagcacttgtatggtc---------agtttaaaaaacacttgtatagtc-taataggtgcatggtggtagttcattgtggttttaatttgcacttcttttgtgaccaaagatgtatagca------------ttgtttgtcattgatagatcttctgtggtaaagtccctattcacagctttggaccatgatttcaattgggt---tttttgtttttttt-catattattgaaatttaggagccattcatatattt-tgggtccatctcctatatcagatatataattttcaaatttttttcagtctgtggtttatattttaattttatttat----t s panTro5.chr4 192806421 516 + 194502333 aaggctgctatgaatgtttatatacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggaacagctggtaggtatatggtaggtttacatcgaacttaaaaagctgtcaaaatgttttccaaagtggcagtgccacctcacattcccatcagcagtatatgagaatgtatattacaccacatcctctccagcacttgtatggtc---------agtttaaaaaacacttgtatagtc-taataggtccatggtggtagttcattgtggttttaatttgcacttcttttgtgaccaaagatgtatagca------------ttgtttgtcattgatagatcttctgtggtaaactccctattcacagctttggaccatgatttcaattgggt---tttttgtttttttttcatattattgaaatttaggagccattcatatattt-tgggtccatctcctatattagatatataattttcaaatttttttcagtctgtggtttatattttaattttatttat----t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192690920 515 + 195804263 aaggctgctatgaatgtttatatacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggagcagctggtaggtatatggtaggtttacatcgagcttaaaaagctgtcaaaatgttttccaaagtggcagtgccacctcacattcccatcagcagtatatgagaatgtatattacaccacatcctctccagcacttgtatggtc---------agtttaaaaaccacttgtatagtc-taataggtgcatggtggtagttcattgtggttttaatttgcacttcttttgtgaccaaagatgtatagca------------ttgtttgtcattgatagatcttctgtggtaaagtccctattcacagctttggaccatgatttcaattgggt---tttttgtttttttt-catattattgaaatttaggagccattcatatattt-tgggtccatctcctatatcagatatataattttcaaatttttttcagtctgtggtttatattttaattttatttat----t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3728356 513 + 4876863 aaggctgctaagaatgtttatagacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggaacagctggtaggtatatggtaggtttacatcgaacttaaaaagctgtcaaaatgttttccaaagtggcagtgccatctcacattcccatcagcagtatatgagaatgtatattacaccac-tcctctccagcacttgtatggtc---------agtttaaaaagcacttgtatagtc-taataggtgcatggtggtagttcattgtggttttaatttgcacttcttttgtgaccaaagatgtatagca------------ttgtttgtcattgatagatcttctgtggtaaagtccct-ttcacagctttggaccatgatttcaattgggt---tttttgtttttttt-catattattgaaatttaggagccattcatatattt-tgggtccatctcctatattagatatataattttcaaatttttttcagtctgtggtttatattttaattttatttat----t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112612835 511 + 115148730 aaggctgctatgaatgtttatatacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggaacagctggtaggtatgtggtaggtttacatcgaacttaaaaagctgtcaaaatgttttccaaagtggcactgccatctcacattcccatcagcagtatatgagaatgtatattacaccacatcctctccagcacttgtatggtc---------agtttaaaaagcacttgtatagtc-taatagctgcatggtggtagttcattgtggttttaatttgcacttcttttgtgaccaaagatgtatagca------------ttgtttgtcattgatagatcttctgtggtaaagtcactattcacaactttggaccatgatttcaattgggg---tttt--tttttttc-catattattgaaatttaggagccattcatatattt-tgggtccatctcctatatcagatatataattttcaaatttttttcagtctgt--tttatattttaattttatttat----t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188897843 518 + 190429646 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggcgttttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccatcagcagtatatgtgaatgcatatcacaccacatcctctccagcacttgcatggtc---------agtttaaaaaacactcatatagtc-taacaggtgaatggtggtaattccttgtagttttaatttgcacttcttttgtgaccaaatacgtatagca------------ttttttgtcattcatagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttgttttttttttctttt-cgtattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatattttaattttatttaa----t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187845274 518 + 189454096 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggcgttttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccatcagcagtatatgcgaatgcatatcacaccacatcctctccagcacttgcatggtc---------agtttaaaaaacactcatatagtc-taacaggtgaatggtggtaattccttgtagttttaatttgcacttcttttgtgaccaaatacgtatagca------------ttttttgtcattcatagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttgttttttttttctttt-cgtattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatattttaattttattTAA----T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24226421 517 - 25927173 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggtgttttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccatcagcagtatatgcgaatgcatatcacaccacatcctctccagcacttgcatggtc---------agtttaaaaaacactcatatagtc-taacaggtgaatggtggtaattccttgtagttttaatttgcacttcttttgtgaccaaatacgtatagca------------ttttttgtcattcatagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttg-tttttttttctttt-cgtattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatattttaattttatttaa----t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3260824 517 + 4669795 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaagtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccatcagcagtatatgcgaatgcatatcacaccacatcctctccagcacttgcatggtc---------agtttaaaaaacactcatatagtcttaacaggtgaatggtggtaattccttgtagttttaatttgcacttcttttgtgaccaaatacgtatagca------------ttttttgtcattcatagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttggtttttttt--tttt-cgtattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatattttaattttattTAA----T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134218019 515 + 135778131 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggcattttactatttattgggtaatacttagaaatggagcagttggtaggtacatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtaccatcttacattcccatcagcagtatatgcgaatgtatatcacaccacatcctctccagcacttgtatggtc---------agtttaaaaaacactcgtatagtc-taacaggtgcgtggtggtaattccttgtggttttaatttgcacttcttttgtgaccaaagacgtatagca------------ttttttgtcattcgtagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaactggg-------ttgtttttctt-catattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatatttaaattttatttatTTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2648587 503 - 2847728 aaggctgctatgaatgtttatgtacaagcttttatgtggacaggcattttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccattagcagtatatacgaatgcatatcacaccacatcctctccagcacttgcatggtc---------agtttaaaaaacactcatatagtc-taacaggtgaatggtggtaattccttgtagttttaatttgcacttcttttgtgaccaaatatgtatagca------------ttttttgtcattcatagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttt-tttttttttttttt-cgtattattgaaatttaggagctattcatatattc-tgggtccatctcctatatcatatatataattttcaaaatgttttcagtctgtggtttatatt------------------t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 780464 503 + 2368649 aaggctgctatgagtgtttatgtacaagctttt--------aggcattttaatatttattgggtaatacttagaaatggagcagttggtaggtatatggtaggtatacatcaaacttaaaaagctgtcaaaatgttttccaaagtggctgtgccatcttacattcccatcagcagtatatgcgaatgtatattacatcacatcctctccagcacttgtatggtc---------agtttaaaaaacactcgtatagtc-taacaggtgcatggaggtaattccttgtggttttaatttgcacttcttttgtgaccaaagacgtataaca------------ttttttgtcattcgtagatcttctgtggtaaagtccatattcaaaacttttgaccatgatttcaattgggttg-------tttttttt-cgtattattgaaatttaggagctattcacatattc-tgggtccatctcttatatcatatatataattttcaaaatgttttcagtctgtggtttatattttaattttatttat----t i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16851329 516 - 59632846 aaagctgatgtgaatgttcatttgtaagtttttacgtggacatgaattttagtttcccttggggaatacttaggaatgcaacagttggaa--catatggtagaaatacatcaaattaaagaaactggcaaaatgtttttcaaggtggcattgctattttacattcctgtcaacagtgtatgagaattccagttgctccatatcctttccaatacttgcattgtctttttttttttttttttttctatttggacattc-taatatatgtgtaatggtagctcattgtggttttaataggcatttcatcagtgaccaaaaatgtttagcatttttcatgattttttttgttattcataaatattgtttggtgaaatatatattcagaagtttcaccaatgatttaaatta----------------tttt-c---ttattgaggtgtgggattt-ttcagatattcttgtgtataaatccttcatcagatatgtgattttcaagatgtttccagtctgtggtt--tgtcttaactgtgtcttt----t i canFam3.chr16 I 164 I 4429 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1802318.000000 s hg38.chr4_KI270789v1_alt 14721 308 + 205944 taattaatttttggtggggggagacagggtcttgctttgtcacccaggcaggagtgcagtggtgtgatcacaactcaccgaagcctcaacctcccaggctcaggtgatcctcccacctcagcctcccgagtaactgggacc---------------tatgcctgcatggctaatgttattattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacacttgggctcaaatgagtctcctaccacggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat s panTro5.chr4 192806937 323 + 194502333 taattaatttttggtggggggagacagggtcttgctttgtcacccaggcaggagtgcagtggtgtgatcacaactcaccgaagcctcaacctctcaggctcaggtgatcctcccacctcagcctcccgagtaactgggaccacaggttcacaccactatgcctgcatggctaatgttattattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacacttgggctcaaatgagtctcctaccacggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192691435 324 + 195804263 taattaattgttggtggggggagacagggtcttgctttgtcacccaggcaggagtgcagtggtgtgatcacaactcaccgaagcctcaacctcccaggctcaggtgatcctcccacctcagccttccgagtaactgggaccacaggtccacaccactatgcctgcatggctaatgttattattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacacttgggctcaaatgagtctcctaccacggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaattaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3728869 323 + 4876863 taattaatttttggtggggggagacggggtcttgctttgtcacccaggcaggagtgcagtggtgtgatcacaactcaccgaagcctcaacctcccaggctcaggtgatcctcccaccttagcctcccgagtaactgggaccacaggtccacaccactatgcctgcatggctaatgttattattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacacctgggctcaaatgagtctcctaccacggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112613346 310 + 115148730 taattaatttttggtggggggagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcactgaagcctcaacctcccgggctcaggtgatcctcccacctcagcctcccgagcaactgggaccgcaggttcacgtcactatgcctgcatggctaatgttattattttttgtag-------------ttatgttgctcaggttggtc-ttcaacacttgggctcaaatgagtctcttaccacagcctcccaaagtgctgggattacaaattttagccactgtgcctggccttaattttcttaa-taat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188898361 322 + 190429646 taatt-ttttttggggggggtagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcatggaagcctcaacctcctgagctcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacgcttgggctcaaatgagtctcctaccatggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i rheMac8.chr5 C 0 I 6 s macFas5.chr5 187845792 322 + 189454096 TAATT-TTTTTTGGGGGGGGTagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcatggaagcctcaacctcctgagctcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacgcttgggctcaaatgagtctcctaccatggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24226938 322 - 25927173 taatt-tttttgggggggggtagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcatggaagtctcaacctcctgagctcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacgcttgggctcaaatgagtctcctaccatggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i macNem1.NW_012013133v1 C 0 I 6 s cerAty1.NW_012001672v1 3261341 322 + 4669795 TAATT-TTTTTGGGGGGGAGTagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcacggaagcctcaacctcctgagctcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacgcttgggctcaaatgagtctcctaccatggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i cerAty1.NW_012001672v1 C 0 I 6 s chlSab2.chr7 134218534 323 + 135778131 TAATT-TTTTTTGGGGGGGGTagacagggtcttgctttgtcacccaggttggagtgcagtggtgtgatcacaactcacggaagcctcaacctcctgaactcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtctttcaactcttgggctctaatgagtctcctaccatagcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i chlSab2.chr7 C 0 I 6 s manLeu1.NW_012102221v1 2649090 320 - 2847728 taatt-ttttt--gggggggtagacagggtcttgctttgtcacccaggctggagtgcagtggtgtgatcacaactcatggaagcctcaacctcctgagctcaagtgatcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacgcctgcatggctgatgttattgttttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaacgcttgggctcaaatgagtctcctaccatggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i manLeu1.NW_012102221v1 C 0 I 6 s colAng1.NW_012116221v1 780967 322 + 2368649 taatt-attttttttgggggtagacagggtcttgctttgtcacccaggctggagtacactggtgtgatcacaactcaccgaagcctcaacctcctgagctcaagtggtcctcccacctcagcctcctgagtagctgggaccacaggttcacaccaccacacctgcatggctgatgttgttattttttgtagagacagggtctcactatgttgctcaggttggtc-ttcaactcttgggctcaaatgagtctcctaccgtggcctcccaaagtgctgggattacaaatttgagccactgtgcctggccttaattttcttaa-taat i colAng1.NW_012116221v1 C 0 I 6 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16851845 4429 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=4070.000000 s hg38.chr4_KI270789v1_alt 15029 6 + 205944 --ttttat s panTro5.chr4 192807260 6 + 194502333 --ttttat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192691759 6 + 195804263 --ttttat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3729192 6 + 4876863 --ttttat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112613656 6 + 115148730 --ttttat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187846114 6 + 189454096 gtcttt-- i macFas5.chr5 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16851845 4429 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 781289 6 + 2368649 I e manLeu1.NW_012102221v1 2649410 6 - 2847728 I e chlSab2.chr7 134218857 6 + 135778131 I e cerAty1.NW_012001672v1 3261663 6 + 4669795 I e macNem1.NW_012013133v1 24227260 6 - 25927173 I e rheMac8.chr5 188898683 6 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=251567.000000 s hg38.chr4_KI270789v1_alt 15035 292 + 205944 ttttatgtttttgtttgagatggggtctcactctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctccgcctcccgggttcaggccattctcctgcctcagcc-------tagctgggact-caggtgcccgccactatgcttggctaattttgtttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtcttggcctcccaaagtgctgagattacaggtgtgaaccaccgtgcccggc s panTro5.chr4 192807266 292 + 194502333 ttttatttttttgtttgagatggggtctcactctgtcgcccaggctggagtgcagtggtgtgatctcagctcactgcaagctccgcctcccgagttcaggccattctcctgcctcagcc-------tagctgggact-caggtgcccgccactatgcttggctaattttgtttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccacccgtctcggcctcccaaagtgctgagattacaggcgtgaacccccgtgcccggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192691765 291 + 195804263 ttttat-tttttgtttgagatggggtctcactctgtcgcccaggctggagtgcagtggtgtgatctcggctcactgcaagctccgcctcccgggttcaggccattctcctgcctcagcc-------tagctgggact-caggtgcctgccactacgcttggctaattttgtttttgtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgaaccaccgtgcccggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3729198 291 + 4876863 ttttatttttttgtttgagatggggtctcactcagtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcccgggttcaggccattctcctgcctcagcc-------tagctgggact-caggtgcccgccactacgcttggctaattttgttttcgtatttttagtacagacggggtttcactgtgttagccaggatggtctcgatctcctga-gtcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgacccaccgtgcccggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112613662 300 + 115148730 ttttatttttttgtttgagatggggtctcactctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccgcctcctgggttcaggccattctcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccacgcttggctaattttgtttttgtatttttagtagagacggggtttcactatggtagccaggatggtctggttctcctgacctcgtgatctgcccgccttggcctcccaaagtgctgggattataggcgtgagccactgcgcccggc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16851845 4429 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e colAng1.NW_012116221v1 781289 6 + 2368649 I e manLeu1.NW_012102221v1 2649410 6 - 2847728 I e chlSab2.chr7 134218857 6 + 135778131 I e cerAty1.NW_012001672v1 3261663 6 + 4669795 I e macNem1.NW_012013133v1 24227260 6 - 25927173 I e macFas5.chr5 187846120 0 + 189454096 C e rheMac8.chr5 188898683 6 + 190429646 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=563391.000000 s hg38.chr4_KI270789v1_alt 15327 99 + 205944 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttcttttatggctcatcattttgtcatctgtaagatattgttaccttatct s panTro5.chr4 192807558 99 + 194502333 tgaagagtaggagttttatgttttgttaaagtacaatttattactactttcttttatggcttatcattttgtcatctgtaagctattgttaccttatct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192692056 99 + 195804263 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttcttttatggctcatcattttgtcatctgtaagatattgttaccttatct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3729489 99 + 4876863 tgaagagcaggagttttatgttttgttaaagtacaatgtattactactttcttttatggctcatgattttgtcatctgtaagatattgttaccttatct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112613962 99 + 115148730 tgaggagcaggagttttatgttttgttgaagtacaatttattactactttcttttatggtttatcattttgtcatctgtcagatattgttaccttatct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188898689 98 + 190429646 tgaagagcaggagttttatgttttgttaaagtacaatttactactactttc-tttacggctcatcattttgtcatctgtaagatattgttaccttatcc i rheMac8.chr5 I 6 C 0 s macFas5.chr5 187846120 98 + 189454096 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttc-tttacggctcatcattttgtcatctgtaagatattgttaccttatcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24227266 98 - 25927173 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttc-tttacggctcatcattttgtcatctgtaagatattgttaccttatcc i macNem1.NW_012013133v1 I 6 C 0 s cerAty1.NW_012001672v1 3261669 99 + 4669795 tgaagagcaggagttttacgttttgttaaagtacaatttattactactgtcttttatggctcatcattttgtcatctgtaagatattgttaccttatcc i cerAty1.NW_012001672v1 I 6 C 0 s chlSab2.chr7 134218863 99 + 135778131 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttcttttatggctcatcattttgccatctgtaagatattgttaccttatcc i chlSab2.chr7 I 6 C 0 s manLeu1.NW_012102221v1 2649416 99 - 2847728 tgaagagcaggagttttacgttttgttaaagtgcaatttattactactttcttttatggctcatcattttgtcatctgtaagatattgttaccttatcc i manLeu1.NW_012102221v1 I 6 C 0 s colAng1.NW_012116221v1 781295 99 + 2368649 tgaagagcaggagttttatgttttgttaaagtacaatttattactactttcttttatggctcatcattttgtcatctgtaagatattgttaccttatcc i colAng1.NW_012116221v1 I 6 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16851845 4429 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1460647.000000 s hg38.chr4_KI270789v1_alt 15426 250 + 205944 aagatcaccgaggtttttttttt--cttttg-tttttctggaattt-ttaAGGGATTTGGCTTAGTCTCCTGGAGATGGAGTGAGAACAAAGATCCTAGAGAAATAGTGAT-GGAGTTATATTTGGGTGAGGCTGCAAAGAAGATTGGTGTGGGGTTCTGGAAAGAGCAGGGGTCTTTTTCAAAATGATCATAAgcagtactctggggatgtgtgaaaaactcagaaagaattcctttgactacttggtgctgtt s panTro5.chr4 192807657 251 + 194502333 aagatcaccgaggtttttttttt-tcttttg-ttttTCTGGAATTT-TTAAGGGATTTGGCTTAGTCTCCTGGAGATGGAGTGAGAACAAAGATCCTAGAGAAATAGTGAT-GGAGTTATATTTGGGTGAGGCTGCAAAGAAGATTGGTGTGGGGTTCTGGAAAGAGCAGGGGTCTTTTTCAAAATGATCATGAgcagtactctggggatgtgtgaaaaactcagaaagaattcctttgactacttggtgctgtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192692155 250 + 195804263 cagatcaccgaggcttttttttt--cttttg-tttttctggaattt-ttaAGGGATTTGGCTTAGTCTCCTGGAGATGGAGTGAGAACAAAGATCCTAGAGAAATAGTGAT-GGAGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTGTGGGGTTCTGGAAAGAGCAGGGGTCTTTTTCAAAATGATCATGAGCAGTACTCTGGGGATGTGTGAACAACTCAGAAAGAATTCCTTTGACTACTTGGTACTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3729588 252 + 4876863 cagatcaccgaggttttttttttttcttttg-ttttTCTGGAATTT-TTAAGGGATTTGGCTTAGTCTCCTGGAGATGGAGTGAGAACAAAGATCCTAGAGAAATAGTGAT-GGAGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTGTGGGGTTCTGGAAAGAGCAGGGGTCTTTTTCAAAATGATCATGAgcagtactctggggatgtgtgaacaactcagaaagaattcctttgactacttggtgctgtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614061 249 + 115148730 aagatcaccgaggttttttttt---cttttg-tttttctggaagtt-ttaAGGGATTTGGCTTAGTCTCCTGGAGATGGAGTGAGAACAAAGATCCTAGAGAAATAGTGAT-GGAGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTCAGGGGTTCTGGAAAGAGCAGGGGTCTTTTTCAAAATGATCATGAGCAGTACTCTGGGCTTGTGTGAACAACTCAGAAAGAATTCTTTTGACCACTTGGTGCTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188898787 250 + 190429646 aagatcaccgaggtttgtttttt-tcttttt-ttttcctggaattt-tTAAGGGATTTGGCTTAGTCTTCGGGAGGTGGAGGGAGAACGAAGATCCTAGAGAAATATTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTG-GGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGCGGTACTctggggatgtgtgaacaactcagaaggaattcctttgaccacttggtgctgtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187846218 250 + 189454096 aagatcaccgaggtttgtttttt-tcttttt-ttttCCTGGAATTT-TTAAGGGATTTGGCTTAGTCTTCGGGAGGTGGAGGGAGAACGAAGATCCTAGAGAAATAGTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTG-GGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGCGGTACTCTGGGGATGTGTGAACAACTCAGAAGGAATTCCTTTGACCACTTGGTGCTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24227364 250 - 25927173 aagatcactgaggtttgtttttt-tcttttt-ttttcctggaattt-tTAAGGGATTTGGCTTAGTCTTCGGGAGGTGGAGGGAGAACGAAGATCCTAGAGAAATAGTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTG-GGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGCGGTACTctggggatgtgtgaacaactcagaaggaattcctttgaccacttggtgctgtt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3261768 252 + 4669795 aagatcaccgaggtttgtttttt-tctttttcttttcctggaattt-ttaAGGGATTTGGCTTAGTCTTCTGGAGGTGGAGGAAGAACAAAGATCCTAGAGAAATAGTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTGAGGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGCGGTACTCTGGGGATGTGTGAATAACTCAGAAGGAATTCCTTTGACCACTTGGTGCTGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134218962 250 + 135778131 aagatcaccgaagtt--tttttt-ttctttttttttcctggaattt-ttaAGGGATTTGGCTTAGTCCTCTGGAGGTGGAGGGAGAACAAAGATCCTAGAGAAATAGTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAAATTGGTGAGGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGTGGTACTCTGGGGATGTGTGAACAACTCAGAAGGAATTCCTTTGACCACTTGGTGCTGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2649515 252 - 2847728 aagatcaccgaggtttgtttttt-tctttttcttttcctggaattt-ttaAGGGATTTGGCTTAGTCTTCTGGAGGTGGAGGAAGAACAAAGATCCTAGAGAAATAGTGAT-GGGGTTATATTTGGCTGAGGCTGCAAAGAAGATTGGTGAGGGGTTCTGGAAAGATCAGAGGTCTTTTTCAAAATGATCATCAgcagtactctggggatgtgtgaataactcagaaggaattcctttgaccacttggtgctgtt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 781394 250 + 2368649 aagatcaccgaggtttttttttc-ttttttt-ctTCTCTGGAATTT-TTAAGGGATTTGGCTTAGTCTTCTGGAGGTGGAGGGAGAACAAAGACCCTAGAGAAATAGTGAT-GGGGTTATATTTGACTGAGGCTGCAAAGAAGATTGGTG-GGGGTTCTGGAAAGATCAGGGGTCTTTTTCAAAATGATCATCAGCAGTACTCTGGGGATGTGTGAACAACTCAGAAGGAATTCCTTGGACCACTTGGTGCTGTT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16856274 240 - 59632846 aaagttacttgtgcctcttttct--gtttta-caagcctaaaactgattaagggtttcagtttagtgtcctgtaagaggatgtaga---gagatcattgaaagCTAATGGTAGAGGTCATATTTGACTGAGGCTTCATAGGAGAGAGATG-GTG-----GGAGAAAAGAGGGATCTTTTTCAAAATAACCACCATCAGTACTCTTTGGATGCATCAAGAACTC---AAGGATGCCTTTGTCCACTTGGTGCTATT i canFam3.chr16 I 4429 I 5 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1645653.000000 s hg38.chr4_KI270789v1_alt 15676 319 + 205944 taagaggctactactggccgggcccagtggctcatgcctgtaatcctagcactttgcggggctgaggcgtgcagatcacctgaggtcaggagtacaagatcatcctggccaacatggtgaaaccctgtctctactaaaaatac-aaaaaaattacctgggcatggtggcgcacacc--tgtaatttcagctactcggaggctgag---acaagataaattacttgaacccgggaggcagaggttgcagtgagctgagatcgtgacactgccctccatcctggagatcgagactctgcctttaa--------aaaaaaaaaaaaaaaaaaaagt s panTro5.chr4 192807908 315 + 194502333 taagaggctactactggccgggcccagtggctcatgcctgtaatcctagcactttgcggggctgaggcgtgcagatcacctgaggtcaggagtacaagatcatcctggccaacatggtgaaaccctgtctctactaaaaatac-aaaaaaattacctgggcatggtggcgcacacc--tgtaatttcagctactcggaggctgag---acaacataa-ttacttgaacccgggaggcagaggttgcagtgagctgagatcgcgacactgccctccatcctggagagcgagactctgcctttaa--------aaaaaaaaaaaaaaaaa---gt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192692405 319 + 195804263 TAAGAGGCTACTACTggccgggcccagtggctcatgcctgtaatcctagcactttggggggctgaggtgtgcagatcacctgaggtcaggagttcaagatcatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaaaattacctgggcatggtggtgcacacc--tgtaatttcagctactcagaggctgag---acaacataa-ttacttgaacccgggaggcagaggttgcagtgagctgagatcgcgacactgccctccatcctggagagcgagactctgcctttaa--------aaaaaaaaaaaaaaaaaaaaGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3729840 320 + 4876863 taagaggctactactggccgggcccagtggctcatgcctgtaatcctagcactttgcggggctgaggcgtgcagatcacctgaggtcaggagttcaagatcatcctggccaacatggtgaaaccctgtctctactaaaaatac-aaaaaaattacctgggcatggtggtgcacacc--tgtaatttcagctactcggaggctgaaattacaagataaattacttgaacccgggaggcagaggttgcagtgagctgagattgcgacactgccctccatcctggagagcgagactctgcctttaa--------aaaaaaaaaaaaaaaaa--agt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614310 317 + 115148730 TAAGAGGCTACTACTggccaggcgcagtggctcgtgcctgtaatcccagcactttggggggctgaggtgtgtagatcacctgaggtcaggagttcaagatcatcttggccaacatggtgaaaccctgtctctactaaaaatac-aaaaaaattacctgggcatggtggcgcacacc--tgtaatttcagctactcggaggctgag---acaagataa-ttacttgaacccgggaggcagaggttgcagtgagctgagatcgcgacactgccctccatcctggggagggagactctgcctttaa--------aaaaaaaaaaaaaaaaa-TAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899037 325 + 190429646 taagaggctacaactggctgggtgcagtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggatttcgagatcatcctggccaacatggcaaaaccctg--tctactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcccagctacttggaggctgag---acaggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaagactctgcctcaaaaaacaaacaaacaaacaaacaaaaa-aaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187846468 321 + 189454096 TAAGAGGCTACAACTggctgggtgcagtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggatttcgagatcatcctggccaacatggcaaaaccctg--tctactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcccagctacttggaggctgag---acaggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaagactctgcctcaaa----aaacaaacaaacaaacaaaaa-aaGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24227614 321 - 25927173 taagaggctacaactggctgggtgcagtggctcaggcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggatttcgagatcatcctggccaacacggcaaaaccctg--tctactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcccagctacttggaggctgag---acaggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaagactctgcctcaaa----aaacaaacaaacaaacaaaaa-aaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262020 325 + 4669795 TAAGAGGCTACAACTggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcggatcacttgaggtcaggattttgagatcatcctggccaacatggtaaaaccctg--tctactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcccagctacttggaggctgag---ataggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaagactctgcctcaaaaaacaaacaaacaaacaaacaaaaa-aaGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219212 317 + 135778131 TTAGAGGCTATAACTggctgggtgcagtggcttatgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggatttcgagatcatcctggccaacatggtaaaaccctg--tccactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcctagctactcggaggctgag---acaggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaaggctctgcctcaaa--------aaacaaacaaacaaaaa-aaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2649767 321 - 2847728 taagaggctacaactggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcggatcacttgaggtcaggattttgagatcatcctggccaacatggtaaaaccctg--tctactaaaaatac-agaaaaattacctggacatggtggcacacacctgtgtaatcccagctacttggaggctgag---acaggagaa-ttacttgaacccgggaggcagaggttgcagtgagctgaggtcgtgacactgcactccatcctggagagcaagactctgcctcaaa----aaacaaacaaacaaacaaaaa-aaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 781644 322 + 2368649 TAAGAGGCTACTACTggctgggtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggagggcggatcacctgaggtcaggatttcgcgatcatcctggccaacatggtaaaaccctg--tctactaaaaatac-ag-aaaattacctggacgtagtggcacacacc--tgtaatcccagctactcggaggctgag---acaggagaa-ttacttgaatccgggaggcagaggttgcagtgagctgaggtcacgacactgcactccatcctggagagcaagactctgcctcaaaaaaCAACCAACCAACCAACCAAAAA-AAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e canFam3.chr16 16856514 5 - 59632846 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=42298.000000 s hg38.chr4_KI270789v1_alt 15995 8 + 205944 ggctactc s panTro5.chr4 192808223 8 + 194502333 ggctactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192692724 8 + 195804263 GGCTACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730160 8 + 4876863 ggctactc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614627 7 + 115148730 GGCCACT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899362 8 + 190429646 ggctacta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187846789 8 + 189454096 GGCTACTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24227935 8 - 25927173 ggctacta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262345 8 + 4669795 GGCTACTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219529 8 + 135778131 aGCTACTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650088 8 - 2847728 ggctacta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 781966 8 + 2368649 GGCTACTA i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16856519 8 - 59632846 GGCTACTC i canFam3.chr16 I 5 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1340336 3700 - 2520184 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1849992.000000 s hg38.chr4_KI270789v1_alt 16003 306 + 205944 ccaaggcctagccat---tttcggttcccaaagatctatggaaatg-------gcagaactggcaacctttaaggaatcacaaaggctaagaaaacaaacatctcagtcttagttacttaactagcacgaactcagatctgaggatga--ggggcctccctgatgggcaggaacttggtttgatcatagagtgccaagaatgagctagaatatcctgctagctttgcaatacgcaaacttggtgccaggttaatgcagaattaatttaaagaaaataacaaaatgcaatatctttcatacctCGTAGTTACAATATTA s panTro5.chr4 192808231 306 + 194502333 ccaaggcctaggcat---tttcagttcccaaagatctatggaaatg-------gcagaactggcaacctttaaggaatcacaaaggctaagacaacaaacatctcagtcttagttacttaactagcacgaactcagatctgaggatga--ggggcctccctgatgggtaggaacttggtttgatcatagagtcccaagaatgagctagaatatcctgctagctttgcaatatgcaaacttggtgccaggttaatgcagaattaatttaaagaaaataacaaaatgcaatatctttcatacctCGTAGTTACAATATTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192692732 306 + 195804263 CCAAGGCCTAGGCAT---TTTCAGTTCCCAAAGATCTatggaaatg-------gcagaactggcaacctttaaggaatcacaaaggctaagacaacaaacatctcagtcttagttacttaactagcacgaactcagatctgaggatga--ggggcctccctgatgggcaggaacttggtttgatcatagagtcccaagaatgagctagaatatcctgctagctttgcaatatgcaaacttggtgccaggttaatgcagaattaatttaaagaaaataacaaaatgcaatatctttcatacctCATAGTTACAATATTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730168 306 + 4876863 ccaaggcctagtcat---tttcagttccgaaagatctatggaagtg-------gcagaactggcaacctttaaggaatcacaaaggctaagaaaacaaacatctcagtcttagttacttaactagcacgaactcagatctgaggatga--ggggcctcccggatgggcaggaacttggtttgatcatagagccccaagaatgagctagaatatcctgctagctttgcaatatgcaaacttggtgccaggttaatgcagaattaatttaaagaaaacaagaaaatgcaatatctttcgtacCTCGTAGTTACAATATTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614634 299 + 115148730 CCGAGGCCTAGCCAT---GTTCAGTTCCCAGAGATCTatggaaatg-------gcagagctggcagcctttaaggagtcacaaaggctaagacaacaaacatctcagtcttagttccttaact-gcacgaac------ctgaggatga--ggggcctccctgatgGGCAGGAACTTAGTTTGATGATAgagccccaagaatgagctagaatgtcctgctagctttgcaatatgcaaacttggtgccaggttaatgcagaattcatttaaagaaaacaagaaaatgcagtatctttcgtacCTCGTAGTTACAGTATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899370 310 + 190429646 tcaaggcctagccat---tttcagttcccagagatacagggaaatg---gca-gcagaactggccacttttaaggaatcacaaaggctaagccaacaaacatctcagtcttagttacttaactagcatgaactcagatctgaagatga-gggggcctccctgatgggcaggaacttggtttgatcatagaaccccaagaatgagctagaatttcctgctagctttgcaatatgtaaacttggtgccaagttaatgcagaattaatttaaagaaaacaagaaaatgcaatatctttcatacctCGTAGTTGCAATATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187846797 310 + 189454096 TCAAGGCCTAGCCAT---TTTCAGTTCCCAGAGATACAGGGAAATG---GCA-GCAGAACTGGCCACTTTTAAGGAATCACAAAGGCTAAGCCAACAAACATCTCAGTCTTAGTTACTTAACTAGCATGAACTCAGATCTGAAGATGA-GGGGGCCTCCCTGATGGGCAGGAACTTGGTTTGATCATAGAACCCCAAGAATGAGCTAGAATTTCCTGCTAGCTTTGCAATATGTAAACTTGGTGCCAAGTTAATGCAGAATTAATTTAAAGAAAACAAGAAAATGCAATATCTTTCATACCTCGTAGTTGCAATATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24227943 310 - 25927173 tcaaggcctagccat---tttcagttcccagagatacagggaaatg---gca-gcagaactggccacttttaaggaatcacaaaggctaagccaacaaacatctcagtcttagttacttaactagcatgaactcagatctgaagatga-gggggcctccctgatgggcaggaacttggtttgatcatagaaccccaagaatgagctagaatttcctgctagctttgcaatatgtaaacttggtgccaagttaatgcagaattaatttaaagaaaacaagaaaatgcaatatctttcatacctCGTAGTTGCAATATTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262353 310 + 4669795 TCAAGGCCTAGCCAT---TTTCAGTTCCCAGAGATATATGGAAATG---gca-gcagaactggccacttttaaggaatcacaaaggctaagccaacaaacatctcagtcttagttacttaactagcatgaactcagatctgaagatga-gggggcctccctgatgggcaggaacttggtttgatcatagaaccccaagaatgagctagaatttcctgctagctttgcaatatgtaaacttggtgccaagttaatgcagaattaatttaaagaaaacaagaaaatgcgatatctttcatacctCGTAGTTGCAATATTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219537 305 + 135778131 TCAAGGCCTAGCCAT---TTTCAGTACCCAAAGATCTATGGAAATG---GCA-GCAGAACTGGCAACTTTTAAGGAATCACAAAGGCTAAGCCAACAAACATCTCAGTCTTAGTTACTTAACTAGCATGAACTCAGATCTGAGGATGA--GGGGCCTTCCTGATGGGGAGGAACTTGATTTGATCATAGAGTCCCAAGAATGAGCTAGAATTTCCTGCTAGCTTTGCAATATGTAAACTTGGTGCCAAGTTAATGCAG----AATTTAAAGAAAACAAGAAAATGCAATATCTTTCATACCTCGTAGTTGCAATATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650096 310 - 2847728 tcaaggcctagccat---tttcagttcccagagatatatggaaatg---gca-gcagaactggccacttttaaggaatcacaaaggctaagccaacaaacatctcagtcttagttacttaactagcatgaactcagatctgaagatga-gggggcctccctgatgggcaggaacttggtttgatcatagaaccccaagaatgagctagaatttcctgctagctttgcaatatgtaaacttggtgccaagttaatgcagaattaatttaaagaaaacaagaagatgcaatatctttcatacctCGTAGTTGCAATATTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 781974 309 + 2368649 TCAAGGCCTAGCCAT---TTTCAGTTCCCAGAGATCTatggaaatg---gca-gcagaactggcaacttttaaggaatcacaaaggctaagccaacaaacatctcagtcttagttccttaactagcatgaactcagatctgaggatga--ggggcctccctgatgggcaggaacttggtttgatcatagaaccccaagaatgagctagaatttcctgctagctttgcaatatgtaaacttggtgccaagttaatgcagaattaatttaaagaaaacaagaaaatgcaatatctttcatacctTGTAGTTGCAATATTA i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16856527 288 - 59632846 TGAAGGGCCGGGCAT---TCTCAGTTCCCAAAGGTTTATAGAAACT-----A-GCAGAACCAGTAGCCTATATGGGATTGCAAAGGCTAAAACAGAAAATATCTAAGTTTTAATCA--------GTGTAAACTGAAGTCTGA-GATGATAGTCACTTCCCTCACACTCAGAACATTGGTCTGATTAAGAAGTCTCAAGAAAGAACTAGATTTTCCCATTAACTTTGCAGTATGGAGA-TCGAAGCCAGATCAAAA-----------TAAAGAGAACAAGCCAATGAAATATCTCTTGTACTTCTGATTTTCAACACTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1344036 264 - 2520184 CCACTGCTGAGCCGTGCGTTCCAGCTCCCAAGGGCACCTCGAGGCGTGGGCATGCCGGAGTGGGAGCC--CGGAGAAGCACACACTCTGAGACAGCAGGCATCTCTGCCTTGATCC--------ATGTGAACTGAGTTCCCAGGACAA--GGGGGTCTCCTAGTACTCTGGACCTCAGCTTGGTGCTGGAGTGCCCAG-GTGGGCCAGGATTTCCCATCAACATTGCGCTACGGAGAGT---------------------------TAGAGGTGACAAGGCAGTGCAGTATCTCCTGAGTCTCT-------------- i dasNov3.JH570353 I 3700 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3873267 4402 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=444898.000000 s hg38.chr4_KI270789v1_alt 16309 62 + 205944 AAACTAATACACCACATACTATATAGATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC s panTro5.chr4 192808537 62 + 194502333 AAACTAATACACCACATACTATATAGATTAATTCCAAGTT--GCATAATTTCTTTATACCGTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693038 62 + 195804263 AAACTAATACACCACATACTATATAGATTAATTCCAAGTT--GCATAATTTCTTTATACCGTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730474 62 + 4876863 AAACTAATACACCACATACTATATAGATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614933 62 + 115148730 AAACCAATACACCACATACTATATAGATTAATTCCAAGTT--GCATAATTTCTTTATACCGTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899680 62 + 190429646 AAACTAATACACCATATATTATATAAGTTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847107 62 + 189454096 AAACTAATACACCATATATTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228253 62 - 25927173 AAACTAATACACCATATATTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262663 62 + 4669795 AAACTAATACACCATATATTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219842 61 + 135778131 AAACTAATACACCATATACTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATTC-GTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650406 62 - 2847728 AAACTAATACACCATATATTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782283 62 + 2368649 AAACTAATACACCATATACTATATAAATTAATTCCAAGTT--GCATAATTTCTTTATACTGTTC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3877669 62 + 3993831 AAACTAATAAACAACATACTATATGAATTAATTTCAAGTT--GCATAGTTTCTTTATATTGCTC i proCoq1.NW_012145301v1 I 4402 C 0 s canFam3.chr16 16856815 57 - 59632846 AAACTGAT-----CTGTAATATACAAATTAATTCCAAGTT--GTATAAATTCTCTATATTGTTC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1344300 55 - 2520184 ------GTACAGAAAGTTATATACAAATTACATACATGCTTGGGATAGTCCCCCCGTATTC--- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e mm10.chr8 86488840 5599 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=320649.000000 s hg38.chr4_KI270789v1_alt 16371 42 + 205944 TTCTCAGAATGGTAGT-CTAATCTAGGTCTATAATTCGTGCT-G s panTro5.chr4 192808599 42 + 194502333 TTCTCAGAATGGTAGT-CTAATCTAGGTCTATAATTCGTGCT-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693100 42 + 195804263 TTCTCAGAATGGTAGT-CTAATCTAGGTCTATAATTCGTGCT-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730536 42 + 4876863 TTCTCAGAATGGTAGT-CTAATCTAGGTCTATAATTTGTGCT-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112614995 42 + 115148730 TTCTCAGAATGGTAGT-CTAACCTAGGTCTATAATTTGTGCT-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899742 43 + 190429646 TTCTCAGAATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847169 43 + 189454096 TTCTCAGAATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228315 43 - 25927173 TTCTCAGAATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262725 43 + 4669795 TTCTCAGAATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219903 43 + 135778131 TTCTCAGAATGGTGGT-CTAATTTAGGTCTATAATTTGTGCTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650468 43 - 2847728 TTCTCAGAATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782345 43 + 2368649 TTCTCAGTATGGTGGT-CTAATCTAGGTCTATAATTTGTGCTGG i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3877731 42 + 3993831 TTCTTGGAATAGTGGT-CTAATCTAGGCCTGTAACTTGTGCT-G i proCoq1.NW_012145301v1 C 0 I 141 s mm10.chr8 86494439 42 - 129401213 TTCTTGAGATGGAGGT-CCAATCTAGTTTGATAATTTGTGCC-G i mm10.chr8 I 5599 C 0 s canFam3.chr16 16856873 43 - 59632846 TTTTTGGAATGGTGGTAAAAATCTAGGCATATAGTTTATGCT-G i canFam3.chr16 I 1 I 2 s dasNov3.JH570353 1344355 37 - 2520184 CTATTGGAATGGTGGC-ATGATGTAGGC--ATGATGGAAG---- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=1035859.000000 s hg38.chr4_KI270789v1_alt 16413 148 + 205944 ACCCACGGCAGTGACCTGAAAGAGTTGGCACTTTCAGATTTTGAATATGTTGTCTCAGAGCATTTTCTCTCCACCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCCGTGTCCGTCCCTGTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG s panTro5.chr4 192808641 147 + 194502333 ACCCAGGGCAGTGACCTGAAAAAGTTGGCACTTTCAGATTTTGAATATGTTGTCTCAGAGCATTTTATCTCCAGCTTTGCTAAGGACACGTCTCCC-TCAGCTTTCCGTGTCCGTCCCTGTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693142 148 + 195804263 ACCCAGGGCAGTGACCTGAAAAAGTTGGCACTTTCAGATTTTGAATATGTTGTCTCAGAGCATTTTCTCTCCACCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCCGTGTCCGTCCCTGTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730578 147 + 4876863 ACCCTGGGCAGTGACCTGAAAAAGTTGGCACTTTCAGATTTTGAATATGTTGTCTCAGAGCATTTTCTCTCCAGCTTTGCTAAGGACATGTCTCCCCTCAGCTTTCCGTGTCCGTCCCTG-TTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615037 148 + 115148730 AGCCAGGGCAGTGACCTGAAAAAGTTGGCACTTTCAGATTCTGAATATGTTGTCTCAGAGCATCTTCTCTCCAGCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCCGTGTCCGTCCCTGTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899785 148 + 190429646 ACCCCGGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTTAGAACATTTTCTCTCCAGCTTTGCTAAGGACACTTCTCCCCTCAGCTTTCAGTACCTGTCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847212 148 + 189454096 ACCCCGGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACTTCTCTCCTCAGCTTTCAGTACCCGTCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228358 148 - 25927173 ACCCCGGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACTTCTCCCCTCAGCTTTCAGTACCCGTCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262768 148 + 4669795 ACCCCGGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCAGTACCCATCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134219946 148 + 135778131 ACCCCGGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCAGTGCCCGTCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650511 148 - 2847728 ACCCCAGGCAGTGACCTGAAAAAGTTGGTACTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCAGTACCCGTACCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782388 148 + 2368649 ACCCCGGGCAGTGACCTGAAAAAGTTGGTGCTTTCAGATTTTGAATATGTTGTCTCAGAACATTTTCTCTCCAGCTTTGCTAAGGACACGTCTCCCCTCAGCTTTCAGTACCTGTCCCTCTTTC------------------AGGCA--AG-GTGAGTTAGGCTCACAG i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86494481 154 - 129401213 TCTTGAGGCAGAAATCTGTCAAAACTAGCACTTTC----TATGGAAA--CTGTCTCAAAATGTTTTCCATTCAGTTTTGTTAGAAACA----TCTTCTTTGGTTTCAGAAAGC-TCCTTGTTTTCTCAGAGCACAAGGGGTGAGGGA--AG-G-AAGGCAGATTTAGAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16856918 147 - 59632846 ATTGGGGGCAGTGACCTGGGA-AGTTGGCACTTTCAAAT--TGAATATGTTGTCTCAGGACATTTTCTCCTCATCTTTGCTAAAGACATGTCTTCCTTCAGCTTTCAAGGTGCATTTCTCTTTC------------------AGGCAAGAG-GTGAACTAAGTTCACCG i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1344392 147 - 2520184 GCTGGGGGCAGAGACTCCGAGAAGCTGGCCCTTTCATAT--TAAATAGGTTGGACCAGAACATTTTCTTTTCAACTTCCCTAAAGATGTGTCTTCCTGTAGCTTTCTGTGCTCTTCCCTCTTTC------------------AGGCA--AATGTGAACCAAAATCAGAG i dasNov3.JH570353 C 0 I 422 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3877773 141 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=110912.000000 s hg38.chr4_KI270789v1_alt 16561 19 + 205944 TGAGCTCCGCCAGCTGTGG s panTro5.chr4 192808788 19 + 194502333 TGAGCTCGGCCAGCTGTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693290 19 + 195804263 TGAGCTCCGCCAGCCGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730725 19 + 4876863 TGAGCTCCGCCAGCTGTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615185 19 + 115148730 TGAGCTCCGCCAGCTGTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899933 19 + 190429646 TGAGCTCCGCCAGCTGTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847360 19 + 189454096 TGAGCTCCGCCAGCTGTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228506 19 - 25927173 TGAGCTCCGCCAGCTGTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262916 19 + 4669795 TGAGCTCCACCAGCTGTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220094 19 + 135778131 TGAGCTCCACCAGCTGTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650659 19 - 2847728 TGAGCTCCGCCAGCTGTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782536 19 + 2368649 TGAGCTCCGCCAGCTGTGG i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86494635 16 - 129401213 TGAG---AAGAAATTAGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16857065 16 - 59632846 TGA---CCATGAGTTGTGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3877773 141 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e dasNov3.JH570353 1344539 422 - 2520184 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=703268.000000 s hg38.chr4_KI270789v1_alt 16580 114 + 205944 CTGTGTGTATT----TGTGTGTCTGTGTGTTGTAGTGGTAACAGCATCAGCAGTGTTTGTTGCAGATCAGCTAACTCTGGTAAGAAGTTTCAAAGCTGGTTGTTATTTACTTTTTCGC s panTro5.chr4 192808807 114 + 194502333 CTGTGTGTATT----TGTGTGTCTGTGTGTTGTAGTGGTAACAGCATCAGCAGTGTTTGTTGCAGATCAGCTAACTCTGGTAAGAAGTTTCAAAGCTGGTTGTTATTTACTTTTTCGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693309 114 + 195804263 CTGTGTGTATT----TATGTGTCTGTGTGTTGTAGTGGTAACAGCATCAGCAGTGTTTATTGCAGATCAGCTAACTCTGGTAAGAAGTTTCAAAGCTGGTTGTTATTTACTTTTTCGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730744 114 + 4876863 CTGTGTGTATT----CGTGTGTCTGTGTGTTGTAGTGGTAACAGCATCAGCAGTGTTTATTGCAGATCAGCTAACTCTGGTAAGAAGTTTCAAAGCTGGTTGTTATTTACTTTTTCGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615204 114 + 115148730 CTGTGTGTATT----TGTGGGTCTGCGTGTTGCAGTGGTGACAGCATCAGCAGTGTTTATTGCAGATCAGCTAACTCTGGTAAGAAGTTTCAAAGCTGGTCGTTATTTACTTTTTCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188899952 111 + 190429646 CTGGGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCATGTTTGTTGCAGATCAGCTAACTCTGGT---AAGTTTCGAAGGTGGTTGCTATTTACTTTTTCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847379 114 + 189454096 CTGGGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCATGTTTGTTGCAGATCAGCTAACTCTGGTAAGAAGTTTCGAAGGTGGCTGCTATTTACTTTTTCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228525 114 - 25927173 CTGGGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCATGTTTGTTGCAGATCAGCTAACTCTGGTAAGAAGTTTCGAAGGTGGTTGCTATTTACTTTTTCAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3262935 114 + 4669795 CTGGGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCGTGTTTATTGCAGATCAGCTAACTCTGGTAAGAAGTTTCGAAGGTGGTTGCTATTTACTTTTTCAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220113 114 + 135778131 CTGTGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCGTGTTTATGGCAGATCAGCTAACTCTGGTAAGAAGTTTTGAAGCTGGTTACTATTTACTTTTTCAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650678 114 - 2847728 CTGGGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCGTATTTACTGCAGATCAGCTAACTCTGGTAAGAAGTTTCGAAGGTGGTTGCTATTTACTTTTTCAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782555 114 + 2368649 CTGTGTGTATT----TGTGTGTCTGTGTGTTGTGGTGGTAGCAGCATCAGTCGTGTTTATTGCAGATCAGCTAACTCTGGTAAGAAGTTTCGAAGCTGATTGCTATTTACTTTTTCAC i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86494651 104 - 129401213 GTGTGTGCTTG----CATGAGACTGTGGAGAGTGCAAGGAATGAAGAAAAGGGTGTT-----CAACTC--TTGACTCAGGAGAGCA-TTTCAAAGGTGAGGGCTGTTTACCATCTG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16857081 117 - 59632846 GTGTGTGCGCGCGCACGCATGCATGTGAGTAGTTGTGGTGGTGGTGGTAGTGGTGTTTACTGCAGATTAATTGCCTCTGGTAAGTAGTTTCAAAGCTAGTGACTATTTATCTTCTTT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1344961 93 - 2520184 ctgtgtgcata----tgcatgtgtgcatgCTG--------------------GAGATAACTGAAGATTAGCTGAGTCTGGTGAGCAGTTTTCAACCTCGTTGCTATTTACCTTCTCT- i dasNov3.JH570353 I 422 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3877773 141 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161089 0 - 11315646 C a score=57270.000000 s hg38.chr4_KI270789v1_alt 16694 9 + 205944 TTTTTTTTT s panTro5.chr4 192808921 9 + 194502333 TTTTTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693423 8 + 195804263 -TTTTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730858 8 + 4876863 -TTTTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615318 9 + 115148730 TTTTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900063 8 + 190429646 -TTTTTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847493 8 + 189454096 -TTTTTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228639 8 - 25927173 -TTTTTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263049 8 + 4669795 -TTTTTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220227 8 + 135778131 -TTTTTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650792 8 - 2847728 -TTTTTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782669 8 + 2368649 -TTTTTTTC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161089 9 - 11315646 TCTTCTCTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86494755 9 - 129401213 TCTGCTCTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16857198 9 - 59632846 TTCTTTCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1345054 9 - 2520184 TCACCTTTC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3877773 141 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=1654513.000000 s hg38.chr4_KI270789v1_alt 16703 177 + 205944 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGCGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCCATTTTCTC-TTTTGATCAAATATCACTAT--ATTTCATACATATTTTTTCACAATTCGCAGTTTAGGATTGCAGCCACTTCTCGGTTT s panTro5.chr4 192808930 177 + 194502333 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGGTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATACATATTTTTTCACAATTCACAGTTTAGGATTGCAGCCACTTCTCAGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693431 177 + 195804263 TGTTCCACCTGATAATTTTCCAAATTAATTATTTATGCTGCAGAAAAATTATAATGGGGTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATACATATTTTTTCACAATTCGCAGTTTAGGATTGCAGCCACTTCTCAGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3730866 173 + 4876863 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGCGTTATGAAAGCAATTCTGTGCTGTATCAGCT----ATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATACATATTTTTTCACAATTCGCAGTTTAGGATTGCAGCCACTTCTCAGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615327 177 + 115148730 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAGTGGGTTATGAAAGCAATTCTGTGCTGTATTAGCTTTCTGTTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATATTTTTTCACAATTTACAGTTTAGGATTGGAGCCACTTCTCAGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900071 177 + 190429646 TGTTCCACCTGATAATTTTTCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTGT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847501 177 + 189454096 TGTTCCACCTGATAATTTTTCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228647 173 - 25927173 TGTTCCACCTGATAATTTTTCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAG----CTATTTTCTC-TTTTGATCAAATATCACTGT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263057 177 + 4669795 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTCGGATTGGAGCCACTTCTCAGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220235 177 + 135778131 TGTTCCACCTGACAATTTTCCAGCTTAATTATTTATGCTGCAGAAAAGTTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650800 177 - 2847728 TGTTCTACCTGATAATTTTCCAAGTTAATTAATTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATATTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782677 177 + 2368649 TGTTCCACCTGATAATTTTCCAAGTTAATTATTTATGCTGCAGAAAAATTATAATGGGTTATGAAAGCAATTCTGTGCTGTATCAGCTTTCTATTTTCTC-TTTTGATCAAATATCACTAT--ATTTAATAAATTTTTTTTCACAATTTGCAGTTTAGGATTGGAGCCACTTCTCAGTTT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3877914 177 + 3993831 TGTTTCACCTGAAAATTTTCTGAGTTAACTATTTATGCTGCAGAAAAATTAAAATGAGATATGCAAGCAACTTGTTGCTGTATCAACTTTCTATTTTCTC-TTTTGACTCAATTTCACTCT--ATACGATAAATATTGTTTCACAATTTGCAGTTTGGGATTCCAGCCACTTCTCAGTTT i proCoq1.NW_012145301v1 I 141 I 295 s otoGar3.GL873580 11161098 177 - 11315646 TGTTTCACCTGACAGTTCCATTATTTATTTA-TTATGCCGTAGAAAAATCAAAATGAGATATGCAAGCAACTCATTGCTGTATAAGCTTTCTGTTTTCTCTTTTTGACCAAATTTCACTAC--GGTGGATAAACATCACTCTACAGTTTGCAGTTTGAGATTGTAGCCTCCTCTCAGTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86494764 174 - 129401213 TGTCTCACCTG----TTTCCTGATCTAATTATTCATGCTGTGGAAATACTTAAGTGGCATATGCAAGCAATTCACTG-TGTATCCATTTTCTATTTTCTC-CTTTAACCAAATATCTCTCTGCATTAGATAAATGGTGTTTCACAATTTGCAGTTTGAGATTGGAGCCACTTTCCTTTTT i mm10.chr8 C 0 I 3 s canFam3.chr16 16857207 175 - 59632846 TGTTTCACCTGATAGTTT-CTGAGTTAATTATTTGTGCTGTAGAAAAATTAAAATGGCATATGCAAGCAATTTATTGCTATGTCAGTTTTCTACTTTCTC-CTTTGACAAAATTTCACTGT--ATTTGATAAATATTAGT-CATAGTTTGCAGTTTGGGATTTGGGCCTTTTCTCAGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1345063 172 - 2520184 TGTTTCTCCTGGCAGTT--CTAGGTTAATTAATTATATGGCAGAAAAATTAGAATGGTAGATGCAAGTAATTCATTGCTTTATCAG-TTTCTCTCTTCTC-CTTTGGCCAAATTTCACTGT--ATCTGATA-ATATTTTTT-ATAGTTTGCAGGTTGAGATTGGAGCCACTTCTAAGTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=1120754.000000 s hg38.chr4_KI270789v1_alt 16880 170 + 205944 CATGATGGATGGAAGTT-TAGTTTCTAGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACTATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTATTC-------------------TGTGTGTGTGCCAATACTACTAAGAACTCAG---TTTCTC----------TTTAAA--ACATATTTTTAT s panTro5.chr4 192809107 170 + 194502333 CATGATGGATGGAAGTT-TAGTTTCTAGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACTATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTATTC-------------------TGTGTGTGTGCCAATACTACTAAGAACTCAG---TTTCTC----------TTTAAA--ACATATTTTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693608 170 + 195804263 CATGATGGATGGAAGTT-TAGTTTCTAGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACTATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTATTC-------------------TGTGTGTGTGCCAATACTACTAAGAACTCAG---TTTCTC----------TTTAAA--ACATATTTTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731039 170 + 4876863 TATGACGGATGGAAGTT-TAGTTTCTAGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACTATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTATTC-------------------TGTGTGTGTGCCAATACTACTAAGAACTCAG---TTTCTC----------TTTAAA--ACATATTTTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615504 124 + 115148730 TATGATGGATGGAAGTT-TAGTTTCTAGTTTTTGTATGTTTAAATACGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACTGTTTTAACAAA-TCTTTAGCCTCTGGAGTATGTATTT-------------------TGTGTGTGT------------------------------------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900248 172 + 190429646 TATTACGGATGGAAGTC-TAGTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAAAATACG--------------------TCTGATACGATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847678 172 + 189454096 TATTACGGATGGAAGTC-TAGTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACGATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228820 172 - 25927173 TATTACGGATGGAAGTC-TAGTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATACG--------------------TCTGATACCATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263234 172 + 4669795 TATTACGGATAGAAGTC-TAGTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACGATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220412 169 + 135778131 TATTACGGATGGAAGTCTTATTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGATTTTAAGAATA------------------------TGATACGATTTTAACAAA-TCTTGAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2650977 172 - 2847728 TATTACGGATGGAAGTC-TAGTTTCTGGGTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATATGATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 782854 172 + 2368649 TATTACAGATGGAAGTC-TACTTTCTGGTTTTTGTATGTTTAAATAGGTCTCCATAGGTTTTAAGAATATG--------------------TCTGATACGATTTTAACAAA-TCTTTAGCCTCTGGAGTATGTCTTT-------------------TGTGTGTGTGCCAATACTACTAAGAACTTAG---TTTCAC----------TTGAAAACACATATTTTTAT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161275 177 - 11315646 TAGTACAGATGGAAGTT-TAGCTGTTGGCATTTGTACATTTAAATAGATTTCCATAAATTTTATGAGTATTTGTT-------------TACTCTGATACTGTTTTACTATA-TCCTTTCCTTGTAGAGTATATATTT-------------------GATGTGTGTGTT-TTAATACTAAGAGCACAG---TTTTAT----------TTAAAAACAGAC-TTTTTAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86494941 165 - 129401213 TTTCATGGATAGAAGTT-TAGAAT---GAATTTTTGAATTTAAATAGGTTTCTATAGGCTTTAAGAATATGCATT-------------TACTCTGAAAC-ACTTTTATAAG-TTTCTGGTCCACTTGGTAGGTGTTT-------------------GATGTTCTTGTTAATAATAGTAAGGAAGAAA---TTTTAT----------TTTAAAA----------TAA i mm10.chr8 I 3 C 0 s canFam3.chr16 16857382 219 - 59632846 TATTATAGATGGGAGTT-TAGTTCCCAG---TTGTTCGTTTAAGTAGGTTGCCACAGATTTTAAGAATATGGTTTtattctactattctactattctactattttactaAAGCCTTTAACCTCTGGAgtatgtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTAATACTACCAGTGGCTCAG---CTTTACGTTTTGTTTTTTTAAGATTTATTTATTTAT i canFam3.chr16 C 0 I 175 s dasNov3.JH570353 1345235 167 - 2520184 TATTATAGATGGAAATT-TAGTCTCTAGCTGTTATTTATTTAAATAGGTTTC----------AAGAATATGTGTTTAA-------------TCTGATACTACTTTCCAAAA-TCTCTAGCTTCTGGAGTGTGTATTT---------------------CTTTTGTGCTAACACTATCAAAGACCCAGAACAGTTAT----------TTTAAAACAGGTATTTT--- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878091 295 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=447007.000000 s hg38.chr4_KI270789v1_alt 17050 76 + 205944 GCCCTC--------------------------CATCCCTGCTCCACCCC----ATCA--TTTTTCCTGGGAGCAG-CCAAAGCCATAGACAGAGTAGGAATTTAAATGT s panTro5.chr4 192809277 76 + 194502333 GCCCTC--------------------------CATCCCTGCTCCACCCC----ATCA--TTTTTCCTGGGAGCAG-CCAAAGCCATAGACAGAGTAGGAATTTAAATGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693778 76 + 195804263 GCCCTC--------------------------CATCCCTGCTCCACCCC----ATCA--TTTTTCCTGGGAGCAG-CCAAAGCCATAGACAGAGTAGGAATTTAAATGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731209 76 + 4876863 GCCCTC--------------------------CATCCCCGCTCCACCCC----ATCA--TTTTTCCTGGGAGTAG-CCAAAGCCATAGACAGAGTAGGAATTTAAATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615628 34 + 115148730 --------------------------------------------------------------------------G-CCAAAGCCATAGACAGAACAGGAATTTAAACGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900420 76 + 190429646 GCCCTC--------------------------CATCCCCACTCCACCCC----ATCA--TTTTTCCTGAGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847850 76 + 189454096 GCCCTC--------------------------CATCCCCACTCCACCCC----ATCA--TTTTTCCTGCGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24228992 76 - 25927173 GCCCTC--------------------------CATCCCCACTCCACCCC----ATCA--TTTTTCCAGCGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263406 76 + 4669795 GCCCTC--------------------------CATCCCCACTCCACCCC----ATCA--TTTTTCCTGCGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220581 76 + 135778131 GCCCTC--------------------------CATCCCCTCTCCACCCC----ATCA--TTTTTCCTGGGAGTAG-CCAAAGCCATAGACGGAGTAGGAACTTAAATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651149 76 - 2847728 GCCCTC--------------------------CATCCCCACTCCACCCC----ATCA--TTTTTCCTGCGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783026 76 + 2368649 GCCCTC--------------------------CATTCCCACTCCACCCC----ATCA--TTTTTCCTGGGAGCAG-CCAAAGCCATAGACGGAGTAGGAATTTAAATGT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161452 65 - 11315646 GCCCT---------------------------------------ACCCC----ATCATTTTTTTTCTAGGAGCAG-GCAAAGCCACAGGTGCAATAGGCATTTAGATGT i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86495106 76 - 129401213 GCCCCC--------------------------TTTCCACAGTCCCACTA----TTTT--CCTTTGCTAGTACCAG-GAAAACCACAACACTCTGCTCTAATTTTACTGC i mm10.chr8 C 0 C 0 s canFam3.chr16 16857776 107 - 59632846 gCCCTCAGTTTTACTTTTAAGAAGATATTTTTCATTCCTCTACCAACACCAGTTTTT--CCTTTCCTGGGAGCAGCCCAAAGCCACAGATGAAGTAACAATTTAAATAT i canFam3.chr16 I 175 C 0 s dasNov3.JH570353 1345402 76 - 2520184 ACACGC--------------------------CACCCCACTATCACCCT----ATTT--CATTTCCTGGGAGCAG-CCAAGTCCACAGACATATTAGATCTTTCAGCTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878091 295 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=252739.000000 s hg38.chr4_KI270789v1_alt 17126 41 + 205944 AATTTACAAATG--CTGTCCTTCTCATTCCTCCTCCTGTGG-------TG-- s panTro5.chr4 192809353 41 + 194502333 AATTTACAAATG--CTGTCCTTCTCATTCCTCCTTCTGTGG-------TG-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693854 41 + 195804263 AATTTACAAATG--CTGTCCTTCTCATTCCTCCTTCTGTGG-------TG-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731285 41 + 4876863 AATTTACAAATG--CTGTCCTTCTCTTTCCTCCTCCTGTGG-------TG-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615662 41 + 115148730 AATTTATAAATG--CTGTCCTTCTCATTCCTCCTCCTGCGG-------TG-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900496 41 + 190429646 AACTTACAAATG--CTGTCCTTCTCGTTCCTCCTCCTGTGG-------TG-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847926 41 + 189454096 AACTTACAAATG--CTGTCCTTCTCGTTCCTCCTCCTGTGG-------TG-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229068 41 - 25927173 AACTTACAAATG--CTGTCCTTCTCGTTCCTCCTCCTGTGG-------TG-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263482 41 + 4669795 AACTTACAAATG--CTGTCCTTCTCATTCCTCCTCCTGTGG-------TG-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220657 41 + 135778131 AATTTACAAATG--CTGTCCTTCTCATTCCTCCTCCTGTGG-------TG-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651225 41 - 2847728 AACTTACAAATG--CTGTCCTTCTCATTCCTCCTCCTGTGG-------TG-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783102 41 + 2368649 AATTTACAAATG--CTGTCCTTCTCATTCCTCCTACTGTGG-------TG-- i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86495182 32 - 129401213 AACTTAGGACAT--TTGGCCCTTGCCTTCCTCAT------------------ i mm10.chr8 C 0 C 0 s canFam3.chr16 16857883 41 - 59632846 AATTTGTAAATC--CTGCCCCTCTCCTCTCACTTCTTATAT-------TG-- i canFam3.chr16 C 0 I 24 s dasNov3.JH570353 1345478 49 - 2520184 CATTTGTGAAAGGTCTGCCCTT---GTTTCTCATCCTATGAGCTTCACTGTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878091 295 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=364133.000000 s hg38.chr4_KI270789v1_alt 17167 56 + 205944 ATTTGTCCCAGGCCTCCTCTCTTCCT--------CTTCTAAGTCTGAATCAATATCAGTTAACA s panTro5.chr4 192809394 56 + 194502333 ATTTGTCCCAGGTCTCCTCTCTTCCT--------CTTCTAAGTCTGAATCAATATCAGTTAACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693895 56 + 195804263 ATTTGTCCCAGGTCTCCTCTCTTCCT--------CTTCTAAGTCTGAATCAATATCAGTTAACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731326 56 + 4876863 ATTTGTCCCAGGCCTCCTCTCTTCCT--------CTTCTAAGTCTGAATCAATATCAGTTAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615703 56 + 115148730 ATTTGTCCCAGGCCTCCTCTCTTCCT--------CTTCTAAGTCTGAATCAGTATCAGTTAACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900537 54 + 190429646 ATTTATCCCAGGCCGC--CGCCTCCT--------CTTCTGAGTCGGTGTCAATATCAGTTAACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187847967 54 + 189454096 ATTTGTCCCAGGCCGC--CGCCTCCT--------CTTCTGAGTCCGTGTCAATATCAGTTAACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229109 54 - 25927173 ATTTGTCCCAGGCCGC--CACCTCCT--------CTTCTGAGTCCGTGTCAATATCAGTTAACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263523 54 + 4669795 ATTTGTCCCAGGCCGC--CACCTCCT--------CTTCTGAGTCCGTGTCAATATCAGTTAACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220698 54 + 135778131 ATTTGTCCCAGGCCAC--CGCCGCCT--------CTTCTGAGTCCGAGTCAATATCAGTTAACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651266 54 - 2847728 ATTTGTCCCAGGCCGC--CACCTCCT--------CTTCTGAGTCCGTGTCAATATCAGTTAACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783143 54 + 2368649 ATTTATCCCAGGCTTC--TTCCTCCT--------CTTCTGAGCCTGAATCAATATCAGTTAACA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3878386 56 + 3993831 ATTTGTTCCAGGCTTCCTTTCCTCCT--------CTTCTAAGCCTGAATCAGTATCAGTTAACA i proCoq1.NW_012145301v1 I 295 I 37 s mm10.chr8 86495214 59 - 129401213 ACTTTTCTTTGCTCTC----CTACCTGGTGGTTGCTTTTGGTTTTCCTTACTGAACAG-TAACA i mm10.chr8 C 0 C 0 s canFam3.chr16 16857948 55 - 59632846 ATTTGTTCCAGGCGTCTTGTCCTCCT--------TTTTTT-GCTTGAGTCAGTGTCAGTTGGCC i canFam3.chr16 I 24 C 0 s dasNov3.JH570353 1345527 56 - 2520184 ATTTGCTCCAGGCTCCCGGTCCTCAT--------CTTCGAAGACTGAATCAACATCAGTTAACA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=91577.000000 s hg38.chr4_KI270789v1_alt 17223 20 + 205944 CTGTCTCGCCAACACTCC------------------TA s panTro5.chr4 192809450 20 + 194502333 ATGTCTCACCAACACTCC------------------TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693951 20 + 195804263 ATGTCTCACCAACACTCC------------------TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731382 20 + 4876863 ATGTCTCGCCAACACTCC------------------TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615759 38 + 115148730 ATGTCTCACCAACACTCCTAATTGGTTTTTAGTATATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900591 37 + 190429646 ATGTTTCCCCAACACTCC-AGATTGGTTTTAGTGTGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848021 37 + 189454096 ATGTTTCCCCAACACTCC-AGATTGGTTTTAGTGTGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229163 37 - 25927173 ATGTTTCCCCAACACTCC-AGATTGGTTTTAGTGTGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263577 36 + 4669795 ATGTTTCCCCAACACTCC--GATTGGTTTTAGTGTGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220752 37 + 135778131 GTGTTTCCCCAACACTCC-AGATTGGTTTCAGTGTGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651320 36 - 2847728 ATGTTTCCCCAACACTCC--GATTGGTTTTAGTGTGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783197 37 + 2368649 GTGTTTCCCCAACACTCC-AGATTGGTTTTAGTATATA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86495273 20 - 129401213 GAGCATAGCTAACCATCC------------------TA i mm10.chr8 C 0 I 2 s canFam3.chr16 16858003 20 - 59632846 ATACTTGGCCAACACTCC------------------TA i canFam3.chr16 C 0 I 19 s dasNov3.JH570353 1345583 1 - 2520184 -------------------------------------A i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878442 37 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=300131.000000 s hg38.chr4_KI270789v1_alt 17243 39 + 205944 TGAGCTCCACCTCAC---AGA------TTAGCAGAGC-------CTTTTCTCATT s panTro5.chr4 192809470 39 + 194502333 TGAGCTCCACCTCAC---AGA------TTAGCAGGGC-------CTTTTCTCATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192693971 39 + 195804263 TGAGCTCCACCTCAC---AGA------TTAGCAGAGC-------CTTTTCTCATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731402 39 + 4876863 TGAGCTCCACCTCAC---AGA------TTAGCAGGGC-------CTTTTCTCATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615797 39 + 115148730 TGAGCTCCACCTCAC---AGA------TTAGCAGAGG-------CTTTTCTCATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900628 39 + 190429646 TGAGCGCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848058 39 + 189454096 TGAGCGCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229200 39 - 25927173 TGAGCGCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263613 39 + 4669795 TGAGCGCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220789 39 + 135778131 TGAACCCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651356 39 - 2847728 TGAGCGCCACCTCAC---GGA------TTAGCAGAAC-------CGTTTCTCATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783234 39 + 2368649 TGAGCCCCACCTCAT---GGA------TTAGCAGAAC-------CGTTTCTCATT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3878479 39 + 3993831 TGAGCTCCACCTCAC---AGG------TTGGCAAAGC-------CCTCTCTCATT i proCoq1.NW_012145301v1 I 37 I 20 s mm10.chr8 86495295 48 - 129401213 TGTTCTCTACTGTATTTGAGATCTGCTTTAGCAAAGC-------CTTTACTCATT i mm10.chr8 I 2 C 0 s canFam3.chr16 16858042 46 - 59632846 TGAGCTCTGTCTTAC---AGA------TTAGTAGTTTTCTCCCATCTCTCTCATT i canFam3.chr16 I 19 C 0 s dasNov3.JH570353 1345584 38 - 2520184 TGAGCTCTACCTCAC---AGA------ATGGCAAAGC-------CCTTTC-CATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=129000.000000 s hg38.chr4_KI270789v1_alt 17282 19 + 205944 TCAGAGGTAACAGTTGAAT s panTro5.chr4 192809509 19 + 194502333 TCAGAGGTAACAGTTGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694010 19 + 195804263 TCAGAGGTAACAGTTGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731441 19 + 4876863 TCAGAGGTAACAGTTGAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615836 19 + 115148730 TAAGAGGTAACAGTTGAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900667 19 + 190429646 TAAGAGGTGACAGTTGAAT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187848097 19 + 189454096 TAAGAGGTGACAGTTGAAT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24229239 19 - 25927173 TAAGAGGTGACAGTTGAAT i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3263652 19 + 4669795 TAAGAGGTGACAGTTGAAT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134220828 19 + 135778131 TAAGAGGTAACAGTTGAAT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2651395 19 - 2847728 TAAGAGGTGACAGTTGAAT i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 783273 19 + 2368649 TAAGAGGTAACAGTTGAAT i colAng1.NW_012116221v1 C 0 I 1 s mm10.chr8 86495343 19 - 129401213 CATAAGGCAATAATTGAAA i mm10.chr8 C 0 I 1 s canFam3.chr16 16858088 19 - 59632846 TACAAAGCAACAATTGATT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1345622 19 - 2520184 GAAAAGGCAGCAAATAAGC i dasNov3.JH570353 C 0 I 1 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878518 20 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=1117119.000000 s hg38.chr4_KI270789v1_alt 17301 150 + 205944 GTGAATGAGTTG-AATC-AGGCTGATATAGGT-TTCTACTGGATTTTCACTTTTCCACCTATAAAA-ATGAGAAAAATGAGAGACAGCTGAAAAAGGACCAAAGACTGCCTCT-GAGGCTGTATGAGCAAGCTGCTTATCCCTGAGGCTGACACT s panTro5.chr4 192809528 150 + 194502333 GTGAATGAGTTG-AATC-AGGTTGATATAGGT-TTCTACTGGATTTTCACTTTTCCACCTATAAAA-ATGAGAAAAATGAGAGACAGCTGAAAAAGGACCAAAGACTGCCTCT-GAGGCTGTATGAGCAAGCTGCTTATCCCTGAGGCTGACACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694029 150 + 195804263 GTGAATGAGTTG-AATC-AGGTTGATATAGGT-TTCTACTGGATTTTCACTTTTCCACCTATAAAA-ATGAGAAAAATGAGAGACAGCTGAAAAAGGACCAAAGACTGCCTCT-GAGGCTGTATGAGCAAGCTGCTTATCCCTGAGGCTGACACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731460 150 + 4876863 GTGAATGAGTTG-AATC-AGGCTGATATAGGT-TTCTACTGGATTTTCACTTTTCCACCTATAAAA-ATGAGAAAAATGAGAGACAGCTGAAAAAGGACCAAAGACTGCCTCT-GAGGCTGTATGAGCAAGCTGCTTATCCCTGAGGCTGACACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112615855 146 + 115148730 GTGAATGAGTTG-AATC-AGGTTGATATAGGT-TTCTACTGGATTTTTACTTTTCCACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGAAAAAGGACCAAAGACTGCTTCT-GAGGCTGTATG----AGCTGCGTATCCctgaggctgacact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900687 147 + 190429646 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCctgaggctgacact i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187848117 147 + 189454096 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCCTGAGGCTGACACT i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24229259 147 - 25927173 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCctgaggctgacact i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3263672 147 + 4669795 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCctgaggctgacact i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134220848 143 + 135778131 GTGAATGAGTTG-AATC-ACGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACATATAAAA-ATGAGAAAAATGAG----AGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCctgaggctgacact i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2651415 147 - 2847728 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCTACTGGATTTTCACTTTTCTACCTATAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCAGAGACCGCCTCTGGACACTGTATG----AGCTGCTTATCCctgaggctgacact i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 783293 147 + 2368649 GTGAATGAGTTG-AATC-AGGTTGATGTAGGT-TTCCACTGGGTTTTCACTTTTCTACCTGTAAAA-ATGAGAAAAATGAGAGATAGCTGGAAAATGACCGGAGACCACCTCTGGACACTGTATG----AGCTGCTTATCCCTGCGGCTGACACT i colAng1.NW_012116221v1 I 1 C 0 s proCoq1.NW_012145301v1 3878538 146 + 3993831 GTGAATGCATTG-AATC-AGGTTGAGTTGGAT-TTCTACTGGATCTTAATTTTTCTACCTAT-AAA-ATGAGAAAAATGAAAGATTCCTGAAAAGGGACCAAAGATGACATCTTGAAGCTATATG----AGCTGCTTATCCCTGAGGCTGACact i proCoq1.NW_012145301v1 I 20 I 138 s mm10.chr8 86495363 141 - 129401213 GTGGATGAATGGAAATC-AGGCTGAGTTAAGTGCTCTTTTAGTTCTTAATGTCTTTACATGTAAAACATATGAAAG------GATTGCT---AAGGGACCAAGACATACATCTTAAAGCTCTATA----AAATGCTTATCATCATGGCTGACATT i mm10.chr8 I 1 C 0 s canFam3.chr16 16858108 146 - 59632846 GCAAGTGAGTTA-AATG-AGGTTGAGCTAAAT-TTCTACTGCATCTTAATTTTGGTACCTAC-AAA-TTGAAAAAGATGAGGGGGTTTCTAAAAAGGACCAAAGACCATGTCTTGAAGCTTTATG----AGCTGCTCATTTCTGAGGCTGACAAC i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1345642 147 - 2520184 AGGAAAGAGCTG-AATCAAGGCTGAGTTAGAT-TCCCTTAGGGTCTTAATTTTTCCACCTGT-AAA-CTGAGGAAGATGAGGGGTTCCTGAAAATGGGCCCAAGTCCACATCTTGAAGCCATATG----AGCTGCTTATCACAGAGCCTGATGAT i dasNov3.JH570353 I 1 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=152658.000000 s hg38.chr4_KI270789v1_alt 17451 26 + 205944 GTTTCACTGACTTCAATAAGATCAAA-- s panTro5.chr4 192809678 26 + 194502333 GTTTCACTGACTTCAATAATATCAAA-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694179 26 + 195804263 GTTTCACTGACTTCAATAATATCAAA-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731610 26 + 4876863 GTTTCACTGACTTCAGTAAGATCAAA-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616001 26 + 115148730 gtttgaccgacttcactaagatcaaa-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900834 26 + 190429646 gtgtcactgacttcactaagatcaaa-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848264 26 + 189454096 GTGTCACTGACTTCACTAAGATCAAA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229406 26 - 25927173 gtgtcactgacttcactaagatcaaa-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263819 26 + 4669795 gtgtcactgacttcactaagatcaaa-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134220991 26 + 135778131 gtgtcactgacttcactaaggtcaaa-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651562 26 - 2847728 gtgtcactgacttcactaagatcaaa-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783440 26 + 2368649 GTGTCACTGACTTCACTAAGATCAAA-- i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86495504 26 - 129401213 TTAAAACTAGCTTCattaggatagaa-- i mm10.chr8 C 0 I 4401 s canFam3.chr16 16858255 16 - 59632846 ---------Atttcac-aagatcaaa-- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1345789 27 - 2520184 -GTTTAATAATTTCACTAAGACTTGGGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878684 138 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=775049.000000 s hg38.chr4_KI270789v1_alt 17477 127 + 205944 GATGGAGTT-GGATTTGAACCTTGGTCTCTCTTATTTC--GAGTACATTACATTAGATTTTGTATTTACTGTTTCCTTCTGTTACTCTAATGGAATATGATACGGTCATAGACTATATTAATTAAGACAT s panTro5.chr4 192809704 127 + 194502333 GATGGAGTT-GGATTTGAACCTAGGTCTCTCTTATTTC--GAGTACATTACATTAGATTTTGTATTTACTGTTTCCTTCTGTTACTCTAATGGAATATGATACGGTCATAGACTATATTAATTAAGACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694205 127 + 195804263 GATGGAGTT-GGATTTGAACCTAGGTCTCTCTTATTTC--GAGTACATTACATTAGATTTTGTATTTACTGTTTCCTTCTGTTACTCTAATGGAATATGATACGGTCATAGACTATATTAATTAAGACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731636 127 + 4876863 GATGGAGTG-GGAGTTGAACCTAGGTCTCTTTTATTTT--GAGTACATTACATTAGATTTTGTATTTACTGTTTCCTTCTGTTACTCTAATGGAATATGATATGGTCATAGACTATATTAATTAAGACAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616027 121 + 115148730 gatggagtt-ggatttgaacctaggtctc--ttattcc--gagtacattacATTAGATTTTGTATTTACTGTTTCCTTCCGTTACTCTGATGGAATATGATATGGTCGTAGACTAT----ATTAAGACAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900860 127 + 190429646 cacagagtt-ggatttgaacccacgtctctcttatttc--aagtacattacATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848290 127 + 189454096 CACAGAGTT-GGATTTGAACCCACGTCTCTCTTATTTC--AAGTACATTACATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229432 129 - 25927173 cacagagtt-ggatttgaacccacgtctcttttatttcagaagtacattacATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263845 127 + 4669795 cacagagtt-ggatttgaacccacgtctctcttatttc--gagtacattacATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221017 127 + 135778131 cacagagtt-ggatttgaacccatgtctctcttatttc--gagtacagtacATTAGATTTTGTATTCACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651588 127 - 2847728 cacagagtt-ggatttgaacccatgtctctcttatttc--gagtacattacATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAGGCTATGGTCATAGACTATAGTAATTAAGACAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783466 127 + 2368649 CACAGAGTT-GGATTTGAACCCACGTCTCTCTTATTTC--GAGTACATTACATTAGATTTTGTATTTACTGTTTTCTTCTGTTACTCTAATGGAATAAGCTATGGTCATAGACTATAGTAATTAAGACAT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16858271 118 - 59632846 cagagagctagaatttgaaagcaggcctctcttatttc--aagtATGTTCCCTTAGATTCTTTATGTAGTATTTTCTTCTGTT-TTATCATGGGAT--------GCCA-GGACTATATCAATTGAGACCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1345816 114 - 2520184 -----GATG-GAATTTGAACCCAGGTCTTTCTTACTTT--AATTACATTATAATATACTCTTTATTAAGTAATTTATCCTATCGCTACCATGAGATA--------CCCCAGGCCGTATCAGTTGAGACTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878684 138 + 3993831 I e micMur3.chr14 17456467 707 - 93316391 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=560471.000000 s hg38.chr4_KI270789v1_alt 17604 66 + 205944 ACTTCTCAGGTATAAGTGGG-TATAGTATAATAATGCTACTGCTTTTCAGTAAGTGGATCAATTTGA s panTro5.chr4 192809831 66 + 194502333 ACTTCTCAGGTATAAGTGGG-TATAGTATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694332 66 + 195804263 ACTTCTCAGGTATAAGTGGG-TATAGTATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731763 66 + 4876863 ACTTCTCAGGTATAAGTGGG-TATAGTATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616148 66 + 115148730 ACTTCTCAGGTATAAGTGGG-TGTAGTATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188900987 66 + 190429646 ACTTCTGAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGAATTAATTTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848417 66 + 189454096 ACTTCTGAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGAATTAATTTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229561 66 - 25927173 ACTTCTGAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGAATTAATTTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3263972 66 + 4669795 ACTTCTGAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221144 66 + 135778131 ACTTCTCAGGTATAAGTGGG-TACAGAATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651715 66 - 2847728 ACTTCTGAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783593 66 + 2368649 ACTTCGCAGGTATAAGTGGG-TATAGAATAATAATGCTACTGCTTTTCAGTAAGTGGATTAATTTGA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17457174 66 - 93316391 ACTTCTTAGGTATAAGTGGG-CGTAGAATAATGATGCTACTGCTTTTTGATAAGTGGATTAGTTTTA i micMur3.chr14 I 707 C 0 s proCoq1.NW_012145301v1 3878822 66 + 3993831 ACTTCTTAGGTATAAGTGGG-CGTAGAATAATGATGCTACTGCTTTTTGATAAGTGGATTAGTTTGA i proCoq1.NW_012145301v1 I 138 I 17 s canFam3.chr16 16858389 63 - 59632846 ACTTCATGGCTGTAACTGAGTTATAGAATAATAATGCTACTGCTTTTGAACAA----ACAAATTTGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1345930 51 - 2520184 ---------------GCTGT-TGTAGAAGAATAATTTTATTGCTTTTCAAGAACAGGCAATGTTTGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=18373.000000 s hg38.chr4_KI270789v1_alt 17670 3 + 205944 CAC s panTro5.chr4 192809897 3 + 194502333 CAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694398 3 + 195804263 CAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731829 3 + 4876863 CAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616214 3 + 115148730 CAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901053 3 + 190429646 CAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848483 3 + 189454096 CAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229627 3 - 25927173 CAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264038 3 + 4669795 CAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221210 3 + 135778131 CAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651781 3 - 2847728 CAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783659 3 + 2368649 CAC i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17457240 3 - 93316391 TAC i micMur3.chr14 C 0 I 14 s canFam3.chr16 16858452 2 - 59632846 -AC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1345981 3 - 2520184 TAC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878888 17 + 3993831 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=34082.000000 s hg38.chr4_KI270789v1_alt 17673 5 + 205944 GGGAA s panTro5.chr4 192809900 5 + 194502333 GGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694401 5 + 195804263 GGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731832 5 + 4876863 GAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616217 5 + 115148730 GGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901056 5 + 190429646 GGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848486 5 + 189454096 GGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229630 5 - 25927173 GGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264041 5 + 4669795 GGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221213 5 + 135778131 GGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651784 5 - 2847728 GGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783662 5 + 2368649 GAGAA i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16858454 5 - 59632846 AAGAA i canFam3.chr16 C 0 I 9 s dasNov3.JH570353 1345984 5 - 2520184 CAGAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3878888 17 + 3993831 I e micMur3.chr14 17457243 14 - 93316391 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=530514.000000 s hg38.chr4_KI270789v1_alt 17678 66 + 205944 ---------TTCACAATTTGGCCATTTTATAAACAGAAATTATAAGGGA----CTATCTTGCAGAAAATTTTGTCCAAA s panTro5.chr4 192809905 66 + 194502333 ---------TTCACAATTTGGCCATTTTATAAACAGAAATTATAAGGGA----CTATCTTGCAGAAAATTTTGTCCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694406 66 + 195804263 ---------TTCACAATTTGGCCATTTTATAAACAGAAATTATAGGGGA----CTATCTTGCAGAAAATTTTGTCCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731837 66 + 4876863 ---------TTCACAATTTGGCCATTTTATAAACAGAAATTATAAGGGA----CTATCTTGCATAAAATTTGGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616222 70 + 115148730 ---------TTCACAGTTTGGCCATTTTATAAACAGAAATTATAAGGGACTATCTATCTTGCAGAAAATTCAGTCCAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901061 63 + 190429646 ---------TTCACCA-TTGGCCATTTTATAAAC--AAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848491 63 + 189454096 ---------TTCACCA-TTGGCCATTTTATAAAC--AAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229635 63 - 25927173 ---------TTCACCA-TTGGCCATTTTATAAAC--AAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264046 63 + 4669795 ---------TTCACCA-TTGGCCATTTTATAAAC--AAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221218 65 + 135778131 ---------TTCACCA-TTGGCCATTTTATAAACAGAAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651789 63 - 2847728 ---------TTCACCA-TTGGCCATTTTATAAAC--AAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783667 66 + 2368649 ---------TTCACAATTTGGCCATTTTATAAACAGAAATTATAAGGGA----CTATCTTGCAGAAAATTCAGTCCGAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17457257 64 - 93316391 ---------TTTACAATTTGGACATTTTAGAAACAGGAATTATAAGAGA------CTCTTGCAGGAAATTCTGTCCAAA i micMur3.chr14 I 14 C 0 s proCoq1.NW_012145301v1 3878905 66 + 3993831 ---------TTCACAATTTGGACATTTTATAAACAGGAATTATAAGAGA----CTCTCTTGCAGGAAATTCTGTCCAAA i proCoq1.NW_012145301v1 I 17 C 0 s canFam3.chr16 16858468 66 - 59632846 ---------CTCACAGTTTGATCATTTTCTGAACAGAAATTATAATAAA----CTATCTTGCAAGAAATTCTGTCCAAA i canFam3.chr16 I 9 C 0 s dasNov3.JH570353 1345989 75 - 2520184 TAATAGATTCTCATAATTTGGTCATTTTCTGAGGAGAAATTAAAAGAGA----AAATCTTGCAGGGGATTCTGTCCAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161517 3 - 11315646 I a score=419839.000000 s hg38.chr4_KI270789v1_alt 17744 46 + 205944 ATTTTGATTAAAACAGG-ATAA---CAAAATAAA--TTTATACAAATAAAAC s panTro5.chr4 192809971 49 + 194502333 ATTTTGATTAAAACAGG-ATAATAACAAAATAAA--TTTATACAAATAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694472 49 + 195804263 ATTTTGATTAAAACAGG-ATAATAACAAAATAAA--TTTATACAAATAAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731903 49 + 4876863 ATTTTGATTAAAACAGG-ATAATAACAAAATAAA--TTTATACAAATAAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616292 49 + 115148730 ACTTTGATTAAAACAGG-ATGATAACAAAATAAA--TTTATACAGATAAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901124 48 + 190429646 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TATATGCAAATAAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848554 48 + 189454096 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TATATGCAAATAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229698 48 - 25927173 GCTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TATATGCAAATAAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264109 48 + 4669795 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TATATGCAAACAAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221283 48 + 135778131 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TTTATGCAAATAAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651852 48 - 2847728 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TATATGCAAACAAAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783733 48 + 2368649 ACTTTGATTAAAACAGG-GTAATAAC-AAATAAA--TTTATGCAAATAAAAT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17457321 49 - 93316391 ACTTTGATTAAAGCAGC-ATAATAGCAAAATATA--TTTATACAAATAAAAC i micMur3.chr14 C 0 I 477 s proCoq1.NW_012145301v1 3878971 49 + 3993831 ACTTTGATTAAAGCAGC-TTAATAGCAAAATAAA--TTTATATACATAAAAC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11161520 49 - 11315646 ACTTTGATTAAAGCAGA-ATAAAAACAAAATAAA--TTTATACAAATAAAAC i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16858534 51 - 59632846 ACTTTGATTAAAACAAACCTAATAACATAATAAAGTTTTATTCAAATAAAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1346064 51 - 2520184 GCTTTGATTAAAATAAGCATAAAAACAAAAGACA-TTTTAGACAAATAAAAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=634457.000000 s hg38.chr4_KI270789v1_alt 17790 88 + 205944 TTAGGAAT-AAAGAAGGTGACACGTGACCAAACACTGCATCAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT s panTro5.chr4 192810020 86 + 194502333 TTAGGAAT-AAAGAAGGTGACACGTGACCAAACACTGCATCAAATTT--GTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694521 86 + 195804263 TTAGGAAT-AAAGAAGGTGACACGTGACCAAACACTGCATCAAATTT--GTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3731952 88 + 4876863 TTAGGAAT-AAAGAAGGTGACACGTGACCAAACACTGCATCAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616341 88 + 115148730 TTAGGAAT-AAAGAAGGTGACACGTGACCAAACACTGCATCAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901172 88 + 190429646 TTAGGAAT-AAAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848602 88 + 189454096 TTAGGAAT-AAAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229746 88 - 25927173 TTAGGAAT-AGAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264157 88 + 4669795 TTAGGAAT-AAAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221331 88 + 135778131 TTAGGAAT-AAAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCAACTTCTAATTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651900 88 - 2847728 TTAGGAAT-AAAGAAGGTGACATGTGACCAAACACTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783781 88 + 2368649 TTAGGAAT-AAAGAAAGTGACATGTGACCCAACTCTGCATGAAATTTCTGTTAGCACCTTTAACACATATATCCCGACTTCTAATTTTT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3879020 87 + 3993831 ATAGGACTCAAAAAAGATGGCACATGACCAAACG--GTATGAAATTTCTGTTAACAACTTTAATGCATATGTCCCAATTTCTACTTTTT i proCoq1.NW_012145301v1 C 0 I 3530 s otoGar3.GL873580 11161569 82 - 11315646 ATAGGACTCAAAAAAGATGGCAC----CCAAAT---GTATAAAATTTCTTTTAACAACTTCAGTGCATTTATCCCAATTTCTAATTTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16858585 56 - 59632846 ---GGGCT-AAA------------------AACTATGTATGGGATTTCTGTTAGCGACTTT----------TCCAAAATTTTCCTATT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1346115 75 - 2520184 TCAGGGTTCAAAAGAGATGGCCCATGACCAAA-ATTGTACGAAACTTCTGTTAGCTACTTTAGTGCATGCATTCTT------------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e micMur3.chr14 17457370 477 - 93316391 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=111357.000000 s hg38.chr4_KI270789v1_alt 17878 19 + 205944 TCCAAAAACCCACATAtt----t s panTro5.chr4 192810106 19 + 194502333 TCCAAAAACCCACATAtt----t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694607 19 + 195804263 TCCAAAAACCCACATAtt----t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732040 19 + 4876863 TCCAAAAACCCACATAtt----t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616429 19 + 115148730 TCTAAAAACCCACATAtt----t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901260 19 + 190429646 TCTAAAAACCCATTTATT----T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848690 19 + 189454096 TCTAAAAACCCAtttatt----t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229834 19 - 25927173 TCTAAAAACCCAtttatt----t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264245 19 + 4669795 TCTAAAAACCCAtttatt----t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221419 23 + 135778131 TCTAAAAACCCACTTAtttttat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2651988 19 - 2847728 TCTAAAAACCCAtttatt----t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783869 23 + 2368649 TCTAAAAACCCACTTAtttttat i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161651 14 - 11315646 -CTAAAAACCCA---AGT----- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16858641 18 - 59632846 TCTAAAAACCCAGTTAAC----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1346190 19 - 2520184 TCTAAAATCCCACCTCTT----T i dasNov3.JH570353 C 0 I 134 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=181682.000000 s hg38.chr4_KI270789v1_alt 17897 49 + 205944 ttatttatttatatattt-tttgagatggagtctcgctctatcacccagg s panTro5.chr4 192810125 49 + 194502333 ttatttatttatatattt-tttgagatggagtctcgctctatcacccagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694626 49 + 195804263 ttatttatttatatattt-tttgagatggagtctcgctctatcacccagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732059 48 + 4876863 ttatttatttatat-ttt-tttgagatggagtctcgctctatcacccagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616448 50 + 115148730 ttatttatttatctatttatttgagacggagtcttgctctgttgtccagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901279 46 + 190429646 TTATGTATCTAt---ttt-ttccagacaaaatctcgctgtgtcacccagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848709 46 + 189454096 ttatttatctat---ttt-ttccagacaaaatctcgctgtgtcacccagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229853 46 - 25927173 tcatttatctat---ttt-ttccagacaaaatctcgctgtgtcacccagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264264 46 + 4669795 ttatttatctat---ttt-ttccagacaaaatctcgctgtgtcacccagg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221442 46 + 135778131 ttatttatctat---tct-ttccagacagagtcttgctctgtcacccagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652007 46 - 2847728 ttatttatctat---ttt-ttccagacaaaatctcgctgtgtcacccagg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783892 46 + 2368649 ttatttatctat---ttt-ttccagacagagtattgctctgtcacccagg i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161665 18 - 11315646 ---------------CCC-TTTCAGAT----------------ACTCAGA i otoGar3.GL873580 C 0 I 98 s canFam3.chr16 16858659 9 - 59632846 ------ATCTTT---TTT-------------------------------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e dasNov3.JH570353 1346209 134 - 2520184 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=768250.000000 s hg38.chr4_KI270789v1_alt 17946 158 + 205944 ctggagtgcagtggcatgatctcagctcactgcaagctctg---cctcccaggttcacgccattctcctgcctcagtctcccgtgtagctgggactacaggtgcccgccaccacgcccggctgattttttgtattttcagtagagacggggtttcaccatg s panTro5.chr4 192810174 158 + 194502333 ctggagtgcagtggcatgatctcagctcactgcaagctctg---cctcccaggttcacgccattctcctgcctcagcctcccgtgtagctgggactacaggtgcccgtcaccacgcccggttgattttttgtattttcagtagagacggggtttcaccatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694675 158 + 195804263 ctggagtgcagtggcatgatctcagctcactgcaagctctg---cctcccaggttcacgccattctcctgcctcagcctcccatgtagctgggactacaggtgcctgccaccacgcccggctgattttttgtattttcagtagagacggggtttcaccatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732107 158 + 4876863 ctggagtgcagtggcatgatctcagctcattgcaagctctg---cctcccaggttcacgccattctcctgcctcagcctcccgtgtagctgggactacaggtgcccgccaccaagcccggctgattttttgtattttcagtagagacggggtttcaccatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616498 158 + 115148730 ctagagtgcagtggggcgatctcggctcactgcaagctccg---cctcctgggttcaggccattctcctgcctcagcctcccgagtagctgtgactacagatgcctgccaccacacccagccaatgttttgcattttcagtagagacggggtttcactgtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901325 157 + 190429646 ctggagtgcggtggcgtgatctcggctcactgcaagctccg---cttcctgggttcactccattctcctgcctcagcctcctgagtagctgggaccacaggcgcccattaccatgcccggctaa-tttttgtgtttttagtagagacgggatttcaccgtg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848755 157 + 189454096 ctggagtgcagtggcgtgatctcggctcactgcaagctccg---cttcctgggttcactccattctcctgcctcagcctcctgagtagctgggaccacaggcgcccatcaccatgcccggctaa-tttttgtatttttagtagagacggggtttcaccgtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24229899 154 - 25927173 ctggagtgcagtggcgtgatctc-gctcactgcaagctccggcttttcatgggttcactca--tttcctgcctcagcctcctgagtagctgggaccacaggcgcccatcaccatgac--gctaa--ttttgtatttttagtagagacggggtttcaccgtg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264310 157 + 4669795 ctggagtgcagtggtgtgatctcggctcactgcaagctccg---ccccccgggttcactccattctcctgcctcagcctcctgagtagctgggaccacaggcgcccatcaccacgcccggctaa-tttttgtatttttagtagagacggggtttcaccgtg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221488 158 + 135778131 ctggagtgcagtggcacaatcttggctcactgcaaactccg---cctcccgggttcactccattctcctgcctcagcctcccgggtagctgggactacaggagcccgtcagcacacccggctgattttttgtatttttattagagatggggtttcaccgtg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652053 157 - 2847728 ctggagtgcagtggtgtgatctcggctcactgcaagctccg---ccccccgggttcactccattctcctgcctcagcctcctgagtagctgggaccacaggcgcccatcaccacgcccggctaa-tttttgtatttttagtagagacggggtttcaccgtg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 783938 158 + 2368649 ctagagtgcagtggcgtgatcttggctcagtgcaggctcca---cctcccgggttcactccattctcctgcctcagcctcccaagtagctggaactacaggcgcccgtcaccacgcctagctgattttttgtatttttattagagatggggtttcaccgta i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16858668 60 - 59632846 --------------------------------------------CCCCCCCAGATAACATC---------------------------CAGGAATTAAA--------------------GCTGACTATATGTAATT----TAGAGA------TTCTCCATG i canFam3.chr16 C 0 I 72 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e dasNov3.JH570353 1346209 134 - 2520184 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161683 98 - 11315646 I a score=395216.000000 s hg38.chr4_KI270789v1_alt 18104 77 + 205944 ttagcc-aggatggtctcgatctcctgacctc--gtgatcagcctgcctaggcctcccaaagtgctgggattacaggcat s panTro5.chr4 192810332 77 + 194502333 ttagcc-aggatggtctcgatctcctgacctc--gtgatccgcctgcctaggcctcccaaagtgctgggattacaggcat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694833 77 + 195804263 ttagcc-aggatggtctcgatctcctgacctc--gtgatccgcctgcctaggcctcccaaagtgctgggattacaggcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732265 77 + 4876863 ttagcc-aggatggtctcgatctcctgacctc--gtgatctgcctgcctaggcctcccaaagtgctgggattacaggcat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616656 77 + 115148730 ttagcc-aggatggtcttgatctcctgacctc--gtgatctgcccgcctaggcctcccaaagtgctgggattacaggcgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901482 79 + 190429646 ttagcc-aggatggtctcgatctcctgacctcaggtgatccaccctctttggccacccaaagcactggggttacaggcgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848912 79 + 189454096 ttagcc-aggatggtcttgatctcctgacctcaggtgatccaccctctttggccacccaaagcactggggttacaggcgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230053 80 - 25927173 ttagccaaggatggcctcgatctcctgacttcaggtgatccaccctctttggccacccaaagcactggggttacaggcgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264467 79 + 4669795 ttcgcc-aggatggtctcgatctcctgacctcaggtgatccaccctctttggccacccaaagcactggggttacaggcat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221646 79 + 135778131 ttcgcc-aggatggtctcaatctcctgacctcaggagatccaccgtctttggcctcccaaagtgctggggttacaggcgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652210 79 - 2847728 ttcgcc-aggatggtctcgatctcctgacctcaggtgatccaccctctttggccacccaaagcactggggttacaggcat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784096 79 + 2368649 tttgcc-aggatggtctcgatctcctgacctcaggtgatccaccctcttcggcctcccaaagtgctggggttacaggcgt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e dasNov3.JH570353 1346209 134 - 2520184 I e canFam3.chr16 16858728 72 - 59632846 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161683 98 - 11315646 I a score=86217.000000 s hg38.chr4_KI270789v1_alt 18181 18 + 205944 gagccaccgcacctggcG s panTro5.chr4 192810409 18 + 194502333 gagccaccgcacctggcG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694910 18 + 195804263 gagccaccgcacctggcG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732342 18 + 4876863 gagccaccgcacctggAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616733 18 + 115148730 gagccaccacacccggcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901561 17 + 190429646 gagccactgca-ccggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187848991 18 + 189454096 gagccactgcgcccggcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230133 18 - 25927173 gagccactgcgcccagGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264546 18 + 4669795 gagccactgcgcccggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221725 18 + 135778131 gagccaccgcacccggcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652289 18 - 2847728 gagccactgcgcccggcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784175 18 + 2368649 gagccaccgcgcctggAC i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1346343 18 - 2520184 GATTCACTTCACCTTACT i dasNov3.JH570353 I 134 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e canFam3.chr16 16858728 72 - 59632846 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I e otoGar3.GL873580 11161683 98 - 11315646 I a score=18444.000000 s hg38.chr4_KI270789v1_alt 18199 5 + 205944 TCCAA s panTro5.chr4 192810427 5 + 194502333 TCCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694928 5 + 195804263 TCCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732360 5 + 4876863 TCCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616751 5 + 115148730 TCCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901578 5 + 190429646 TTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849009 5 + 189454096 TTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230151 4 - 25927173 -TTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264564 5 + 4669795 TTTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221743 5 + 135778131 TTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652307 5 - 2847728 TTTAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784193 5 + 2368649 TTTAA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11161781 5 - 11315646 TCCAA i otoGar3.GL873580 I 98 C 0 s dasNov3.JH570353 1346361 3 - 2520184 CCC-- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189545002 2035 - 190850796 I e cebCap1.NW_016107886v1 923975 2059 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e canFam3.chr16 16858728 72 - 59632846 I e mm10.chr8 86495530 4401 - 129401213 I e aotNan1.NW_018492112v1 3317711 2074 - 5030052 I e saiBol1.JH378165 13035388 2038 - 14256875 I a score=87740.000000 s hg38.chr4_KI270789v1_alt 18204 7 + 205944 TTTTTTT s panTro5.chr4 192810432 7 + 194502333 TTTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694933 7 + 195804263 TTTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732365 7 + 4876863 TTTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616756 6 + 115148730 -TTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901583 7 + 190429646 TTTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849014 7 + 189454096 TTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230155 7 - 25927173 TTTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264569 7 + 4669795 TTTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221748 7 + 135778131 TTTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652312 7 - 2847728 TTTTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784198 7 + 2368649 TTTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304071 7 + 190850796 TTTTTTT i calJac3.chr3 n 2035 C 0 s saiBol1.JH378165 1219763 7 + 14256875 TTTTTTT i saiBol1.JH378165 n 2038 C 0 s cebCap1.NW_016107886v1 1270500 7 + 2196201 TTTTTTT i cebCap1.NW_016107886v1 n 2059 C 0 s aotNan1.NW_018492112v1 1710600 7 + 5030052 TTTTTTT i aotNan1.NW_018492112v1 n 2074 C 0 s otoGar3.GL873580 11161786 7 - 11315646 TTTTTTT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1346364 7 - 2520184 CTCATTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e canFam3.chr16 16858728 72 - 59632846 I e mm10.chr8 86495530 4401 - 129401213 I a score=748933.000000 s hg38.chr4_KI270789v1_alt 18211 74 + 205944 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACTTG-GGCATTTGTATG------ATT-ATTCAACAACTTGCAAATGATGC s panTro5.chr4 192810439 74 + 194502333 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACTTG-GGCATTTGTATG------ATT-ATTCAACAACTTGCAAATGATGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192694940 74 + 195804263 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACTTG-GGCATTTGTATG------ATT-ATTCAACAACTTGCAAATGATGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732372 74 + 4876863 ATGAAAGGTGATTTTTATACA-CAG--TCACAATACATG-GGCATTTGTATG------ATT-ATTCAACAACTTGCAAATGATGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616762 74 + 115148730 ATGAAAGGTGATTTTCATATG-CAG--TCACAATACATG-GGCATTTGTATG------ATT-ATCCAATAACTTCCAAATGATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901590 78 + 190429646 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAATAACTTGCAAATGATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849021 78 + 189454096 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAATAACTTGCAAATGATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230162 84 - 25927173 ATGAAAAGTG-TTTCGATATATCAGTCTCACAATACATGCGGCATTTGTATGCAATTGATTAATTCAATAACTTGCAAATGATAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264576 78 + 4669795 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAGTAACTTGCAAATGATGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221755 78 + 135778131 ATGAAAGGTGATTTTCATATA-CAG--TGACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAATAACTTGCAAATGATGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652319 78 - 2847728 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAATAACTTGCAAATGATGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784205 78 + 2368649 ATGAAAGGTGATTTTCATATA-CAG--TCACAATACATG-GGCATTTGTATG--ATTGATT-ATTCAATAACTTGCAAACGATGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304078 74 + 190850796 GTGAAAGGCAATTTTCATACA-CAG--TCACAATACACG-GGCGTTTGTGAG------GTG-ATTCAATAACTTGCAAATGATGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1219770 74 + 14256875 GTGAAAGGTGATTTTCACAGA-CAG--TCAAAATACATG-GGCATTTGTAAG------ATT-ATTCAATAACTTGCAAATGATGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270507 74 + 2196201 GTGAAAGGTGATTTTCATAGA-CAG--TCACAATACATA-GCCATTTGTAAG------ATT-ATTCAATAACTTGCGAATGATGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710607 74 + 5030052 GTGAAAGGTGATTTTCATAGA-CAG--TCACAATACATG-GGCATTTGTAAG------ATT-ATTCAATAACTTGCAAATGATGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11161793 71 - 11315646 ATGACAACTGATT---GAAAA-AGG--TCAAAATACACA-GGCATTTTTGAG------ACC-TTTGAGTAAATTGCAAATGATGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16858800 65 - 59632846 GTGAAAAGTAAAATT-----A-AAG--TAAAAAAA-----GTTATTTTAAAG------ATT-TTTTAATGATTTGAAAATGACAT i canFam3.chr16 I 72 C 0 s dasNov3.JH570353 1346371 74 - 2520184 TTTAAAGGCAAGTATTTGGAA-AAG--TCGCATGACTTA-GGCATTTTTAGG------ACT-TTTGAGCACCTTGCAGGAGACAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e mm10.chr8 86495530 4401 - 129401213 I a score=355131.000000 s hg38.chr4_KI270789v1_alt 18285 39 + 205944 TGTCAATAA-TTTTCAAGAAGAAAC-AA-----------TGCTCTTCCCT-AA s panTro5.chr4 192810513 39 + 194502333 TGTCAGTAA-TTTTCAGGAAGAAAC-AA-----------TGCTCTTCCCT-AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695014 39 + 195804263 TGTCAGTAA-TTTTCAGGAAGAAAC-AA-----------TGCTCTTCCCT-AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732446 39 + 4876863 TGTCAATAA-TTTTCAAGAAGAAAC-AA-----------TGCTCTTCCCT-AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616836 39 + 115148730 TATCAGTAA-TTTTCAAGAAGAAAC-AA-----------CGCTCTTCCCT-AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901668 40 + 190429646 TGTCAATACTTTTTCGAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849099 40 + 189454096 TGTCAATACTTTTTCGAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230246 42 - 25927173 TGTCAATACTTTTTCGAAAGGAAACAAA-----------TGCTCTTTGCTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264654 40 + 4669795 TGTCAATACTTTTTCGAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221833 40 + 135778131 GCTCAATACTTTTTCAAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652397 40 - 2847728 TGTCAATACTTTTTCGAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784283 40 + 2368649 TGTCAATACTTTTTCAAAAGGAAAC-AA-----------TGCTCTTTGCT-AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304152 41 + 190850796 TGTCCATCCATTTTCAGGAGGGAACAAA-----------TGCTCTTTCCT-CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1219844 41 + 14256875 TGTCCATACATTTTCAAGAGGGAACAAA-----------TGCTCTTTCCT-AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270581 41 + 2196201 TGTCTATATATTTTCAAGAGGGGACAAA-----------TGCTCTTTCCT-AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710681 41 + 5030052 TGTCCATACATTTTCAAGAGGGAACAAA-----------CGCTCTTTCCT-CA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11161864 39 - 11315646 TGTCAATACTTTATCAAGAAGG-AC-AA-----------TGCTCTTTCTT-AA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86499931 35 - 129401213 TGTCAATACTTTAT----AAGACAC--A-----------CACTCTTTCCT-TA i mm10.chr8 I 4401 C 0 s canFam3.chr16 16858865 51 - 59632846 TCTCAATACTTTATCAAGAGGGAAC-AATTTTTTTTTTCTTTTTTTTCCT-AG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1346445 38 - 2520184 TGTCATTGTTTATT--AAAGGGAAC-AC-----------TGTCATTTTCT-AA i dasNov3.JH570353 C 0 I 427 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I a score=138353.000000 s hg38.chr4_KI270789v1_alt 18324 14 + 205944 TGGAAGAGTTGATC s panTro5.chr4 192810552 14 + 194502333 TGGAAGTGTTGATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695053 14 + 195804263 TGGAAGTGTTGATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732485 14 + 4876863 TGGAAGAGTTGATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616875 14 + 115148730 TGGAAGAGTCGATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901708 14 + 190429646 CAGAAGAGTTGATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849139 14 + 189454096 CAGAAGAGTTGATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230288 14 - 25927173 CAGAAGAGTTGATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264694 14 + 4669795 CAGAAGAGTTGATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221873 14 + 135778131 CAGAAGAGTTGATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652437 14 - 2847728 CAGAAGAGTTGATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784323 14 + 2368649 CAGAAGAGTTGATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304193 14 + 190850796 CGGAAGAGTTGACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1219885 14 + 14256875 TGGAAGAATTGACC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270622 14 + 2196201 TGGAAGAGTTCACC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710722 14 + 5030052 CGGAATAGTTGACC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11161903 14 - 11315646 CCAATGAATTGATC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86499966 14 - 129401213 CCCATGCCTTGAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16858916 14 - 59632846 CCAATGAGTTGATC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I e dasNov3.JH570353 1346483 427 - 2520184 I a score=891458.000000 s hg38.chr4_KI270789v1_alt 18338 98 + 205944 TGGTATATTCTAATGATCTCACTCGGAACAGTGAAATACTTAGGAGAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAT-----------------------------------------------------------GTAAAGAC-TTTTAAAAA---CTCCAGATTATAC s panTro5.chr4 192810566 98 + 194502333 TGGTATATTCTAATGATCTCACTCAGAACAGTGAAATACTTAGGAGAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAT-----------------------------------------------------------GTAAAGAC-TTTTAAAAA---CTCCAGATTATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695067 98 + 195804263 TGGTATATTCTAATGATCTCACTCAGAACAGTGAAATACTTAGGAGAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAT-----------------------------------------------------------GTAAAGAC-TTTTAAAAA---CTCCAGATTATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732499 98 + 4876863 TGGTATATTCTAATGATCTCCCTCAGAACAGTGAAATACTTAGGAGAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAT-----------------------------------------------------------GTAAAGAC-TTTTAAAAA---CTCCAGATTATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616889 97 + 115148730 TGGTATATTCTAATGATCTCACTC-GAACAGTGAGATACTCAGGAGAGAT------------------------------------------------CTTCTTA--------------TTGGACTACAC-----------------------------------------------------------ATAAAGAC-TTTAAAAAA---CCCCAAATTATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901722 98 + 190429646 TGGTATTTTCTAATGATCTCACTTGGAACAGTGAGATACTTAGGAAAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAAGAC-TTTAAAAAA---CTTCAAATTATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849153 98 + 189454096 TGGTATTTTCTAATGATCTCACTTGGAACAGTGAGATACTTAGGAAAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAAGAC-TTTAAAAAA---CTTCAAATTATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230302 92 - 25927173 TGGTATTTTCTA---ATCTCACTTGGAACAGTGAGATTATTAGG-AAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAGA---CTTAAAAAA---CTTCAAATTATAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264708 98 + 4669795 TGGTATTTTCCAATGATGTCACTCGGAACAGTGAGATACTTAGGAAAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAAAA---CTTCAAATTATAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221887 98 + 135778131 TGGTATATTCTAATGATCTCACTCGGAACAGTGAGATACTTAGGAGAGAT------------------------------------------------CTTCTTC--------------TTAGACTAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAAAA---CTTCAAATTATAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652451 98 - 2847728 TGGTATTTTCTAGTGATCTCACTCGGAACAGTGAGATACTTAGGAAAGAT------------------------------------------------CTTCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAAAA---CTTCAAATTATAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784337 93 + 2368649 TGGTATATTCTAATGATCTCACTCGGAACAGTGAGATACTTAGGAAAGA---------------------------------------------------TCTTC--------------TTGGACTAAAC-----------------------------------------------------------ATAAAGAC-TT--AAAAA---CTTCAAATTATAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304207 96 + 190850796 TGGTA--TTGCCATGATCTCTTTCGAAACAGTGAGATACTCAGGAGAGAT------------------------------------------------ATTTTTC--------------TTGGCCTAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAATA---CTCTTAATTATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1219899 96 + 14256875 TGGTA--TTCTAATGATCTCTTTCAAAACAGTGAGATACTCAGGAGAGAT------------------------------------------------ATTTTTC--------------TTGGACAAAAC-----------------------------------------------------------GTAAAGAC-TTACAAATA---CTCCAGATTATAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270636 96 + 2196201 TGGTA--TTCCAATAATCTCTTTCGAAACAGTGAGATACTCAGGAGAGAG------------------------------------------------ATTTTTC--------------TTGGACAAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAATA---TTCTGAATTATAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710736 96 + 5030052 TGGTA--TTCTAATGATCTCTTTTGAAACAGTGAGATACTCAGGAGAGAT------------------------------------------------ATTTTTC--------------TTGGCCTAAAC-----------------------------------------------------------ATAAAGAC-TTTTAAATA---CTCCGAATTATAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11161917 215 - 11315646 TTGTA--TTCCA-TGATCTCACTGGGAACCATGAGATACTTATCATAGATACTTATAATAGAACTTTTTTGGTCTCAGGGGTAcaggggtatctaaccttttttcttttctgccacacattggatgaatcagaattgttttgggTAATCTGCATGATCCACGGGCTGCAGGTTGGACCCTCTTGGTAGAATAAAGAC-TTT-AAAAA---CTTCAAATTATAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86499980 85 - 129401213 T--------------ATGTCATTT-GAATAGTGGAAATATTTTATTAGCT------------------------------------------------ACCTCGC--------------TTGGCATGAAT-----------------------------------------------------------A-AAAGAA-TTTAAAAGACCTCTCTACATTATTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16858930 91 - 59632846 TGGTA--TTCTAATCATCTCACTTGGAAGACTGAGATACTT-----AAAT------------------------------------------------ATTTTTC--------------CTGGCTTAAAT-----------------------------------------------------------GTAAAGAC-TTTTAAAAA---CTCCAAATGATAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1346910 98 - 2520184 TGAGAAATTCTAATATCCTCATTTGGAATAGCAAGATGCTTGCAATAAAA------------------------------------------------AATTTT---------------TTGGTCTAAAT-----------------------------------------------------------TTAAAGACATTTTAAAAG---CTACAAATTATGT i dasNov3.JH570353 I 427 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17457370 477 - 93316391 I a score=1298287.000000 s hg38.chr4_KI270789v1_alt 18436 96 + 205944 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGTGTCTTATAGAAGTATAATAAAAGAGCAGTCTATCATGCGT s panTro5.chr4 192810664 96 + 194502333 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGTGTCTTATAGAACTATAATAAAAGAGCAGTCTATCTTGCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695165 96 + 195804263 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGTGTCTTATAGAACTATAATAAAAGAGCAGTCTATCATGCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732597 96 + 4876863 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGACGGGACTTGTGTCTTATAGAACTATAATAAAAGAGCAGTCTATCATGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112616986 96 + 115148730 TGGTTATGACTTTTTAATAAATA-CGACTTTATTAGGTACA-TTTTGAAGGGACTTGTGTCTTATAGAACTATAATAAAAGAGCAGTCTATCACACGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901820 96 + 190429646 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGCGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849251 96 + 189454096 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGCGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230394 94 - 25927173 TGGTTATGACTTTTTAATAAATATTGACTTTATTAGATACA-TTTTGAA-GGACTTGCGTCTTCTAGAACTGTAAT-AAAGAGCAGTCTACCATGTG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264806 96 + 4669795 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGTGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134221985 96 + 135778131 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-CTTTGAAGGGACTTATGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652549 96 - 2847728 TGGTTATGACTTTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGGACTTGTGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784430 96 + 2368649 TGGTTATGACTTTTTAACAAATA-TGACTTTATTAGATACA-TTTTGAAGGGATTTGTGTCTTCTAGAACTGTAATAAAAGAGCAGTCTACCATGTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304303 93 + 190850796 TGGTTATGACTCTTTAGTAAATC-TGACTTTATTAGATACA-TTTTGAAGGGAGTTGTGTCTTATAGGATCAGAATAAAAGAGCAGTCTACCGCG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1219995 93 + 14256875 TGGTTATGACTCTTTAATAAATA-CGATTTTATTAGATACA-TTTTGAAGGAAGTTGTGTCTTATAGGACCATAATAAAAGAGCAGTCTACCGTG--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270732 93 + 2196201 TGGCTATGACTCTCTAATAAATA-TGACTTTATTAGATACA-TTTTAAAGGAAGTTGTGTCTTATGGGACCATAATAAAAGAGCAGTCTACCGTG--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710832 96 + 5030052 CAGTTATGACTCTTTAATAAATA-TGACTTTATTAGATACA-TTTTGAAGGAAGTTGTGTCCTATAGGACCATAAGAAAAGAGCAGTCTACCATGTGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17457847 96 - 93316391 TGGTTGTGACTTTTTAATAAATA-TGACTCTATTAGACACA-TTTTTAAGGGATTTATGTCTTATAGAACCAGAGTAAAAAAGCTATCAACCAAGTGT i micMur3.chr14 I 477 C 0 s otoGar3.GL873580 11162132 94 - 11315646 TGCTTGTGATATTTTGATAAATA-TAA--TTGTTAGACACA-TTTTTGAGGGATTTAGGTCTTATTGAACCAGAATAAAAAAGCAATCCACCAAGTAT i otoGar3.GL873580 C 0 I 338 s mm10.chr8 86500065 94 - 129401213 TTCTTATGACTTCTTCATAGTTC-TGGCTTGATTAGATATG-CTTTGTAGGGATCTGTCTCT--CAGAACCAGAACAGGAAAGTAATCAACGATGTCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16859021 97 - 59632846 TGGTTTTGACTTTTTTATAAATA-TGACTTCATTAAACACATTTTTGTAGGGATTTCTGTCTTATAGAACCAGAATAAAAAAGCAATCAATCATGTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1347008 92 - 2520184 TGGTTATTACTTTTTAAAAAATA-TGCCTTTATTAGACAAA--TTTGTAGGATCTTGTGTTTTGTAGAAC---AAGTGAAAAGCAATCAACCATGTGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=880455.000000 s hg38.chr4_KI270789v1_alt 18532 64 + 205944 TTTAAA-CCAGTTACTTTGAATATCAGCCTATGGCCTTTAAAGCTCTGAACAGTTAGAACTGAGC s panTro5.chr4 192810760 64 + 194502333 TTTAAA-CCAGTTACTTTGAATATCAGCCTGTGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695261 64 + 195804263 TTTAAA-CCAGTTACTTTGAATATCAGCCTGTGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732693 64 + 4876863 TTTAAA-CCAGTTACTTTGAATATCAGCCTATGGCTTTTAAAGCTCTAAACAGTTAGAACTGAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617082 64 + 115148730 TTCAAA-CCAGTTACTTTGAATATCAGCCTATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901916 64 + 190429646 TTTAAA-CCAGTTACTTTGAATGTCAGCCAATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849347 64 + 189454096 TTTAAA-CCAGTTACTTTGAATGTCAGCCGATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230488 63 - 25927173 TTTAAA-CC-GTTACTTTGAATGTCAGCTGATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3264902 64 + 4669795 TTTAAA-CCAGTTACTTTGAATGTCAGCCGATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222081 63 + 135778131 TTTAAA-CCAGTGACTTTGAGTGTCAG-CGACGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652645 64 - 2847728 TTTAAA-CCAGTTACTTTGAATGTCAGCCGATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784526 64 + 2368649 TTTAAA-CCAGTGACTTTGAATGTCAGCCGATGGCTTTTAAAGCTCTGAACAGTTAGAACTGAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304396 62 + 190850796 --TAAA-CCAGTTACTTTGAATATCAGCCTGTGACTTCTGAAGCTCTGAACAGTCAGAGCTGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220088 62 + 14256875 --TAAA-CCAGTTACTTTGAATATCAGCCTATGGCTTTTGAAGCTCTGAACAGTTAGAGCTGAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270825 62 + 2196201 --TAAA-CCAGTTAATTTGAATATCAGCCTATGGCTTTTGAAGCTCTGAACAGTTAGCGCTGAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710928 64 + 5030052 TTTAAA-CCAGTTACTTTGAGTATCAGCCTATGGCTTTTGAAGCTCTGAACAGTTAGAGCTGAGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17457943 64 - 93316391 TTCAAA-CTAGTTACTTTGAATATCAATCTATGTCTTTTAAAGCTCTGAACAGTTAAAGCTGAGC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11162564 64 - 11315646 TTCTAG-CCAGTTACTTTGAATATCAGCCTTTGGTTAAAAAAGTTCTGAACACTTAGCACTGAGC i otoGar3.GL873580 I 338 C 0 s mm10.chr8 86500159 64 - 129401213 TTCAAATTCAGATGCTTAGAATATCAATGGATGGCTGAT-AAGTTCAGAAGTGATAAGTCTGTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16859118 64 - 59632846 TTCAAA-CCAGTTGCATTGAATATCCATTTATGGCTTTGAAAGCTCTAAACAGTTAAAGCCGAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1347100 63 - 2520184 TGCAAA-CAAGGTGCTAT-AAGAGCAGCCTATGGCTTTTAAAATTCTCAGATGCTGGGTGTAAGT i dasNov3.JH570353 C 0 I 702 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=1978600.000000 s hg38.chr4_KI270789v1_alt 18596 145 + 205944 TGTATTTCTGTAATTGAAGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACCGAGGC-ACA-TGCA-AATGGGCAGAAATTTCACATCCAATCATTGTACAACAGGAGAAAATTCTGC s panTro5.chr4 192810824 145 + 194502333 TGTATTTCTGTAGTTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACGGAGGC-ACA-TGTA-AACGGGCAGAAATTTCACATCCAATCATTGTACAAGAGGAGAAAATTCTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695325 145 + 195804263 TGTATTTCTGTAGTTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACGGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAATCATTGTACAAGAGGAGAAAATTCTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732757 145 + 4876863 TGTATTTCTGTAATTGAAGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTACAGTTATCACGGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAATCATTGTACAACAGGAGAAAATTCTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617146 145 + 115148730 TGTATTTCTATAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACGGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAATCATTGTACAAGAGGAGAAAATTCTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188901980 145 + 190429646 TGTATTTCTGAAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACAGGCAGAAATTTCACATCCAGTCATGGTACAAGAGGAGAAAATTCTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849411 145 + 189454096 TGTATTTCTGAAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACAGGCAGAAATTTCACATCCAGTCATGGTACAAGAGGAGAAAATTCTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230551 143 - 25927173 TGTATTTCTGAAA-TGATGGACTGTCCACA-TGGCC--TAGAGCACA-TCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGCAACATTGCA-AACAGGCAGAAATTTCACATCCAGTCATGGTAC-AGAGGAG-AAATTCTGC i macNem1.NW_012013133v1 C 0 I 30 s cerAty1.NW_012001672v1 3264966 145 + 4669795 TGTATTTCTGAAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAATCATGGTACAAGAGGAGAAAATTCTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222144 146 + 135778131 TGTATTTCGGTAATTGATGGACTGTCCACATTGGCC--TAGAGCACATTCAAATGATGCTGCTAAAGAAACTTCTAGTTATCACAGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAATCGTGGCACAAGAGTAGAAAATTCTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652709 145 - 2847728 TGTATTTCTGAAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACGGGCAGAAATTTCACATCCAGTCATGGTACAAGAGGAGAAAATTCTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784590 145 + 2368649 TGTATTTCTGTAATTGATGGACTGTCCACA-TGGCC--TAGAGCACATGCAAATGATGCTCCTAAATAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACGGGCGGACATTTCACATCCAATCATGGCACAAGAGGAGAAAATTCTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304458 145 + 190850796 TGCATTTCTGTAACTGATGAACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATTCTCCTAAGTAAGCTTCCAGTTATCACAAAGTC-ACA-TGCA-AACGGGCAGCAATTTCACATTCAATCATTGTGCAAGAGGAGAAGATTCTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220150 145 + 14256875 TGTATTTCTGTAACTGATGAACTGTCCACA-TGGCC--TAGAGCATATTGAAATGATTCTCCTAAGTAAGCTTCCAGTCATCACAGAGGC-ACA-TGCA-AACGGGCAGCAATTTCACATTCAATCATTGTACAAGAGGAGAAGGTTCTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1270887 144 + 2196201 TGTATTTCTGTAACTGATGAACTGTCCACA-TGGCC--TGGAGCACATTCCAATGATTCTCCTAAGTAAGCTCCCTGTTATCACAAAGGC-ACA-TGCA-AACGGGCAGCAATTTCACA-TCAATCATTGTACAAGAGGAGAAGATTCTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1710992 145 + 5030052 TGTATTTCTGTAACTGATGAACTGTCCACA-TGGCC--TAGAGCACATTCAAATGATTCTCCTAAGTAAGCTTCCAGTTATCACAGAGGC-ACA-TGCA-AACAGGCAGCAATTTCACATTCAATCATTGTACAAGAGGAGAAGATTCTGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17458007 144 - 93316391 TGTATTTCTATAACTGATGGACTGTCCACA-TGGCC--TAGAGGGCATTCAAATGCTGTTCCTAAATAAGTTCCTAGTTACAGCAGAGAC-ACA-TGCA-GAAGGGCAGGAATTTCACATTCAGTCAGAATACAGGAGGAGAAAATCTGC- i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11162628 143 - 11315646 CATCTGTCTGTAACTGATGCACTGTCCATG-TGGCC--CGGGGGGAATTCAAGTGATGTTCCTAAACAAGTTTCTACTTACAACAGAGGC-ACA-TGCC--AAGGGCAAGGATTTCCCATTCAGTCGGAGCACAGAAGGAGAAAATTCAC- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500223 132 - 129401213 AGTATTCTGGTGTCTGAT-----------A-TAG----TAGAGTAGGTTAGAATGTCACTCTTAAAT-GGCTTCCAGTTATAACACAGGC-ATG-GGCAAAAAGGGTAGGAAATTCACATTCAAGCACAGTACAGTGAAAGAAAATTCTCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16859182 146 - 59632846 CTCCTTCCTGTAACTGATGGACTGTCTGCA-TGGACTTTAAAGCTCATTCAAATGATGCTCCTAAATAAGCTTCCAGTTATAGTGGAGGC-ACA-TGCA-AAAGAGCAG-GATTTCACATTCAATCAGAGTACAGGAGAAGAGAATTCTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1347865 144 - 2520184 TGTGTTTCTGTAGCTAAGGTACTGTACCCC-TGAAC--TAGCATGCACACAAA-GATATCCCAAAATAAGCTTCCAAGTGTAACAGAGGC-ACA-TGAA-AAGGGGCAAGAATTGCACACTCAGTCAGAGTGTAGGAGGAGAAAATTCTTC i dasNov3.JH570353 I 702 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=367612.000000 s hg38.chr4_KI270789v1_alt 18741 26 + 205944 TTGTATAATAGAAATGATAACCTTGA s panTro5.chr4 192810969 26 + 194502333 TTGTATAATAGAAGTGATAACCTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695470 26 + 195804263 TTGTATAATAGAAATGATAACCTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732902 26 + 4876863 TTGTATAATAGAAATGATAACCTTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617291 26 + 115148730 TTGTATAATGGAAATGATAACCTTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902125 26 + 190429646 TTGTATAATGGAAATGATAACCTTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849556 26 + 189454096 TTGTATAACGGAAATGATAACCTTGA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3265111 26 + 4669795 CTGTATAACAGAAATGATAACCTTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222290 26 + 135778131 TTGTGTAACGGAAATGATAACCTTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652854 26 - 2847728 TTGTATAACGGAAATGATAACCTTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784735 26 + 2368649 TTGTATAACGGAAATGATAACCTTGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304603 26 + 190850796 ATGTCTAATGGAAACGATAACCTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220295 26 + 14256875 ATGTCTAATGGAAATGATAACCTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271031 26 + 2196201 ATGTCGAATGGAAATGATAACCTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711137 26 + 5030052 ATGTCTAATGGAAATGATAACCTTAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17458151 26 - 93316391 TTATATAATAGAAATGATAACCTTGA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11162771 26 - 11315646 TTACATAATGGAAATGATAACCTTGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500355 26 - 129401213 CTGTATAATGGAAATGATAACCTTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16859328 26 - 59632846 CTGTATAATGGAAATGATAACCTTGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348009 26 - 2520184 CTATGTGTGGGAAGTGATAACCTTGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e macNem1.NW_012013133v1 24230694 30 - 25927173 I a score=4094713.000000 s hg38.chr4_KI270789v1_alt 18767 299 + 205944 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATGTGACGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGCGAAA-GAGGATCTAGATGGTCA--TTCCAAG-TCCTATGTAGCCTGTTTATCATCCCCATTTTACATTTAAATGTATGCAATAGGTGTCT-TTACATGAGTAGACTTT-AAATATAGGTAATTTATAGGCACAATTCTTTAC-AAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCCATTGCACAGT s panTro5.chr4 192810995 300 + 194502333 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATGTGACGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGCGAAA-GAGGATCTAGATGGTCA--TTCCAAG-TCCTATGTAGCCTGTTTATCATCCCCATTTTACATTTAAATGTATGCAATAGGTGTCT-TTACATGAGTAGACTTT-AAATATAGGTAATTTATAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695496 300 + 195804263 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATGTGACGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGCGAAA-GAGGATCTAGATGGTCA--TTCCAAG-TCCTATGTAGCCTGTTTATCATCCCCATTTTACATTTAAATGTATGCAATAGGTGTCT-TTACATGAGTAGACTTT-AAATATAGGTAATTTATAGGCACGATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3732928 300 + 4876863 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCAAAACCTGTCATGTGATGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGCGAAA-GAGGATCTAGATGGTCA--TTCCAAG-TCCTATGTAGCCTGTTTATCATCCCCATTTTACATTTAAATGTATTCAATAGGTGTCT-TTGCATGAGTAGACTTT-AAATATAGGTAATTTATAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617317 300 + 115148730 AATTCTTAAGCACTCATATTTGAGGAAAGCAAAAAGACCCGAAACCCGTCATGTGACGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGAGAAA-GAGGATCTAGATGGTCA--TTCCAAG-TTCTGTGTAGCCTGTTAATCATCCCCATTTTACATTTAAACGTATGCAATAGGTGTCT-TTACATGAGTGGACTTT-AAATATAGGTAATTTGCAGGCACAATTCTTTACCAAATATTTAAACACGATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902151 300 + 190429646 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATATGATGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTCA-TTTCAT-GGGATATAGCAAAA-GAGGATCTAGATGATCA--TTCCAAG-TTCTATGCAGCTGGTTAATCATCCCCATTTTATATTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187849582 300 + 189454096 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATATGATGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTCA-TTTCAT-GGGATCTAGCAAAA-GAGGATCTAGATGATCA--TTCCAAG-TTCTATGCAGCTGGTTAATCATCCCCATTTTATATTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24230724 300 - 25927173 ATTACTTGAGACTTCATCTTTGGGGAAAGCAGAAGCA-CCGAAACCTATCATATGATGAGCCCGTGCGAAG-CCTAGGATCACAGGGCAGCATTCATTTTCATCGGCGTCTAGCAAAACGGAGATCTAGATGATCATGTTCCAAG-TTCTATGCAGCTGGTTAATCATCCCCATTTTAT-TTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGG-TTT-AAATAT-AGTAA-TTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAA-T-ATTCAAGG-TTTATCCTATTGCACATT i macNem1.NW_012013133v1 I 30 I 306 s cerAty1.NW_012001672v1 3265137 301 + 4669795 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATATGATGAGCCCGT--GAAGCCCTAGAATCACAGGGCAGCATTCA-TTTCAC-GGGATCTAGCAAAA-GAGGATCTAGATGGTCA--TTCCAAG-TTCTATGCAGCTTGTTAATCATCCCCATTTTACAGTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222316 300 + 135778131 AATACTTGAGCACTTATTTTTGAGGAAAGCAGAGAGACCCGAAACCTATCATATGATGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTAA-TTTCAT-GGGATCTAGCAAAA-GAGGATCTAGATGGTCA--TTCCAAG-TTCTATGCAGCTTGTTAATCATCCCCATTTTACATTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2652880 300 - 2847728 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGACCCGAAACCTATCATATGATGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTCA-TTTCAT-GGGATCTAGCAAAA-GAGGATCTAAATGATCA--TTCCAAG-TTCTATGCAGCTTGTTAATCATCCCCATTTTACATTTAAATGTATGCAATAGGTGTCT-TTACATGAGAAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 784761 300 + 2368649 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAGCCCCGGAACCTATCATATGACGAGCCCGT--GAAG-CCTAGAATCACAGGGCAGCATTGA-TTTCAT-GGGATCTAGCAAAA-GAGGATCTAGATGGTCA--TTCCAAG-TTCTATGCAGCTGGTTAATCATCCCCATTTTACATTTAAATGTATGCAACAGGTGTCT-TTACATGAGTAGGCTTT-AAATATAAGTAATTTGTAGGCACAATTCTTTACCAAATATTTAAACACAATGTCTAAAATT-ATTCAAGGTTTTATCCTATTGCACATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1304629 284 + 190850796 AATACCTGAGCACTCATCTTTGAGGAAAGCAGAAAAACCCAAAGCCTATCCTGT-ATGAGCCCAC--GAAG-CCTAGAGTCACAGGGCAGCACTAA-CTCCAC-GG----------------GATCTAGGTGGTCA--TTCCAAA-TTCTACAGAGCCTGTTAATCAGCCCCATTTTACATTTGCATATATGCAATAGATCTCT-TTATATCAGTAGACTTT-AAATACAGGTAATTTGTAGGCACAATTCTTTACAAAATATTTAAACATAATTTCTAAAATT-ATTCAAGGTTTTATCCTATCACACAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220321 282 + 14256875 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAAACCCAAAGCCTATCCTAT-ATGAGCACAA--GAAG-CCTAGAGTCAC--GGCAGCATTGA-TTCCAT-GG----------------GATCTAGATGGTCA--TTCCAAA-TTCTACGTAGCCTGTTAATCGTCCCCATTTTACATTTACAGATGTGCAATAGGTCTCT-TTATATCAGTAGACTTT-AAATACAGGTAATTTGGAGGCACAATTCTTTACAAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTATCGCACAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271057 280 + 2196201 AATACTTGAGCCCTCATCTTTGAGGAAAGCAGAAAAACCCAAAGCCTATCCTAT-ATGAGCCCAC--GAAG-CCTAGAGTCAC--GGCAGCATTAA-TTCCAT-GG----------------GATCTAGATGGTCA--TTCCGAA-TTCTATGTGGCCTGTTAATCATCCTCATTTTACATTTACATATGTGCAATAGGTCTCT-TTATATCAGTAGACTTT-AAATATAGGTAATTTGTAGGCACAATTCTTTACAAAATATTTAAAC--AGTTTCTAAAATT-ATTCAAGGTTTTGTCCTATCGCACAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711163 284 + 5030052 AATACTTGAGCACTCATCTTTGAGGAAAGCAGAAAAACCCAAAGCCTATTCTAT-ATGAGCCCAC--GAAG-CCTAGAGTCACAGGGCAGCATTAA-TTCCAT-GG----------------GCCCTAAATGGTCA--TTCCGAA-TTCTACGTAGCTGGTTAATCATCCCCATTTTACATTTACATATGTGCAATAGGTCTCT-TTATATCAGTAGACTTT-AAATATAGGTAATTTGTGGGCACAATTCTTTACAAAATATTTAAACACAATTTCTAAAATT-ATTCAAGGTTTTATCCTGTCGCACAGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17458177 300 - 93316391 AATACTTGAGCACTCATCTTTGAGAAAAGGAGAAAGGCCCAAGTCCTATAATATGATGAGCCCGT--GAAG-CCTAAAATCACAGAGTAGCCTTAA-TTTCAT-GCAATCTAACAGAA-GAGGATCTAGATGGTCA--TTCTAAG-TTCTAAGTACCCTATTAATCATCCTCATTTTACATTTAAATTTGTGTAATAGGCATCC-TTAAGTGAGTTGATTTT-AAATATAGGTAATTTGCAGGCAAAATTCTTTACACAATATTTAAACACAACTTCTAAAATT-ATTCAAGCTTTTATCCTATTGCACAGC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11162797 300 - 11315646 AATACTTGAGCACTCATCTTTGAGAGAAGCAGGAAGATTCAAATCCTATAACTTGCTGAACCCGT--GAAA-CCTACAATCACAGGGTCACCTTAA-TTTCAT-GGAATCTAGCAGAA-GAGGATCTGGTTGGTCG--CCCCAAG-TTCTAAGTAGCC-ATTAATCATCCCAATTTCATGTTTAAATTTATGCAATAGGCATCCATTACATGAGTAGATTTT-AAATATAGGTAATTTTTAGGCACAGCTCTTTACACAATATTTAAACACAACTTCTGAAATT-ATTCAAGATCTGATCTTATTGCACAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500381 292 - 129401213 AATACTCAAGTGCTCATCATTGAGAAAAGCAGAAAGTGCCAAATCCCATAATGTGGCAAAGCCAT--GAAG-CTCAGCACTGAATAGTATTTTCAA-TTTTCT-AGCATCTAGCTGAA-GAGCATCTAGATGGTCA--CTTCAAA-TCCTAAGCAGCCTATTAATCACCCTCATTTTGTATTTAGATTAATGCATTATGTGTAT-TTATAGAAGAAGCTTTTAAAATATAACTAATTTGTGGGCATAACTTT--------TACTCAAACACAATTTCTAAAGTT-ATTTAAGGTTTTATCCTATTGCATGG- i mm10.chr8 C 0 C 0 s canFam3.chr16 16859354 300 - 59632846 AATACTTGAGCAATCACCCTTGAGAAAAGCAAAAAGACCCAAATACTAAAATATGATGAGCCCGT--GAAG-CCCAGAATTATAGAGTAGCTTTAA-TTTCAT-GGCAGCTGACAGAA-GAGCCTC-AAATGGTCA--CTCCAAACTCCTAAGTAGCTTGTTAATCATCCTCATTTTATATTTAAATTCATATAGTAGGCATCT-TTACATGAGTGGTCCTT-AAATACAGGTAATTTGTTGGCACAATTTGTTACAAACTGTTTAAACACAATTTCTAAAATT-ATTTGAGGTTTTATCCTATTGCACAGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348035 298 - 2520184 AATACTTGGGCGCTTATCCCTGAGAAAAGCAGAAAGACCC-AATCCTCTAAAGTGATGTGCCCAT--GAAG-CTCAAAATCCTAGGGTAGCTTTCA-TTTCAT-GGCATCTGACAGAG-GAGCTTATAGACGGTAA--CTGCAAA-TACTCAGTGGCCAGTTAATCAACCTTATTTTACATTTAAATTCATATAGTAGATATCT-TTGTATGAGTAGATTTT-CAATATAGGCAATTTGTAACCATAATTCTTTACAAAATATTTGAACAT--TTTCTAATATTAAGTCAAGGTTTAATCCTATTACAGAAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=2488901.000000 s hg38.chr4_KI270789v1_alt 19066 156 + 205944 TAGACTCTATTTCAGTTGAAAAATACACGTCAAATTGAAAGGTGTGAAATTATTTTTTTAAGCCGGTACTATAAA-TTATATGCCAGAAATATATGGTCACTT-TCTCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACTTTTCT s panTro5.chr4 192811295 156 + 194502333 TAGACTCTATTTCAGTTGAAAAATACACGTCAAATTGAAAGGTGTGAAATTATTTTTTTAAGCCGGTACTATAAA-TTATATGCCAGAAATATATGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACTTTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695796 156 + 195804263 TAGACTCTATTTCAGTTGAAAAATACACGTCAAATTGAAAGGTGTGAAATTATTTTTTTAAGCCGGTACTATAAA-TTATATGCCAGAAATATATGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACTTTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733228 156 + 4876863 TAGACTCTATTTCAGTTGAAAAATACACGTCAAATTGAAAGGTGTGAAATTATTTTTTTAAGCCGGTACTATAAA-TTATATGCCAGAAATATATGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACTTTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617617 156 + 115148730 TAGACTCTATTTCAGTTGAAAAATACACGTCAAATTGAAAGGTGTGAAATTATTTTTTTAAGCTGGTACTATAAA-TTATATGCCAGAAATATATGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACTTTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902451 156 + 190429646 TAGACTGTATTTCAATTGAAAAGTGCACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTACTATAAATTTATATGCCAGAAATATAGGGTCACTT-TCCCTAGTCATAGCAAACGTTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTTT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187849882 156 + 189454096 TAGACTGTATTTCAATTGAAAAGTGCACGTCAAATTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTACTATAAATTTATATGCCAGAAATACAGGGTCACTT-TCCCTAGTCATAGCAAACGTTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTTT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24231330 156 - 25927173 TAGACTGTATTTCAATTGAAAAGTGCACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTACTATAAATTTATATGCCAGAAATATAGGGTCACTT-TCCCTAGTCATAGCAAACGTTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTTT i macNem1.NW_012013133v1 I 306 I 1 s cerAty1.NW_012001672v1 3265438 156 + 4669795 TAGACTCTATTTCAATTGAAAAGTGCACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTACTATAAATTTATATGCCAGAAATATAGGGTCACTT-TCCCTAGTCATAGCAAACATTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTTT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134222616 155 + 135778131 TAGACTCTATTTCAGTTGAAAAGTACACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTACTATAAA-TTATATGCCAGAAATCTAGGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTTT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2653180 156 - 2847728 TAGACTCTATTTCAATTGAAAAGTGCACGTCAAGTTGAAAGGTATGAAATTA-TTTTTTAAGCCGGTACTATAAATTTATATGCCAGAAATATAGGGTCACTT-TCCCTAGTCATAGCAAACGTTCAGGCACCAAGTTAACTTTTTAAAA--ACCTTTTT i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 785061 152 + 2368649 TAGAC--TATTTCAGTTGAAAAGTACACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCGGTAA-ATAAA-TTATATGCCAGAAATATAGGGTCAGTT-TCCCTAGTCATAGCAAACGTTCAGGTACCAAGTTAACTTTTTAAAA--ACCTTTCT i colAng1.NW_012116221v1 C 0 I 713 s calJac3.chr3 1304913 155 + 190850796 TAGACTCTATTTCAGCTGAAAAATACAGGTCGAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCTGGTACTGTAAA-TTATATGCCAGAAATACAGGGTCACTT-TTCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTAAAGA--ACTTTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220603 155 + 14256875 TAGACTCTATTTCAGCTGGAAAATACACATCAATTTGAAAGGTGTGAAATTA-TTTTTTAAGCTGGAACTATAAA-TTATATGCCAGCAATATAGGGTCACTT-TTCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTAAAGA--ACTTTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271337 155 + 2196201 TAGACTCTATTTCAGCTGAAAAATACACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCTGGTACTGTAAA-TTGTATGCCAGAAACATAGGGTCCCTT-TTCCTAGTCACAGCAAATGTTCAGGTACCAAGTTAACTTTTAAAGA--ACTGTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711447 155 + 5030052 TAGACTCTATTTCAGCTGAAAAATACACATCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCTTGTACTATAAA-TTATATGCCAGAAATATAGGGTCACTT-TTCCTAGTCATAGCAAATGTTCAGGTACCAAGTTAACTTTTAAAGA--ACTTTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17458477 155 - 93316391 TAGATTTCATTTCAGTTGCAAAATACACGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCTGGTGCTATAAA-TTATATGCCAGAAATACAGGGTCACTT-TCCCCAGTCATAACAAATGTTCAGGTACCAAGTTAACTTTTTGAAA--ATACTTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11163097 156 - 11315646 TAGATTTCATTTCAGTTGCATAATACATGCCAAGTTGAAAGGTGTGAAATTATTTTTTTGAGTTGGTGCTATAAA-TTATATGCCAGAAATATAGGGTCACTT-TCCCTAGTCATAGCAAATGTTCAGGTTCTGAGTTAACTTTTTGAAA--ACACTTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500673 158 - 129401213 TAGACTCCATTTCAGTTGGAGAATGCATGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCTGCTACTATAAA-TTATATTCCAGAAATATATGGTCTCTTCTTCTTAGTCATAGCAAATGTTTAGGTACCAACTTCACTTTTAGAAAGGACACTTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16859654 154 - 59632846 TAGATTCCATTTCAGTTGCAAAATACATGTCAAGTTGAAAGGTGTGAAATTA-TTTTTTAAGCCAGTACTATAAA-TTATATGCCAGAAATACAGGGTCACTT-TCCCTAGTCATAGC-GATGTTCAGGTACCAAGTTAACTTTTAGAAA--ACGTATTT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1348333 157 - 2520184 TAGACTCCATTTCAATTGCAAAATACATGTCAAATTGAATGGTGTGAAATTA-TTTTTTAAGCCAGTACTATAAA-TTATATGCCAGAAATATAGTGTGACTT-TCCATAGTCAGAGCGAATGTTCAGATACCAAGTCAACTTTTTGAAAGTACACTTTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=726622.000000 s hg38.chr4_KI270789v1_alt 19222 53 + 205944 AGAAGATCCATGGAAATCAGCTGTCACACTGCAACAGGACTCAGGAGGCCTAA s panTro5.chr4 192811451 53 + 194502333 AGAAGATCCATGGAAATCAGCTGTCACACTGCAACAGGACTCAGGAGGCCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192695952 53 + 195804263 AGAAGATCCATGGAAATCAGCTGTCACACTGCAACAGGACTCAGGAGGCCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733384 53 + 4876863 AGAAGATCCATGGAAATCAGCTGTCACACTGCAACAGGACTCAGGAGGCCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617773 53 + 115148730 AGAAGATCCATGGAAATCGGCTGTCACACTGCAACAGGACTCAGGAGGCCTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902608 53 + 190429646 AGAAGATCCATGGAAATCAGCTGTCACACTGCAGCAGGACTCAGGAGGCCTAA i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187850039 53 + 189454096 AGAAGATCCATGGAAATCAGCTGTCACACTGCAGCAGGACTCAGGAGGCCTAA i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24231487 53 - 25927173 AGAAGATCCATGGAAATCAGCTGTCACACTGCAGCAGGACTCAGGAGGCCTAA i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3265595 53 + 4669795 AGAAGATCCATGGAAATCAGCTGTCACACTGCAGCAGGACTCAGGAGGCCTAA i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134222772 53 + 135778131 AGAAGATCCATGGAAATCAACTGTCACACCGCAGCAGGACTCAGGAGGCCTAA i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2653337 53 - 2847728 AGAAGATCCATGGAAATCAGCTGTCACACTGCAGCAGGACTCAGGAGGCCTAA i manLeu1.NW_012102221v1 I 1 C 0 s calJac3.chr3 1305068 53 + 190850796 AGGAGATCCATGGAAATCGGCTGTCACACTGCCACAGGACTCAGGAGGCATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220758 53 + 14256875 AGGAGATCCATGGAAACCAGCTGTCACACTGCTACAGGACTCAGGAGGCGTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271492 53 + 2196201 AGGAGATCCATGGAAACCGGCTGTCACACTGCCACAGGACTCAGGAGGCGTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711602 53 + 5030052 AGGCGATCCATGGAAACTGGCTGTCACACTGCCACAGGACTCAGGAGGCGTAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17458632 53 - 93316391 AGAGGATTCATGGAAATCTACTGTCACACTATAGGTGGACTCAGGAGGCCTAA i micMur3.chr14 C 0 I 342 s otoGar3.GL873580 11163253 53 - 11315646 AGGGGCTACATGGAAATCAACTGTCACACTGCAGGAGGATTCAGGAGGCCTAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500831 52 - 129401213 AGAAGATAC-TAGACATCAACTGTCACACTGAATGGGTACTTGGAAACTCCAA i mm10.chr8 C 0 I 4 s canFam3.chr16 16859810 53 - 59632846 AGAGGATACATGGAAATCAACTGTCACACTGAAGCAGGACCCAAGCAGCCTAA i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1348490 53 - 2520184 AGATGGTAAATGAAAATGAACAGTTACACTGCAGCAGGACCCAAGCAGGCTAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=450656.000000 s hg38.chr4_KI270789v1_alt 19275 46 + 205944 TAT----GTGCAT---TCCTGATATATTCAGCTGTTTTAATATA----AGGTAGAGT s panTro5.chr4 192811504 46 + 194502333 TAT----GTGCAT---TCCTGATATATTCAGCTGTTTTAATACA----AGGTAGAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696005 46 + 195804263 TAT----GTGCAT---TCCTGATATATTCAGCTGTTTTAATACA----AGGTAGAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733437 46 + 4876863 TAT----GTGCAT---TCCTGATATATTCAGCTGTTTTAATATA----AGGTAGAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617826 46 + 115148730 TGT----GTGCAT---TCCTGATATATTCAGCTGTTTTAATATA----AGGTAGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902661 46 + 190429646 AAT----GTGCAT---TCCTGATATATTAAGTTGTTTTAATATA----AGGTAGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850092 45 + 189454096 AAT----GTGCAT---TCCTGCTATATTAAGTTGTTTTAATATG----AGGT-GAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231540 46 - 25927173 AAT----GTGCAT---TCCTGATATATTAAGTTGTTTTAATATA----AGGTAGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265648 46 + 4669795 AAT----GTGCAT---TCCTGATATATTAAGTTGTTTTAATATA----AGGTAGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222825 46 + 135778131 AAT----GTGCAT---TCCTGATATATTCAGTTGTTTTAATATA----AGGTAGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653390 46 - 2847728 AAT----GTGCAT---TCCTGATATATTAAGTTGTTTTAATATA----AGGTAGAGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305121 46 + 190850796 AAT----GTGCAT---TCCTGATATATCCAGTTGTTCTGATAca----gggtagagt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220811 46 + 14256875 AAT----GTGCAT---TCCTGACACATCCAGTTGTTTTGACAca----gggcagagt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271545 46 + 2196201 AAT----GTGCAT---TCCTGACATATCCAGTTGTTTTGATAca----gggtagagt i cebCap1.NW_016107886v1 C 0 I 65 s aotNan1.NW_018492112v1 1711655 46 + 5030052 AAT----GTGCAT---TCCTGATATATCCAGTTGTTTTGATACA----GGGTAGAGT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11163306 53 - 11315646 AAT----ATGGATACATTCTGGTATATTCAGTTATTTCCACATCGCCTGggcaggga i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500887 42 - 129401213 CAA----ATAGAT---TCTT----TATGCAATTATTTCCATAAC----AGGTTGGCT i mm10.chr8 I 4 C 0 s canFam3.chr16 16859863 50 - 59632846 AATATTAATGTAT---TCTTGATAGAGTCAGTGATTTCCATAca----gggtagggt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348543 50 - 2520184 AATATTGATGCAT---TCCTGATATACTTAGTAATTATCTTATA----GGATAGAGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=74376.000000 s hg38.chr4_KI270789v1_alt 19321 8 + 205944 AATACAGT s panTro5.chr4 192811550 8 + 194502333 AATACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696051 8 + 195804263 AATACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733483 8 + 4876863 AATACAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617872 8 + 115148730 AACACAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902707 8 + 190429646 AACACAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850137 8 + 189454096 AACACAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231586 8 - 25927173 AACACAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265694 8 + 4669795 AACACAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222871 8 + 135778131 AACACACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653436 8 - 2847728 AACACAGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305167 8 + 190850796 aataccat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220857 8 + 14256875 aacacact i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1711701 8 + 5030052 AATACAGT i aotNan1.NW_018492112v1 C 0 I 43 s otoGar3.GL873580 11163359 8 - 11315646 catgcaat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500929 8 - 129401213 AACATAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16859913 8 - 59632846 aatatact i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348593 8 - 2520184 AATACAGG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=244676.000000 s hg38.chr4_KI270789v1_alt 19329 29 + 205944 AGAAAACAGACTACATA--TGGAGTCAGAAC s panTro5.chr4 192811558 29 + 194502333 GGAAAACAGACTACATA--TGGAGTCAGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696059 29 + 195804263 GGAAAACAGACTACATA--TGGAGTCAGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733491 29 + 4876863 GGAAAACAGATTACATA--TGGAGTCAGAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617880 29 + 115148730 GGAAAACAGACTGCAGA--CGGATTCAGAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902715 29 + 190429646 GGAAAACAGACTGCATA--GGGAGTCAGAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850145 29 + 189454096 GGAAAACAGACTGCATA--GGGAGTCAGAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231594 29 - 25927173 GGAAAACAGACTGCATA--GGGAGTCAGAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265702 29 + 4669795 GGAAAACAGACTGCATA--GGGAGTCAGAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222879 29 + 135778131 GGAAAACAGACTGCGTA--TGGAGTCCGAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653444 29 - 2847728 GGAAAACAGACTGCGTA--GGGAGTCAGAAC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305175 29 + 190850796 ggacagcagacggcacg--cggagtcagaac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220865 29 + 14256875 ggacaacagacagcacg--cggagtcagaac i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11163367 29 - 11315646 ggaaaacaggctgcacg--tggagtcagacc i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86500937 28 - 129401213 -GGAAAAGGATTATAAG--TGAACTCAGAAC i mm10.chr8 C 0 I 546 s canFam3.chr16 16859921 29 - 59632846 aaaggacaggctgcaca--tagagtcagaac i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348601 31 - 2520184 GGAAAGAATACTTCAGATCTGGAGTCAGAAC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=10500.000000 s hg38.chr4_KI270789v1_alt 19358 1 + 205944 C s panTro5.chr4 192811587 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696088 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733520 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617909 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902744 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850174 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231623 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265731 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222908 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653473 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305204 1 + 190850796 c i calJac3.chr3 C 0 I 11 s saiBol1.JH378165 1220894 1 + 14256875 c i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16859950 1 - 59632846 c i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348632 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163396 0 - 11315646 C a score=7847.000000 s hg38.chr4_KI270789v1_alt 19359 1 + 205944 A s panTro5.chr4 192811588 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696089 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733521 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617910 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902745 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850175 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231624 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265732 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134222909 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653474 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 1220895 1 + 14256875 g i saiBol1.JH378165 C 0 I 10 s otoGar3.GL873580 11163396 1 - 11315646 a i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16859951 1 - 59632846 a i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348633 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=7468.000000 s hg38.chr4_KI270789v1_alt 19360 32 + 205944 TATG----CAGCTTTCTTCACTCAGTGTTTT-------------------------------------------------------------------------------------T-AAAA s panTro5.chr4 192811589 100 + 194502333 TATG----CAGCTTTCTTCACTCAatgttttaaatttttttaaaacattttt-----------------aaaatttgttttaaaaaatgtttttaaaacatttttaaaaaatgtttt-aaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696090 102 + 195804263 TATG----CAGCTTTCTTCACTCAATGTTTTAAATtttttaaaaacatttttaaaatttgttttaaaaaaa----------------tgtttttaaaacatttttaaaaaatgttttaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733522 76 + 4876863 TATG----CAGCTTTCTTCACTCAATGTTTT--------TAAAAACATTTTtttaaa------------aa----------------tgttttaaaaatattt-----aaatgtttt-aaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617911 46 + 115148730 TATG----CAGCTTTGTTCACTCaatgtttt--------taaaaacattttt-----------------aa-----------------------------------------------aaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902746 32 + 190429646 TAAG----CAGCTCTGTTCACTCAATGtttt--------taaaa------------------------------------------------------------------------------ i rheMac8.chr5 C 0 I 61 s macFas5.chr5 187850176 32 + 189454096 TAAG----CAGCTCTGTTCACTCaatgtttt--------taaaa------------------------------------------------------------------------------ i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24231625 32 - 25927173 TAAG----CAGCTCTGTTCACTCAATGTTTT--------TAAAA------------------------------------------------------------------------------ i macNem1.NW_012013133v1 C 0 I 61 s cerAty1.NW_012001672v1 3265733 32 + 4669795 TATG----CAGCTCTGTTCACTCAATGTTTT--------TAAAA------------------------------------------------------------------------------ i cerAty1.NW_012001672v1 C 0 I 51 s chlSab2.chr7 134222910 32 + 135778131 TATG----CAGCTCTGTTCACTCaatgtttt--------taaaa------------------------------------------------------------------------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653475 32 - 2847728 TATG----CAGCTCTGTTCACTCAATGTTTT--------TAAAA------------------------------------------------------------------------------ i manLeu1.NW_012102221v1 C 0 I 61 s otoGar3.GL873580 11163399 36 - 11315646 tctgagctcaggtttgttaatttaatttttt--------taaag------------------------------------------------------------------------------ i otoGar3.GL873580 I 2 I 9 s canFam3.chr16 16859952 9 - 59632846 ----------gatctg-------agt------------------------------------------------------------------------------------------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1348634 23 - 2520184 ------------TTTTTTCACTTCAGGTTTT--------TAAA------------------------------------------------------------------------------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=4090.000000 s hg38.chr4_KI270789v1_alt 19392 10 + 205944 ---TGTTTAAAAA s panTro5.chr4 192811689 10 + 194502333 ---tgtttaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696192 10 + 195804263 ---tgtttaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733598 10 + 4876863 ---tgtttaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617957 9 + 115148730 ---tgtttttaa- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187850210 10 + 189454096 ---tttttaaaaa i macFas5.chr5 I 2 I 2 s chlSab2.chr7 134222942 10 + 135778131 ---catttaaaaa i chlSab2.chr7 C 0 I 61 s otoGar3.GL873580 11163444 9 - 11315646 ---tattcagtg- i otoGar3.GL873580 I 9 C 0 s dasNov3.JH570353 1348657 10 - 2520184 CGATGGGCAA--- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e canFam3.chr16 16859961 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e rheMac8.chr5 188902778 61 + 190429646 I a score=8361.000000 s hg38.chr4_KI270789v1_alt 19402 5 + 205944 TGCTT s panTro5.chr4 192811699 5 + 194502333 tgctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696202 5 + 195804263 tgctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733608 5 + 4876863 tgctt i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187850222 5 + 189454096 tgttt i macFas5.chr5 I 2 I 42 s otoGar3.GL873580 11163453 5 - 11315646 tactt i otoGar3.GL873580 C 0 I 1 s dasNov3.JH570353 1348667 5 - 2520184 TGCTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e canFam3.chr16 16859961 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e rheMac8.chr5 188902778 61 + 190429646 I e nomLeu3.chr7b 112617966 0 + 115148730 C a score=1911.000000 s hg38.chr4_KI270789v1_alt 19407 1 + 205944 A s panTro5.chr4 192811704 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696207 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733613 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617966 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11163459 1 - 11315646 a i otoGar3.GL873580 I 1 C 0 s dasNov3.JH570353 1348672 1 - 2520184 A i dasNov3.JH570353 C 0 I 2543 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e canFam3.chr16 16859961 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I a score=-2263.000000 s hg38.chr4_KI270789v1_alt 19408 8 + 205944 A--------------Ctttttt s panTro5.chr4 192811705 22 + 194502333 aatttttttttttttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696208 8 + 195804263 a--------------atttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733614 6 + 4876863 a----------------ttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112617967 8 + 115148730 a--------------cgttttt i nomLeu3.chr7b C 0 I 36 s otoGar3.GL873580 11163460 7 - 11315646 a--------------ctttac- i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859961 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I a score=4972.000000 s hg38.chr4_KI270789v1_alt 19416 6 + 205944 tttttt s panTro5.chr4 192811727 6 + 194502333 tttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696216 6 + 195804263 tttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733620 6 + 4876863 tttttt i gorGor5.CYUI01015356v1 C 0 C 0 s otoGar3.GL873580 11163467 6 - 11315646 tttctt i otoGar3.GL873580 C 0 I 818 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859961 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I e nomLeu3.chr7b 112617975 36 + 115148730 I a score=17303.000000 s hg38.chr4_KI270789v1_alt 19422 36 + 205944 ttttttttttttgagacggagactcgctgtgttgcc s panTro5.chr4 192811733 36 + 194502333 ttttttttttttgagacggagactcactgtgttgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696222 34 + 195804263 tttttttttgt--agacggagactcactgtgttgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733626 36 + 4876863 ttttttttttttgagacggagactcgctgtgtcgcc i gorGor5.CYUI01015356v1 C 0 C 0 s canFam3.chr16 16859961 15 - 59632846 ---------------------actagctttgttacc i canFam3.chr16 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I e nomLeu3.chr7b 112617975 36 + 115148730 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=63214.000000 s hg38.chr4_KI270789v1_alt 19458 125 + 205944 cagcctggagtgcagtggcgcaatctgggctcactgcaagctccgcctcccgggttcccgccattctcctgcctcagcctcccgagcagctgggactacaggtgcccgccaccacacccggctaa s panTro5.chr4 192811769 125 + 194502333 cagcctggagtgcagtggtgcaatctcggctcactgcaagctctgcctccctggttcacgccattctcctgcctcagcctcccaagcagctgggactacaggcacccgccaccacacccagcaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696256 125 + 195804263 cagcctggagtgcagtggtgcaatcttggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagcagctgggactacaggcacccgccaccacacccagcaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733662 125 + 4876863 caggctggagtgcaggggcgtgatctcggctcactgcaagctccgccgcccgggttcccgccattctcctgcctcagcctcccaagcagctgggcctacaggcgcccgccaccacacccggctaa i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I e nomLeu3.chr7b 112617975 36 + 115148730 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=1820.000000 s hg38.chr4_KI270789v1_alt 19583 2 + 205944 tA s panTro5.chr4 192811894 2 + 194502333 tA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696381 2 + 195804263 tA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733787 2 + 4876863 tA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618011 2 + 115148730 ta i nomLeu3.chr7b I 36 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e manLeu1.NW_012102221v1 2653507 61 - 2847728 I e chlSab2.chr7 134222952 61 + 135778131 I e cerAty1.NW_012001672v1 3265765 51 + 4669795 I e macNem1.NW_012013133v1 24231657 61 - 25927173 I e macFas5.chr5 187850227 42 + 189454096 I e rheMac8.chr5 188902778 61 + 190429646 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=116207.000000 s hg38.chr4_KI270789v1_alt 19585 26 + 205944 AAAATGTTTTTAAAAACAA-AAGTGAA s panTro5.chr4 192811896 26 + 194502333 AAAATGTTTTTAAAAACAA-AAGTGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696383 26 + 195804263 AAAATGTTTTTAAAAACAA-AAGTGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733789 26 + 4876863 AAAACGTTTTTAAAAACAA-AAGTGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618013 27 + 115148730 aaaatgtttttaaaaACAATGAGTGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902839 27 + 190429646 aaaatgtttttaaaaaCAAAAAGTGAA i rheMac8.chr5 I 61 C 0 s macFas5.chr5 187850269 27 + 189454096 aaaatgtttttaaaaaCAAAAAGTGAA i macFas5.chr5 I 42 C 0 s macNem1.NW_012013133v1 24231718 27 - 25927173 aaaatgtttTTAAAAACAAAAAGTGAA i macNem1.NW_012013133v1 I 61 C 0 s cerAty1.NW_012001672v1 3265816 27 + 4669795 aaaatgtttttaaaaACAAAAAGTGAA i cerAty1.NW_012001672v1 I 51 C 0 s chlSab2.chr7 134223013 27 + 135778131 aaaatgtttttaaaaACAAAAAGTGAA i chlSab2.chr7 I 61 C 0 s manLeu1.NW_012102221v1 2653568 27 - 2847728 aaaatggttttaaaaaCAAAAAGTGAA i manLeu1.NW_012102221v1 I 61 C 0 e calJac3.chr3 1305205 11 + 190850796 I e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e saiBol1.JH378165 1220896 10 + 14256875 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=12709.000000 s hg38.chr4_KI270789v1_alt 19611 2 + 205944 CC s panTro5.chr4 192811922 2 + 194502333 CC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696409 2 + 195804263 CC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733815 2 + 4876863 CC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618040 2 + 115148730 CC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902866 2 + 190429646 CC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850296 2 + 189454096 CC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231745 2 - 25927173 CC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265843 2 + 4669795 CC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223040 2 + 135778131 CC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653595 2 - 2847728 CC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305216 2 + 190850796 ct i calJac3.chr3 I 11 C 0 s saiBol1.JH378165 1220906 2 + 14256875 ct i saiBol1.JH378165 I 10 C 0 e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e aotNan1.NW_018492112v1 1711709 43 + 5030052 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=82601.000000 s hg38.chr4_KI270789v1_alt 19613 16 + 205944 ACCTTTGTTCACTCAT s panTro5.chr4 192811924 16 + 194502333 ACCTTTGTTCACTCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696411 16 + 195804263 ACCTTTGTTCACTCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733817 16 + 4876863 ACCTTTGTTCACTCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618042 16 + 115148730 ACCTTTGTTCACTCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902868 15 + 190429646 ACCTTTGTTCAC-CAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850298 15 + 189454096 ACCTTTGTTCAC-CAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231747 15 - 25927173 ACCTTTGTTCAC-CAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265845 15 + 4669795 ACCTTTGTTCAC-CAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223042 15 + 135778131 ACCTTTGTTCAC-CAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653597 15 - 2847728 ACCTTTGTTCAC-CAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305218 16 + 190850796 accttggttaactcaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220908 16 + 14256875 acctcggttaactgag i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1711752 16 + 5030052 ACCTTCGTTAACTCAA i aotNan1.NW_018492112v1 I 43 C 0 e cebCap1.NW_016107886v1 1271591 65 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=48720.000000 s hg38.chr4_KI270789v1_alt 19629 5 + 205944 TGTTT s panTro5.chr4 192811940 5 + 194502333 TGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696427 5 + 195804263 TGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733833 5 + 4876863 TGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618058 5 + 115148730 TGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902883 5 + 190429646 TGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850313 5 + 189454096 TGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231762 5 - 25927173 TGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265860 5 + 4669795 TGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223057 5 + 135778131 TGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653612 5 - 2847728 TGTTT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305234 5 + 190850796 tgttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220924 5 + 14256875 tgttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271656 5 + 2196201 tgttt i cebCap1.NW_016107886v1 I 65 C 0 s aotNan1.NW_018492112v1 1711768 5 + 5030052 TGTTT i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e canFam3.chr16 16859976 0 - 59632846 C e mm10.chr8 86500965 546 - 129401213 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=578300.000000 s hg38.chr4_KI270789v1_alt 19634 69 + 205944 TTAAAACTTTAGGTACTATTTAGTGTTTTGGAACTTTACCTGCTTATTATCTGCAACATGAATTTAATA s panTro5.chr4 192811945 69 + 194502333 TTAAAACTTTAGGTACTATTTAGTGTTTTGGAACTTTACCTGCTTATTAACTGCAACATGAATTTAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696432 69 + 195804263 TTAAAACTTCAGTTACTATTTAGTGTTTTGGAACTTTACCTGCTTATTAACTGCAACATGAATTTAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733838 69 + 4876863 TTAAAACTTTAGGTACTATTTAGTGTTTTGGAACTTTACCTGCTTATTATCTGCAACATGAATTTAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618063 69 + 115148730 TTAAAACTTTAGGTACTTTTTAGTGTTTTGGAACTTTACCTGCTTATTATCTGCAACATGAATTTCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902888 66 + 190429646 TTAAAACTTTGGGTACGATTTAGTGTTTTGGAACTTTACCTGCTTAT---CTGCAACATGAATTTAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850318 66 + 189454096 TTAAAACTTTGGGTACGATTTAGTGTTTTGGAACTTTACCTGCTTAT---CTGCAACATGAATTTAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231767 66 - 25927173 TTAAAACTTTGGGTACGATTTAGTGTTTTGGAACTTTACCTGCTTAT---CTGCAACATGAATTTAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265865 66 + 4669795 TTAAAACTTTGGGTACGATTTAGTGTTTTGGAACTTTACCTGCTTAT---CTGCAGCATGAATTTAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223062 64 + 135778131 TTAAAAC--TGCGTACGATTTTGTGTTTTGGAACTTTACCTGCTTAT---CTGCAACATGAATTTAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653617 66 - 2847728 TTAAAACTTTGGGTACGATTTAGTGTTTTGGAACTTTATCTGCTTAT---CTGCAACATGAATTTAATA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305239 66 + 190850796 ttaaaacttcgggtactatttcctgttttggaactttacctgcttat---ctgcaacatgaatttaata i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220929 66 + 14256875 ttaaaacttcaggtactatttcacgttttggaactttacctgcttct---ctgcaacatgaatttaata i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271661 66 + 2196201 ttaaaactccgggtactatttcatgttttagaactttacctgcttat---ctgcaacatgaatttaatc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711773 66 + 5030052 TTAAAACTTCGGGTACTATTTCGTGTTTTGGAACTTTACCTGCTTAT---GTGCAACATGAATTTAATA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16859976 66 - 59632846 ttaaaaatcttgagaatatttagtgtattaaaaacttactttcctat---ctccaaaataaagataatg i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e mm10.chr8 86500965 546 - 129401213 I e colAng1.NW_012116221v1 785213 713 + 2368649 I e otoGar3.GL873580 11163473 818 - 11315646 I a score=127345.000000 s hg38.chr4_KI270789v1_alt 19703 19 + 205944 ATA-T---CATAAAAACTGCATT s panTro5.chr4 192812014 22 + 194502333 ATA-TTATCATAAAAACTGCATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696501 22 + 195804263 ATA-TTATCATAAAAACTGCATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733907 19 + 4876863 ATA-T---CATAAAAACTGCATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618132 19 + 115148730 ATA-T---CATAAAAACTGCATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902954 22 + 190429646 CTG-TTATCATAAAAACTGCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850384 22 + 189454096 CTG-TTATCATAAAAACTGCATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231833 22 - 25927173 CTG-TTATCATAAAAACTGCATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265931 22 + 4669795 CTG-TTATCATAAAAACTGCATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223126 22 + 135778131 ATA-TTATCATAAAAACTGCATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653683 22 - 2847728 CTG-TTATCATAAAAACTGCATC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305305 23 + 190850796 atacttatcATAAAAACTGCATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1220995 22 + 14256875 atacttatcATAAAAACTGC-TC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271727 23 + 2196201 atacttatcctAAAAACTGCATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711839 23 + 5030052 ATACTTATCCTAAAAACTGCATC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11164291 17 - 11315646 ------ATATCAAAAACTGTACC i otoGar3.GL873580 I 818 C 0 s canFam3.chr16 16860042 20 - 59632846 atacacatcctaaaag--gctt- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e dasNov3.JH570353 1348673 2543 - 2520184 I e mm10.chr8 86500965 546 - 129401213 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=329039.000000 s hg38.chr4_KI270789v1_alt 19722 38 + 205944 TAAAAAGAAGATGCACTGAGGTGATGAGTCATA-TACAA s panTro5.chr4 192812036 38 + 194502333 TAAAAAGAAGATGCACTGAGGTGATGAGTCACA-TACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696523 38 + 195804263 TAAAAAGAAGATGCACTGAGGTGATGAGTCACA-TACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733926 38 + 4876863 TAAAAAGAAGATGCACTGAGGTGATGAGTCACA-TACAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618151 35 + 115148730 TAAA---AAGATGCACGGAGGTGATGTGTCATA-TACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188902976 38 + 190429646 TAAAAAGAAGATGCACTGAGGCGATGAGTCATT-TACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850406 38 + 189454096 TAAAAAGAAGATGCACTGAGGCGATGAGTCATT-TACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231855 38 - 25927173 TAAAAAGAAGATGCACTGAGGCGATGAGTCATT-TACAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265953 38 + 4669795 TAAAAAGAAGATGCACTGAGGCGATGAGTCATT-TACAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223148 38 + 135778131 TAAAAAGAAGATGCACTGAGGCAATGAGTCATA-TACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653705 38 - 2847728 TAAAAAGAAGATGCATTGAGGCGATGAGTCATT-TACAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 1305328 37 + 190850796 TAAAAGGAGGATGCACTGAGG-CTTGAGTCATG-TACAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1221017 37 + 14256875 TAAAAGGAAGAGGCACTGAGG-GGTGAGCCATA-TACAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271750 37 + 2196201 TAAAAGGAAGATGCACTGAGA-GGTGAGTCATA-TACAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711862 37 + 5030052 TAAAAGGAAGATGCACTGAGG-GGTGAGTCATA-TACAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11164308 38 - 11315646 CAAAGAGAACATGTGCGGAGATGGTGGGTTTTA-TAGAT i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16860062 34 - 59632846 ---aatgagaatgcattgagc-tacgtgtaaTA-TACAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351216 39 - 2520184 tacaGTGGGAATGAGCAGAGATGATGTATAATATTGCAA i dasNov3.JH570353 I 2543 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e mm10.chr8 86500965 546 - 129401213 I e colAng1.NW_012116221v1 785213 713 + 2368649 I a score=544776.000000 s hg38.chr4_KI270789v1_alt 19760 53 + 205944 CTGT-GGGCAGGCAAGATTTTCTTGTTCCCTGTACCTCGTT---------------AACTC--ATTAGTGC s panTro5.chr4 192812074 53 + 194502333 CTGT-GGGCAGGCAAGATTTTCTTGTTCCCTGTACCTCGTT---------------AACTC--ATTAGTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696561 53 + 195804263 CTGT-GGGCAGGCAAGATTTTCTTGTTCCCTGTACCTCGTT---------------AACTC--ATTAGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3733964 53 + 4876863 CTGT-GGGCAGGCAAGATTTTCTTGTTCCCTGTACCTCGTT---------------AACTC--ATTAGCGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618186 53 + 115148730 CTGT-GGGCAGGCAAGATTTTCTTGTTCCCTGTAACTCATT---------------AACTC--ATTAGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903014 53 + 190429646 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCCGTACCTCATT---------------AACTC--ATTAGTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850444 53 + 189454096 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCCGTACCTCATT---------------AACTC--ATTAGTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231893 53 - 25927173 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCCGTACCTCATT---------------AACTC--ATTAGTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3265991 53 + 4669795 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCCGTACCTCATT---------------AACTC--ATTAGTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223186 53 + 135778131 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCTGTACCTCATT---------------AACTC--ATTAGTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653743 53 - 2847728 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCCGTACCTCATT---------------AACTC--ATTAGTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 785926 53 + 2368649 CTGT-GGGTAGGCAAGATTTTCTTGTTCCCTGCACCTCATT---------------AACTC--ATTAGTGC i colAng1.NW_012116221v1 I 713 C 0 s calJac3.chr3 1305365 54 + 190850796 CTGTGGGGTACGCATGGGTTTCTTCTTCCCTGCACCTCACT---------------AACTC--ATTAGTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1221054 54 + 14256875 CTGTGGGGTATGCAAGATTTTCTTCTTCCCTGCGCCTCACT---------------AACTC--ATGAGTAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271787 54 + 2196201 CTGTGGGGTACGCAAGATTTTCTTCTTCCGTGCACCTCACT---------------AACTC--ATTGGTAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711899 54 + 5030052 CTGTGGGGTACGCAAGATTTTCTTCTTCCCTGCACCTCACT---------------AACTC--ATTAGTAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11164349 53 - 11315646 TCGA-CAGTGGGCAAGATACTCCTCTTCCCATT--CTCATC---------------AGCTTTGATCAGGTT i otoGar3.GL873580 I 3 I 1 s canFam3.chr16 16860096 67 - 59632846 CTGTAGGGTAGGCAAGGCTTCCGTCTCCCCCTTGCTTCCTCC--AGAGAAGAGAAGCACTC--ATTAGCAT i canFam3.chr16 C 0 I 11 s dasNov3.JH570353 1351255 69 - 2520184 CTGCAGGGAAGGTAAGCCTTCCTTCTCCTCTTTACCTCACTCCTAGAGAAGAGACACATTT--ACCAGTGC i dasNov3.JH570353 C 0 I 11 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17458685 342 - 93316391 I e mm10.chr8 86500965 546 - 129401213 I a score=1317061.000000 s hg38.chr4_KI270789v1_alt 19813 112 + 205944 AGGATACAGATTGGATAACGTCTGCTAGTGAGGAAC-TCTGTGTTAAAATGCC--TTTCCATAGGTGTCACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGCCAGCTG s panTro5.chr4 192812127 112 + 194502333 AGGATACAGATTGGATAACATCTGCTAGTGAGGAAC-TCTGCATTAAAATGCC--TTTCCATAGGTGTCACTTTCTCCTGTCCCTGCAGTGCCACCACAGAAGCCCAGCCAGCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696614 112 + 195804263 AGGATACAGATTGGATAACATCTGCTAGTGAGGAAC-TCTGCATTAAAATGCC--TTTCCATAGGTGTCACTTTCTCCTGTCCCTGCAGTGCCACCACAGAAGCCCAGCCAGCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734017 112 + 4876863 AGGATACAGATTGGATAACGTCTGCTAGTGAGGAAC-TCTGCGTTAAAATGCC--TTTCCATAGGTGTCACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGCCAGCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618239 112 + 115148730 AGGATACAGATTGGATTACATCTGCTAGTGAGGAAC-TCTCTGTTAAAATGCC--TTTCCATAGGTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACGAAAGCCCAGCCAGCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903067 114 + 190429646 TGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGTCAGTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850497 114 + 189454096 AGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGTCAGTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24231946 114 - 25927173 AGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGTCAGTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266044 114 + 4669795 AGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGTCAGTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223239 106 + 135778131 AGGATGTAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATGGCTGTGACTTTCTCCTGTCCCTGCATGGCCACCACAAAAGCCCA-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653796 114 - 2847728 AGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGCCAGTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 785979 114 + 2368649 AGGATATAGATTGGATTACATTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCCTTTTTCCATAGCTGTGACTTTCTCCTGTCCCTGCAGTGCCACCACAAAAGCCCAGTCAGCTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1305419 112 + 190850796 AGGATACACATTGGATTTCACTTGCTAGTGAGTAAC-TCTGTGTTAAAATGCG--TTTTCATGGATGTGACTTCCTCCTATCCCGGCAGTGCCACCACAAGAGCCCACCCAGCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1221108 110 + 14256875 AGGATGCAGACTGCATTTCACTTGCTGGTGAGTAA---CTGTGGTAAAATGCG--TTTTCATAGATGTGACTTCCTCCTACCCCTGCAGTGCCACCACAAAAGCCCACCCAGCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271841 109 + 2196201 AGGATGCAGATTGGATTTCACTTGCTAGTGAGGAA----CATGTCAAAATGCG--TTTTCATAGATGTGACTTCCTCCTATCCCTGCAGTGCCTCCACAAAAGCCCACGCAGCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1711953 112 + 5030052 AGGATGCAGATTGGATTTCACTTGTTAGTGAGTAAC-TCTGTGTTAAAATGCA--TTTTCATAGATGTGACTTCCTCCTATCCCTGCAGTGCCACCACAGAAGCCCACCCAGCTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459027 112 - 93316391 AGGACACAGATTGGATTACATTTGCTAGTGAGTAACTTTTGTGTTAAAATGCC--TTTACATAGCTGAAACTTTCTCCTATCCCCACAGTGCCA-GGACAAAGCCCAGCCATCTG i micMur3.chr14 I 342 C 0 s otoGar3.GL873580 11164403 111 - 11315646 AGGACATAGATCGGATTACACTTGCTAATGAGTAAC-TTTGTGCTAAAAGGTC--TTTACATAGGTGTGACCTTCTCCTATCCCCACAGTGCAG-GACAAAAGCCAGGCCATCTG i otoGar3.GL873580 I 1 I 295 s canFam3.chr16 16860174 112 - 59632846 AGGACACAGTTTGGATCACCTTTGCTAGTGAGAAAC-GCTGTGCTAAAATGCT--TCTAGATGGGTACGACTTCCTCTAGTCTCTGCAATGCAATGACAAAAGCCCAGTCATCTG i canFam3.chr16 I 11 C 0 s dasNov3.JH570353 1351335 91 - 2520184 AGGACACAGATTGCATCGCCTTTGTGAGTGAGTCAT-AGTGTGTTAAAATACC--TGTCCAGAGGTGTGGCACTCCTC-----------------CACCGTGGCCCATCTG---- i dasNov3.JH570353 I 11 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e mm10.chr8 86500965 546 - 129401213 I a score=44165.000000 s hg38.chr4_KI270789v1_alt 19925 5 + 205944 ATGGC s panTro5.chr4 192812239 5 + 194502333 ATGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696726 5 + 195804263 ATGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734129 5 + 4876863 ATGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618351 5 + 115148730 ATGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903181 5 + 190429646 ATGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850611 5 + 189454096 ATGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232060 5 - 25927173 ATGGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266158 5 + 4669795 ATGGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223345 2 + 135778131 ---GC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653910 5 - 2847728 ATGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786093 5 + 2368649 ATGGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1305531 5 + 190850796 ATGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1221218 5 + 14256875 ATGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271950 5 + 2196201 ACGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1712065 5 + 5030052 ATGGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459139 5 - 93316391 ATGAT i micMur3.chr14 C 0 C 0 s canFam3.chr16 16860286 5 - 59632846 CTGTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351426 4 - 2520184 GTAA- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e mm10.chr8 86500965 546 - 129401213 I e otoGar3.GL873580 11164514 295 - 11315646 I a score=473827.000000 s hg38.chr4_KI270789v1_alt 19930 44 + 205944 TTTAGCCA----ATGTGGCAGCAGGGAGTGTGAGGCTTCTGGCTTTGC s panTro5.chr4 192812244 44 + 194502333 TTTAGCCA----ATGTGGCAGCAGGGAGTGTGAGGCTTCTGGCTTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696731 44 + 195804263 TTTAGCCA----ATGTGGCAGCAGGGAGTGTGAGGCTTCTGGCTTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734134 44 + 4876863 TTTCGCCA----ATGTGGCAGCAGGAAGTGTGAGGTTTCTGGCTTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618356 42 + 115148730 TTTAGCCA----TTGTGGCAGCAGGGAGTGT--GGCTTCTGGCTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903186 44 + 190429646 TTTAGCCA----GTGTGGCAGCCGGGAGCGTGAAGCTTCTGATTTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850616 44 + 189454096 TTTAGCCA----GTGTGGCAGCCGGGAGCGTGAAGCTTCTGATTTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232065 44 - 25927173 TTTAGCCA----GTGTGGCAGCCGGGATCGTGAAGCTTCTGATTTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266163 44 + 4669795 TTTAGCCA----GTGTGGCAGCCGGGAGTGTGAATCTTGTGACTTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223347 44 + 135778131 TTTAGCCA----GTGTGGCAGCCGGGAGTGTGAGGCTTCTGACTCCGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653915 44 - 2847728 TTTAGCCA----GTGTGGCAGCCGGGAGTGTGAATCTTCTGACTTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786098 44 + 2368649 TTTAGCCA----GTGCGGCAGCAGGGAGTGTGAGGCTTCTGACTTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1305536 44 + 190850796 TTTATGCA----ATGCGGCAGCAGGGAGTGTGAGAATTCCGGCTTTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 1221223 44 + 14256875 TTTATCCA----GTGCGGAAGCAGGGAGTGTGAGACTTGCGGCTTTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271955 44 + 2196201 TTCATCCA----GTGTGGCAGCAGGGAGTGTGAGGCTTGCAGCTTTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1712070 44 + 5030052 TTTATCCA----ATGCAGCAGCAGGGAGTGTGAGACTTCCAGCTTTGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459144 48 - 93316391 TTTATCCAGTGTGTGTGGCAGCAGGGTGTGTAGGGCTTCTGGTTTTGT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164809 25 - 11315646 TTTGT----------------CAGGGT------GGCTT-TGGCTTTGC i otoGar3.GL873580 I 295 C 0 s canFam3.chr16 16860291 44 - 59632846 TTGTTCCA----GTGTGGCAGAAGGGATTATAGGGCTTTTGGGTTTGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351430 43 - 2520184 -TCATCTA----ATGCGGCAGCAGGAGGCCCAGGGCTTCTGGCTTTGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e mm10.chr8 86500965 546 - 129401213 I a score=655299.000000 s hg38.chr4_KI270789v1_alt 19974 55 + 205944 TAGGACT------CAGGCCAGCTGTCTCC------GTCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC s panTro5.chr4 192812288 55 + 194502333 TAGGACT------CAGGCCAGCTGTCTCC------GTCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696775 55 + 195804263 TAGGACT------CAGGCCAGCTGTCTCC------GTCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734178 55 + 4876863 TAGGACT------CAGGCCAGCTGTCTCC------GTCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618398 55 + 115148730 TAGGACT------CAGGCCAGTTGTCTCC------GTCACTAGGTTCAGG-GTGCTCCCT-TTAGTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903230 55 + 190429646 CAGGACT------CAGGCCCGCTGTCTCT------GCCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850660 55 + 189454096 CAGGACT------CAGGCCCGCTGTCTCC------GCCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232109 55 - 25927173 CAGGACT------CAGGCCCGCTGTCTCC------GCCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266207 55 + 4669795 CAGGACT------CAGGCCCGCTGTCTCC------GCCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223391 55 + 135778131 CAGGACT------CAGGCCCGCTGTGTCC------GCCACTGGGCTTGGG-GTGCTCCCT-TTAGTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2653959 55 - 2847728 CAGGACT------CAGGCCCGCTGTCTCC------GCCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786142 55 + 2368649 CAGGACT------CAGGCCAGCTATCTCC------GTCACTGGGCTCAGG-GTGCTCCCT-TTAGTTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 1305580 55 + 190850796 AAGGATG------CAGGCCAGTTGTCTCT------ATCTCCGGGCTCAAT-GTGCTCCCT-TTAGTTAG i calJac3.chr3 C 0 n 0 s saiBol1.JH378165 1221267 55 + 14256875 GAGGATG------CAGGCCAGTTGTCTCT------CTCTCTGGGCTCAGT-GGGCTCCCT-TTCGTTAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1271999 55 + 2196201 CAGGGCG------CAGGCCAGTTGTCTCT------GTCTCTGGGCTCAGT-GTGCTCCCT-TTAGTTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1712114 55 + 5030052 AAGGACG------CAGGCCAGTTGTCTCC------ATCACTGGGCTCAAT-GTGCTCCCT-TTAGTTAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459192 60 - 93316391 CGCGACT------CGGGCCAGATGGTGCT--TACCATCATTGGGCTCAAATGTGCTCCTT-TTAGTTAG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164834 62 - 11315646 CATGACT------CAGCCCAGATGTTACTGGGGGCATCATGAGGCTCAAATGTGCTCCCT-TTAATTAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501511 56 - 129401213 TAAGACT------CAAGCTAGATGCTACT------GTTTTTGAGCTCAAATGTGCTTCCT-TCAATTAG i mm10.chr8 I 546 C 0 s canFam3.chr16 16860335 62 - 59632846 TAGCACCCCAAAACAGGCCAGTTTTTACT------ACCA-GGGGCTCAAATGTACCCCCTGGTAGTTAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351473 57 - 2520184 CGGGACC------CTGGCTAATTGTCCCC-----TGCCATTGGGTTCAAATATACTTCCT-TTAGTTAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=19110.000000 s hg38.chr4_KI270789v1_alt 20029 1 + 205944 A s panTro5.chr4 192812343 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696830 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734233 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618453 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903285 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850715 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232164 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266262 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223446 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654014 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786197 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547037 1 - 190850796 a i calJac3.chr3 I 2035 C 0 s saiBol1.JH378165 1221322 1 + 14256875 A i saiBol1.JH378165 C 0 T 15638 s cebCap1.NW_016107886v1 1272054 1 + 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 1712169 1 + 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459252 1 - 93316391 A i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164896 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501567 1 - 129401213 A i mm10.chr8 C 0 I 1 s canFam3.chr16 16860397 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351530 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=63676.000000 s hg38.chr4_KI270789v1_alt 20030 10 + 205944 AAATCAGAC--C s panTro5.chr4 192812344 10 + 194502333 AAATCAGAC--C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696831 10 + 195804263 AAATCAGAC--C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734234 10 + 4876863 AAATCAGAC--C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618454 10 + 115148730 AAATCAGAC--C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903286 10 + 190429646 AAATGACAC--C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850716 10 + 189454096 AAATGACAC--C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232165 10 - 25927173 AAATGACAC--C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266263 10 + 4669795 AAATGACAC--C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223447 10 + 135778131 AAATGACAC--C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654015 10 - 2847728 AAATGACAC--C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786198 10 + 2368649 AAATGAGAC--T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547038 9 - 190850796 aaaTCAGAC--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037426 9 - 14256875 aaaTCAGAC--- i saiBol1.JH378165 I 2038 C 0 s cebCap1.NW_016107886v1 1272055 10 + 2196201 AAGTCAGACC-- i cebCap1.NW_016107886v1 C 0 n 0 s aotNan1.NW_018492112v1 1712170 10 + 5030052 AAATCAGAC-C- i aotNan1.NW_018492112v1 C 0 n 0 s micMur3.chr14 17459253 10 - 93316391 ATATCAGAC--T i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164897 10 - 11315646 AGATCAGCA--T i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501569 10 - 129401213 AAACTAAAT--C i mm10.chr8 I 1 C 0 s canFam3.chr16 16860398 10 - 59632846 AAATCAGAG--T i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1351531 10 - 2520184 AAACCAGAC--C i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=60231.000000 s hg38.chr4_KI270789v1_alt 20040 10 + 205944 CCGTGTTGTG s panTro5.chr4 192812354 10 + 194502333 TCGTGTTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696841 10 + 195804263 TCGTGTTGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734244 10 + 4876863 CTGTGTTGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618464 10 + 115148730 CCGTGGTATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903296 10 + 190429646 TTGTGGTGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850726 10 + 189454096 TTGTGGTGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232175 10 - 25927173 TTGTGGTGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266273 10 + 4669795 TTGTGATGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223457 10 + 135778131 TTGTGGTGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654025 10 - 2847728 TTGTGGTGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786208 10 + 2368649 CTGTGGTGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547047 10 - 190850796 TTGTGGCCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037435 10 - 14256875 CCGTGGCAGA i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17459263 10 - 93316391 TCTTGGTGTG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164907 10 - 11315646 TCTTGATGTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501579 8 - 129401213 TCTTGGTG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16860411 10 - 59632846 TCTCAGTGTG i canFam3.chr16 I 3 I 1 s dasNov3.JH570353 1351541 5 - 2520184 TTCTG----- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1272065 0 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e aotNan1.NW_018492112v1 1712180 0 + 5030052 I a score=10785.000000 s hg38.chr4_KI270789v1_alt 20050 1 + 205944 G s panTro5.chr4 192812364 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696851 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734254 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618474 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903306 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850736 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232185 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266283 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223467 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654035 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786218 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547057 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037445 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3319785 1 - 5030052 G i aotNan1.NW_018492112v1 I 2074 C 0 s micMur3.chr14 17459273 1 - 93316391 A i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11164917 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501587 1 - 129401213 A i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1351546 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1272065 0 + 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e canFam3.chr16 16860421 1 - 59632846 I a score=1014710.000000 s hg38.chr4_KI270789v1_alt 20051 82 + 205944 AGCCTGTGCATGTTTGCATTGCTC--TTTTG-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAACAGCC s panTro5.chr4 192812365 82 + 194502333 AGCCTGTGCATGTTTGCATTGCTC--TTTTG-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAACAGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696852 82 + 195804263 AGCCTGTGCATGTTTGCATTGCTC--TTTTG-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAACAGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734255 82 + 4876863 AGCCTGCGCATGTTTGCACTGCTC--TTTTG-AGTTAAAAATCATTGAGA-CCTAATGAGTTTAGGATAAAGGACTATAGACAGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618475 82 + 115148730 AACTGGTGCATGTTTGCATTGCTC--TTTTG-ATTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAACAGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903307 82 + 190429646 AGCCTGTGCATATTTTGATTGCTG--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAATAGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850737 82 + 189454096 AGCCTGTGCATATTTTGATTGCTG--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAATAGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232186 82 - 25927173 AGCCTGTGCATATTTTGATTGCTG--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAATAGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266284 82 + 4669795 AGCCTGTGCATATTTTGATTGCTG--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAATAGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223468 82 + 135778131 AGCCTGTGCATGTTTCGATTGCTC--TTTTT-AGTAAAAAATCATTTAGA-CCTAATGAGTTGAGGATAAAGGACTATAAACAGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654036 82 - 2847728 AGCCTGTGCATATTTTGATTGCTG--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGGACTATAAATAGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786219 82 + 2368649 AGCCTGTGCATGTTTCGATTGCTC--TTTTT-AGTTAAAAATCATTTAGA-CCTAATGAGTTTAGGATAAAGAATTATAAACAGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547058 83 - 190850796 AGCCTGTGCACATTTGGATCGCTC--TTTTTGAGTTAAAAATCATTTAGA-ACTAGTGAGTTTAGGATGAAGGACTATAAACAGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037446 83 - 14256875 AGCCTGTGCACATTTGGATTGCTC--TTTTTTAGTTAAAAATCATTTAGA-CCTAATGAGCTTAGGCTGAAGGACTATAAACAGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 926034 73 - 2196201 AGCCTGTGCACATTTGGATTGCTC--TTTTTTGGTTAAAAATCATTTAGG-TCTAATGAGTTTAGGATGAAG----------AGCC i cebCap1.NW_016107886v1 I 2059 C 0 s aotNan1.NW_018492112v1 3319786 83 - 5030052 AGCCTGTGCACATTTGGATTGCTC--TTTTTTAGTTAAAAATCATTTAGA-CCTAATGAGTTTGGGATGAAGGACTATAAACATCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459274 83 - 93316391 AGCCTGTGCATGCTTGAATTGCTC--TTTTTCAGTTAAAAATAATTTAGA-CCTAAAGAATTTAGGATAAAAGCCTATGGCCAGCC i micMur3.chr14 C 0 I 66 s otoGar3.GL873580 11164918 79 - 11315646 AGCCTGTGTATGCTTGAATCACTCTTTTTTTTATTTGAAAATAATTTAGA-CTTAAGGAATTTAGAGTAAAA------GACCAGCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86501588 83 - 129401213 AAGATGTGTATAGTTGAATTGTTT--GTTTTTAGTTAAAAGTAATCTAGA-ACTAGGAAGTTTACGATTAAAAACTTTAGCAAGAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16860422 84 - 59632846 AGACTGTGCATATTTGGATTGCTC--TGTTTTAATTTAACATAATTTAGGTCCTAAAGAGTTTAGGATAAACAACTGTGACCCTCC i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1351547 73 - 2520184 ATCCTGCATTTGCTTGTATTGCTC--TGTT--AGTT-AAAATCATTTAGA--TGAAAGAGGGGAGCACAAGGGGCTATGG------ i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=659287.000000 s hg38.chr4_KI270789v1_alt 20133 54 + 205944 TGTCTTATCCAAGTTTTCTGCAATGGAGTCTGCCAGCTCATGCCCAGCTAACGA s panTro5.chr4 192812447 54 + 194502333 TGTCTTATCCAAGTTTTCTGCAATGGAGTCTGCCAGCTCATGCCCAGTTAACGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696934 54 + 195804263 TGTCTTATCCAAGTTTTCTGCAATGGAGTCTGCCAGCTCATGCCCAGTTAACGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734337 54 + 4876863 TGTCTTATCCAAGTTTTCTGCAATGGAGTCTGCCAGCTCATGCCCAGCTAACGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618557 54 + 115148730 TGTCTTATCCAAGTTTTCTGCAATGGAGTCTGCCAGCTCATGCCCAGCTAACGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903389 54 + 190429646 CATCTTATCTAAGTTTTCTGCAATGGAATCTGCCAGCTCATACCCAGCTAACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850819 54 + 189454096 CATCTTATCTAAGTTTTCTGCAATGGAATCTGCCAGCTCATACCCAGCTAACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232268 54 - 25927173 CATCTTATCTAAGTTTTCTGCAATGGAATCTGCCAGCTCATACCCAGCTAACAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266366 54 + 4669795 CATCTTATCTAAGTTTTCTGCAGTGGAATCTGCCAGCTCATACCCAGCTAACGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223550 54 + 135778131 CATCTTATCTAAGTTTTCTGCAGTGGAATCTCCCAGCTCACACCCAGCTAACGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654118 54 - 2847728 CATCTTATCTAAGTTGTCTGCAATGGAATCTGCCAGCTCATACCCAGCTAACGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786301 54 + 2368649 CATCTTATCTAAGTTTTCTGCAATGGAATCTGCCAGCTCATACCCAGCTAACGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547141 54 - 190850796 CATCTTATCTAAGTTTTCTGCAGTGGAATCTGCCAGTTCATGCCCAGCTAACAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037529 54 - 14256875 CATCTTATCTACATTTTCTGCAATGGAATCTGCCAGTTTATGCCCAGCTAACAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 926107 54 - 2196201 CATCTTATCTAAGTTTTCTGCAATTGAATCTGCCGGTTCGTGCCCAGCTAACAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3319869 54 - 5030052 CATCTTATCTCAGTTTTCTGCAATGGAATCTGCCAGTTCATGCCCAGCTGACAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11164997 54 - 11315646 CATTTTATTCAAGTATTTTTTCGTGGCAGCTGACTGCCCAAGTTCAGCTAACAA i otoGar3.GL873580 C 0 I 5 s mm10.chr8 86501671 53 - 129401213 CACCTTA-CCACGTTTTCTGCAATGGCATTTGCCAGTCCAAATCCAACTGATAA i mm10.chr8 C 0 I 5 s canFam3.chr16 16860506 54 - 59632846 CAGTTTATTGAAGTTCTCTGCAGTGGAGGCTGCCAGTCCAAGCCCAATTAAATA i canFam3.chr16 C 0 I 6 s dasNov3.JH570353 1351620 37 - 2520184 -----------------CGGCAGCGAGGTCCATCAACCCCCGCCCAGTTGAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459357 66 - 93316391 I a score=76062.000000 s hg38.chr4_KI270789v1_alt 20187 11 + 205944 -----TGTGTCTTTGA s panTro5.chr4 192812501 11 + 194502333 -----TGTGTCTTTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696988 11 + 195804263 -----TGTGTCTTTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734391 11 + 4876863 -----CGTGTCTTTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618611 11 + 115148730 -----TGTGTCTTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903443 6 + 190429646 -----TGTGTC----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850873 6 + 189454096 -----TGTGTC----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232322 6 - 25927173 -----TGTGTC----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266420 6 + 4669795 -----TGTATC----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223604 6 + 135778131 -----TGTGTC----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654172 6 - 2847728 -----TGTGCC----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786355 6 + 2368649 -----CGTGTC----- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547195 11 - 190850796 -----CGTGTCTTTGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037583 11 - 14256875 -----TGTGTCTTTGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 926161 11 - 2196201 -----TGTGTCTTTGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3319923 11 - 5030052 -----TGTGTCTTTGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459423 11 - 93316391 -----TGTGTCTTTGG i micMur3.chr14 I 66 C 0 s otoGar3.GL873580 11165056 11 - 11315646 -----TGTTTCTTTGG i otoGar3.GL873580 I 5 C 0 s mm10.chr8 86501729 11 - 129401213 -----TGTGTCATTAA i mm10.chr8 I 5 I 764 s canFam3.chr16 16860566 11 - 59632846 -----TGTGTTCCTGG i canFam3.chr16 I 6 C 0 s dasNov3.JH570353 1351657 16 - 2520184 TAACCTGTGTCTCTGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=349434.000000 s hg38.chr4_KI270789v1_alt 20198 48 + 205944 AGCCATTAGG-TATTTTC-TATTA------TTTTTTTGCACATAAATATGCTTTGT s panTro5.chr4 192812512 48 + 194502333 AGCCATTAGG-TATTTTC-TATTT------TTTTTTTGCACATAAATATGCTTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192696999 49 + 195804263 AGCCATTAGG-TATTTTCATATTT------TTTTTTTGCACATAAATATGCTTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734402 48 + 4876863 AGCCATTAGG-TATTTTC-TATTA------TTTTTTTGCACATAAATATGCTTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618622 48 + 115148730 AGCCATTAGG-TGTTTTC-TATTA------TTTTTTTGCACATAAATATGCTTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903449 34 + 190429646 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGCTTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850879 34 + 189454096 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGCTTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232328 34 - 25927173 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGCTTTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266426 34 + 4669795 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGCTTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223610 34 + 135778131 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGTTTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654178 34 - 2847728 --------------TTTC-TATTA-------TTTTTTGCACATAAATAGGCTTTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786361 34 + 2368649 --------------TTTC-TGTTA-------TTTTTTGCACATAAATAGGCTTTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547206 47 - 190850796 AACCATTAGG-CACTTTC-TATTA-------TTTTTTGCATATAAATATGCTTTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037594 48 - 14256875 AACCATTAGG-CACTTTC-CCTTA------TTTTTTTGCATATAAATATGCTTTGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 926172 47 - 2196201 AAACATTAAG-CACTTTC-TATTA-------TTTTTTGCATATAAATATGCTTTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3319934 47 - 5030052 AACCATTAGGCCCCTTTC-TATTA--------CTTTTGCATATAAATATACTTTGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459434 47 - 93316391 ATCCACTAGG-TACTTTG-CATTG-------TTTTTCACACATAAATATGATTTGG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11165067 47 - 11315646 ATCCATTAAG-AACTTTC-TGCTG-------TCCTCTGCACATAAATATGGCTTGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16860577 40 - 59632846 ---------------GTC-CATTAAACACTTTTCTTTGCACATGAACACATTTTGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351673 33 - 2520184 ---------------GCC-CACGT-------GTCTTCCTGCATAAATATGTTTTGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e mm10.chr8 86501740 764 - 129401213 I a score=5052757.000000 s hg38.chr4_KI270789v1_alt 20246 398 + 205944 GGACCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACCAA-CATATGTGATGGTGGGTTGCTTTCATGTATTTCTGATAGTAATCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTGCTAAACTATAGTATATTTGGCCCTTAAAAGtcctttgcttgctccccgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgcttttatggcatta---att--atctctgcattgattacttct s panTro5.chr4 192812560 398 + 194502333 GGACCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACTAA-CATATGTGATGGTGGGTTGCTTTCATGTATTTCTGATAGTAATCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTGCTAAACTATAGTATATTTGGCCCTTAAAAGtcctttgcttgctccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgcttttatggcatta---att--atctctgcattgattacttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697048 398 + 195804263 GGACCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACTAA-CATATGTGATGGTGGGTTGCTTTCATGTATTTCCGATAGTAATCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTGCTAAACTATAGTATATTTGGCCCTTAAAAGtcctttgcttgctccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgcttttatggcatta---att--atctctgcattgattacttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734450 398 + 4876863 GGACCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACTAA-CATATGTGATGGTGGGTTGCTTTCATGTATTTCTGATAGTAAACATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTGCTAAACTATAGTATATTTGGCCCTTAAAAGtcctttgcttgctccccgaatgttgaagtttcctactgttccttccag----gtcttctcttttcac-gttccag-cataatctcatctgcttttatggcatta---att--atctctgcattgattacttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112618670 398 + 115148730 GGACCTTATAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACCAA-CATATGTGATGGTGGGTTGCTTTCATGTATTTCTGATAGTAATCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTGCTAAACTGTAGTATATTTGGCCCTTGAAAGtcctttgcttgctccccgaatgttgaagtttctcactgttccttccag----gtcttctcttttcac-ttcctgg-cataatctcatctgcttttatggcatta---att--atctctgcattgattactcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903483 382 + 190429646 GGATCTT-----------TGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATACGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATATCAA-CATATGTGAGGGTCGGTTGCCGTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGTTGAAGAAAAGTATGTTACTCAGTCAGCTTTGTG-----CTGTAGTATATTTGGTCCTTAAAAGTCCTTTAATTGCTccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatgacatta---att--atctctgcattgattacttct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187850913 393 + 189454096 GGATCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATACGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATATCAA-CATATGTGAGGGTCGGTTGCCTTCATGTATTTCTGATAGTAGTCGTTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGTTGAAGAAAAGTATGTTACTCAGTCAGCTTTGTG-----CTGTAGTATATTTGGTCCTTAAAAGTCCTTTAATTGCTccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatgacatta---att--atctctgcattgattacttct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232362 393 - 25927173 GGATCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATACAATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATATCAA-CATATGTGAGGGTCGGTTGCCTTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGTTGAAGAAAAGTATGTTACTCAGTCAGCTTTGTG-----CTGTAGTATATTTGGTCCTTAAAAGTCCTTTAATTGCTccctgaatgttgaaatttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatgacatta---att--atctctgcattgattacttct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266460 381 + 4669795 GGATCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATATCAA-CATATGTGAGGGTCGGTTGCCTTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGTTGAAGAAAAGTATGTTATTCAGTCAGCTTTGTG-----CTGTAGTATATTTGGTCCTT--AAGTCCTTTAATTGCTccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatgacatta---------------cattgattacttct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134223644 393 + 135778131 GGATCTTGTAGAAAGCGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATCACATTGGTTAAAGTCCTAATTCTTC-ATTAATACCAA-CATATCTGATAGTGGGTTGCTTTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTG-----CTGTAGTATATTTGGTTCTTAAAAGTCCTTTAATTGCTCCCTGAATGTTGAAGTTTCTTACTGTTCCTTCCAG----Gtcttctctttccac-tttccag-cataatctaatctgttcttatggcatta---att--atctctgcattgattacttct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654212 393 - 2847728 GGATCTTGTAGAAAGAGGTGACTAGAGACTGGAGCAAGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATTTCAA-CATATGTGAGGGTCGGTTGCCTTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGTTGAAGAAAAGTATGTTATTCAGTCAGCTTTGTG-----CTGTAGTATATTTGGTCCTTAAAAGTCCTTTAATTGCTccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatgacatta---att--atctctgcattgattacttct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786395 393 + 2368649 GGATCTTGTAGAAAGAGGTGACTAGAGACTGAAGCAGGATTCAGGTCTTCCTGGATGCCCT-G-CTAAATGTCATATGATTACATTGGTTAAAGTCCTAATTCTTC-ATTAATACCAA-CATATGGGATGGTGGGTTGCTTTCATGTATTTCTGATAGTAGTCATTAGTGCTGTTTATTATTAATATGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTCAATCAGCTTTGTG-----CTGTAGTATATTTGGTCCTTAAAAGTCCTTTAActgctccctgaatgttgaagtttcttactgttccttccag----gtcttctcttttcac-tttccag-cataatctcatctgtttttatggcatta---att--atctctgcattgattacttct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547253 385 - 190850796 GGACCTTGTAGAAAGGGGTGAGTAGAGGCTGGAGCAAGCTTCGGGGCTTCCT-GATGCCCT-A-CTAAATGCCACACGATGACGTTGGTTAAAGTTCTGATGCTTC-ATTCACACCAA-CATATACGACGTCAGGCTGCTTTTGTGTACTTCTGATGGTAATCATCAGTGCTGCTTATTATTAATATGGTC---ACTTTGCCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTAAATCAGCTCTGTGCTAAACTAT-GTGTATTTGGCGCTTAAAAGTCCTTTGCTCGCTCTCTGAATGTTGAAGCTTCTTACAGTTCCTTCCAG----GTC------Tctcac-tttccag-cacagtctcatctggttt-----catta---att--atctctgcattgattacttct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13037642 396 - 14256875 GGACCTTGTAGAAAGAGGTGAGTAGAGGCTGGAGCAAGACTCGGGTATTCTTGGATGCCCT-G-CTAAATGCCATGTGATTACATTGGTTAAAGTCCTAATGCTTC-ATCCATACCGA-CATAGATGCTGTCGGGTTGCTTTCATGCATTTCTGACAGTAATCATTAGTGCTGTTTATTATTAATATGATC---ATCTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTCATTAAATCAGCTTTGTGCTAAACTGT-GTGTATTT-GTGCTTAAAAGTCCTGTGcttgctctctgaatgttgaagtttcttacagttccttccag----gtcttctcttttcac-tttccag-cataatctcatctggttttatggcatta---att--atctctgcattgattacttct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 926219 397 - 2196201 GGACCTTGTAGAAATAGGTGACTAGAGGCTGGAGCAAGACTCGGGTCTTCCTGGATGCTCT-G-CTAAATGCCATGTGATTACATTGGTTAAAGTCCTAATGCTTC-ATTCATACCAA-CATATACGATGTCGGGTTGCTTTCATGTATTTCTGATAGTAATCATTAGTGCTGTTTATTATTAACATGATC---ATTTTATCCTTGATTTCCCAGTATGCTGAAGAACAGTACGTTATCAAATCAGCTTTGTGCTAAACTGT-GTGTATTTGGCGCTTAAAAGTCCTTTGCTTGCTCTCTGAATGTTGAAGTTTCTTACGGTTCCTTCCAG----GTCTTCTCTTTTCAC-CTTCCAG-CATAATCTCATCTGGTTTTATGGCATTA---ATT--ATCTCTGCATTGATTACttct i cebCap1.NW_016107886v1 C 0 I 683 s aotNan1.NW_018492112v1 3319981 397 - 5030052 GGACCTTGTACAAATAGGTGACTAGAGGCTGGAGCAAGATTCAGGTCTTCCTGGAGGCCCT-G-CTAAATGCCATATGATTACATTGTTTAAAGTCCTAATGCTTC-ATTCATACCAA-CACATACGATGTCGGGTTGCTTTCATGTATTTCTGATAGTAATCATTAGTGCTGTTTATTATTAATAGGATC---ATTTTATCCTTGATTTCCTAGTATGCTGAAGAAAAGTATGTTATTAAATCAGCTTTGTGCTAAACTAT-GTGTATTTGGCGCTTAAAAGtcctttgcttgctctctgaatgttgaagtttcttacagttccttccag----gtcttctcttttcac-ttttcac-cataatctcatctggttttacggcatta---att--acctctgcattgattacgtct i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459481 400 - 93316391 AGGCCTTACGGAAAGAGGTGACTGCAGATTGGAGCAAGATTCAGGTATTCCTGGACGCCCTGG-CTAAACGCCATATTATTACATTAATTAAAGTTCTAATTTTTC-ATTAATACCAC-CACTTGGGATGTTGGGTTGCTTTAATGTATTTCTAGTAGCAACTATTAATGTTGTTTGCTATTAATATGATCTTATTTTTGTCCTGGATATCCTGGCATGCTGAAGAAAA--ATGTTACCCAATTAACTTTGTGCTAAACTGTATTATATTTGACCCTTAAAAGTCCTTTGCCTTTTccctgagtgttgaaggtcctcgatgttcctttcag----gtcttctcttctcac-tttccag-cataatttcatctgcttttatgacatta---att--atctctacactgattacttcc i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11165114 396 - 11315646 ACTCCTTATAGAAAGAGGTGACTACAGCCTGGAgcgagagt-aggtatgcccggatgttctgg-ctaaatgccatattattacattAATTAAAGTCCTAATTCTTT-ATTAACACCAAGAACACGTGATGATGTGCTGCTCTTATGTATTTCTGGTAGTCATTATTAATGTTGTTTATTATTAATATGATC---ATCTTATTCTTAATATCCCGGTACGCTAAAGAAAA--ATATTATCCAATTAACTTACTGCTAAACCATATTAGATTCGGCTCTCAGAAGGCCTTTGCCTGCTccccgagagtcg-aggccctcagtcctccttccag----gtcttgtcttttcac-ttcccgg-cataatttcatctgcttttatgacatta---att--atctccacactgattactccc i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86502504 375 - 129401213 GAACCTTATGGAA---GGTTAGTATAAAAGAGAACAATATCCAGGTTTTGCTAGATGTTCT-GACCAAATACAATATTGT-ACATCAGTTAAATTCCCACTTTTTC-ATTCATA-CAA-TAGCTATGATGAATAGTTGCTTTTACTTATATCTGATATCACTTGTTACTTCTATATCTTATTGATATCA-----ATTTTAACATATATCTCAAGAAAATTTGAAGAGATACACATTATTGAAGGAGTTATGTGACAAATTATGTTGCATT-GGCTCTTACAAAACCTTTGCTTTCTCCCACAG------ACCTTTTGGGTGTT-------------TTTTTTTTTTTCAG-TTTCCAACCATAATGTCATCTG-TTTCATGTTG-TG---GTG--ACCCGCCCATTGGTTACTTCC i mm10.chr8 I 764 C 0 s canFam3.chr16 16860617 300 - 59632846 GGACCTCATAAAGAGAGATGA------------------TTTGGTTATTCCTGGGT-TCTG-G-CTAAATAAAATACCATTATTTTGAATAAAGTTTCAATTCCTCTCTTGATACCAA-CATATCTTATGGTGGTTTGCTTT-ATGTATTCTTGG--------------ACTGTTTGTTGTTTAGTTAATT---A-------------------------------------------------------------AACTATAGGACATTTGGCTCTTATAAACACTTT----GCTccttaaatgttaaagttcctta---ttccctctag----gtcttctcttttcac-ttttgag-aatatcctcattcacactgataacattaattatt--atttcttcactgattacttcc i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1351706 382 - 2520184 GGACCTCAT-----GAGGTG--------CAGGGACCACAATCTGGGTTTCTTGAATTCGTT-G-GCTAAGTCCACATCAGTACATTGAATAAAGTCCTAAC-CCCC-ATTAATACCAA-CATAAGTGACGACACATTGCTTT-ATTTACCTGTGGTA----TTGTTACTGCTGT-TAGCGTTAGTAGGATC---ATTTTATCTTTGGCTTCCTAGTATGTTGGAGGAAAGTATGTTATTCAGTTAACTTTGTGTTAAAGT---GTGTATTTAACTTTTAAAAGTCCTTTGACTCCTTCTTAAATGTTGGCACTCTTTGGGGAGCTTTTCAGTATTTTCTTCTCATCTCACATTTCCAG-CCTAATCTTGACCACTTTAATGACGTTA---GTTTCATTTCTCCACTGTTTACTTCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=990100.000000 s hg38.chr4_KI270789v1_alt 20644 84 + 205944 aaattcatatctccatgcttaatattttatttgagattcagttccatat--------------taatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA s panTro5.chr4 192812958 84 + 194502333 aaattcatatctccatgcttaatattttatttgagattcagttccatat--------------taatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697446 84 + 195804263 aaattcatatctccatgcttaatattttatttgagattcagttccatat--------------taatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734848 84 + 4876863 aaattcatatctccatgcttaatattttatttgagattcagttccatat--------------taatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619068 84 + 115148730 aaattcatatctctatgcttaatattttatttgagattcagttccgtat--------------taatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903865 84 + 190429646 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851306 84 + 189454096 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232755 84 - 25927173 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3266841 84 + 4669795 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgata-t--------------gtctactgga-ttccccagaggcatcttaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224037 84 + 135778131 aaattcatatctccatgcttaatattttatttgagattcagttccatat--------------tgatg-t--------------gtctactgga-ttccccaGAGGCATCTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654605 84 - 2847728 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgata-t--------------gtctactgga-ttccccagaggcatcttaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786788 84 + 2368649 aaattcatgtctccatgcttaatattttatttgagattcagttccatat--------------tgatg-t--------------gtctactgga-ttccccaGAGGCATCTCAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547638 82 - 190850796 agatttgtatctccaagctaaatgttttctttgagattcagttctatat--------------TGATG-T--------------GTGTAC--AA-TTCCCCACAGGCATCTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038038 75 - 14256875 agatttgtatctcc-------aTGCTTTCTTTGAGATTCACTTCTATAT--------------TGATG-T--------------GTGTAC--AA-TTCCCCACAGGCATCTTAA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3320378 82 - 5030052 aaatttgtatctccaTGTGTAATATTTTCTTTGAGATTCAGTTCTATAT--------------TGATG-T--------------GTGTAC--AA-TTCCCCACAGGCATCTTAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17459881 84 - 93316391 acatttatatctccgtgcttaatctcttcttttagattcagttctatat--------------cgatg-t--------------agctaccgga-tttcccacaggcatattaa i micMur3.chr14 C 0 I 1240 s otoGar3.GL873580 11165510 85 - 11315646 aaatttatatctccaagcttaacctcttctttgagattcagTGCTATAT--------------TGATG-T--------------AGCTAGTGGATTTTCCTACGGGCATCTTAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86502879 77 - 129401213 AAAATCGTCTCTCTAGACTTAACCTTTTCTCTTAGATTTAGTTGCA---------------------A-T--------------ATCTTCTGGA-TACTTCATAGACATCTTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16860917 99 - 59632846 aaattcatatctctattcctaatctctcccttgagactcggttgtgtatctgtctgtgactagtgatgtt--------------atctactgga-tttcccgtaggcattttaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1352088 96 - 2520184 -AATTCATACCTTCATGTCTAATCTCTTCTTCAGGAGCCAGTTGTACAT--------------TTATT-TCTGAATACTGACCAATCCACTGGT-TTTCCCAT-GGTACCTTAA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I a score=62361.000000 s hg38.chr4_KI270789v1_alt 20728 5 + 205944 TATGG s panTro5.chr4 192813042 5 + 194502333 TATGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697530 5 + 195804263 TATGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734932 5 + 4876863 TATGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619152 5 + 115148730 TATGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903949 5 + 190429646 TATGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851390 5 + 189454096 TATGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24232839 5 - 25927173 TATGG i macNem1.NW_012013133v1 C 0 I 328 s cerAty1.NW_012001672v1 3266925 5 + 4669795 TATGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224121 5 + 135778131 TATGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654689 5 - 2847728 tatgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786872 5 + 2368649 TATGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547720 5 - 190850796 TATGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038113 5 - 14256875 TATGG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3320460 5 - 5030052 TATAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165595 5 - 11315646 TATGG i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86502956 5 - 129401213 TATGG i mm10.chr8 C 0 C 0 s canFam3.chr16 16861016 5 - 59632846 gatgt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1352184 5 - 2520184 CGTAA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I a score=52294.000000 s hg38.chr4_KI270789v1_alt 20733 7 + 205944 ATAAA---AA s panTro5.chr4 192813047 7 + 194502333 ATAAA---AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697535 7 + 195804263 ATAAA---AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734937 7 + 4876863 ATAAA---AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619157 7 + 115148730 CTAAA---AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903954 7 + 190429646 CTAGA---AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851395 7 + 189454096 CTAGA---AA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3266930 7 + 4669795 CTAGA---AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224126 7 + 135778131 CTAGA---AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654694 7 - 2847728 ctaga---aa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786877 7 + 2368649 CTAAA---AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547725 7 - 190850796 CTAAA---AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038118 7 - 14256875 CTAAA---AA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3320465 7 - 5030052 CTAAA---AA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165601 7 - 11315646 TTGAA---AC i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86502961 10 - 129401213 CCAAACCCAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16861021 10 - 59632846 ttaaaaacaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1352189 7 - 2520184 CTAAA---AA i dasNov3.JH570353 C 0 I 20 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I a score=74708.000000 s hg38.chr4_KI270789v1_alt 20740 9 + 205944 ATTCA----TTTT s panTro5.chr4 192813054 9 + 194502333 ATTCA----TTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697542 9 + 195804263 ATTCA----TTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734944 9 + 4876863 ATTCA----TTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619164 9 + 115148730 ATTCA----TTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903961 9 + 190429646 ATTCA----TTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851402 9 + 189454096 ATTCA----TTTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3266937 9 + 4669795 ATTCA----TTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224133 9 + 135778131 ATTCA----TTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654701 9 - 2847728 actcA----TTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786884 9 + 2368649 ATTCA----TTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547732 9 - 190850796 AATCA----TTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038125 9 - 14256875 AATCA----TTAT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3320472 9 - 5030052 AATCA----TTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165608 13 - 11315646 ATTAGAATTTTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86502971 9 - 129401213 ATTTA----TTTT i mm10.chr8 C 0 I 7 s canFam3.chr16 16861031 9 - 59632846 ataaa----cttt i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I a score=20010.000000 s hg38.chr4_KI270789v1_alt 20749 2 + 205944 TA s panTro5.chr4 192813063 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697551 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734953 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619173 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903970 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851411 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3266946 2 + 4669795 TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224142 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654710 2 - 2847728 TA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786893 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547741 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038134 2 - 14256875 TA i saiBol1.JH378165 C 0 I 8 s aotNan1.NW_018492112v1 3320481 2 - 5030052 TA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165621 2 - 11315646 TA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16861040 2 - 59632846 ta i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e mm10.chr8 86502980 7 - 129401213 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I a score=7847.000000 s hg38.chr4_KI270789v1_alt 20751 1 + 205944 T s panTro5.chr4 192813065 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697553 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734955 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619175 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903972 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851413 1 + 189454096 T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3266948 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224144 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654712 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786895 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547743 1 - 190850796 T i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3320483 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 I 342 s otoGar3.GL873580 11165623 1 - 11315646 T i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16861042 1 - 59632846 t i canFam3.chr16 C 0 I 287 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e mm10.chr8 86502980 7 - 129401213 I e saiBol1.JH378165 13038136 8 - 14256875 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I a score=655113.000000 s hg38.chr4_KI270789v1_alt 20752 131 + 205944 ggccaggcacagtggctcacgcctgtaattccagaactttaggaggccgagg-tgggcggatcatgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtctgtactaaaaatacgaaaa s panTro5.chr4 192813066 131 + 194502333 ggccaggcgcagtggctcacgcctgtaattccagaactttaggaggccaagg-tgggcggatcacgaggtcaggagttcgagaccagcctggccaatatggtgaaaccccgtctgtactaaaaatacgaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697554 131 + 195804263 ggccaggcgcagtggctcacgcctgtaattccagaactttaggaggccaagg-tgggcggatcacgaggtcaggagttcgagaccagcctggccaatatggtgaaaccccgtctgtactaaaaatacgaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3734956 131 + 4876863 ggccgggcgcagtggctcacgcctgtaattccggaactttaggaggccgagg-tgggcggatcacgaggtcaggagttcgagaccagcctggccaatatggcgaaaccctgtctgtactaaaaatacgaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619176 131 + 115148730 ggccaggcgctgtggctcatgcctgtaattccagaactttgggaggcctagg-tgggcggatcatgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccgtctgtactaaaaatacaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188903973 127 + 190429646 ggccaggcgcagtggttcacgcctgtaatcccaaagttct----ggctgaag-tgggcggatcatgaggtcaggagttcaagaccatcctggccaacaaggcgaaaccccatctttactaaaaatacaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851414 127 + 189454096 ggccaggcgcagtggttcacgcctgtaatcccaaagttct----ggctgaag-tgggcggatcatgaggtcaggagttcaagaccatcctggccaacaaggcgaaaccccatctttactaaaaatacaaaaa i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3266949 127 + 4669795 ggccaggcgcagtggttcacgcctgtaatcccaaagttct----ggctgaag-tgggcggatcatgaggtcaggagttcaagaccatcctggccaacaaggcgaaaccccatctttactaaaaatacaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224145 131 + 135778131 ggccaggtgcagtggttcacgcctgtaatcccagaactttgggaggctgaag-tgggcggatcatgaggtcaggagttcaagaccatcctggccaacaaggagaaaccccatctctactaaaaatacaaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654713 127 - 2847728 ggccaggcgcagtggttcacgcctgtaatcccaaagttct----ggctgaag-tgggcggatcatgaggtcaggagttcaagaccatcctggccaactaggcgaaaccccatctttactaaaaatacaaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 786896 132 + 2368649 ggccaggtgcagtggttcacgcctgtaatcccagaactttgggaggctgaagttgggcggatcatgaggtcaggagttcaagaccatcctggccaacaaggcgaaaccccatctttactaaaaatacaaaaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189547744 130 - 190850796 ggctaagcgtggtggctgacacctgtaatcccagcactttgggaggccgagg-cgggtggatcacaatgtcaagagatcgagaccatcctga-caatatggcgaaaccccgtctctactaaaaatacaaaaa i calJac3.chr3 C 0 I 1040 e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I e otoGar3.GL873580 11165624 1 - 11315646 I a score=287849.000000 s hg38.chr4_KI270789v1_alt 20883 63 + 205944 ttagcctggtgtggtggcaggctcctgtagtcccagctacttgggaggctgaggcaggagaat s panTro5.chr4 192813197 63 + 194502333 ttagacgggtgtggtggcaggctcctgtagtcccagctacttgggaggctgaggcaggagaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697685 63 + 195804263 ttagacaggtgtggtggcaggctcctgtagtcccagctacttgggaggctgaggcaggagaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735087 63 + 4876863 ttagccaggtgtggtggcaggctcctgtagtcccagctacttgggaggctgaggcaggagaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619307 63 + 115148730 ttagccgggtgtggtggcaggctcctgtagtcccagctacttgggaggctgaggcaggagaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904100 62 + 190429646 ttagccaggtgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcaggagaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851541 62 + 189454096 ttagccaggtgtggtggc-ggtgcctgtagtcccagctactcaggaggctgaggcaggagaat i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3267076 62 + 4669795 ttagccaggtgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcaggagaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224276 63 + 135778131 ttagccaggtgtggtggtgggtgcctatagtcccagctactcaggaggctgaggcaggagaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654840 62 - 2847728 ttagccaggtgtggtggc-ggcgcctgtagtcccagctactcaggaggctgaggcaggagaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787028 63 + 2368649 ttagccaggtgtggtggtgggtgcctatagtcccagctactcaggaggctgaggcaggagaat i colAng1.NW_012116221v1 C 0 I 155 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I e otoGar3.GL873580 11165624 1 - 11315646 I a score=4553.000000 s hg38.chr4_KI270789v1_alt 20946 5 + 205944 cactt s panTro5.chr4 192813260 5 + 194502333 cactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697748 5 + 195804263 cactt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735150 5 + 4876863 cactt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619370 5 + 115148730 cactt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904162 5 + 190429646 ggtgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851603 5 + 189454096 ggtgt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3267138 5 + 4669795 ggtgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224339 5 + 135778131 ggcgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2654902 5 - 2847728 gatgt i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I e colAng1.NW_012116221v1 787091 155 + 2368649 I e macNem1.NW_012013133v1 24232844 328 - 25927173 I e otoGar3.GL873580 11165624 1 - 11315646 I a score=77594.000000 s hg38.chr4_KI270789v1_alt 20951 13 + 205944 gaacccgggaggc s panTro5.chr4 192813265 13 + 194502333 gaacccgggaggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697753 13 + 195804263 gaacccgggaggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735155 13 + 4876863 gaacccgggaggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619375 13 + 115148730 gaacacgggaggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904167 13 + 190429646 gaacccgggaggc i rheMac8.chr5 C 0 I 166 s macFas5.chr5 187851608 13 + 189454096 gaacccgggaggc i macFas5.chr5 C 0 I 165 s macNem1.NW_012013133v1 24233172 13 - 25927173 gaacccgggaggt i macNem1.NW_012013133v1 I 328 C 0 s cerAty1.NW_012001672v1 3267143 13 + 4669795 gaacccgggaggc i cerAty1.NW_012001672v1 C 0 I 167 s chlSab2.chr7 134224344 13 + 135778131 gaacccgggaggc i chlSab2.chr7 C 0 I 164 s manLeu1.NW_012102221v1 2654907 13 - 2847728 gaacccaggaggc i manLeu1.NW_012102221v1 C 0 I 166 s colAng1.NW_012116221v1 787246 13 + 2368649 gaacccgggaggt i colAng1.NW_012116221v1 I 155 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I e otoGar3.GL873580 11165624 1 - 11315646 I a score=488922.000000 s hg38.chr4_KI270789v1_alt 20964 93 + 205944 ggaggttgcagtgagccaaaacggtgccattgcactccagcctgggcaac-agagtgagaatctgt-cCCCCGCCCCAAAAAAATCATTTTTATA s panTro5.chr4 192813278 93 + 194502333 agaggttgcagtgagccaaaacggtgccattgcactccagcctgggcaac-agagtgagaatccgt-cccCTGCCCCAAAAAAATCATTTTTATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697766 93 + 195804263 ggaggttgcagtgagccaaaacggtgccattgcactccagcctgggcaac-agagtgagaatccgt-cCCCTGCCCCAAAAAAATCATTTTTATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735168 92 + 4876863 ggaggttgcagtgagccaaaacagtgccattgcactccagcctgggcaac-agagtgataatccgt-cCCCCG-CCCAAAAAATTCATTTTTATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619388 94 + 115148730 ggaggttgcagtgagccaaaacggtgccattgcactccagcctgggcaacgagagtgagaatctgt-cCCCTGCCCCCAAAAAATCATTTTTATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904346 91 + 190429646 ggaggttgcagtaagccaaaatggtgccattgcactccagcctgggcgac-agagtgagactccgt-cccCC--CCAAAAAAGATCATTTTTATA i rheMac8.chr5 I 166 C 0 s macFas5.chr5 187851786 91 + 189454096 ggaggttgcagtaagccaaaatggtgccattgcactccagcctgggcgac-agagtgagactccgt-cccCC--CCAAAAAAGATCATTTTTATA i macFas5.chr5 I 165 C 0 s macNem1.NW_012013133v1 24233185 91 - 25927173 ggaggttgcagtaagccaaaatggtgccattgcactccagcctgggcgac-agagtgagactccgt-cccCC--CCAAAAAAGATCATTTTTATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267323 91 + 4669795 ggaggttgcagtaagccaaaatggtgccactgcactccagcctgggcgac-agagtgagactccgt-cccCC--CCAAAAAAGATCATTTTTATA i cerAty1.NW_012001672v1 I 167 C 0 s chlSab2.chr7 134224521 91 + 135778131 ggaggttgcagtaagccaaaatggtgccattgcactccagcctgggcgac-agagtgagactctgt-ccccc--ctaaaaaagaTCATTTTTATA i chlSab2.chr7 I 164 C 0 s manLeu1.NW_012102221v1 2655086 92 - 2847728 ggaggttgcagtaagccaaaatggtgccattgcactccagcctgggcgac-agagtgagactccgtcccCCC--CCAAAAAAGATCATTTTTATA i manLeu1.NW_012102221v1 I 166 C 0 s colAng1.NW_012116221v1 787259 91 + 2368649 ggagattgcagtaagccaaaatggtgccattgcattccagcctgggcaac-agagtgagactccat-ccctc--ccagaaaaaaTCATTTTTATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I e otoGar3.GL873580 11165624 1 - 11315646 I a score=14898.000000 s hg38.chr4_KI270789v1_alt 21057 2 + 205944 AC s panTro5.chr4 192813371 2 + 194502333 AC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697859 2 + 195804263 AC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735260 2 + 4876863 AC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619482 2 + 115148730 AC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904437 2 + 190429646 AC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851877 2 + 189454096 AC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233276 2 - 25927173 AC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267414 2 + 4669795 AC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224612 2 + 135778131 AC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655178 2 - 2847728 AC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787350 2 + 2368649 AC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11165625 2 - 11315646 AC i otoGar3.GL873580 I 1 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I e saiBol1.JH378165 13038136 8 - 14256875 I a score=14599.000000 s hg38.chr4_KI270789v1_alt 21059 2 + 205944 CA s panTro5.chr4 192813373 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697861 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735262 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619484 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904439 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851879 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233278 2 - 25927173 CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267416 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224614 2 + 135778131 CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655180 2 - 2847728 CA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787352 2 + 2368649 CA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13038144 2 - 14256875 CA i saiBol1.JH378165 I 8 C 0 s otoGar3.GL873580 11165627 2 - 11315646 AA i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352196 20 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86502980 7 - 129401213 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I a score=99251.000000 s hg38.chr4_KI270789v1_alt 21061 11 + 205944 CCTACATTTAT s panTro5.chr4 192813375 11 + 194502333 CCTACATTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697863 11 + 195804263 CCTACATTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735264 11 + 4876863 CCTACATTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619486 11 + 115148730 CCTACATTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904441 11 + 190429646 CATACATTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851881 11 + 189454096 CATACATTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233280 11 - 25927173 CATACATTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267418 11 + 4669795 CATACATTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224616 11 + 135778131 CCTACGTTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655182 11 - 2847728 CATACATTTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787354 11 + 2368649 CCTACATTTAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13038146 11 - 14256875 CCTACATTTAT i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11165629 11 - 11315646 TCTGCATTGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86502987 11 - 129401213 CCTACATTCAT i mm10.chr8 I 7 C 0 s dasNov3.JH570353 1352216 11 - 2520184 CCTACATTTAC i dasNov3.JH570353 I 20 C 0 e calJac3.chr3 189547874 1040 - 190850796 I e cebCap1.NW_016107886v1 926616 683 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861043 287 - 59632846 I e aotNan1.NW_018492112v1 3320484 342 - 5030052 I a score=119078.000000 s hg38.chr4_KI270789v1_alt 21072 10 + 205944 TTTACTTCCC s panTro5.chr4 192813386 10 + 194502333 TTTACTTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697874 10 + 195804263 TTTACTTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735275 10 + 4876863 TTTACTTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619497 10 + 115148730 TTTACTTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904452 10 + 190429646 TTCACTTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851892 10 + 189454096 TTCACTTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233291 10 - 25927173 TTCACTTCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267429 10 + 4669795 TTCACTTCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224627 10 + 135778131 TTCGCTTCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655193 10 - 2847728 TTCACTTCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787365 10 + 2368649 TTCACTTCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189548914 10 - 190850796 TTTACTTCCT i calJac3.chr3 I 1040 C 0 s saiBol1.JH378165 13038157 10 - 14256875 TTTACTTCCC i saiBol1.JH378165 C 0 I 317 s cebCap1.NW_016107886v1 927299 10 - 2196201 TTTACTTCCT i cebCap1.NW_016107886v1 I 683 C 0 s aotNan1.NW_018492112v1 3320826 10 - 5030052 TTTACTTTCT i aotNan1.NW_018492112v1 I 342 C 0 s otoGar3.GL873580 11165640 10 - 11315646 TTTACTTCCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86502998 10 - 129401213 TCCCCTTCTT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1352227 10 - 2520184 TTTTCCTGCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861043 287 - 59632846 I a score=569648.000000 s hg38.chr4_KI270789v1_alt 21082 71 + 205944 GTTTTAATGAACGAAGTCAATAGCATTATCG--CTTGC---------ATT---------TTCATTCGGATCCACTCTGC-------------TCCATTCTGTC--C s panTro5.chr4 192813396 71 + 194502333 GTTTTAATGAACAAAGTCAATGGCATTATCG--CTTGC---------ATT---------TTCATTCGGATCCACTCTGC-------------TCCATTCTGTC--C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697884 71 + 195804263 GTTTTAATGAACAAAGTCAATGGCATTATCG--CTTGC---------ATT---------TTCATTCGGATCCACTCTGC-------------TCCATTCTGTC--C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735285 71 + 4876863 GTTTTAATGAACGAAGTCAATGGCATTATCG--CTTGC---------ATT---------TTCATTAGGATCCACTCTGC-------------TCCATTCTGTC--C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619507 71 + 115148730 GTTTTAATGAACAAAGCCAATGGCATTATCA--CTTGC---------ATT---------TTCATTCTGATCTACTCTGC-------------TCCGTTCTGTC--C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904462 71 + 190429646 GTTTGAATGAAGGAAACCAATGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCTTTCTGTC--A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851902 71 + 189454096 GTTTGAATGAAGGAAACCAATGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCGTTCTGTC--A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233301 71 - 25927173 GTTTGAATGAAGGAAACCAATGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCGTTCTGTC--A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267439 71 + 4669795 GTTTGAATGAAGGAAACCAATGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCGTTCTGTC--A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224637 71 + 135778131 GTTTGAAGGAAGGAAACCAATGGCCTTATCA--CCTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCGTTCTGTT--G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655203 70 - 2847728 G-TTGAATGAAGGAAACCAATGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCGTTCTGTC--A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787375 71 + 2368649 GTTTGAATGAAGGAAATCAGTGGCCTTATCA--CTTGC---------ATT---------TTCATTCTGATCCAGTCTGC-------------TCCATTCTGTC--C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189548924 70 - 190850796 GTTTCGATGAACTAAGTTAACAGCATTATCA--CTTAC---------ATT---------TTCATTCTGACCTGCTCGGC-------------TCCATTCTGTC--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038484 69 - 14256875 GTTTTAATGAACTAAGTT-ACGGCATTATCA--CTTGT---------GTT---------TTCATTCTGGCCCACTTGGC-------------TCCATTCTGTC--- i saiBol1.JH378165 I 317 C 0 s cebCap1.NW_016107886v1 927309 71 - 2196201 GTTTTAATGAACTAAGTTAATGGCATTATCA--CTTGT---------GTT---------TTCATTCTGACCTACTCGGC-------------TCCATTCTGTCC-- i cebCap1.NW_016107886v1 C 0 I 1048 s aotNan1.NW_018492112v1 3320836 71 - 5030052 GTTTTAATGAACTAAGTTAACGGCATTATCA--CTTGC---------GTT---------TTCATTCTGACTTACTCAGC-------------TCCATTCTGTC-C- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165650 93 - 11315646 GTGTTAATGAAGTCAGTGAACAGGATCATCA--CCTTCCCAGCCGCGCTC---------TCCATCCCACATCGCTGTGCCGTGGAGTTCTATCCCATTCTGTT--C i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86503008 81 - 129401213 -GTTCAACAAAATCAGTTAATGGTATGACCAACCTTGC---------TTTCTATTGTGATCCATGCTGATATACTCTGC-------------TCCATTTAGTT--T i mm10.chr8 C 0 I 5 s dasNov3.JH570353 1352237 46 - 2520184 GTTTTATTGATACCAGTTAATAGCATCACAA--CCTTT----------CC---------AACATTCT--------------------------------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861043 287 - 59632846 I a score=1360712.000000 s hg38.chr4_KI270789v1_alt 21153 157 + 205944 CGTGTCCTCTTGTTCACCTGCAAATCCACGTAGTTGCTGAGTTTCAGCCTATTCC-----------ATCTCAGGGCAGAGC---------CACTGCTTGG----ACTTCCACGGCTTCACCTCAGACCCTCATCCGATGCTGCCTTGGCTATTCCAGGAAACTGCTCTCTGCTTCTAGtct s panTro5.chr4 192813467 157 + 194502333 CGTGTCCTCTTGTTCACCTGCAAATCCACGTAGTTGCTGAGTTTCAGGTTATTCC-----------ATCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCATGGCTTCACCTCAGACCCTCATCCGATGCCGCCTTGGCTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192697955 157 + 195804263 CGTGTCCTCTTGTTCACCTGCAAATCCACGTAGTTGCTGAGTTTCAGGTTATTCC-----------ATCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCATGGCTTCACCTCAGACCCTCATCCGATGCCGCCTTGGCTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735356 157 + 4876863 CGTGTCCTCTTGTTCACCTGCAAATCCACGTAGTTGCTGAGTTTCAGGCTATTCC-----------ATCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCATGGCTTCACCTCAGACTCTCATCCGATGCCACCTTGGCTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619578 157 + 115148730 TATGTCCTCTTGTTCACCTGCACATCCACGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTGCACTGCTTCACCTCAGACCCTCATCCGATGCCGCCTTGGCTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904533 157 + 190429646 CATGTCCTCTTGTTCACCTGCACATCCATGTAGTTGCTGAGTTTCAGGCTGTTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTCATCAGTTGCTGCCTTTGTTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187851973 155 + 189454096 CATGTCCTCTTGTTCACCTGCACATCCATGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTCATCAGTTGCTGCCTTTTT--TTCCAGGAAACTGCTCTCTGCTTCTAGtct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233372 157 - 25927173 CATGTCCTCTTGTTCACCTGCACATCCATGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTTATCAGTTGCTGCCTTTGTTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267510 157 + 4669795 CATGTCCTCTTGTTCACCTGCACATCTATGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTCATCAGTTGCTGCCTTTGTTATTCCAGGAAACTGCTCTCTGCTTCTAGtct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224708 157 + 135778131 CATGTCCTCTTGTTCACCTGCACATCTGTGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTCAGCAGATGCTGCCATCGTTATTCCAGGAAACTGCTCTCTGCTTCTAGTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655273 157 - 2847728 CATGTCCTCTTGTTCACCTGCACATCCATGTAGTTGCTGAGTTTCAGGCTATTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCATACCCTCATCAGTTGCTGCCTTTGTTATTCCAGGAAACTGCTCTCTGCTTCTAGTCc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787446 157 + 2368649 CATGTCCTCTTGTTCACCTGCACATCCATGTAGTTGCTGAATTTCAGGCTGTTCC-----------GTCTCAGGGCAGAGC---------CACTGCTCTG----ACTTCCACTGCTTCACTTCAGACCCTCATCAGATGCTGCCTTCGTGATGCCAGGAAACTGCTCTCTGCTTCTAGtct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189548994 155 - 190850796 CACGTCCTCTTGCTCCCCTGCACAAGCACGTGG-TGCCGAGTTTCCGGCCATTCT-----------GCCTT-GGGCAGAGC---------CCCTGCTCTG----ACTTCCACTGCTTCGCTTCAGAGCCACATCAGATGCTGCCTTGGCTATGACAAGAAACTGCTCTGTGcttcttgtct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038553 155 - 14256875 CACGTCCTCTTGCTCACCTGCACAACCACGTGG-TGCTGAGTTTCTGGCCATTCT-----------GCCTT-GGGCAGAGC---------CCCTGCTCTG----ACTTCCTCTGCTTCACTTCAGAGACACAGCAGATGCTGCCTTGGCCATAACAAGAAACCGCTCTGTGCTTCTCATCT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3320907 154 - 5030052 -ACGTCCTCTTGCTCACCTGCACAACCACGTGG-TGCTGAGTTTCCGGCCATTCT-----------GTCTT-GGGCAGAGC---------CCCTGCTCTG----ACTTCCACTGCTTCACTTCAGAGCCACATCAGATGCTGCCTTGGCTATGACAAGAAACCGCTCTGTGcttcttgtct i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165743 147 - 11315646 --TGTTCTCTTGTTTGCTTACACATCCACCCAGTTGCCGGATTTCAGGCTATTCT-----------GTGTCAGGCTGGTTCGGACCTGAGCACTGCTCTG------TGCCACGG--TCACCCC----CCACACTGGATTCTCC---------GGCGGGAAGCTCCTCCCCACCTCCAGCCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86503094 165 - 129401213 TGTACCCTCT---TCACTTACATATCTATCCAGCTGTCAACTTTCAGCTGATGCCTTCTCAAATATGTCTCAGACTCAAGC---------CATTCCTTTT----CTGGACACAATTTTATTCTAAATTTTCATTGACTATTTCAGTGACTATTACAAGAAGCTCTACCCTACTTCTAGCCT i mm10.chr8 I 5 C 0 s dasNov3.JH570353 1352283 158 - 2520184 TGTCTTGTCTAGACCACAT-----------CGGTTACCACATTTCCATCTATTCTCCACAGACCTGCCCCTTGAACAGAGC---------CATTCTTCTGTTGGAGTGTCACCATCTTACTTCAGACTCTTA--AAATGTCAC-TGGGCTGTTACAATAAACTAAACACTGCCTCTAGACT i dasNov3.JH570353 C 0 I 2 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861043 287 - 59632846 I a score=8725.000000 s hg38.chr4_KI270789v1_alt 21310 1 + 205944 t s panTro5.chr4 192813624 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698112 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735513 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619735 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904690 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852128 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233529 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267667 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224865 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655430 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787603 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549149 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038708 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3321061 1 - 5030052 t i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165890 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86503259 1 - 129401213 C i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I a score=23244.000000 s hg38.chr4_KI270789v1_alt 21311 3 + 205944 atc s panTro5.chr4 192813625 3 + 194502333 atc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698113 3 + 195804263 atc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735514 3 + 4876863 atc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619736 3 + 115148730 atc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904691 3 + 190429646 atc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852129 3 + 189454096 atc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233530 3 - 25927173 atc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267668 3 + 4669795 atc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224866 3 + 135778131 ACc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655431 3 - 2847728 atc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787604 3 + 2368649 atc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549150 3 - 190850796 acc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13038709 3 - 14256875 ACc i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3321062 3 - 5030052 gcc i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86503260 3 - 129401213 CTC i mm10.chr8 C 0 I 529 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=162834.000000 s hg38.chr4_KI270789v1_alt 21314 17 + 205944 acagctgggaggcaggt s panTro5.chr4 192813628 17 + 194502333 acagctgggaggcaggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698116 17 + 195804263 acagctgggaggcaggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735517 17 + 4876863 acagctgggaggcaggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619739 17 + 115148730 gcagctgggaggcgggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904694 17 + 190429646 acagctgggaggcgggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852132 17 + 189454096 acagctgggaggcgggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233533 17 - 25927173 acagctgggaggcgggt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267671 17 + 4669795 acagctgggaggcgggt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224869 17 + 135778131 acagctgggaggcgggt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655434 17 - 2847728 acagctgggaggcgggt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787607 17 + 2368649 acagctgggaggcgggt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549153 17 - 190850796 acagctgggaggcaggc i calJac3.chr3 C 0 I 13 s saiBol1.JH378165 13038712 17 - 14256875 acagctgggaggcaggt i saiBol1.JH378165 C 0 I 14 s aotNan1.NW_018492112v1 3321065 17 - 5030052 acagctgggaggcaggt i aotNan1.NW_018492112v1 C 0 I 483 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=651277.000000 s hg38.chr4_KI270789v1_alt 21331 93 + 205944 tctcagccatgctcgccccctacctggaaacagactcggggctgttgtggggggcacggtgagagtgagaccggccctctgggttgtgtggga s panTro5.chr4 192813645 93 + 194502333 tctcagccatgctcgccccctacctggaaacagactcggggctgttgtggggggcacggtgggagtgagatcggccctctgggttgtgtggga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698133 93 + 195804263 tctcagccatgctcgccccccacctggaaacagactcggggctgttgtggggggcacggtgggagtgagaccggccctctgggttgtgtggga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735534 93 + 4876863 tctcagccatgctcgccctccacctggaaacagactcggggctgttgtggggggcacagtgggagtgagaccggccctctgggttgtgtggga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619756 93 + 115148730 tctcagccatgctcgccccccacctggaaacagactcgggtctgttgtgcagggcatggtgggagtgagaccagccctctgggttgtggggga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904711 93 + 190429646 tctcagccatgtttgcccccgacttggaaacagactcagggctgttgtggggggcatggtggcagtgagaccggccctctgggttgtatgcga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852149 93 + 189454096 tctcagccatgtttgcccccgacttggaaacagactcagggctgttgtggggggcatggtggcagtgagaccggccctctgggttgtatgcga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233550 93 - 25927173 tctcagccatgtttgcccccgacttggaaacagactcagggctgttgtggggggcatggtgggagtgagaccggccctctgggttgtatgcga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267688 93 + 4669795 tctcagccatgtttgcccccgacttggaaacagactcagggctgttgtggggggcatggtgggagtgagaccggccctctgagttgtgtgcga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224886 93 + 135778131 tctcagccatgtttgccccccacctggaaacagactcggggctgttgtcgggggcatggtgggagtgagaccggccctctgggttgtgtggga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655451 93 - 2847728 tctcagccatgtttgcccccgacttggaaacagactcagggctgttgtggggggcatggtgggagtgagaccggccctctgggttgtgtgcga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787624 93 + 2368649 tctcagccatgtttgcccccgacctggaaacagactcggggctgctgtggggggcatggtgggagtgagaccggccctctgggttgtgtggga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549183 88 - 190850796 tctcggccgtgctcacccagcacctggaaacag-----gtgatgttgctgggggcacggtgggagtgagactggccctctgggttgcatggga i calJac3.chr3 I 13 I 274 s saiBol1.JH378165 13038743 85 - 14256875 tctcagccatgctcacccaccacctggaaacag-----gtgatgctgctggggg--cggt-ggagtgagactggccctctgggttttgtggga i saiBol1.JH378165 I 14 I 576 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e aotNan1.NW_018492112v1 3321082 483 - 5030052 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=230731.000000 s hg38.chr4_KI270789v1_alt 21424 38 + 205944 tccgcccgatactgccacagctgatgctgtcttgaaag s panTro5.chr4 192813738 38 + 194502333 tccgcccgatactgccacagctgatgctgtcttgaaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698226 38 + 195804263 tccgcccgatactgccacagctgatgctgtcttgaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735627 38 + 4876863 tccgcccgatactgccacagctgatgctgtcttgaaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619849 38 + 115148730 tcctcccgatactaccacagctgatgctttcttgaaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904804 38 + 190429646 tcctccccatcctaccagagctgatgctgtcttcaaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852242 38 + 189454096 tcctccccatcctaccagagctgatgctgtcttcaaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233643 38 - 25927173 tcctccccatcctaccagagctgatgctgtcttcaaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267781 38 + 4669795 Tcctccccatcctaccagagctgatgctgtcttcaaag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134224979 38 + 135778131 Tcctccccatagtaccagagctgatgctctcttgaaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655544 38 - 2847728 Tcctccccatcctaccagagctgatgctgtcttcagag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787717 38 + 2368649 tcctccccatgctaccagagctgatgctctcttgaaag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549545 38 - 190850796 tcctccccatactaccacagtggatgctctctagacca i calJac3.chr3 I 274 C 0 s saiBol1.JH378165 13039404 38 - 14256875 tcctccccatgctaccacagtggacactctctggacca i saiBol1.JH378165 I 576 C 0 e cebCap1.NW_016107886v1 927380 1048 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e aotNan1.NW_018492112v1 3321082 483 - 5030052 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=2944620.000000 s hg38.chr4_KI270789v1_alt 21462 329 + 205944 caccacctcccagcaggagcccaaccagcacacaaatagtgcactaaacaaccaaagctaaggaccctcacagagtccacttcac-cctcctgccgcctccaccagagcaggtgctggtatccatggctgggagacccacagatgtttcacatcacaggactc--tgcagacaaccctctttaccagcccatagcctggcagacttgctgggtggctagacccagaagagaaaaaacaatcactgcagttcggctctcaagaagccacatccctaggaaaagggggaga--gtactacatcaagggaaca-cccatgggacaaaagactctgaac s panTro5.chr4 192813776 329 + 194502333 caccacctcccagcaggagcccaaccagcacaaaaatcgtgcactaaacaaccaaagctaaggaccctcacagagtccacttcac-cctcctgctgcctccaccagagcaggtgctggtatccatggctgggagacccacagatgtttcacatcacaggactc--tgcagacaaccccctttaccagcccatagcctggtagacttgctgggtggctagacccagaagagaaaaaacaatcactgcagttcggctctcaggaagccacatccctaggaaaagggggaga--gaactacatcaagggaaca-cccatgggacaaaagactctgaac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698264 329 + 195804263 caccacctcccagcaggagcccaaccagcacaaaaatcgtgcactaaacaaccaaagctaaggaccctcacagagtccacttcac-cctcctgctgcctccaccagagcaggtgctggtatccatggctgggagacccacagatgtttcacatcacaggactc--tgcagacaaccccctttaccagcccgtagcctggtagacttgctgggtggctagacccagaagagaaaaaacaatcactgcagttcggctctcaggaagccacatccctaggaaaagggggaga--gaactacatcaagggaaca-cccatgggacaaaagactctgaac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735665 329 + 4876863 caccacctcccagcaggagcccaaccagcacaaaaatcgtgcactaaacaaccaaagctaaggacactcacagagtccacttcac-cctcctgccgcctccaccagagcaggtgctggtatccatggctgggagacccacagatgtttcacatcacaggactc--tgcagacaaccgtctttaccagcccgtagcctggtagacttgctgggtggctagacccagaagagaaaaaacaatcactgcagttcggctctcaggaagccacatccctaggaaaagggggaga--gtactacatcaagggaaca-cccatgggacaaaagactctgaac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112619887 329 + 115148730 caccacctcccagcagaagcccaaccagcacaaaaatcatgcattaaacaaccaaagctaaggaccctcacagagtccacttcac-cctcctgccgcctccaccagagcaggtgctggtatccatgactgggagacccacagatggttcacatcacaggactc--tgcagacaaccccctttcccagccccgagcctggtagacttgctgggtggctagacccagaagagaaaaaacaatcactgcagttcggctctcaggaagccacatccctaggaaaagggggaga--gcactacatcaagggaaca-cccatgggacaaaggactctgaac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188904842 331 + 190429646 caccacctcccagcaggagaccaaccagcacaaaaatagtgcattaaacaactaaagctaaggactctcacagagtccatttcac-ccccatgccacttccaccagagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacaaccccctttaccagcctggagcctggtagacttgctgggtggctacatacagaagagagacaacaatcactgcagctcagctcccaggaagccacatctctaggaaaagggggaga--gtgctacatcaagggaaca-cgcatgggatgaaagactctgaac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852280 331 + 189454096 caccacctcccagcaggagaccaaccagcacaaaaatagtgcattaaacaactaaagctaaggactctcacagagtccgtttcac-ccccatgccacttccaccatagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacaaccccctttaccagcctggagcctggtagacttgccgggtggctacatacagaagagagacaacaatcactgcagctcagctcccaggaagccacatctctaggaaaagggggaga--gtgctacatcaagggaaca-cgcatgggatgaaagactctgaac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24233681 330 - 25927173 caccacctcccagcaggagaccaaccagcacaaaaatagtgcattaaa-aactaaagctaaggactctcacagagtccatttcac-ccccatgccacttccaccagagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacaaccccctttaccagcctggagcctggttgacttgctgggtggctacatacagaagagagacaacaatcactgcagctcagctcccaggaagccacatctctaggaaaagggggaga--gtgctacatcaagggaaca-cgcatgggatgaaagactctgaac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3267819 331 + 4669795 caccacctaccagcaggagaccaaccagcacaaaaatagtgcattaaacaactaaagctaaggactctcacagagtccatttcac-tcccatgccacttccaccagagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacaaccccctttaccagcctggagcctggtagacttgctgggtagctacatacagaagagagacaacaatcactgcagctcagctcccaggaagccacatctctaggaagagggggaga--gtgctacatcaagggaaca-cgcatgggacgaaagactctgaaa i cerAty1.NW_012001672v1 C 0 I 559 s chlSab2.chr7 134225017 331 + 135778131 caccacctcccagcgggagaccaaccagcacaaaaatagtgcattaaacaaccaaagctaaggactctcacagagtccatttcac-ccccgtgccacttccaccagagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaagactctgtgcagacaaccccctttaccagcctggagcctggtagacttgctgggtggctacatacagaagagagacaacaatcactgcagctcagctcccaggaaaccacatccctaggaaaagggggaga--gtgctacatcaagggaaca-cctatgggacaaaagactctgaac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2655582 331 - 2847728 caccacctcccagcaggagaccaaccagcacaaaaatagtgcattaaacaactaaagctgaggactctcacagagtccatttcac-ccccatgccacttccaccagagcaggtgctggcgtctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacaaccccctttaccagcctggagcctggtagacttgctgggtagctgcatacagaagagagacaacaatcactgcagctcagctcccaggaagccacgtctctaggaagagggggaga--gtgctacatcaagggaaca-cgcatgggacgaaagactctgaac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 787755 332 + 2368649 caccacctcccagcaggagaccaaccagtgcaaaaatcgtgcattaaacaaccaacgctaaggactctcacaaagtccatttcac-ccccgagccacttccgccagagcaggtgctggcatctgtggctgggagacccacagatggttcacatcacaggactctgtgcagacacccccctttaccagcctggagcctggtagacttgct-ggtggctagatacagaagggagacaacaatcactgcggctcagctcccaggaagccacatccctaggaaaagggggagaatatgctacatcaagggaaca-cctatgggacgaaagactctgaac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189549583 331 - 190850796 caccacctcctgacaggagaccaaccagcacaaaaatagagcattcaacgaccaaagctaagaacccccacagactccatttcacgccccctgccacttctactggagcaggtgctggtattcatggctgggaggtccacagacagtgcacatcacaggactcagtgcagacaacccccagtaccagcccaaaggctggtagacttgctggatggctggatcctgaagaaaggtaacagtcaccacagctcagctctcaggaagccacatccctaggaagaagggga----attctaaatcaagggaacaccccgtggaacagaatgatctgaac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13039442 323 - 14256875 caccacctcctgacgggagaccaaccagcacaaaaatagagcattcaacaaccaaagcaaagaacccccatggagtgcatttta--ccccctgccacttctaccagagcgggtgctggtattcacggccgggagacccacagacggttcacatcacaggactcagtgcagacaacccccagtaccagcccaaaggctggtagacttgctggatggcta------gaagacaggtaacagccaccacagctcggctctcaggaagccacatccctaggaagaagggga----actctacatcaagggaacaccccatggaacaaattgatctgaac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 928428 317 - 2196201 caccacctccagacaggagcccaaccagcacaaaaatagagcattccacaaccaaagctaaggacccccacagagtccatttca--ccccctgccacttctaccagagcaggtgctggtattcacggccgagagacccctggatggttcacatcacaggactcagtgcagacaagccccagtaccagcccaaaggctggtagacttgctgcatggctggacccagaagacaggtaacagtcaccacagcttggctctcaggaagccacatccctaggaagaagggga----attctacctcaag------------ggaacaaaatgatctgaac i cebCap1.NW_016107886v1 I 1048 C 0 s aotNan1.NW_018492112v1 3321565 330 - 5030052 caccacctcctgacaggtgaccaaccagcacaaaaatagagcattcaacaaccaaagctaagaaccgccacagagtccatctgac-ccccctgccacttctaccagagcaggtgctggtattcatggccagaagacccacagatggttaacatcacgggactcagtgcagacaacccccagtaccagcccaaagcctggtagacttgctggatgactagatccagaagacaggtaacagtcaccacagctcggctctcaggaagccacatccctaggaagagggtga----attctacatcaagggaacaccccgtggaacaaaatgatctgaac i aotNan1.NW_018492112v1 I 483 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=2174795.000000 s hg38.chr4_KI270789v1_alt 21791 240 + 205944 aacagccttcagccccagaccttccctctgacacagcctacacaaatgagaaggaaccagaaaaccaactctggtaatatgacaaaacaagtttctttaaca-ccccc--caaaatcacactagctcaccagcaatggatccaaaccaagaagaaatccctgattaacctgaaaagaattcagaaggttagttattaagctaaccagggagggctccagagaaaggcaaagcccaatttaagg s panTro5.chr4 192814105 240 + 194502333 aacagccttcagccccagaccttccctctgacagagcctacacaaatgagaaggaaccagaaaaccaactctggtaatatgacaaaacaagtttctttaaca-ccccc--caaaatcacactagctcaccatcaatggatccaaaccaagaagaaatccctgattaacctgaaaagaattcagaaggttagttattaagctaaccagggagggctccagagaaaggcaaagcccaatttaagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698593 239 + 195804263 aacagccttcagccccagaccttccctctgacagagcctacacaaatgagaaggaaccagaaaaccaactctggtaatatgacaaaacaagtttctttaaca--cccc--caaaatcacactagctcaccatcaatggatccaaaccaagaagaaatccctgattaacctgaaaagaattcagaaggttagttattaagctaaccagggagggctccagagaaaggcaaagcccaatttaagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3735994 240 + 4876863 aacagccttcagccccagaccttccctctgacagagcctacacaaatgagaaggaaccagaaaaccaactctggtaatacgacaaaacaagtttctttaaca-ccccc--caaaatcacactagctcaccagcaatggatccaaaccaagaagaaatccctgattaacctgaaaagaattcagaaggttagttattaagctaaccagggagggctccagagaaaggcaaagcccaatttaagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112620216 240 + 115148730 cacagccttcagccctagaccatccctctgtcagagcctacacaaatgagaaggaaccagaaacccaaccctggtaatatgacaaaacgaggttctttaaca-ccccc--caaaatcacactagctcaccagcaatggatccaaaccaaggagaaatccctgattaacctgaaaagaattcagaagattagttattaagctaaccagggagggctccagagaaaggcaaagcccaatttaagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905173 240 + 190429646 aacagccttcagccctagaccttccctctgacagagccttcacaaacgagaaggtaccagaaaaccaactctggtaatatgacaaaacaaggtcctttaaca-ccccc--caaaatcacactaggtcaccagcaacggatccaaaccgagaagaaatccctgattaacctgaaaggaattcagaaggttagttattaagctaaccaggtagggctccagggaaaggcaaagcccaatttaaag i rheMac8.chr5 C 0 I 16 s macFas5.chr5 187852611 240 + 189454096 aacagccttcagccctagaccttccctctgacagagccttcacaaacgagaaggtaccagaaaaccaactctggtaatatgacaaaacaaggtcctttaaca-ccccc--caaaatcacactaggtcaccagcaacggatccaaaccgagaagaaatccctgattaacctgaaaggaattcagaaggttagttattaagctaaccaggtagggctccagggaaaggcaaagcccaatttaagg i macFas5.chr5 C 0 I 17 s macNem1.NW_012013133v1 24234011 240 - 25927173 aacagccttcagccctagaccttccctctgacagagccttcacaaacgagaaggtaccagaaaaccaactctggtaatatgacaaaacaaggtcctttaaca-ccccc--caaaatcacactaggtcaccagcaacggatccaaaccgagaagaaatccctgattaacctgaaaggaattcagaaggttagttattaagctaaccaggtagggctccagggaaaggcaaagcccaatttaagg i macNem1.NW_012013133v1 C 0 I 22 s cerAty1.NW_012001672v1 3268709 240 + 4669795 aacagccttcagccctagaccttccgtctgacagagccttcacaaacgagaaggaaccagaaaaccagctctggtaatatgacaaaacaaggtcctttaaca-ccccc--caaaatcacactaggtcaccagcaacgaatccaaaccgagaagaaatccctgattaacctgaaaggaattcagaaggttagttattaagctaaccaggtagggctccagggaaaggcaaagcccaatttaagg i cerAty1.NW_012001672v1 I 559 I 21 s chlSab2.chr7 134225348 238 + 135778131 -acagccttcagccctagaccttccctctgacagagccttcacaaatgagaaggaaccagaaaaccaactctggtaatatgacaaaacaaggttctttaaca-ccccc--caaaatcacactagttcaccagcagtggatccaaactgagaagaaatccctgattaacctgaaaggaattcagaagcttagttattaagctaaccaggtagggctcca-gaaaaggcaaagttaaatttaagg i chlSab2.chr7 C 0 I 21 s manLeu1.NW_012102221v1 2655913 241 - 2847728 aacagccttcagccctagaccttccctctgacagagcctgcacaaacgagaaggaaccagaaaaccaactctggtgatatgataaaacaaggtcctttaacacccccc--caaaatcacactaggtcaccagcaacggatccaaaccgagaagaaatccctgattaacctgaaaggaattcagaaggttacttattaagctaaccaggtagggctccagggaaaggcaaagcccaatttaagg i manLeu1.NW_012102221v1 C 0 I 181 s colAng1.NW_012116221v1 788087 239 + 2368649 aacagccttcagccctagaccttccctctgtcagagccttcacaaatgagaaggaaccagaaaaccaactctggtaatatgacaaaacaaggttctttaaca-ccccc--caaaatcacactagctcaccagcaaaagatccaaaccaagaagaaatcgctgattaacctgaaaggaattcagaaggttagttattaagctaaccaggtagggctcca-gaaaaggcaaagcccaatttaagg i colAng1.NW_012116221v1 C 0 I 5 s calJac3.chr3 189549914 228 - 190850796 aacagctttgagctctagactttccctctgacagagcctgcccggatgaaaggg------------aactctggtaatacgacaaaacacgattccttaaca-cccct-aaaaaatcacactagctcaccagcaatggatccctaccaagaagaaatccctgatttacctggaaataattcagaaggttagttattaagttaatcaggga-ggcaccaatgaaatacaaagaccaatttaagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13039765 228 - 14256875 aacagccttgagctctagaccatccctctgacagagcctacccaaatgaaaagg------------aactctggtaatacgacaaaacgaggttcttaaaca-cccctaaaaaaatcacactagcttcccagcaatggatcctaacc-agaagaaatccctgatttacctggaagtaattcagaaggttagttactaagttaatcaggga-ggcaccagagaaaggcaaagcccaatttaagg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 928745 229 - 2196201 aacagccttgagctctagaccttccctctgacagagcctacccaaatgaaaagg------------cactctggtaatacaacaaaacaagattctttaaca-cccctaaaaaaatcccactagctcaccagcaatggatcccaatcaagaagaaatccctgatttacctggaaacaattcagaaggttagttattaagttaatcaggga-ggcaccagagaaaggcaaagcccaatttaagg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3321895 227 - 5030052 aacaaccttgagctctagaccttccctctgacagagcctacccaagtgaaa-gg------------aactctgataatatgacaaaacaaggttctttaaca-cccctaaaaaaatcacactagctcaccagcaatggattccaacc-agaagaaatccctgatttacctggaaataattcagaaggttagttattaagttaatcaggga-ggcaccagagaagggcaaagcccaatttaagg i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=76548.000000 s hg38.chr4_KI270789v1_alt 22031 18 + 205944 aagt---aaaaaaaaa----tgaca s panTro5.chr4 192814345 22 + 194502333 aagt---aaaaaaaaaaaaatgaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698832 17 + 195804263 aagt---aaaaaaata-----gaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736234 18 + 4876863 aagt---aaaaaaaaa----tgaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112620456 19 + 115148730 aagt---aaaaaaaaa---atgaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905429 18 + 190429646 aaac---aaaaaaaca----aaaaa i rheMac8.chr5 I 16 C 0 s macFas5.chr5 187852868 18 + 189454096 aaac---aaaaaaaca----aaaaa i macFas5.chr5 I 17 C 0 s macNem1.NW_012013133v1 24234273 18 - 25927173 aaac---aaaaaaaca----aaaaa i macNem1.NW_012013133v1 I 22 C 0 s cerAty1.NW_012001672v1 3268970 20 + 4669795 aaacca-aaaaaaaca----aaaaa i cerAty1.NW_012001672v1 I 21 C 0 s chlSab2.chr7 134225607 18 + 135778131 aaac---aaaaaaaaa----caaca i chlSab2.chr7 I 21 I 22 s colAng1.NW_012116221v1 788331 18 + 2368649 aaac---aaacaaaca----aaaca i colAng1.NW_012116221v1 I 5 I 36 s calJac3.chr3 189550142 18 - 190850796 aaat---aaaaaaaaa----tgaca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13039993 21 - 14256875 aagtaaaaaaaaaaaa----tgaca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 928974 17 - 2196201 aag----aaaaaaaaa----tgaca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3322122 21 - 5030052 aagtaaaaaaaaaaaa----tgaca i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e manLeu1.NW_012102221v1 2656154 181 - 2847728 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=4233911.000000 s hg38.chr4_KI270789v1_alt 22049 448 + 205944 caagaaatgagggcagaaactttcaatgaaatagatagcataaataaaaaagaatcaaaacttcaggaaacaatggacacac----agaaatgcaaaatgctct--ggaaagtctcagcagtagactcgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatgcaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattgtgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataatcgaggaatacttccctgactttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggaaattcaccacaaaaagatgattgcctaggcacatggtcatcaggtt s panTro5.chr4 192814367 448 + 194502333 caagaaatgagggcagaaactttcaatgaaatagatagcataaataaaaaagaatcaaaacttcaggaaacaatggacacac----agaaatgcaaaatgctct--ggaaagtctcagcagtagactcggacaagcagaagaaagaacttcagagctcaaagacaaggtttttgaattaacccaatgcaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattgtgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataatcgaggaatacttccctgactttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggaaattcaccacaaaaagatgattgcctaggcacatggtcatcaggtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192698849 448 + 195804263 caagaaatgagggcagaaactttcaatgaaatagatagcataaataaaaaagaatcaaaactttaggaaacaatggacacac----agaaatgcaaaatgctct--ggaaagtctcagcagtagactcggacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatgcaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattgtgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataatcgaggaatacttccctgactttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggaaattcaccacaaaaagatgattgcctaggcacatggtcatcaggtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736252 448 + 4876863 caagaaatgaaggcagaaactttcaatgaaatagatagcataaataaaaaagaatcaaaacttcaggaaacaatggacacac----agaaatgcaaaatgctct--ggaaagtctcagcagtagactcgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatgcaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattgtgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataatcgaggaatacttccctgactttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggaaattcaccacaaaaagatgattgcctaggcacatggtcatcaggtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112620475 450 + 115148730 caagaaattagggcagaaattttcaatgaaataaacagcataaataaaaaagaatcaaaacttcaggaaacagtggacacac----agaaatgcaagatgctctgaggaaagtctcagtagtagactcgaacaagcagaagaaagaacttcagagctcaaagacaaggtttttgaattaacccaatccaacaaagacaaag-aaaaaagaa-gaagaatatatgaacaaagcctccaagaagtctgggattatgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataatcgaggaatacttccctggccttgctagaaacctggacatccaaatacaagaagcacaaagaacacctgggaaattcatcacaaaaagatgatcgcctaggtatatgttcatcaggtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905447 448 + 190429646 caagaaatgagggcagaaattttcaatgaaatggatagcataaataaaaaagaatcaaaacttcaggaaacaatgggcacac----agaaatgcaaaatgctct--ggagagtttctgcagtagactggaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaag-aaaaaagaa-gaagaatatatgaacaaagcctccaagaagtctgggattttgttaaatgaccaaacctaagaaaaattggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataattgaggaaaacttccccagccttgctagagacctggacatccaaatacaacaagcacaaagaacacctgggagattcatcacaaaaagatgattgcccagacacgtcgtcatcaggtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187852886 448 + 189454096 caagaaatgagggcagaaattttcaatgaaatggatagcataaataaaaaagaatcaaaacttcaggaaacaatgggcacac----agaaatgcaaaatgctct--ggagagtttctgcagtagacttgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctaggattttgttaaatgaccaaacctaagaaaaattggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataattgaggaaaacttccccagccttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggagattcatcacaaaaagatgattgcccagacacatcgtcatcaggtt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24234291 443 - 25927173 caagaaatgagggcagaaattttcaatgaaatggatagcataaataaaaaagaatcaaaacttcaggaaacaatgggcacac----agaaatgcaaaatgctct--ggagagtttctgcagtagacttgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattttgttaaatgaccaaacctaagaaaaattggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataattgaggaaaacttccccagccttgctagagacct-----tccaaatacaagaagcacaaagaacacctgggagattcatcacaaaaagatgattgcccagacacatcgtcatcaggtt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3268990 447 + 4669795 caagaaatgagggcagaaattttcaatgaaatggatagcataaataaaaaagaatcaaaacttcaggaaacaatgggcacac----agaaatgcaaaatgctct--ggc-agtttcagcagtagacttgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattttgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataattgaggaaaacttccccagccttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggagattcatcacaaaaagatgattgcccagacacatcgtcatcaggtt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134225647 449 + 135778131 caagaaatgagggcagaaattttcaatgaaatagatagcataaataaaaaagaatcagaacttcaggaaacaacggatacac----agaaatgcaaaatgctct--ggaaagtttcaacagtagacttgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaagaaaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattatgttaaatgaccaaagctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaatgtatttgggggaataattgaggaaaacttccccagccttgctagagacctggacatccaaatacaagaagcaaaaagaacacctgggaaattcatcacaaaaagatgattccccaggcacattgtcatcaggtt i chlSab2.chr7 I 22 C 0 s manLeu1.NW_012102221v1 2656335 447 - 2847728 caagaaatgagggcagaaattttcaatgaaatggatagcataaataaaaaagaatcaaaacttcaggaaacaatgggcacac----agaaatgcaaaatgctct--gg-cagtttcagcagtagacttgaacaagcagaagaaagaacttcagagctcaaagacaaggttttcgaattaacccaatccaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaagaagtctgggattttgttaaatgaccaaacctaagaaaaatcggtattccagaggaagaagagaaaaataaaagtttggaaaacatatttgggggaataattgaggaaaacttccccagccttgctagagacctggacatccaaatacaagaagcacaaagaacacctgggagattcatcacaaaaagatgattgcccagacacattgtcatcaggtt i manLeu1.NW_012102221v1 I 181 C 0 s colAng1.NW_012116221v1 788385 426 + 2368649 caagaaatgagggcagaaattttcaatgaa----atagcatagataaaaaagaatcaaaacttcaggaaacaatggacacac----agaaatgcaaaatgctct--ggagagtttcagcagtagacttgaacaaacagaagacagaacttcagagctcaaagacaaggttttcgaattaactcaattcaacaaagacaaag-aaaaaagaa-taagaatatatgaacaaagcctccaaaaagtctgggattatgttaaatgaccaaa------------------tccagaggaagaagagaaaaataaaagtttggaaaacgtatttgggggaataattgaggaaaacttccccggccttgctagagacctggacatcccaatacaagaagcacaaagaacacctgggaaatccatcacgaaaagacgattgcccaggcacatcgtcatcaggtt i colAng1.NW_012116221v1 I 36 C 0 s calJac3.chr3 189550160 441 - 190850796 caagaaatgaggggaaaaatttccaatgaa----acagcataaataaaaaagagt-aaaacttcaggaaatga---acacacttatagaaatgcaaaa-gctct--ggaaagtctcagcaatagattcaaacaagcagaa-aaaggacttcagagctcaaagacaaggttcgcaaattaacccaatctgacaaagacatag-acaaaagaa-taagaaaatatgaacaaagactccgagaagtctgggattatgttaaatgaccaaacctgagaattattggtgttcctgaggaagaagagaaatctaaaagtttggaagacatatttggggaaataattgaggaaaatttccctggccttgctagagacctagacatccaaatacacgaagctc-aagaacacctgggaaattcatcacaaacagatgatcgcctaggcacattgtcatgaggtt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13040014 446 - 14256875 caagaaatgaggggaagaatttccaatgaa----ataccataaataaaaaagaat-aaaacttcaggaaatgatggacacacttaaagaaatgcaaaa-gctct--gtaaagtctcagcaatagatttaaacaagcagaataaaggacttcagagctcaaagacaaggttctcaaattaacccaatctgagaaagacaaag-aaaaaagaattaagaaaatacgaacaaagactccgagaagtctaggattatgttaattgaccaaacctgagaattatcgatgttcctgaggaagaagagaaatctaaaagtttggaagacatatttgggggaataattgaggaaaatttccctggccttgctagagacctagacatccaaatacaagaagctc-aagaacacctgggaaattcatcacaaaaagatgatcacctaggcacattgtcatgaggtt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 928991 450 - 2196201 caagaaatgaggggaaaaatttccaatgaaatagatagcataaataaaaaagaaa-aaaacttcaggaaacgatggacacacttatagaaatgcaaaa-gctct--gtaaagtctcagcaatagactcaaacaagcagaagaaaggacttcagaattcaaagacaaggttctcaaattaacccaatctgacaaagacaaag-aaaaaagaattaagaaaatatgaacaaagactccgagaagtctgggattatgttaaacgaccaaacctgagaattatcggtgttcctgaggaagaagagaaatctaaaagtttggaagacatgtttgggtgaataactgagcaaagttttcctggccttgctagaaacctagacatccaaatacatgaagctc-aagaacacctgggacattcatcacaaaaagatgatcacgtagtcacattgtcatgaggtt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3322143 449 - 5030052 caagaaatgaggggaaaaatttccaatgaaatagatagcataaat-aaaaagaat-aaaacttcaggaaatgatggacacactaatagaaatgcaaaatgctct--gtaaagtctcagcaatagattcaaacaagcagaagaaaggacttcagagctcaaagacaaggttctcaaatcaacccaatccgacaaagacaaag-aaaaaagaa-taagaaaatatgaacaaagactctgagaagtctggaattatgttaaatgaccaaatctgagaattatcggtgttcctgaggaagaagagaaatctaaaagtttggaagacatatttgggggaataattgaggaaaatttccctggccttgctagagacctagacatccaaatacacaaagctc-aagaacacctgggaaattcatcacaaaaagatgatcacctaggcacattgtcatgaggtt i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e otoGar3.GL873580 11165891 0 - 11315646 C a score=361098.000000 s hg38.chr4_KI270789v1_alt 22497 51 + 205944 atctaacgttaagacaaaggaaagcatcctaagagctgtgaggcaaaacaa s panTro5.chr4 192814815 51 + 194502333 atctaacgttaagacaaaggaaagcatcctaagagctgtgaggcaaaacaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699297 51 + 195804263 atctaacgttaagacaaaggaaagcatcctaagagctgtgaggcaaaacaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736700 51 + 4876863 atctaacgttaagacaaaggaaagcatcctaagagctgtgaggcaaaacaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112620925 51 + 115148730 atctaaggttaagacaaaggaaagaatcctaagagctgtgaggcaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905895 51 + 190429646 atctaaagttaagacaaaggaaagaatcctaagagctgtgaggcaaaacaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853334 51 + 189454096 atctaaagttaagacaaaggaaagaatcctaagagctgtgaggcaaaacaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24234734 51 - 25927173 atctaaagttaagacaaaggaaagaatcctaagagctgtgaggcaaaacaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3269437 21 + 4669795 atctaaagttaagac------------------------------aaacaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226096 51 + 135778131 atctaaagttaagacaaaggaaagaatcctaagagctgtgaggcaaaacaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2656782 51 - 2847728 atctaaagttaagacaaaggaaagaatcctaagagctgtgaggcaaaacaa i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189550601 50 - 190850796 atctaaagttaagagaaagtaaagaatcctaagagctgtga-gtaaaacaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13040460 48 - 14256875 atctaaagttaggaaaaagtaaagaatcctaagagctgtga-gtaaaac-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 929441 50 - 2196201 atctaaagttaggaaaaagtaaagaaccctaagagctgtga-gtaaaacaa i cebCap1.NW_016107886v1 C 0 I 21 s aotNan1.NW_018492112v1 3322592 50 - 5030052 atctaaagttaggaaaaagtaaagaattctaagagctgtga-gtaaaacaa i aotNan1.NW_018492112v1 C 0 I 47 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11165891 0 - 11315646 C a score=18399.000000 s hg38.chr4_KI270789v1_alt 22548 33 + 205944 acaaacaaacaaaacaaaacaaaacaaaaaac----c----------- s panTro5.chr4 192814866 19 + 194502333 acaaacaaa--------------acaaaaaac----c----------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699348 29 + 195804263 acaaacaaa----acaaaacaaaacaaaaaac----c----------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736751 33 + 4876863 acaaacaaacaaaacaaaacaaaacaaaaaac----c----------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112620976 24 + 115148730 aaaaaaaacc-------------aaaaaaaaccccac----------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905946 26 + 190429646 acaaacaaac-------aacaacaacaaaaaa----c----------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853385 26 + 189454096 acaaacaaac-------aacaacaaaaaaaaa----c----------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24234785 23 - 25927173 acaaac-aac-------aaca--aaaaaaaaa----c----------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3269458 24 + 4669795 acaaac-aac-------aacaacaa-aaaaac----c----------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226147 21 + 135778131 acaaac-aac-------aacaaaaac----ac----c----------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2656833 26 - 2847728 acaaacaaac-------aacaacaacaaaaaa----c----------- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189550651 28 - 190850796 ----------------gaacaacaacaaaaac----ccacaaacaaac i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13040508 27 - 14256875 -----------------aacaacaacaaaaac----ccacaaacaaac i saiBol1.JH378165 C 0 I 2 e cebCap1.NW_016107886v1 929491 21 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e aotNan1.NW_018492112v1 3322642 47 - 5030052 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11165891 0 - 11315646 C a score=101303.000000 s hg38.chr4_KI270789v1_alt 22581 21 + 205944 gg--aacctataaaggaaaactt s panTro5.chr4 192814885 21 + 194502333 ag--aacctataaaggaaaactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699377 21 + 195804263 ag--aacctataaaggaaaactt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736784 21 + 4876863 ag--aacctataaaggaaaactt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621000 21 + 115148730 aa--aacctataaaggaaaactt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905972 23 + 190429646 agataacctctagaggaaaactt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853411 23 + 189454096 agataacctctaaaggaaaactt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24234808 23 - 25927173 agataacctctaaaggaaaactt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3269482 23 + 4669795 agataacctctaaaggaaaactt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226168 22 + 135778131 agataacctgtaaaggaaaa-tt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2656859 23 - 2847728 agataacctctaaaggaaaactt i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189550681 18 - 190850796 --gtaatct-taaaggaaaac-- i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13040537 19 - 14256875 --gtaatctgtaaaggaaaac-- i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 929512 19 - 2196201 --gtaacctataaaggaaaac-- i cebCap1.NW_016107886v1 I 21 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e aotNan1.NW_018492112v1 3322642 47 - 5030052 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11165891 0 - 11315646 C a score=4305369.000000 s hg38.chr4_KI270789v1_alt 22602 512 + 205944 accagattaacagcagatttctcagcagaaaccctacaggcgagaaaagatttgtggccctatcttcagcctccttaaacaaaacaattattagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaagat-acagtccttttcagacaaacaaatgctgagagaa----tttgccactaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacatatcaaaacagaacctgtttaaagcataaatctcacaggacctataaaacaaaaatacaatt------------aacaaaaca-----aaacgaaaaaccgaggtatacaggcgac-aataacacaacgaatggaatgatacctcaagtctcaatactagcattgaatgtaaatggcctaaatgctccacttcaaagatacagaattgcagaacggataagccttcac----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa s panTro5.chr4 192814906 512 + 194502333 accagattaacagcagatttctcagcagaaaccctacaggtgagaaaggatttgtggccctatcttcagcctccttaaacaaaacaattattagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaagat-acagtccttttcagacaaacaaatgctgagagaa----tttgccactaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacatatcaaaatagaacttgtttaaagcataaatctcacaggacctataaaacaaaaatacaatt------------aacaaaaca-----aaacgaaaaaccgaggtatacaggcgac-aataacacaacgaatggaatgatacctcaagtctcaatactagcattgaatgtaaatggcctaaatgctccacttaaaagatacagaattgcagaatggataagccttcac----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699398 512 + 195804263 accagattaacagcagatttctcagcagaaaccctacaggtgagaaaggatttgtggccctatcttcagcctccttaaacaaaacaattattagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaagat-acagtccttttcagacaaacaaatgctgagagaa----tttgccactaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacatatcaaaatagaacttgtttaaagcataaatctcacaggacctataaaacaaaaatacaatt------------aacaaaaca-----gaacgaaaaaccgaggtatacaggcgac-aataacacaatgaatggaatgatacctcaagtctcaatactagcattgaatgtaaatggcctaaatgctccacttaaaagatacagaattgcagaatggataagccttcac----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3736805 512 + 4876863 accagattaacagcagatttctcagcagaaaccctacaggcgagaaaagatttgtggccctatcttcagcctccttaaacaaaacaattattagccaagaattttgtatccagcaaatgtaagcttcataaatgaaggaaagat-acagtccttttcagacaaacaaatgctgagagaa----tttgccactaccaagccagcactccaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacatatcaaaacagaacctgtttaaagcataaatctcacaggacctataaaacaaaaatacaatt------------aacaaaaca-----aaacgaaaaaccgaggtatacaggcgac-aataacacaacgaatggaatgatacctcaagtctcaatactagcattgaatgtaaatggcctaaatgctccacttaaaagatacagaattgcagaacggataagccttcac----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621021 515 + 115148730 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttgtggccctatcttcagcctccttaaacaaaacaatcatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaagat-acagtccttttcagagaaacaaatgctgagagaa----tttgccattaccaagccagcactacaagaactgctaaaaggagctctaagtcttgaaacaaatcctggaaacacatcaaaacagaaactgttcaaagcataaatctcacaggacctataaaacaaaaatacaattaaca-------aaacaaaaca-----aaacaaaaaaccaagatatacaggtgac-aataacacaacgaatggaatgatacctcaagtctcaatactagcattgaatgtaaatggcctaaatgctccacttaaaagatacagaattgcagaatgg-taagccttcac----caaccatctgctgccttcaagagacgcacctaacacataaggactcataaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188905995 516 + 190429646 accagattaacagcagatttctcagcagaaaccctacaggttagaaagga-ttgtggccctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcagacaaacaaatgctgagagaa----tttgccgctaccacgccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacacatcaaaacagaacctctttaaagcatacatctcacaggacctatgaaacaaaaatacaactaaca-------aaacaaagca-----aaacgaaaaaccgaggtatacaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcatcgaatataaatggcctaaatgctccacttaaaagatacagaagtgcagaatggataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853434 516 + 189454096 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttgtggccctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcagacaaacaaatgctgagagaa----tttgccgctaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacacatcaaaacagaacctctttaaagcatacatctcacaggacctatgaaacaaaaatacaactaaca-------aaacaaagca-----aaacgaaaaaccgaggtatacaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcattgaatataaatggcctaaatgctccacttaaaagatacagaagtgcagaatgtataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24234831 516 - 25927173 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttgtggccctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcagacaaacaaatgctgagagaa----tttgccgctaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacacatcaaaacagaacctctttaaagcatacatctcacaggacctatgaaacaaaaatacaactaaca-------aaacaaagca-----aaacgaaaaaccgaggtatacaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcattgaatataaatggcctaaatgctccacttaaaagatacagaagtgcagaatggataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3269505 516 + 4669795 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttgtggccctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcaggcaaacaaatgctgagagaa----tttgccgctaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacacatcaaaacagaacctctttaaagcatacatctcacaggacctatgaaacaaaaatacaattaaca-------aaacaaagca-----aaacgaaaaaccgaggtatacaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcattgaatataaatggcctaaatgctccacttaaaagatacagaagtgcagaatggataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaggacTCATAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226190 514 + 135778131 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttctggcgctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcagacaaacacatgctgagagaa----tttgccgctaccaagccggcactacaagaactgctaaaaggagctctaaatcttgaaacaaaccctggaaacacatcaaaacagaacctcttcaaagcataaatctcacaggacctataaaacaaaaatacaattaaca-------aaacaaagca-----aaacgaaaaagcgaggtatgcaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcattgaatataaatggcctaaatgctccacttaaaagatacagaggtgcagaatggataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaGGACTC--AAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2656882 516 - 2847728 accagattaacagcagatttctcagcagaaaccctacaggctagaaagga-ttgtggccctatcttaagcctccttaaacaaaacaattatcagccaagaattttgtatccagcaaatctaagcttcataaatgaaggaaggat-acagtacttttcaggcaaacaaatgctgagagaa----tttgccgctaccaagccagcactacaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacacatcaaaacagaacctctttaaagcatacatctcgtaggacctatgaaacaaaaatacaattaaca-------aaacaaagca-----aaacgaaaaaccgaggtatacaggtgac-aataacacaatgaatggaatgatacctcacatctcaatactagcattgaatataaatggccgaaatgctccacttaaaagatacagaagtgcagaatggataagccttcag----caaccatctgctgccttcaagagactcacctaacacataaggactcataaa i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189550699 523 - 190850796 atcagtttaacagcacatttctcagcggaaaccctataggctagaaggga-ttggggccctatcttcagcctcctaaaacaaatcaattgtcagtcaagaattttgtatccagctaatctaagtttcgtaagtgaaggaaagataacagtctttttcagacaaacaattgctgagagaattctttcagtgctgccaagtcagcactgcaagaactgctaaaacgagctctaaatcttgaaacaaatcctggaaacacatcacaacagaatctctttaaagcacacatcacacggaaccgatgaaacaaaaatgcaatta----------aaacaaaacg-----aaacggaaaaccgaggtatacaggagacaaatagcaccatgaatggaatggtacctcacatctcaatactgacgtttcatgtaaatggcctaaatgctccactgagaagatacagaattgcagagcggataagacttcaccagtcaacgatctgctggcttcaagagactcacctaacacatgaGGACTCATCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13040556 529 - 14256875 atcagtttaacagcacatttctcagcagaaactctataggctagaaggga-ttgaggccctatcttcagcctcctaaaacaaatcaattgtcagtcaagaattttgtatccagtgaatctaagtttcgtaaatgaaggaaagat-acagtctttttcagacaagcaaatgctgagagaa----ttcaccactgccaagtcagcactgcaagaactgctaaaagtagctctaaatcttgaaacaaatcctagaagcacatcaccacagaacctctttaaagcatacatctcacaggacctatgaaacaaaaatacaattaaaaaacacacaaaaaaaacg----aaaatgaaaaaccaaggtatacaggtgacaaaaagcaccgtgaatggaatggcacctcacatctcaatactagcattgaatgtaaatggcctaaatgctctactgaaaagatacagaattgcagagtgggtaagacttcaccaatcaactatctgctgccttcaagagactcacctaacacatgaGGACTCATCAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 929531 509 - 2196201 atcagtttcacagcacatttctcagcagaaaccctacaggctaaaaggga-ttggggccctatcttcag-ctcctaaaacaaaacaatcgtcagtcaagaattttgtatccagtgaatctaagcttcataaatgaaggaaagat---agtctttttcagacaaaccaatgctgagcgaa----ttcacctctgccaagtcagcactgcaagaactgctaaaaggagctctaaatcttgaaacaaatcctggaaacgcatcacaacagaacctctttaaagcatacgtctcacaggtcctataaaacaaaaatacaatta----------aaacaaaacg-----------aaaaccgaggtatacaggtgacaaatagcgcgatgaatggaatggtacctcacatctcaatacttgcattgaatgtaaatggcctaaatgctctacttaaaagatacagaattgcagagtggataagaattcaccaatcaactatctgctgccttcaagagactcacctaacacatgaGGACTCATCAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3322689 519 - 5030052 atcagtttaacagcacatttctcagcagaaaccctataggctagaagcga-ttggggccctatcttcagcctcctaaaacaaaacaattgtcagtcaagaattttgtatccggtgaatctaagcttcgtaaatgaaggaaagat-acagtctttttcagacaagcaaatgctgagagaa----ttcaccactgccaagtcagcactgcaagaactgctaaaaggaactgtaaatcttgaaacaaatcctggaaacacatcacaagagaacctttttaaagcacacatctcacaggacctatgaaacaaaaatacaatta----------aaacaaaacaaaacaaaatgaaaaaccgaggtttacaggcgac----agtgcaatgaatggaatggtacctcacatctcaatactagcattgaatgtaaatggcctaaatgctctactgaaaagatacagaattgcagagtgggtaagacttcagcaatcaactatctgctgccttcaagagactcacctaacacatgaGGACTCATCAA i aotNan1.NW_018492112v1 I 47 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11165891 0 - 11315646 C a score=10920.000000 s hg38.chr4_KI270789v1_alt 23114 1 + 205944 a s panTro5.chr4 192815418 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699910 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737317 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621536 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906511 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853950 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235347 1 - 25927173 a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270021 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226704 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657398 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551222 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041085 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930040 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3323208 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165891 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e dasNov3.JH570353 1352441 2 - 2520184 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=127111.000000 s hg38.chr4_KI270789v1_alt 23115 12 + 205944 tctcTTGCTAAT s panTro5.chr4 192815419 12 + 194502333 tctcTTGCTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699911 12 + 195804263 tctcTTGCTAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737318 12 + 4876863 tctcTTGCTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621537 12 + 115148730 tctcTTGCTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906512 12 + 190429646 tctcCTGCTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853951 12 + 189454096 tctcCTGCTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235348 12 - 25927173 tctcCTGCTAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270022 12 + 4669795 TCTCCTGCTAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226705 12 + 135778131 TCTCTTGCTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657399 12 - 2847728 tctcCTGCTAAT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551223 12 - 190850796 TCCCTTGCTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041086 12 - 14256875 TCCCTTGCTAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930041 12 - 2196201 TCCCTTGCTAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3323209 12 - 5030052 TCCCTTGCTAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165892 12 - 11315646 TCCCTTTCTAAT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1352443 12 - 2520184 TCCCATTCCAAT i dasNov3.JH570353 I 2 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861043 287 - 59632846 I e mm10.chr8 86503263 529 - 129401213 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=1114874.000000 s hg38.chr4_KI270789v1_alt 23127 121 + 205944 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACCAGAAGGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCCGCTTGCTTCCCATC---TATTCAATAAAGTCCAAATTAC----CTA---TC---TTACGCGTGGT s panTro5.chr4 192815431 121 + 194502333 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACCAGAAGGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCCACTTGCTTCCCATC---TATTCGATAAAGTCTAAATTAC----CTA---TC---TTACGCGTGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192699923 121 + 195804263 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACCAGAAGGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCCACTTGCTTCCCATC---TATTCGATAAAGTCTAAATTAC----CTA---TC---TTACGCGTGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737330 121 + 4876863 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACCAGAAGGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCCGCTTGCTTCCCATC---TATTCGATAAAGTCTAAATTAC----CTA---TC---TTACGCGTGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621549 121 + 115148730 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACCAGAAAGCAAGAATGTTAATTTCTTCC-TTAAAAT--TGCCACTTGCTTCCCATC---TGTTCGATAAAGTCTAAATTAC----TTA---TC---TTACGCATGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906524 120 + 190429646 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCC-TTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187853963 120 + 189454096 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCC-TTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235360 120 - 25927173 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCC-TTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270034 120 + 4669795 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCC-TTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226717 121 + 135778131 TTCTCCTCTCCGTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAAT--TGCCACTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657411 120 - 2847728 TTCTCCTCTCCTTTGCTCCCCAAT------CCTATACTAGAAAGCAAGAATGTTAATCTCTTCC-TTAAAGT--TGCC-TTTGCTTCCCATC---TATTTGATAAAGTCTAAATTAC----TTA---CC---TTATGCATGGC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551235 120 - 190850796 TTCTCCTCTCCTTTGCTCCCCAGT------CCCACAGCAGAAAGCAAGAATGTCAGTCTCTACC-TTAAGAT--TGCCACTTGCTT-CCATC---CGCTTGATAAAGTCTAAATCAC----TGA---AC---TTCCACACGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041098 121 - 14256875 TTCTCCTCTCCTTTGCTTCCCAGT------CCTACAGCAGAaagtaagaatgtcagtctctacc-ttaaaat--tgccgcttgcttcccatc---tacctgataaagtctaaattac----tga---cc---ttacacatgac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930053 102 - 2196201 TTCTCCTCTCCTTTGCTCCCCAGT------CCTACAGCAGAAAGCAAGAATGTCAGTCTC----------------------GCTTCCCATC---TATTTGATAAAGTCTAACTTAC----TGA---TC---TTACACATGAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3323221 121 - 5030052 TTCTCCTCTCTTTTGCTCCCCAGT------CCTACAGCAGAAAGCAAGAATGTCAGTCTCTACC-TTAAAAT--TGCCACTTGCTTCCCATC---TATTTGACAAAGTCTAAATTAC----TGA---TC---TTACACATGAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11165904 130 - 11315646 TTGT-CTCCGCTTTGCTCTCTATTTACTTCCCTAGAGCAGAAAGCAAGAACGTTAATCTCATCC-CTAACTTGCTTCTACTTGCTTCCCTTC---TACTCAATAAAGCC--ACTTTCCGTGTCG---TC---TGACACCTGGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16861330 131 - 59632846 ttttcttccactttgcttcccagttattttcctagaacaggaagcaaaactattaatttctcgc-ttaaaat----ctgattgcttcccattatgtactcagtgaattctaaattac----ata---tcatattaaccattgt i canFam3.chr16 I 287 C 0 s dasNov3.JH570353 1352455 134 - 2520184 TTTGCCCCCACTTTGCTATCCAGTTATTGTCTTGAAGCAGAAAGCAAAAAATTTAATTTTTTTCTTTGAAAT--CTTTGTTGGCTTCCTATCAAGCACTCATTAAGGTCTAAAGTCC----TTATTGTC---TTCCATATGAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e mm10.chr8 86503263 529 - 129401213 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=795043.000000 s hg38.chr4_KI270789v1_alt 23248 84 + 205944 TTTTAGTTGtctgttgcctacctaatcctctgacctcatattcccaatgtttatatcattcacca-tgacttggaacatttcatt------------------ s panTro5.chr4 192815552 84 + 194502333 TTTTAGTTGTCTGTTGCCTACCTAATCCTCTGACCTCATATTCCCAATGTTTATATCATTCACCA-TGACTTGGAACGTTTCATT------------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700044 84 + 195804263 TTTTAGTTGtctgttgcctacctaatcctctgacctcatattcccaatgtttatatcattcacca-tgacttggaacgtttcatt------------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737451 84 + 4876863 TTTTAGTTGtctgttgcctacctaatcctctgacctcatattcccaatgtttatatcattcacca-tgacttggaacgtttcatt------------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621670 84 + 115148730 TTTTAGTTGTCTGTTGCCTACCCAATCCTCTGACCTCATATTCCCAATGTTTATATCATTCACCA-TGATTTGGGACATTTCATT------------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906644 84 + 190429646 TTTTAGTTGTCTGTTGCCTACCCAATCCTCTGACCTCATATTCCCAATGTTTATGTCATTGACCA-TGACTTGGAATGTTTCATT------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854083 84 + 189454096 TTTTAGTTGTCTGTTGCCTACCCAATCCTCTGACCTCATATTCCCAATGTTTATGTCATTGACCA-TGACTTGGAATGTTTCATT------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235480 84 - 25927173 TTTTAGTTGTGTGTTGCCTACCCAATCCTCTGACCTCATATTCCCAATGTTTATGTTATTGACCA-TGACTTGGAATGTTTCATT------------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270154 82 + 4669795 TTTTAGTTGtctgttgcctacccaatcctctgacctcatattcccaatgtt--tgtcattgacca-tgacttggaatgtttcatt------------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226838 84 + 135778131 TTTTAGTTGTCTGTTGCCTACCCAATCCTCTTACCTCATATTCCCAATGTTTATGTCATTGACCA-TGACTTGGAATGTTTCATT------------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657531 82 - 2847728 TTTTAGTTGtctgttgcctacccaatcctctgacctcatattcccaatgtt--tgtcattgacca-tgacttggaatgtttcatt------------------ i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551355 73 - 190850796 ATCCAGTTGTCCGTTGCCTGCCCCATCCTCTAACCT-ACGTGA-----G-----GTCACTCACCA-CGACTCAGAACATTTCATT------------------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041219 79 - 14256875 tctccgttgtctgttgcctacccagtcctctgacctcatGTGCCCAATG-----GTCATTCACCA-TGACTCAGAACATTTCATT------------------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930155 79 - 2196201 TCTCTGTTGTCTGTTGCCTACCCAGTCCTCTGACCTCACATGCCCAAGG-----GTCATTCACCA-TGACTCAGAGCATTTCATT------------------ i cebCap1.NW_016107886v1 C 0 I 45 s aotNan1.NW_018492112v1 3323342 79 - 5030052 TTTCAGCTGTCCGTTGCCTACCCAGTCCTCTAACCTCACGTGCCCAATG-----GTCATTCACCA-TGACTCAGAACATTTCGTT------------------ i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11166034 77 - 11315646 TTTCAGCTGTCTGCTGCCTACCTAGCCCTCCCATCTCACGTCTCCAACATTCATCTCATTCTCCA--------GAACATTCTGCT------------------ i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86503792 85 - 129401213 TTTTAATTATCTGTTGATTACTGAATCTTCTGGTTGCATGCCCCTTGTATTTGCATCACTCATTGGTGAGTTAGCATATGTGATT------------------ i mm10.chr8 I 529 I 1 s canFam3.chr16 16861461 84 - 59632846 ttataattatctgttgcctcctcagccctctggcctcat-ctcacaatatttatcttattcaccaatcactcAGAACATGCTATT------------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1352589 103 - 2520184 GTTTAATTATCTGCCATCTCTCCAGTCCTCTGGCCTCATGTCCCCATTATTTATCTCATTCACCAATGACTCAGAATATACCACACCAAAGGCAAGCAGAGTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=34689.000000 s hg38.chr4_KI270789v1_alt 23332 7 + 205944 ccttata-- s panTro5.chr4 192815636 7 + 194502333 CCTTATA-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700128 7 + 195804263 ccttata-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737535 7 + 4876863 ccttata-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621754 7 + 115148730 CCTTATA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906728 7 + 190429646 CCTTATA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854167 7 + 189454096 CCTTATA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235564 7 - 25927173 CCTTATA-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270236 7 + 4669795 ccttata-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226922 7 + 135778131 CCTTACA-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657613 7 - 2847728 ccttata-- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551428 6 - 190850796 -CCCAAA-- i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13041298 6 - 14256875 -CCCAAA-- i saiBol1.JH378165 C 0 I 1 s aotNan1.NW_018492112v1 3323421 6 - 5030052 -CCCAAA-- i aotNan1.NW_018492112v1 C 0 I 39 s otoGar3.GL873580 11166111 6 - 11315646 -CCCAAG-- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86503878 5 - 129401213 --CCACA-- i mm10.chr8 I 1 I 2 s canFam3.chr16 16861545 6 - 59632846 -CCCAAA-- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1352692 7 - 2520184 --TCACAGA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 930234 45 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=184851.000000 s hg38.chr4_KI270789v1_alt 23339 48 + 205944 ttatcccttccc---tagacctt--ccctctgattat----------------------------------------------c-tcttccatct----------------------------------------------------------------------------------------------ggacc s panTro5.chr4 192815643 48 + 194502333 TTATCCCTTCCC---TAGACCTT--CCCTCTAATTAT----------------------------------------------C-TCTTCCATCT----------------------------------------------------------------------------------------------GGACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700135 48 + 195804263 ttatcccttccc---tagacctt--ccctctaattat----------------------------------------------c-tcttccatct----------------------------------------------------------------------------------------------ggacc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737542 48 + 4876863 ttatcccttccc---tagacctt--ccctctgattat----------------------------------------------c-tcttccatct----------------------------------------------------------------------------------------------ggacc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621761 48 + 115148730 TTATTCCTTCCC---TAGACCTT--CCCTCTGATCAT----------------------------------------------C-TCTTCCATCT----------------------------------------------------------------------------------------------GGACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906735 48 + 190429646 TTATGccttcct---tagacctt--ccctctgattat----------------------------------------------c-ccttccatct----------------------------------------------------------------------------------------------ggacc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854174 48 + 189454096 TTATGccttcct---tagacctt--ccctctgattat----------------------------------------------c-ccttccatct----------------------------------------------------------------------------------------------ggacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235571 48 - 25927173 TTATGccttcct---tagacctt--ccctctgattat----------------------------------------------c-ccttccatct----------------------------------------------------------------------------------------------ggacc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270243 48 + 4669795 ttatgccttcct---tagaccct--ccctctgattat----------------------------------------------c-ccttccatct----------------------------------------------------------------------------------------------ggacc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226929 48 + 135778131 TTATCCCTTCCC---TAGACCTT--CCCTCTGATtat----------------------------------------------c-ccttccatct----------------------------------------------------------------------------------------------agacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657620 48 - 2847728 ttatgccttcct---tagacctt--ccctctgattat----------------------------------------------c-ctttccatct----------------------------------------------------------------------------------------------ggacc i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551435 38 - 190850796 ---------GCT---AATGCATT--TTCACCAATTAC----------------------------------------------C-ACTTCCATTT----------------------------------------------------------------------------------------------GGAA- i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13041305 38 - 14256875 ---------GCT---AATATATT--TTCGCTGATTAC----------------------------------------------C-CCTTCCATTT----------------------------------------------------------------------------------------------GGAC- i saiBol1.JH378165 I 1 C 0 s otoGar3.GL873580 11166118 37 - 11315646 ----------CC---AGTACATT--GTCTCAGACGAT----------------------------------------------C-CCCT-CGTCT----------------------------------------------------------------------------------------------GGGCC i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86503885 40 - 129401213 TTAGTGTAACTT---TAGA-----------AGATTGT----------------------------------------------AGTTTTCTGTCT----------------------------------------------------------------------------------------------AGACC i mm10.chr8 I 2 C 0 s canFam3.chr16 16861552 40 - 59632846 ---------GCC---AGGATATT--TTCACAGACGGT----------------------------------------------CCTTTTCCATCT----------------------------------------------------------------------------------------------AGACT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1352699 192 - 2520184 -TACCCCTTTCCATACAAACCTTACTCTTCTGAACATTTGAAAAAATAGAGTTCACGTTTAATAATTACAGGCACCGTACTTCC-CCTTCCCCCTTCCAGGGCAGCAGTGGGGGTGGTGTGGGGTCTGGGAAATTTGTCCCCAGCAGCAAGGACAGTCGTTCCAAAAGTGATTTTCAGAAAATAAAGAAGGACC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 930234 45 - 2196201 I e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e aotNan1.NW_018492112v1 3323427 39 - 5030052 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=3209897.000000 s hg38.chr4_KI270789v1_alt 23387 316 + 205944 ----------------tttcccttcctcaatgggcaatttcca----ttcat-------------tatttaagg----------------------------------------ctcagcttaatttactccgttgtggagctcttccttatcactccctagtcagtcgc-tccctccc-cagcactgtctctaggcttgtatcacagcaccacacca------cctgctgacttgtcagcctggctcatgataccttgctgcctttaatcaagtctggttcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacttgtctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTTCAACATAAGTAACTT s panTro5.chr4 192815691 316 + 194502333 ----------------TTTCCCTTCCTCAATGGACAATTTCCA----TTCAT-------------TATTTAAGG----------------------------------------CTCAGCTTAATTTACTCCCTTGTGGAGCTCTTCCTTATTACTCCCTAGTCAGTCGC-TCCCTCCC-CAGCACTGTCTCTAGGCTTGTATCACAGCACCACACCA------CCTTCTGACTTGTCAGCCTGGCTCATGATACCTTGCTGCCTTTAATCAAGTCTGGTTCTTCAATTATGATCACAGTGTTTGCTACATAGTAGAAGATAAAGAAATACTTGTCTGTTGGATGAATGCTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTTTAACATAAGTAACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700183 316 + 195804263 ----------------tttcccttcctcaatggacaatttcca----ttcat-------------tatttaagg----------------------------------------ctcagcttaatttactcccttgtggagctcttccttattactccctagtcagtcgc-tccctccc-cagcactgtctctaggcttgtatcacagcaccacacca------ccttctgacttgtcagcctggctcatgataccttgctgcctttaatcaagtctggttcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacttgtctgttggatgaatgCTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTTTAACATAAGTAACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737590 316 + 4876863 ----------------tttcccttcctcaatgggcaatttcca----ttcat-------------tatttaagg----------------------------------------ctcagcttaatttactccgttgtggagctcttccttatcactccctagtcagttgc-tccctccc-cagcactgtctctaggcttgtatcacagcaccacacca------cctgctgacttgtcagcctggctcatgataccttgctgcctttaatcaagtctggttcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacttgtctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTTTAACATAAGTAACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112621809 316 + 115148730 ----------------TTTCCTTTCTTCATTGGGCAATTTCCA----TTCAT-------------TATTTAAGG----------------------------------------CTCGGCTTAATTTACTCCCTTGTGGAGCTCTTCCTTATTACTCCCTAGTCAGTCGC-TCCCTCCC-CAGCACTGTCTCTAGGCCTGTATCACAGCACCACACCA------CCTGCTGACTTGTCAGCCTGGCTCATGATACCTTGCTGCCTTTAATCAAGTCTGGTTCTTCAATTATGATCACAGTGTTTGCTACATAGTAGAAGATAAAGAGATACTTATCTGTTGGATGAATGGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTTTAACATAAGTAACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188906783 316 + 190429646 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtggagctctgccttattactccctagtcagttgc-tccctccc-cagcactgtctctgggcctgtatcatagcaccacacca------tctgctgacttgtcggcctggctcgtgataccttgaggcctttaatcaagtcttattcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacctatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854222 316 + 189454096 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtggagctctgccttattactccctagtcagttgc-tccctccc-cagcactgtctctcggcctgtatcatagcaccacacca------tctgctgacttgtcggcctggctcgtgatatcttgaggcctttaatcaagtcttattcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacctatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235619 316 - 25927173 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtggagctctgccttattactccctagtcagttgc-tccctccc-cagcactgtctctcggcctgtatcatagcaccacacca------tctgctgacttgtcggcctggctcgtgatatcttgaggcctttaatcaagtcttattcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacctatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270291 316 + 4669795 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtagagctctgccttattactccctagtcagtcgc-tccctccc-cagcactgtttctcggcctgtatcatagcaccacacca------tctgctgacttgtcggcctggctcgtgataccttgaggcctttaatcaagtcttattcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacctatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134226977 316 + 135778131 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtggagctcttccttattactccctagtcagtcgc-tccctccc-cagcactgtctctaggcctctatcgtagcaccacacca------tctgctgacttgtcggcctgactcatgatgccttgaggcctttaatcaagtcttactcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacttatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657668 316 - 2847728 ----------------tttcccttcctcatttggcaattccca----ttcat-------------tatttaagg----------------------------------------ctcggcttaatttactcccttgtggagctctgccttattactccctagtcagtcgc-tccctccc-cagcactgtctctcggcctgtatcgtagcaccacacca------tctgctgacttgtcggcctggctcgtgataccttgaggcctttaatcaagtcttattcttcaattatgatcacagtgtttgctacatagtagaagataaagaaatacctatctgttggatgaatgGTCAAGTAGCAATGAACTTTGCCTATT-------CTTTTCTAACATAAGTAACTT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551473 312 - 190850796 ----------------TTTCCCTTCCTCGTTCGGCAATTTTCA----TTCAC-------------TATTCAAGG----------------------------------------CTCAGCCTAATTCGCTCCCTTGTGGCGCTCTCCCTTATCACTCCCTCGTCAGTCGC-TCCCTCCC-CAGCACTGTCTCCAGGCCTGTATCACAGCAGCACACCA------GCTGCTGACTCGTCAGCCTGGCTCAGGACACCTTGAGGCCTTTAATCGAGTCTGGTTCTTCAGTTAGAATCACAGTGTTTGCTGCAT---AGAAGATAAAGAAACACATATCCATTGGTTGAATGGTCAAGTAGCACTGAACTCTGCCTATT--------TTTTTTAACATAAGTAACTT i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13041343 315 - 14256875 ----------------TTTCCCTTCCTCATTTGGCAATTTTCA----TTCAT-------------TATTTAAGG----------------------------------------CTCAGCCTGATTTACTCCCTTGTGGAGCTCTTCCTTATCGCTCCCT-GTCAGTTGC-TCCCTCCC-CAGCACTGACTCTAGGCCTGGATCACAGCACCACACCG------GCTGCTGACTTGTCAGCCTGGCTCATGACACCTTGAGGCCTTTCATCGAGTCTGGTTCTTCAATTAGGATCACAGTGTTTGCTGCATAGAAGAAGATAAAGAAATACGTGTCTGTTGGTTTAATGGTCAAGTAGCAATGAACTCTGCCTATT-------CTTTTTTAACATAAGTAACTT i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 930279 315 - 2196201 ----------------TTTCCCTTCCTCATTTGGCAATTTTCA----TTCAT-------------TATTTAAGT----------------------------------------CTCAACCTGATTTGCTCCCTTGTGGAGCTCTTCCTTATCACTCCCT-GTCAGTTGC-TCCCTCCC-CAGCCCTGACTCTAGGCCTGTATCACAGCCCCACACCA------GCTGCTGACTTGTCAGCCTGGCTCACGGTGACTTGAGGCCTTTAATCGAGCCTGGCTCTTCAGTTAGGATCACAGTGTTTGCTGCATAGAAGAAGATAAAGAAATACGTATCTGTTGGTTGAATGGTCAAGTAGCAATGAACTCCGCCTATT-------CTTTTTTAACGTAAGTAACTT i cebCap1.NW_016107886v1 I 45 C 0 s aotNan1.NW_018492112v1 3323466 314 - 5030052 ----------------TTTCCCTTCCTCATTCGGCAATTTTCA----TTCAT-------------TATTCAAGG----------------------------------------CTCAGCCTAATTTATTCCC-TGTGGAGCTCTTCCTTATCACTCCCT-GTCAGTTGC-TCCCTCCC-CAGCACTGTCTCTAGGCCTGTATCACAGCACCACGCCG------GCTGCTGACTTGTCAGCCTGGCTCATGATACCTTGAGGCCTTTGATAGGGTCTAGTTCTTCAATTAGAATCGCAGTGTTTACTGCGTAGAAGAAGATAAAGAAATATGTATCTGTTGGTTGAATGGTCAAGTAGCAATGAACTCTGCCTATT-------CTTTTTTAACATAAGTAACTT i aotNan1.NW_018492112v1 I 39 I 2 s otoGar3.GL873580 11166155 279 - 11315646 ----------------TTTCCCTTCCTCCTCCAGCAATGTCTA----TTCAC-------------TATTTAGGG----------------------------------------ATCAGCTTAACTGACTCCCT------GTTTGTCGTCA----TCCCAGGTCAGGCTG-TCCCTCCC-CA-----GACTCCAGACTGG-------------CGTCA------TTTGCCAGCATG-CGGCCCAG--TGTGTCTCATTTGGGGCTTTAGTCAAGTCTGGGTCTCCGATTATGTTCACAGAGTTTGCTACAC------AGATAAAGGAATACCTATCTGTTGGTTAATCAGCCAAGGAGCAAGGAACTTTGCCCGTT-------CTCTTTTTACATAAACAATTT i otoGar3.GL873580 C 0 I 11 s mm10.chr8 86503925 269 - 129401213 ----------------TTTCCTTTTCTCATGTGAAAAATTGTA----TCCAC-------------CATTT----------------------------------------------------------------TGTTTAGC----CCTTGGCATTCCCTAGTC--TTACATACTTGTT-GAATATTG--TATGAATTTATTTTACTGAGCTGTAACATTTTCTTTTTCTGACTG--CAATCTGTCTCATGGTAGTTTGAAATATCTAATTAAGTATGGATCTCTAAGTATGTTCACGATGTTTGCTACATAGCAGAGAATAAAGAATTACCTGTTTGTTG-----ATTACTAGATAAGAAAGAACATTGCCAATT-------TTCTTT--------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16861592 324 - 59632846 ----------------TTTCCCTTCCTTCTCTAGCAATTTCTA----TTCAT-------------CAGTTAAGA----------------------------------------CTCAGCTTAATTTCCTCTCTTGTGGAGCCTGTTTTTATTATTCCCTAGCCAGTCAC-TCACTCCCTTGGCATCGTCTTTGGACCTATATTACCGCACTGCAACA------TCTGCTGACTTGTCATTCTGTCCCAGGATACCTTGTGGTATTTAATCAAGTATCTGTATCCAATTATGTTCATAGTTTTTGCAACACAGCAAAAGATAAAGAAATATTTATTTGTTGGCTGATTGGCCAAGTAGGAAAGAACTTTGCCATTTTCTTCATTTTTTTAAACATAGATAATTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1352891 347 - 2520184 TTGGGGCAAGTGGTAGTGTCCCTCCCAAAACACCCAAATTTCAAGACTTCATGTATAATAAAATACATGTAAAGTCGTAGAGGGAGGAGTGGGCAGCACCTCCCCATCATGCTACCCATCCTTTGGGTCTCCGCTACGAAGCCCTTCCTTCACATTGTCTGTTCAGCCGC-TCCCA----GGGCACTGACTC-AGGCCCGTCCGACAGCACCACCAAG------CCTGCTTGCGCGACAGCCCGACTCATGCCACTTTG-GGTGTTTAGTCAAATGTGGA-CCCCAGTTATGCTCACAGTGTTGG-TGCATAGCAGA-------------------TGTTGGTTGATCGATCATGCCTCAAAGAACTTCGCCAATT-------CTCTT---------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=-25196.000000 s hg38.chr4_KI270789v1_alt 23703 2 + 205944 A-C s panTro5.chr4 192816007 3 + 194502333 AAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700499 3 + 195804263 AAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737906 2 + 4876863 A-C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622125 3 + 115148730 TAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907099 3 + 190429646 TAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854538 3 + 189454096 TAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235935 3 - 25927173 TAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270607 3 + 4669795 TAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227293 3 + 135778131 TAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657984 3 - 2847728 TAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551787 1 - 190850796 -A- i calJac3.chr3 I 2 C 0 s aotNan1.NW_018492112v1 3323782 1 - 5030052 -A- i aotNan1.NW_018492112v1 I 2 C 0 s otoGar3.GL873580 11166445 1 - 11315646 t-- i otoGar3.GL873580 I 11 C 0 s dasNov3.JH570353 1353238 1 - 2520184 --C i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 930594 0 - 2196201 C e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861916 0 - 59632846 C e mm10.chr8 86504194 0 - 129401213 C e saiBol1.JH378165 13041658 3 - 14256875 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=101297.000000 s hg38.chr4_KI270789v1_alt 23705 16 + 205944 AATA-CTTCTTTTACTC s panTro5.chr4 192816010 16 + 194502333 AATA-CTTCTTTTACTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700502 16 + 195804263 AATA-CTTCTTTTACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737908 16 + 4876863 AATA-CTTCTTTTACTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622128 17 + 115148730 AATACCTTCTTTTACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907102 17 + 190429646 AATACCTTCTTTTACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854541 17 + 189454096 AATACCTTCTTTTACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235938 17 - 25927173 AATACCTTCTTTTACTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270610 17 + 4669795 AATACCTTCTTTTACTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227296 17 + 135778131 AATACCTTTTTCTACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2657987 17 - 2847728 AATACCTTCTTTTACTC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551788 16 - 190850796 AGTG-CCTTTTTTACTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041661 16 - 14256875 AATA-CCTTTCTTACTC i saiBol1.JH378165 I 3 C 0 s aotNan1.NW_018492112v1 3323783 16 - 5030052 AATA-CCTTTTTTACTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11166446 16 - 11315646 aatt-ttttttctattt i otoGar3.GL873580 C 0 I 106 s mm10.chr8 86504194 13 - 129401213 ATCA-CTTTTTACA--- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1353239 14 - 2520184 AATA-GTTTTTATAT-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 930594 0 - 2196201 C e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861916 0 - 59632846 C e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=98047.000000 s hg38.chr4_KI270789v1_alt 23721 14 + 205944 TCATTGAAGGTATT s panTro5.chr4 192816026 14 + 194502333 TCATTGAAGGTATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700518 14 + 195804263 TCATTGAAGGTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737924 14 + 4876863 TCATTGAAGGTATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622145 14 + 115148730 TCATTGAAGGTATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907119 14 + 190429646 TCATTGAAGGTGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854558 14 + 189454096 TCATTGAAGGTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235955 14 - 25927173 TCATTGAAGGTGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270627 14 + 4669795 TCATCGAAGGTATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227313 14 + 135778131 TCATTGAGGGTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658004 14 - 2847728 TCATTGAAGGTATT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551804 14 - 190850796 TCACTGAAGGTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041677 14 - 14256875 TCACTGAAGGTATT i saiBol1.JH378165 C 0 T 33 s aotNan1.NW_018492112v1 3323799 14 - 5030052 TTATTGAAGTTATT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86504207 10 - 129401213 ---TGAACGATGT- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1353253 8 - 2520184 ------AAATAATT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 930594 0 - 2196201 C e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16861916 0 - 59632846 C e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166462 106 - 11315646 I a score=211444.000000 s hg38.chr4_KI270789v1_alt 23735 33 + 205944 -TAAAATACCTTCACCACAATTTTACTCTCATTG s panTro5.chr4 192816040 8 + 194502333 -TAAAATAC------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700532 33 + 195804263 -TAAAATACCTTCACCACAATTTTACTCTCATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737938 33 + 4876863 -TAAAATACCTTCACCACAATTTTACTCTCATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622159 33 + 115148730 -TAAAATACCTTCACCACAATTTTACTCTCATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907133 33 + 190429646 -TAAAATACCTTCACCACAATTTTACTCTCATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854572 33 + 189454096 -TAAAATACCTTCACCACAATTTTACTCTCATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24235969 33 - 25927173 -TAAAATACCTTCACCACAATTTTACTCTCATTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270641 33 + 4669795 -TAAAATATCTTCACCACAATTTTACTCTCACTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227327 33 + 135778131 -TAAAATACCTTCACCACAATTTTACTCTCATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658018 33 - 2847728 -TAAAATACCTTCACCACAATTTTACTCTCATTG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551818 33 - 190850796 -TAAAATACCTTTACCACATTTTTACTCTCATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041658 25 - 14256875 -TAAAATACCT--------TTCTTACTCTCACTG i saiBol1.JH378165 T 33 C 0 s cebCap1.NW_016107886v1 930594 25 - 2196201 -TAAAATACCT--------TTTTTATTCTCACTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3323813 33 - 5030052 -TAAAATACCTTTACCACAATTTTACTCTCATGG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86504217 23 - 129401213 -TAAAATCCCC---------TTTCACCCTCACT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16861916 11 - 59632846 -TGAAATCCCTT---------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1353261 18 - 2520184 TGAAAATCCTTT-------------CTCTCA--- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166462 106 - 11315646 I a score=1420883.000000 s hg38.chr4_KI270789v1_alt 23768 164 + 205944 AATGTATTTTAAAATACTT----------TCAGTTCCTCACCCTTCAACATCCATCTCAG-CCC--TCAGTTCTACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGATATATTGTAAATACTGAAAAT-AAAAAATAATAACTATTTAAA----A----TGAAGA----TCATTCAGGAAAACTTA s panTro5.chr4 192816048 144 + 194502333 -----------------TT----------TCAATTCCTCACCCTTCAACATCCATCTCAG-CCC--TCAGTTCTACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGATATATTGTAAATACTGAAAAT-AAAAAATAA---CTATTTAAA----A----TGAAGA----TCATTCAGGAAAACTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700565 161 + 195804263 AAGGTATTTTAAAATACTT----------TCAATTCCTCACCCTTCAACATCCATCTCAG-CCC--TCAGTTCTACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGATATATTGTAAATACTGAAAAT-AAAAAATAA---CTATTTAAA----A----TGAAGA----TCATTCAGGAAAACTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3737971 164 + 4876863 AAGGTATTTTAAAATACTT----------TCAATTCCTCACCCTTCAACATCCATCTCAG-CCC--TCAGTTCTACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGATATATTGTAAATACTGAAAAT-AAAAAATAATAACCATTTAAA----A----TGAAGA----TCATTCAGGAAAACTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622192 164 + 115148730 AAAGTATTTTAAAATACTT----------TCAATTCCTCACCCTTCAACATCCATCTCAG-CCC--TCAGTTCCACTGCAGATGCAATTATTTT---------TAAGGCAACTT--------TT---------------------TAAATATATTGTAAATACTGAAAAT-AAAAAATAATAACTATTTAAA----A----TGAAGA----TCATTCAGGAAAACTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907166 156 + 190429646 AAAGTATTTTAAAATGCTT----------TCAATTCCTCAGCCTTCAACATCCATCTCAGCCCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGCTATATTGTAAATACTGAAAAT-TAAAAAAA---------TAAA----A----TGAAGA----TCATTCAGGAAAATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854605 160 + 189454096 AAAGTATTTTAAAATGCTT----------TCAATTCCTCAGCCTTCAACATCCATCTCAG-CCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGCTATATTGTAAATACTGAAAAT-TAAAAAAA----CTATTTAAA----A----TGAAGA----TCATTCAGGAAAATTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236002 160 - 25927173 AAAGTATTTTAAAATGCTT----------TCAATTCCTCAGCCTTCAACATCCATCTCAG-CCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGCTATATTGTAAATACTGAAAAT-TAAAAAAA----CTATTTAAA----A----TGAAGA----TCATTCAGGAAAATTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270674 160 + 4669795 AAAGTATTTTAAAATACTT----------TCAATTCCTCAGCCTTCAACATCCATCTCAG-CCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGCTATATTGTAAATACTGAAAAT-TAAAAAAA----CTATTTAAA----A----TGAAGA----TCATTCAGGAAAATTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227360 161 + 135778131 AAAGTATTTTAAAATACTT----------TCAATTCCTCAGCCTTCAACATCCATCTCAG-CCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGATATATTGTAAATACTGAAAAT-AAAAAAAAG---CTATTTAAA----A----TGAAGA----TCATTCAGGAAAATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658051 159 - 2847728 AAAGTATTTTAAAATACTT----------TCAATTCCTCAGCTTTCAACATCCATCTCAG-CCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACTT--------TT---------------------TAGCTATATTGTAAATACTGAAAAT-TAAAAAA-----CTATTTAAA----A----TGAAGA----TCATTCAGGAAAATTTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189551851 164 - 190850796 AAGGTATTTTAAAATCTCT----------TCAATTCCCCACTCTTCAGCATCCATCTCAG-GCC--CCAGTTCCACTGCAGATGCCACTATTTT---------TAAGGCAACAT--------TT---------------------CAGATATATTTTAAATACTGAAAAT-AAAAAATACTAACTATTTGAA----A----TGAAGG----TAATTCAGGAAAATTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041683 163 - 14256875 AAGGTA-TTTAAAATACCT----------TCAATTCCCCACTCTTCAGCATCCATCTCAG-GCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACAT--------TT---------------------TAGATATATTTTAAATACTGAAAAT-AAAAAATATCAACTATTTGAA----A----TGAAGG----TAATTCAGGAAAATTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930619 164 - 2196201 AAGGTA-CTTAAAATGCCT----------TCAATTCCCCAGCCTTCAGCATCCATCTCAG-GCC--CCAGTTCCACTGCAGATGCAACTATTTT---------TAAGGCAACAT--------TT---------------------TAGATATATTTTAAATACTGAAAATAAAAAAATACCAACTATTTGAA----A----TGAAGG----TAATTCAGGAAAATTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3323846 160 - 5030052 AAGGTATTTTAAAATACCT----------TCAATTCCCCACCCTTCAGCATCCATGTCAG-GCC--CCAGTTCCACTGAAGATGCAATTATTTT---------TAAGGCAACAT--------TT---------------------TAGATATATTTTAAATACTGAAAAT-AAAAAAT----ACTATTTGAA----A----TGAAGG----TAATTCAGGAAAATTTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11166568 201 - 11315646 AAGCAATTTTAAAATCCTTTCTCTCACCCTCAATGCCCTACCTTCCAGCACCCATCTCAG-CCCCTCCAGCTCCACTGCAGATGCAATTCTCTC---------TAAGACAACCG--------TTTCGTAAGGTAATAATCATGCATAGATCTACTTTAAACACTGCAAAT-AAAAATGAACAGCTGTTTGAA----A----TGAATGAAACTAATTCAGGAGAATGTA i otoGar3.GL873580 I 106 I 1491 s mm10.chr8 86504240 132 - 129401213 ----------------------------------TCCCTACATTCCAATACCTAGC-----TTT--CTAGATACTCTGCA---------ATTTC---------AAAACCAGCTT--------CTGC-------------------TAAGATTCTAGTTAACA-TGGAAAT-AACAATTAAAAATTATTTGAAGCAGA----TGAAAA----GAGTGTAGATACATTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16861927 123 - 59632846 -------------------------------------------------ATTTCATTCAG-TAC--CCAGCTACCCCACAGATGCAACTGTTCCTCTTTTTCATGAGGTTACATAGGGCATATG---------------------CACATACATTTTAAACACTGAAAAT-AAAGATGAAAAACTATTTGAA----A----TAAA----------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1353279 174 - 2520184 ----------------CCC----------CCAATACCCCAACTTCCAACCCCCTTCTCAGCTCC--Ccacctacccctcagatgcaaccttttc---------tgaggcaactc--------tttcacaaggtcacagtcatatgtagatgtagtttgaacactgaatgt-gaagattaatctctatttgaa----aGATGTATAAA----TAGTTCTGTAGAATTTA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=379903.000000 s hg38.chr4_KI270789v1_alt 23932 39 + 205944 CTATTTCATCTGCGTTTAGTTCAATATGCCAATTTCATG s panTro5.chr4 192816192 39 + 194502333 CTATTTCATCTGCGTTTAGTTCAATATGCCAATTTCATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700726 39 + 195804263 CTATTTCATCTGCGTTTAGTTCAATATGCCAATTTCATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738135 39 + 4876863 CTATTTCATCTGTGTTTAGTTCAATATGCCAATTTCATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622356 39 + 115148730 CTATTTCATTTGTATGTAGTTCAATATGCCAATTTCATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907322 39 + 190429646 CTATTTCATTTGCATTTAGTTCAATATGCCAATCTCATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854765 39 + 189454096 CTATTTCATTTGCATTTAGTTCAATATGCCAATCTCATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236162 39 - 25927173 CTATTTCATTTGCATTTAGTTCAATATGCCAATCTCATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270834 39 + 4669795 CTATTTCATTTGCATTTAGTTCAATATGCCAATCTCATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227521 39 + 135778131 CTATTTCATTTGCATTTAGTTCAATATGCCAGTCTCATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658210 39 - 2847728 CTATTTCATTTGCATTTAGTTCAATATGCCAATCTCATG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552015 39 - 190850796 CTATTTCATTGGCATTTAGTTCGATATGCCAATTTCATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041846 39 - 14256875 CTATTTCATTGGCATTTAGTTCAATATGCCAATTTCATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930783 39 - 2196201 CTATTTCATTGGCATTTAGTTCAATATGCCAATATCATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324006 39 - 5030052 CTATTTCATTGGCATTTAGTTCAATATGCCAATTTCATG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86504372 36 - 129401213 ---TTTCATTTGGTATTAATTTAATGTTTATCTATTATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16862050 28 - 59632846 ----TTCTCCTGAATTTGG--CATTAGTCCAATT----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1353453 36 - 2520184 ---TTTTATTTGACATTAGTTCAATATGTCACTTTTATG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3879107 3530 + 3993831 I e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166769 1491 - 11315646 I a score=249678.000000 s hg38.chr4_KI270789v1_alt 23971 28 + 205944 TGCTGTATTTATAAAATTATTCTTTAAT s panTro5.chr4 192816231 28 + 194502333 TGCTGTATTTATAAAATTATTCTTTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700765 28 + 195804263 TGCTGTATTTATAAAATTATTCTTTAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738174 28 + 4876863 TGCTGTATTTATAAAATTATTCTTTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622395 28 + 115148730 TGCTGTATTTATAAAATTATTCTTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907361 25 + 190429646 TGCTGTATTTATAAA---ATTCTTTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854804 25 + 189454096 TGCTGTATTTATAAA---ATTCTTTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236201 25 - 25927173 TGCTGTATTTATAAA---ATTCTTTAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270873 25 + 4669795 TGCTGTATTTATAAA---ATTCTTTAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227560 28 + 135778131 TGCTGTATTTATAAAATTATTCTTTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658249 25 - 2847728 TGCTGTATTTATAAA---ATTCTTTAAT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552054 28 - 190850796 TGCTGTATTTATAAAATCATTATTTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041885 28 - 14256875 TGCCGTATTTATAAAGTCATTATTTAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930822 28 - 2196201 TGCCATATTTATAAAATCATTATTTAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324045 28 - 5030052 TGCCGCATTTATAAAATTCTTATGTAAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3882637 28 + 3993831 TGCTGTGTTTATGAAATGTTTCTTTAAT i proCoq1.NW_012145301v1 I 3530 C 0 s mm10.chr8 86504408 24 - 129401213 TCCTTTA-TTATACA---GCACATAAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16862078 15 - 59632846 -------------AGTTTTCTCTTTAAT i canFam3.chr16 C 0 I 215 s dasNov3.JH570353 1353489 28 - 2520184 TGCTATGTTTGTGAAATGATTCTTTAAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17459965 1240 - 93316391 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166769 1491 - 11315646 I a score=594366.000000 s hg38.chr4_KI270789v1_alt 23999 62 + 205944 AAGCATCACTAA--TATATCTATGAGAAGCCAT-TA----ATTACTGCCTCTACAAAAGGCTAGTGTC-A s panTro5.chr4 192816259 62 + 194502333 AAGCATCACTAA--TATATCTATGAGAAGCCAT-TA----ATTACTGCCTCTACAAAAGGCTAGTGTC-A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700793 62 + 195804263 AAGCATCACTAA--TATATCTATGAGAAGCCAT-TA----ATTACTGCCTCTACAAAAGGCTAGTGTC-A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738202 62 + 4876863 AAGCATCACTAA--TATATCTATGAGAAGCCAT-TA----ATTACTGCCTCTACAAAAGGCTAGTGTC-A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622423 62 + 115148730 AAGCATCACTAA--TATATTTATGAGAAGCCAT-TA----ATTACTGCCTCTATAAAAGGCTAGTGTC-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907386 62 + 190429646 AAGCATCACTAA--TATATTTATGAGATGCCAT-TA----ATTACTGCCTCTATAAAAGGCTAGTGTC-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854829 62 + 189454096 AAGCATCACTAA--TATATTTATGAGATGCCAT-TA----ATTACTGCCTCTATAAAAAGCTAGTGTC-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236226 62 - 25927173 AAGCATCACTAA--TATATTTATGAGATGCCAT-TA----ATTACTGCCTCTATAAAAGGCTAGTGTC-A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270898 62 + 4669795 AAGCATCACTAA--TATATTTATGAGATGCCAT-TA----ATTACTGCCTCTATAAAAGGCTAGTGTC-A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227588 58 + 135778131 AAGCATCACTAA--TATATTTATGAGATGCC---------ATTACTGCCTCTATAAAAGGCTAGTGTC-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658274 62 - 2847728 AAGCATCACTAA--TATATTTATGAGATGCCAT-TA----ATTACTGCCTCTATAAAAGGCTAGTGTC-A i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552082 63 - 190850796 AAGCATCACTAA--TATATTTATGATAAGCCAT-TA----ATTATTGCTGCTATAAAGAGCTAGTGTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041913 63 - 14256875 AAGCATCACTAA--TATATTCATGATAAGCCAT-TA----ATTCTTGCTGCTATAAAAGTCTGGTGTCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930850 63 - 2196201 AAGCATCACTGA--TATATTTATGATAAGCTAT-TA----ATTATTGCTGCTGTAAAATGCTAGTGTCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324073 63 - 5030052 AAACATCAGTAA--TATATTTATGATAAGTCAT-TA----ATTATTTCTGCTATAAAAGGCTAGTGTCTA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3882665 66 + 3993831 AAGTATCACTAA--TATATTTATGGGAACCCAT-CAATTCATTATTGCCTCTATAAAAGAGGAATGTC-A i proCoq1.NW_012145301v1 C 0 I 6 s mm10.chr8 86504432 60 - 129401213 AAGAATCTCTAA--TATGTTT-TAGGAAACCAT-TA----ATTATTA-TTATATATGTACACAGTAGC-A i mm10.chr8 C 0 I 9 s dasNov3.JH570353 1353517 66 - 2520184 AAATATCACTCACTTATATTTATGGGAAGCCACATA----ATTATTGCTTCTATAAAATAGTGCTTTCTA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17459965 1240 - 93316391 I e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166769 1491 - 11315646 I a score=195434.000000 s hg38.chr4_KI270789v1_alt 24061 16 + 205944 AAGGTAATGTTATCTC s panTro5.chr4 192816321 16 + 194502333 AAGGTAATGTTATCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700855 16 + 195804263 AAGGTAATGTTATCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738264 16 + 4876863 AAGGTAATGTTATCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112622485 16 + 115148730 AAGGTAATGTTATCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907448 16 + 190429646 AAGGTAATGTTACCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854891 16 + 189454096 AAGGTAATGTTACCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236288 16 - 25927173 AAGGTAATGTTACCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270960 16 + 4669795 AAGGTAATGTTACCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227646 16 + 135778131 AAGGTAATGTTATCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658336 16 - 2847728 AAGGTAATGTTACCTC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552145 16 - 190850796 AAGGTAAGGTTAGCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041976 16 - 14256875 AAGGTAAAGTTATCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930913 16 - 2196201 AAGGTCATGTTATCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324136 16 - 5030052 AAGGTAATGTTATCTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461205 16 - 93316391 AAGGTAAGGTAATCTC i micMur3.chr14 I 1240 C 0 s proCoq1.NW_012145301v1 3882737 16 + 3993831 AAGGTAATGTAATCTC i proCoq1.NW_012145301v1 I 6 C 0 s mm10.chr8 86504501 16 - 129401213 AAGCTATTGTGACTTC i mm10.chr8 I 9 C 0 s dasNov3.JH570353 1353583 16 - 2520184 AAAATAAGATAATTTC i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e otoGar3.GL873580 11166769 1491 - 11315646 I a score=1724366.000000 s hg38.chr4_KI270789v1_alt 24077 142 + 205944 AAAATCTGAGATGTTTAAGTTCCAAACTTTGTCAA-TTTTTTTTCTGTAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTACTGAGTAACATTTAACATGGATTtaaagctggagccaataaatttatt-atggt s panTro5.chr4 192816337 142 + 194502333 AAAATCTGAGATGTTTAAGTTCCAAACTTTGTCAA-TTTTTTTTCTGTAATCAAGAACCCACATGTTGGATGTTTTACTGTAAAATATTACTGAGTAACATTTAACATGGATTTAAAGCTGGAGCCAATAAATTTATT-ATGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192700871 142 + 195804263 AAAATCTGAGATGTTTAAGTTCCAAACTTTGTCAA-TTTTTTTTCTGTAATCAAGAACCCACATGTTGGATGTTTTACTGTAAAATATTACTGAGTAACATTTAACATGGATTTAAAGCTGGAGCCAATAAATTTATT-ATGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738280 142 + 4876863 AAAATCTGAGATGTTTAAGTTCCAAACTTTGTCAA-TTTTTTTTCTGTAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTACTGAGTAACATTTAACATGGATTTAAAGCTGGAGCCAATAAATttatt-atggt i gorGor5.CYUI01015356v1 C 0 I 25 s nomLeu3.chr7b 112622501 143 + 115148730 AAAATCTGAGATGTTTAAGTTCCAAACTTTGTCAA-TTTTTTTTCTGTAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTACTGAGTAACATTTAACATGGATTTAAAGCTGAAGACCATAAATTTATTAATGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907464 142 + 190429646 AAAATCTGAGATGTTTAAGTTCTAAACTTTTTCAA-TTTTTTTCCGATAATCAAGAATCTACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGACACCATACATTTATT-ATGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187854907 142 + 189454096 AAAATCTGAGATGTTTAAGTTCTAAACTTTTTCAA-TTTTTTTCCGATAATCAAGAATCTACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGACACCATACATTTATT-ATGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236304 142 - 25927173 AAAATCTGAGATGTTTAAGTTCTAAACTTTTTCAA-TTTTTTTCCGATAATCAAGAATCTACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGACACCATACATTTATT-ATGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3270976 143 + 4669795 AAAATCTGAGATGTTTAAGTTCTAAACTTTTTCAATTTTTTTTCCGATAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGACACCATACATTTATT-ATGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227662 142 + 135778131 AAAATCGGAGATGTTTAAGTTCTAAACTTTTTCAA-TTTTTTTTCGATAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCCGGACACCATACATTTATT-ATGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658352 142 - 2847728 AAAATCTGAGATGTTTAAGTTCTAAACATTTTCAA-TTTTTTTCCGATAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGACACCATACATTTCTT-ATGGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552161 140 - 190850796 AAAATCTGAGATGTTTAAGTTCTAAACTTTGTCAA-TGTTTTT-CTGTAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGAAGACCAT-AATTTATT-ATGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13041992 141 - 14256875 AAAATCTGAGATGTTTAAGTTCTAAACTTTGTCAA-TTTTTTT-CTGTAATCAAGAATCCACATGTTGGATGTTTTACTGTAAAATATTGCTGCATAACATTTAACATGGATTTAAAGCTGAAGACCATAAATTTATT-ATGGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 930929 141 - 2196201 AAAACCTGAGATGTTTAAGTTCTAAACTTTGTCAA-TTTTTTT-CTGTAATCAAGAATCCACATGTTGGATGTTTTACTATAAAATATTGCTGTGTAACATTTAACATGGATTTAAAGCTGCAGACCATAAATTTACT-ATGGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324152 141 - 5030052 AAAATCTGAGATGTTTAAGTTCTAAACTTTGTTAA-TTTTTTT-CTGTAATCAAGAATCCACATGTTGGATGTTTTACTCTAAAATATTGCTGAGTAACATTTAACATGGATTTAAAGCTGGAGATCATAAATTTATT-ATGGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461221 133 - 93316391 AAAATCTGAGATGTTTAAACTCTAAAC---------TTTCTTT-CCATAATTAAGAATCCACATGTTTGCAGTTTTATTATAAAATATCTCTGAGTAGCATTTAACATAGATTTAAAGCTAGAGATCATAAATTTACT-ACAAT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3882753 141 + 3993831 AAAATCCGAGATGTTTAAACTCTAAACTTTGTTAG-TTTCTTT-CCATAATTGAGAATCCACATGCTTGCTGTCTTATTATAAAATATCGCTGAGTAAAATTTAACATAGATTTGAAACTAGAGATCATAAATTTACT-ACAGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168260 139 - 11315646 AAAACCTGGCATTTTTAAATTCCATACTCTGTTAG-TGTTTTT-CCATAATTAAGAATCTACTT--TTACCATTTTATTACAAAATATTGCTGAGTAACATTTAATGTAGATTTAAATCTGGAGACAATAAATTTACT-GCAGT i otoGar3.GL873580 I 1491 C 0 s mm10.chr8 86504517 119 - 129401213 -AAATC--AGACTTTAGAATTTTAAACTTC----A-TTGCTTT-CTATACTGAAGAGTTTATCAGTTTGATACTTCACTATAAGATATTATT-------ATTTGACGTACACTCATAGAC--------TAACTTTTTT-GCTAA i mm10.chr8 C 0 I 1 s dasNov3.JH570353 1353599 128 - 2520184 AAAATCAGAGTTTTAAAAGTTCTAAACTTTGTTCA-TCCTTT--CTATAACT---AATTCACATGTTTGGTGTTTTGCTGTAAAATAGTGCTGAGCAACACTTGGCATAGATTAAAAG---------ATAAATTTATC-ATGGT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C a score=643953.000000 s hg38.chr4_KI270789v1_alt 24219 57 + 205944 gtaaattagcttctttatagaattttctccaaagttgttcg--ataacatgagagttgg s panTro5.chr4 192816479 57 + 194502333 GTAAATTAGCTTCTTTATAGAATTTTCTCCAAAGTTGTTTG--ATAACATGGGAGTTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701013 57 + 195804263 GTAAATTAGCTTCGTTATAGAATTTTCTCCAAAGTTGTTTG--ATAACATGGGAGTTGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112622644 57 + 115148730 GTAAATTAGTTTCTTTATAGAATTTTCTCCAAAGTTGTTCG--ATAACATGGAAGTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907606 57 + 190429646 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCA--ATAACATGGGAGTTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855049 57 + 189454096 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCG--ATAACATGGGAGTTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236446 57 - 25927173 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCG--ATAACATGGGAGTTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271119 57 + 4669795 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCG--ATAACATGGGAGTTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227804 57 + 135778131 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCA--ATAACATGGGAGTTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658494 57 - 2847728 GTAAATTAGCTTCTTTATAGGATTTTGTCCAAAGTTGTTCG--ATAACATGGGAGTTGG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552301 57 - 190850796 GTGAATTAGCTTCTTTATAGAATTGTCTCCAACATTGTTCG--GTAATGTGGAAGTTGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042133 57 - 14256875 GTGAATTAGCTTCTTTATAGAATTGTCTCCAAAATTGTTTG--GTAACATGGAAGTTGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931070 57 - 2196201 GTGAATTAGCTTCTTTATAGAATTGTCTCCAAAATTGTTCG--GTAACATGGAAGTTGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324293 57 - 5030052 GTGAATTAGCTTCTTTATAGAATTGTCTCCAAAATTGTTCG--GTAACATGGAAGTTGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461354 59 - 93316391 GTAAAGTGGTGTTCTTATAGAATTTTCTCCAAAACTGTTTAATATAACATGGGAGTTGA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3882894 57 + 3993831 GTAAAATGGTGTTCTTATAGAATTTTCTCCAAAACTGTTTA--ATAACATGGGAGTTGA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168399 57 - 11315646 GTAAATTGGTGTTCTTATAGAATTGTCTCCAAAACTGTTTA--ATAACAGGGGAGTTGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86504637 49 - 129401213 TTATAGTGGC--------AGAATTTCCTCAAAAACTATTCA--GTAATATAGGAGTTGA i mm10.chr8 I 1 I 27 s dasNov3.JH570353 1353727 57 - 2520184 ATAAATTGGTGTCCTTATAAAAAGTTCTCCAAGGCTGTTCA--GTGGCACAAGCTTTGG i dasNov3.JH570353 C 0 I 1007 e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=195001.000000 s hg38.chr4_KI270789v1_alt 24276 21 + 205944 aATGAATG-------GAATGTACTCAAT s panTro5.chr4 192816536 21 + 194502333 AATGAATG-------GAATGTACTCAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701070 21 + 195804263 AATGAATG-------GAATGTACTCAAT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112622701 21 + 115148730 AATGAATG-------GGATGTACTCAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907663 21 + 190429646 AATGAATG-------GGATGTACTCAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855106 21 + 189454096 AATGAATG-------GGATGTACTCAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236503 21 - 25927173 AATGAATG-------GGATGTACTCAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271176 21 + 4669795 AATGAATG-------GGATGTACTCAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227861 21 + 135778131 AATGAATG-------GGATGTACTCAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658551 21 - 2847728 AATGAATG-------GGATGTACTCAAT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552358 21 - 190850796 AATGAATG-------GAATGTGCTCGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042190 21 - 14256875 AATGAATG-------GAATCTGCTCAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931127 21 - 2196201 AATGAATG-------GAATGTGCCCAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324350 21 - 5030052 AATGAATG-------GAATGTGCTCAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461413 21 - 93316391 AATCTACA-------GAAAGCCCTCAAT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3882951 21 + 3993831 AACTGACA-------GAAAGCACTCAAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168456 20 - 11315646 AA-TGACA-------CAAAGTACTCAAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86504713 28 - 129401213 AATGAGTAAATAAATGAATTTATTTTat i mm10.chr8 I 27 I 162 s dasNov3.JH570353 1354791 21 - 2520184 AAAGAAAA-------GAAAGTGATCCAT i dasNov3.JH570353 I 1007 C 0 e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=124376.000000 s hg38.chr4_KI270789v1_alt 24297 11 + 205944 AACTATTTTTA s panTro5.chr4 192816557 11 + 194502333 AACTATTTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701091 11 + 195804263 AACTATTTTTA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112622722 11 + 115148730 AACCATTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907684 11 + 190429646 AACTATTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855127 11 + 189454096 AACTATTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236524 11 - 25927173 AACTATTTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271197 11 + 4669795 AACTATTTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227882 11 + 135778131 AACTATTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658572 11 - 2847728 AACTATTTTTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189552379 9 - 190850796 GAC--TTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042211 11 - 14256875 GACTGTTTTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931148 11 - 2196201 GACTGTTTTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324371 11 - 5030052 GACTGTTTTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461434 11 - 93316391 GACTATTTTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3882972 11 + 3993831 GACTATTTTTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168476 11 - 11315646 GACTATTTTTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86504903 11 - 129401213 atctatctatc i mm10.chr8 I 162 I 1 s dasNov3.JH570353 1354812 11 - 2520184 GACTGTTTTTA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16862093 215 - 59632846 I e colAng1.NW_012116221v1 788811 0 + 2368649 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=158142.000000 s hg38.chr4_KI270789v1_alt 24308 23 + 205944 ATCTATTTAGTTATG--------------------------------AAGGAC----------------------------------------------CA s panTro5.chr4 192816568 23 + 194502333 ATCTATTTAGTTATG--------------------------------AAGGAC----------------------------------------------CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701102 23 + 195804263 ATCTATTTAGTTATG--------------------------------AAGGAC----------------------------------------------CA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112622733 23 + 115148730 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907695 23 + 190429646 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855138 23 + 189454096 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236535 23 - 25927173 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271208 23 + 4669795 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227893 23 + 135778131 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658583 23 - 2847728 ATCTATTTAGGTATG--------------------------------AATGAC----------------------------------------------CA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 788811 23 + 2368649 atctaTTTAGTTATG--------------------------------AATGAC----------------------------------------------CA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552388 23 - 190850796 ATCTAGGAAGATACG--------------------------------AATGAC----------------------------------------------CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042222 23 - 14256875 ATCTAGGAAGGTGCG--------------------------------AATGAC----------------------------------------------CG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931159 23 - 2196201 ATCTGGGAAGGTACG--------------------------------AATGAC----------------------------------------------CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324382 23 - 5030052 ATCTAGGAAAGTATG--------------------------------AATGAC----------------------------------------------CA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461445 19 - 93316391 A----TGTATGTAGG--------------------------------AGTGAA----------------------------------------------TA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3882983 23 + 3993831 ATGTCTGTATGTAGG--------------------------------AGTGAA----------------------------------------------TA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168487 23 - 11315646 ATATATGTGTGAATG--------------------------------ATTGAA----------------------------------------------TA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86504915 101 - 129401213 atctatctatctatgtgACTTagacatcatctagttctgtaacaccaactgacttcatagtcactatctttctgcctcagatttccaagtctagaaataca i mm10.chr8 I 1 C 0 s dasNov3.JH570353 1354823 23 - 2520184 ATTTATATATGCACA--------------------------------AATGAA----------------------------------------------TA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16862093 215 - 59632846 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=5808432.000000 s hg38.chr4_KI270789v1_alt 24331 379 + 205944 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATAA-AGAGTAACTAAGCTGAATTTCCTTCCTTTGGCAAAGGCTGTCCCTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAAAACATTTTGTTCAGGTGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCAAGGGATA-TTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC s panTro5.chr4 192816591 379 + 194502333 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATAA-AGAGTAACTAAGCTGAATTTCCTTCCTTTGGCAAAAGCTGTCCCTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCGAAACATTTTGTTCAGGTGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCAAGGGATA-TTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701125 379 + 195804263 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATAA-AGAGTAACTAAGCTGAATTTCCTTCCTTTGGCAAAGGCTGTCCCTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCGAAACATTTTGTTCAGGTGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCGAGGGATA-TTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112622756 375 + 115148730 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCGTTCCTTTGGCAAAGGCTGTCCCTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAAAACATTTTGTTCAGGTGGCAAAGTGGTGTCTTCAATTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCAAGGGATA-TTTTTTCAACTGAAGCCTCCTAATTGGTTATCAATGAGTGTGATTCACATTCTCCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGAT---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188907718 380 + 190429646 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGAGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCCTTAAACAACTAACGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCTATGCTCGAGGGATATTTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTATGATTCACATTCTACTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855161 380 + 189454096 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGAGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCCTTAAACAACTAACGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCTATGCTCGAGGGATATTTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTATGATTCACATTCTACTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236558 380 - 25927173 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGAGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCCTTAAACAACTAACGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCTATGCTCGAGGGATATTTTTTTCAACCATAGCCTCCTAATTGTTTATCAATGAGTATGATTCACATTCTACTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271231 380 + 4669795 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGAGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCCTTAAACAACTAATGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCTATGCTCGAGGGATATTTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTATGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134227916 380 + 135778131 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGGGAGACAAAAGATTA-AGAATAACTAAGTTGAATTTCCTTACTTTGGCAAGGGCTATCCCTTAAACAACTGATATATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATTGGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCTTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCGAGGGATATTTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATTTGTGAGCTCCTTCTGGAGCTCCTTAAAGATAGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658606 380 - 2847728 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTATCTTGAGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCCTTAAACAACTAATGTATTGTCAGAAAGTGATTTA---AACTATGTTCATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTTGTTCAGATGGCAAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCTATGCTCGGGGGATATTTTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTATGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 788834 380 + 2368649 AATAAA--------------------TGAGTGGATGGATTTCTAGGCACTATCTTGGGAGACAAAAGATTA-AGAGTAACTAAGTTGAATTTCCTTACTTTGGCAAAGGCTATCCTTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---AACTATGTACATGCAGCAACAAGCATCTGTTTTGTAAATAACCAGAACATTTCGTTCAGATGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCAAGGGATATTTTTTTCAACTAAAGCCTCCTAATTGTTTATCAATGAGTGTGAATCACATTCTGCTTTATCTGTGAGCTCCTTCTTGACCTCCTTAAAGATAGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552411 378 - 190850796 AATAAA--------------------TGCGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATTC-AGAGTAACCAAGCTGAATTTCCTTACTTTGGCAAAGGCGGTCCCTTAAACGACTGGTGTATTGTTGGAAAGTGATTTA---TGCTACGTTCATGCGGCAGATGGCATCTGTTTTGTAAAGAACCAAAGCATTTTGTTCAGATGGCGAAGTGGTATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAACTGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCCCGAGGGATA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTCCTTGAGCTTCTGAAAGATAACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042245 378 - 14256875 AATAAA--------------------TGGGTGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATTG-AGAGTAACCAAGTTGAATTTCTTTACTTTGGCAAAGGCTGTCCCTTAAACAACTGGTGTATTGTCAGAAAGTGATTTA---CACTATGTTCACACGGCAGCAAGCATCTGTTTTGTAAATAACCAAAGCATTTTGTTCAGATGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAACTGCTTCTAATTAATCTAATGGCTTAATTAAATCCATGCTCGAGGGATA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCATGAGCTCCGGAAAGATAACC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931182 378 - 2196201 TATAAA--------------------TGGGCGGATGGATTTCTAGGCACCGTCTTGGGAGACAAAAGATTA-AGAGTAACCAAGCTGAATTTCCTTACTTTGGCAAAGTCTGTCCCTTAAACGACTGATGTATTGTCGGAAAGTGATTTA---CACTACGTTCACGCGGTAGCAAGCATCTGTTTTGTAAATAACCAAAGCATTTTGTTCAGAGGGCAAAGTGGGATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAACTGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCGAGGGATA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGCCTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTGAAAGATAACC i cebCap1.NW_016107886v1 C 0 I 213 s aotNan1.NW_018492112v1 3324405 378 - 5030052 AATAAA--------------------TGGATGGATGGATTTCTAGGCACTGTCTTGGGAGACAAAAGATTA-AGAGCAACCAAGTTGAATTTCCTTACTTTGGCAAAGGCTGTCCCTTAAACGACTGGTGTATTGTCAGAAAGTGATTTA---CACTATGTTCATGTAGCAGCAAGCATCTGTTTTGTAAATAACCAAAGCATTTTGTTCAGATGGCAAAGTGGTATCTTCAATTTAGAACTGACCAGCCTTTGGT-GAACTGCTTCTAATTAATCTAATTGCTTAATTAAATCCATGCTCCAGGGATA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGAGTGTGATTCATATTCTGCTTTATGTGTGAGCTCCTTCTTGAGCTCCTGAAAGATAACC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461464 380 - 93316391 AATAAG--------------------TGGATGGATGGATTCCTAGGCACTGTCTTGAGAGATAAAAGATTA-AGGGCAACTAAATTGAATTCCTTTATTTTGGCAAAAGCTATTCTTTAAACAACTGGTATATTGTCAGAAAGTGATTTAAATAACTATGTTTATGCAGCAACAAGCATCTGTTTTGTAAATAATC-AAACATTTTGTTCAGATGGCAAAGTGATATCTTTCATTTAGAACTGACCAGGCTTTGGT-GAAATGCTTCTAATTAACCTAATTGATTAATTAAATCCACGCCTGAGGGATA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGGGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3883006 378 + 3993831 AGTAAG--------------------TGGATGGATGGATTCCTAGGCACTGTCTTGAGAGATAGAAGATTA-AGGAGAACTAAATTGAATTCCTTTATTTTGGCAAAAGCTATTCCTTAAACAACTGGTATATTGTCAGAAAGTGATTTA---AACTATATTTATGCAGCAACAAGCATCTGTTTTGTAAATAACCAAAACATTTTGTTCAGATGGCAAAATGATATCTTCAGTTTAGAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAACCTAATTGATTAATTAAATCCATGCCCAAGGGGTA--TTTTTCAACCAAAGCCTCCTAATTGTTTATCAATGGGTGTGATTCACATTCTGCTTTATCTGTGAGCTCCTTCTTGAGCTCCTTAAAGATAGCC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168510 365 - 11315646 AATAAG--------------------TGGGCAGCT-GCTTTCTAGGCATTGTTGTGGGAGAATAAAGATTA-AGGGAAACTAAATTGAATTTCCTTATTTTGGCAAAAGCTATTCCTTAAATAACTGGTGTATTGTCAGAAAGTGATTTA---AACCATGTTTATACAGCAACAAGCATCTATTTTGTAAATAACCAAAACATTTTGTTCAGATGGCAAAGTG------------TAAAACTGACCAGCCTTTGGT-GAAATGCTTCTAATTAATCTAATTGATTCATTAAATCTATGCTCAAGGGATA--GTTTTCAACCAAATCCTACTAATTGTTTATCAATGAGTGTGATTCACATTCTACTTTATCTGTGAGTTCCTTCTTGGGCTCTTTAAAGATAGCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86505016 370 - 129401213 aatAAATATGCTATTATTCTAAGTTCTGCATGTACAGATTCTTA-GTACTGTCTTGGGAGGTGAAAGATTG-ATG----------TGAGTTCCCTTATTATGGCAAAGAAT----TTTATCAAACATGTGTGCTATTAGAAAACATTTTA---GA-------------GACAAATGTATCTGATTTTTGAGTAATTAAAATGCTTTGTTCAGATGGTAAAGTTGTATCTTCACTATAGAACTGACCACACTTTGCT-AATAATATCCTAATTAATCTAATTGATTAAGTAAATCTATGCTTAAGGTCAA--TTTTTCAACCCAAACCTGCTAATTGTTTATCAATGGGCATGATTCACATTTTGCTTTATCTGTGAGTTCCTTCTGGAGTTCTCTAAATATAGCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16862308 373 - 59632846 AATAAG--------------------TGGTTGGATGCACTCCTAGGATCGGTTCTGGGCGGTAAAATACTA-AGTTCAACTAAGCTGAATTCTCTTACTTTGGCAAAGGCTATC---TAAATAACTGGTGTATTGTCAGAAAGTGATTTA---AATTA-ATTCATAGAGCAATAAGCATCTGTATTA-AAATAACCCAAACATTTTATTCAGGTGGCTAAGTGGTATATCCAATTCAGAACTGACCAGCCTTTGGT-GAAATAATTCTAATTAATCTAATTGATTCATTAAATCCATGCTTGAGGGATA--TTTTTCAACCAAAGCCTCTTAATTGTTTATCAATGGATGTGACTCACATTCAGCTTTATCTGTGAACTTCTTCTTGAGCTTCTTAAAGATAGCC i canFam3.chr16 I 215 C 0 s dasNov3.JH570353 1354846 365 - 2520184 AATGAA--------------------TACTTAACTGCATTCTTAGGCACTATCTAGTG-GGTAAAAGACTACAGGGCAACTAGGCTTAATTCCTTTATTTTGTCAAGGGCATTCTCTTGAA--------ACATTTCCAGAATATGAGTTA---AGCTATGTTCATGCAGCAACAAGCATCTTTTTCCTAGATAATCAAAATGTTTTGTTCAGATTGCTCAGTGGTA-----AATTCAGAACTGATCACCCTTTGGTAAAAATACTTCTCATTAAGTTAATTGATTAATTAAATCCATGCTTGAGCAAAA--TTTTTCAAACAAAGCCTCCTAATTGATTATCAATGGGTATAAATCACAATCTCTTTTATCTGTGAGCTT-TTCTTTAGCTCCATAAAGATGGCC i dasNov3.JH570353 C 0 C 0 e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=21349.000000 s hg38.chr4_KI270789v1_alt 24710 2 + 205944 AA s panTro5.chr4 192816970 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701504 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s rheMac8.chr5 188908098 2 + 190429646 GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855541 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236938 2 - 25927173 GA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271611 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228296 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658986 2 - 2847728 GA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789214 2 + 2368649 GA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552789 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042623 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931773 2 - 2196201 AA i cebCap1.NW_016107886v1 I 213 C 0 s aotNan1.NW_018492112v1 3324783 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17461844 2 - 93316391 AA i micMur3.chr14 C 0 I 195 s proCoq1.NW_012145301v1 3883384 2 + 3993831 AA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168875 2 - 11315646 GG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86505386 2 - 129401213 AA i mm10.chr8 C 0 C 0 s canFam3.chr16 16862681 2 - 59632846 AA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355211 2 - 2520184 AA i dasNov3.JH570353 C 0 C 0 e nomLeu3.chr7b 112623131 0 + 115148730 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=43830.000000 s hg38.chr4_KI270789v1_alt 24712 3 + 205944 AGA s panTro5.chr4 192816972 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701506 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s rheMac8.chr5 188908100 3 + 190429646 AGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855543 3 + 189454096 AGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236940 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3271613 3 + 4669795 AGA i cerAty1.NW_012001672v1 C 0 I 394 s chlSab2.chr7 134228298 3 + 135778131 AGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658988 3 - 2847728 AGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789216 3 + 2368649 AGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552791 3 - 190850796 AGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042625 3 - 14256875 AGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931775 3 - 2196201 AGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324785 3 - 5030052 AGA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883386 3 + 3993831 AGA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168877 3 - 11315646 AGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86505388 3 - 129401213 GGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16862683 3 - 59632846 AGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355213 3 - 2520184 AGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17461846 195 - 93316391 I e nomLeu3.chr7b 112623131 0 + 115148730 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=-45753.000000 s hg38.chr4_KI270789v1_alt 24715 4 + 205944 CAG-----G s panTro5.chr4 192816975 4 + 194502333 CAG-----G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701509 4 + 195804263 CAG-----G i panPan2.chr4 C 0 C 0 s rheMac8.chr5 188908103 2 + 190429646 --C-----G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855546 2 + 189454096 --C-----G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236943 2 - 25927173 --C-----G i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134228301 2 + 135778131 --C-----G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658991 2 - 2847728 --C-----G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789219 4 + 2368649 CGG-----G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552794 9 - 190850796 TGGGTGGCG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042628 4 - 14256875 CAG-----G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931778 4 - 2196201 CAG-----G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324788 4 - 5030052 CAG-----G i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883389 2 + 3993831 ------GA- i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11168880 3 - 11315646 ------GAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86505391 4 - 129401213 -----GAAG i mm10.chr8 C 0 I 1687 s canFam3.chr16 16862686 3 - 59632846 ------AAG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1355216 4 - 2520184 -----AGAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17461846 195 - 93316391 I e cerAty1.NW_012001672v1 3271616 394 + 4669795 I e nomLeu3.chr7b 112623131 0 + 115148730 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=741782.000000 s hg38.chr4_KI270789v1_alt 24719 70 + 205944 GGAAAAGAGGTTTTAGAAGCAC-TGCCTCACATTGAATGGACCTTAGTCGGTGCGTAGAATAGAAGCTGGC s panTro5.chr4 192816979 70 + 194502333 GGAAAAGAGGTTTTAGAAACAC-TGCCTCACATTGAATGGACCTTAGTCGATGGGTAGAATAGAAGCTGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701513 70 + 195804263 GGAAAAGAGGTTTTAGAAACAC-TGCCTCACATTGAATGGACCTTAGTCGATGGGTAGAATAGAAGCTGGC i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623131 65 + 115148730 -----AGAGGTTTTAGAAACAC-TGCCTCACATTGAATGGACATTAGTTGAGGGGTAGAATAGAAGCTGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908105 70 + 190429646 GGAAAAGAGGTTTTAGAAACAC-TGCTTTGCTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855548 70 + 189454096 GGAAAAGAGGTTTTAGAAACAC-TGCTTCACTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24236945 70 - 25927173 GGAAAAGAGGTTTTAGAAACAC-TGCTTCGCTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134228303 70 + 135778131 GGAAAAGAGGTTTTAGAAACAC-TGCTTCACTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2658993 70 - 2847728 GGAAAAGAGGTTTTAGAAACAC-TGCTTCGCTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789223 70 + 2368649 GGAAAAGAGGTTTTAGAAACAC-TGCTTCACTTTGAATGGACATTAGTCGATGGGTAGAATAGAAGCTGGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552803 70 - 190850796 GGGGGGGAAGTTTTACAAACAC-TGCCTCACAGTGAGTGGACATCAGTTGGTGGGTGGAATAGAAGCCGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042632 70 - 14256875 GTAAAAGAGGTTTTAGAAACAC-TGCCTCACACTGAGCGGACATTAGTTGATGGGTGGAATAGAAGCTGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931782 70 - 2196201 GGAAAAGAGGTTTTAGAAACAC-CGCCTCACATGGAGTGGACATTCGTTGATGGGTGGAATAGAAGCTGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324792 70 - 5030052 GGAAAAGAGGTTTTAGAAACAC-TGCCTCACACTGAGTGGACATTAGCTGATGGGTGGAATAGAAGCTGGC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883391 70 + 3993831 GGGAAAAATGTTTTAAAAACAC-TGCCTCATATTGAGTGGACTTTACTCCATGGGTAGAACGGAAGCTGGC i proCoq1.NW_012145301v1 C 0 I 175 s otoGar3.GL873580 11168883 69 - 11315646 GGGGAAAGTGTTTTAAAAAC-C-TGCTTCATATTGAGCGGACTTTAATCAATGAGTGGAAAAGCAGCTGGC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16862690 71 - 59632846 GGGGAAAATGGTTTAGAAACACTTGCCTCATATTGAATGGACTTTAATCAGTGGGGTGAATGGAAGCTGAT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1355220 71 - 2520184 GAGAAATAATGTTTAGAAACACTTGCCTCATAGTGAATAGACTTTAGTCAATGGATAGAATAGAAGCTGGT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e cerAty1.NW_012001672v1 3271616 394 + 4669795 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=142620.000000 s hg38.chr4_KI270789v1_alt 24789 23 + 205944 AGGTCACAGTGTTTCT---AAGTAGA s panTro5.chr4 192817049 23 + 194502333 AGGTCACAGTGTTTCT---AAGTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701583 23 + 195804263 AGGTCACAGTGTTTCT---AAGTAGA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623196 23 + 115148730 AGGTCACAGTATTTCT---AAATAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908175 23 + 190429646 AAGCCACAGTATTTCT---AAATAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855618 23 + 189454096 AAGCCACAGTATTTCT---AAATAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237015 23 - 25927173 AAGCCACAGTATTTCT---AAATAGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134228373 23 + 135778131 AAGCCACAGTATTTCT---AAATAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659063 23 - 2847728 AAGCCACAGTATTTCT---AAATAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789293 23 + 2368649 AAGCCACAGTATTTCT---AAATAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552873 25 - 190850796 AGGTCACAGTATTTCTCG-AAATAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042702 24 - 14256875 AGGTCACAGTATTTCCTG-AAA-AGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931852 25 - 2196201 AGGTCACAGTATTTCCTG-AAATAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324862 25 - 5030052 AGGTCACAGTATTTCTTG-AAATAGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11168952 11 - 11315646 CCTTGACTGTG--------------- i otoGar3.GL873580 C 0 I 6 s canFam3.chr16 16862761 26 - 59632846 AAGTCACTCTATTTGTTGAAAATAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355291 21 - 2520184 GAGTCATAGTGTTTGC---TAATA-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e cerAty1.NW_012001672v1 3271616 394 + 4669795 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=273643.000000 s hg38.chr4_KI270789v1_alt 24812 52 + 205944 GCACAGCCAACCTTAGGCTT-CATC--------------------TTACCATGAAACAT-------------AGAGCCTCCTTCCT s panTro5.chr4 192817072 52 + 194502333 GCACAGCCAACCTTAGGCTT-CATC--------------------TTACCATGAAACAT-------------AGAGCCTCCTTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701606 52 + 195804263 GCACAGCCAACCTTAGGCTT-CATC--------------------TTACCATGAAACAT-------------AGAGCCTCCTTCCT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623219 52 + 115148730 GCACAGCCAGCCTTAGGCTT-CATC--------------------TTACCATGAAACAT-------------AGAGCCTCCTTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908198 52 + 190429646 GCACAGCCAACCTTAAGCTT-CATC--------------------TTAGCATGAAACAT-------------AGAGCCTCCTTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855641 52 + 189454096 GCACAGCCAACCTTAAGCTT-CATC--------------------TTAGCATGAAACAT-------------AGAGCCTCCTTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237038 52 - 25927173 GCACAGCCAACCTTAAGCTT-CATC--------------------TTAGCATGAAACAT-------------AGAGCCTCCTTCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272010 50 + 4669795 GCACAGCCAACCTTAAGCTT-CATC---------------------TAGCATG-AACAT-------------AGAGCCTCCTTCCT i cerAty1.NW_012001672v1 I 394 I 98 s chlSab2.chr7 134228396 53 + 135778131 GCACAGCCAACCTTAAGCTTCCATC--------------------TTAGCATGAAACAC-------------AGAGCCTCCTTCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659086 52 - 2847728 GCACAGCCAACCTTAAGCTT-CATC--------------------TTAGCATGAAACAT-------------AGAGCCTCCTTCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789316 52 + 2368649 GCACAGCCAAACTTAAGCTT-CATC--------------------TTAGCATGAAACAT-------------GGAGCCTCCTTCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552898 36 - 190850796 GCACAGCCAACCGTAGGCTT-CATA--------------------TGACCATGAAAC----------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042726 37 - 14256875 GCACAGCCAACCGTAGGCTT-CATG--------------------TGACCATGAAACA---------------------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931877 37 - 2196201 GCACAGCCAACCGTAGGCTT-CACA--------------------TGACCACGAAACA---------------------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324887 36 - 5030052 GCACAGCCAACCTTAGGCTT-CATG--------------------TGACCATGAAAC----------------------------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11168969 18 - 11315646 GCACAGC---------GCCT-CATC--------------------CCT-------------------------------------- i otoGar3.GL873580 I 6 C 0 s canFam3.chr16 16862787 83 - 59632846 ATGCAGATAATCTT--GTTT-CTTTTTTCCTTCTTTTTTTCTTCTTTGTCATGGAACTTACTATGTTCAATCATATGCTCATTTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355312 46 - 2520184 -TACAGC-----TTATGTGT-TCTT--------------------CTAACAGGGAACAC-------------ATTGTCTAACTCAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=508450.000000 s hg38.chr4_KI270789v1_alt 24864 90 + 205944 TTGTGATTCACAAAGCCCTTTCCATCACTCTGGCCATCCCTCCAGCTCTTTTGCCCG-TATT--TCCC----CGTTTCTGCTCTTGTTTCCACACAT s panTro5.chr4 192817124 90 + 194502333 TTGTGATTCACAAAGCCCTTTCCATCACTCTGGCCATCCCTCCAGCTCTTTCGCCTG-TATT--TCCC----CGTTTCTGCTCTTGTTTCCACACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701658 90 + 195804263 TCGTGATTCACAAAGCCCTTTCCATCACTCTGGCCATCCCTCCAGCTCTTTCGCCTG-TATT--TCCC----CGTTTCTGCTCTTGTTTCCACACAT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623271 88 + 115148730 ACGTGATTCACGAAGCCCTTTCCATCACTCTGGCCATCCCTCCAGCTCTTTTGCCTG-TGTT--CCCC----CGTTTCTGCTC--GTTTCCATACAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908250 88 + 190429646 ATGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCCAGCTCTTTCACCTC-TGTT--CCCC----TGTTTCTGCTCTTGTTTCCATAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855693 88 + 189454096 ATGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCCAGCTCTTTCACCTC-TGTT--CCCC----TGTTTCTGCTCTTGTTTCCATAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237090 88 - 25927173 ATGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCCAGCTCTTTCACCTC-TGTT--CCCC----TGTTTCTGCTCTTGTTTCCATAT-- i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134228449 86 + 135778131 ATGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCTAGCTCTTTCTCCTC-TGTT--CCC------GTTTCTGCTCTTGTTTCCATAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659138 88 - 2847728 ATGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCCAGCTCTTTCACCTC-TGTT--CCCC----TGTTTCTGCTCTTGTTTCCATAT-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789368 88 + 2368649 GTGCGATTCAGGAAGCACTTTCCATCACTGTGGCCATCCCTCCAGCTCTTTCACCTC-TGTT--CCCC----TGTTTCTGCTCTTGTTTCCATAT-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189552934 86 - 190850796 --GTGATTCAGGAAGACCTCTCAATCACGCTGGCCACCCATCCAGCTCTTCTGCCTG-TGCT--CCT------GTTTCCGCTCTTGATTCCATACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042763 75 - 14256875 -TGTGATTCACGAAGCCCTC------------ACCGTCCCTCCAGCTCTTCCGCCTG-TGTT--CCC------GTTTCTGCTCTTCATTCCATACAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 931914 86 - 2196201 -TGTGATTCTCGAAGACCTCTCAATCACTCTGGCCATCCCTGCAGCTCTTCTG-CTG-TGTT--CCT------GTTTCTGCTCTTGATTCCATACAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3324923 86 - 5030052 --GTGATTCACGAAGATCTCTCAATCACGCTGGCCATCCCTCCAGCTCTTCCGACTG-TGTT--CCC------GTTTCTGCTCTTGATTCCATACAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11168987 72 - 11315646 ATGCAGTTAACAAAGGCCCCCCCACC-------CCCGCCCTCACATTCTCCCTCCT-----------------CTTTCT-CTCTAGATTTCATTCAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16862870 92 - 59632846 CTATAATTAACAAAGACCTCTTGATTATGCTGGCTATCCCTGGAGATTTCTTATATT-CGTTTGCCCC----TCTTCTTGCTCTTCATATCATGCAC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355358 89 - 2520184 ----ACATAATGAAG--CTTTTGGTTATTCTAACCCCCATTTCAGCTCTTTCATGTGCTGCT--CCTCCTCTCTTTTTTGTTCTTCATTTCCTGCAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e cerAty1.NW_012001672v1 3272060 98 + 4669795 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=246334.000000 s hg38.chr4_KI270789v1_alt 24954 20 + 205944 TCTCTCTGAAACTCTCAAAA s panTro5.chr4 192817214 20 + 194502333 TCTCTCTGAAACTCTCAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701748 20 + 195804263 TCTCTCTGAAACTCTCAAAA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623359 20 + 115148730 TCTCTCTGAAACTCTCAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908338 20 + 190429646 TCTCTCTGAAACTCTCAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855781 20 + 189454096 TCTCTCTGAAACTCTCAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237178 20 - 25927173 TCTCTCTGAAACTCTCAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272158 20 + 4669795 TCTCTCTGAAACTCTCAAAA i cerAty1.NW_012001672v1 I 98 C 0 s chlSab2.chr7 134228535 20 + 135778131 TCTCTCTGAAACTCTCAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659226 20 - 2847728 TCTCTCTGAAACTCTCAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789456 20 + 2368649 TCTCTCTGAAACTCTCAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553020 20 - 190850796 TCTCTCTGAAACTCTCAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042838 20 - 14256875 TCTCTCTGAAACTCTCAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932000 20 - 2196201 TCTCTCTGAAACTCTCAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325009 20 - 5030052 TCTCTCTGAAACTCTCAAAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11169059 20 - 11315646 TCTCTTTAAAATCCTCGAAA i otoGar3.GL873580 C 0 I 339 s canFam3.chr16 16862962 20 - 59632846 TCTCTTCCACATCCTCAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1355447 18 - 2520184 --TCTTTCTCACTCTCAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=83171.000000 s hg38.chr4_KI270789v1_alt 24974 9 + 205944 ATACCTTCT s panTro5.chr4 192817234 9 + 194502333 ATACCTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701768 9 + 195804263 ATACCTTCT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623379 9 + 115148730 ATACCTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908358 9 + 190429646 ATACTTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855801 9 + 189454096 ATACTTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237198 9 - 25927173 ATACTTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272178 8 + 4669795 ATAACTT-T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228555 9 + 135778131 ATACCTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659246 9 - 2847728 ATACTTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789476 9 + 2368649 ATACCTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553040 9 - 190850796 ATACCTTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042858 9 - 14256875 ATACCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932020 9 - 2196201 ATACCTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325029 9 - 5030052 ATACCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11169418 9 - 11315646 ATACCTTCT i otoGar3.GL873580 I 339 C 0 s canFam3.chr16 16862982 9 - 59632846 ATGCCTTCT i canFam3.chr16 C 0 I 182 s dasNov3.JH570353 1355465 8 - 2520184 ATATCACC- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=133301.000000 s hg38.chr4_KI270789v1_alt 24983 17 + 205944 C--CTCCCTTTCCATATTT s panTro5.chr4 192817243 17 + 194502333 C--CTTCCTTTCCATATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701777 17 + 195804263 C--CTCCCTTTCCATAttt i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623388 17 + 115148730 C--CTCCCTTTCCATATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908367 17 + 190429646 C--CTCCCTTTCCATATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855810 17 + 189454096 C--CTCCCTTTCCATATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237207 17 - 25927173 C--CTCCCTTTCCATATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272186 16 + 4669795 C--CCCCCTTTCCATA-GT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228564 17 + 135778131 C--CTCCCTTTCCATATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659255 17 - 2847728 C--CTCCCTTTCTATATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789485 17 + 2368649 C--CTCCCTTTCCATATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553049 19 - 190850796 CCTCCCCCCTTCAGTATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042867 17 - 14256875 C--CCCCCTTTCTATATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932029 17 - 2196201 C--CCTGCTTTCTGTATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325038 17 - 5030052 C--CCCCCTTTCTATATTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11169427 17 - 11315646 C--TGCCCTTGCTGTATTC i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1355473 9 - 2520184 ----------TTCATATTC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=136216.000000 s hg38.chr4_KI270789v1_alt 25000 16 + 205944 TCTTCATGTATTTTTC s panTro5.chr4 192817260 16 + 194502333 TCTTCGTGTAtttttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192701794 16 + 195804263 tcttcatgtatttttc i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623405 16 + 115148730 TCTTCATGTATTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908384 16 + 190429646 TCTTCCCGTAAttttc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855827 16 + 189454096 TCTTCCCGTAAttttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237224 16 - 25927173 TCTTCCCGTAATTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272202 16 + 4669795 TCTTCCTGTAATTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228581 16 + 135778131 TCTTCATGTAATTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659272 16 - 2847728 TCTTCCCGTAATTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789502 16 + 2368649 TCTTCACGTAATTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553068 16 - 190850796 TCTTCATATAtttttc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042884 16 - 14256875 TCTTCATGTATttttc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932046 16 - 2196201 TCTTCATGTATTtttc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325055 16 - 5030052 TCTTCATGTATTTTTC i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1355482 16 - 2520184 TCATGATATATTTTTC i dasNov3.JH570353 C 0 I 1280 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=116042.000000 s hg38.chr4_KI270789v1_alt 25016 29 + 205944 TTTTTTCtttctt---------tttacttttttttttt- s panTro5.chr4 192817276 29 + 194502333 ttttttctttctt---------tttacttttttttttt- i panTro5.chr4 C 0 I 11 s panPan2.chr4 192701810 29 + 195804263 ttttttctttctt---------tttacttttttttttt- i panPan2.chr4 C 0 I 204 s nomLeu3.chr7b 112623421 27 + 115148730 TCTTTTCtttctt---------ttttcttttttttt--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908400 38 + 190429646 ttttcttttcttttctttcctttttttttttttttttt- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855843 38 + 189454096 ttttcttttcttttctttcctttttttttttttttttt- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237240 32 - 25927173 TTttctttccttt------ccttttttttttttttttt- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272218 29 + 4669795 tttttcttctttt---------tttttttttttttttt- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228597 30 + 135778131 ttttcttttctttc--------tttttttttttttttt- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659288 37 - 2847728 TTTTCTTttctttccttt-ttttttttttttttttttt- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789518 29 + 2368649 ttttcttttcttt---------cttttttttttttttt- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553084 21 - 190850796 ttttat------------------ttctttttttttttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042900 25 - 14256875 ttttgttt--------------tctttttttttttttct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932062 26 - 2196201 ttttctttc-------------ttttttttttttttttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325071 32 - 5030052 TTttctttctttc-------tttcttttttttttttttt i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=269758.000000 s hg38.chr4_KI270789v1_alt 25045 43 + 205944 gagaca----gagtcttgctgtgtc---acccaggctggagtgtagtggc s panTro5.chr4 192817316 43 + 194502333 gagaca----gagtcttgctctgtc---acccaggctggagtgtagtggc i panTro5.chr4 I 11 C 0 s nomLeu3.chr7b 112623448 43 + 115148730 gagaca----gagtcttgctctgtc---acccaggctggagtgcaatggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908438 43 + 190429646 gagaca----gagtcttgctctgtc---actctggctggagtgtagtggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855881 43 + 189454096 gagaca----gagtcttgctctgtc---actcaggctggagtgcagtggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237272 43 - 25927173 gagaca----gagtcttgctctgtc---actcaggctggagtgtagtggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272247 50 + 4669795 gagacagcccgagtcttgccctgtcccaactcaggcctgggtgtagtggc i cerAty1.NW_012001672v1 C 0 I 18 s chlSab2.chr7 134228627 43 + 135778131 gagaca----gagtcttgctctgtc---acccaggctggagtgtagtggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659325 43 - 2847728 gagaca----gagtcttgctctgtc---actcaggctggagtgtagtggc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789547 43 + 2368649 gagaca----gagtcctgctctgtt---gcccaggctggagtgtagtggc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553105 43 - 190850796 gagatg----gagtcttgctctgtg---gtctaggctgaagtgcagtggc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042925 34 - 14256875 gagatg-------------tctgtc---gtctaggctgaagtgcagtggc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932088 43 - 2196201 gagatg----gagtctcgctctgtc---atctgggctgaagtgcagcagc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325103 43 - 5030052 gagatg----gagtctcactctgtc---gtctaggctgaagtgcagtggc i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=73946.000000 s hg38.chr4_KI270789v1_alt 25088 15 + 205944 gtaatcttggcttac s panTro5.chr4 192817359 15 + 194502333 ataatcttggcttac i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112623491 15 + 115148730 gcaatcttggctcac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908481 15 + 190429646 gcaatctcagctcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855924 15 + 189454096 gcaatctcagctcac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237315 15 - 25927173 acaatctcagctcac i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134228670 15 + 135778131 gcaatctcagctcac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659368 15 - 2847728 gcaatctcagctcac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789590 14 + 2368649 gcaa-ctcagttcac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553148 15 - 190850796 acgatctccgctcac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042959 15 - 14256875 acaatctccgctcac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932131 15 - 2196201 acaatctccactcac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325146 15 - 5030052 atgatctccgctcac i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e cerAty1.NW_012001672v1 3272297 18 + 4669795 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=625750.000000 s hg38.chr4_KI270789v1_alt 25103 90 + 205944 tgcaacctctgcctccccagttcaagcaattctcctgactcagcctcctgagtagctgggactacaggcgcccaccaccatgcctggcta s panTro5.chr4 192817374 90 + 194502333 tgcaacctctgcctccccagttcaagcaattctcctgactcagcctcctgagtagctgggactacaggcgcccaccaccatgcctggcta i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112623506 90 + 115148730 tgcaacctctgcctcccctgttcaagcgattcgcctgactcagcctcctgagtagctaggactacaggcgcccgccaccatgcctggcta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908496 90 + 190429646 tgcaacctctgcctcccaggttcaagccattctcctgactcagcctcctgagtagttgggactacaggcgcctaccatcatgcccagcta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187855939 90 + 189454096 tgcaacctctgcctcccaggttcaagccattctcctgactcagcctcctgagtagttgggactacaggcgcctaccatcatgcccagcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237330 90 - 25927173 tgcaacctctgcctcccaggttcaagccattctcctgactcagcctcctgagtagttgggactacaggcgcctaccatcatgcccagcta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272315 90 + 4669795 tgcaacctctgcctcccaggttcaagccattctcctgactcagtctcctgagtagttgggactacaggcgcctaccatcatgcccagcta i cerAty1.NW_012001672v1 I 18 C 0 s chlSab2.chr7 134228685 90 + 135778131 tgcaacctctgcctcccaggttcaagccattctcctgactcagcctcctgagtagttgggactacaggcgcccaccaccatgcccagcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659383 90 - 2847728 tgcaacctctgcctcccaggttcaagccattctcctgactcagcctcctgagtagttgggactacaggcgcctaccatcatgcccagcta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789604 90 + 2368649 tgcaacctctgcctcccaggttcgagccattctcctgactcagcctcctgagtagctgggactacaggcgcccaccaccatgcccagcta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553163 90 - 190850796 tgcagcctccacctctcacgttcaagagagtctcctgcctcagcctcctgaatatctgagactacaggcatatgccaccatgtccggcta i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13042974 90 - 14256875 ggcaacctctgcctctcacattcaagagcatctcctgcctcagcctcctgaatatctgagactacaggaacccgccaccacgcctggcta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932146 90 - 2196201 tgcaacctccgcctctcacgttcaagcgagtctcctgcctcagcctcctgaatatctgggactacaggcatatgccaccgtgcctggcta i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325161 90 - 5030052 tgcaaccttcgcctctcacgttcaagcaagtctcctgcctcagcctcctgaatatctgggactacaaacatatgccaccatgcctggcta i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=12012.000000 s hg38.chr4_KI270789v1_alt 25193 2 + 205944 at s panTro5.chr4 192817464 2 + 194502333 at i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112623596 2 + 115148730 at i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908586 2 + 190429646 at i rheMac8.chr5 C 0 I 22 s macFas5.chr5 187856029 2 + 189454096 at i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237420 2 - 25927173 at i macNem1.NW_012013133v1 C 0 I 22 s cerAty1.NW_012001672v1 3272405 2 + 4669795 at i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228775 2 + 135778131 at i chlSab2.chr7 C 0 I 22 s manLeu1.NW_012102221v1 2659473 2 - 2847728 at i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789694 2 + 2368649 at i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 932236 2 - 2196201 at i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325251 2 - 5030052 at i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189553253 0 - 190850796 C e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e saiBol1.JH378165 13043064 0 - 14256875 C e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=1365.000000 s hg38.chr4_KI270789v1_alt 25195 1 + 205944 t s panTro5.chr4 192817466 1 + 194502333 t i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112623598 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 789696 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 932238 1 - 2196201 t i cebCap1.NW_016107886v1 C 0 I 89 s aotNan1.NW_018492112v1 3325253 1 - 5030052 t i aotNan1.NW_018492112v1 C 0 I 119 e calJac3.chr3 189553253 0 - 190850796 C e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e saiBol1.JH378165 13043064 0 - 14256875 C e manLeu1.NW_012102221v1 2659475 0 - 2847728 C e chlSab2.chr7 134228777 22 + 135778131 I e cerAty1.NW_012001672v1 3272407 0 + 4669795 C e macNem1.NW_012013133v1 24237422 22 - 25927173 I e macFas5.chr5 187856031 0 + 189454096 C e rheMac8.chr5 188908588 22 + 190429646 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=5933.000000 s hg38.chr4_KI270789v1_alt 25196 6 + 205944 gatata s panTro5.chr4 192817467 6 + 194502333 GACata i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112623599 6 + 115148730 gatata i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3272407 5 + 4669795 -atata i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2659475 5 - 2847728 -atata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789697 6 + 2368649 tatata i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189553253 0 - 190850796 C e cebCap1.NW_016107886v1 932239 89 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e saiBol1.JH378165 13043064 0 - 14256875 C e chlSab2.chr7 134228777 22 + 135778131 I e macNem1.NW_012013133v1 24237422 22 - 25927173 I e macFas5.chr5 187856031 0 + 189454096 C e rheMac8.chr5 188908588 22 + 190429646 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panPan2.chr4 192701839 204 + 195804263 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=14536.000000 s hg38.chr4_KI270789v1_alt 25202 9 + 205944 tatatatat s panTro5.chr4 192817473 9 + 194502333 tatatatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702043 9 + 195804263 tatatatat i panPan2.chr4 I 204 C 0 s nomLeu3.chr7b 112623605 7 + 115148730 --tatatat i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3272412 9 + 4669795 tatacatat i cerAty1.NW_012001672v1 C 0 I 8 s manLeu1.NW_012102221v1 2659480 9 - 2847728 tatacatat i manLeu1.NW_012102221v1 C 0 I 8 s colAng1.NW_012116221v1 789703 9 + 2368649 tatatatat i colAng1.NW_012116221v1 C 0 I 10 e calJac3.chr3 189553253 0 - 190850796 C e cebCap1.NW_016107886v1 932239 89 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e saiBol1.JH378165 13043064 0 - 14256875 C e chlSab2.chr7 134228777 22 + 135778131 I e macNem1.NW_012013133v1 24237422 22 - 25927173 I e macFas5.chr5 187856031 0 + 189454096 C e rheMac8.chr5 188908588 22 + 190429646 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=18910.000000 s hg38.chr4_KI270789v1_alt 25211 112 + 205944 atatatatatatatatatatatatatatatatatacacacacacacacacacacacattatatatatatatatatacacacatatataatgtgtgtgtgtatatatatatat s panTro5.chr4 192817482 70 + 194502333 atatatata----------------------------------cacacacacacacattatatatatata------cacacatatataatgtgtgtgtgtatatatatat-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702052 106 + 195804263 atatatatatatatatatatatatatacacacacacacacacacacacacacacacattatatatataca------cacacatatataatgtgtgtgtgtatatatatatTT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623612 73 + 115148730 atacacaca--------------------------cacacacacacacacacacacattatatacatgta------------tgtat-gtgtgtgtatatatatatatatat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187856031 23 + 189454096 atatatata----------------------------------------catacatgttttat------------------------------------------------- i macFas5.chr5 C 0 C 0 e calJac3.chr3 189553253 0 - 190850796 C e cebCap1.NW_016107886v1 932239 89 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e saiBol1.JH378165 13043064 0 - 14256875 C e colAng1.NW_012116221v1 789712 10 + 2368649 I e manLeu1.NW_012102221v1 2659489 8 - 2847728 I e chlSab2.chr7 134228777 22 + 135778131 I e cerAty1.NW_012001672v1 3272421 8 + 4669795 I e macNem1.NW_012013133v1 24237422 22 - 25927173 I e rheMac8.chr5 188908588 22 + 190429646 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=964.000000 s hg38.chr4_KI270789v1_alt 25323 2 + 205944 at s panPan2.chr4 192702158 2 + 195804263 TT i panPan2.chr4 C 0 I 1 s nomLeu3.chr7b 112623685 2 + 115148730 at i nomLeu3.chr7b C 0 I 6 s calJac3.chr3 189553253 2 - 190850796 at i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043064 2 - 14256875 at i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 932239 89 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e colAng1.NW_012116221v1 789712 10 + 2368649 I e manLeu1.NW_012102221v1 2659489 8 - 2847728 I e chlSab2.chr7 134228777 22 + 135778131 I e cerAty1.NW_012001672v1 3272421 8 + 4669795 I e macNem1.NW_012013133v1 24237422 22 - 25927173 I e macFas5.chr5 187856054 0 + 189454096 C e rheMac8.chr5 188908588 22 + 190429646 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e panTro5.chr4 192817552 0 + 194502333 C e otoGar3.GL873580 11169444 0 - 11315646 C a score=595489.000000 s hg38.chr4_KI270789v1_alt 25325 98 + 205944 ttttttatttttagtagaggtggagtttcaacatgctggccaggctggtcttgagctcctgaccttgtgatccacccgccctggcctcccaaagcgca s panTro5.chr4 192817552 97 + 194502333 -tttttatttttagtagaggtggagtttcaacatgctggccaggctggtcttgagctcctgaccttgtgatccacccaccctggcctcccaaagtgca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702161 98 + 195804263 ttttttatttttagtagaggtggagtttcaacatgctggccaggctggtcttgagctcctgaccttgtgatccacccaccctggcctcccaaagcaca i panPan2.chr4 I 1 C 0 s nomLeu3.chr7b 112623693 98 + 115148730 ttttttatttttagtagaggtggggtttcaacatgttggccaagctggtcttgaactcctaaccttgtgatccacctgccctggcctcccaaagtgca i nomLeu3.chr7b I 6 C 0 s rheMac8.chr5 188908610 98 + 190429646 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccagagtgca i rheMac8.chr5 I 22 C 0 s macFas5.chr5 187856054 97 + 189454096 -tttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccagagtgca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237444 98 - 25927173 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccagagtgca i macNem1.NW_012013133v1 I 22 C 0 s cerAty1.NW_012001672v1 3272429 98 + 4669795 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccagagtgca i cerAty1.NW_012001672v1 I 8 C 0 s chlSab2.chr7 134228799 98 + 135778131 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatccacccgccttggcctcccagagtgca i chlSab2.chr7 I 22 C 0 s manLeu1.NW_012102221v1 2659497 98 - 2847728 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttggactcctgaccttgtgatccacccactttggcctcccagagtgca i manLeu1.NW_012102221v1 I 8 C 0 s colAng1.NW_012116221v1 789722 97 + 2368649 ttttttatttttagtagaggtggggtttcaacatgttggccaggctggtcttgaactcctgaccttgtgatcca-ccgcctcagcctcccaaagtgca i colAng1.NW_012116221v1 I 10 C 0 s calJac3.chr3 189553255 89 - 190850796 ttttgtgtttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgacctcatg---------cctcagcctcccgaagtgtt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043066 89 - 14256875 ttttgtgtttttggtagagacggggtttcaccatgttggccagggtggtctcaatctcctgacctcatg---------cctcagcctcccaaagtgct i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 932239 89 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=246220.000000 s hg38.chr4_KI270789v1_alt 25423 33 + 205944 ggga-ttacagacatgagccaccatgcccggccT s panTro5.chr4 192817649 33 + 194502333 ggga-ttacagacatgagccaccatgcccggccT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702259 33 + 195804263 ggga-ttacagacatgagccaccatgcccggccT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623791 33 + 115148730 ggga-ttacagacatgagccaccatgcccggccT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908708 33 + 190429646 ggga-ttacagacatgagccaccatgcccagcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856151 33 + 189454096 ggga-ttacagacatgagccaccatgcccagcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237542 33 - 25927173 ggga-ttacagacatgagccaccatgcccagccT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272527 33 + 4669795 ggga-ttacagacatgagccaccatgcccagccT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228897 33 + 135778131 ggga-ttacagacatgagccaccatgaccagccT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659595 33 - 2847728 ggga-ttacagacatgagccaccatgcccagccT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789819 33 + 2368649 ggga-ttacagacatgagccaccatgcccggccT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553344 34 - 190850796 gggatttacaggtgtgagccacagtgcccagccT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043155 33 - 14256875 ggga-tcacagacgttagccactgcgcctggccT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932328 33 - 2196201 ggga-ttacagacgttagccaccgcgcctggccT i cebCap1.NW_016107886v1 I 89 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e canFam3.chr16 16862991 182 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169444 0 - 11315646 C a score=9090.000000 s hg38.chr4_KI270789v1_alt 25456 1 + 205944 T s panTro5.chr4 192817682 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702292 1 + 195804263 T i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623824 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908741 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856184 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237575 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272560 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228930 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659628 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789852 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553378 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043188 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932361 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11169444 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16863173 1 - 59632846 T i canFam3.chr16 I 182 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325254 119 - 5030052 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=847993.000000 s hg38.chr4_KI270789v1_alt 25457 83 + 205944 CTTCATGTATTTTTCAAATTAGCAATTTATATTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGCATATCATGCCAGA s panTro5.chr4 192817683 83 + 194502333 CTTCATGTATTTTTCAAATTAGCAATTTATATTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGCATATCATGCCAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702293 83 + 195804263 CTTCATGTATTTTTCAAATTAGCAATTTATATTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGCATATCATGCCAGA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623825 83 + 115148730 CTTCATGTATTTTTCAAATTAGCAATTTATATTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGCGTATCATACCAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908742 83 + 190429646 cttcatgtattttTCAAATTAGCAATTTATGGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856185 83 + 189454096 cttcatgtattttTCAAATTAGCAATTTATGGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237576 83 - 25927173 CTTCATGTATTTTTCAAATTAGCAATTTATGGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272561 83 + 4669795 CTTCATGTATTTTTCAAATTAGCAATTTATGGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134228931 83 + 135778131 CTTCATGTATTTTTCAAATTAGCAATTTATAGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659629 83 - 2847728 CTTCATGTATTTTTCAAATTAGCAATTTATGGTTTTTGAAATTGAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789853 83 + 2368649 CTTGATGTATTTTTCAAATTAGCAATTTATAGTTTTTGAAATTCAAAATAACATCCAATAGATGAACAGTATATCATGCCAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553379 83 - 190850796 CTTCATGTATTTTTCAGATTAGCAATTTATATTTTTTGAAATTGAAAATAACATACAATAGGTGAATAGCATGTAACACTAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043189 83 - 14256875 CTTCATGTATTTTTCAAATTAGCTATTTATATATTTTGAAATTGAAAATAATATACAATAGGCGAATAGCATGTAATGCTAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932362 83 - 2196201 CTTCATGTATTTTTCAAATTAGCTAATTATGTTTTTTGAAATTGGAAATAGCATACAATAGGTGAAGAGCATGTAGTGCTAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325373 83 - 5030052 cTTCATGTATTTTTCAAATTAGCAATTTATATTTTTTGAAGTTGAAAATAACGTACAATAGGTGAATAGCATGTAATGCTGGA i aotNan1.NW_018492112v1 I 119 C 0 s otoGar3.GL873580 11169445 82 - 11315646 CTTTATGTATTTTCCCAATCAGCAATTTATG-TTTTTGATATTGAAAATAAGAAGCAGTAGATAAATAGTATACTACTTTAGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16863174 82 - 59632846 CATGATATATTTTTGAAATTAGCAATTTATA-TTTTTGAAATTGAAAATAGCAAACAATAGGTAAATAGCATATCATGTTAGA i canFam3.chr16 C 0 I 929 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=12376.000000 s hg38.chr4_KI270789v1_alt 25540 1 + 205944 A s panTro5.chr4 192817766 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702376 1 + 195804263 A i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623908 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908825 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856268 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237659 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272644 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229014 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659712 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789936 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553462 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043272 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932445 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325456 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11169527 1 - 11315646 A i otoGar3.GL873580 C 0 I 2515 s canFam3.chr16 16864185 1 - 59632846 A i canFam3.chr16 I 929 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=117180.000000 s hg38.chr4_KI270789v1_alt 25541 12 + 205944 GCCTTGCTTTCA s panTro5.chr4 192817767 12 + 194502333 GCCTTGCTTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702377 12 + 195804263 GCCTTGCTTTCA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623909 12 + 115148730 GCCTTGCTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908826 12 + 190429646 GCCTTGCTTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856269 12 + 189454096 GCTTTGCTTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237660 12 - 25927173 GCCTTGCTTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272645 12 + 4669795 GCCTTGCTTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229015 12 + 135778131 GCCTTGCTTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659713 12 - 2847728 GCCTTGCTTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789937 12 + 2368649 GCCTTGCTTTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553463 12 - 190850796 GCTTTGCTTCCA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13043273 12 - 14256875 GCTTTGCTTTCA i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 932446 12 - 2196201 GCTTTGCTTTCA i cebCap1.NW_016107886v1 C 0 I 167 s aotNan1.NW_018492112v1 3325457 12 - 5030052 GCTTTGCTTTCA i aotNan1.NW_018492112v1 C 0 I 1 s canFam3.chr16 16864186 12 - 59632846 GAGTTCTTTTCA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169528 2515 - 11315646 I a score=12956.000000 s hg38.chr4_KI270789v1_alt 25553 3 + 205944 -------ATG s panTro5.chr4 192817779 3 + 194502333 -------ATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702389 3 + 195804263 -------ATG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623921 3 + 115148730 -------ATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908838 3 + 190429646 -------ACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856281 3 + 189454096 -------ACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237672 3 - 25927173 -------ACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272657 3 + 4669795 -------ACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229027 3 + 135778131 -------ACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659725 3 - 2847728 -------ACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789949 3 + 2368649 -------ACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553476 3 - 190850796 -------ACA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13043286 3 - 14256875 -------ACA i saiBol1.JH378165 I 1 C 0 s aotNan1.NW_018492112v1 3325470 3 - 5030052 -------ACA i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 16864198 10 - 59632846 GTTGATTAGA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I e otoGar3.GL873580 11169528 2515 - 11315646 I a score=142458.000000 s hg38.chr4_KI270789v1_alt 25556 15 + 205944 CATTTGCATTTGCTT s panTro5.chr4 192817782 15 + 194502333 CATTTGCATTTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702392 15 + 195804263 CATTTGCATTTGCTT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623924 15 + 115148730 CATTTGCATTTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908841 15 + 190429646 CATTTGCATTTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856284 15 + 189454096 CATTTGCATTTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237675 15 - 25927173 CATTTGCATTTGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272660 15 + 4669795 CATTTGCATTTGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229030 15 + 135778131 CATTTGCATTTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659728 15 - 2847728 CATTTGCATTTGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789952 15 + 2368649 CATTTGCATTTGCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553479 15 - 190850796 CATCTGCATTTGCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043289 15 - 14256875 CATCTGCATTTGCTT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3325473 15 - 5030052 CAGCTGCATTTGCCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172043 15 - 11315646 CATAAGCCTTTGCTT i otoGar3.GL873580 I 2515 C 0 s canFam3.chr16 16864208 15 - 59632846 CATTTGAGTTTGCTG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e dasNov3.JH570353 1355498 1280 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=581662.000000 s hg38.chr4_KI270789v1_alt 25571 92 + 205944 T--ATCATCGTCTCTT---CTGAT-ATCAAGCCTGAGATTTCTCACTCTGAAA-ATAATTTTATCTCTCGTCAATCTTGTTATCTCAGCTACATCTCTT s panTro5.chr4 192817797 92 + 194502333 T--ATCATCGTCTCTT---CTGAT-ATCAAGCCTGAGATTTCTCACTCTGAAA-ATAATTTTATCTCTTGTCAATCTTGTTATCTCAGCTACATCTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702407 92 + 195804263 T--ATCATCGTCTCTT---CTGAT-ATCAAGCCTGAGATTTCTCACTCTGAAA-ATAATTTTATCTCTTGTCAATCTTGTTATCTCAGCTACATCTCTT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112623939 95 + 115148730 T--ATCACCGTCTCTTCTCCTGAT-ATCAAGCCTGACATTTCTTACTCTGAAA-ATAATTTTCTCTCTTGTCAATCTTGTTAACTCAGCTACACCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908856 96 + 190429646 TAGATCATCGTTTCTTCTCCTGATAATCAAGCCTGACATTTTTTACTGTGAAA-ATAATTT--TCTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856299 96 + 189454096 TAGATCATCGTTTCTTCTCCTGATAATCAAGCCTGACATTTCTTACTGTGAAA-ATAATTT--TCTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237690 96 - 25927173 TAGATCATCGTTTCTTCTCCTGATAATCAAGCCTGACATTTCTTACTGTGAAA-ATAATTT--TCTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272675 95 + 4669795 TAGATCATCGTTTCTTCTCCTGAT-ATCAAGCCTGACATTTCTTACTGTGAAA-ATAATTT--TCTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229045 95 + 135778131 TAGATCATTGTTTCTTCTCCTGAT-ATCAAGCCTGACATTTCTTACTCTGAAA-ATAATTT--TTTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659743 95 - 2847728 TAGATCATCATTTCTTCTCCTGAT-ACCAAGCCTGATATTTCTTACTGTGAAA-ATAATTT--TCTCTCATCAATCTTGTTATCTCAGCTACATCTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 789967 90 + 2368649 TAGATCATCGTTTCTTCTCCTGGT-ATCAAGCCTGACATTTCTTACTCTGAAA-ATAATTT--TCTCTCATCAATCTTGTT-----AGCTACATCTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553494 94 - 190850796 TAGATCA---CATTTTCTCCTGAT-GTCAAGCCCGACGTTTCTCATTCCGAAA-ATGCGTTTCTCTCTTGTCCCTCTTGTGATCTCAGCTGCATGTCTT i calJac3.chr3 C 0 I 15 s saiBol1.JH378165 13043304 75 - 14256875 TAGATCA---TGTCTTCTCCTGAT-ACCAAGCCCAACGTTTCTTTTTCTGAAA-ATAAATTTCTCTCTTGTCCATCTTGT------------------- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3325488 94 - 5030052 TAGATCA---TGTTTTCTCCTGAT-ATCAAGCCCGACATTTCTTATTCTGAAA-ATAAATTTCTCTCTTGTCCATCTCATGATCTCAGCTACATCTCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172058 69 - 11315646 TAACTCATACTTCCCT---CTGCC-ACCAATCCTGATGTTCCTTACTTGGGAA-AAAC-----TCTCTTA--------------------GCATGTTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864223 90 - 59632846 TAACT-----TTTATTCCTTTGTG-AATATGCTTGACATTTCCTAC-CTGAAA-AAAATGTTCTCTCATGTTAGTCTTGTGACCTCATCTA-ATCTCTC i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1356778 87 - 2520184 ----TGTTGTTTTCTTTTCTTGTC-ATCAAGCCTGGCATTTCTTGCTTTGAAACAAAACTTTCTCCCTTGTTACTCATGTGACTTTGGCTCT------- i dasNov3.JH570353 I 1280 C 0 e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=255.000000 s hg38.chr4_KI270789v1_alt 25663 1 + 205944 -A s panTro5.chr4 192817889 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702499 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112624034 1 + 115148730 -A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908952 1 + 190429646 -A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856395 1 + 189454096 -A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237786 1 - 25927173 -A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272770 1 + 4669795 -A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229140 1 + 135778131 -A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659838 1 - 2847728 -A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790057 1 + 2368649 -A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13043379 1 - 14256875 -G i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3325582 1 - 5030052 -A i aotNan1.NW_018492112v1 C 0 I 19 s otoGar3.GL873580 11172127 1 - 11315646 -A i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1356865 1 - 2520184 T- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189553588 15 - 190850796 I e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e canFam3.chr16 16864313 2 - 59632846 I e mm10.chr8 86505395 1687 - 129401213 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=579281.000000 s hg38.chr4_KI270789v1_alt 25664 118 + 205944 ATGTTGATTACACCCAAATCCATGCTTACTGAACACAGTCAGATGTTCtaagtgagctaacatgtgtaaggcatttaatagttgccctggtacttactaagtgacatgaaatttttgg s panTro5.chr4 192817890 118 + 194502333 ATGTTGATTACACCCAAATCCATGCTTACTGAACACAGTCATATGTTCtaagtgagctaacatgtgtaaggcatttaatagttggcctggtacttactaagtgacatgaaatttttgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702500 118 + 195804263 ATGTTGATTACACCCAAATCCATGCTTACTGAACACAGTCATATGTTCtaagtgagctaacatgtgtaaggcatttaatagttggcctggtacttactaagtgacatgaaatttttgg i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112624035 118 + 115148730 ATGTTGATTACACCCAAATCCATGCTTACTGAACACAGTTATATGTTCtaagtgagctaatatgtgtaaggcatttaacagtgggcctggtacttactaagtgACATGACGTTTTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188908953 118 + 190429646 ATGTTGATTACAACCAAATCCATGTTTACTGAACTCAGTCATATGTTCtaagtgagctaataagtgaaaggcatttaatagttggcttggtacatactaactgatatgaaaatttcag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856396 118 + 189454096 ATGTTGATTACAACCAAATCCATGTTTACTGAACTCAGTCATATGTTCTAAGTGAGCTAATAAGTGAAAGGCATTTAATAGTTGGCTTGGTACATACTAACTGATATGAAAATTTCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237787 118 - 25927173 ATGTTGATTACAACCAAATCCATGTTTACTGAACTCAGTCATATGTTCtaagtgagctaataagtgaaaggcatttaatagttggcttggtacatactaactgatatgaaaatttcag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272771 118 + 4669795 ATGTTGATTACAACCAAATCCATGTTTACCGAACTCAGTCATATGTTCTAAGTGAGCTAATAAGTGAAAGGCATTTAATAGTTGGCTTGGTACATACTAACGGATATGAAAATTTCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229141 118 + 135778131 ATGTTCATTACAACCAAATCCATGCTTACTGAACTCAGTCATACATTCTAAGTGAGCTAATAAGTGTAAGGCATTTAATAGTTGGCTTGGTACATACTAAGTGATATGAAAATTTCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659839 118 - 2847728 ATGTTGATTACAACCAAATCCATGTTTACTGAACTCAGTCATATGTTCtaagtgagctaataagtgaaaggcatttaatagttggcttggtacatactaactgatatgaaaatttcag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790058 118 + 2368649 ATGTTGATTACAACCAAATCCATGCTTACTGAACTCAGTCATATGTTCtaagtgagctaataagtgtaaggcatttaatagttggcctggtacatactaagtgacatgaaaattttgg i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13043380 24 - 14256875 -------------------------------ATCTCAGCTACATCTGTTA-----------------------------------CCTGG---------------------------- i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11172128 92 - 11315646 -AGTTAATTGCACCCAACTCCATACCTACCAAACTCAGGTGTATGTTCTAAGTGAGTTAAT--GTATAATGTAT----------------AACATGCAAA-------GGTATTTTTGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864315 103 - 59632846 GTGTAGATGACATCCAAATCCATATCCATTGCATTAAGTCGCATGTTCt----gagttattgtaagtaagacatttagaacatggcttggcac-----------TGTAAAGTTTTTGG i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1356866 116 - 2520184 GTGTTGAGTCCACCCAGATCCACCCCT-CTGAACTTATTCACACGTTTTGCCTGAGTTATGATTACTGAAGCAT-TAGTGTACGGCCTGAACCACGTTAAGTGCCATACAATTGTTAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189553588 15 - 190850796 I e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325583 19 - 5030052 I e gorGor5.CYUI01015356v1 3738422 25 + 4876863 I a score=59358.000000 s hg38.chr4_KI270789v1_alt 25782 8 + 205944 ctattact s panTro5.chr4 192818008 8 + 194502333 ctattact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702618 8 + 195804263 ctattact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738447 8 + 4876863 ctattact i gorGor5.CYUI01015356v1 I 25 C 0 s nomLeu3.chr7b 112624153 8 + 115148730 CTGttact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909071 8 + 190429646 ctattact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856514 8 + 189454096 Ctattact i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237905 8 - 25927173 ctattact i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272889 8 + 4669795 Ctattact i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229259 8 + 135778131 Ctattact i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659957 8 - 2847728 ctattact i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790176 8 + 2368649 ctattact i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13043404 8 - 14256875 ttactatt i saiBol1.JH378165 C 0 I 1 s otoGar3.GL873580 11172220 8 - 11315646 TTATCATT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864418 8 - 59632846 ttattact i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1356982 5 - 2520184 CTGGT--- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189553588 15 - 190850796 I e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325583 19 - 5030052 I a score=13826.000000 s hg38.chr4_KI270789v1_alt 25790 5 + 205944 ATTAC s panTro5.chr4 192818016 5 + 194502333 ATTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702626 5 + 195804263 ATTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738455 5 + 4876863 attac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624161 4 + 115148730 atta- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909079 5 + 190429646 GTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856522 5 + 189454096 gttac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237913 5 - 25927173 GTTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272897 5 + 4669795 gttac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229267 5 + 135778131 gTTAc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659965 5 - 2847728 GTTAc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790184 5 + 2368649 ATTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553603 5 - 190850796 ATTCT i calJac3.chr3 I 15 C 0 s saiBol1.JH378165 13043413 5 - 14256875 atttt i saiBol1.JH378165 I 1 C 0 s otoGar3.GL873580 11172228 4 - 11315646 ATTT- i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16864426 4 - 59632846 atta- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1356987 3 - 2520184 -TTA- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I e aotNan1.NW_018492112v1 3325583 19 - 5030052 I a score=161282.000000 s hg38.chr4_KI270789v1_alt 25795 35 + 205944 atcatcatcatcattatcat-tactat----tattat--cat s panTro5.chr4 192818021 35 + 194502333 atcatcatcatcattatcat-tactat----tattat--cat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702631 35 + 195804263 atcatcatcatcattatcat-tactat----tattat--cat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738460 35 + 4876863 atcatcatcatcattatcat-tactat----tattat--cat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624165 30 + 115148730 -----catcatcattatcat-tactat----tattat--cat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909084 26 + 190429646 atcatcatcaatatcat--------------tattat--cat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856527 26 + 189454096 atcatcatcaatatcat--------------tattat--cat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237918 26 - 25927173 atcatcatcaatatcat--------------tattat--tat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272902 34 + 4669795 atcaccatcatcattatcat-tatta-----tattat--cat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229272 23 + 135778131 atcatcatcatcattat--------------cattat----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659970 28 - 2847728 atcatcatcatcattat--------------cattattatat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790189 34 + 2368649 ATCGTCATCATCATTAACAT-TATTA-----TATTGT--CAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553608 35 - 190850796 GTCATCATCGCCGTTCTCAT-TACTGC----TATTAC--CGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043418 35 - 14256875 atcatcatcgccattctcat-tactac----tattat--cat i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3325602 35 - 5030052 ATCATCATCGCCGTTCTCAT-TACTAC----TATTAT--TGT i aotNan1.NW_018492112v1 I 19 C 0 s otoGar3.GL873580 11172234 37 - 11315646 ATCATCTTCATCATTACTACATACTACACCATATTAT----- i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16864430 28 - 59632846 ----tcatcatcattatcac-ttttat----tactgt----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1356990 32 - 2520184 ATCAATATTCTTATTATTAC-TACTGT----TTTTAT----- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 932458 167 - 2196201 I e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=252867.000000 s hg38.chr4_KI270789v1_alt 25830 25 + 205944 tat-----tcttatgtttctattaGGTTGC s panTro5.chr4 192818056 25 + 194502333 tat-----tcttGTGTTTCTATTAGGTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702666 25 + 195804263 tat-----tcttatgtttctattaGGTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738495 25 + 4876863 tat-----tcttatgtttctattaGGTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624195 25 + 115148730 tat-----tcttatgtttctattaGGTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909110 25 + 190429646 tat-----tcttatgtttctattaGGTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856553 25 + 189454096 tat-----tcttatgtttctattaGGTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237944 25 - 25927173 tat-----tcttatgtttctattaGGTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272936 25 + 4669795 tat-----tcttatgtttctattaGGTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229295 22 + 135778131 --------tcttatgtttctattaGGTTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2659998 30 - 2847728 tatcattatcttatgtttctattaGGTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790223 25 + 2368649 TAT-----TCTTATGTTTCTATTAGGTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553643 25 - 190850796 AAT-----TCTCATGTCTTTACTAGGCTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043453 25 - 14256875 aat-----tcttatGTCTTCATTAGGTTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932625 25 - 2196201 TAT-----TCTCATGTCTTTATTAGGCTGC i cebCap1.NW_016107886v1 I 167 C 0 s aotNan1.NW_018492112v1 3325637 25 - 5030052 AAT-----TCTTATGTCTTTATTAGGTTGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172271 16 - 11315646 TAT-----GGTTATTTCTCTA--------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864458 19 - 59632846 -----------tatATCTCCAGTAGGTTGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357022 19 - 2520184 --------TGTTCTGTCTCTA---GGTTGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17461846 195 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=331279.000000 s hg38.chr4_KI270789v1_alt 25855 25 + 205944 CTCAGAGCAAATCAAATGCATATAA s panTro5.chr4 192818081 25 + 194502333 CTCAGAGCAAATCAAATGCATATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702691 25 + 195804263 CTCAGAGCAAATCAAATGCATATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738520 25 + 4876863 CTCAGAGCAAATCAAATGCATATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624220 25 + 115148730 CTCAGAGTGAATCAAATGCATATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909135 25 + 190429646 CTCAGAGTAAATCAAAATCATATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856578 25 + 189454096 CTCAGAGTAAATCAAAATCATATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237969 25 - 25927173 CTCAGAGTAAATCAAAATCATATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272961 25 + 4669795 CTCAGAGTAAATCAAAATCATATAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229317 25 + 135778131 CTCAGAGTAAATCAAAATCATATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660028 25 - 2847728 CTCAGAGTAAATCAAAATCATGTAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790248 25 + 2368649 CTCAGAGTAAATCAAAAGCATATAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553668 25 - 190850796 CTCCGAGCAAATCAAATGCGTGCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043478 25 - 14256875 CTCAGAGCAAATCAAATGCTTATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932650 25 - 2196201 CTCAGAGCAAATCAAATGCTTATCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325662 25 - 5030052 CTCAGAGCAAATCAAATGCGTATAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17462041 25 - 93316391 CTCAGAGCAAATCGAATGCATATAA i micMur3.chr14 I 195 I 85 s otoGar3.GL873580 11172287 18 - 11315646 -------CAAATCAAACGTGTATAA i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16864477 25 - 59632846 CTCAGAGCAAAACAAATGCATATAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357041 25 - 2520184 CTTAGAGCAAATCAAACACATATGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e mm10.chr8 86505395 1687 - 129401213 I a score=221588.000000 s hg38.chr4_KI270789v1_alt 25880 30 + 205944 CCAAATGTTTTAATCCTTATGTGT-ATGT-TT s panTro5.chr4 192818106 30 + 194502333 CCAAATGTTTTAATCCTTATGTGT-ATGT-TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702716 30 + 195804263 CCAAATGTTTTAATCCTTATGTGT-ATGT-TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738545 30 + 4876863 CCAAATGTTTTAATCCTTATGTGT-ATGT-TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624245 30 + 115148730 CCAAATGTTTTAATCCTTATGTGT-ATGT-TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909160 30 + 190429646 CCAAATGTTTCAATCCTTATGTGT-ATGT-TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856603 30 + 189454096 CCAAATGTTTCAATCCTTATGTGT-ATGT-TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24237994 30 - 25927173 CCAAATGTTTCAATCCTTATGTGT-ATGT-TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3272986 29 + 4669795 CCAAATGTTTCAATCCTTATGT-T-ATGT-TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229342 30 + 135778131 CCAAATGCTTCAATCCTTATGTGT-ATGT-TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660053 30 - 2847728 CCAAATGTTTCAATCCTTATGTGT-ATGT-TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790273 30 + 2368649 CCAAATGTTTCAATCCTTATGTGT-ATGT-TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553693 30 - 190850796 CCCGC-ATTTTTATCCTTCTGTGT-GTATGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043503 30 - 14256875 CACCA-ATTTTTCTCCTTATGTGT-CTACGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932675 30 - 2196201 CCCCA-ATTTTTTTCCTTATGTGT-GTATGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325687 30 - 5030052 CCCAA-ATTTTTATCCTTGCGTGT-ATATGTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172306 30 - 11315646 TCACATCTTTCCATTGTCCTGTGT-GTGT-GT i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16864502 29 - 59632846 TCAAACCTTTTCATCCTCCTGTGTAATGT--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357066 26 - 2520184 CCAAATGTTCTGATCCTCTTCTGT-CT----- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3883461 175 + 3993831 I e micMur3.chr14 17462066 85 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=473531.000000 s hg38.chr4_KI270789v1_alt 25910 38 + 205944 TTTAATGTAAATTCATAGTTTCCACTCTCAAACTTGTC s panTro5.chr4 192818136 38 + 194502333 TTTAATGTAAATTCATAGTTTCCACTCTCAAACTTGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702746 38 + 195804263 TTTAATGTAAATTCATAGTTTCCACTCTCAAACTTGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738575 38 + 4876863 TTTAATGTAAATTCATAGTTTCCACTCTCAAACTTGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624275 38 + 115148730 TTTAATGTAAATTTATAGTTTCCACTCTCAAACTTGTC i nomLeu3.chr7b C 0 I 3 s rheMac8.chr5 188909190 38 + 190429646 TTAAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856633 38 + 189454096 TTAAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238024 38 - 25927173 TTTAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273015 38 + 4669795 TTTAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229372 38 + 135778131 TTTAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660083 38 - 2847728 TTTAATGTAAATTCATAGTTCCCACTCTCATACTTGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790303 37 + 2368649 TT-AATGTAAATTCATAGTTCCCACTCTCATACTTGTC i colAng1.NW_012116221v1 C 0 I 112 s calJac3.chr3 189553723 38 - 190850796 TTTCACGTAAATTCCTAGTGTTCCCTCTCCGACTTGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043533 38 - 14256875 TTTAACGTAAATTCATAGTTTTCACTCTCAGACTTGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932705 38 - 2196201 TTTAACATAAATTCATAGTTTTCACTCTCAGACTTGTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325717 38 - 5030052 TTTAACGTAAATTCATAGTTTTCACTCTCAGACTTGTC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883636 38 + 3993831 TTTAATGTAAATTCATAGCTTTCACTCTGAAACTTATC i proCoq1.NW_012145301v1 I 175 I 3 s otoGar3.GL873580 11172336 35 - 11315646 -TTAATGCAGATTC--AGTTTTTACTCTTAAACTTATC i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16864531 37 - 59632846 TTTAATGTAGA-TAGTAGCTTTAACTCTAAAATTTATC i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1357092 38 - 2520184 TTAAATGTAGACGAGCAGCTTGAATCCTAAAACTTACC i dasNov3.JH570353 C 0 I 3 e micMur3.chr14 17462066 85 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=150736.000000 s hg38.chr4_KI270789v1_alt 25948 15 + 205944 CTTCTTCC---TTTTATG s panTro5.chr4 192818174 15 + 194502333 CTTCTTCC---TTTTATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702784 15 + 195804263 CTTCTTCC---TTTTATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738613 15 + 4876863 CTTCTTCC---TTTTATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624316 15 + 115148730 CTTCTTCC---TTTTATG i nomLeu3.chr7b I 3 C 0 s rheMac8.chr5 188909228 15 + 190429646 ATTCTTCC---TTTTATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856671 15 + 189454096 ATTCTTCC---TTTTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238062 15 - 25927173 ATTCTTCC---TTTTATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273053 15 + 4669795 ATTCTTCC---TTTTATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229410 15 + 135778131 ATTCTTCC---TTTTATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660121 15 - 2847728 ATTCTTCC---TTTTATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790452 15 + 2368649 CTTCTCCC---TTTTATG i colAng1.NW_012116221v1 I 112 C 0 s calJac3.chr3 189553761 18 - 190850796 ATTCTTCCTTGTTCGATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043571 18 - 14256875 ATTCTTCCTTGTTTTATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932743 18 - 2196201 ATTCTTCCTTGTTTTATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325755 18 - 5030052 CTTCTTCCTTGTTTTATG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883677 15 + 3993831 CTTCTTTC---TTTTATT i proCoq1.NW_012145301v1 I 3 C 0 s otoGar3.GL873580 11172374 15 - 11315646 CTTCTTTT---TTTCACT i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16864571 15 - 59632846 CTCATTTC---CCTTATT i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1357133 15 - 2520184 CTTCTTTCCCCTTTT--- i dasNov3.JH570353 I 3 C 0 e micMur3.chr14 17462066 85 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=843334.000000 s hg38.chr4_KI270789v1_alt 25963 64 + 205944 CTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC s panTro5.chr4 192818189 64 + 194502333 CTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702799 64 + 195804263 CTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738628 64 + 4876863 CTCTGCATTGAACCACCGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624331 64 + 115148730 CTCTGCATTGAACCACCGTTAATTTCTTACCCACCTCT--GTTACATCTCTCGTATTCATTTTCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909243 64 + 190429646 CTCTGCATTGAACCACCGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856686 64 + 189454096 CTCTGCATTGAACCACCGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238077 64 - 25927173 CTCTGCATTGAACCACCGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273068 64 + 4669795 TTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229425 64 + 135778131 TTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660136 64 - 2847728 CTCTGCATTGAGCCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790467 64 + 2368649 CTCTGCATTGAACCACTGTTAATTTCTTACCAACCTCT--GTTACATCTCTTGTATTCATTTTCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553779 63 - 190850796 CTCTGCATTGAATCACTGTTAATTTCTCACTGACGTCT--GCCACATCCCG-GTATTTATTTTCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043589 63 - 14256875 CTCTGCATTGAATCACTGTGAATTTCTCACTAGCTCCT--GCTACATCTTA-GTTTTCGTTTTCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932761 63 - 2196201 CTCTGCATCGAATCACTGTGAATTTCCCACTAACTCCT--GCTACATCTTG-CTATTTGTTTTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325773 63 - 5030052 ATCTGCATTGAATCACTGTTAATTTCTCACTAACTCCT--GCTACATCTCT-GTATTCGTTTTCTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17462151 66 - 93316391 CTCTGCATTGAATCACTGTTAATTTCTTACCAACCTCTCCATCAAATCTCTTGCATTCATTTTCTC i micMur3.chr14 I 85 I 83 s proCoq1.NW_012145301v1 3883692 66 + 3993831 CTCTGCATTGAATCACTGCTAATTTCTTACCAACCTCTCTGTCAAATCTCTCGCATTCATTTTCTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11172389 64 - 11315646 CTCTGCATTGAATCGCTGTTCATTTCCTGCCATCCTCT--GCCAAATCTCTTGCGTTCATTTTCTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864586 58 - 59632846 CTCAGTATTAAATCACTATTGTTT-----AAGACTTCT--GTCATCTGTTTTTTTTTTTTTTTTC- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357148 55 - 2520184 CTC--------GTCACTGCCAATTGTTCAGCAGGCTCT--GCCAATTCTCTTACATCCACTTTCC- i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86505395 1687 - 129401213 I a score=977082.000000 s hg38.chr4_KI270789v1_alt 26027 85 + 205944 TTCTCCACGTAGATCCTGTTGACTTTGG-CTT-AC--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAA s panTro5.chr4 192818253 85 + 194502333 TTCTCCACGTAGATCCCGTTGACTTTGG-CTT-AC--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702863 85 + 195804263 TTCTCCACGTAGATCCCATTGACTTTGG-CTT-AC--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738692 85 + 4876863 TTCTCCATGTAGATCCCGTTGACTTTGG-CTT-AC--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624395 84 + 115148730 TTCTCCCTGTAGCTCCCATTGACTTTGG-TTT-AA--AC--TCATTT-ACTTCACTGCGATTCTTCTCTAGATGCTGAACTTTTTCTTCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909307 85 + 190429646 TTCTCCATGTGGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856750 85 + 189454096 TTCTCCATGTGGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238141 85 - 25927173 TTCTCCATGTGGATCCCATTGACTTTGG-TTT-AA--AT--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273132 85 + 4669795 TTCTCCATGTAGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229489 85 + 135778131 TTCTCCATGTAGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660200 85 - 2847728 TTCTCCATGTAGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790531 85 + 2368649 TTCTCCATGTAGATCCCATTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGATTCTTCTCTAGATGCTCAACTTTTTCTTCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553842 85 - 190850796 TTTGCCGTGGTGATACCATTGACGTTGG-TAT-AA--AC--TGGTTTCATTTCACTGGGCTTTTTCTCTAGATGCTCAACTTTTTAATCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043652 85 - 14256875 CTTGCCATGTAGATACCACTGACTTTGG-TTT-AA--AC--TCATTTTATTTCACTGGGCTTTTTCTGTAGATGCTCAACTTTTTCTTCAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932824 85 - 2196201 CTTGTGATGTAGATGCCACTGACTTTGG-TTT-AA--GC--TCATTTCATTTCACTGGGCTTTTTCTCTAGATGCTCAACTTTTTCGTCAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325836 85 - 5030052 TTTGCCATGTAGATGCCACTGACTTTGG-TTT-AA--AC--TCATTTCATTTCACTGGGCTTTTTCTCTAGATGCTCAACTTTTTCTTCAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3883758 85 + 3993831 TTCTCTGTGTGGATCACATTTACTTTGC-TTT-AA--ACACTCATTTCATTTCACCGTGATTCTGCCGCAGA--CTCAGCTTTCTCTCTGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11172453 86 - 11315646 TTCTCCAAGTAGACCACATTTACATCACATTT-AG--ACATTCATTTCATTTCATGGTGATTCTGCTGTAGA--CTCCACTTTCTCTCTGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864644 86 - 59632846 CTCTCTGTGTATACCATGTTTGTCTTGG-TTT-AAATAC--TAATTTTATTTCTCGTGGATTCTGCTGTCGGT-CTTAATTTTTTCTGTGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357203 79 - 2520184 CTCTCCACGTCGACCCCATTGACCTTGG-TTTCAT--GC--TCATTTCCTTTCACGTGCATTCTGTGCTAGACTCTGTGCTGTC------- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17462217 83 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=539832.000000 s hg38.chr4_KI270789v1_alt 26112 39 + 205944 ACTATA-ATTCATCTTATCTGTGGTAATCAGTTTATTTTT------ s panTro5.chr4 192818338 39 + 194502333 ACTATA-ATTCATCTTATCTGTGGTAATCAGTTTATTTTT------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702948 39 + 195804263 ACTATA-ATTCATCTTATCTGTGGTAATCAGTTTATTTTT------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738777 39 + 4876863 ACTATA-ATTCATCTTATCTGTGGTAATCAGTTTATTTTT------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624479 39 + 115148730 ACTCTA-ATTCATCTTATCTGTGGTAACCCGTTTATTTTT------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909392 39 + 190429646 ACTATA-ATTCATCTTATCTGTGGCAACCAGTTTATTTTT------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856835 39 + 189454096 ACTATA-ATTCATCTTATCTGTGGCAACCAGTTTATTTTT------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238226 39 - 25927173 ATTATA-ATTCATCTTATCTGTGGCAACCAGTTTATTTTT------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273217 39 + 4669795 ACTATA-ATTCATCTTATCTGTGGTAACCAGTTTATTTTT------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229574 39 + 135778131 ACTGTA-ATTCATCTTATCTGTGGTAACCAGCTTAGTTTT------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660285 39 - 2847728 ACTATA-ATTCATCTTATCTGTGGTAACCAGTTTATTTTT------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790616 39 + 2368649 ACTATA-ATTCATCTTATCTGTGGTAACCAGTTTATTTTT------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553927 39 - 190850796 GCCGTA-ATTCATCTTATCTATGGTAACCAGTTCATTTTT------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043737 39 - 14256875 GCTGTA-ATTCATCTTATCTAGAGTAACCAGTTCATTTTT------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932909 38 - 2196201 GCTAT--ATTCAACTTATCTAGGGTAACCAGTTCATTTTT------ i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325921 35 - 5030052 GCTGTA-ATTCACCCTATCTATGGTAACCAGTTCA----T------ i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17462300 39 - 93316391 ACTATA-ATTCATCCTATCTGTGATAATCAGCTTACTTTT------ i micMur3.chr14 I 83 I 908 s proCoq1.NW_012145301v1 3883843 39 + 3993831 GCTATA-ATTCATCTTATCTGTGGTAATCAGCTTATTTTT------ i proCoq1.NW_012145301v1 C 0 I 363 s otoGar3.GL873580 11172539 39 - 11315646 ACTATA-ATTCATCTTATCTGTGGTGATCAGCTCATTTTT------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864730 40 - 59632846 CCTAGACAtttattttatgtacagtaactggataattttt------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357282 44 - 2520184 -CTGTA-TTTCACCTTACATATCGTAACCAATTTGTTTTATTATTT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86505395 1687 - 129401213 I a score=2394596.000000 s hg38.chr4_KI270789v1_alt 26151 254 + 205944 TAAAGCA-----TAGTTCTGTTTACAAGA-----C-----TTCTCACAAGCTTC---CAA---GTCTCTA---TTGCCTGTTG---AATAAAGTTCA-----CCGTCCTTCATGTGACACTGAAGGTGTTCAGTCTTCCGCTTTCAGATAATGTTTCT-GGTGCAGTCACCTGCCATTTTCTTTCACACCTCCTAGAGTGCAACGGATCTGCATAGTATTTAATGCTCC-TCATTC---AATGACTATGTAGTGA-AGTGTTCCTGGAAGCCTGGTTCTAGTTTAAGTGTCT s panTro5.chr4 192818377 251 + 194502333 TAAAGCA-----TAGTTCTGTTTACATGA-----C-----TTCTCACAAGCTTC---CAA---GTCTCTA---TTACCTGTTG---AATAAAGTTCA-----CCGTCCTTCATGTGACACTGAAGGCGTTCAGTCTCCCGCTTTCAGATAATGTTTCT-GGTGCGGTCACCTGCCATTTTCTTTCACACCT---AGAGTGCAACGGATCTGCATAGTATTTAATGCTCC-TCATTC---AATGACTATGTAGTGA-AGTGTTCCTGGAAGCCTGGTTCTAGTTTAAGTGTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192702987 251 + 195804263 TAAAGCA-----TAGTTCTGTTTACATGA-----C-----TTCTCACAAGCTTC---CAA---GTCTCTA---TTACCTGTTG---AATAAAGTTCA-----CCGTCCTTCATGTGACACTGAAGGCGTTCAGTCTCCCGCTTTCAGATAATGTTTCT-GGTGCGGTCACCTGCCATTTTCTTTCACACCT---AGAGTGCAACGGATCTGCATAGTATTTAATGCTTC-TCATTC---AATGACTATGTAGTGA-AGTGTTCCTGGAAGCCTGGTTCTAGTTTAAGTGTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3738816 254 + 4876863 TAAAGCA-----TAGTTCTGTTTACACGA-----C-----TTCTCACAAGCTTC---CAA---GTCTCTA---TTGCCTGTTG---AATAAAGTTCA-----CCGTCCTTCATGTGACACTGAAGGCGTTCAGTCTCCTGCTTTCAGATAATGTTTCT-GGTGCGGTCACCTGCCATTTTATTTCACACCTCCTAGAGTGCAACGGATCTACATAGTATTTAATGCTCC-TCATTC---AATGACTATGTAGTGA-AGTGTTCCTGGAAGCCTGGTTCTAGTTTAAGTGTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624518 231 + 115148730 TAAAGCA-----TAGTTCTGTTTACACGA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCGTTG---AATAAAGTTCA-----CCGTCCTTCATGTGACACTGAA-----------------------ATAGTGTTCCT-GGTGCGGTCACCTGCCATTTTCTTTCACGCCTCCTAGAGTGCGACGGATCTGCATAGTATTTAACGCTCCTTCATTC---AATGACTACGTAGTGA-AGTGTTCCTGGAAGCCT-GTTCCAGTTTAAGTGTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909431 255 + 190429646 TAAAGCA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTTCTGCTTTCAGATAATGTTTCC-GGCGTGGTCACCTGCCATTTTCTTTCACACCTCCTAGAGTGTAAAGGATCTGCATAGTACTTAATGCTCTTTCACTC---AGTGACTCTGTAATGA-AGTGTTCCTGGAAGGCTGGTTCTAGTTTAAGTGTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187856874 255 + 189454096 TAAAGCA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTTCTGCTTTCAGATAATGTTTCC-GGCGTGGTCACCTGCCATTTTCTTTCACACCTCCTAGAGTGTAAAGGATCTGCATAGTACTTAATGCTCTTTCATTC---AGTGACTCTGTAATGA-AGTGTTCCTGGAAGGCTGGTTCTAGTTTAAGTGTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238265 255 - 25927173 TAAAACA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCACTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTTCTGCTTTCAGATAATGTTTCC-GGCGTGGTCACCTGCCATTTTCTTTCACACCTCCTAGAGTGTAAAGGATCTGCATAGTACTTAATGCTCTTTCATTC---AGTGACTCTGTAATGA-AGTGTTCCTGGAAGGCTGGTTCTAGTTTAAGTGTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273256 255 + 4669795 TAAAGCA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTTCTGCTTTCAGATAATGTTTCC-GGCGCGGTCACCTGCCGTTTTCTTTCACACCTCCTAGAGTGTAAAGGATCTGCATAGTACTTAATGCTCTTTCATTC---AGTGACTCTGTAATAA-AGTGTTCCTGGAAGGCTGGTTCTAGTTTAAGTGTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229613 255 + 135778131 TAAAGCA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TCGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTGCTGCTTTCAGATAATGTTTCC-GGTGCGGTCACCTGCCATTTTCTTTCACACCACCTAGAGTGTAAAGGATCTGCATAGTACTTAATGCTCTTTCATTC---AGTGACTCTGTAATGA-AGTGTTCCTGGAAGGCTGGTTCCAGTTTAAGTGTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660324 255 - 2847728 TAAAGCA-----TCGTTCTGTTTACACAA-----C-----TTCTCACAAGCTTC---CAA---GTCCCCA---TTGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGAACCTCAGTCTTCTGCTTTCAGATAATGTTTCC-GGCACGGTCACCTGCCGTTTTCTTTCACACCTCCTGGAGTGTAAAGGATCTGCATAGTACTTAGTGCTCTTTCATTC---AGTGACTCTGTAATGA-AGTGTTCGTGGAAGGCTGGTTCTAGTTTAAGTGTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790655 255 + 2368649 TAAAGCA-----TTGTTCCGTTTACACAA-----C-----TTCTCACAAGTTTC---CAA---GTTCCCA---TTGCCCGCTG---AATGAAGTTCA-----CAGTCCTTCATGTGACACTGAAGACCCCCAGTCTTCTGCTTTCAGATAATGTTTCT-GGTGCGGTCACCTGCCATTTTCTTTCACACCTCCTAGAGTGCAAAGGATCTGCATGGTACTTAATGCTCTTTCCTTC---AATGACTCTGTAGTGA-AGTGTTCCTGGAAGGCTGGTTCTAGTTTAAGCGTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189553966 253 - 190850796 TAAAGCA-----TAGTTCTGTTTACACGA-----C-----TTCTCGCAAGCTTC---CAA---GTCCCCA---TTGCCTGCTG---AGTGAAGGTCA-----CAGTCCTTCACGTGACGCTGAAGACGCTCAGTCTTCTGCTTTCAGAGGATGTCTTT-GGCG-GGTCACCTGCCATTCTCCTTCACCCCTTCTCG-GTGCACCTGACCTGCACAGGACTGGATGCCCCCTCACTC---AGCGA-TATCCAGTGATAGTCTTCCTGTAAGGCTGAGTCTATTTTCAGTGTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13043776 253 - 14256875 TAAGGCA-----TAGTTCTGTTTACACGA-----C-----TTCTTGAAAGCTTC---CAA---ATCCCCA---TTGCCTGCTG---AGTGAAGTCCA-----CAGTCCTTCACGTGACGCTGAAGACGCC--GTCTTCGGCTAGCAGGTAACGTCTCTGGGGG-GGTCACCTGCCATTTTCCTTCACCCCTCCTAGAGTGCAGCTGACCTGCATAGGATTGAATGCTCCTTCATTC---AACGT-TGTCTAGTGATAGGCTTCCTGTAAGGCTGAGTCTATTTTAAGTGTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 932947 258 - 2196201 TAAGGCATACTGTAGTTCTGTTTACATGA-----C-----TTCTTGCAAGCTTC---CAA---GTCCCCA---TTGCCTGCTG---AGTGAAGTTCA-----CAGTCCTTCACGTGACGCTGAAGACGCTCAGTCCTCCGCTTTCAGATAACATCTCT-GGGG-GGTCGCCTGCCATCTTCCTTCACCCCTCCTAGAGTGCAGCTGACCTGCATAGGACTTAATGCTCCTTCATTC---AACGA-TATCTAGCGATAGTCTTCCGGTAAGGCTGAGTCTATTTTAAGTGTC- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3325956 253 - 5030052 TAAGGCA-----TAGCTCTGTTTACACGA-----C-----TTCTCGCAAGCTTC---CAA---GTCCCCA---TTGCCTGCTG---AGTGAAGTCCA-----CAGTCCTTCACGAGACGCTGAAGACGCTCAGTCTTCGGCTTTCAGATAATGTCTCT-GGCG-GGTCACCTGCCATTTTCCTTCACCCCTCCCAG-GTGCAAGTGACCTGCATAGGACTTAGTGCTCCTTCATTC---AACGA-TATCTAGTGATAGTCTTCCTGTAAGGCTGAGTCTATTTTAAGTGTCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172578 222 - 11315646 -AAAGAA-----TAATTCCATTTATGTTT-----C-----CTCTTGGAACTTTT---CAAC--AACTCCATGTTTGCCTACCA---GATAAAGTTCA-----CAGCCCTTCACCAGACATTGAAGACCCTGAATCTTCTGCTCTCTGATGGTGTCTCT-GACCTCCCCACTCTTTGTTTCCTTCC-TGCCT-CTAGACTGCAACTAATCTGTCTGGTATTTAGTGCTCATTCATTC---AAAGAGTACACAGTGT-GG---------------------------------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16864770 249 - 59632846 taaggca-----tggttccatttatgtta-----tttctattctcaaaaacttt---caacaataccctg---ctgcctattg---aatgatgttca-------gtctttaagccaacattg-aggtccttaatatgctgcttcccaatgatgtttct-ggccttatcacctaccagtt---------ccccctACAATATAGCTAATCTGAATAGTATTTAATGTCCATTCATT-----GCAAGTGGGTAGCGA-AAGCTTCCTGTAGAGCAGGTTTCCTTTTGAGTGCCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1357326 266 - 2520184 CAAAGCA-----TAGCTCCATTTATGTTAGTCCTC-----TTCTCAAAACCTTTCCACAA---TTCCCCA---TTGCCTATTAAGCAATGAAGTTCACCTCGCAGACCTTAGCTTGGCACTGACGGCCCTCAGCGCCGTGCTTGAAGGTT-TGTTTTG-GGCG---TCTCCTTCCACTTCCCTGCACATCTCCGGTACTGGAGCTCCTCCGAGCAGTACTTGGTGTTCATTCATTCTTTCCTAAGTATGTGCTGA-AAGCTTACTCTAGAGCAGGTTTCAGC----GTGTCT i dasNov3.JH570353 C 0 I 458 e proCoq1.NW_012145301v1 3883882 363 + 3993831 I e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=259488.000000 s hg38.chr4_KI270789v1_alt 26405 34 + 205944 TCACCCAGTG----ATAAGACTGA------CACGATCACCGCTC s panTro5.chr4 192818628 34 + 194502333 TCACCCAGTG----ATAAGACTGA------CACGATCACCGCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703238 34 + 195804263 TCACCCAGTG----ATAAGACTGA------CACGATCACCGCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739070 34 + 4876863 TCACCCAGTG----ATAAGACTGA------CACGATCACCGCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624749 38 + 115148730 TCACCCAGTGATCAATAAGGCTGA------CACGATGAGCGCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909686 37 + 190429646 TAACCCAATGACAAACAAGACTGA-------ACGATCACCGCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857129 37 + 189454096 TAACCCAATGACAAACAAGACTGA-------ACGATCACCGCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238520 37 - 25927173 TAACCCAATGACAAACAAGACTGA-------ACGATCACCGCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273511 37 + 4669795 TAACCCAATGACAAACAAGACTGA-------ACGATCACCGCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229868 37 + 135778131 TAACCCAATGACAAACAAGACTGA-------ACGATCACCGCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660579 37 - 2847728 TAACCCAATGACAAACAAACCTGA-------ACGATCACCGCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790910 37 + 2368649 TAACCCAATGACAAACAAGACTGA-------ACGGTCACCGCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554219 37 - 190850796 TAACCGAGCGATACAC-AGGCTGA------CATGATCCGTGCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044029 38 - 14256875 TAATTCAGTGATACATAAGGCTGA------CACGATCACTGCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933205 37 - 2196201 -AACCCAGTGATACATAAGGCTGA------CACGATCACTGTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326209 38 - 5030052 TAACCCAGTGATACATAAGGCTGA------CACAATCACCACTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172800 22 - 11315646 --------------ACAAAGCAGA------TACA--CACCTCTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16865019 37 - 59632846 TAACACAGTG-------TGACTGAGATACGCTTGGCCACTGCTC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3883882 363 + 3993831 I e micMur3.chr14 17462339 908 - 93316391 I e dasNov3.JH570353 1357592 458 - 2520184 I e mm10.chr8 86505395 1687 - 129401213 I a score=681106.000000 s hg38.chr4_KI270789v1_alt 26439 70 + 205944 TGTG----ATTAACATTACTTTGCTCACGCTCCCAACTCTGCTCCCTTCTCCAAGATACTTTTGTGCTCATTCA s panTro5.chr4 192818662 70 + 194502333 TGTG----ATTAACATTACTTTGCTCACGCTCCCAACTCTGCTCCCTTCTCCAAGATACTTTTGTGCTCATTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703272 70 + 195804263 TGTG----ATTAACATTACTTTGCTCACGCTCCCAACTCTGCTCCCTTCTCCAAGATACTTTTGTGCTCATTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739104 70 + 4876863 TGTG----ATTAACATTACTTTGCTCACGCTCCCAACTCTGCTCCCTTCTCCAAGATACTTTTGTGCTCATTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624787 69 + 115148730 TGTG----ATTAACG-TACTTTGCTCACGCTCCCAACTCTGCTCCCTTCTCCAAGACACTGTTGTTCCCATTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909723 70 + 190429646 TGTG----ATTAACATCACTTTGCTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTCTTCTCATTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857166 70 + 189454096 TGTG----ATTAACATCACTTTGCTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTCTTCTCATTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238557 70 - 25927173 TGTG----ATTAACATCACTTTGCTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTCTTCTCATTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273548 70 + 4669795 TGTG----ATTAACATCACTTTGCTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTGTTCTCATTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229905 74 + 135778131 TGTGATTAATTAACATCACTTTGGTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTGTTCTTATTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660616 70 - 2847728 TGTG----ATTAACATCACTTTGCTCATGCTCCCACCTCTGCTTCCCTCTCCAAGATGCTTTTGTTCTCATTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 790947 70 + 2368649 TGTG----ATTCACATCACTTTGCTCACGCTCCCACCTCTGCTTCCTTCTCCAAGATGCTTTTGTTCTCATTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554256 70 - 190850796 TGTA----GCTAACACCACCTTTCTCACACTCCTGCCTCTGCTTCCTTCTCCAAGATCTTTTTGTTCTCATTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044067 70 - 14256875 TGTA----ATTAACATCACCTTTCTCACACTCTTACCTCTGCTTCCTTCTCCAAGATATTTTTGTTCTCATTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933242 70 - 2196201 TGTA----ATTAATATCACCTTTCTCACACTCTTATATCTGCTTCCTTCTCCAAGATATTTTTGTTCTCATTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326247 70 - 5030052 TGTA----ATTAACATCACCTTTCTCACACTCCTACCTCTGCTTCCTTCTCCAAGATATTTTTGTTCTCATTCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11172822 60 - 11315646 CATG----GTGAGGGTCACT----------CACTGCCTCGGCTTCCTTCTTCAAGATATTTTGGTTTTCATGTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16865056 60 - 59632846 TACG----AC--ACATCACTTTGCTCGTTCTTTCACCTCTGAGAT--------ATATGTGTGTGTTCTCATTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358050 64 - 2520184 TGTG----ATCATTGCTCCACAGCACAC---CCCGCCTCCACTTCCACTCCTGAGGGAGCTTTGT-CACATA-- i dasNov3.JH570353 I 458 C 0 e proCoq1.NW_012145301v1 3883882 363 + 3993831 I e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=191565.000000 s hg38.chr4_KI270789v1_alt 26509 15 + 205944 TCCACATCTGATTTA s panTro5.chr4 192818732 15 + 194502333 TCCACATCTGATTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703342 15 + 195804263 TCCACATCTGATTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739174 15 + 4876863 TCCACATCTGATTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624856 15 + 115148730 TCCACATCTGATTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909793 15 + 190429646 TCCACACTGGATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857236 15 + 189454096 TCCACATTGGATTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238627 15 - 25927173 TCCACATTGGATTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273618 15 + 4669795 TCCACATTGGATTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229979 15 + 135778131 TCCACATTGGATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660686 15 - 2847728 TCCACATTGGATTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791017 15 + 2368649 TCCATATCGGATTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554326 15 - 190850796 TCCACATCTGATTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044137 15 - 14256875 TCCACATCTCATTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933312 15 - 2196201 TCCACATCTGATTTA i cebCap1.NW_016107886v1 C 0 I 150 s aotNan1.NW_018492112v1 3326317 15 - 5030052 TCCACATCTGATTTA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884245 15 + 3993831 TCCACACTTGATTTA i proCoq1.NW_012145301v1 I 363 C 0 s otoGar3.GL873580 11172882 15 - 11315646 GCCTCATCTGATTTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16865116 15 - 59632846 TCTACATTTTGTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358114 14 - 2520184 TCCACACCTTATTC- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=206264.000000 s hg38.chr4_KI270789v1_alt 26524 21 + 205944 TCTGGTGTGAAACTGATCATA s panTro5.chr4 192818747 21 + 194502333 TCTGATGTGAAACTGATCATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703357 21 + 195804263 TCTGGTGTGAAACTGATCATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739189 21 + 4876863 TCTGGTGTGAAACTGATCATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624871 21 + 115148730 TCTGCTGTGAAACTGATCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909808 21 + 190429646 TCTGGCGTGAAACTGATCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857251 21 + 189454096 TCTGGCGTGAAACTGATCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238642 21 - 25927173 TCTGGCGTGAAACTGATCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273633 21 + 4669795 TCTGGCGTGAAACGGATCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134229994 21 + 135778131 TCTGGCGTGAAACTGATCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660701 21 - 2847728 TCTGGCGTGAAATGGATCATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791032 21 + 2368649 TCTGGCGTGAAACTGACCATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554341 21 - 190850796 TCTGATGTGAAGCTGATAATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044152 21 - 14256875 TCTGAGGTGAAACTGAGAATA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3326332 21 - 5030052 TCTGACGTGAAACTGATAATA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884260 21 + 3993831 GCTGATGTGAAACTGATAACA i proCoq1.NW_012145301v1 C 0 I 1 s otoGar3.GL873580 11172897 21 - 11315646 GCTGATGTGAAATGGGTAATA i otoGar3.GL873580 C 0 I 193 s canFam3.chr16 16865131 21 - 59632846 TCTGATATGAAACAGATAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358128 4 - 2520184 -----CGTA------------ i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 933327 150 - 2196201 I e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=-3620.000000 s hg38.chr4_KI270789v1_alt 26545 2 + 205944 GG- s panTro5.chr4 192818768 2 + 194502333 GG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703378 2 + 195804263 GG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739210 2 + 4876863 GG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624892 2 + 115148730 CG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909829 2 + 190429646 CA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857272 2 + 189454096 CA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238663 2 - 25927173 CA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273654 2 + 4669795 CA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230015 2 + 135778131 CG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660722 2 - 2847728 CA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791053 2 + 2368649 CA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554362 2 - 190850796 CA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044173 2 - 14256875 CG- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3326353 2 - 5030052 CA- i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884282 1 + 3993831 -G- i proCoq1.NW_012145301v1 I 1 I 1 s otoGar3.GL873580 11173111 1 - 11315646 -g- i otoGar3.GL873580 I 193 I 1 s canFam3.chr16 16865152 1 - 59632846 -G- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1358132 2 - 2520184 -GG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 933327 150 - 2196201 I e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=6072.000000 s hg38.chr4_KI270789v1_alt 26547 4 + 205944 --TCTC s panTro5.chr4 192818770 4 + 194502333 --TCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703380 4 + 195804263 --TCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739212 4 + 4876863 --TCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624894 4 + 115148730 --TCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909831 3 + 190429646 --TCT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857274 3 + 189454096 --TCT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238665 3 - 25927173 --TCT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273656 3 + 4669795 --TCT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230017 3 + 135778131 --TCT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660724 3 - 2847728 --TCT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791055 3 + 2368649 --TCT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554364 4 - 190850796 --TCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044175 4 - 14256875 --TCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933477 4 - 2196201 --TCTC i cebCap1.NW_016107886v1 I 150 C 0 s aotNan1.NW_018492112v1 3326355 4 - 5030052 --TCTC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884284 3 + 3993831 --TTT- i proCoq1.NW_012145301v1 I 1 C 0 s otoGar3.GL873580 11173113 4 - 11315646 --tctc i otoGar3.GL873580 I 1 I 115 s canFam3.chr16 16865154 4 - 59632846 --TCTT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1358134 4 - 2520184 CCTC-- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=126063.000000 s hg38.chr4_KI270789v1_alt 26551 8 + 205944 CTTATTTA s panTro5.chr4 192818774 8 + 194502333 CTTATTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703384 8 + 195804263 CTTATTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739216 8 + 4876863 CTTATTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624898 8 + 115148730 CTTATTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909834 8 + 190429646 CTTATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857277 8 + 189454096 CTTATTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238668 8 - 25927173 CTTATTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273659 8 + 4669795 CTTATTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230020 8 + 135778131 CTTATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660727 8 - 2847728 CTTATTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791058 8 + 2368649 CTTATTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554368 8 - 190850796 CTCATTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044179 8 - 14256875 Cttattta i saiBol1.JH378165 C 0 I 155 s cebCap1.NW_016107886v1 933481 8 - 2196201 CTTATTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326359 8 - 5030052 CTTATTTG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884287 8 + 3993831 CTTATTTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11173232 8 - 11315646 CTTATTTA i otoGar3.GL873580 I 115 C 0 s canFam3.chr16 16865158 8 - 59632846 CTTATTTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358138 8 - 2520184 CTTATTGA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=679871.000000 s hg38.chr4_KI270789v1_alt 26559 56 + 205944 TGAAGTATTCTGGTAATTCCGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCGTGT s panTro5.chr4 192818782 56 + 194502333 TGAAGTATTCTGGTCATTCCGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCGTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703392 56 + 195804263 TGAAGTATTCTGGTCATTCCGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCGTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739224 56 + 4876863 TGAAGTATTCTGGTAATTCCGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCGTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624906 56 + 115148730 GGAAGCATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCACGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909842 56 + 190429646 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCTTCTTCATTCGCATGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857285 55 + 189454096 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTT-TTCTTCATTCGCATGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238676 56 - 25927173 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCTTCTTCATTCGCATGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273667 56 + 4669795 TGAAGTATTCTGGTCATTCTGACTGAAAGTTCTC--TTTTTCTTCTTCATTCTCATGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230028 56 + 135778131 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCGTCTTCATTCTCATGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660735 56 - 2847728 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCATGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791066 56 + 2368649 TGAAGTATTCTGGTCATTCTGACTGAAAGTCCTC--TTTTTCTTCTTCATTCTCATGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554376 55 - 190850796 TGAAGGATTCTGGTCATTCTGACGGAAAGTCCTC---TTTTCTTCTTGATTCTCATGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044342 56 - 14256875 TGAAGTATTCTGGTCATTCTGACGGAAAGTCCTC--TTTTTCTTCTTAATTCTCATGG i saiBol1.JH378165 I 155 C 0 s cebCap1.NW_016107886v1 933489 56 - 2196201 TGAAGTGTTCTGGTCATTCTGACGGAAAGTCCTC--TTTTTCTTCTTAATTCTCATGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326367 56 - 5030052 TGAAGTATTCTGGTCATTCTGACGGAAAGTCCTC--TTTGTCTTCTTAATTCTCATGG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3884295 58 + 3993831 GGAAACATTCTGGTCATTCTGACTGAAGGTCGTCTTTTTTTTTTCTTAATTCCCATGG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11173240 55 - 11315646 AGAAGCATTCAGGTCATTCTAGCTGAAGGTCATC---TTTTTTTCATAATTCCCATGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16865166 53 - 59632846 TAAAGCATCCTGGACGTTCTGACTAAATGCCCTC--TTTTTATTCTCAGTTTTCC--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358146 41 - 2520184 TGAAGTACTCTGGCAATC-----------TCTTC--CTTCTCTTATT-ATGAGCA--- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17462339 908 - 93316391 I e mm10.chr8 86505395 1687 - 129401213 I a score=633482.000000 s hg38.chr4_KI270789v1_alt 26615 50 + 205944 TATTTATTTATATCTTTTTCATCGCACTTAGC-CTTTTCACTCTTGGTCAG s panTro5.chr4 192818838 50 + 194502333 TATTTATTTATATCTTTTTCATCGCACTTAGC-CTTTTCACTCTTGGTCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703448 50 + 195804263 TATTTATTTATATCTTTTTCATCGCACTTAGC-CTTTTCACTCTTGGTCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739280 50 + 4876863 TATTTATTTATATCTTTTTCATCGCACTTAGC-CTTTTCACTCTTGGTCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112624962 50 + 115148730 TATTTATTTATATCTTTTTCATTGCACTTAGC-CTTTTCACTCTTGGTCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909898 50 + 190429646 TATATATTTATATCTTTTTCATTGCACTTAGT-CTTCTCACTGTTGGTCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857340 50 + 189454096 TATATATTTATATCTTTTTCATTGCACTTAGT-CTTCTCACTGTTGGTCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238732 50 - 25927173 TATATATTTATATCTTTTTCATTGCACTTAGT-CTTCTCACTGTTGGTCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273723 50 + 4669795 TATATATTTATATCTTTTTCATTGCACTTAGT-CTTCTCACTGTTGGTCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230084 50 + 135778131 TATTTATTTATATCTTTTTCATTGCACTTAAT-CTTCTCGCTGTTGGTCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660791 50 - 2847728 TATATATTTGTATCTTTTTCATTGCACTTGGT-CTTCTCACTGTTGGTCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791122 50 + 2368649 TATTTATTTATATCTTTTTCATTGCAGTTAGT-CTTTTCACTGTTGGTCAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554431 49 - 190850796 TGTTTATTCATATTG-TTTCACTGCACTTGGC-CTTTTCCCTCTTGGTCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044398 50 - 14256875 TGCTTATTTATATTGTTTTCACTGAACTTAGC-CTTTTCCCTCTTGGTCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933545 50 - 2196201 TGTTTATATATATCGTTTTCACTGCACTTAGC-CTTTTCCCTCTTGGTCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326423 50 - 5030052 TGTTGATTTATATGGTTTTCACTGCACTTAGC-CTTTTCCCTCTTGGTCAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17463247 50 - 93316391 TATTTGTTTATGTCTTTCCCACTGCACGTAGC-CTTAACACTCCTGATCTG i micMur3.chr14 I 908 C 0 s proCoq1.NW_012145301v1 3884353 50 + 3993831 TATTTGTTTACATCTTTCCCACTGCACGTAGC-CTTAGCACTCCTGGTCTG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11173295 48 - 11315646 TATTGGTTTACAGCCTTTGCACTGCACACAGG-CTTTGCGCTC--AGTCTG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16865219 51 - 59632846 TATTTATTTATATCTTCCTCATTGCAGTCCACATTTTTCACTCTTGGTGTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358187 50 - 2520184 TATTTATTTCTCTCTTCCTCCCTGCATGTATC-ATTTTCACTCTTGGTCGA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86505395 1687 - 129401213 I a score=2042539.000000 s hg38.chr4_KI270789v1_alt 26665 141 + 205944 C-TTTCTGTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCGCGACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAGTCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAACTTCTATTC s panTro5.chr4 192818888 141 + 194502333 C-TTTCTGTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCGCGACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCGGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAACTTCTATTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703498 141 + 195804263 C-TTTCTGTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCGCGACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCGGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAACTTCTATTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739330 141 + 4876863 C-TTTCTGTTCAGTGTTCAGGGAATACATGAATATTCTCTGAACCCGCAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCCGAATCCGGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAACTTCTATTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625012 141 + 115148730 C-TTTCTGTTCAGTGTTCAGGGAACACATGAAGATTCTCTGAACCCGCAACAAGGAATACTGTAGCTTGGAACAGTCTTTCTAAATCCGGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAACTTCTATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188909948 141 + 190429646 C-TTTCTTTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCAGAAAAAGGAATGCTGTAGCTTGGAATATTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTTTATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857390 141 + 189454096 C-TTTCTTTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCAGAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTTTATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238782 141 - 25927173 C-TTTCTTTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCAGAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTTTATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273773 141 + 4669795 C-TTTCTTTTCAGTGTTCAGGGAACACATGAAGATTCTCTGAACCCAGAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTTTATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230134 141 + 135778131 C-TTTCTTTTCAGTGTTTGGGGAATACATGAAGATTCTCTGAACCCAGAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTCCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTCTATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660841 141 - 2847728 C-TTTCTTTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCAGAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTTTATTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791172 141 + 2368649 C-TTTCTTTTCAGTGTTCAGGGAATACATGAAGATTCTCTGAACCCACAACAAGGAGTGCTGTAGCTTGGAATAGTCTTTCTAAATCCAGAGGCTGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTCTATTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554480 139 - 190850796 C-TTTCTGTTCAGTGTTTAGGGAATACGTGAAGATTCTCGGAAACCCCGACAAGGAACGTTGCAGCTTGGGATAGTCTTTCTAAATCC-CAGG-CGCTTTCGTCAACCGTGT--------GTGCCTTTCACAAGTTTCCAGCTTCTGTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044448 140 - 14256875 C-TTTCTGTTCAGTGTTTAGGGAATACATGAAGATTCTCGGAAACCCCGACAAGGAACGCTGTCGCTTGGAATAGTCTTTCTAAATCC-GAGGCCGCTTTCTCCAACCGTGT--------GTGCCTTTCATAAGTTTCCAGCTTCTATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933595 141 - 2196201 CTTTTCTGTTCAGTGTTTAGGGAATACATGAAGATTCTCGGAAACCCCGACAAGGAACGCTGTAGATTGGAATAGTCTTTCTAAATCC-GAGGCCGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTTTCCAGCTTCTATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326473 140 - 5030052 C-TTTCTGTTCAGTGTTTAGGGAATACATGAAGATTCTCAGAATCCCCAACAAGGAATGCTGTAGCTTGGAATAGTCTTTCTAGATCC-GAGGCCGCTTTCTTCAACTGTGT--------GTGCCTTTCACAAGTCTCCAGCTTCTGTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17463297 141 - 93316391 C-TTTCTGTTCCGTGTTGTGGGAGTATATGAAGATTCTCTGCACCCCAGGCAAGGAATGCTGGAGCTTGGAATAGTCTTCCTAAATCTGGAGGCTGCTTTCTTCAGTCATAC--------GTGCCTTCCACAAGTTTCCACCTCCTATTC i micMur3.chr14 C 0 I 115 s proCoq1.NW_012145301v1 3884403 140 + 3993831 C-TTTCAGTTCTGTGTTGTGGGAGTACATGAAGACTCCCTGCACCCCAGGCAAGAAATGCCGGAGCTTGGAATAGTCTTCCCAAATCT-AAGGCTGCTTTCTTCAGCCATAT--------GGGCCTTCCACAAGTTTCCACCTTCTATTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11173343 140 - 11315646 C-TTTGTGCCCAGTATTACAGGAGCACAAG-AGATTCCCTGAACTCTGAGCAAGGAACCCTGAAGCTGGGAATAGTCTTTCCAAACTTGGAGGCTGCTTCCTTTAGCCACAT--------GTGCATTCAACAAATTTTCAATTTCTATGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86507082 127 - 129401213 C-TTTTTGTTACATATTTCCAAAATACATGAAGATGCCTTGGATTATGTACAAGAAACCCAAACACTTGGAATAATCTCTA-------------TTCTGTCTCAAACACAGC--------GAGCA-AACATAAATTTCCAACTTCTTTTT i mm10.chr8 I 1687 I 3 s canFam3.chr16 16865270 126 - 59632846 C-CTTCTGTTTAGGA---------------AAGATTACTTGGACTCTAAACATACAATGTTGAAGCTTTGAATAGTCTTTCTAAATCTGGAGGCTACTTCCTTCTGCCATTT--------GTGCCTCTGACCACTTCCCAGCTCTCATAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358237 148 - 2520184 C-TTTCTGCTCAGTATTTACGGAATAAATGAAGAATTCCTCAATCCTGGACAAGCAAGGCAGAAGCTTGGAATCGATGTTCTAAATCTAGAGGCTGCTTTCCTCGACTATGTGACCACACGTGCCTTCCATAATTTCCCAGTCTTGTTT- i dasNov3.JH570353 C 0 C 0 a score=1162533.000000 s hg38.chr4_KI270789v1_alt 26806 99 + 205944 GGAGCCAGCCAG----TGCTGTGTCTACTGGTAC-AAAACATAGTG---TTGTAA-GGCTACACGTGGAAATGCGCTTAAACTAGAAGCAATAACAGACATAGGTTAG s panTro5.chr4 192819029 99 + 194502333 GGAGCCAGCCAG----TGCTGTGTCTACTGGTAC-AAAACACAGTG---TTGTAA-GGCTACACGTGGAAATGCGCTTAAACTAGAAGCAATAACAGACATAGTTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703639 99 + 195804263 GGAGCCAGCCAG----TGCTGTGTCTACTGGTAC-AAAACATAGTG---TTGTAA-GGCTACACGTGGAAATGCGCTTAAACTATAAGCAATAACAGACATAGGTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739471 99 + 4876863 GGAGCCAGCCAG----TGCTGTGTCTACTGGTAC-AAAACATAGTG---TTGTAA-GGCTACACGTAGAAATGCACTTAAACTAGAAGCAATAACAGACATAGGTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625153 101 + 115148730 GGAGCCAGCCAG----TGCTGTGTCTACTGGTACAAAAACATAGTG---TTGTAAGGGCTACACATAGAAATGCACTTAAACTAGAAGAAATAACAGACGTAGGTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910089 100 + 190429646 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGACCG---TTGTAA-GGCTAAACGTAGAAATGCACTTAAACTGGAAGCAGTAACAGACATAGGTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857531 100 + 189454096 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGACCG---TTGTAA-GGCTAAACGTAGAAATGCACTTAAACTGGAAGCAGTAACAGACATAGGTTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24238923 100 - 25927173 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGACCG---TTGTAA-GGCTAAACGTAGAAATGCACTTAAACTGGAAGCAGTAACAGACATAGGTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3273914 100 + 4669795 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGACTG---TTGTAA-GGCTAAACGTAGAAATGCACTTAAACTGGAAGCAATAACAGACATAGGTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230275 100 + 135778131 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGAGTG---TTGTAA-GGCTAAACGTAGAAATGCACTTAAACTAGAAGCAATAACAGACATAGGTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2660982 100 - 2847728 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGACTG---TTGTAA-GGCTAACCGTAGAAATGCACTTAAACTGGAAGCAATAACAGACATAGGTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791313 100 + 2368649 GGAGCCAGCCAA----TGCTGTGTCTACTGGTACAAAAACAGAGTG---TTGTAA-GGCTGAATGTAGAAATGCACTTAAACCAGAAGCAATAACAGACATAGGTTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554619 99 - 190850796 GGAGCCAGCCAA----TGCCGTGTCCACT-GTACAAAAACACAGTG---TTGTAA-AGCTAAATGTAGAAATGCGCTTAGGCTGCGGGCAGCAACAGACACAGGTTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044588 99 - 14256875 GGAGCCAGCCAA----TGCTGTGTCTGCT-GTACAAAAACAGAGTG---TTGTAA-GGCTAAATGTAGAAATGCAGTTAGACTACGAGCAATAACAGACATAGGTTAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933736 97 - 2196201 GGAGCCAGCCAA----CGCTGTGTCTGCT-GTACAAAAAC--AGTG---TTGTGA-GGCTGAATGTGGAAATGCACCTAGACTTTGAGAAATAACAGGCAGAGGCTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326613 99 - 5030052 GGAGCCAGCCAA----TGCTGTGTCTGCT-GTACAAAAACAGAGTG---TTGTAA-AGCTAAATGAAGAAATGCATTTAGACTATGAGCAGTAACAGACATAGGCTAG i aotNan1.NW_018492112v1 C 0 I 24 s proCoq1.NW_012145301v1 3884543 87 + 3993831 ATAGCCAGCCAC----TGCTGGGTCTACTGGTACAAAAACATATCG---TTGTAA-GGTTAAATGTAGAAATGCATTTA-------------AACAGACACAGGCTAC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11173483 100 - 11315646 TGAACCAGCCAC----TGCTGTGTGTACTGGTACAAAAACATACTG---CTGTGA-GGTTAAACACAGAAATGCATTTAAGTTGGACGCAATAGCAGAGGCAGGGTAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86507212 100 - 129401213 TAAGTCAACTACTACTTACTACATTTGCTGATTAAAAATCACATTG---TTATCA-TGTTGC-TGTTCAAATGCACTTAAATTGGCAATAGCAACAGTCATGGAA--- i mm10.chr8 I 3 C 0 s canFam3.chr16 16865396 98 - 59632846 AGAACCAGCTAC----TACTAAGTCTGCT-GTAACAGAACTTACTG---TTGTAA-GCTTAGA-GTAGAACTGCGCTGAAACTGGAGGCAACAACAGACACAGTCCAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1358385 100 - 2520184 GGAACCAGTCAC----TCCGGAGCCTCCT-GTGCAGGAGCCTATCACACCAGGAG-GTGGAAGTACAGAAACGTACTTAAGCCCATCATAACTGTGGACACA--CTGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17463438 115 - 93316391 I a score=45530.000000 s hg38.chr4_KI270789v1_alt 26905 6 + 205944 TGTAAG s panTro5.chr4 192819128 6 + 194502333 TGTAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703738 6 + 195804263 TGTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739570 6 + 4876863 TGTGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625254 6 + 115148730 TGTAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910189 6 + 190429646 TGTAAG i rheMac8.chr5 C 0 I 16 s macFas5.chr5 187857631 6 + 189454096 TGTAAG i macFas5.chr5 C 0 I 16 s macNem1.NW_012013133v1 24239023 6 - 25927173 TGTAAG i macNem1.NW_012013133v1 C 0 I 16 s cerAty1.NW_012001672v1 3274014 6 + 4669795 TGTAAG i cerAty1.NW_012001672v1 C 0 I 16 s chlSab2.chr7 134230375 6 + 135778131 TGTAAG i chlSab2.chr7 C 0 I 16 s manLeu1.NW_012102221v1 2661082 6 - 2847728 TGTAAG i manLeu1.NW_012102221v1 C 0 I 16 s colAng1.NW_012116221v1 791413 6 + 2368649 TGTAAG i colAng1.NW_012116221v1 C 0 I 16 s calJac3.chr3 189554718 6 - 190850796 GAGAAG i calJac3.chr3 C 0 I 16 s saiBol1.JH378165 13044687 6 - 14256875 GAGAAG i saiBol1.JH378165 C 0 I 16 s cebCap1.NW_016107886v1 933833 6 - 2196201 GAGAAG i cebCap1.NW_016107886v1 C 0 I 16 s proCoq1.NW_012145301v1 3884630 6 + 3993831 TTTAAG i proCoq1.NW_012145301v1 C 0 I 16 s otoGar3.GL873580 11173583 6 - 11315646 TATAAG i otoGar3.GL873580 C 0 I 16 s canFam3.chr16 16865494 6 - 59632846 TATATG i canFam3.chr16 C 0 I 6 s dasNov3.JH570353 1358485 5 - 2520184 TATAA- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17463438 115 - 93316391 I e mm10.chr8 86507312 0 - 129401213 C e aotNan1.NW_018492112v1 3326712 24 - 5030052 I a score=33609.000000 s hg38.chr4_KI270789v1_alt 26911 3 + 205944 TTA s panTro5.chr4 192819134 3 + 194502333 TTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703744 3 + 195804263 TTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739576 3 + 4876863 TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625260 3 + 115148730 TTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910211 3 + 190429646 TTA i rheMac8.chr5 I 16 C 0 s macFas5.chr5 187857653 3 + 189454096 TTA i macFas5.chr5 I 16 C 0 s macNem1.NW_012013133v1 24239045 3 - 25927173 TTA i macNem1.NW_012013133v1 I 16 C 0 s cerAty1.NW_012001672v1 3274036 3 + 4669795 TTA i cerAty1.NW_012001672v1 I 16 C 0 s chlSab2.chr7 134230397 3 + 135778131 TTA i chlSab2.chr7 I 16 C 0 s manLeu1.NW_012102221v1 2661104 3 - 2847728 TTA i manLeu1.NW_012102221v1 I 16 C 0 s colAng1.NW_012116221v1 791435 3 + 2368649 TTA i colAng1.NW_012116221v1 I 16 C 0 s calJac3.chr3 189554740 3 - 190850796 TTC i calJac3.chr3 I 16 C 0 s saiBol1.JH378165 13044709 3 - 14256875 CTA i saiBol1.JH378165 I 16 C 0 s cebCap1.NW_016107886v1 933855 3 - 2196201 TTA i cebCap1.NW_016107886v1 I 16 C 0 s micMur3.chr14 17463553 3 - 93316391 TTA i micMur3.chr14 I 115 C 0 s proCoq1.NW_012145301v1 3884652 3 + 3993831 CTG i proCoq1.NW_012145301v1 I 16 C 0 s otoGar3.GL873580 11173605 3 - 11315646 TTA i otoGar3.GL873580 I 16 C 0 s canFam3.chr16 16865506 3 - 59632846 TTC i canFam3.chr16 I 6 I 11 e dasNov3.JH570353 1358490 0 - 2520184 C e mm10.chr8 86507312 0 - 129401213 C e aotNan1.NW_018492112v1 3326712 24 - 5030052 I a score=9142464.000000 s hg38.chr4_KI270789v1_alt 26914 626 + 205944 TATTTTTTCTGTGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAAGTGAAGATCAGTAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATT-----GTTAGAAATATCCATCTGATTG-AGGAAAAGTGACATGTTTGCTTGAGGTATGTGTGTAATAGATTCCACTGACCAC---TGCACGGAATATGT-------GCAGACACAGCTGATGCTGCAACCTTATCTTAAAAACTCATCC-----TTT-AA--AAAATAATTTCCGCATCACAAATATGCTTTTTCTTTATTTCTTCTCATACCATTTTACCGCCTAGTTACCAATTTGCTGAAAACGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGCTCGAGGCTGTATATATGTTCTGAAAT-GGAAATAAAGTCTCTTTCAATGATTGGATTCAGTGGAGCTGGGTTTACTGTAAA---GGGAACTTTAATAGCTATTTTTCAATGAACACAGACCATCTCCTTTTGATTAAGTTTAACTATTAATGTAATTTGACAAGGAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTT-AAGCAAAAGCAAAGAAAAGAAGC s panTro5.chr4 192819137 626 + 194502333 TATTTTTTCTGTGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAAGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATT-----GTTAGAAATATCCATCTGATTG-AGGAAAAGTGACATGTTTGCTTGAGGTATGTGTGTAATAGATTCCACTGACCAC---TGCACGGAATATGT-------GCAGACATAGCTGATGCTGCAACCTTATCTTAAAAACTCATCC-----TTT-AA--AAAATAATTTCCGCATCACAAATATGCTTTTTCTTTATTTCTTCTCATACCATTTTACCGCCTAGTTACCAATTTGCTGAAAACATAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGCTCGAGGCTGTATATATGTTCTGAAAT-GGAAATAAAGTCTCTTTCAATGATTGGATTCAGTGGAGCTGGGTTTACTGTAAA---GGGAACTTTAATAGCTATTTTTCAATGAACACAGACCATCTCCTTTTGATTAAGTTTAACTATTAATGTAATTTGACAAGGAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTT-AAGCAAAAGCAAAGAAGCGAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192703747 626 + 195804263 TATTTTTTCTGTGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAAGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATT-----GTTAGAAATATCCATCTGATTG-AGGAAAAGTGACATGTTTGCTTGAGGTATGTGTGTAATAGATTCCACTGACCAC---TGCACGGAATATGT-------GCAGACACAGCTGATGCTGCAACCTTATCTTAAAAACTCATCC-----TTT-AA--AAAATAATTTCCGCATCACAAATATGCTTTTTCTTTATTTCTTCTCATACCATTTTACCGCCTAGTTACCAATTTGCTGAAAACGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGCTCGAGGCTGTATATATGTTCTGAAAT-GGAAATAAAGTCTCTTTCAATGATTGGATTCAGTGGAGCTGGGTTTACTGTAAA---GGGAACTTTAATAGCTATTTTTCAATGAATACAGACCATCTCCTTTTGATTAAGTTTAACTATTAATGTAATTTGACAAGGAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTT-AAGCAAAAGCAAAGAAGCGAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3739579 626 + 4876863 TATTTTTTCTGTGAGTCTTGAATTTTGTTTTCACTTTTATATTTCTGCAAGTGGAAGAT-GGCAAAAGGGCTGTAA--AGAAGTGAAGATCAGAAACTGCCTGAAATTTCAAGGCAAGAAAAGGCAGATT-----GTTAGAAATATCCATCTGATTG-AGGAAAAGTGACATGTTTGCTTGAGGTACGTGTGTAATAGATTCCACTGACCAC---TGTACGGAATATGT-------GCAGACACAGCTGATGCTGCAACCTTATCTTAAAAACTCATCC-----TTT-AA--AAAATAATTTCCGCATCACAAATATGCTTTTTCTTTATTTCTTCTCATACCATTTTACCGCCTAGTTACCGATTTGCTGAAAACGtactttcacaagaatcctgatttgca-gagcacaggtttccttagctcgaggctgtatatatgttctgaaat-GGAAATAAAGTCTCTTTCAATGATTGGATTCAGTGGAGCTGGGTTTACTGTAAA---GGGAACTTTAATAGCTA-TTTTCAATGAACATAGACCATCTCCTTTTGATTAAGTTTAACTATTAATGTAATTTGACAAGGAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTTAAAACAAAAGCAAAGAAAAGAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625263 624 + 115148730 TATTTTTTCTGTGAGTTTTGAATT---TTTTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AAAGGTAAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATT-----GTTAGAAATATCCATCTGACTGAAGGAAAAGTGACATGTTTGCTTGAGGTATGTGTGTAATAGATTCCACTGACCAC---TGCACGGAATATGT-------GCAGACACAGCTGATGCTGCAACCTTATCTTAAAAACTCATCC-----TTT-AA--AAAATAATTTCAGCATCACAAATATGCTTTTTCTTTATTTCTTCTCATACCATTTTACCACC-AGTTACCAATTTGCTGAAAACGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGCTCAAGTTTGTATGTATGTTCTGAAAT-GGAAATAAAATCTCTTTAAATGATTGGATTCAGTGGAGCTGGGTTTACTGTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCTTTTTGATTAGGTTTAACTATTAATGTAATTTGACAAGGAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTTAAAACAAAAGCAAAGACAAGAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910214 634 + 190429646 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAAGTGACATATTTGCTGGAGGTATGTATGTAATAGATTTCACTGACCGC---TGCACGGAATATGT-------GCAGATACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGCATTACAGATATGCTTTTTCTTCATTTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGTAGTTTCACAAGAATCCTGATGTGCA-GAGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCCGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGCGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACAAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTTAAAACAAAATCAAAGAAAAGAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187857656 634 + 189454096 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAAGTGACATATTTGCTTGAGGTATGTATGTAATAGATTTCACTGACCGC---TGCACGGAATATGT-------GCAGATACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGCATTACAGATATGCTTTTTCTTCATTTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGTAGTTTCACAAGAATCCTGATGTGCA-GAGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCCGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACAAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTTAAAACAAAATCAAAGAAAAGAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239048 634 - 25927173 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAAGTGACATATTTGCTTGAGGTATGTATGTAATAGATTTCACTGACCGC---TGCACGGAATATGT-------GTAGATACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGCATTACAGATATGCTTTTTCTTCATTTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGTAGTTTCACAAGAATCCTGATGTGCA-GAGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCCGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACAAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTTAAAACAAAATCAAAGAAAAGAAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274039 623 + 4669795 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAAGTGACATATTTGCTTGAGCTATGTATGTAATACATTTCACTGACCGC---TGCACGAAATATGT-------GCAGATACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGCATTACAGATGTGCTTTTTCTTCATTTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGTAGTTTCAGAAGAATCCTGATGTGCA-GAGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCTGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACAAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTT-----------AAAGAAAAGAAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134230400 629 + 135778131 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-AGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAGGTGACATGTTTGCTTGAGGTATGTATGTAATAGATTTCACTGACCGC---TGCACGGAATATGT-------GCAGACACAGCTGATGTTGCAACCATATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGCATTACAGATATGCTTTTTCTTCATTTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGCAGTTTCACAAGAATCCTGATGTGCA-GGGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCTGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACAAGGAGGTAAGAAGCTCATGGCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTT-----AAAATCAAAGAAAAGAAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661107 623 - 2847728 TATTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTAA--AGAGGTGAAGATCAGAAACTGCCTCCAATTTCAAGGCAAGAAAAGGCAGATTTAAAAGTTAGCAATATGCATCTGATTGAAGGAAAAGTGACATATTTGCTTGAGGTATGTGTGTAATAGATTTCACTGACCGC---TGCACGAAATATGT-------GCAGATACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAGTTTCAGCATTACAGATATGCTTTTTCTTCATGTCTTCTCATACCATTTTACCACCTAGTTACCAATTTGCTGAAAATGTAGTTTCAGAAGAATCCTGATGTGCA-GAGCACAGGTTTCCTTAGCGCAAGGTTGTGTGTATGTTCTGAAGT-GGAAATATAGTCTCTTTAAATGACTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAACTATTAATATAATTTGACGAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTT-----------AAAGAAAAGAAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 791438 615 + 2368649 TGTTTTTTCTGTGAGTTTTGAATTTTGTATTCACTTTTATATTTCTGCAAATGGAAGAT-GGCAAAAGGGCTGTGA--AGAGGTGAAGATCAGAAACTGCCTCAAATTTCAAGGCAAGAAAAGGCAAATTTAAAAGTTAGAACTATGCATCTGATTGAAGGAGAAGTGACATGTTTGCTTGAGGGATGTATGTAATAGATTTCACTGACCGC---TGCACGGAATATGT-------GCAGCTACAGCTGATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAA--AAAATAATTTCAGGGTGACAGATATGTTTTTTCTTCATTTCTTCTCATACCGTTTTACCACCTAGTTACCAATTTGCTGAACATGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGCTCAAGGTTGT--------------GT-GGAAATATAGTCTCTTTAAATGCCTGGATTCAGGGGAGCTGGGTTTACTCTAAA---GGGAATTTTAATAGCTATTTTTCAATGAACATAGACCATCTCCTTTGGATTAGGTTTAATTATTAATACAATTTGACAAGGAGGTAAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTGAAGTAACTT-----GAAATCAAAGAAAAGAAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189554743 622 - 190850796 TATTTTCTC--TGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGGAAACGGAAGAT-GGCAAAAGGGCCGTAA--AGGGACGAAGATCAGCAACTGCTTCAAATTTCCAGGCAAGAAAAAGCAGGTT-----GTTAGAAATATCCGTGTGATGGAAGG--AAGTGACATTTTTGCTTCAGGAATGTGTGTAATAGACTCTACTGACCAC---TTCATGGCATATGT-------GCAGACAAAGCTTATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAAACAAAGTAATTTCGGCATCACAAATATGCTTTTTCCTCATTTCTTTTCATACCATTTTATCACCTAGTTACCAGTTTGCTGAAAAAGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGGTCATGGTTGTATATATGTTCTGAAGT-GGAAATATAGCCTCTTTAAATGACAGGATTCGGTGGAGCTGGGTTTACTGTAAA---GGAAATTTTAACAGCTATTTTTCAATGAACATAGACCATCTCCTTCTGATTAGATTTAACTATTAATATACTTTGTCAAGAAGGTGAGAAGCTCATGCCTCATCTTCATCTG-----------C--TGTCTAAAGTAACTT-----AAAAGCAAAGAAAAGAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13044712 624 - 14256875 TATTTTTTC--TGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGGAAATTGAAGAT-GGCAAAAGGGCCATAA--AGAGGCGAAGATCAGCAACTGTTTCAAATTTCCAGGCAAGAAAAAGCAGGTT-----GTTAGAAATCTCCGTGTGATTGAAGGAAAAGTGACATTTTTGCGTGAGGCATGTGTGTAATACAGTCTACCGACCAC---TTCATGGGATATGT-------GCAGACACAGCTTATGTTGCAACCATATCTTAAAAACTCATCC-----TTTAAAACAAAATAATATTAGTATCACAAATACACTTTTTCCTTATTTCTTCTCATACCATTTTATCACCTAGTTACCAATTTGCTGAAAACGTCGTTTCAGAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGGTTAAGGTTGTACATATGTTCTGAAGT-GGAAATATAGTCTCTTTAAATGATTGGATTCAATGGAGCTGGGTTTACTATAAA---GGAAATTTTCATAGCTGTTTTTCAATGAACGTAGACCATCTCCTTTTGATTAGATTTAACTATTAATATAATTTGTCAAGAAGGTGAGAAGCTCATGCCTCATCTTCATCTT-----------C--TGTCTAAAGTAACTT-----AAACGCAAAGAAAAGAAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 933858 621 - 2196201 TATTTTTTC--TGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGGAAATGGAAGAT-GGCAAAAGGGCCATAA--AGAAGTGAAGATCAGCAACTGCTTCAAATTTCCAGGCAAGAAAAAGCAGGTT-----GTTAgaaatatccgtgtgattgaaggaaaagtgacattttggcttgaggtgtgtgtgtgatagagtctactgaccac---ttcactggatacgt-------gcagacacagcttCTGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAAACAAAATAATTTCAGCATCACAAATATGCTTTTTCCTTATTTCTTCTCACACCATTTTATCACCTAGTTACCAACTTGCTGAAAAAGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGGTCAAGGTTGTACATATGTTCT---GT-GGAAATACAGTCTCTTTAAATGATTGGATTCAGTGGAGCTGGGTTTACTATAAA---GGACATTTTCATAGCTGTTTTTCAATGAACATAGATCATCTCCTTTTGATTAGATTTAACTATTAATATAATTTGCCAAGAAGGTGAGAAGCTCATGCCTCAACTTCATCTG-----------C--TGTCTAAAGTAACCT-----AAAAGCAAAGAAAAGAAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3326736 635 - 5030052 TATTTTTTC--TGAGTTTTGAATTTTGTTTTCACTTTTATATTTCTGGAAATGGAAGAT-GGCAAAAGGGCCGTAA--AGAGGTGAAGATCAGCAACTGCTTCAAATTTCCAGGCAAGGAAAAGCAGGTT-----GTTGGAAATATCTGTGTGATTGAAGGAAAAGTGACATTTTTGCTTGAGGTATGTGTGTAATAGAGTCTACTGACCAC---TTCATGGGATATGT-------GCAGGCACAGCTTATGTTGCAACCGTATCTTAAAAACTCATCC-----TTTAAAACAAAATAATTTCAGCATCACAAATATGCTTTTTCCTTATTTCTTCTCATACCATTTTATCACCTAGTTACCCATTTGCTGAAAAAGTAGTTTCACGAGAATCCTGATTTGCA-GAGCACAGGTTTCCTTAGGTCAAGGTTGTACATATGTTCTGAAGT-GGAAATATAGTCTCTTTAAATGATTGGATTCAGTGGAGCTGGGTTTACTATAAA---GGAAATTTTCATAGCTGTTTTTCAATGAACATACACCATCTCCTTTTGATTAGATTTAACTATTAATATAATTTTTCAAGAAGGTGAGAAGCTCATGCCTCATCTTCATCTGTAGTTACTTTAC--TGTCTAAAGTAACTT-----AAAATCAAAGAAAAGAAGC i aotNan1.NW_018492112v1 I 24 C 0 s micMur3.chr14 17463556 627 - 93316391 TATTCTTTCCATGAGGTTTGAATTTTGTGCTCTCTTTTATGTTTCTTCAAATAGAAGAC-TGCAAAGGGGCTTACAGCAGAGGTGGAGGTCAGCAAATGCCACAAATGtcaaggcaagaaaaa-cgtatt-----ggttgaaatatccatatgattgaaggaaaagtggtatttttgcttgaattatctgtgtaatagattctattgtccac---ttcatagaatatgt-------gcagacacagcGTATGTTGCAACCCTATCTGAAAAACTCATCCTTTTTTTTAAA--AAAATAATTTCAGCATCACAAATATACTTTTTCTTTATTTCTTCTCATATCGTTTTACCACATAGTTACCAATTTGCTGAAAAAGTAGTTTCACAAGAATCCTGATTTGCA-GAGCACTGGTTTCTTCAGCTCAAGGTTGT--GTATGTTCTGAAGT-GGAAATAAAGTCCCTGGAAATGATTGAACTCAGTGGAGCTGAGTTTACTATTCT---GGGAATTTTAATAGCTGCTTCTTGGTGGACATAGACCATGTCCTTTTGATTAAGTTTA------AATATGATTTGGCAAGGAGATGAGAACCTCATGCCTCCTCTTTATCTG-----------C--TGTCCAAAGTGACTTAAAACAAAGGCAAATAAAAGAAGC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3884655 625 + 3993831 TATTCTTCCTATGAGTTTTGAATTTTGTGCTCACTTCTACGTTTCTTCAAATAGAAGAC-TGCAAAGGGGCTTACAGCAGAGGCGGAGATCAGCAAATGCCACAAATGTCAaggcgagaaaag-catatt-----ggttgaaatatccgtatgattgaaagaaaagtggtatttttgcttgaatcatctgcgtaatagattctattgtccac---ttcatggaatatgt-------gcagacacagcATATGTTGCAACCCTATCTTAAAAACTCATCC--TTTTTTAAA--AAAATAATTTCAGCATCACAAATATATTTTTTCTTTATTTCTTCTCATATCATTTTACCACACAGTTACCAATTTGCTGAAAAAGTAGTTTCGCAAGAATCCTGATTTGCA-GAGCACGGGTTTCCTCAGCTCAAGGTTGT--ATATGTCCTGAAGT-GGAAATAAAGTCCCTTGAGATGATTGAACTCAGTGGAGCTGAGTTTACTATTCA---GGGAATTTTAACAGCTGCTTCTTGGTGGACATAGACCATGTCCTTTTGATTACTTTTA------AATATGATTTGGCAAGGAGATGAGAAGCTCATGCCTCATCTTCACCTG-----------C--TGTCCGAAGTGACTTAAAACAAAAGCAAATAAAAGAAGC i proCoq1.NW_012145301v1 C 0 I 1618 s otoGar3.GL873580 11173608 629 - 11315646 TATTTTTTCTATGAGTTCTGAATTTTGTACTCACTTTTACATTTCTTCAGGTAGAAGACTTGCGAAGGGGCGTACAGCAGAGGTGAAGATCTGCAAATGCCACAGATTTCAAAGCAAGAGGAA-TATATT-----GGTGGAAATAGCCGTAGGATTGAAGGGAAAGTGGCATTTTTGCTTGAATTATCTGTGTAATAGACTCTACTGTCCAC---TTTGTGGAATAGGT-------GCAGACACAGCGGATGGTGTGACCCTGTCTTAAAAACTCATCC----TTTAAAA--AAAATAACTTCAGCATCACAAATGTGCTTTTTCTTTATTTCTTCTCATATCATTTTACCACTTAGCTAGCAATTTGCTGAAAAAGCAATTTCACAAGAATTCCAACTCGCA-GAGCACAGGTTTCCTCAGCTCGAGGTTGG--ATACGTTCTGAAGT-GGAAATAAAGTCCCTGGAAATGATTGAACACAGTGCAGCTTAGTTTACTATTTTAGGGGGAATTTTAACAGCTGCTTCTTGGTGGACATGGACCATCTCCTTTTGACTGGGTTTA------AATGTGATCGGGCAAGGAGGTGAGAGGCTCATGCCTCATCTTCCTCTT-----------CCATGTTCAGAGTTCCTTAAAGCAAAAGCAAACCAAAGAGGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86507312 585 - 129401213 --------CTGTGAGTTTTAAACT-------------------ACTTCAAATAGAAGAC-AGCAAAAAGACT-TCA--AGAGGTGATGAGCAGCAACTGCCAAAAAGTTCATGGCAAGGAAA---AGACT-----GTTTAAAATACACATACGATTGAAGAAAAAGTAGTATTTCTTGTCGGATTATCCATACAGTAGATACCATTGTCCAAATGTCCATGAAATATGCACAGACAGCAAACAGAGCTTATGTTGCAGCCATGTCTTGGCCACTCATCT-----TTTTAT--TTTATAAGTTCAGCACTATAAAAATACTTTCCTTCTGTTTCTTCT-GTATCATTTTACCGCATAGTTACCAATGTGCTGAAGAAGTGCTTTTAAAAGAATCCTGATTTGCAGGAATCCTGCTTCCCTTAACTTAAAGTTAT--ATATGTTCTGAAATAAGAAGTAAAATACCAGAAAAAAACTGAACTCAGTGAAGTTAAATCCACTCTTCA---GAGAACTTCAGTCTCTATTTTGATAAGTATTTTGATAAGCCTGTTAGAAATTCATTTA----------TGATTTAGC-AGGAGGTAAAAACCTCATTCTTCATCTTCATCTG-----------A--TGT--------ACAT--GACAAAGGCAAGCAAAAGAAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16865520 605 - 59632846 GATTTTTTCTGGGAATTTAAAAATTTCCCCTCAC------ATCCCTTCACATAGAAGAC-TGCAGAAGAACCATAA--AAAGGTGAAAATTAGCAATTGCCCCAAATTTTAGGCCAAGGAAAG-TATCTT-----GTTTGAAATAT-CGTATCACTGAAAGCAAAGTGGTATTTTAGCTTGAATTATCTGTGTAATAGATTCTACTGTCCAC---TTGACCGAATATAT-------GCAGACACAGCTTATGTTGCAACCCTATCTTAGCCACTCATCC-----TTTTTTTTGATATAGTTTCAGCATCACAAGTATACTTTTTCTTTATTTTCTCTCATGTTATATTACCACATAGTTACCAATTTGCTGAAGAAGTGGTTTC--AAGGATCCTGATTTGCA-GAGCACGGGATTCCTTAGCTCAAGGTTGT--ATACGTTCTGAAGT-AAAAATGAAATTCTTTTCAATGATTGAACTCAGTAGAGCTGAATTTACAGTTCA---GGAAATTTTAAGAGCC-TTTCTTGATGGACCTAGACCACCTCCTTCTGATTAAGTTTA------TATGTAATTTGGTAAGGAGC----GACATCATGCCTCATCTTCATCTA-----------T--TGTCCAGAGTGATTTAAAACAAAAACAAA---AAGAAGC i canFam3.chr16 I 11 C 0 s dasNov3.JH570353 1358490 549 - 2520184 ------------------TAAATT--GTTCTCA-TTTTCTATTTCTTCAAATTGCACAT-AGCAAA-GGGCTATAC--ATAGGTGAAGACCTGTCATTGCACCAAATTTCAAGCCAAGGAAAG-CATATT-----GTTTGAAATATCCATATGATTGGAGGAAAAGTGGTATTTTTGCTTGAATTATCTGTGTAATGGATTCTA-TGTCCAG---TTCATGGAATATGT-------GCAGACACAGCTTATGTTTCAGCCTTAAGTTAAGCACACATCC-----TTTTTA------TAATTTCAGCATTACCAATATAGTTTTCCTTTATTTCTTCACATACATTTTTACCACATAGCTATCAATTTGCTGAA----TAATTTCA-AATAATCATGATTTGCA-GAGCACAGGTTTCCTTAGCTCAGGGTTGC--TGATATTCTGAACT-AAAACTAT-GTTTTTCTAAGTGATTGAACTCACTG----------------------TGGAATTTCACTAGTTATCTCTTGGTGGACATAGATCATCTCCTTTTGAATAAGTTTA------TATATGATTTGGCAAGATGGAGAAATTTTCAAGCCTCGTTTTCATCCA-----------C--TATCTAAAGGGGCTT-----AAAAC-------------- i dasNov3.JH570353 C 0 C 0 a score=1019336.000000 s hg38.chr4_KI270789v1_alt 27540 81 + 205944 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTA--TT--TGAAATTATTTATAGAGAATTCACTGAAGTGAACT s panTro5.chr4 192819763 81 + 194502333 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTA--TT--TGAAATTACTTATAGAGAATTCACTGAAGTGAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704373 81 + 195804263 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTA--TT--TGAAATTACTTATAGAGAATTCACTGAAGTGAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740205 83 + 4876863 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCGGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCGCTGAAGTGAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625887 83 + 115148730 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTACTTT--TGAAGTTATTTATAGAGAATTCACTGAAGTGAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910848 83 + 190429646 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCAGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTAAAGTCAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858290 83 + 189454096 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCAGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTAAAGTCAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239682 83 - 25927173 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCAGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTAAAGTCAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274662 83 + 4669795 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCAGAAAATGCTGTTACTTT--TGAAATTATTTGTAGAGAATTCACTGAAGTCAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231029 83 + 135778131 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTGAAGTCAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661730 83 - 2847728 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCAGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTGAAGTCAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792053 83 + 2368649 AGTAAGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTACTTC--TGAAATTATTTATAGAGAATTCACTGAAGTCAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555365 64 - 190850796 AGTAGGGTGTTG-------------CTGTCTG-AAATGCTGTTACTTT--TGATATTGTTTATAGAGAATTCAGTG-----AACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045336 74 - 14256875 A----GGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTCCTTT--TGAAATTATTTATAGAGAATTCACTG-----AACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934479 78 - 2196201 AGTAGGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTTACTTT--TGAAATTATTTATAGAGAATTCACTG-----AACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327371 78 - 5030052 AGTAGGGTGTTGCTGCTGGAAAATTCTGTCTGAAAATGCTGTCACTTT--TGAAATTATTTATAGAGAATTCACTG-----AACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17464183 83 - 93316391 AATGGGACATGGCTGTTGGAAACTTCTGTCCATAAATGTTGTTACTTT--GGAAATTATTTATAGAAATTTCATTGGAATGGACT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11174237 83 - 11315646 AGTGGGACACTGTCATTGGAAAATTCTGTCAGCTGATGTTGTTAGTTT--TGAAATTATTTATCGAAATTTCTTTGGAATGGTCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86507897 77 - 129401213 AGTGTGCAGTAGCTGTTAAAAACGTTTCT------GTAATGTTGCCTT--TCTAATTATGTACAGAAAATGTATTTGACTGACCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16866125 85 - 59632846 CATAGTATATTGCAGTTAGAAAATTCTGTCTGTAAAGATTGTTTTTTTAAAGAAATTATTTATGGAGAATTCACTGTAATGAGAT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1359039 83 - 2520184 GACCAGGTATTGCTGATGGAAAATTCTGTCTGTAAATGTTGGTACCTG--TGAGAATGTTTATAGAAAATACTCTGGAATGAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I a score=844498.000000 s hg38.chr4_KI270789v1_alt 27621 60 + 205944 ATTTCAATAATATTTTTATGTTAACGAAGGTTATC---AATGATAAGATGAGCCAATTATAAT s panTro5.chr4 192819844 60 + 194502333 ATTTCAATAATATTTTTATGTTAACGAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704454 60 + 195804263 ATTTCAATAATATTTTTATGTTAACGAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740288 60 + 4876863 ATTTCAATAATATTTTTATGTTAATGAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112625970 60 + 115148730 ATTTCAATAATATTTTTATGTTAGTGAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910931 60 + 190429646 ATTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858373 60 + 189454096 ATTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239765 60 - 25927173 ATTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274745 60 + 4669795 ATTTCAATAATATTTTTATGTTAACAGAGGTTATC---AATGATAAGATGAGCCAATTATAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231112 60 + 135778131 ATTTCAGTGATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661813 60 - 2847728 ATTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792136 60 + 2368649 ATTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555429 59 - 190850796 CTTTCAATAATATTTTTATGTTAACAAAGGTTATC---AATCATAAGATGAG-CAATTATAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045410 60 - 14256875 ATTTCAATAATATTTTTATGTTAGCAAAGGTTATC---AATGATAAGCTGAGCCAATTATAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934557 60 - 2196201 ATTTCAATAACATTTTTATGTTAACAAAGGTTATC---AATGATAAGATGAGCCAATTATAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327449 60 - 5030052 ATTTCAATAACATTTTTATGTTAACAAAGGTTATC---AGTGATAAGATGAGCCAATTATAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17464266 63 - 93316391 GTGCCAAGAATATTTTCTTATTAACAAATGTTATCAATAATAATAAGATGAGCCAATTATAAT i micMur3.chr14 C 0 I 279 s otoGar3.GL873580 11174320 59 - 11315646 ATGCCAAGAATATTTTCTTATT-ACAAAGGTTATC---AATAATAAGATGAGCCAATTTTAAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16866212 57 - 59632846 AGTCCtataatatattctaattaataaaactt------aataataaGATGGGTTGATTATAAC i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1359122 60 - 2520184 ATTCCAATAATATTTTCTTGTTAATAAAAGTTATC---AATATTAAGATCAGCCCACTATGAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86507974 0 - 129401213 C a score=391866.000000 s hg38.chr4_KI270789v1_alt 27681 38 + 205944 AGTCTATTATAATTTAAAATGAATCACTGGTTATCTTT s panTro5.chr4 192819904 38 + 194502333 AGTCTTTTATAATTTAAAATGAATCACTGGTTATCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704514 38 + 195804263 AGTCTTTTATAATTTAAAATGAATCACTGGTTATCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740348 38 + 4876863 AGTCTACTATAATTTAAAATGAATCGCTGGTTATCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626030 38 + 115148730 AGTCTATTATAATTTAAAATTAATCACTGGTTATCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188910991 38 + 190429646 AGTCTGTTATAATTTAAAATTAATCACCAGTTATCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858433 38 + 189454096 AGTCTGTTATAATTTAAAATTAATCACCGGTTATCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239825 38 - 25927173 AGTCTGTTATAATTTAAAATTAATCACCGGTTATCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274805 38 + 4669795 AGTCTATTATAATTTAAAATTAATCACCGGTTATCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231172 38 + 135778131 AGTCTATTATAATTTAAAATTAATCACTGGTTATCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661873 38 - 2847728 AGTCTATTATAATTTAAAATTAATCACCGGTTATCTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792196 38 + 2368649 AGTGTATTGTAATTTAAAATTAATCCCTGGTTATCTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555488 38 - 190850796 CATCTATTATAATTCAAAATGAATCACTGGTTATTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045470 38 - 14256875 CGGCTATTATAATTTAAAATTAATCACTGGTTATTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934617 37 - 2196201 TGTCTATTATAATTCTAAATTAGTCACTGGTTA-TTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327509 38 - 5030052 CATCTATTATAATTTAAAATTAATCACTGGTTATTTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11174379 38 - 11315646 AGTCAATTATACATATATATATAttttttctttttttt i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16866269 38 - 59632846 AGCTGATTAGAACTTAAAATTGATCATAGATGCCTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1359182 38 - 2520184 AATCAGTTAATATTTGGAATTAATAGCTGGTTAGTTTT i dasNov3.JH570353 C 0 I 895 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e mm10.chr8 86507974 0 - 129401213 C a score=678341.000000 s hg38.chr4_KI270789v1_alt 27719 68 + 205944 TC---AACACATTTT--ATGTCcaggagagcagcatatctgcagtgctta----agtgtgcagtctctgaaggcagg s panTro5.chr4 192819942 68 + 194502333 TC---AACACATTTT--ATGTCcaggagagcagcacatctgcagtgctta----agtgtgcagtctctgaaggcagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704552 68 + 195804263 TC---AACACATTTT--ATGTCcaggagagcagcatatctgcagtgctta----agtgtgcagtctctgaaggcagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740386 68 + 4876863 TC---AACGTATTTT--ATGTCcaggagagcagcatatctgcagtgctta----agtgtgcagtctctgaaggcagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626068 70 + 115148730 TC---AATATATTTTACATGTCCAGGAGAGcagcatatctgcagtgctta----agtgtatagtctctgaaggcagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911029 70 + 190429646 TC---AACATATTTTACCTGTCcaggagagcagcatatctgcagtgctta----agtgtgtagtctctgaaggcagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858471 70 + 189454096 TC---AACATATTTTACCTGTCcaggagagcagcatatctgcagtgctta----agtgtgtagtctctgaaggcagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239863 70 - 25927173 TC---AACGTATTTTACCTGTCCAGGAGAGcagcatatctgcagtgctta----agtgtgtagtctctgaaggcagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274843 70 + 4669795 TC---AACATATTTTACCTGTCcaggagagcagcatatctgcagtgctta----agtgtgtagtctctgaaggcagg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231210 70 + 135778131 TC---AACATATTTTACCTGTCcaggagagcagcatatctgcagtgctta----agtgtgtagtctctgaaggcagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661911 70 - 2847728 TC---AACATATTTTACCTGTCcaggagagcagcgtatctgcagtgctta----agtgtgtagtctctgaaggcagg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792234 70 + 2368649 TC---AACATACTTTACCTGTCcaggagagcagcatgtctgcagtgccta----agtgtgtagtccctgaaggcagg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555526 68 - 190850796 TA---AACATATTTTACCTGTCcaggagagcagcacgtgtg--gcgctta----agcgtgcagtctctggagacagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045508 70 - 14256875 TC---AACATATTTTACCTGTCCGGGAGACCAGCTTGTCTGCAGGGCTTg----agcatgcagtctctgagggcagg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934654 70 - 2196201 TC---AACATATTTTACCTGTCcaggagagcagcacatctgcagtgccta----agcatgcagtttgtgagggcagg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327547 70 - 5030052 TC---AACATGTTTTACCTGTCcaggagagcagctcatctgcagtgctta----ggcatgcagtctctggagacagt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11174417 77 - 11315646 tttgagacagagtctcactcctgggtaaagtgctacggtgtcatagctcatagcagcctccaacttttggactcaag i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16866307 68 - 59632846 TC---AACACGTGTTATTTGTCAAGGGTAGcagcatatccacagtgcgtg----ggtgtgcaagccctgaagaca-- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e mm10.chr8 86507974 0 - 129401213 C a score=1474694.000000 s hg38.chr4_KI270789v1_alt 27787 150 + 205944 tgggaggtttgaattcagtctctaggg-tccgtacttctgtgaccttgggtg-------gcacagaaggcttat--cctttgtctaagccctgacttc-ctcaatagtaaaacagggataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga s panTro5.chr4 192820010 150 + 194502333 tgggaggtttgaattcagtctctaggg-tccgtacttctgtgaccttgggtg-------gcacagaaggcttat--cctttgtctaagccctgacttc-ctcaatagtaaaacagggataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704620 150 + 195804263 tgggaggtttgaattcagcctctaggg-tccgtacttctgtgaccttgggtg-------gcacagaaggcttat--cctttgtctaagccctgacttc-ctcaatagtaaaacagggataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAAgctgga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740454 150 + 4876863 tgggaggtttgaattcagtctctaggg-tccgtacttctgtgaccttgggtg-------gcacagaaggcttat--cctttgtctaagccctgacttc-ctcaatagtaaaacagggataataattctactta------gcTCAAA--------GTTAATACTCTA--------------------------TAggctgga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626138 150 + 115148730 tgggaggtttgaactcagtctctaggg-tccatgcttctgtgaccttgggtg-------gcacagaaggcttat--cctttgtgtaagccctgacttc-ctcaatagtaaaatagggataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggccgga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911099 150 + 190429646 tgggaggtttgaattcagtctctaggg-tctgtatttctgtgaccttggatg-------gcacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaaataggcataataattctactta------cctcaaa--------gTTAATACCCTA--------------------------TAggctgga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858541 150 + 189454096 tgggaggtttgaattcagtctctaggg-tctgtatttctgtgaccttggatg-------gcacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaaataggcataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24239933 152 - 25927173 tgggaggtttgaattcagtctctaggg-tccgtatttctgtgaccttggatg-------gcacagaaggcttaatctctttgtctaagccctgacttc-ctcaatagtaaaataggcataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3274913 150 + 4669795 tgggaggtttgaattcagtctctaggg-tccgtatttctgtgaccttggatg-------gcacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaaataggcataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231280 150 + 135778131 tgggaggtttgaattcagtctctaggg-tctgtatttctgtgaccttggatg-------gcacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaaatagacataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggccgga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2661981 150 - 2847728 tgggaggtttgaattcagtctctaggg-tccgtatttctgtgaccttggatg-------gcacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaaataggcataataattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggctgga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792304 150 + 2368649 tgggaggtttgaattcagtctcgaggg-tccgtatttctgtgaccttgggtg-------gtacagaaggcttaa--tctttgtctaagccctgacttc-ctcaatagtaaagtaggcatgagaattctactta------cctcaaa--------gTTAATACTCTA--------------------------TAggccgga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555594 149 - 190850796 tggaaggtttgaattcagtttctggag-tctgtacttctgtgacctcgggtg-------gcatcgaaggcttgt--cctttgtctaagccctgac-tc-ctcaatcgtaagacagggataataactctactta------cctcaaa--------gATAGTACTTTA--------------------------TAgaccagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045578 146 - 14256875 tgggaggtttggattcagtttctggag-tctgtacttcagtgaccttgggtg-------gcacagaaggcttat--cctttgcctaagccctga-----ctcaatagtaaaatagggatagtaattctactta------cctcaaa--------gTTAGTACTTTA--------------------------TAgaccagg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934724 149 - 2196201 tgggagatttgaactcagtttctggag-tctgcacttctgtgaccttgggcg-------gcacagaaggcttat--cctttgtctaagccctgag-tc-ctcaatagtaaaatagggatagtaattctactta------cctcaaa--------gTTAGTACTTTA--------------------------TAgaccagg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327617 149 - 5030052 tgggaggtttgaattcagtttctaggg-tctgtacttgtgtgaccttgggtg-------acatagaaggcttat--cctttgcctaagccctgac-tc-ctcaatagtaaaatagggatagtaattctactta------cctcaaa--------gTTAGTACTTCA--------------------------TAgaccagg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11174494 126 - 11315646 tcgtcctcttg-cctcagcctcctaag-ta-------ctgggactacaggtgcctgctaccacaactggctaat--tttt--------------cttt-ttt--tagtagagatgggctctcactattgcttaggctggtttcaaa--------ctt---------------------------------------ctgag i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86507974 140 - 129401213 TGAGAGGGTT---------CTCT---------------------------TA-----------------CTAAC--TCTTTGCCTAAGTTTCACCTTTATTCAATAATAAACCAATCACAAGAATTTTATTTA------TTTCAAGTTCATGTTGTTTAAACTTCAGTTCTTAATATTTATTAAGAAAGCATTGagccggg i mm10.chr8 C 0 C 0 s canFam3.chr16 16866375 147 - 59632846 --gtagactttaactccgtctttaagattccatacttgtatggccttgggta-------gttcattta-cttaa--actttctctaagccttgacttt-ctttatagcaaagt-ggaataacagttctactaa------tttcata--------gTAAGTACTCTA--------------------------CAAATTTGA i canFam3.chr16 C 0 I 335 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I a score=420269.000000 s hg38.chr4_KI270789v1_alt 27937 39 + 205944 c-acggtggctcacgcctgtaatcacagcactttgggagg s panTro5.chr4 192820160 39 + 194502333 c-acggtggctcacgcctgtaatcacagcactttgggagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704770 39 + 195804263 c-acggtggctcacgcctgtaatcacagcactttgggagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740604 39 + 4876863 c-acggtggctcacgcctgtaatcacagcactttgggagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626288 39 + 115148730 c-acggtggctcacgcctgtaatcccagcactttgggagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911249 39 + 190429646 c-acagtggctcatgcctgtaatcccagcactttaggagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858691 39 + 189454096 c-acagtggctcacgcctgtaatcccagcactttaggagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240085 39 - 25927173 c-acagtggctcacgcctgtaatcccagcactttaggagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275063 39 + 4669795 c-acagtggctcacgcctgttattccagcactttaggagg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231430 39 + 135778131 t-acagtggctcacgcctgtaatcccagcactttggaagg i chlSab2.chr7 C 0 I 204 s manLeu1.NW_012102221v1 2662131 39 - 2847728 c-acagtggctcacgcctgttattccagcactttaggaag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792454 39 + 2368649 t-acagtggctcacgcctgtaatcccagcactttggaagg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555743 39 - 190850796 c-acggtggctcatacctgtaatcccagcacgttgggagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045724 39 - 14256875 c-accgtggctcacgcctgtgatcccagcactttgggagg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934873 39 - 2196201 c-gcagtggctcacgcctgtaatcccagcactttgggagg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327766 39 - 5030052 c-gtggtggctcacgcctgcaatcccagcactttgggagg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11174620 35 - 11315646 c-tcagtggctc-ctcctgc---ctcagcctcccagagtg i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508114 39 - 129401213 cggtggtggcgcacacctttaatcccagcac-ttgggagg i mm10.chr8 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I a score=825582.000000 s hg38.chr4_KI270789v1_alt 27976 82 + 205944 ccgaggtgagcagataac-----ctgaggtcag---------------aagttcaagcccagcctggctgacatggtgaaaccccatctctactaaaaat--------------------ac s panTro5.chr4 192820199 82 + 194502333 ctgaggtgagcagataac-----ctgaggtcag---------------aagttcaagcccagcctggctgacatggtgaaaccccatctctactaaaaat--------------------ac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704809 82 + 195804263 ctgaggtgagcagataac-----ctgaggtcag---------------aagttcaagcccagcctggctgacatggtgaaaccccatctctactaaaaat--------------------ac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740643 82 + 4876863 ccgaggtgagcagataac-----ctgaggtcag---------------aagttcaagcccagcctggctgacatggtgaaaccccatctctactaaaaat--------------------ac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626327 82 + 115148730 ccgaggtgagcagatcat-----ctgaggtcag---------------aagttcaagaccagcctggctgatgtggtgaaaccccatctctactaaaagt--------------------ac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911288 82 + 190429646 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaat--------------------ac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858730 82 + 189454096 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaat--------------------ac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240124 82 - 25927173 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaat--------------------ac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275102 82 + 4669795 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactacaaat--------------------ac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231673 82 + 135778131 ccgaggtgagcagatgac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatttctactaaaaat--------------------ac i chlSab2.chr7 I 204 C 0 s manLeu1.NW_012102221v1 2662170 82 - 2847728 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactacaaat--------------------ac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792493 82 + 2368649 ccgaggtgagcagatcac-----ctgaagtcag---------------aagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaat--------------------ac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555782 82 - 190850796 ccaaggtgggcagatcac-----ctgaggtcag---------------gagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaat--------------------ac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045763 82 - 14256875 ccaaggtgggcagatcac-----ctgaggtcag---------------gagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaat--------------------ac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934912 82 - 2196201 ccaaggtgggcagatcac-----ctgaggtcag---------------gagtttgagaccagcctggctaacatggtgaaaccgcatctctactaaaaat--------------------ac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3327805 82 - 5030052 ccaaggcgggcagatcac-----ctgaggtcag---------------gagtttgagactagcctggccaacatggtgaaaccccatctctactaaaaat--------------------ac i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11174655 74 - 11315646 -----------------------ctaggataac---------------aagcatgagccacctct------cctggTGG----TCAATTTAATTTAAAATTAATCGATAATTACTTTTCAAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508153 102 - 129401213 cagaggcaggcaggtttctgagttcgaggccagcctggtctacagagtgagttccaggacagccggggctacacagagaaaccctgtcttgaaaaacaaa--------------------ac i mm10.chr8 C 0 I 258 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I a score=1310745.000000 s hg38.chr4_KI270789v1_alt 28058 141 + 205944 aaaaattatccaggcatggtggcac-gtgcttgtaat-cccagctactcgggaggctgaggcagtagaattgcttgaacccgg-------gaggcggagcttgaagtgagccgagatggc------gcca---------------ctgcactccagcctgggtgacagagc s panTro5.chr4 192820281 141 + 194502333 aaaaattatccaggcatggtggcac-gtgcttgtaat-cccagctactcaggaggctgaggcagtagaattgcttgaacccgg-------gaggcggagcttgaagtgagccgagatggc------gcca---------------ctgcactccagcctgggtgacagagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192704891 141 + 195804263 aaaaattatccaggcatggtggcac-gtgcttgtaat-cccagctactcgggaggctgaggcagtagaattgcttgaacccgg-------gaggcggagcttgaagtgagccgagatggc------gcca---------------ctgcactccagcctgggtgacagagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740725 141 + 4876863 aaaaattatccaggcatggtggcac-gtgcttgtaat-cccagctactcgggaggctgaggcagtagaattgcttgaacccgg-------gaggcggagcttgaagtgagccgagatggc------gcca---------------ctgcactccagcctgggtgacagagc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626409 140 + 115148730 aagaattatccaggcatagtggcat-gtgcttgtaat-cccagctacttgggaggctgaggcaggagaattgcttgaacccag-------gaggcggagcttgcagtgagccgagatggt------gcca---------------ctgcactccagcct-ggcgacagagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911370 141 + 190429646 aaaaattatccaggcatggtggcgt-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccgg-------gaggtggagcttgaagtgagccgagatagc------acca---------------ctgaactccaacctgggcaacagagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858812 141 + 189454096 aaaaattatccaggcatggtggcgt-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccgg-------gaggtggagcttgaagtgagccgagatagc------acca---------------ctgaactccaacctgggcaacagagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240206 141 - 25927173 aaaaattatccaggcatggtggcgt-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccgg-------gaggtggagcttgaagtgagccgagatagc------acca---------------ctgaactccaacgtgggcaacagagc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275184 141 + 4669795 aaaaattatccaggcatggtggcgt-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccgg-------gacgtggagcttgaaatgagccgagatagc------acca---------------ttgaactccaacctgggcaacagagc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231755 141 + 135778131 aaaaattatccaggcatggtggcac-gcacctgtaat-ccgagctactcaggaggctgaggcaggagaattgtttgaacccgg-------gaggtggagcttgaagtgagccgagaaagc------gcca---------------ctgaactccaacctgggcaacagagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662252 141 - 2847728 aaaaattatccaggcatggtggcgt-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccgg-------gacatggagcttgaagtgagccgagatagc------acca---------------ctgaactccaacctgggcaacagagc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792575 141 + 2368649 aaaaattatctgggcgtggtgatgg-gcacctgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccag-------gaggtggagcttgaagtgagccgagatagc------gcca---------------ctgaactccaacctgggcaacagagc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189555864 141 - 190850796 aaaaattagccaggtgtggtggcag-gcacctgtaat-cccagctactcaggaggctgaggcaggagaatcacttgaacccag-------gggacagaggttgcagtgagcagagatcgt------gcca---------------ctgcagtccagcctgggtgacagagc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045845 141 - 14256875 aaaaattaaccaggtgtggtggcag-gcatatgtaat-cccagctactcaggaggctgaggcaggagaattgcttgaacccaa-------agggcagaggttgcagtgagcagagatcgc------acca---------------ctgcactccagcctgggtgacagagc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 934994 141 - 2196201 aaaaattagcccggcatggtggcat-gcacctgtaat-tccagctactcaggaggctgaggcaggagaatcgcttgaacccaa-------ggggcagaggttgcagtgagctgagatcgt------gcca---------------ctgcactccagcctgggtgacagagc i cebCap1.NW_016107886v1 C 0 I 26 s aotNan1.NW_018492112v1 3327887 141 - 5030052 aaaaattagccaggtgtggtggcag-gcacctgtaat-cccagctactcaggaggctgaggcaggagaatcgcttgaacccaa-------ggggcagaggttgcagtgagcggagatcgc------gcca---------------ctgcactccagcctgggtgacagagc i aotNan1.NW_018492112v1 C 0 I 20 s otoGar3.GL873580 11174729 170 - 11315646 AAACTTCACTCATTTAGGGTAGTATCATATCTCtagtggtcaactgtgcagtctgggaagacagacagtggatgcgaattcagtctctaagagactgtacttg-ggtgaccttgggcggttcattaactaaccctttgtctaagccttgacttccttttaagtaaaatagg i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I e mm10.chr8 86508255 258 - 129401213 I a score=71903.000000 s hg38.chr4_KI270789v1_alt 28199 14 + 205944 gatatttagtctca s panTro5.chr4 192820422 14 + 194502333 gatatttagtctca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705032 14 + 195804263 gatatttagtctca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740866 14 + 4876863 gatatttagtctca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626549 10 + 115148730 ga----tagtctca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911511 14 + 190429646 gagatttagtctca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858953 14 + 189454096 gagatttagtctca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240347 14 - 25927173 gagatttagtctca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275325 14 + 4669795 gagatttagtctca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231896 14 + 135778131 gagatttagtctca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662393 13 - 2847728 gagatttagtctc- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792716 14 + 2368649 gaaatttagtctca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189556005 14 - 190850796 aagactctgtctca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13045986 14 - 14256875 aagactctgtttca i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11174899 12 - 11315646 ggcaataattct-- i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I e mm10.chr8 86508255 258 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I a score=11193.000000 s hg38.chr4_KI270789v1_alt 28213 4 + 205944 aa-aa s panTro5.chr4 192820436 4 + 194502333 aa-aa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705046 4 + 195804263 aa-aa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740880 4 + 4876863 aa-aa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626559 4 + 115148730 aa-aa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911525 5 + 190429646 aataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858967 5 + 189454096 aataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240361 5 - 25927173 aataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275339 5 + 4669795 aataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231910 5 + 135778131 aataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662406 2 - 2847728 ---aa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792730 5 + 2368649 aataa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13046000 4 - 14256875 aa-aa i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I e mm10.chr8 86508255 258 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e otoGar3.GL873580 11174911 0 - 11315646 C a score=17848.000000 s hg38.chr4_KI270789v1_alt 28217 12 + 205944 aCATTTTTTTAA s panTro5.chr4 192820440 12 + 194502333 aCATTTTTTTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705050 12 + 195804263 aCATTTTTTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740884 12 + 4876863 aaaTTTTTTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626563 12 + 115148730 aaatttaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911530 12 + 190429646 ataaataaataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858972 12 + 189454096 ataaataaataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240366 12 - 25927173 ataaataaataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275344 12 + 4669795 ataaataaataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231915 12 + 135778131 ataaataaataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662408 12 - 2847728 ataaataaataa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792735 12 + 2368649 atgaataaataa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11174911 9 - 11315646 ---acttccctc i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e dasNov3.JH570353 1359220 895 - 2520184 I e canFam3.chr16 16866522 335 - 59632846 I e mm10.chr8 86508255 258 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=372790.000000 s hg38.chr4_KI270789v1_alt 28229 59 + 205944 AAAGTTAATACTCTATAAATTTTAGCTCTTATTATTTATTTATTGTTAAGAAAATACTC s panTro5.chr4 192820452 59 + 194502333 AAAGTTAATACTCTATAAATTTTAGCTCTTATTATTTATTTATTGTTAAGAAAATACTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705062 59 + 195804263 AAAGTTAATACTCTATAAATTTTAGCTCTTATTATTTATTTATTGTTAAGAAAATACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740896 59 + 4876863 AAAGTTAATACTCTATAAATTTTAGCTCTTATTATTTATTTATTGTTAAGAAAATACTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626575 59 + 115148730 aaaGTTAATACTCTATAAATTTTAGCTCTTATTATTTATTTATTGTTAAGAAAATACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911542 55 + 190429646 aaaGTTAATACTTTACGAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187858984 55 + 189454096 aaaGTTAATACTTTATGAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240378 55 - 25927173 aaaGTTAATACTTTATGAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275356 55 + 4669795 aTAGTTAATACTTTATGAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231927 55 + 135778131 aaaGTTAATACTCTATAAATGTTAGCTCTTA----TTATTTATTGTTAAGAAAATACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662420 55 - 2847728 aaaGTTAATACTTTATGAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATATTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792747 55 + 2368649 aaaGTTAATACTCTATAAATTTTAGCTCTTA----CTATTTATTGTTAAGAAAATACTC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11174920 55 - 11315646 agagTTAATACTGTATAAACTTCAGCTCTTT----TTATTTATCGGCAGGAAGGTATTT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1360115 55 - 2520184 agagtAAATACTCTATATATTTTAGCTCTTA----TTGTTTGCTGTTCAGAATACATTC i dasNov3.JH570353 I 895 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e canFam3.chr16 16866522 335 - 59632846 I e mm10.chr8 86508255 258 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=6392.000000 s hg38.chr4_KI270789v1_alt 28288 1 + 205944 A s panTro5.chr4 192820511 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705121 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740955 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626634 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911597 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859039 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240433 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275411 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231982 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662475 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792802 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11174975 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508513 1 - 129401213 A i mm10.chr8 I 258 C 0 s dasNov3.JH570353 1360170 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464329 279 - 93316391 I e canFam3.chr16 16866522 335 - 59632846 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=496605.000000 s hg38.chr4_KI270789v1_alt 28289 62 + 205944 ACATTTTGAAGGAAATGATTATATCTTTCAACATTC-TTGTGACTTTTCTGGATATCTGCTGA s panTro5.chr4 192820512 62 + 194502333 ACATTTTGAAGGAAATGATTATATCTTTCAACATTC-TTGTGACTTTTCTGGATATCTGCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705122 62 + 195804263 ACATTTTGAAGGAAATGATTATATCTTTCAACATTC-TTGTGACTTTTCTGGATATCTGCTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3740956 62 + 4876863 ACATTTTGAAGGAAATGATTATATCTTTCAACATTC-TTGTGACTTTTCTGGATATCTGCTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626635 62 + 115148730 ACATTTTGAAGGAAATGATTATGTCTTTCAACATTC-TTGTGACTTTTCTGGATATCTGCTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911598 61 + 190429646 ACATTTTGAAGGAAATAATTATATCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCT-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859040 61 + 189454096 ACATTTTGAAGGAAATGATTATATCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCT-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240434 61 - 25927173 ACATTTTGGAGGAAATGATTATATCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCT-A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275412 61 + 4669795 ACATTTTGAAGGAAATGATTATATCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCT-A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134231983 62 + 135778131 ACATTTTGAAGGAAATTATTATCTCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662476 61 - 2847728 ACATTTTGAAGGAAATGATTATATCTTTCAACAGTC-TTGTGACTTTTCTGGATATCTGCT-A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792803 62 + 2368649 GCACTTTGAAGGAAATGACTGTCTCTTTCAACAGTC-TTGTGACTTTTCTGGGTATCTGCTGA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17464608 63 - 93316391 ACATTTTGAAGGAAATGATTTTATCTTTCAACATCCTTTGTGACCTTTAGAGATATCTGCTAA i micMur3.chr14 I 279 C 0 s otoGar3.GL873580 11174976 63 - 11315646 ACATTTTGAAGGAAATGTTCATATCCTTCAACATTCTTTGTGACCTTTATAGATATCTACCGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508514 62 - 129401213 GGCTGCTAAAGAACATCATTACACCTTTCAAATTCC-TTGTGAGTTTTAGAGATGTCAGCTGA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1360171 61 - 2520184 ATATATTGGAGGAAAAGTTTATGTCTTTCCATATTC-TC-TGACCTTTACATATGTCTGCTAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e canFam3.chr16 16866522 335 - 59632846 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=1467113.000000 s hg38.chr4_KI270789v1_alt 28351 182 + 205944 TTTGATGCATTTTTAAAAATCAAAATATGTAACATGTTTTTACCTTATTAATCT--AGCATACCATTTAAATATACA-A-CAGTGTTTCTTCTCTTGACTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGATCTGAGGTTTAACTTTAAATGCCAACATCATTTTTA s panTro5.chr4 192820574 182 + 194502333 TTTGATGCATTTTTAAAAATCAAAATATGTAACATGTTTTTACCTTATTAATCT--AGCATACCATTTAAATATACA-A-CAGTGTTTCTTCTCTTGACTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGATCTGAGGTTTAACTTTAAATGCCAATATCAttttta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705184 182 + 195804263 TTTGATGCATTTTTAAAAATCAAAATATGTAACATGTTTTTACCTTATTAATCT--AGCATACCATTTAAATATACA-A-CAGTGTTTCTTCTCTTGACTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGATCTGAGGTTTAACTTTAAATGCCAATATCATTTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741018 182 + 4876863 TTTGATGCATTTTTAAAAATCAAAATATGTAACATGTTTTTACCTTATTAATCT--AGCATACCATTTAAATATACA-A-CAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGATCTGAGGTTTAACTTTAAATGCCAATATCATTTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626697 183 + 115148730 TTTGATGCATTTTTAAAAATCAAAATATGTAACAGGTTTTTACCTTATTAATCT--AGCATACCATTTAAATATACG-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAATT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGCCAATATCATTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911659 183 + 190429646 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTACTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGTAAATATCAttttta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859101 183 + 189454096 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTACTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGTAAATATCAttttta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240495 183 - 25927173 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTACTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGTAAATATCATTTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275473 183 + 4669795 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTACTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGTAAATATCAttttta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232045 183 + 135778131 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTATAAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACG---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATTTAAATATCAttttta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662537 183 - 2847728 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTACTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTTGGCTAATAAGTGAACA---ATAATGATAATTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTAACTTTAAATGTAAATATCATTTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 792865 186 + 2368649 TTTGATGCACTTTTAAAAATCAAAATATGTAACATATTTTTACCTTATTAATCT--AGCATACCATTTAAATATACA-ACCAGTGTTTCTTCTCTGGGCTAATAAGTGAATGATAATAATGATAGTTCAA----CAACT-----ACATGATTTATTATCTGACCTGAGGTTTACCTTTAAATGTAAATATCATTTTTA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17464671 188 - 93316391 TTTAATGGATCTTTTTGAATCAAAATGTAT-AACCTATTTTATCATATTAATCT-GAGAGCACCATTTAAATATACA-ACCAATGTTTCTTCTCCCAGGTAATAAATAAACA---ATAATGATCATCCAA----CAGTTAGAAGATGTGATTGATTATCTGACCTAAGGATTGACTTTGAATGCCAATAGCATTCTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11175039 184 - 11315646 TGTCATGAACCTTTTTGAATGAAAATATATGAAGCATTTTTACCATATTAATTT-GAGAGCACCATTTAAATATGCA-GCCAGTGTTTCTTCTCTGAGGTAATAAATAAAAG---ATGGTAATTAGCCAA----CAATTAGAAGATATAACTGATTATCTGGCCTGAGGTTTGACTTTG-----CCAGAGCATTGTGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508576 166 - 129401213 CTTAATACATCTTTGC-AACCAAAACCTAAAATGTA-TTTCACCTTAACAATCtaaaaaataataattaaatat-------aGTG--------------TATTAAGTGAACG---CTAATGAGTATCCAAACTGAAACA-----ATATGGTTTATTAACTGACTTGAGATTTGAAAATCAAAACCAGTGACATTG-AA i mm10.chr8 C 0 C 0 s canFam3.chr16 16866857 188 - 59632846 cTTAATGCATGTTTCTAAATTAAAACATGTAGCATAATTTTAGC-TATTAATCT-GAGAGCACCATTTAGATATACATACTAGTGTTTCTT-TCCCAGGTAATCAGTGAACG---AAAATGGTCATCCAA----CAACTAGAAAATGTGATTAATTATCTGAAATGAGGTTTGATTTTAAATGTCAGCCATGTTTTTC i canFam3.chr16 I 335 C 0 s dasNov3.JH570353 1360232 163 - 2520184 -TTTATGT-CTTTTTTGAATCAAGACGTAGAACTTACTTCTACCTTATAAATAT------------------------G--AGAACTTCTTCTGCCAGTTAATCAATGAACA---AAAATGATCATCCAA----CAATTAGAGAATACAATTAATTATCTGATATGAGGTTTGACTTTGCATGACAACAGCATTTTTA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=493929.000000 s hg38.chr4_KI270789v1_alt 28533 64 + 205944 AGGTAttttaaaatagacttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa s panTro5.chr4 192820756 64 + 194502333 aggtattttaaaatagacttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705366 64 + 195804263 AGGTAttttaaaatagacttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741200 64 + 4876863 AGGTAttttaaaataggcttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626880 64 + 115148730 AGGTAttttaaaatagacttta-t-tt-ttaaagcagttttgtattcatagcaaaattgagcagaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911842 64 + 190429646 agatattttaaaacagccttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859284 64 + 189454096 agatattttaaaacagccttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240678 64 - 25927173 AGATAttttaaaacagccttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275656 64 + 4669795 agatattttaaaacagccttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232228 64 + 135778131 aggtattttaaaacagtcttta-t-tt-ttaaagcagttttgtgttcttagcaagattgagcagaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662720 64 - 2847728 AGATAttttaaaacagccttta-t-tt-ttaaagcagttttgtgttcatagcaaaattgagcagaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793051 64 + 2368649 AGATAttttaaaacagccttta-t-tt-ttaaagcagttttgtgttcataacaaaattgagcagaaa i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17464859 65 - 93316391 AGGTAttttaaaataaatttcatt-tt-taaaagcagttttatgttcatagaaaaattgagcagaaa i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11175223 51 - 11315646 GGATATTTTAAAATATACTTTA---------------TGTTATGCTTATAGTCAAG-TGAACGGAAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86508742 65 - 129401213 AAGCATTTTATCATTAAGttta-t-tcattaaagcagtttgatgcttagagaaacattgagcagaaa i mm10.chr8 C 0 I 1372 s canFam3.chr16 16867045 65 - 59632846 AGTGTGCttttaatagatgtta-tatt-ttagagcagttttagggaaatagcaaaattaagtagaaa i canFam3.chr16 C 0 I 4 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e dasNov3.JH570353 1360395 0 - 2520184 C e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=109950.000000 s hg38.chr4_KI270789v1_alt 28597 19 + 205944 ata--gagttccaatatatcc s panTro5.chr4 192820820 19 + 194502333 ata--gagttccaatacatcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705430 19 + 195804263 ata--gagttccaatacatcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741264 19 + 4876863 ata--gagttccaatacatcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626944 19 + 115148730 ata--gagttccaatatatcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911906 19 + 190429646 cta--gagttccaatatatcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859348 19 + 189454096 cta--gagtttcaatatatcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240742 19 - 25927173 cta--gagttcaaatatatcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275720 19 + 4669795 cta--gagttccaatatatcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232292 19 + 135778131 cta--gagttccaatatatcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662784 19 - 2847728 cta--gagttccaatatatcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793115 19 + 2368649 cta--gagttccagtatatcc i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17464924 21 - 93316391 gcacagagttctaatatatcc i micMur3.chr14 C 0 I 312 s otoGar3.GL873580 11175274 3 - 11315646 GTG------------------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867114 19 - 59632846 atg--gaattcccataaaccc i canFam3.chr16 I 4 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e dasNov3.JH570353 1360395 0 - 2520184 C e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=248845.000000 s hg38.chr4_KI270789v1_alt 28616 43 + 205944 ccacctccaaacattcatagcct-cccAACTGATAGCATTTTCC s panTro5.chr4 192820839 43 + 194502333 ccACCTCCAAACATTCATAGCCT-CCCAACTGTAAGTATTTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705449 43 + 195804263 ccacctccaaacattcatagcct-cccAACTGAAAGTATTTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741283 43 + 4876863 ccacctccaaacattcatagcct-cccAACTGAAAGCATTTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112626963 43 + 115148730 ccacctccagacatgcatagcct-cccAACTGAAAGCATTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911925 43 + 190429646 ccACCTCCAAACATGCGTAGCCT-CTCAACTGAAAGCATTTTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859367 43 + 189454096 ccacctccaaacatgcgtagcct-ctcAACTGAAAGCATTTTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240761 43 - 25927173 ccacctccaaacatgcgtagcct-ctcAACTGAAAGCATTTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275739 43 + 4669795 ccACCTCCAAACATGCGTAGCCT-CTCAACTGAAAGCATTTTCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232311 43 + 135778131 ccacctccaaacatgcatagcct-ctcAACTGAAAGCATTTTCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662803 43 - 2847728 ccacctccaaacatgcgtagcct-ctcAACTGAAAGCATTTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793134 43 + 2368649 ccacctccaaacatgcatagcct-ctcAACTGAAAGCATTTTCG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11175277 23 - 11315646 ------CCAAAC------------TCCACATGAAAGAATTT--- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867133 44 - 59632846 ctctccccacatatacgtaacctccttcacAAATAGCAGTTTTA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e dasNov3.JH570353 1360395 0 - 2520184 C e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=343949.000000 s hg38.chr4_KI270789v1_alt 28659 57 + 205944 TTGAAAGTTTAAT----GATTGAGGGTTGCCTGCTTTTACATA------ATTTA----CTACGTATTTTTT s panTro5.chr4 192820882 57 + 194502333 TTGAAAGTTTAAT----GATTGAGGGTTGCCTGCTTTTACATA------ATTTA----CTATGTATTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705492 57 + 195804263 TTGAAAGTTTAAT----GATTGAGGGTTGCCTGCTTTTACATA------ATTTA----CTATGTATTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741326 57 + 4876863 TTGAAAGTTTAAT----GATTGAGGGTTGCTTGCTTTTACATA------ATCTA----CTATGTATTTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627006 61 + 115148730 TTGAAAGTTTAAT----GATTGAGGGTTGCATGCTTTTACATA------ATCTACTGTCTATGTATTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188911968 60 + 190429646 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTTACATA------GTCTACTGTCTATGTATTTTT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859410 60 + 189454096 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTTACATA------GTCTACTGTCTATGTATTTTT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240804 60 - 25927173 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTTACATA------GTCTACTGTCTATGTATTTTT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275782 60 + 4669795 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTTACATA------GTCTACTGTCTATGTATTTTT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232354 60 + 135778131 TTGAAAGTTTAAT----CAGTGAGGGTTGCTTGCTTTCACATA------GTCTACTGTCTATGTATTTTT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662846 60 - 2847728 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTTACATA------GTCTACTGTCTATGTATTTTT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793177 60 + 2368649 TTGAAAGTTTAAT----GAGTGAGGGTTGCTTGCTTTCACATA------GTCTACTGTCTATGTATTTTT- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11175300 44 - 11315646 --------------------------TTGTTTATTTTTACATATTATGTGTTTACTAGGTTTCCACTTTT- i otoGar3.GL873580 C 0 I 236 s canFam3.chr16 16867177 60 - 59632846 ATG-AAGCTTAATTATAGATTGAGGGTTGCTTGCTTTTGTGTA------TTCTATCATCTATTTCTT---- i canFam3.chr16 C 0 I 57 s dasNov3.JH570353 1360395 61 - 2520184 TTGAAAGTTTAATTACATGTTGAGGGTTGCTTGCTTTTATGTA------ATTGATCATCTATTTATT---- i dasNov3.JH570353 C 0 I 18 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=1682375.000000 s hg38.chr4_KI270789v1_alt 28716 311 + 205944 AAAAATTATAggccaggcgtggtggctcacgcctgcaatcccagcactttgggaggctgaggcgggtggatcacctaaggtcaggagttcaagaccagcctgggcaacacagtgaaaccccgtctctactaaaaacacaaaaattagccaggcatggtggcgc-tgcctgtaatcccagctactcgggggactgaggcaggggaatcgcttgaaccttggaggcggaggttgcagtgagccgagaatgcgccagcctgggtgacagagcaagactccatctcaaaagtaaataaataaataaataaataaat s panTro5.chr4 192820939 311 + 194502333 AAAAATTATAggccaggcgtggtggctcacacctgcaatcccagcactttgggaggctgaggcgggtggatcacctaaggtcaggagttcaagaccagcctggccaacacagtaaaaccccgtctctactaaaaacacaaaaattagccgggcatggtggcgc-tgcctgtaatcccagctactcggggggctgaggcaggggaatcgcttgaaccttggaggcggaggttgcagtgagccgagaatgagccagcctgggtgacagagcaagactccatctcaaaagtaaataaataaataaataaataaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705549 309 + 195804263 AAAAATTATAggccaggcgtggtggctcacacctgcaatcccagcactttgggaggctgaggcgggtggatcacctaaggtcaggagttcaagaccagcctggccaacacagtaaaaccccgtctctactaaaaacacaaaaattagccgggcatggtggcgc-tgcctgtaatcccagctactcggggggctgaggcaggggaatcgcttgaaccttggaggcggaggttgcagtgagccgagaatgagccagcctgggtgacagagcaagactccatctcaaaagtaaataaataaataaataaataa-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741383 305 + 4876863 AAAAATTATAggccaggcatggtggctcaagcctgcaatcccagcactttgggaggctgaggcgggtggatcacctaaggtcaggagttcaagaccagcctggccaacacagtgaaatcccgtctctactaaaaacacaaaaattagccgggcatggtggcgc-tgcctgtaatcccagctactcggggggctgaggcaggggaatcgcttgaacctcggaggcggaggttgcagtgagccgagaatgcaccagcctgggtgacagagcaagactccatctcaaaagtaaataaataaataaataa------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627067 296 + 115148730 AAAAATTATAggccaggcgtggtggctcacgcctacaatcccagcac-ttgggaggctgaggcgggtggatcacctaagatcaggagttcaagaccagcctggccaacagagtgaaaccctgtctctactaaaaacacaataattagccgggcatggtggcgc-tgcctgtaatcccagctactcggggggctgaggcaggggaattgcttgaaccttggaggcggaggttgcagtgagccgagaacgcaccagcctgggtgacagagcaagactccatctcaaaaataaataaataa-------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912028 302 + 190429646 AAAAATTGTAggctgggcgtggtggctcacggctgtaatcccagcactttgggaggttgaggcaggtggatcacctgaggtcaggagttcaaggccagcctggccaacgcagtgaaaccctgtctctactaaaaacacaaaaattagccaggcatggtggtgaatgcctgtaatcccagctactcggggggctgacacaggggaatcgcttgaaccttggaggcggaggttgcagtgagctgagaacgagccagcctgggtgacagagcaagactccatctcaaaaataaataaataaa-----aaa----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859470 302 + 189454096 AAAAATTGTAggctgggcgtggtggctcacggctgtaatcccagcactttgggaggttgaggcaggtggatcacctgaggtcaggagttcaaggccagcccggccaacgcagtgaaaccctgtctctactaaaaacacaaaaattagccgggcatggtggtgaatgcctgtaatcccagctactcggggggctgacacaggggaatcgcttgaaccttggaggcggaggttgcagtgagctgagaacgagccagcctgggtgacagagcaagactccatctcaaaaataaataaataaa-----aaa----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24240864 302 - 25927173 AAAAATTGTAggctgggcgtggtggctcacggctgtaatcccagcactttgggaggttgaggcaggtggatcacctgaggtcaggagttcaaggccagcctggccaacgcagtgaaaccctgtctctactaaaaacacaaaaattagccgggcgtggtggtgaatgcctgtaatcccagctactcggggggctgacacaggggaatcgcttgaaccttggaggcggaggttgcagtgagctgagaacgagccagcctgggtgacagagcaagactccatctcaaaaataaataaataaa-----aaa----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3275842 302 + 4669795 AAAAATTGTAggctgggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgcagtgaaaccctgtctctactaaaaacacaaaaattagccgggcatggtggtgagtgcctgtaatcccagctactcgggggggtgacgcagaggaatcgcttgaaccttggaggcggaggttgcagtgagctgagaacgtgccagcctgggtgacagagcaagactccatctcaaaaataaataaataaa-----aaa----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232414 307 + 135778131 AAAAATTGTAggctgggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacacagtgaaaccctgtctctattaaaaacacaaaaattagccgggcatggtggtgagtgcctgtaatcccagctacttggggggctgacgtaggggaatcgcttgaacctcggaggtggaggttgcagtgagctgagaacgtgccagcctgggtgacagagcaagactccatctcaGaaataaataaataaataaataaa----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2662906 302 - 2847728 AAAAATTGTAggctgggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcaagaccagcctggccaacgcagtgaaaccctgtctctactaaaaacacaaaaattagccgggcatggtggtgagtgcctgtaatcccagctactcgggggggtgacgcagaggaatcgcttgaactttggaggcggaggttgcagtgagctgagaacgtgccagcctgggtgacagagcaagactccatctcaaaaataaataaataaa-----aaa----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793237 303 + 2368649 AAAAATTACAggctgggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggcagg-ggatcacctgaggtcaggagttcaagaccagcctggccaacacagtgaaaccccgtctctactaaaaacacaaaaattagccgggcatggtggtgagtgcctgtaatcccagctactcggggggccgaagcaggggaatcgcttgaacctcggaggcggaggttgcagtgagctgagaatgtgccagcctgggtgacagagcaagactccatctcaaaaataaataaattaa---ataaa----- i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e dasNov3.JH570353 1360456 18 - 2520184 I e canFam3.chr16 16867237 57 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C e otoGar3.GL873580 11175344 236 - 11315646 I a score=58518.000000 s hg38.chr4_KI270789v1_alt 29027 20 + 205944 aaataataaaataa---ataaaA-------- s panTro5.chr4 192821250 16 + 194502333 aa----taaaataa---ataaaA-------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705858 14 + 195804263 ------taaaataa---ataaaA-------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741688 14 + 4876863 ------taaaataa---ataaaA-------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627363 14 + 115148730 ------taaaataa---ataaaa-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912330 14 + 190429646 ------taaaataa---aTAAAA-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859772 14 + 189454096 ------taaaataa---aTAAAA-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241166 14 - 25927173 ------taaaataa---aTAAAA-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276144 14 + 4669795 ------taaaataa---aTAAAA-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232721 14 + 135778131 ------taaataaa---ataaaA-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663208 14 - 2847728 ------taaaataa---aTAAAA-------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793540 17 + 2368649 ------taaaaaaaTTTAAAAAA-------- i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16867294 20 - 59632846 --------ACATAA---AAAAATTTGTAGTG i canFam3.chr16 I 57 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e dasNov3.JH570353 1360456 18 - 2520184 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C e otoGar3.GL873580 11175344 236 - 11315646 I a score=7098.000000 s hg38.chr4_KI270789v1_alt 29047 1 + 205944 T s panTro5.chr4 192821266 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705872 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741702 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627377 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912344 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859786 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241180 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276158 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232735 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663222 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793557 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11175580 1 - 11315646 T i otoGar3.GL873580 I 236 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e dasNov3.JH570353 1360456 18 - 2520184 I e canFam3.chr16 16867314 0 - 59632846 C e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=802199.000000 s hg38.chr4_KI270789v1_alt 29048 121 + 205944 TATGTTAATAGATGTTACTATACATGTTCTGGTTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATGGATTTGAGAGTATTTGTACTTCA-G-GCAATAAGAAATATTGATCAAATCT s panTro5.chr4 192821267 121 + 194502333 TTTGTTAATAGATGTTACTATACATGTTCTGGTTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATGGATTTGAGAGTATTTGTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705873 121 + 195804263 TATGTTAATAGATGTTACTATACATGTTCTGGTTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATGGATTTGAGAGTATTTGTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741703 121 + 4876863 TATGTTAATAGATGTTACTATATATGTTCTGGCTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATGGATTTGAGAGTATTTGTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112627378 121 + 115148730 TATGTTAATATATGTTACTATATATGTTCTGGTTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATAGATTTGAGAGTATTTGTACTTCA-G-GGAATAAGAAATACTGATCAAATCT i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 188912345 121 + 190429646 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTACTTTATTACATTTGAGGAATAGATTTCGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187859787 121 + 189454096 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTACTTTATTACATTTGAGGAATAGATTTCGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24241181 121 - 25927173 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTACTTTATTACATTTGAGGAATAGATTTCGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3276159 121 + 4669795 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTACTTTATTACATTTGAGGAATAGATTTCGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134232736 121 + 135778131 TATGTTAATAGATGTTATCATGTATGTTCTAGTTAAAAACCT--GAGAAAATATTTTATTACATTTGAGGAATAGATTTAGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2663223 121 - 2847728 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTACTTTATTACATTTGAGGAATAGATTTCGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 793558 121 + 2368649 TATGTTAATAGATGTTACCATATATGTTCTGGTTAAAAACCT--GAGAAAGTATTTTATTACATTTGAGGAATAGATTTTGGAGTATTTCTACTTCA-G-GCAATAAGAAATATTGATCAAATCT i colAng1.NW_012116221v1 C 0 I 1 s otoGar3.GL873580 11175581 124 - 11315646 TAAGTTAATAGATGTTATCATCTATGTCCTTGTTAAAAACTTAGGAAGAATTACATTACTAAACTTGAGAAATAGATTTCAGAGTATTTGTACTTCAGG-GCCATAAGAGATATTCATCAAATCC i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16867314 66 - 59632846 -------------------------------------------------------T---TAAATTTGAAGAACAGATTCAAGAGTATTTGTATTTTA-GTGCAGTTAGAGATACTCATCAAATCT i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1360474 93 - 2520184 TAAGTTCATAGATGT--------ATGTCCTAGTTAAAAAC----G----ATTATATAATTGAATTTGAGGGCTAGATTCAGAACAGAGCAGAATTTA-G-AGACTAAGAGA-------------- i dasNov3.JH570353 I 18 C 0 e calJac3.chr3 189556019 0 - 190850796 C e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=77329.000000 s hg38.chr4_KI270789v1_alt 29169 15 + 205944 AAAAAAAAGGATCAT s panTro5.chr4 192821388 15 + 194502333 AAAAAAAAGGATCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192705994 15 + 195804263 AAAAAAAAGGATCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741825 15 + 4876863 AAAAAAAAAGATCAT i gorGor5.CYUI01015356v1 I 1 I 1 s nomLeu3.chr7b 112627500 15 + 115148730 AAAAAAAAGGATCAT i nomLeu3.chr7b I 1 I 2 s rheMac8.chr5 188912467 15 + 190429646 AAAAAATTGCATCAT i rheMac8.chr5 I 1 I 2 s macFas5.chr5 187859909 15 + 189454096 AAAAAATTGCATCAT i macFas5.chr5 I 1 I 2 s macNem1.NW_012013133v1 24241303 15 - 25927173 AAAAAATTGCATCAT i macNem1.NW_012013133v1 I 1 I 2 s cerAty1.NW_012001672v1 3276281 15 + 4669795 AAAAAACTGGATCAT i cerAty1.NW_012001672v1 I 1 I 2 s chlSab2.chr7 134232858 15 + 135778131 AAAAAACTGGATCAT i chlSab2.chr7 I 1 I 2 s manLeu1.NW_012102221v1 2663345 15 - 2847728 AAAAAACTGGATCAT i manLeu1.NW_012102221v1 I 1 I 2 s colAng1.NW_012116221v1 793680 15 + 2368649 AAAAAACTGGAACAT i colAng1.NW_012116221v1 I 1 I 2 s calJac3.chr3 189556019 8 - 190850796 aaaaaaaa------- i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11175708 15 - 11315646 GAAAATCTAATTCAT i otoGar3.GL873580 I 3 I 1 s canFam3.chr16 16867383 15 - 59632846 GAAAATCTGGATCAT i canFam3.chr16 I 3 I 2 e cebCap1.NW_016107886v1 935135 26 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e dasNov3.JH570353 1360567 0 - 2520184 C e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328028 20 - 5030052 I e saiBol1.JH378165 13046004 0 - 14256875 C a score=440036.000000 s hg38.chr4_KI270789v1_alt 29184 54 + 205944 AAAAAAGCATT----------------------TGATACTTTGTTTAT---------CCATATATTTGCGAACATAAATGGAGTT s panTro5.chr4 192821403 54 + 194502333 AAAAAAGCATT----------------------TGATACTTTGTTTAT---------CCATATATTTGCGAACATAAATGGAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706009 54 + 195804263 AAAAAAGCATT----------------------TGATACTTTGTTTAT---------CCATATATTTGCAAACATAAATGGAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741841 53 + 4876863 AAAAAAGCATT----------------------TGATACTTTGTTTAT---------CCATATATTTGCGAACATAAATGGAG-T i gorGor5.CYUI01015356v1 I 1 C 0 s nomLeu3.chr7b 112627517 54 + 115148730 AAAAAGGCATT----------------------TGATACTTTGTTTAT---------CCATATATTTGCAAACATAAATGGAGTT i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 188912484 54 + 190429646 GAAAAAGCATT----------------------TGATACTTTGTTTAT---------CAATATATTTGTGAACATAAATGCAGTT i rheMac8.chr5 I 2 C 0 s macFas5.chr5 187859926 54 + 189454096 GAAAAAGCATT----------------------TGATACTTTGTTTAT---------CAATATATTTGTGAACATAAATGCAGTT i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24241320 54 - 25927173 GAAAAAGCATT----------------------TGATACTTTGTTTAT---------CAATATATTTGTGAACATAAATGCAGTT i macNem1.NW_012013133v1 I 2 C 0 s cerAty1.NW_012001672v1 3276298 48 + 4669795 GAAAAAGCATT----------------------TGATACTTTGTT---------------TATATTTGTGAACATAAATGCAGTT i cerAty1.NW_012001672v1 I 2 C 0 s chlSab2.chr7 134232875 49 + 135778131 -AAAAAGCATT----------------------TGATACTTTATC-------------AACATATTTGTGAACATAAATGCAGTT i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012102221v1 2663362 48 - 2847728 GAAAAAGCATT----------------------TGATACTTTGTT---------------TATATTTGTGAACATAAATGCAGTT i manLeu1.NW_012102221v1 I 2 C 0 s colAng1.NW_012116221v1 793697 50 + 2368649 AAAACAGCATT----------------------TGATACTTTATC-------------AATATATTTGTGAACATAAATGCAGTT i colAng1.NW_012116221v1 I 2 C 0 s calJac3.chr3 189556027 54 - 190850796 aaaaaaGTATC----------------------TGATGCTCTGTTTAT---------CAATATATCTGTGAATATAAATGGAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046004 54 - 14256875 aaaaaaGTATT----------------------TGATGCCCTGTTTAT---------CAATATATCTGTGAATATAAATGGAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935161 54 - 2196201 aaagaaGTATT----------------------TGATGCTCTGTTTAT---------CAATATATCTGTGAATATGAATGGAGTT i cebCap1.NW_016107886v1 I 26 C 0 s aotNan1.NW_018492112v1 3328048 54 - 5030052 aaaaaaGTATT----------------------TGATGCTCTGTTTAT---------CAATATATCTGTGATTATAAATGGAGTT i aotNan1.NW_018492112v1 I 20 C 0 s otoGar3.GL873580 11175724 76 - 11315646 AAAAAAGTAGTTCTTAATCTCTGTGTGCATTGCTGATACTCTGTTTAT---------CAGTGTACTTGTGAAAATAAAACCAAAA i otoGar3.GL873580 I 1 I 1 s canFam3.chr16 16867400 78 - 59632846 AAAAAAGTAGTTTTAAATTTCTGTGTATGGTGATGATACCCAGCTTATC-------ACAGTGTATCTGTGAACATAACAGAAAAC i canFam3.chr16 I 2 I 1 s dasNov3.JH570353 1360567 49 - 2520184 ---AAGATAGT----------------------TTTTACTTTGTGTATATTGAGGGAACATAATCCTCTGAAAA----------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17464945 312 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=541173.000000 s hg38.chr4_KI270789v1_alt 29238 45 + 205944 TTTTGGATCAGATGACATAGTATCTAT---TTCCTTAATCTATGG------------GTT s panTro5.chr4 192821457 45 + 194502333 TTTTGGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGG------------GTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706063 45 + 195804263 TTTTGGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGG------------GTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741894 45 + 4876863 TTTTGGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGG------------GTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627571 45 + 115148730 TTTTGGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGA------------GTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912538 45 + 190429646 TTTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCAGTGG------------GTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187859980 45 + 189454096 TTTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCAGTGG------------GTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241374 45 - 25927173 TTTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCAGTGG------------GTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276346 45 + 4669795 TTTTTGATCAGATGACGTAGTATCTAT---TTCCTTAATCAGTGG------------GTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232924 45 + 135778131 TTTTTGATCAGATGACGTAGTATCTAT---TTCCTTAATCAGTGG------------GTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663410 45 - 2847728 TTTTTGATCAGATGACGTAGTATCTAT---TTCCTTAATCAGTGG------------GTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793747 45 + 2368649 TTTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCAGTGG------------GTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189556081 57 - 190850796 TCTTTGACCAGATGACATAGTATCTAT---TTCCTTAATCTGTGGGTTCTGGGTTAAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046058 57 - 14256875 TCTTTGATTAGATAACATAGTATCTAT---TTCCTTAATCTGTGGGTTCTGGGTTAAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935215 57 - 2196201 TCTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGGGTTCTGGGTTAAGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3328102 57 - 5030052 TCTTTGATCAGATGACATAGTATCTAT---TTCCTTAATCTGTGGGTTCTGGGTTAAGTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17465257 45 - 93316391 TTTTGGATCAGATGACATAGTATCTAT---TTCTATAATCTATGG------------GTT i micMur3.chr14 I 312 I 127 s otoGar3.GL873580 11175801 44 - 11315646 TTTTACATCAGATGATATATAATCTATAGATTCTTGAATACATC---------------- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16867479 57 - 59632846 TTTTGGATCAGATGACAAAGTATCCAT---AGCTATAATCTACAGGTTCTGGGATAAATT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1360616 45 - 2520184 TTTTGGACCAGATG------------T---TTCTGTAATCCATGGATTCTGAAATAAGTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I a score=1279207.000000 s hg38.chr4_KI270789v1_alt 29283 120 + 205944 AGAATATAAAATGTGATTGATTACAAAATAACTT-----GTTTTTCATGA-AAAA---AATTAGCAGCTCTTGTAAAATGCATCTGAATAAGGAG-AAAGTGTGCTACAAATGAGTAAAGAAAAACGCTG s panTro5.chr4 192821502 120 + 194502333 AGAATATAAAATGTGATTGATTACAAAATAACTT-----GTTTTTCATGA-AAAA---AATTAGCAACTCTTGTAAAATGCATCTGAATAAGGAG-AAAGTGTGCTACAAATGAGTAAAGAGAAACGCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706108 120 + 195804263 AGAATATAAAATGTGATTGATTACAAAATAACTT-----GTTTTTCATGA-AAAA---AATTAGCAACTCTTGTAAAATGCATCTGAATAAGGAG-AAAGTGTGCTACAAATGAGTAAAGAGAAACGCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3741939 119 + 4876863 AGAATATAAAATGTGATTGATTACAAAATAACTT-----GTTTTTCATG--AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAATAAGGAG-AAAGTGTGCTACAAATGAGTAAAGAAAAACGCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627616 120 + 115148730 GGAATATAAAATGTGATTGATTACAAAATAACTT-----GTTTTTCATGA-AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAATAAGGAG-AAAGTGTGCTACACATGAGAAAAGAAAAACGCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912583 119 + 190429646 AGAATATAAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGGAAAAA---AATTAGCAACTCTTGTAAAATGCAACTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860025 119 + 189454096 AGAATGTAAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGGAAAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241419 119 - 25927173 AGAATATAAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGGAAAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276391 118 + 4669795 AGAATATAAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGG-AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134232969 118 + 135778131 AGAATATCAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGG-AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663455 118 - 2847728 AGAATATAAAATGTGAGTGATTACAAAATAACTT-----GTTTTTCTTGG-AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAACGCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793792 118 + 2368649 AGAATATCAAATGTGACTGATTACAAAATAACTT-----GTTTTTCGTGG-AAAA---AATTAGCAACTCTTGTAAAATGCACCTGAAAAAGGAG-AAAGTGTGCTACAAATGAG--AATAAAAATGCTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189556138 121 - 190850796 AGAATATAAAATGTGACTGATTACAAAATGACTC-----ATTTTTCATGAAAAAA---TACTAGGAACTCTTGTAAAATGCACGTGAGCAAGGAG-AAAGTGTACTACAAATGAGGAAAGCAAACCACTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046115 118 - 14256875 AGAATATAAAATGTGGCTGATTACAAAATAACTC-----ATTTTTCATGAAAAAA---TACTAGAAACTCTTGTAAAACGCACCTGAGCAAGGAG-AAAGTGGACTACAAAT---GAAAGAAAACCACTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935272 121 - 2196201 AGAATATAAAATGTGACTGATTACAAAATAACTC-----ATTTTTCATGAAAAAA---TACTAGGAACTCTTGTAAAATGCACCTGAGCAAGGAG-AAAGTATACTACAAATGAGGAAAGAAAACCACTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3328159 120 - 5030052 AGAATATAAAATGTGACTGATTACAAAATAACTC-----ATTTTTCATGAAAAAA---TACTAGGAACTCTTGTAAAATGCACCTGAGCAAGGAG-AAAGTGTACTACAAAC-AGGAAAGAAAAGCACTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11175845 119 - 11315646 AGAATATAAAATGTGACTGGCTATAAAGTAACTC-----ATTTTTCTTGG-AAAAGGGGATCAGCA-----TGTAGGATGTATCTGAGTTTGGAGTAAGGTGCACTGTGGGTGAGAAAGGAAATACACTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867536 125 - 59632846 AGAATTCAAAATGTGGCTGATTAGAAGACAGCTTTC---ATTTTTCATGGAAGAAGTGGATCATCTGTTCTTATAGAATGTATTTGATTAAAGGG-AACATACAGTACAAATGAG-AAGGAAAAACACTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360661 119 - 2520184 AGAATACAAAATGTGACTGCTAATAAAATAATTTCTTAAATTTTTCACAGAAAAAGAGAATCAGCAACTTTTGTAGAATATATTTCAGTAGGGGA-CAAGTACACTACAAATGAGAAAAG---------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17465302 127 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=1194127.000000 s hg38.chr4_KI270789v1_alt 29403 105 + 205944 ACTGGCTATACAAATACA-CTACTCATTAGCACACAAAAACTGTCTCACTTAACCAGGGAACTCCTTCCATTCCATCAGGCATGCCTTCCAGAGCACGTTCTTGCC s panTro5.chr4 192821622 105 + 194502333 ACTGGCTATACAAATACA-TTACTCATTAGCACACAAAAACTGTCTCACTTAACCAGGGAACTCCTTCCATTCCATCAGGCATTCCTCCCAGAGCACGTTCTTGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706228 105 + 195804263 ACTGGCTATACAAATACA-TTACTCATTAGCACACAAAAACTGTCTCACTTAACCAGGGAACTCCTTCCATTCCATCAGGCGTTCCTCCCAGAGCACGTTCTTGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742058 105 + 4876863 ACTGGCTATACAAATACA-TTACTCATTAGCACACAAAAACCGTCTCACTTAACCAGGGAACTCCTTCCATTCCATCAGGCATTCCTCCCAGAGCACGTTCTTGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627736 105 + 115148730 ACTGGCTATACAAATACA-TTACATATTAGCACATAAAAACAGTCTTACTTAACTAGGGAACTCCTTCCATTCCATCAGGCATTCCTCCCAGGGCACATTCTTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912702 105 + 190429646 ACTGGCTGCACAAATACA-TTATGTATTAGCACACAAAAACCGTCTCACCTAACCAGGGAACTCCTTCCATTCTATCAGGCCTTCCTCCCAGAGCACGTGCTTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860144 105 + 189454096 ACTGGCTGCACAAATACA-TTATGTATTAGCACACAAAAACCGTCTCACCTAACCAGGGAACTCCTTCCATTCTATCAGGCCTTCCTCCCAGAGCACGTGCTTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241538 105 - 25927173 ACTGGCTGCACAAATACA-TTATGTATTAGCACACAAAAACCGTCTCACCTAACCAGGGAACTCCTTCCATTCTATCAGGCCTTCCTCCCAGAGCACGTGCTTGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276509 105 + 4669795 ACTGGCTGCACAAATACA-TTATGTATTAGCACACAAAAACCGTCTCACCTAACCAGGGAACTCCTTCCATTCCATCAGGCCTTCCTCCCAGAGCACATGCTTGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233087 105 + 135778131 ACTGGCTGTACAAATACA-TTATGTATTAGCACACAAAAATGGTCTCACCTAACCAGGGAACTCCTTCCATTCCATCCGGCGTTCCTCCCAGAGCACGTTCTTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663573 105 - 2847728 ACTGGCTGCACAAATACA-TTATGTATTAGCACACAAAAACCGTCTCACCTAACCAGGGAACTCCTTCCATTCCATCAGGCGTTCCTTCCAGAGCACGTGCTTGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 793910 105 + 2368649 ACTGGCTGTACAAATACA-TTATGTATTAGCACACAACCCCGGTCTCACTTAACCAGGGAACTCCTTCCATTCCATCAGGCGTTCCTCCCAGAGCATGTGCTTGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189556259 104 - 190850796 ACTGGCTGTATAAACACA-TTACGGATTGGCACACAAAGCCCG-CTCGCTCAGCCAGGGAACTCCTTCCGTTCTATCAGGCATTCCTCCCAGAGCACGTTCTTGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046233 99 - 14256875 ACTGGCTGTG-AAACATA-TTACATATTAGCACACAAAACCTG-CTCACT----TAGGGAACTCCTTCCGTTCTATCAGGCATTCCTCCCAGAGCACGTTCTTGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935393 104 - 2196201 ACTGGCTGTATAAACACA-TTACGTATTCGCACACAAAACCTG-CACACTTAGCCAGGGAACTCCTTCCATCCTAACAGGCATTCCTCCCAGAGCACGTTCTTGCC i cebCap1.NW_016107886v1 C 0 I 215 s aotNan1.NW_018492112v1 3328279 102 - 5030052 ACTGGCTGTATAAACACA-TTACGTATCAGT-CACAAAACCTG-CTCACTTAGCCGGGGAACTCCTTCCAGTCT-TCAGGCATTCCTCCCAGGGCACGTTCTTGCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17465429 105 - 93316391 ACTGCCTGTACAAATACA-CTACATATTAGCACACAAAAAATTTCTCGGTTAACCAAGGAACCACTTCTGTTCTACCAGACATTCCTCTCAGAACAAGTTCTCACC i micMur3.chr14 I 127 C 0 s otoGar3.GL873580 11175964 105 - 11315646 TTGGACTGTGCCAACACA-CCACACAGCAACACCCAAAAGCATTCTCAGTTAACCAAAGACACTCTTCAGTTCTGTCAGACATTCCTTCCGGAACAAGTTGTTGCC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867661 105 - 59632846 ACAGGCTATATAAATATATTTACATATTGGCACATCCAAAATT-CTCCACTAACCAAGGCATGTCATCTGTCCCACCAGGCATGCCACTCAGGACAAGCTCTTGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360780 94 - 2520184 ----TCTATACAAATACATTTATTTATGATCATAAAAAAATTT-CTCAATTA-------AGGCTTTTCTATCCTGTCAGACATCTCTCCCAGGGCAAATCCTTCCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I a score=71757.000000 s hg38.chr4_KI270789v1_alt 29508 5 + 205944 TTTTA s panTro5.chr4 192821727 5 + 194502333 TTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706333 5 + 195804263 TTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742163 5 + 4876863 TTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627841 5 + 115148730 TTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912807 5 + 190429646 TTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860249 5 + 189454096 TTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241643 5 - 25927173 TTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276614 5 + 4669795 TTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233192 5 + 135778131 TTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663678 5 - 2847728 TTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794015 5 + 2368649 TTTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189556363 5 - 190850796 tttta i calJac3.chr3 C 0 I 4773 s saiBol1.JH378165 13046332 5 - 14256875 attta i saiBol1.JH378165 C 0 I 233 s aotNan1.NW_018492112v1 3328381 5 - 5030052 tttta i aotNan1.NW_018492112v1 C 0 I 223 s micMur3.chr14 17465534 5 - 93316391 TTTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11176069 5 - 11315646 TTTTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867766 5 - 59632846 TCTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360874 5 - 2520184 TTTTA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 935497 215 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I a score=373858.000000 s hg38.chr4_KI270789v1_alt 29513 47 + 205944 AATCATCAATCATTGCTG----CCACTTTAGTGAGACCAAAAGGG----TTAAAA s panTro5.chr4 192821732 47 + 194502333 AATCATCAATCATTGCTG----CCACTTTAGTGAGACCAAAAGGG----TTAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706338 47 + 195804263 AATCATCAATCATTGCTG----CCACTTTAGTGAGACCAAAAGGG----TTAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742168 47 + 4876863 AATCATCAATCATTGCTG----CCACTTTAGTGAGACCAAAAGGG----TTAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627846 51 + 115148730 AATCATCAATCATTGCGG----CAACTTTAGTGAGACCAAAAGGGTTAATTAACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912812 47 + 190429646 AATCATCAATGATTGCTG----CAGCTTTAGTGAGACTGAAAGGG----TTAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860254 47 + 189454096 AATCATCAATGATTGCTG----CAGCTTTAGTGAGACTGAAAGGG----TTAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241648 47 - 25927173 AATCATCAATGATTGCTG----CAGCTTTAGTGAGACTGAAAGGG----TTAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276619 47 + 4669795 AATCATCAGTGATTGCTG----CAGCTTTAGTGAGACTGAGAGGG----TTAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233197 47 + 135778131 AATCATCAATGATTTCTG----CAGCTTTAGTGAGACCGAAAGGG----TTAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663683 47 - 2847728 AATCATCAATGATTGCTG----CAGCTTTAGTGAGACTGAAAGGG----TTAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794020 47 + 2368649 AATCATCAATGATTGCTG----CAGCTTGAGTGAGACCAAAAGGG----TTAAAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17465539 47 - 93316391 AATCATCAATGTCTGCTA----CAGCTTTAGTGAGACAAAAGGCA----TTAAAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11176074 47 - 11315646 CATCATCAGTGGCTGCTG----TAGCGTTAGTGAGACCAAAAGAA----TTAAAA i otoGar3.GL873580 C 0 I 1223 s canFam3.chr16 16867771 47 - 59632846 GACCATCAGGGATCTCTG----CAGCTTCAGTGAGATCAAAAGGG----CTAACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360879 51 - 2520184 GATTATCAGTGATTGCTTTCTCTATCTTTAGTGAGATCAAAAATA----GTAACC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189556368 4773 - 190850796 I e cebCap1.NW_016107886v1 935497 215 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328386 223 - 5030052 I e saiBol1.JH378165 13046337 233 - 14256875 I a score=140209.000000 s hg38.chr4_KI270789v1_alt 29560 19 + 205944 CTGAAACCCAGCCATTCC--C s panTro5.chr4 192821779 19 + 194502333 CTGAAACCCAGCCATTCC--C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706385 19 + 195804263 CTGAAACCCAGCCATTCC--C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742215 19 + 4876863 CTGAAACCCAGCCATTCC--C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627897 19 + 115148730 CTGAAACCCAGCCATTCC--C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912859 21 + 190429646 CTGAAGCCCAGCCATTCCCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860301 21 + 189454096 CTGAAGCCCAGCCATTCCCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241695 21 - 25927173 CTGAAGCCCAGCCATTCCCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276666 21 + 4669795 CTGAAGCCCAGCCATTCCCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233244 19 + 135778131 CTGAAACCCAGCCATTCC--C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663730 21 - 2847728 CTGAAGCCCAGCCATTCCCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794067 19 + 2368649 CTGAAACCCAGCCATTCC--C i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17465586 19 - 93316391 CTTAAACCCAGCCGTTCT--C i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11177344 19 - 11315646 CCCAAACCCAGCCATTCC--T i otoGar3.GL873580 I 1223 C 0 s canFam3.chr16 16867818 19 - 59632846 CTTAAAACGAGCCATCTC--C i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360930 13 - 2520184 ------TTTCATCATTCC--C i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189556368 4773 - 190850796 I e cebCap1.NW_016107886v1 935497 215 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328386 223 - 5030052 I e saiBol1.JH378165 13046337 233 - 14256875 I a score=25022.000000 s hg38.chr4_KI270789v1_alt 29579 2 + 205944 TT s panTro5.chr4 192821798 2 + 194502333 TC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706404 2 + 195804263 TC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742234 2 + 4876863 TC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627916 2 + 115148730 TC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912880 2 + 190429646 TC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860322 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241716 2 - 25927173 TC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276687 2 + 4669795 TC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233263 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663751 2 - 2847728 TC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794086 2 + 2368649 TC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561141 2 - 190850796 TC i calJac3.chr3 I 4773 C 0 s saiBol1.JH378165 13046570 2 - 14256875 TC i saiBol1.JH378165 I 233 C 0 s micMur3.chr14 17465605 2 - 93316391 TC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11177363 2 - 11315646 TC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867837 2 - 59632846 TC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360943 2 - 2520184 TT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 935497 215 - 2196201 I e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328386 223 - 5030052 I a score=361203.000000 s hg38.chr4_KI270789v1_alt 29581 26 + 205944 TCACTTCTGCAAATGCAGCTCAGCTT s panTro5.chr4 192821800 26 + 194502333 TCACTTCTGCAAATGCAGCTCAGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706406 26 + 195804263 TCACTTCTGCAAATGCAGCTCAGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742236 26 + 4876863 TCACTTCTGCAAATGCAGCTCAGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627918 26 + 115148730 TCACTTCTGCAAATGCAGCTCGGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912882 26 + 190429646 TCACTTCTGCAAATGCAGCTCAGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860324 26 + 189454096 TCACTTCTGCAAATGCAGCTCAGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241718 26 - 25927173 TCACTTCTGCAAATGCAGCTCAGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276689 26 + 4669795 TCACTTCTGCAAATGCAGCTCAGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233265 26 + 135778131 TCACTTCTGCAAATGCAGCTCAGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663753 26 - 2847728 TCACTTCTGCAAATGCAGCTCAGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794088 26 + 2368649 TCACTTCTGCAAATGCAGCTCAGCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561143 26 - 190850796 TCACTTCTGAAAATGCAGCTCAACTT i calJac3.chr3 C 0 I 4 s saiBol1.JH378165 13046572 26 - 14256875 TCACTTCTGAAAATGCAGCTCCAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935712 26 - 2196201 TCACTTCTGAAGATGCAACTCAGCCT i cebCap1.NW_016107886v1 I 215 C 0 s aotNan1.NW_018492112v1 3328609 26 - 5030052 TCACTTCTGAAAATGCAGCTCAACTT i aotNan1.NW_018492112v1 I 223 C 0 s micMur3.chr14 17465607 26 - 93316391 TCACTTCTGAAAACACAGCTCAACTT i micMur3.chr14 C 0 I 161 s otoGar3.GL873580 11177365 26 - 11315646 TCACTTCTGAAAACCCAGCTCAGTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867839 25 - 59632846 TCACTT-TGAAAACACAGTTCAACCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360945 25 - 2520184 TCATTTCTA-AAGCACATCTCCATTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I a score=1533340.000000 s hg38.chr4_KI270789v1_alt 29607 162 + 205944 TCCCTTCTCTGGTCTATAACAAATGCCACCCACTCTTTCCTCTGGGGTC----TTCT--CTGATTTGTATGGCCAGTCCCCAACCCGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAC----CCTCAGCAGTGGAAAGTCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTT s panTro5.chr4 192821826 162 + 194502333 TCCCTTCTCTGGTCTATAACAAATGCCACCCACTCTTTCCTCTGGGGTC----TTCT--CTGATTTGTATGGCCAGTCCCCAACCCGCCTCC--TG-----AACTTCCATGCAACAGTTTCAGAC----CCTCAGCAGTGGAAAGTCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706432 162 + 195804263 TCCCTTCTCTGGTCTATAACAAATGCCACCCACTCTTTCCTCTGGGGTC----TTCT--CTGATTTGTATGGCCAGTCCCCAACCCGCCTCC--TG-----AACTTCCATGCAACAGTTTCAGAC----CCTCAGCAGTGGAAAGTCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742262 162 + 4876863 TCCCTTCTCTGGTCTATAACAAATGCTACCCACTCTTTCCTCTGGGGTA----TTCT--CTGATTTGTATGGCCAGTCCCCAGCCCGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAC----CCTCAGCAGTGGAAAGTCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112627944 162 + 115148730 TCCCTTCTCTGGTCTATAACAAATGCCACCCACTCTTTCCTCTAGGATC----TTCT--CTGATTTGTATGACCAGTCCCCAACCCACCTCC--TG-----AACTTCCATGCAACAATTTCAGAC----TCTCAGCAGTGTAAAGTCTTAGCATATATGTTCTGTGAGCTTCGGGGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188912908 162 + 190429646 GCCCTTCTCTGGTCTATAACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAG----TCTCAGCAGTGTAAAGTCTTAGCATAGGTGTTCTGTGAGCTTCAGGGCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860350 162 + 189454096 GCCCTTCTCTGGTCTATAACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAG----TCTCAGCAGTGTAAAGTCTTAGCATAGGTGTTCTGTGAGCTTCAGGGCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241744 162 - 25927173 GCCCTTCTCTGGTCTATAACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAG----TCTCAGCAGAGTAAAGTCTTAGCATAGGTGTTCTGTGAGCTTCAGGGCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276715 162 + 4669795 GCCCTTCTCTGGTCTATAACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTCC--TG-----AACTTCCATGCAACAATTTCAGAG----TCTCAGCAGTGTAAAGTCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233291 142 + 135778131 GCCCTTCTCTGGCCTATAA--------------------CTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAGCCCACCTCC--TG-----AACTTCCATGCAACAATTTCAGAG----TCTCAGCAGTGTAAAGTCTTAGCGTAGGTGTTCTGCAAGCTTCAGGGCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663779 162 - 2847728 GCCCTTCTCTGGTCTATAACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTTC--TG-----AACCTCCATGCAACAATTTCAGAG----TCTCAGCAGTGTAAAATCTTAGCATAGATGTTCTGTGAGCTTCAGGGCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794114 162 + 2368649 GCCCTTCTCTGGTCTATCACAAATGTCCCCAGCTCTTTCCTCTGGGGTC----TTCT--CTGGTTTGTATGGCCAGTCCCCAACCTGCCTCC--TG-----AACTTCCATGCAACAGTTTCAGAG----TCTCAGCAGTGTGAAGTCTTAGCAAAGATGTTCTGTGAGCTTCAGGGCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561173 158 - 190850796 TCCCTTCTTGGGTCTAGAACACATGCCACCCACTCTTTTCTTTGGGGTC----CTCT--CTGA-TTGTATGGCGAGTCCCCAGCCCGCCCCC-CTG----AAATTTCCATACAACAATTTCAGAC----TCTGAGAAGCAT-AAGTCT----ACAGATGTTCTGTGAGCTTCAGTGCTC i calJac3.chr3 I 4 C 0 s saiBol1.JH378165 13046598 156 - 14256875 TCCCTTCTCGGGTCTAGAACAAATGCCACCCACTCTTTCCTTTGGGGTC----CTCT--CGGATTTGTATGGCGAGTCCCCAACCCGCCCCC-GTG----AAACTTCCAT---ACGGTTTCAGAC----TCTCAGCAGTAT-AAGTCT----ATAGACGTTCTGTGAGCTTCAGTGCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935738 143 - 2196201 TCCCTTCTCGGGTCTAGAACAAATGCCACCCACTCTTTCCTTTGGGGTC----CTCT--CTGA-TTGTAAGGCGAGTCCCCAACCCGCCCCC--TG----AAACTTCCAT---ACAATTTCAGAC----TCTCAGCAGCGT-AAG---------------TCAGTGAGCTTCAGTGCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3328635 156 - 5030052 TCCTTTCTCAGGTCTAGAACAAATGCCACCCACTCTTTCCTTTGGGGTC----CTCT--CTGATTTGTATGGCGAGTCCCCAACCCGCCCCC--TG----AAACTTCCATACAACAATTTCAGAC----TCTCAGCAGCAT-AAGTCT----GTAGAT--TCTGTGAGCTTCAGTGCTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11177391 153 - 11315646 CCGGTTCCGTGCTCTGTGACAGATGCCACCATCTTTTCCTTTGGGGCTC----TGCTGACTGACTAGTGTGGCCAGTCACTAAGC--CCAGG--TG----TAGCCCCCATGCAACAGTTTCTGACGTAATTTCAGCAGCAC--------------CATGTTTTGGGAAATTCAGCACTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16867864 169 - 59632846 CTGGTTCTCAGCTCTGTTATAAATGCCACCCACTCTTTCCCTTGGGGTCATATTTTT--CTGACTAGTAGGGCCAGCTCTTCTCTTACCTCC--TGCCCTTGACTTCTACCCAGTGA-TTCAGAC----TCTAAGCAGCCT-GAGTCTGAGTGCAAATGCTTTGTGAACTTCAGCACCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1360970 156 - 2520184 GCACTTCTCTGCATTATAACAGAGGCCACTCCTGCTTCTCTGTGGGGTCGCA-GTCT-------TGGCACTGACAG---CTATCCCACCTCCCCTT-----TCTCTCTCCGCAAGAAGCTCAGAT----TCAAAG--GCAT-ACATCTTAGTGCGAATATTTTGTGAATTTCAGGACCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3885280 1618 + 3993831 I e micMur3.chr14 17465633 161 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=1097588.000000 s hg38.chr4_KI270789v1_alt 29769 72 + 205944 AACCCCTCATGAAACTTGACCTGAATCCGTCAGTGGATAGAAA-AC-GGATTTCATATTTAGAATCAGCATAAC s panTro5.chr4 192821988 72 + 194502333 AACCCCTCATGAAACTTGACCTGAATCCGTCAGTGGATAGAAA-AC-GGATTTCATATTTAGAATCAGCATAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706594 72 + 195804263 AACCCCTCATGAAACTTGACCTGAATCCGTCAGTGGATAGAAA-AC-GGATTTCATATTTAGAATCAGCATAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742424 72 + 4876863 AACCCCTCATGAAACTTGACCTGAATCCGTCAGTGGATAGAAA-AC-GGATTTCATATTTCGAATCAGCATAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628106 72 + 115148730 AACCCCTCATGAAACTTGACCTGAATCCGTCAGTGGATAGAAA-AT-GGATTTCATATTTAGAATCAGCATAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913070 72 + 190429646 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGATAGAAA-TT-TGATTTCATATTTAGAATCAGCGAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860512 72 + 189454096 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGATAGAAA-TT-TGATTTCATATTTAGAATCAGCGAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241906 72 - 25927173 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGATAGAAA-TT-TGATTTCATATTTAGAATCAGCGAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276877 72 + 4669795 AACCCCTCATGAAATTTGGCCTGAATCTGTCAGTGGATAGAAA-TT-TGATTTCATATTTAGAATCAGCGTAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233433 72 + 135778131 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGATAGAAA-AT-TGATTTCATATTTAGAGTCAGCGTAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2663941 72 - 2847728 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGATAGAAA-TT-TGATTTCATATTTAGAATCAGTGTAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794276 72 + 2368649 CACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGAATAGAAA-AT-CGATTTCATATTTAGAATCAGTGTAAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561331 71 - 190850796 AACCCCTCATGAAATTTGGCCTGAATCTGTCAGTGGATAAAAC-AT-GGATTTTG-ATTTAGAATGGGCATAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046754 72 - 14256875 AACCCCTCATGAAATTTGGCCTGAATCTGTCAGTGGATAAAAA-AT-GGATTTCGTATTTAGAATGGGCATAAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935881 72 - 2196201 AAAGCCTCATGAAATTTGGCCTGAATCTGTCAGTGGATAAAAA-AT-GGATTTCATATTTAGAATGGGCATAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3328791 72 - 5030052 AACCCCTCATGAAATTTGGCCTGAATCTGCCAGTGGATAAAAA-AT-GGATTTTGTATTTAGAATGGGCATAAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17465794 73 - 93316391 AACCCCTCATGAAACTTGGCCTGAATCTGTCAGTGGAGAGAAAGAT-GGATTTCATATTTAGAACCAGCGTAAC i micMur3.chr14 I 161 I 284 s proCoq1.NW_012145301v1 3886898 73 + 3993831 AACCCCTCATAAAACTTGGCCTGAATTTGTCAGTGGAGAGAAAGAT-GGATTTCATATTTAGAACCAGCATAAC i proCoq1.NW_012145301v1 I 1618 C 0 s otoGar3.GL873580 11177544 73 - 11315646 AAGCTCTCACAAAACTTGGCCTGGATCCGTCAGTGGATAGAAAGAT-GGATTTCATATTTAGAACCAGAATAAC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16868033 72 - 59632846 AACCCCTCATGAAATTTGGCCTGAATCTGTCAGTGAATATAAAGAT-GGATTTCACA-TTAGAACCAGTATGAC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1361126 73 - 2520184 AAGCCCTCATGAAATTTGACTGGAATCTGTCAGTAGATAGAGA-ACAGGATTTCACATTCAGAAACAGCACAGG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86508807 1372 - 129401213 I a score=116985.000000 s hg38.chr4_KI270789v1_alt 29841 11 + 205944 TATTTGTTACA--- s panTro5.chr4 192822060 11 + 194502333 TATTTGTTACA--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706666 11 + 195804263 TATTTGTTACA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742496 11 + 4876863 TATTTGTTACA--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628178 11 + 115148730 TATTTGTTACA--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913142 11 + 190429646 TATTTGTTACA--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860584 11 + 189454096 TATTTGTTACA--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241978 5 - 25927173 TAttt--------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276949 11 + 4669795 TGTTTGTTACA--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233505 11 + 135778131 TATTTGTTACA--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664013 11 - 2847728 TATTTGTTACA--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794348 11 + 2368649 TATGTGTTACA--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561402 11 - 190850796 TATTTATTACA--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13046826 11 - 14256875 TATTTATTACT--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 935953 11 - 2196201 TATTTATTACA--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3328863 11 - 5030052 TATTTATTACA--- i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3886971 11 + 3993831 CATTGGTTACA--- i proCoq1.NW_012145301v1 C 0 I 242 s otoGar3.GL873580 11177617 11 - 11315646 CATGGATTACA--- i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16868105 11 - 59632846 CATTGGTTATA--- i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1361199 14 - 2520184 CATTGGTTACAAAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=89912.000000 s hg38.chr4_KI270789v1_alt 29852 11 + 205944 ATTTTCCAGAG----------------------------- s panTro5.chr4 192822071 11 + 194502333 ATTTTCCAGAG----------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706677 11 + 195804263 ATTTTCCAGAG----------------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742507 11 + 4876863 ATTTTCCAGAG----------------------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628189 11 + 115148730 ATTTTCCAGAG----------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913153 11 + 190429646 AGTTTCCAGAG----------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860595 11 + 189454096 AGTTTCCAGAG----------------------------- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3276960 11 + 4669795 AGTTTCCAGAG----------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233516 11 + 135778131 AGTTTCCAGAG----------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664024 11 - 2847728 AGTTTCCAGAG----------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794359 11 + 2368649 CGTTTCCAGAG----------------------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561413 11 - 190850796 ATTTTGCAGAA----------------------------- i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13046837 11 - 14256875 GTTTTGCAGAG----------------------------- i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 935964 11 - 2196201 AGTTTGCAGAG----------------------------- i cebCap1.NW_016107886v1 C 0 I 1474 s aotNan1.NW_018492112v1 3328874 11 - 5030052 ATTTTGCAGAG----------------------------- i aotNan1.NW_018492112v1 C 0 I 1352 s otoGar3.GL873580 11177631 11 - 11315646 ATTCTCCAGAG----------------------------- i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16868119 11 - 59632846 ATTTTCCAGTG----------------------------- i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1361213 40 - 2520184 ATTTTTCAGGAGACTTTGAATGTTTGAAATTACCAAGCAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I e macNem1.NW_012013133v1 24241983 0 - 25927173 C a score=17381.000000 s hg38.chr4_KI270789v1_alt 29863 2 + 205944 TG s panTro5.chr4 192822082 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706688 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742518 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628200 2 + 115148730 TG i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 188913164 2 + 190429646 TG i rheMac8.chr5 C 0 I 24 s macFas5.chr5 187860606 2 + 189454096 TG i macFas5.chr5 C 0 I 31 s cerAty1.NW_012001672v1 3276971 2 + 4669795 TG i cerAty1.NW_012001672v1 C 0 I 10 s chlSab2.chr7 134233527 2 + 135778131 TG i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012102221v1 2664035 2 - 2847728 TG i manLeu1.NW_012102221v1 C 0 I 4 s colAng1.NW_012116221v1 794370 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11177642 2 - 11315646 TG i otoGar3.GL873580 C 0 I 4610 s canFam3.chr16 16868130 2 - 59632846 TG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1361253 2 - 2520184 TG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189561424 2 - 190850796 I e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328885 1352 - 5030052 I e saiBol1.JH378165 13046848 2 - 14256875 I e macNem1.NW_012013133v1 24241983 0 - 25927173 C a score=43099.000000 s hg38.chr4_KI270789v1_alt 29865 9 + 205944 ttttttttt s panTro5.chr4 192822084 9 + 194502333 ttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706690 6 + 195804263 ---tttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742520 8 + 4876863 -tttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628204 9 + 115148730 tttttcttt i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 188913190 9 + 190429646 ttttttttt i rheMac8.chr5 I 24 C 0 s macFas5.chr5 187860639 9 + 189454096 ttttttgtt i macFas5.chr5 I 31 C 0 s macNem1.NW_012013133v1 24241983 2 - 25927173 -------tt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276983 9 + 4669795 ttttttttt i cerAty1.NW_012001672v1 I 10 C 0 s chlSab2.chr7 134233531 9 + 135778131 ttttttttt i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012102221v1 2664041 9 - 2847728 ttttttttt i manLeu1.NW_012102221v1 I 4 C 0 s colAng1.NW_012116221v1 794372 6 + 2368649 ---tttttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189561426 9 - 190850796 AGTTTTTTT i calJac3.chr3 I 2 I 1310 s saiBol1.JH378165 13046850 9 - 14256875 AGttttttt i saiBol1.JH378165 I 2 C 0 s canFam3.chr16 16868133 8 - 59632846 GGCTTTTT- i canFam3.chr16 I 1 I 5013 s dasNov3.JH570353 1361255 9 - 2520184 TTCTTTGTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328885 1352 - 5030052 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=23072.000000 s hg38.chr4_KI270789v1_alt 29874 4 + 205944 ttct s panTro5.chr4 192822093 4 + 194502333 ttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706696 4 + 195804263 ttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742528 4 + 4876863 ttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628213 4 + 115148730 tctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913199 4 + 190429646 tttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860648 4 + 189454096 tttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241985 4 - 25927173 tttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276992 4 + 4669795 ttgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233540 4 + 135778131 ttct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664050 4 - 2847728 tttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794378 4 + 2368649 tttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189562745 4 - 190850796 ttat i calJac3.chr3 I 1310 C 0 s saiBol1.JH378165 13046859 4 - 14256875 tttt i saiBol1.JH378165 C 0 I 1339 s dasNov3.JH570353 1361264 4 - 2520184 TTCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e canFam3.chr16 16868141 5013 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328885 1352 - 5030052 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=17416.000000 s hg38.chr4_KI270789v1_alt 29878 2 + 205944 tt s panTro5.chr4 192822097 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706700 2 + 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742532 2 + 4876863 tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628217 2 + 115148730 tt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913203 2 + 190429646 tt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860652 2 + 189454096 tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241989 2 - 25927173 tt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276996 2 + 4669795 tt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233544 2 + 135778131 tt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664054 2 - 2847728 tt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794382 2 + 2368649 tt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189562749 1 - 190850796 -t i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048202 2 - 14256875 TT i saiBol1.JH378165 I 1339 C 0 s dasNov3.JH570353 1361268 2 - 2520184 TT i dasNov3.JH570353 C 0 I 2886 e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e canFam3.chr16 16868141 5013 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328885 1352 - 5030052 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=151205.000000 s hg38.chr4_KI270789v1_alt 29880 24 + 205944 ggagactgagcctcgctctgtcca s panTro5.chr4 192822099 24 + 194502333 ggagactgagtctcactctgtcca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706702 24 + 195804263 ggagactgagtctcactctgtcca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742534 24 + 4876863 ggagactgagtctcgctctgtcca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628219 24 + 115148730 tgagaccgagtcttgctctgtctg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913205 24 + 190429646 tgagactgagtctcgctctgtcca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860654 24 + 189454096 tgagactgagtctcgctctgtcca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24241991 24 - 25927173 tgagactgagtctcgctctgtcca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3276998 24 + 4669795 tgagactgagtcttgctttgtcca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233546 24 + 135778131 tgagactgagtctcgctctgtcca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664056 24 - 2847728 tgagactgagtctcgctttgtcca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794384 24 + 2368649 ggagactgagtcttgctctgtcca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189562750 22 - 190850796 tgagatggagtctcactctgtt-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048204 22 - 14256875 GGGgatggagcctcactctgtt-- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e dasNov3.JH570353 1361270 2886 - 2520184 I e canFam3.chr16 16868141 5013 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e aotNan1.NW_018492112v1 3328885 1352 - 5030052 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=848020.000000 s hg38.chr4_KI270789v1_alt 29904 108 + 205944 gcccaggctggaatgcagtggtgtgatctccgctcactgcaacctctgcctccaggattcaagcaattct-ctgcctgagcctcctgagtatctgggattacaggtgtc s panTro5.chr4 192822123 108 + 194502333 gcccaggctggaatgcagtggtgtgatctccactcactgcaacctctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgtc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706726 108 + 195804263 gcccaggctggaatgcagtggtgtgatctccactcactgcaacctctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgtc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742558 108 + 4876863 gcccaggctggaatgcagtggtgtgatctccgctcactgcaacctctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628243 108 + 115148730 tcccgggctggagtgcagtggtgtgatctcggctcactgcaacctccgcctccagggttcaagcagttct-ttgcctcagcctcctgagtatctgggattacaggtgcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913229 108 + 190429646 gtccaggttggggtgcagtggtgcgatcctggttcactgcatcccctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860678 108 + 189454096 gtccaggttggggtgcagtggtgcgatcttggttcactgcaacccctgcctccagggttcaagcaattct-ctgcctcagtctcctgagtatctgggattacaggtgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242015 108 - 25927173 gtccaggttggggtgcagtggtgcgatcttggttcactgcaacccctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277022 108 + 4669795 gtccaggttggggtgcagtggtgcgatcttggttcactgcaacccctgcctccagggttcaagcaattct-ctgcctcagcctcctgaatatctgggattacaggtgcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233570 108 + 135778131 gtccagggtggagtgcagtggtgcgatctcggctcactgcaacctctgcctccagggttcaagcaattct-ctgcctcagcctcctgagtatctgggattacaggtgcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664080 108 - 2847728 gtccaggttggggtgcagtggtgcgatcttggttcactgcaacccctgcctccagggttcaagcaattct-ctgcctcagcctcctgaatatctgggattacaggtgcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794408 108 + 2368649 gtccaggtcggggtgcagtggtgcgatcttggttcactgcaacctctgcctccagggttcaagcaattct-ctgcctcagccgcctgagtatctgggattacaggtgcc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189562772 109 - 190850796 gcccagcctgaagtgcagtggctccatctcagcacactgcaaactccacctcccaggttcaagtgattctcctgcctcagcctcccaagttgctgagactacagatgca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048226 109 - 14256875 gcccagcctgaagtgcagtggctccatctcagcacattgcaacctccacctccaaggttcaagtgattcccctgcctcagcctcccaaattgctgagactacagatgca i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3330237 109 - 5030052 gcccagcctgaagtgcagtggctcgatctcagcacattgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagttgctgagactacagatgca i aotNan1.NW_018492112v1 I 1352 C 0 e cebCap1.NW_016107886v1 935975 1474 - 2196201 I e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e dasNov3.JH570353 1361270 2886 - 2520184 I e canFam3.chr16 16868141 5013 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=1430019.000000 s hg38.chr4_KI270789v1_alt 30012 154 + 205944 cgccaccatgcccggctaatttttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccactttggcctcccaaagtgctggaattacaggcatgagccactgtgcccagcc s panTro5.chr4 192822231 154 + 194502333 cgccaccatgcccggctaatttttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccactttggcctcccaaattgctgagattacaggcatgagccactgcgcctggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706834 154 + 195804263 cgccaccatgcccggctaatttttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccactttggcctcccaaattgctgagattacaggcatgagccactgcgcctggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742666 154 + 4876863 cgccaccatgcccggctgatttttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccactttggcctcccaaagttctgggattacaggcatgagccactgcgcccggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628351 153 + 115148730 tgccaccacgcctggctaatttttttgtatttttagtagagatggagtttcaccatgttggccaggctggtctcgaactccggacctcaggtgatccacccactttggcctcccaaagtgctgggattacaggcatgagccactgcgcctggc- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913337 154 + 190429646 cgccaccacgcctggctaatttttttgtatttttagtagagatggggtttcgccgtgttggccaggctggtctcaaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgaaccactgcacccagcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860786 153 + 189454096 cgccaccacgcctggctaa-ctttttgtatttttagtagagatggggtttcgccgtgttggccaggctggtctccaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggcgtgagccactgcacccagcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242123 154 - 25927173 cgccaccacgcctggctaatttttttgtatttttagtagagatggggtttcgccgtgttggccaggctggtctcaagctcctgacctcaggtgatcaacccaccttggcctcccaaagtgctgggattacaggcatgagccactgcacccagcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277130 154 + 4669795 cgccaccacgcctggctaatttttttgtatttttagtagagatggggtttcgccgtgttggccagggtggtctcaaggtcctgatctcaggtgatcaacccaccttggcctcccaaagtgctgggattacaggcatgagccactgtacccagcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233678 154 + 135778131 cgccaccacgcctggctaatttttttgtatttttagtagagatggggtttcactgtgttggccaggatggtctcgacctcctgaccttaggtgatcaacccaccttggcctcccaaagtgctgggattacaggcatgagccactgcatccagcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664188 154 - 2847728 cgccaccacgcctggctaatttttttgtatttttagtagagatggggtttcgccgtgttggccaggctgttctcaagctcctgacctcaggtgatcaacccaccttggcctcccaaagtgctgggattacaggcatgagccactgtacccagcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794516 154 + 2368649 cgccaccacacctggctaatttttttgtatttttagtagagatggggtttcaccgtgttggccaggctggtctcgagctcctgacctcaggtgatcaacccaccttggcctccgaaagtgctgggattacaggcatgagccactgtacccagcc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189562881 151 - 190850796 caccaccacgcccagcaaa---ttttgtatttttagtagagacagggtttcactatgttggccaggctggtcttgaattcctgacctcaggtgatccacccgcctcagcctcccaaagtgctggggttacaggcgtgagccacggcgccAGACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048335 151 - 14256875 tgccaccacacccagatga---ttttgtatttttagtagagatggggtttcactatgttggccaggctggtcttgaagtcctgacctcaggtgatccacctgcctcggcctcccaaagtgctggggttacaggtatcagccacggggccAGACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937449 151 - 2196201 cgccaccacgcccagctaa---ttttgtatttttagtagagacagggtttcactatgttggccagactggtcttgaattcctgacctcaggtgatccacccacctcggcctcccaaagtgctggggttacaggtgtgagccacggcaccAGACT i cebCap1.NW_016107886v1 I 1474 C 0 s aotNan1.NW_018492112v1 3330346 151 - 5030052 cgccaccacgcccagctaa---ttttgtattgttagtagagacagcgtttcactatgttggccaggctggtcttgaattcctaacctcaggcaatccacctgcctcggcctcccaaagtgctggggttagaggtgtgagccacggcgccAGACT i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e dasNov3.JH570353 1361270 2886 - 2520184 I e canFam3.chr16 16868141 5013 - 59632846 I e mm10.chr8 86508807 1372 - 129401213 I e otoGar3.GL873580 11177644 4610 - 11315646 I a score=65858.000000 s hg38.chr4_KI270789v1_alt 30166 5 + 205944 TCTCA s panTro5.chr4 192822385 5 + 194502333 TCTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706988 5 + 195804263 TCTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742820 5 + 4876863 TCTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628504 4 + 115148730 -cTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913491 5 + 190429646 TCTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860939 5 + 189454096 TCTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242277 5 - 25927173 TCTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277284 5 + 4669795 TCTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233832 5 + 135778131 TCTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664342 5 - 2847728 TCTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794670 5 + 2368649 TCTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563032 5 - 190850796 TCTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048486 5 - 14256875 TCTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937600 5 - 2196201 TCTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330497 5 - 5030052 TCTCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11182254 5 - 11315646 TCTCA i otoGar3.GL873580 I 4610 C 0 s canFam3.chr16 16873154 5 - 59632846 TTTCA i canFam3.chr16 I 5013 C 0 e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e dasNov3.JH570353 1361270 2886 - 2520184 I e mm10.chr8 86508807 1372 - 129401213 I a score=1820341.000000 s hg38.chr4_KI270789v1_alt 30171 170 + 205944 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAAT-TATCATT-AGGA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACATCACATTACTTTATTGTTACTAGTTTCTGTGAATGTGTCTTATCTTTTAAATTAAATCCAAAGCTCTT s panTro5.chr4 192822390 168 + 194502333 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAAT-TATCATT-AGGA-GGGTAATCAGACAACTTAGATG-T-TACAAT--CTATAC-TAGTCACATCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192706993 168 + 195804263 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAAT-TATCATT-AGGA-GGGTAATCAGACAACTTAGATG-T-TACAAT--CTATAC-TAGTCACATCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742825 170 + 4876863 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAAT-TATCATT-AGGA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACATCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628508 164 + 115148730 ATGTTCTTGATATTATATATACTTGTATTTTCTTTGTATTTGAAA--TATCATT-AGAA-TGGTAATCAGACAACGTAGATG-T-TACAATATCTATAC-TAATCACATCACATTACTTTATTGCTACTAGTTTCTGTGAATGTGTCTTATCTTTTAAATT-----CAAAGCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913496 169 + 190429646 ATATTCTTGATATTATATGTACGTGTATTTTCTTTGTATTTGAAA--TGTCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACGTCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187860944 169 + 189454096 ATATTCTTGATATTATATGTACGTGTATTTTCTTTGTATTTGAAA--TGTCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACGTCACATTACTTTATTGTTACTAGTTTCTGTGAATGTGTCTTATCTTTTAAATTAAATCCAAAGCTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242282 161 - 25927173 ATATTCTTGATATTATATGTACGTGTATTTTCTTTGTATTTGAAA--CGTCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACATTATCTATAC-TAATCACGTCACATTAc--------tactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277289 169 + 4669795 ATATTCTTGATATTATATGTACGTGTATTTTCTTTGTATTTGAAA--TGTCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACGTCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134233837 169 + 135778131 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAA--TATCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAGTATCTATAC-TAATCACGTCACATTACTTTATTGTTACTAGTTTCTGTGAATGTGTCTTATCTTTTAAATTAAATCCAAAGCTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664347 169 - 2847728 ATATTCTTGATATTATATGTACGTGTATTTTCTTTGTATTTGAAA--TGTCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAATATCTATAC-TAATCACGTCACATTACTTtattgttactagtttctgtgaatgtgtcttatcttttaaattaaatccaaagctctt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794675 165 + 2368649 ATATTCTTGATATTATATGTACTTGTATTTTCTTTGTATTTGAAA--TATCATT-AGAA-TGGTAATCAGACAACTTAGATG-T-TACAATAGCTATAC-TAATCACATCACATTACTTTATTGTTACTAGTTTCTGTGAATGTGTCT----TTTAAATTTAAATCCAAAGCTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563037 168 - 190850796 CTGTTCTTGATATTCTACGTCTTTGCA-TTTCTCTGTATTTGAAA--TGTCATT-AGAA-TAATAGTTACATAACGTAGGTG-T-CACGACACCTATAC-TAATCACACCACATCACTTTATTGTTACTAATTTCTGTGACTGTGTCTTAGCTTTTAAATTAAATTCAAAGCCCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048491 168 - 14256875 CTATTCTTGATATTACATGTACTTTTA-TTTCTCTGTATTTGAAA--CATCATT-AGAA-TAGTAGTCATATAACTTAGGTG-T-CACGATATGTATAC-TAATCACATCACATTACTTTATTGTTACTAATTTCTGTGAATCTGTCTTATCTTTTAAATTAAATCCAAAGCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937605 168 - 2196201 CTATTCTTGATATTATATGTACTTGTA-TTTCTCTGTATTTGAAA--TATCATT-AGAA-TAGTAGTCATATAGCTTAGGTG-T-CACGATACCTATAC-GAATCACATCACATTACTTTATTGTTACTAATTTCTGTGAATGTGTCTTATCTTTTAAATTAAATCCAAAGCTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330502 168 - 5030052 CTATTCTTGATAGTATATGTACTTGTA-TTTCTCTGTATTTGAAA--TATCAGT-AGAA-CAGTAGTCATATAACTTAGGTG-T-CACGATACCTATAC-AAATCACATCACATTACTTTGTTGTTACTAATTTCTGTGAATGTGTCTTGTCTTTTAAATTAAATCCAAATCTCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11182259 171 - 11315646 CAACTCTTCGTATTATGTGTCTTTGTATTTTCTCTGTATTTCAAG--TATCATCAAAAA-TGATAATCATATAACTCACATGAT-AACAATTTCTGGGCATAATCATGGGCTATCACTTTGATGTTGGCTGTTTCAGTGAATGTATCTTATTTTTTAAACTTAAT-CACAACTTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873159 151 - 59632846 CTACTATTGATACTGTAT-----TGTATTTTC----TATTTCAAGTATATCATC-ATAAGTGGTATTT-------TTATATG-TATATAGTTTTTAAATATAATCACATGCCATTACTTTGTTG-------TTTCAATAAATATACCTTATCTTTTTAATTAAGCCCCAAGCTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364156 165 - 2520184 ATATTATTGATATTGTATATACTTGTATTTTCTCTCCATTTCAAA--AATCCTA-AAAA-TGGTAATTATATAACCTACCTG-T-TGTAATTTGTGTAA-----CACATGCTATTACTTTAGGATTATTTGCTTCAGTGAATAATTCTTTTATTTTTTATTAAACCCCACACTCTT i dasNov3.JH570353 I 2886 C 0 e proCoq1.NW_012145301v1 3886982 242 + 3993831 I e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=80991.000000 s hg38.chr4_KI270789v1_alt 30341 5 + 205944 TGAGC s panTro5.chr4 192822558 5 + 194502333 tgagc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707161 5 + 195804263 tgagc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3742995 5 + 4876863 tgagc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628672 5 + 115148730 TGAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913665 5 + 190429646 tgagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861113 5 + 189454096 TGAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242443 5 - 25927173 tgagc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277458 5 + 4669795 tgagc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134234006 5 + 135778131 TGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664516 5 - 2847728 tgagc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794840 5 + 2368649 TGAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563205 5 - 190850796 TGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048659 5 - 14256875 TGAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937773 5 - 2196201 TGAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330670 5 - 5030052 TGAGC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3887224 5 + 3993831 TGAGC i proCoq1.NW_012145301v1 I 242 C 0 s otoGar3.GL873580 11182430 5 - 11315646 TGAAC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873310 5 - 59632846 TGAGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364321 5 - 2520184 TGAGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17465867 284 - 93316391 I e mm10.chr8 86508807 1372 - 129401213 I a score=1017443.000000 s hg38.chr4_KI270789v1_alt 30346 70 + 205944 CAGAAACTTTGTCTTGTATGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCGTTCTTTC s panTro5.chr4 192822563 70 + 194502333 cagaaactttgtcttgtaTGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCGTTCTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707166 70 + 195804263 cagaaactttgtcttgtaTGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAACTGAGTGACTCGTTCTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743000 70 + 4876863 cagaaactttgtcttgtaTGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCGTTCTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628677 70 + 115148730 CAGAAACTTTGTCTTGTATGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCGTTCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913670 70 + 190429646 cagaaactttgtcttgtaTGAGGTTTGCTATGTAAA--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861118 70 + 189454096 CAGAAACTTTGTCTTGTATGAGGTTTGCTATGTAAA--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242448 70 - 25927173 cagaaactttgtcttgtaTGAGGTTTGCTATGTAAA--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277463 70 + 4669795 cagaaactttgtcttgtaTGAGGTTTGCTGTGTAAG--TATTTGGAG-G--GGAAATTGAGTGACTCATTCTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134234011 70 + 135778131 CAGAAACTTTGTCTTGTATGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664521 70 - 2847728 cagaaactttgtcttgtaTGAGGTTTGCTGTGTAAG--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794845 70 + 2368649 CAGAAACTTTGTCTTGTATGAGGTTTGCTATATAAG--TATTTGGAG-G--GAAAATTGAGTGACTCATTCTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563210 70 - 190850796 CAGAACCTTTGTCTTGTGTGAGGTATGCTGTATACATGTGTTTGGA-----GAAAACTGAGTCACTGGCTTTTTC i calJac3.chr3 C 0 I 384 s saiBol1.JH378165 13048664 72 - 14256875 CAGAACCTTTGTCTTGTATGAGGTATGCTATATACTTGTGTTTGGAG-G--GAAAATTGAGTGATGCATTTTTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937778 72 - 2196201 CAGAGCCTTTGTCTTGTATGAGGTATGCTGTATACGTGTGTTTGGAG-G--GAAAATTGAGCGACTTGTTTTTTT i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3330675 70 - 5030052 CAGAACCTTTGTCTTGTATGAAGTATGCTATATACA--TGTTTGGAG-G--GAAAATTGAGTGACTCGTTTTTTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466151 70 - 93316391 CAGAAACTTTGTCTTGTGTGATGCTCGCTATATAAA--TATTTGGAG-G--AGGAATTGAATGAATCATTCTTTC i micMur3.chr14 I 284 C 0 s proCoq1.NW_012145301v1 3887229 70 + 3993831 CAGAAACTTTGTCTTGTGTGATGCTCGCTATATAAA--TATTTGGAG-G--GAGAATTGAATGAATCATTCTTTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11182435 70 - 11315646 TAGGAACTTTGTCTCGTGTGACGCTTGCTAGATAAA--TATTTGGAG-G--GAATACTGTATGCATCATGCTTTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873315 72 - 59632846 CAGGCACCTTGTCTTGTATGATACTTGTTCTATACA--AGTTTGGAG-GAAAAAAAATGAGTGAATCATTCTTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364326 71 - 2520184 CAGAATCTTTGTCTTATGTGATGCTTGCTATGTAAA--TATTTTGAGAG--AAAAACTGAATGAGTCATTCTGTC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86508807 1372 - 129401213 I a score=46750.000000 s hg38.chr4_KI270789v1_alt 30416 4 + 205944 GTAA s panTro5.chr4 192822633 4 + 194502333 GTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707236 4 + 195804263 GTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743070 4 + 4876863 GTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628747 4 + 115148730 GTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913740 4 + 190429646 ATGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861188 4 + 189454096 ATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242518 4 - 25927173 ATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277533 4 + 4669795 ATAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134234081 4 + 135778131 ATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664591 4 - 2847728 ATAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794915 4 + 2368649 ATAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13048736 4 - 14256875 ATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937851 4 - 2196201 ATAA i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3330745 4 - 5030052 ATAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466221 4 - 93316391 ATAA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3887299 4 + 3993831 ATAA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11182505 4 - 11315646 GTGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873387 4 - 59632846 AGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364397 4 - 2520184 ACAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189563280 384 - 190850796 I e mm10.chr8 86508807 1372 - 129401213 I a score=2073596.000000 s hg38.chr4_KI270789v1_alt 30420 158 + 205944 AACTGTT---AT---ATCGGAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACTGGAGTTCGATCTCCAAATAATGCGGGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttattgaattcacttt s panTro5.chr4 192822637 158 + 194502333 AACTGTT---AT---ATCGGAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACTGGAGTTCGATCTCCAAATAGTGTGGGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttattgaattcacttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707240 158 + 195804263 AACTGTT---AT---ATCGGAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACTGGAGTTCGATCTCCAAATAGTGTGGGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttattgaattcacttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743074 158 + 4876863 AACTGTT---AC---ATCGGAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACTGGAGATCGATCTCCAGATAGTgcaggttgattaagttccattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattCACTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628751 158 + 115148730 AACTGTT---AT---ATCGGAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACTGGAGTTTGATCTCCAGATAGTGAGGGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattcacttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913744 158 + 190429646 AACTGTT---AT---ATCAAAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACGGGGGTTCAATCTCCAAATAGTGCGTGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattcacttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861192 158 + 189454096 AACTGTT---AT---ATCAAAACACCA--CAACTTCATGAAAAC-ACATTAACTAGAAGTTATTACACGGCGGTTCAATCTCCAAATAGTGCATGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattcacttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242522 158 - 25927173 AACTGTT---AT---ATCAAAACACCA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACGGGGGTTCAATCTCCAAATAGTGCATGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattcacttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277537 158 + 4669795 AACTGTT---GT---ATCAAAACACCA--CAGCTTCATGAAAAC-ACATTAATTAGAAGTTATTACACGGAGGTTCAATCTCCAAATAGTGCATGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----tttatttaattcacttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134234085 158 + 135778131 AACTGTT---AT---ATCAAAACACTA--CAGCTTCATGAAAAC-ACATTAACTAGAAGTTATTACACAGGGGTTCAATCTCCAAATAGTGCACGTTGATTAAGTTCCattagctctgtggctttaagcaagttcgctacttctcaagac----cttatttaattcactct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664595 158 - 2847728 AACTGTT---AT---ATCAAAACACCA--CAGCTTCATGAAAAC-ACATTAATTAGAAGTTATTACACGGGGGTTCAATCTCCAAGTAGTGCATGTTGATTAAGTTCCattagctctgtggctttaagcaagttccctacttctcaagac----cttatttaattcacttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 794919 158 + 2368649 AACTGTT---AT---ATCAAAACACCA--CCGCTTCATGAAAAC-ACATCAACTAGAAGTTATTACACGGGGGTTCAATATCCAAATAGTGCACGTTGATTAAGTTCCATTAGCTCTGTGGCTTTAAGCAAGTTCCCTATTTCTCAAGAC----CTTATTTAATTCACTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563664 157 - 190850796 AACTGGT---AC---ACTGAAATACCA--TGGCTTCATGAAAAC-ACAATAACCAGAAGTTATTACACCGGACCTCCGTCTCCATGGAGCACGGGTTGGTTAATTTCCATTATCTCCGTGGCTTTCAGGATGTTCCCTGCTTTTCAAGAC----C-TATTTAGTTCACTTT i calJac3.chr3 I 384 C 0 s saiBol1.JH378165 13048740 156 - 14256875 AACTGGT---AC---ACTGAAATACCA--TTGCTTCATGAAAAC-ACGTTAACCAGAAGTTACTATCCCGGAGCTCCATCTCCATAGAGTGCGGGTTGGTTAATTTCCATTAGCTCTGTGGCTTTAAGG--GTTTCCTATTTTTCAAGAC----CTTATGTAATTCACTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 937855 158 - 2196201 AACTGGT---AC---ATTGAAATACCA--TGGCTTCATGAAAAC-ACACTAACCAGAAGTTACTACACCGGAGCTCCATCTCCAAAGACTGCAGGTTGGTTAATTTCCattagctctgtggcgttaaggaagttgtctgcttttcaagac----cttatttaactcacttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330749 158 - 5030052 AACTGGT---AC---ATTGAAATACCA--TGGTTTCATGAAAAC-ACATTAACCAGAAGTTATTATGCTGGAGCTCCATCTCTAAAGAGTGCGGGTTAGTTAATTTCCattagctctgtggctttaaggaagttccctacttttcaagac----cttatttaattcacttt i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466225 163 - 93316391 AACTATTATGAT---ATCAAAATACTA--TAGCTTTATGGAAAC-ACATTAACTAGAAATTATTACACTGGAGTTCAACCTC--AGTTGTGCTGGTTGATTAAGTTCAATTAGCTCTGTGGCATTAAGTGAGTTATCTGCTTTCCAAAACTTAACTCACTTAACTCACTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3887303 159 + 3993831 AACTATTATGAT---ATCAAAATATTA--TAGCTTTGTGAAAAC-ACATTAACGAGAAGTTATTACACTGGAGTTCAACCTC--AGTAGTGCTGGTTGATTAAGTTCAattagctctgtggcattaagtgagttacctacgtttcaaaat----cttacttaacttacttt i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11182509 159 - 11315646 AACTGTTCTGAT---ATCAAAATCTTA--TAGCTTCATAGGAAA-ACATCATCTAGACATTAATACGCTGGAGTTCAACCAC--AACAGAGCTGGTTGATTAAGTTCAGTtagctctgtggcgttaagcaagttacttacttttcaagac----tttacttaactcattat i otoGar3.GL873580 C 0 I 282 s canFam3.chr16 16873391 160 - 59632846 AACTATT---AT---GTAATAAAAATAagtagctcattgaaaacaacattaccttggagttactacactggagttcagcctcc-attagtgctatttgattaacttcagttagctccataggtttaggtgaattacctacttctctaggc----ctttggttactcatttt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364401 153 - 2520184 AATTATT---ATGGAATCAAAATA-----TAGCTTTATGAAAACAACATTAACTCAGAATAACTACACCAAAGTTTAAGCTCCAAACCAT-----TAAACTATCTTCAAAAAGTTCTACGGc-ttaagcaagtcacttatttctccagac----ctgactttactcatttt i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86508807 1372 - 129401213 I a score=641626.000000 s hg38.chr4_KI270789v1_alt 30578 47 + 205944 acaatagggTGACTGGGTCAGGTGATGTCTCCAGTATTCTCCCTTTT s panTro5.chr4 192822795 47 + 194502333 acaatagggtgactgggtcaggtgatgtctCCAGTATTCTCCCTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707398 41 + 195804263 acaatagggtgactgggtca------gTCTCCAGTATTCTCCCTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743232 47 + 4876863 ACAATAGGGTGACTGGGTCAGGTGATGTCTCCAGTATTCTCCCTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628909 47 + 115148730 acaatagggTGACTGGGTCAGGTGATGTCTCCAGTATTCTCCCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913902 47 + 190429646 acaacagggtgactgggtcaggtgacgtctccaatattctccctttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861350 47 + 189454096 acaacagggtgactgggtcaggtgacgtctCCAGTATTCTCCCTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242680 47 - 25927173 acaacagggtgactgggtcaggtgacgtctCCAGTATTCTCCCTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277695 47 + 4669795 acaacagggtgactgggtcaggtgacgtctCCAGTATTCTCCCTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134234243 47 + 135778131 acaatagggtgactgggtcaggtgacgtctCCAGTATTCTCCCTTTG i chlSab2.chr7 C 0 I 844 s manLeu1.NW_012102221v1 2664753 47 - 2847728 acaacagggtgactgggtcaggtgacatctCCAGTATTCTCCCTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795077 47 + 2368649 ACAGTAGGGTGACTGGGTCAGGTGACGTCTCCAGTATTCTCACTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563821 47 - 190850796 ACAGTAGGGTGACTGGATTCGGTGATGTCTGTAGTAGTCTCCCTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048896 47 - 14256875 ACAATAGGGTGACTGGATTAGGTGATGTCTGTGGTTTTCTCCCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938013 47 - 2196201 acaatagggtgactggattaggtgatgtctgtggttttctccCTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330907 47 - 5030052 acaatagggtgactggattaggtgatgtctGTAGTATTCTCCCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466388 47 - 93316391 AAAATAAGTTGATTTGGTCAGGTAATGTCTCAAGTATGCTTACTTTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3887462 47 + 3993831 aaaatagggTGATTTGGTCAGGTAATGTCTCAAGTATCCTTACTTTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11182950 47 - 11315646 aaaatagggtgatttggtcaggtaatgtctcaagtatccctactttt i otoGar3.GL873580 I 282 C 0 s canFam3.chr16 16873551 47 - 59632846 agaatgaggtcatttggttggattatgtctaaagtgtctttcctttt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364554 47 - 2520184 aaaatgggatcatttggtgaggtgatctgtaaagtctcatcACTTTA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86508807 1372 - 129401213 I a score=1214475.000000 s hg38.chr4_KI270789v1_alt 30625 92 + 205944 AAAGTTATATCACTTTTCAAAAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCGAAGTCTGAATTTGCCCAAGTACCAAAGAAAGGCTAA s panTro5.chr4 192822842 92 + 194502333 AAAGTTATATCACTTTTCAAAAAGAAAGTCTGTTCTAAGAAAGAAAA---------------TATGACTCGAAGTCTGAATTTGCCCAAATACTAAAGAAAGGCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707439 92 + 195804263 AAAGTTATATCACTTTTCAAAAAGAAAGTCTGTTCTAAGAAAGAAAA---------------TATGACTCGAAGTCTGAATTTGCCCAAATACTAAAGAAAGGCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743279 92 + 4876863 AAAGTTATATCACTTTTCAAAAAAAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCGAAGTCTGAATTTGCCCAAATACTAAAGAAAGGCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112628956 92 + 115148730 AAAGTTATATCACTTTTCAAAAAGAAAGTCTACTCTAAGAAAGAAAA---------------TACGACTTGAAGTCTGAATTTGCCCAAATACAAAAGAAAGGCTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188913949 92 + 190429646 aAAGTTGTATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTGCCCAAATACAAAACAGAGGTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861397 92 + 189454096 AAAGTTGTATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTGCCCAAATACAAAACAGAGGTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242727 92 - 25927173 AAAGTTGTATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTGCCCAAATACAAAACAGAGGTGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277742 92 + 4669795 AAAGTTGTATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTGCCCAAATACAAAACAGAGGTGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235134 86 + 135778131 AAAGTTACATCACTTTTCAATAAGAAAGTCTATTCT----AAGAAAA---------------TATGACTCAAAGTCTGAATTTGCTCAAATACAAAAC--AGGTGAA i chlSab2.chr7 I 844 C 0 s manLeu1.NW_012102221v1 2664800 92 - 2847728 AAAGTTGTATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTGCCCAAATACAAAACAGAGGTGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795124 92 + 2368649 AAAGTTATATCACTTTTCAATAAGAAAGTCTATTCTAAGAAAGAAAA---------------TATGACTCAAAGTCTGAATTTACCCAAGTACAAAACAGAGGCGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563868 90 - 190850796 AAAGTTATAGCACTTTTCAAAAAGCAAGTCTATTCTGAGAAAGAAAA---------------T--GACTCACAATCTGAATTTGCCCAAATATAAAAGAGAGGTTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13048943 90 - 14256875 AAAGTTATATCACTTTTCAAAAAGCAAGTCTATTCTGAGAAAGAAAA---------------T--GACTCAAAATCTGAATTTGCCCAAATGCAAAAGAGAGGTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938060 90 - 2196201 AAAGTTATATCACTTTTCCAAAAGCAAGTCTATTCTGAGAAAGAAAA---------------T--GACTCAAAATCTGAATTTGCCCAAATGCAAAAGAGAGGTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3330954 90 - 5030052 AAAGTTATATCACTTTTCAAAAAGCAAGTGTATTCTGAGAAAGAAAA---------------T--GACTCAAAATCTGAATTTGCCCAAATACAAAAGAGAGGTTAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466435 90 - 93316391 AATATTATATGA-CTCTCAAAAAGAAAGCCTATTTCAGAAAA-AAAA---------------TATGACTCAAAATCTGCATTTGCCCCAATACAAAAGAGAAACTAA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3887509 91 + 3993831 AGAATTATATAA-TTCTCAAAAAGAAAGTCTATTCCAGAAAAGAAAA---------------TATGACTCAAAATCTGGATTTGCCCAAATACAAAAGAGAAACTAA i proCoq1.NW_012145301v1 C 0 I 29 s otoGar3.GL873580 11182997 104 - 11315646 aaaattgtataa-ttttCAAAAAGAAAGTCTGCTGCAGAAAAGAAAATATAGAAAATACATGTATAACTC--AATCTAAATTTGCCCAACAACAAAAGAAAGACTAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873598 91 - 59632846 aatattatattactttTGAAAAATAAAGTCTTTCATAAAGAAAAAGA----------------ATAGCTCAAAATCCAAATTTGCTCAAATATAAAAAAAGGACTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364601 92 - 2520184 CAAATTATTTAAGTTTTCAAAAATAAATTTTATTCTAGAAAAGAAAG---------------TATAGTTCAAAATCTGGATTTCCTCTAATAAAGAAAAGGGACTAA i dasNov3.JH570353 C 0 I 1 e mm10.chr8 86508807 1372 - 129401213 I a score=325485.000000 s hg38.chr4_KI270789v1_alt 30717 30 + 205944 AGTTAAAG--------C--------AAATCTTATTCATAGAGAGCA s panTro5.chr4 192822934 30 + 194502333 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707531 30 + 195804263 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743371 30 + 4876863 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629048 30 + 115148730 AGTTAAAG--------C--------AAGTCTTATTCATAAAGAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914041 30 + 190429646 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861489 30 + 189454096 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242819 30 - 25927173 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277834 30 + 4669795 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235220 30 + 135778131 AGTTAAAG--------C--------AAATCTTACACGTAAAGAGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664892 30 - 2847728 AGTTAAAG--------C--------AAATCTTATTCATAAAGAGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795216 30 + 2368649 AGTTAAAG--------C--------AAATCTTATTCGTAAAGAGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563958 30 - 190850796 AGTTAAAG--------C--------AAATCTTATGCATGAAGACTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049033 30 - 14256875 AGTTGAAG--------C--------AAATCTTACTCACGAAGAGTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938150 26 - 2196201 AGTGGAAG--------C--------AAATCTT----ATGAAGAGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331044 30 - 5030052 AGTTAAAG--------C--------AAATCTTATTCATGAAGAGTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466525 23 - 93316391 -------G--------C--------AAGTCTTATTCACAAGGATCT i micMur3.chr14 C 0 I 1 s otoGar3.GL873580 11183101 29 - 11315646 -ATCACTT--------C--------CAGTCTTAGTCACAATATCCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873689 37 - 59632846 -GTTAAAT--------CATCACTTGAAGGCTTCTTCATAAAAAGCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364694 37 - 2520184 AGTTAAGGAATTGTTTC--------AAGTCTTATTCAGAAAGAGC- i dasNov3.JH570353 I 1 C 0 e proCoq1.NW_012145301v1 3887600 29 + 3993831 I e mm10.chr8 86508807 1372 - 129401213 I a score=2625930.000000 s hg38.chr4_KI270789v1_alt 30747 208 + 205944 CTAGTAAATC-TATTTC-TTTTTGATGCTTGA-ATGTTTTC----TATGCTGGAATGTTCTTGGTACATATTAGGTTATAAAATGACTCATCTTTAGGACATTTCAGTGCCTGAGGGTATTTTCTTTGTAATCCATGTATTGAAATTTGACTCTTGATAG-CACATGCCAAG-CACATAGTTCCATAATATGATTTTTT-AAAATTACAGATAATGAA s panTro5.chr4 192822964 208 + 194502333 CTAGTAAATC-TATTTC-TTTTTGATGCTTGA-ATGTTTTC----TATGCTGGAATGTTCTTGGTACATATTAGGTTATAAAATGACTCATCTTTAGGACATTTCAGTGCCTGAGGGTATTTTCTTTGTAATCCATGTATTGAAATTTGACTCTTGATAG-CACATGCCAAG-CACATAGTTCCATAATATGATTTTTT-AAAATTACAGATAATGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707561 208 + 195804263 CTAGTAAATC-TATTTC-TTTTTGATGCTTGA-ATGTTTTC----TATGCTGGAATGTTCTTGGTACATATTAGGTTATAAAATGACTCATCTTTAGGACATTTCAGTGCCTGAGGGTATTTTCTTTGTAATCCATGTATTGAAATTTGACTCTTGATAG-CACATGCCAAG-CACATAGTTCCATAATATGATTTTTT-AAAATTACAGATAATGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743401 208 + 4876863 CTAGTAAATC-TATTTC-TTTTTGATGCTCGA-ATGTTTTC----TATGCTGGAATGTTCTGGGTACATATTAGGTTATAAAATGACTCATCTTTAGGACATTTCAGTGCCTGAGGGTATTTTCTTTGTAATGCACGTATTGAAATTTGACTCTTGATAG-CACATGCCAAG-CACATAGTTCCATAATATGATTTTTT-AAAATTACAGATAATGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629078 208 + 115148730 CTGGTAAATC-TATTCC-TTTTTGATGCTTGA-ATGTTTTC----TATGCTTGAGTGTTCTGGGTACATATTAGGTTATAAAATGACTCATCTTGAGGACATTTCGGTGCCTGAGGACATTTTCTTGGTAATCCACGTATTGAAATTTGACTCTTGATAG-CACATGCCAGG-CACATAATTCCATAATATGGTTTTTT-AAAATTACAGATAATTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914071 204 + 190429646 CTATTAAATC-AATTCC-TTTTTGATGCTTGA-ACGTTTTC----TCTGCTTGAATGTTCTGGGTACATATCAGGTTATAAAACGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCATGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATACGATTTTTA-AAAATCATAGAT----AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861519 204 + 189454096 CTATTAAATC-AATTCC-TTTTTGATGCTTGA-ACGTTTTC----TCTGCTTGAATGTTCTGGGTACATATCAGGTTATAAAACGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCATGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATACGATTTTTA-AAAATTATAGAT----AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24242849 204 - 25927173 CTATTAAATC-AATTCC-TTTTTGATGCTTGA-ACGTTTTC----TCTGCTTGAATGTTCTGGGTACATATCAGGTTATAAAACGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCATGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATACGATTTTTA-AAAATTATAGAT----AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3277864 204 + 4669795 CTATTAAATC-AATTCC-TTTTTGATGCTTGA-ACGTTTTC----TCTGCTTGAATGTTCTGGGTACATATCAGGTTATAAAACGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCATGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATACGATTTTTA-AAAATTATAGAT----AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235250 204 + 135778131 CTAGTAAATC-GATTCC-TTTTTGATGCTTGA-ATGTTTTC----TCTGCTTGAATGTTCTGGGTACGTATCGGGTTATAAAATGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCACGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATATGATTTTTT-AAAATTACAGAT----AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2664922 204 - 2847728 CTATTAAATC-AATTCC-TTTTTGATGCTTGA-ACGTTTTC----TCTGCTTGAATGTTCTGGGTACATATCAGGTTATAAAACGACTCGTCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTAGTAATCCATGTATTGAAATTTGACTCTTGATAG-TACATGCCAAG-CACATAGTTCCATAATACGATTTTTA-AAAATTATAGAT----AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795246 205 + 2368649 CTAGTAAATA-GATTCC-TTTTTGATGCTTGA-ATGTTTTC----TCTGCTTGAATATTCTGGGTACATATCAGATTATAAAACGACTCATCTTTAGTACACTTCAGTGCCTGAGGGTATTTTCTTGGTAATCCATGTATTGAAATTTGACTCTTGATAGTTACATGCCAAG-CACATAGTTCCATAATATGATTGTTA-AAAATTACAGAT----AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189563988 203 - 190850796 CTAATAAGTC-TATTCC-TTTTTGATGCTCGA-ATGTTTTC----TAGGCTTGAGTGTTCTGTGTACATGTGAGA-TATAAAATGATTCACCTTTAGGGCATTTCAGTACCTGAGCGTATTTTCTTGGTAATCTGACTATTGAGATTTGGCCCTTGATGG-TATATGCCAAG-CACATAGTTCCGTAATCTGATTTTTT-TAAATTGTAAAT----AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049063 204 - 14256875 CTAATAAATC-TATTCC-ATTTTGATGCTTGA-ATGTTTTC----TAGGCTTGAGTGTTCTGTGTACATGTTAGA-TATAAAATGATTCATCTTTGGAACATTTCAGTACCTGACAGTATTTTCTTGGTAATCTGACTATTGAAATTTGGTCCTTGATGG-TATATGCCAAG-CACATAGTTCCTTAATATGATTTTTTAAAAACTGCAAAT----AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938176 194 - 2196201 CTAATAAATC-TATTCC-TTTTTGATG-TTGA-ATGTTTTC----TAGGCTTGAGTGTTCTGTGTACATGTTAGA-TATAAAATGATTCATCTTTAGGACATTTCAG--------AGTATTTTCTTGGTAATCTGACTATTGAAATTTGGCTCTTGATGG-TATATGCCAAG-TACATAGTTCCGTAATATGATTTTTT-AAAATTGCAAAT----AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331074 203 - 5030052 CTAATAAATC-TATTCC-TTTTTGATGCTTGA-ATGTTTTC----TAGGCTTGAGTGTTCTGTGTACATGTTGGA-TATAAAATGATTCATCTTTAGTACATTTCAGTACCTGAGAGTATTTTCTTGGTAATCCGACTATTGAAATTTGGCCCTTGATGG-TATATGCCAAG-CACATAGTTCCGTAATATGATTTTTT-AAAATTGCAAAT----AA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466549 210 - 93316391 CTAATATATC-TATTCC-TTTTTGATACTTGA-ATGTGTTTTCCATATGTTTGAATTTGCTGTGTACACATTAGATTATAAAATTATTCATCTTTGGGACTATTCAGTGCCTTAGAATATTTTCTTGGTAATATGCCTATTGAAATTTGACTCTTAGTAA-TATATGTCAAG-TAAATATTTTCATAATATGATTTT---TAAATCCCAAATAATTAA i micMur3.chr14 I 1 C 0 s proCoq1.NW_012145301v1 3887629 211 + 3993831 CTAATATATC-TATTCCTTTTTTTATACTTGA-ATGTGTTTTCCATATGTTTGAATTTGCTGTGTACATCTTCGATTATAAAATGATTCATCTTTGGGACAATTCAGTGCCTTAGAATATTTTCTTGGTAATCTGCCTATTGAAATTTGACTCTTAGTAA-TATATGTCTAG-TAAATATTTTCACAATATGATTTT---TAAATCCCAAGTAATTAA i proCoq1.NW_012145301v1 I 29 C 0 s otoGar3.GL873580 11183130 209 - 11315646 TTAATACATC-CATTC--TATTTTATATGCAA-ATGTACTTTTCGTATGTTTGAATTTGCTGTGTACATATTAGATTATAAAATGATTAATCTTCAGGACAATTCAATGCCTTTGAATATTTTCTTGGTAATCTGCCTACTGAAACTTGACTCTTAGTAA-TATATATCAGG-TAAATATTTTCATAATATAATCTT---AAAATCCCAAGTTACTAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16873726 208 - 59632846 CTAATACATCTTTTTCC-TTTTTGATATCTGA-GTGTATTTTCCATATGTCTGAATTTACTGTGTACATATTAGATTATAAAGTGACTCATCCCTAGGACAACTCAGTGCCTTAGGATATTTTCTTGATAATCCGCCTATTGAAATTTGACTCTTAATAA-TATATATCAAG-AAACTACTTTC---ATATGATTTT---TAAATTCCAAATAATTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364731 186 - 2520184 ------------------TTTTTGATATTTGGTGTGCTTTC--CATATGATTGAATTTGCTGTGTA-------GATTCTGAAATGATTCATCCTTAAGTTACTTCTATGCCTTAGAATAGTATTTTGATATTCTGCCTATTGAAATTAGACTCTTAATAA-TAAATGTCAAGTTAAATACTTTC-TAGTATGACTTT---TAAATTATAGATACTTAA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86508807 1372 - 129401213 I a score=5846761.000000 s hg38.chr4_KI270789v1_alt 30955 403 + 205944 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAGATCAGTGTCAGATATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAATTATT-GTCTCTAACAATGCTCTCAAAGAGCTACCAGA-AAGGTTATTAAAATGAAACCTATGGT-CACTG--TAGTCAGAATACAAAACAAACACGCATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCATTTGTTTGATTTTACAAATAACT-----GATAGATGAGTGGAAATAATATTCAATGTCTTGCAATTTGCAGAAAAGAGAAGTGCGACTTTAATCTCAGAAGAAAATATTTCCC s panTro5.chr4 192823172 403 + 194502333 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAGATCAATGTCAGATATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAATTATT-GTCTCTAACAATGCTCTCAAAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CACTG--TAGTCAGAATACAAAACAAACACACATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCATTTGTTTGATTTTACAAATAACT-----GATAGATGAGTGGAAATAATATTCAATGTCTTGCAATTTGCAGAAAAGAGAAGCGCGACTTTAATCTCAGAAGAAAATATTTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192707769 403 + 195804263 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAGATTAATGTCAGATATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAATTATT-GTCTCTAACAATGCTCTCAAAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CACTG--TAGTCAGAATACAAAACAAACACACATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCATTTGTTTGATTTTACAAATAACT-----GATAGATGAGTGGAAATAATATTCAATGTCTTGCAATTTGCAGAAAAGAGAAGCGCGACTTTAATCTCAGAAGAAAATATTTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3743609 403 + 4876863 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAGATCAATGTCAGATATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAATTATT-GTCTCTAACAATGCTCTCAAAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CACTG--TAGTCAGAATACAAAACAAACACACATAGTCACCATATATTTGCATCCATTTGCACAGTGCATTTGTTTTATTTTACAAATAACT-----GATAGATGAGTGGAAATAATATTCAATGTCTTGCAATTTGCAGAAAAGAGAAGTGCGACTTTAATCTCAGAAGAAAATATTTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629286 403 + 115148730 TGTCAGATGAACACAACAGAAGACACTTA-GAAGTAAATCACATTTTGACCACTTTTAACAAATACTCTTAGATCAGTGTCAGATATGAGTCCTTAAAGTTTGGCCACAAAGATACTAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAACTATT-GTCTCTAACAATGCTCTCAAACAGCTACCAGG-AATGTTATTAAAATGAAAACTATGGT-CACTG--TAGTCAGAATACAAAACAAACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCATTTGTTTTATTTTACAAATAACT-----GATAGATTAGTGGAAATAATATTCAATCTCTTGCAATTTAAAGAAAAGAGAAGTGTGACTTTAATCTCAGAAGAAAGTATTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914275 403 + 190429646 TATCAGAT-GACACAATAGAAGACATTTG-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGTCAGGCATGAATCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATAAAATC---------TTTATCTTCATAATGTGTGCTTTTCTGAAGAACTTTT-GTCTCTAACAGTGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CAGTGTATAGTCAGGATACAAAACAAACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACTGA-TAGATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAGAAAATATTTCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187861723 403 + 189454096 TATCAGAT-GACACAATAGAAGACATTTG-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGTCAGGCATGAATCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TTTATCTTAATAATGTGTGCTTTTCTGAAGAACTTTT-GTCTCTAACAGTGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CAGTGTATAGTCAGGATACAAAACAAACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACTGA-TAGATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAGAAAATATTTCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243053 403 - 25927173 TATCAGAT-GACACAATAGACGACATTTG-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGTCAGGCATGAATCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TTTATCTTCATAATGTGTGCTTTTCTGAAGAACTTTT-GTCTCTAACAGTGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CAGTGTATAGTCAGGATACAAAACAAACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACTGA-TAGATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAAAAAATATTTCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278068 396 + 4669795 TATCAGAT-GACACAATAGAAGACATTTG-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTT-----AATGTCAGGCATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TTTATCTTCATAATGTGTGCTTTTCTGAAGAACTTTT-GTCTCTAACAGTGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CAGTG--TAGTCAGGATACAAAACAAACAAAATTAGTCACAGTTCATTTGCATCCATTTGCACAGGGCTTTTGTTTTACTTTACAAATAACTGA-TAGATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAGAAAATATTTCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235454 398 + 135778131 TATCAGATCAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGATCACTTTTAACAAATACTCTTAAATCAATGCCAGGCATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTATCTTCATAATGTGTGCTCTTCTGAAGAACTTTT-GTCTCTAACAATGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTATGGT-CAGTG--TAGTCAGAATACAAAACAAACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACT-----GATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCACAACTTTAATCTCAGAAGAAAATATTTCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665126 396 - 2847728 TATCAGAT-GACACAATAGAAGACATTTG-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTT-----AATGTCAGGCATGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TTTATCTTCATAATGTGTGCTTTTCTGAAGAACTTTT-GTCTCTAACAGTGCTCTCAGAGAGCTACCAGA-AAGGTTATTAAAATGAAAACTGTGGT-CAGTG--TAGTCAGGATACAAAACAAACAAAATTAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACTGA-TAGATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAGAAAATATTTCCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795451 397 + 2368649 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAATCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGTCAGGCCTGAGTCCTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTGTCTTCATAATGTGTGCTCTTCTGAAGAACTTTT-GTCTCTAACAATGCTCTCAGGGAGCGACCAGA-AAGATTATTAAAATG-AAACTATGGT-CAATG--TAGTCAGAATACAAAACACACACAAATAGTCACAGTTCATTTGCATCCATTTGCACAGTGCTTTTGTTTTACTTTACAAATAACT-----GATAGATTAGTGGAAATAATATTCAATCTCTTACGATTTG-----AAGAAAAGCGCAACTTTAATCTCAGAAGAAAATATTTCCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564191 376 - 190850796 TATCAGATGAACATAACAGAAGACACTTA-GAAATAAAGCACATTCTGACCA---------------CTTAAACCAATGCCAGACCTGAGTCTTTAAAGTTTGGCCACAAAGATAACAAACACCTTATCAAATC---------TCTGTCTTCATACAGCGGGCTCTTCTGAGGAATTCTTGGTCTCTGACGACGCTCTCCGAGAGCTACCGGG-AAGCTTATTACAATGAAAACTCCAGC-CAGTG--TGGTCAGAAC-----------GC--AGAGTCCCCATTCACCTGCGCCCGTCTGCACAGTGCACTTCCTTAACTTGACAAATAACTGA---TGCAAGTTAGTGGAAATCATGTTCAATCTC--GCGATCTGAAGAAAAGAGAAGTGCAGCTTTAATCTCAGAAGAAAATGGTTCCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049267 404 - 14256875 TATCAGATGAATACAACAGATGACACTTA-GAAATAAAGCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGCCCGACGTGAGTCTTTGAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTGTCTTCATACTGTGAGCTCTTCTGAAGAATTGTTGGTCTCTGACAACGCTCTCCAAGAGCTACCAGA-AAGCTTATTAACATGAAAACTCCAGT-CAATG--TGGTCAGAACACAAAGCGAATAC--AGAGTCCCAGTTTACCTGCACCCGTTTGCACAGTGCCCCGGTCTTACTTTACAAATAACTGA---CATAGATTAGTGGAAATAATATCCAATCTCTTATGATTTGAAGAAAAGAGAAGTGCAACTTTAATCTCAGAAGAAAAGACTTCCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938370 404 - 2196201 TATCAGATGAACACAACAGGAGACACTTA-GAAATAAAGCACATTTTGACCACTTTTAACAAATACTCTTAAATCTATGCCAGACATGAGTCTTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTGTCTTCATACCGTGAGCTCTTCTGAAGAATTGTTGGTCTCTGACAACGCTCTCCAAGAGCTACCAGC-AAGCTTATTAAAATGAAAACTACAGT-CAACG--TGGTCAGAACACAAAGCAAATAT--AGAGTGCCAGTTCATCTGTACCCATTTGCACAGTGCACTTGTTTCGCTTCACAAATAACTGA---TATAGATTAGTGGAAATAATATTCAATCTCTTATGATTTGAAGAAAAGAGAAGGGCAACTTTAATCTCAGAAGAAAATATTTCCC i cebCap1.NW_016107886v1 C 0 I 43 s aotNan1.NW_018492112v1 3331277 405 - 5030052 TATCAGATGAACACAACAGAAGACACTTA-GAAATAAAGCACATTTTGACCACTTTTAACAAATACTCTTAAATCAATGCCAGATATGAGTCTTTAAAGTTTGGCCACAAAGATAATAAACACTTTATCAAATC---------TCTTTCTTCATACTGTGAGCTCTTCTGAAGAATTGTTGGTCTCTGACAACATTCTCCAAGAGCTACCAGA-AAGCTTATTA-AATGAAAACCACAGT-CAATG--TGATCAGAACACAAAGCAAATACGAAGAGTCCCAGTTCCTCTGCACCCATTTGCACAGTGTGCTTGTTTTACTTTACGAATAACTGA---TATAGATTAGGAGAAATAATATCCAATCTCTTATGATTTGGAGAAAAGAGAAGTGCAACTTTAATCTCAGAAGAAAATATTTCCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17466759 403 - 93316391 TAGTAGATGGATATAACAGAAGACACTAA-GAAAGAAATCACATTTTGACCACTTTTAAGAAATACTCTTAAATCAACTTCAGACATGAGTCCTTAAAGCTTGGCCACCAAGATAATAAACACTTGATCAAATC---------GCTATCTTCATGATAT-TACTCTTCT---GAATTATTGGTCTCTAACAACACTCACAAAGAGCTATCAGA-CAGGCTATTAAAATGCAAACTACGGT-AGATG--TACTCAGAATATAAAACAAACACAAATAGTCACAGTCCATTTGCATCCATTTGCACAATGCATTTATTCTATTTTATAAATAACTGA-TAGAGAGACTAGTGGAAA-AATATTCAACCTCTTACGATTTGAAGAAAAGGGAAGTGCAACTTCAAACGCAGAGGAAAATATTTCCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3887840 407 + 3993831 TAGTAGATGGATAGAACAGAAGACACTTA-GAAAGAAATCACATTTTGATCACTTTTAAGAAATACTCTTAAATCAACTTCAGACATGAGTCATTAAAGCTTGGCCACCAAGATAATAAGCACTTGATCAAATC---------GCTATCTTCATGATATGCACTCTTCTAAAGAATTGTTGGTCTCTAACAACACTCACAAAGAGCTATCAGA-CAGGCTATTAAAATGCAAACTATGGT-AGATG--TACTCAGAATATAAAACAAACACAAATAGTCACAGTCCATTTGCATCCATTTGCACAATGCATTTATTCTATTTTATAAATAACTGA-TAGATAGACTAGTGGAAA-AATATTCAACCTCTTATGATTTGAAGAAAAGGGAAGTGCAACTTCAATGTCAGAGGAAAATATTTTTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11183339 415 - 11315646 CATTAGATGAATACAACC-AAGACCCTTA-GAAATAAATCACATTTTGACCCCTTTGAAGAAATCTTTTTAAATCAACTCCAGACACGACTCCTTAAAGCCTGGCCACCAAGATAATAAACACCTGATCAAATCTCTGTCTTTGCTATCTTCATGATACATACACTTCTAACAAATTATTGGTCTCTAGCAACACTCTCAAAGAGCTATCAGA-CAGGCTATTAAAATGCAAACTATGGT-GAATG--TACTCAGAATATAAAACAAACACAAATAGTCACAGTCCATTTGCATCCATTTGCACAATGCatttattttattttataaataaCTGA-TAGGTAGATTAGTGGAAA-AATACCCAACCTCTTATGATTTAAAGAAAACGAAAGTACAACTTCAATCTTAGAGGAAAATATTTCCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86510179 402 - 129401213 TATTAAGTGAGAACATAAGAAAACCCTTATAAAATTAATCACATTTTGTCCAGTTTTAGGAAATGATCTTATATCTATGATAGGTTTGAATCCTCA-------GGCATCACAAAAATAAACACTTTATCAAGTC---------TCTCTCTCTATAATGTGCACTCTTGTAAGAAATTATTAGTCTCTAAGAGCTCTCTCAAAGACCTACCAGG-CAGGCTATTAAAATGCACACTTTGCTAAAATG--TACTGAGAATATAAAACAAACATAAATAGTCACAGTTCATTTACATCCATTTGTACAATGAATTCATTTTA--TTGCAAATAACTAAATAGACATATTAGAGGAAAGAATACCTCACCTGTCATATTTTGAAGGAAAAGAAAGCTCAGCTTTAAACTCAAAGAGAATTATTTCTT i mm10.chr8 I 1372 C 0 s canFam3.chr16 16873934 398 - 59632846 TATTAGATGAATACAACAGAAGGCATTAG-------AATCACATTTTGACCAATTTTAAGAAATAGTCTTAAATCAACTTTAGACATGAGTCCTTATAGCTTAGCCACCAAAATAATAAGCACTTTATCAAATC---------TCTATTTTCATTGTAGGCACTCTTCT-AAGAATTATTAGTCTCTAACAACATTCTCAAAGAGCTACTAGGCAAGGCTATTAAAATGCAAACTATGGC-AAATG--TACTCAGAATATAAAACAAACACCAATTGTCACAGTTCATTTACATCCATTTGCACAATGCATTTATTTTATTTTACAAATAACTGA-TAGATAGGTTAGTGGAAATAATATCCAACCTCTCATA---TGAAGAATAG-GAAGTGTAATTTCAATCTCAGAAGAAAATATTTTCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1364917 398 - 2520184 TATGAGAGGAGTGCGAAAGTAGGAATTTA-GAAATAAAAAATGTTTTGGCCACTTTTAAGAAATACTCCTAAATTGACTTTAGGTATTAATCCTTATAGCTTAACCTCCAAGATAATGAGCAACTTACCAAAGC---------TTTAGTTTACTAACATATGTCAGTCTAAGGA----TT-GTCTATAA-AACATTCCCAAAGAGCTATCAGA-CAGACTATTAAAAGGCAAGCT--GGT-AAACA--TACTCAGAACATAAAACAATGACAAATTGTCACACT--GGTTACAACCAGGGACACAATGCATTTATTTTATTTTACAAATAATTGT-TCTATAGATTAGTGGATATAGTATTCAACTTGTCATGATTTAAGGAGAAGGGAAGTTTAACTTCAATCTCACAGAAAATTATTTCCT i dasNov3.JH570353 C 0 C 0 a score=164500.000000 s hg38.chr4_KI270789v1_alt 31358 14 + 205944 AGAGAATGTGAATA s panTro5.chr4 192823575 14 + 194502333 AGAGAATGTGAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708172 14 + 195804263 AGAGAATGTGAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744012 14 + 4876863 AGAGAATGTGAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629689 14 + 115148730 AGAGAATGTGAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914678 14 + 190429646 AGAGAATGTGAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862126 14 + 189454096 AGAGAATGTGAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243456 14 - 25927173 AGAGAATGTGAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278464 14 + 4669795 AGAGAATGTGAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235852 14 + 135778131 AGAGAATGTGAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665522 14 - 2847728 AGAGAATGTGAGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795848 14 + 2368649 AGAGAATGTGAATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564567 14 - 190850796 AGAGCATGTGAACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049671 14 - 14256875 AGAGCATGGGAACA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3331682 14 - 5030052 AGAGCATGTGAATA i aotNan1.NW_018492112v1 C 0 I 20 s micMur3.chr14 17467162 14 - 93316391 AGTGAGTGTTAATA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3888247 14 + 3993831 AGTGAGTGTTAATA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11183754 14 - 11315646 AGAGAGTGTTTGTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86510581 14 - 129401213 GAAGTATCTTAATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16874332 12 - 59632846 --AGAGCGTTTATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365315 9 - 2520184 GGAGAATTT----- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 938774 43 - 2196201 I a score=245774.000000 s hg38.chr4_KI270789v1_alt 31372 30 + 205944 TCTAGTATATTGTGCTATCA-------------AAA-CTCTATC s panTro5.chr4 192823589 30 + 194502333 TCTAGTATGTTGTGCTATCA-------------AAA-CTCTATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708186 30 + 195804263 TCTAGTATGTTGTGCTATCA-------------AAA-CTCTATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744026 30 + 4876863 TCTAGTATGTTGTGCTATCA-------------AAA-CTCTATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629703 31 + 115148730 TCTAGCATGTTGTGCTATCA-------------AAAGCTCTGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914692 31 + 190429646 TCTAATATGTTGTGCTATCA-------------AAAGTCCTATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862140 31 + 189454096 TCTAATATGTTGTGCTATCA-------------AAAGTCCTATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243470 31 - 25927173 TCTAATATGTTGTGCTATCA-------------AAAGTTCTATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278478 31 + 4669795 TCTAATATGTTGTGCTATCA-------------AAAGTCCTATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235866 31 + 135778131 TCTAATATGTTGTGCTATCA-------------AAAGTCCTATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665536 31 - 2847728 TCTAATATGTTGTGCTATCA-------------AAAGTCCTATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795862 31 + 2368649 TCTAATATGTTGTGTTATCA-------------AAAGTCCTATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564581 30 - 190850796 CCTAGCAGTTTGTGTCACCC-------------AAAGCCCTAT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049685 30 - 14256875 CCTACGCGTTTGTGTGACTC-------------ACAGCCCTAT- i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17467176 31 - 93316391 TCTAATATCTTGTGTTACCA-------------AAAGACAGATA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3888261 31 + 3993831 TCTAATATCTTGTGCTACCT-------------AAAGACATATA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11183768 30 - 11315646 TCTAATACCTTGTGCTACC--------------AAAGGCATATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86510595 43 - 129401213 TTTAATAC-TTATGatgccatagggtcagccctgaaatcatata i mm10.chr8 C 0 I 23 s canFam3.chr16 16874344 31 - 59632846 TCTAATGTTTTGTGCTGTCA-------------AAAGACCTATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365324 22 - 2520184 ---------CTGTGCTCTCA-------------ACAGACCCATA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 938774 43 - 2196201 I e aotNan1.NW_018492112v1 3331696 20 - 5030052 I a score=205336.000000 s hg38.chr4_KI270789v1_alt 31402 15 + 205944 CCTTTATTTTATGTC s panTro5.chr4 192823619 15 + 194502333 CCTTTATTTTATGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708216 15 + 195804263 CCTTTATTTTATGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744056 15 + 4876863 CCTTTATTTTATGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629734 15 + 115148730 CCTTTATCTTATGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914723 15 + 190429646 CCTTTATTTTATGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862171 15 + 189454096 CCTTTATTTTATGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243501 15 - 25927173 CCTTTATTTTATGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278509 15 + 4669795 CCTTTATTTTATGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235897 10 + 135778131 C-----TTTTATGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665567 15 - 2847728 CCTTTATTTTATGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795893 15 + 2368649 TGTTTATTTTACGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564611 15 - 190850796 CCTTTATTTTATGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049715 15 - 14256875 CCTTTATTTTATGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938817 15 - 2196201 TCTTTATTTCATGTC i cebCap1.NW_016107886v1 I 43 C 0 s aotNan1.NW_018492112v1 3331716 15 - 5030052 CCTTTATTTTATGTC i aotNan1.NW_018492112v1 I 20 C 0 s micMur3.chr14 17467207 15 - 93316391 ATTTTATTTTGCATC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3888292 15 + 3993831 ATTTTATTTTACATC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11183798 15 - 11315646 ATTTTATTTTATATC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86510661 15 - 129401213 tgattaatttatatt i mm10.chr8 I 23 I 225 s canFam3.chr16 16874375 15 - 59632846 ATTTTATTTTGCATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365346 15 - 2520184 ATACTATTTTGCATT i dasNov3.JH570353 C 0 C 0 a score=60964.000000 s hg38.chr4_KI270789v1_alt 31417 4 + 205944 CTTG s panTro5.chr4 192823634 4 + 194502333 CTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708231 4 + 195804263 CTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744071 4 + 4876863 CTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629749 4 + 115148730 CTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914738 4 + 190429646 CTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862186 4 + 189454096 CTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243516 4 - 25927173 CTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278524 4 + 4669795 CTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235907 4 + 135778131 CTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665582 4 - 2847728 CTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795908 4 + 2368649 CTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564626 4 - 190850796 CTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049730 4 - 14256875 TTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938832 4 - 2196201 CTGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331731 4 - 5030052 CTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17467222 4 - 93316391 CTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3888307 4 + 3993831 CTTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11183813 4 - 11315646 TTCA i otoGar3.GL873580 C 0 I 613 s mm10.chr8 86510901 4 - 129401213 CTTA i mm10.chr8 I 225 C 0 s canFam3.chr16 16874390 4 - 59632846 CTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365361 4 - 2520184 CCTA i dasNov3.JH570353 C 0 C 0 a score=1022302.000000 s hg38.chr4_KI270789v1_alt 31421 63 + 205944 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTACTTGATTGGAAAAGTGCCTGCATATTTGGA s panTro5.chr4 192823638 63 + 194502333 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708235 63 + 195804263 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744075 63 + 4876863 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629753 63 + 115148730 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914742 63 + 190429646 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862190 63 + 189454096 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243520 63 - 25927173 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278528 63 + 4669795 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235911 63 + 135778131 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665586 63 - 2847728 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTGGAAAAGTGCCTGCATATTTGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795912 63 + 2368649 CTTGACATTTAGTTGG-GGTTTATTCAAGGA-TTATTTGATTTGAAAAGTGCCTGCATATTTGGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564630 63 - 190850796 CTTGACATTTAGCTGG-GGTTTATTCAAGGA-GGATTTGATTGGAAAAGTGCCTGCCTATTGGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049734 63 - 14256875 CTTGACGTTTAGCTGG-GGTTTATTCAAGGA-TGATTTGACTGGAAAAGTGCCTGCCTATTGGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938836 62 - 2196201 CTTGACATTTAGTTGG-GG-TTATTCAAGGA-TGATTTGATAGGAAGAGTGCCTTCCTATTGGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331735 63 - 5030052 CTTGACGTTTAGTTGG-GGGTTATTCAAGGA-TGATTTGATTGGAAAAGTGCCTGTCTATTGGGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17467226 63 - 93316391 CTTGACATTTATTTGG-GGTTTATTCAAGGA-TTCTTGGATTGGAAAAATGCCTGCATATTTGGA i micMur3.chr14 C 0 I 3792 s proCoq1.NW_012145301v1 3888311 63 + 3993831 TTTGACATTTATTTGG-GGTTTATTCAAGGA-TTCTTGTATTGGAAAAGTGCCTGCATATTTGGA i proCoq1.NW_012145301v1 C 0 I 3254 s otoGar3.GL873580 11184430 63 - 11315646 CTTGACATTTATTTGA-AATTTATTCCAGAA-TTCTTTGATCAGAACAGTGCCTGCATATTTGGA i otoGar3.GL873580 I 613 C 0 s mm10.chr8 86510905 64 - 129401213 CTTGATATTTACTTGA-GATATATTCAAGGATTTTTTTGATTTAAGGAGTGCTTATATATTTGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16874394 58 - 59632846 TCTGACATTTATCTGG-GGCTTATTCAAAGA-TCCTTTGA----AAAACTG-TTATATATTTGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365365 63 - 2520184 TTTGACATTTTTTGGGTGGTCTATTCATGGATTTTTTTGAT--AAAAAGTGCTTTCCAAGCTGGA i dasNov3.JH570353 C 0 C 0 a score=777170.000000 s hg38.chr4_KI270789v1_alt 31484 67 + 205944 TGTTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACATT----------TTCTGTTTTAGAAACAG s panTro5.chr4 192823701 67 + 194502333 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACATT----------TTCTGTTTTAGAAACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708298 67 + 195804263 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACATT----------TTCTGTTTTAGAAACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744138 67 + 4876863 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACATT----------TTCTGTTTTAGAAACAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629816 67 + 115148730 TATTTA-AATACATTTGGTTTCTGTCTCAAGTGACATTTGTGGAAAACACT----------TTCTGTTTTAGAAACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914805 67 + 190429646 TATTTA-AATACAGTTGATTTATGTCTCAAGTGACATTTGTGGAAAACACT----------TCctgttttagaaagag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862253 67 + 189454096 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACACT----------TCctgttttagaaagag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243583 67 - 25927173 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACACT----------TCctgttttagaaagag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278591 67 + 4669795 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGAAAACACT----------TCctgttttagaaagag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134235974 67 + 135778131 TATTTA-AATACAATTGATGTATGTCTCAAGGGACATTTGTGGAAAACACT----------TCCTGTTTTAGAAACAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665649 67 - 2847728 TATTTA-AATACATTTGATTTATGTTTCAAGTGACATTTGTGGAAAACACT----------TCctgttttagaaagag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 795975 77 + 2368649 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTGTGGACAATGTTTTAGAAACAGTCCTGTTTTAGGAACAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564693 67 - 190850796 TATTTA-AATACATTTGATTTATGTCTCTTATGTTATTTCTCGAAAACGCT----------TTTTGTTTTAGAAACAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049797 67 - 14256875 TATTTA-AATACATTTGGTTTATGTCTCAAGTGATATTTCTGGAAAATGCT----------TTCTGTTTTAGAAACAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 938898 67 - 2196201 TATTTA-AATACATTTGATTTATGTCTCAAGTGATATTTCTGGAAAACGCT----------TTCTGTTTTAGAAACAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331798 67 - 5030052 TATTTA-AATACATTTGATTTATGTCTCAAGTGACATTTCTGGAAAACGCT----------TCCTGTTTTAGAAACAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11184493 67 - 11315646 CCTTTA-CATACATTTTATTTACATCAGAAGCAAGATTTATAGATAATACA----------TCTTGCTTTATACAGAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86510969 65 - 129401213 --TCTACAAAACATTTGATTTCT-TTTGAAGTAGTATCTTTGAAAAGCTTG----------TCCAGTTTTTATGTAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16874452 64 - 59632846 TCTTTA-CACATATTTAACTTATatatgaagtggtatttgtggaaaatact----------tcctgttttggata--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1365428 52 - 2520184 CATTTA-AATACATTTAATTTATATTTGCGGTGATG-------------------------TTCTGCTTTAGACAGAG i dasNov3.JH570353 C 0 I 2996 e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I a score=393638.000000 s hg38.chr4_KI270789v1_alt 31551 59 + 205944 TCAGGGTCAGG-GAGGTC-TC--GCCGAGGGGAGGCAgggac------tcaaatgaag-----gactggccaca s panTro5.chr4 192823768 45 + 194502333 TCAGGGTCAGG-GAGGTC-TC--GCCGAGGGGAGGCAGGGAC------TCAAATG------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708365 45 + 195804263 TCAGggtcagg-gaggtc-tc--gccgaggggaggcagggac------tcaaatg------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744205 48 + 4876863 TCGGggtcagg-gaggtc-tc--gccgaggggaggcagggac------tcaaatgaag---------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629883 59 + 115148730 TCGGggtcagg-gaggtc-tc--cccgaggggaggcagggac------tccgaggaag-----gactggccaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914872 48 + 190429646 tcggcatcagg-gaggtc-tc--cacgggggaaggcagggac------gcaaatgaag---------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862320 48 + 189454096 tcggcatcagg-gaggtc-tc--cacgggggaaggcagggac------gcaaatgaag---------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243650 48 - 25927173 tcggcatcagg-gaggtc-tc--cacgggggaaggcagggac------gcaaatgaag---------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278658 48 + 4669795 tcggcatcagg-gaggtc-tc--cacgggggaaggcagggac------tcaaatgaag---------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236041 48 + 135778131 TTGGCGTCAGG-GAGATC-TC--CCCGGGGGGAGGCAGGGAC------TCAAATGAAG---------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665716 48 - 2847728 tcggcatcagg-gaggtc-tc--cacgggggaaggcagggac------tcaaatgaag---------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796052 48 + 2368649 TCGGTGTCAGG-GAGGTC-TC--CCCAGGGGGAGGCAGGGAC------TCAAATGGAG---------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564760 59 - 190850796 TCGGGGTCAGG-GAGGTC-TC--CCTGAGGGGAGGCAGGGAC------TCAAATGAAG-----GGCTGGTCACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13049864 58 - 14256875 TCGGGGTC-GG-GGGGCC-TC--CCTGAGGGGAGGCAGGGAC------TCAGATGAAG-----GACTGGTCAca i saiBol1.JH378165 C 0 I 1267 s cebCap1.NW_016107886v1 938965 59 - 2196201 TCGGGGTCAGG-GAGGCC-CC--CCTGAGGGGAGGCAGGAAC------TCAGATGAAG-----GACTGGTCACA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331865 59 - 5030052 TCGGGGTGAGG-GAGGTC-TC--CCTGAGGGGAGGCAGGGAC------TCAAATGAAG-----GACTGGTCACA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11184560 57 - 11315646 TTGGGATCAGA-AAGGTCTTC--CCTGAGGCAAAGCAGA---------TTAAGCCAAG-----GACTGTCCTTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86511034 50 - 129401213 ACTGTGCCTGG-GGATAC-TCATTCCTAACAAAAGTACAGAC------TCAGCTGAAG---------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16874516 67 - 59632846 ----ggtcaggcaaagta-tt--ccttagaagacatggggacatgaattcagataaagtcaagggttatccatg i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I a score=4174.000000 s hg38.chr4_KI270789v1_alt 31610 4 + 205944 tgga s nomLeu3.chr7b 112629942 4 + 115148730 cgga i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189564819 4 - 190850796 CGGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 939024 4 - 2196201 TGGA i cebCap1.NW_016107886v1 C 0 I 65 s aotNan1.NW_018492112v1 3331924 4 - 5030052 TGGA i aotNan1.NW_018492112v1 C 0 I 31 s otoGar3.GL873580 11184617 4 - 11315646 TAGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16874583 4 - 59632846 tggc i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511084 0 - 129401213 C e saiBol1.JH378165 13049922 1267 - 14256875 I e colAng1.NW_012116221v1 796100 0 + 2368649 C e manLeu1.NW_012102221v1 2665764 0 - 2847728 C e chlSab2.chr7 134236089 0 + 135778131 C e cerAty1.NW_012001672v1 3278706 0 + 4669795 C e macNem1.NW_012013133v1 24243698 0 - 25927173 C e macFas5.chr5 187862368 0 + 189454096 C e rheMac8.chr5 188914920 0 + 190429646 C e gorGor5.CYUI01015356v1 3744253 0 + 4876863 C e panPan2.chr4 192708410 0 + 195804263 C e panTro5.chr4 192823813 0 + 194502333 C a score=-11953.000000 s hg38.chr4_KI270789v1_alt 31614 30 + 205944 gtatgtgtatctcggagaagaa-cattgctg s nomLeu3.chr7b 112629946 5 + 115148730 gcatg-------------------------- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189564823 23 - 190850796 -------CGCCTCAGAGAAGAA-CACGGCTG i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11184621 17 - 11315646 -------------TGTTGGGGA-CCTGGATG i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86511084 5 - 129401213 -----------------------TATAG--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16874587 21 - 59632846 -------cattccggagaagaattcttg--- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 939028 65 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3331928 31 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e colAng1.NW_012116221v1 796100 0 + 2368649 C e manLeu1.NW_012102221v1 2665764 0 - 2847728 C e chlSab2.chr7 134236089 0 + 135778131 C e cerAty1.NW_012001672v1 3278706 0 + 4669795 C e macNem1.NW_012013133v1 24243698 0 - 25927173 C e macFas5.chr5 187862368 0 + 189454096 C e rheMac8.chr5 188914920 0 + 190429646 C e gorGor5.CYUI01015356v1 3744253 0 + 4876863 C e panPan2.chr4 192708410 0 + 195804263 C e panTro5.chr4 192823813 0 + 194502333 C a score=-1986.000000 s hg38.chr4_KI270789v1_alt 31644 22 + 205944 acctctgtaggaagaaagactg----------- s panTro5.chr4 192823813 5 + 194502333 -----------------GACTG----------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708410 5 + 195804263 -----------------gactg----------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744253 5 + 4876863 -----------------gactg----------- i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188914920 5 + 190429646 -----------------gactg----------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862368 5 + 189454096 -----------------gactg----------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243698 5 - 25927173 -----------------gactg----------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278706 5 + 4669795 -----------------gactg----------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236089 5 + 135778131 -----------------GACTG----------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665764 5 - 2847728 -----------------gactg----------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796100 5 + 2368649 -----------------GACTG----------- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11184641 17 - 11315646 -----AGCAGGATGAGATGCTG----------- i otoGar3.GL873580 I 3 I 210 s mm10.chr8 86511089 5 - 129401213 -----------------TCCTT----------- i mm10.chr8 C 0 I 1 s canFam3.chr16 16874608 17 - 59632846 ----------------atgttggcaagaaaaag i canFam3.chr16 C 0 C 0 e calJac3.chr3 189564846 0 - 190850796 C e cebCap1.NW_016107886v1 939028 65 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3331928 31 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e nomLeu3.chr7b 112629951 0 + 115148730 C a score=246804.000000 s hg38.chr4_KI270789v1_alt 31666 55 + 205944 gccacatggagcatgtgtatcttgg-agaagaacattgctgacctctgtaggaaga s panTro5.chr4 192823818 55 + 194502333 GCCACATGGAGCATGTGTATCTCGG-AGAAGAACATTGCTGACCTCTGTAGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708415 55 + 195804263 gccacatggagcatgtgtatctcgg-agaagaacattgctgacctctgtaggaaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744258 55 + 4876863 gccacatggagcgtgtgtatctcgg-agaagaacattgctgacctctgtaggaaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629951 37 + 115148730 ---------------tgtatctcgg----agaacattgctgacctctgtaggaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914925 55 + 190429646 gccacatggagtatgtgtatctcag-agaagaatgtggctgatctctgtaggaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862373 55 + 189454096 gccacatggagtatgtgtatctcag-agaagaatgtggctgatctctgtaggaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243703 55 - 25927173 gccacatggagtgtgtgtatctcag-agaagaatgtggctgatctctgtaggaaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278711 55 + 4669795 gccacatggagtatgtgtatctcag-agaagaatgtggctgatctctgtaggagga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236094 54 + 135778131 GCCACAT-GAGTATGTGTATCTCAG-AGAAGAACATGGCTGACCTCTGCAGGAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665769 55 - 2847728 gccacatggagtatgtgtatctcgg-agaagaatgtggctgatctctgtaggagga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796105 55 + 2368649 GCCGCATGGAGTATGTGTGTCTCAG-AGAAGAACATGGCTGACCTCTGTAGGAAGA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86511095 46 - 129401213 ----------GCATGCAGATATTGGTGGGAGAACTTTCTTAAATTCTAACTGCAGA i mm10.chr8 I 1 C 0 s canFam3.chr16 16874625 7 - 59632846 ------------aggtata------------------------------------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189564846 0 - 190850796 C e cebCap1.NW_016107886v1 939028 65 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3331928 31 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=228999.000000 s hg38.chr4_KI270789v1_alt 31721 35 + 205944 aagatgtgcacag--------gtgggtctggtctatgccacat s panTro5.chr4 192823873 35 + 194502333 AAGATGTGCACAG--------GTGGGTCTGGTCTATGCCACAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708470 35 + 195804263 aagatgtgcacag--------gtgggtctggtctatgccacac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744313 35 + 4876863 aagatgtgcacag--------gtgggtctggtctatgccacat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112629988 35 + 115148730 aagatgtgcacag--------gtgggtctggtctatgccacgc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188914980 35 + 190429646 aagatgtgcacag--------gtgggtctggtctatgccatgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862428 35 + 189454096 aagatgtgcacag--------gtgggtctggtctatgccatgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243758 35 - 25927173 aagatgtgcacag--------gtgggtctggtctatgccatgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278766 35 + 4669795 aagatgtgcacag--------gtgggtctggtctatgccatgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236148 35 + 135778131 AGGATGTGCACAG--------GTGGGTCTGGTCTATGCCATGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665824 35 - 2847728 aagatgtgcacag--------gtgggtctggtctatgccatgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796160 35 + 2368649 AGGATGTGCACAG--------GTGGGTCTGGTCTATGCCACGG i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3331959 34 - 5030052 AAGATGTGCACAG--------G-GCGTCTGGGCTGTGCTACTG i aotNan1.NW_018492112v1 I 31 C 0 s mm10.chr8 86511141 43 - 129401213 GAGCCATGCAAAGATTGAGATGTGAATTCAATCTATGCTACAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16874632 30 - 59632846 aaaagattctgaa--------gtgggcctgtctcaggt----- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189564846 0 - 190850796 C e cebCap1.NW_016107886v1 939028 65 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=33586.000000 s hg38.chr4_KI270789v1_alt 31756 4 + 205944 ggat s panTro5.chr4 192823908 4 + 194502333 GGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708505 4 + 195804263 ggat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744348 4 + 4876863 ggat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630023 4 + 115148730 agat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915015 4 + 190429646 gaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862463 4 + 189454096 gaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243793 4 - 25927173 gaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278801 4 + 4669795 gaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236183 4 + 135778131 GAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665859 4 - 2847728 gaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796195 4 + 2368649 GAAT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 939093 4 - 2196201 GGAT i cebCap1.NW_016107886v1 I 65 C 0 s aotNan1.NW_018492112v1 3331993 4 - 5030052 GGAT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86511184 4 - 129401213 AAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16874662 4 - 59632846 gaat i canFam3.chr16 C 0 C 0 e calJac3.chr3 189564846 0 - 190850796 C e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=1134055.000000 s hg38.chr4_KI270789v1_alt 31760 140 + 205944 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagacatttggagaggc-------tgccatattttaaagg--------------------------------ttttgtggccaTGTTTA----GATTTGGTTATAAGAGT----------CATAGGACACCATTG---------------------GTCTTCTGTTT s panTro5.chr4 192823912 140 + 194502333 CCCAGTAACAGCAAGCAGGCCA-ATGTAACAGGGGTAG--AG-AAGCAAAGGAGACATTTGGAGAGGC-------TGCCATATTTTAAAGG--------------------------------TTTTGTGGCCATGTTTA----GATTTGGTTATAAGAGT----------CATAGGACACCATTG---------------------GTCTTCTGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708509 140 + 195804263 cccagtaacagcaagcaggcca-atgtaacaggggtag--ag-aagcaaaggagaCATTTGGAGAGGC-------TGCCATATTTTAAAGG--------------------------------TTTTGTGGCCATGTTTA----GATTTGGTTATAAGAGT----------CATAGGACACCATTG---------------------GTCTTCTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744352 140 + 4876863 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagacatttggagaggc-------tgccatattttaaagg--------------------------------ttttgtggccaTGTTTA----GATTTGGTTATAAGAGT----------CATAGGACACCATTG---------------------GTCTTCTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630027 140 + 115148730 cccagtaacagcaaggagccca-atgtaacaggggtag--ag-aagcaaaggagaCATTTGGAGAGGT-------TGCCGTATTTTAAAGG--------------------------------TTTTGTGGCCATGTTTA----GATTTGGTTGTAAGAGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915019 138 + 190429646 cccagtaacagcaaggaggcca-atgtaac--gggtag--ag-aagcaaaggagacatttggagaagt-------tgCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTATAAGGGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862467 140 + 189454096 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagacatttggagaagt-------tgCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTATAAGGGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243797 140 - 25927173 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagacatttggagaagt-------tgCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTATAAGGGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278805 140 + 4669795 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagacatttggagaagt-------tgCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTATAAGGGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236187 138 + 135778131 CCCAGTAACAGCAAAGAGGCCA-ATGTAAC--GGGTAG--AG-AAGCAAAGGAGACATTTGGAGAGGT-------TGCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGCTATAAGGGT----------CATAGGACACCACTG---------------------GTCTCCTGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2665863 139 - 2847728 cccagtaacagcaaggaggcca-atgtaacaggggtag--ag-aagcaaaggagaca-ttggagaagt-------tgCCATATATTAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTGTAAGGGT----------CATAGGACACCACTG---------------------GTCTTCTGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796199 138 + 2368649 CCCAGTAACAGCAAGGAGGCCA-ATGTAAC--GGGTAG--AG-AAGCAAAGGAGACATTTGGAGAGGT-------TGCCGTATATGAAAGC--------------------------------TTTTGTGGCCATGTTTA----GACTTGGTTATAAGGGT----------CGTAGGACACCACTG---------------------GTCTTCTGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189564846 177 - 190850796 CCCGGCAACAGCAAGGAGGCCA-GTGCAGGAGGGAGAG--AGAAAGCAAAGCACACATTTGGAGAGGT-------CACCATATTTTAAAAGACTTGTGGCCATGTTTATTTAGATTTGGTCATACTTGTGGCCATGTTTATTTGGATTTGGTCATAAGAGT----------GAGAGGACACCACTG---------------------GTCTTCTGTCT i calJac3.chr3 C 0 I 1335 s cebCap1.NW_016107886v1 939097 145 - 2196201 CCCGGGAACAGCAAGGAGGCCA-GTGCAGCAGAGAGAG--AGAAAGCAAAGCAGACATTTGGAGAGCT-------CACCGTATTTTAAAAG--------------------------------ATTTGTGGCCATGTTTATTTGGATTTGGTTATAAGGGT----------GATAGGACACCACTG---------------------GTCTTCTGttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3331997 145 - 5030052 CCCGGTAACAGCAAGGAGGCCA-GTGCAGGAGGGAGAC--AGAAAGCAAAGCAGACATTTGGAGAGGT-------CACCAAATTTTAAAAG--------------------------------ATTTGTGGCCATGTTTATTTAGATTTGGTTATAAGAGT----------CATAGGACACCACTG---------------------GTCTTCTGttt i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86511188 96 - 129401213 -----TAAAGTCATACATACCATAGATAGTTTGGGTGGTAAG-AATAACAGGAAGCCATTGGAGA--------------------------------------------------------------------ATGCTCA----GAC-------AAAGAAT----------GTCAGATTATGGCAC---------------------ATCTT------ i mm10.chr8 C 0 I 1 s canFam3.chr16 16874666 175 - 59632846 tcaagtaacacccagaa---ca-atgtagcaaggacag--ag-gagcaaaggagaaatttggggaaggagccagaggccacatttttaaag--------------------------------ttttagagcactggtta----gatttggtattaagaataatgagaggccacaggagaccattaagcaaaggagtgacatagtgtgacttgggctt i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=255.000000 s hg38.chr4_KI270789v1_alt 31900 1 + 205944 -T s panTro5.chr4 192824052 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708649 1 + 195804263 -T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744492 1 + 4876863 -T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630167 1 + 115148730 -C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915157 1 + 190429646 -T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862607 1 + 189454096 -T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243937 1 - 25927173 -T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278945 1 + 4669795 -T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236325 1 + 135778131 -T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666002 1 - 2847728 -T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796337 1 + 2368649 -T i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 939242 1 - 2196201 -t i cebCap1.NW_016107886v1 C 0 I 1370 s aotNan1.NW_018492112v1 3332142 1 - 5030052 -t i aotNan1.NW_018492112v1 C 0 I 1329 s canFam3.chr16 16874841 1 - 59632846 g- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511284 1 - 129401213 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=83368.000000 s hg38.chr4_KI270789v1_alt 31901 16 + 205944 AAAGAC----ACCTCTCGCT s panTro5.chr4 192824053 16 + 194502333 AAAGAC----ACCTCTCGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708650 16 + 195804263 AAAGAC----ACCTCTCGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744493 16 + 4876863 AAAGAC----ACCTCTCGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630168 16 + 115148730 AAAGAC----ACCTCTTGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915158 20 + 190429646 AAACACAGCAACCTCTCGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862608 20 + 189454096 AAACACAGCAACCTCTCGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243938 20 - 25927173 AAACACAGCAACCTCTCGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3278946 20 + 4669795 AAACACAGCAACCTCTCGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134236326 16 + 135778131 AAAGAC----ACCTCTTGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666003 20 - 2847728 AAACACAGCAACCTCTCGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 796338 16 + 2368649 AAAGAC----ACCTCTCGCT i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86511285 16 - 129401213 AAAGCC----ACTGGGTGGT i mm10.chr8 I 1 C 0 s canFam3.chr16 16874842 16 - 59632846 aaaagc----ccctcttgct i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e otoGar3.GL873580 11184658 210 - 11315646 I a score=708512.000000 s hg38.chr4_KI270789v1_alt 31917 125 + 205944 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGTACAGGTGAACCATGTTTGTG-----------------------------------------------------------tct--gaggtaga-tgcccagcaagatgagatg-tgcaaggtccatctacataactgtgaaggacaaaggga s panTro5.chr4 192824069 124 + 194502333 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGTACAGGTGAACCATGTTTGTG-----------------------------------------------------------tct--gaggtaga-tgcccagcaagatgagatg-tgcaaggtccatctacataactgtgaaggacaaagg-a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708666 125 + 195804263 -----------GCTACAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGTACAGGTGAACCATGTTTGTG-----------------------------------------------------------tct--gaggtaga-tgcccagcaagatgagatg-tgcaaggtccatctacataactgtgaaggacaaaggga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744509 125 + 4876863 -----------GCTATAGTGGG-----------AGGAAGGAAAAATATTAGCATCCGGTACAGGTGAACCATGTTTGTG-----------------------------------------------------------tct--gaggtaga-tgcccagcaagatgagatg-tgcaaggtccatctacataactgtgaaggacaaaggga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630184 127 + 115148730 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGTGCAGGTGAACCATGTTTGTG-----------------------------------------------------------tctgagaggtaga-tgccaagcaagatgagatg-tgcaaggtccgtctacataactgtgagggacaaaggga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915178 127 + 190429646 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACCATGTTTGTG-----------------------------------------------------------TTTGAGAGGCAGA-TGCCACGCAAGATGTGATG-TGCAAGGTCCATCTACATAACTGTGAAGGACAAAGGGA i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187862628 127 + 189454096 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACCATGTTTGTG-----------------------------------------------------------TTTGAGAGGCAGA-TGCCAAGCAAGATGTGATG-TGCAAGGTCCATCTACGTAACTGTGAAGGACAAAGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24243958 127 - 25927173 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACCATGTTTGTG-----------------------------------------------------------TTTGAGAGGCAGA-TGCCACGCAAGATGTGATG-TGCAAGGTCCATCTACGTAACTGTGAAGGACAAAGGGA i macNem1.NW_012013133v1 C 0 I 3 s cerAty1.NW_012001672v1 3278966 127 + 4669795 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACCATGTTTGTG-----------------------------------------------------------TTTGAGAGGCAGA-TGCCAAGCAAGATGTGATG-TGCAAGGTCCCTCTACGTAACTGTGAAGGACAAAGGGA i cerAty1.NW_012001672v1 C 0 I 6 s chlSab2.chr7 134236342 125 + 135778131 -----------ACTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACGATGTTTGTG-----------------------------------------------------------tctgagaggcaga-tgccaagcaagatgagacg-tgcaaggtccatctacataac--tgaaggacaaaggga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666023 127 - 2847728 -----------GCTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAGGTGAACCATGTTTGTG-----------------------------------------------------------TTTGAGAGGCAGA-TGCCAAGCAAGATGTGATG-TGCAAGGTCCGTCTACGTAACTGTGAAGGACAAAGGGA i manLeu1.NW_012102221v1 C 0 I 3 s colAng1.NW_012116221v1 796354 127 + 2368649 -----------ACTATAGTGGG-----------AGGAAGGAGAAATATTAGCATCAGGCACAAGTGAACCATGTTTGTG-----------------------------------------------------------tctgagaggcaga-tgccaagcaagatgagatg-tgcaaggtccatctacataactgtgaaggacaaaggga i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11184868 110 - 11315646 -----------gctgacctggt-----------agacaggaaaagtatgacagccagggactgttg----atgccagtc-----------------------------------------------------------cct--gcagtaggttgtctcagaagaagagcta----attggtcacctccat---------ggATccaggaa i otoGar3.GL873580 I 210 C 0 s mm10.chr8 86511301 109 - 129401213 -----------GCTGTCATTGGACATGACTGTTATGAGGAGGAAAGTTTAGAGAAACGTGTAAGAGAGATGTGCT--------------------------------------------------------------------------AA-TAAAAAATGAAACTGAATG-TTCAAGGGCCAT----------GTTAAGGATGAA---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16874858 198 - 59632846 tctaatggggaccgagtgtggg-----------aatagagagaaatattaggaTCAAGTACCCATGAAACATATTTGTGTTGGTTTAGGTCttcttcttcttcttttttttttttgtttttttttgtttAGGTCTtcttctgaaaagcaaa-tgccaaacaggattaggtattacaagatatatctaaataactgacaagaatttagaga i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I a score=2959.000000 s hg38.chr4_KI270789v1_alt 32042 3 + 205944 acg- s panTro5.chr4 192824193 3 + 194502333 gtg- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708791 3 + 195804263 gtg- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744634 3 + 4876863 gtg- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630311 3 + 115148730 gtg- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187862755 3 + 189454096 GTG- i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134236467 3 + 135778131 gtg- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796481 3 + 2368649 gtg- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11184978 3 - 11315646 gca- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16875056 3 - 59632846 -tag i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511410 0 - 129401213 C e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e rheMac8.chr5 188915305 3 + 190429646 I a score=35712.000000 s hg38.chr4_KI270789v1_alt 32045 15 + 205944 ggggcagaggcaggg s panTro5.chr4 192824196 15 + 194502333 ggggcagaggcaggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708794 15 + 195804263 ggggcagaggcaggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744637 15 + 4876863 ggggcagaggcaggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630314 15 + 115148730 ggggcagaggcaggc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134236470 15 + 135778131 ggagcagaggaaggc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796484 15 + 2368649 agagcagaggaaggc i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11184981 15 - 11315646 gagggagaggtggtg i otoGar3.GL873580 C 0 I 364 s mm10.chr8 86511410 11 - 129401213 ----CAAAGTTGGAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16875059 15 - 59632846 ggagcaggagtaggc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I a score=506342.000000 s hg38.chr4_KI270789v1_alt 32060 240 + 205944 aggggaagccttcagacagttg-tgccagtggga-gaccttgaaaggagaggtgagctcggacagcctgagacccagcatagtgctgaggaggtgctggcaaggccaatgggggccgcctgggaaaagctgctctctagaagaatcctgttccaggcatgaatagccttgacctagtcctc--tct---cctag--gactggg-----------aagagcct----------------------gggagagggtggcctggtagtcaggaaagagtggcagc s panTro5.chr4 192824211 236 + 194502333 aggggaagccttcagacagttg-tgccagtggga-caccttgaaaggagaggTAAGCTCGGACAGCCTGAGACCCAGCATAGTGCTGAGGAGGTGCTGGCAAGGCCAATGGGGGCCGCCTGGGAAAAGCTGCTCTCTAGAAGAATCCTGTTCCAGGCATGAATAGCCTTGACCTAGTCCTC--TCT---CCTAG--GACTGGG-----------AAGAGCCT----------------------GGGAGAGGGTGGCCTGGTAG----Gaaagagtggcagc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192708809 236 + 195804263 aggggaagccttcagacagttg-tgccagtggga-caccttgaaaggagaggTAAGCTCGGACAGCCTGAGACCCAGCATAGTGCTGAGGAGGTGCTGGCAAGGCCAATGGGGGCCGCCTGGGAAAAGCTGCTCTCTAGAAGAATCCTGTTCCAGGCATGAATAGCCTTGACCTAGTCCTC--TCT---CCTAG--GACTGGG-----------AAGAGCCT----------------------GGGAGAGGGTGGCCTGGTAG----Gaaagagtggcagc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744652 240 + 4876863 aggggaagccttcagacagttg-tgccagtggga-caccttgaaaggagaggtgagctcggacagcctgagacccagcatagtgctgaggagatgctggcaaggccaatgggggccgcctgggaaaagctgctctctagaagaatcctgttccaggcatgaatagccttgacctagtcctc--tct---cctag--gactggg-----------aagagcct----------------------gggagagggtggcctggtagtcaggaaagagtggcagc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630329 240 + 115148730 aggggaagccttcagacagttg-tgccagtggga-caccttgaaaggagagGTGAGCTCGGACAGCCTGAGACCCAGCATAGTGTTGAGGAGATGCTGGCAAGGCCAATGGGGGCCGCCAGGGAAAAGCTGCTCTCTAGAAGAATCCTGTTCCAGGCATGAATAGCCTTGACCTAGTCCTC--TCT---CCTAG--GACTGAG-----------AAGAGCCT----------------------GGGAGAGGGTGGCCTGGTAGTCAGGaaagagtggcagc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134236485 240 + 135778131 aggggaagccttcagacagtgg-tgccagtggga-caccttgaaaggagaggtgagctcggacagcctgagacccagcacagcgctgaggaggtgctggcaaggccaacggtggccgcctgggaaaagctgctctctggaagaatcctgtgtcaggcatgaatagccttgacctagtcctc--tct---cctag--gactggg-----------gagagcct----------------------gggagagggtggtccggtagtcaggaaagagtggcagc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796499 262 + 2368649 aggggaagccttcagacagttg-tgccaatggga-caccttgaaaggaaaggtgagctcggacagcctgagacccaacatagtgctgaggaggtgctggcaaggccaatgggggccgcctgggaaaagctgctctctagaagaatcctgtttcaggcatgaatagccttgacctagtcctc--tct---cctag--gactggg-----------cagagcctgggagagggtggtctgatagtcgggagagggtggtctggtagtcgggagagggtggcagc i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86511421 232 - 129401213 AGGAAGAGCCTTAAGACAGTCG-TGCAGCTGTAA-CAA---GAAAGGGGAGGTGA----------CAAAAGGACCA-TACAATTCAGTGAAGGTATCAGTGCGACCAATGAGAGGTCCTTAGCAGAAGGTTCTTTTCAGAGCAGCCTTACATCATGTAGTGGCAACTCTATTTCGGTTATC--TCTAAACCTAGTCATCTGGG-----------ATAAGCCCA---------------------GAGAAAGGGTGGCTTGTTAGCCATAAAAACATGGCAGC i mm10.chr8 C 0 I 54 s canFam3.chr16 16875074 231 - 59632846 agtaggagacttcagacagcagttgctaacaccatcaacctaaaaggagaggggagataagactgcc---------gcatggctctacaaaggtgtttgctagctcaatgggagtctcttagtagtag---------aga------ctaagtcaggtaggaataaccctgttctagtcttccttcc---cctgc--tactaagctgatcactgaaagagcct----------------------gaggaggaatggctttggagagacaaatgtatggcagc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I e otoGar3.GL873580 11184996 364 - 11315646 I a score=55560.000000 s hg38.chr4_KI270789v1_alt 32300 28 + 205944 tggggactgtcacctgcctgctccttgc s panTro5.chr4 192824447 28 + 194502333 tggggactgtcacctgcctgctccttgc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192709045 28 + 195804263 tggagactgtcacctgcctgctccttgc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744892 28 + 4876863 tggggactgtcacctgcctgctccttgc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630569 28 + 115148730 tggggactgtcacctgcctgctccttgc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134236725 28 + 135778131 tggggactgtcacctgcctgctccttgc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796761 28 + 2368649 tggggactgtcacctgcctgctccttgc i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16875305 22 - 59632846 tggaggctgtcagtcatattgt------ i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511653 54 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I e otoGar3.GL873580 11184996 364 - 11315646 I a score=234111.000000 s hg38.chr4_KI270789v1_alt 32328 118 + 205944 agcaggttcttgtgaagggagagccaatca-ggc-acctccatgggcaccaGAACGTGAGCGCTttggactagggtggaggtagt----ggaggtggtgaggtttt----------------------gccggggttctaatatat s panTro5.chr4 192824475 118 + 194502333 agcaggttcttgtgaagggagagccaatca-ggc-acctccatgggcaccaGAACGTGAGCGCTttggactagggtggaggtagt----ggaggtggtgaggtttt----------------------gccggggttctaatatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192709073 118 + 195804263 agcaggttcttgtgaagggagagccaatca-ggc-acctccatgggcaccaGAACGTGAGCGCTttggactagggtggaggtagt----ggaggtggtgaggtttt----------------------gccggggttctaatatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3744920 118 + 4876863 agcaggttcttgtgaagggagagccaatca-ggc-acctccatgggcaccaGgatgtgagcgctttggactagggtggaggtagt----ggaggtggtgaggtttt----------------------gccggggttctaatatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630597 119 + 115148730 agcaggttcttgtgaagggagagccaatcagggc-acctccatgggcaccaGAACGTGAGCACTttggactagggtggaggtagc----ggaggtggtgaggtttt----------------------gccggggttctaatatac i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134236753 118 + 135778131 agcaggttcttgtgaagggagaaccaatca-ggc-acctccatgggcatcaGAACGTGAgtgctttggactagggtggaggtagt----ggaggtggtgaggtttt----------------------gtcggggttctaatatat i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796789 94 + 2368649 agcaggttcttgtgaagggagagccaatca-ggc-acctccatgggcatcaGAACGGGAGTGCTTTGGACTAGG---------GT----GGAGGTGGTGAGGTTTT----------------------GTC--------------- i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86511707 113 - 129401213 AGCAGATTGTTTTGATATAGGATGTGACCA-AGCAACCTTTGTGGATATCAAAAGGTCGGGACTttggattttggtggtagtagtttaaaaatgtagtaagatttc-------------------------------caaataat- i mm10.chr8 I 54 C 0 s canFam3.chr16 16875327 130 - 59632846 gaca---tattgtgaagggccag--------gat-acctccatggccatcacaATATGgggggtttggactaggatgatagtagt----ggaggtagtgaaatttctagattaaagatgtaaaattagattaaagttctaatatat i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I e otoGar3.GL873580 11184996 364 - 11315646 I a score=410011.000000 s hg38.chr4_KI270789v1_alt 32446 174 + 205944 ttaaaggggagaaccaatgatatttactaaaaaataaaatgtgaaatgtcagaattctttgagttgagattttgggtgaatg----gttatgacaattcct--aatggaaattggaaaatatttggaaggaatgggtgtcaaggtcagata----aag-gcag----ataag------aaactgtttcaggcatg s panTro5.chr4 192824593 174 + 194502333 ttaaaggggagaaccaatgatatttactaaaaaataaaatgtgaaatgtcagaattctttgagttgagattttgggtgaatg----gttatgacaattcct--aatggaaattggaaaatatttggaaggaatgggtgtcaaggtcaggta----aag-gcag----ataag------aaactgtttcaggcatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192709191 174 + 195804263 ttaaaggggagaaccaatgatatttactaaaaaataaaatgtgaaatgtcagaattctttgagttgagattttgggtgaatg----gttatgacaattcct--aatggaaattggaaaatatttggaaggaatgggtgtcaaggtcaggta----aag-gcag----ataag------aaactgtttcaggcatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3745038 174 + 4876863 ttaaaggggagaaccaatgatatttactaaaaaataaaatgtgaaatgtcagaattctttgagttgagattttgggtgaatg----attatgacaattcct--aatggaaattggaaaatatttggaaggaatggatgtcaaggtcaggta----aag-gcag----ataag------aaactgtttcaggcatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630716 174 + 115148730 ttaaaggggagaactaacgatatttactaaaaaataaaatgtgaaatgtcagaattttttgagttgagattttgggtaaatg----gttatgacaattcct--gatggaaactggaaaatatttggaaggaatggatgtcaaggtcaggta----aag-gcag----ataag------aaactgtttcaggcata i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134236871 172 + 135778131 ttaaaggggagaaccaatgatatttgctaaaaaataaaatgtgaaatgtcaaaATACTTTAAGTTGAGATTTTGGGTTAAAG------TACGACAATTCCT--GATGGAAACtggaaaatatttggaaggaatggatgtcaaggtcaggta----aag-gcag----ataag------aaaccgtttcgggtgtg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 796883 167 + 2368649 -----AGGGAGAACCAATGATATTTGCTAAAAAATAAAATATGAAATGTCAGAATATTTTGAGTTGAGATTTTGGGTTAATG------TACAACAATTCCT--GATGGAAACtggaaaatatttggaaggaatggatgtcaaggtcagtta----aag-gcag----ataag------aaactgtttcgggtgtg i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11185360 159 - 11315646 ttacaggcatgaactactgagcttggcc---------------aagtatgagagatttttgactagagattctgggggaata----gttatgacaattcct--gataca-----gaaaagactaggaaggaatggatcacaaggtcacatggtgcagg-gcag----attgga-----aaactattctgggcaag i otoGar3.GL873580 I 364 C 0 s mm10.chr8 86511820 165 - 129401213 ttaa--gatagagccaatagtctttattgaagactaggatgtg---tgagagaTTTTTTTCCCTTGAGACCATGGGTCAATAAATAGTTATGATGGTTCTTTAGATGGA--------AATAGTTTGGAGGAATGGATTGCATAGTCAGATAAAG-AAG-GCAG----ATAGA-----------GTTTCAGATGTG i mm10.chr8 C 0 I 1433 s canFam3.chr16 16875457 180 - 59632846 tttgaggaaagaagcaacagtatttaccacaggataggatgtgaggtatgaggaatttctggcttgacatcctggataaatt----gttatgacaattcca-------aaaatggaaaagatttggaattaatgggttgcagagtaaggga----aggagcaggggtatagggaaagcaaactgttttgaacatg i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I a score=1058238.000000 s hg38.chr4_KI270789v1_alt 32620 483 + 205944 ttaagtctgatttaactattcaccatccacttcgatatgtgaca-atggcagctggatatattttactgggcggatggtggcctgt-ggtattccttcagctgccattgatggatagatggcttgtagagcgtgaagacc--atcgaggagcggagtacagctgaggaagagaacggggtacattcacgacaccccagtgctccgcagcatctagaaattgggataagaaaatggatctagcgagagagtagaagtagccagg-tagaag---------------aataagtagtttatataaaaagagagtgtctgactcagaaaataagtaatgcagatgaaaaggaggggatcgatttgagaaacatctacttaggattggattatgaagtaaagaaaggactttaagaaggaggcagttgtcacttgcttcaaatcctgacaagaggtggaaaggatgat-acctcaaatggatc-----actggatttagcagtgtggaggtcg s panTro5.chr4 192824767 483 + 194502333 ttaagtctgatttaactattcaccatccacttcgatatgtgaca-atggcagttggatatattttactgggcggatggtggcctgt-ggtattccttcagctgccattgatggatagatggcttgtagagcgtgaagacc--atcgaggagcggagtacagctgaggaagagaacggggtacattcacgacaccccagcgctccgcagcatctagaaattgggataagaaaatggatctagcaagggagtagaagtagccagg-tagaag---------------aataagtagtttatataaaaagagagggtctgactcagaaaataagtaatgtagatgaaaaggaggggatcgatttgagaaacatctacttaggattggattatgaagtaaagaaaggactttaagaaggaggcagtggtcacttgcttcaaatcctgacaagaggttgaaaggatgat-acctcaaatggatc-----actggatttagcagtgtggaggtta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192709365 483 + 195804263 ttaagtctgatttaactattcaccatccacttcgatatgtgaca-atggcagttggatatattttactgggcggatggtggcctgt-ggtattccttcagctgccattgatggatagatggcttgtagagcgtgaagacc--atcgaggagcggagtacagctgaggaagagaacggggtacattcacgacaccccagtgctccgcagcatctagaaattgggataagaaaatggatctagcaagggagtagaagtagccagg-tagaag---------------aataagtagtttatataaaaagagagggtctgactcagaaaataagtaatgtagatgaaaaggaggggatcgatttgagaaacatctacttaggattggattatgaagtaaagaaaggactttaagaaggaggcagtggtcacttgcttcaaatcctgacaagaggttgaaaggatgat-acctcaaatggatc-----actggatttagcagtgtggaggtta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3745212 483 + 4876863 ttaagtctgatttaactattcaccatccacttcgatatgtgaca-gtggcagttggatatattttactgggtggatggtggcctgt-ggtattccttcagctgccattgatggatagatggcttgtagagcgtgaagacc--atcgaggagcggagtacagctgaggaagagaacggggtacattcacgacaccccagtgctctgcagcagctagaaattgggataagaaaatggatctagcaagagagtagaagttgccagg-tagaag---------------aataagtagtttatataaaaagagagggtctgactcagaaaataagtcatgtagatgaaaaggaggggatcgatttgagaaacatctacttaggattggattatgaagtaaagaaaggacttcaggaaggaggcagtggtcacttgcttcaaatcctgacaagaggttgaaaggatgat-acctcaaatggatc-----actggatttagcagtgtggaggtca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112630890 483 + 115148730 ttaagtctgatgtaactactcaccatccacttggatacatgaca-atggtagttggatatattttactgggtggatagtggcctgt-ggtattcctttagctgccattgatggatagatggcttgtagagcatgaagacc--atcgaggagccgagtacagctgaggaagagaatggggtacattcacaacaccccagtgttctgcagcatctagaaattgggacaagaaaatggatctagcaagacagtagaagtagccagg-tagaag---------------aataagtagtttatataaaaagagagggtctgactcagaaaataagtcatgtagatgaaaaggaggggatagatttgagaaatatctacttaggattagattatgaagtaaagaaaggacttcaagaaggaggcaatggtcacttgcttcaaatcctgacaagaggttgaaaggatgat-acctcaaatggatc-----actggatttagcagtgtggaggtca i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134237043 470 + 135778131 ttaagtct-atttaactacggagcatccacttgggtatgtgacg-gtggcagtgggatatattttactgggcggatggtggcctgt-ggtattcctttaggtgccattgatgtatggatggcttgtagagcgtgaagacc--atcgaggaactgagtacagctgaggaagagaatggggtaaattcatgacaccccagtgccctgcagcatctagaaactgggataagaaaatggatctagcaagacagtagaagtagccagg-tagaag---------------AGTAAGTAGTTTATATAAAAAGAGAGGGTCTGACTCAGAAAATAAGTCACGTTGATGAAAAGGAGGGGATAGATTTGAGAAATATCTACCTAGGATTGGATTATGaagtaaagaaaggacttcgagaaagaggcaatggtcacttgcttcaaatcctgacaagaggttgaaaggatgat-acctgaaatggatc-----actggattcag------------ca i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 797050 483 + 2368649 ttaagtgtgatttaactactcagcatccacttggatatgtgaca-gtggcagttggatatattttactgggcggatggtggcctgt-ggtattcctttaggtgccattgatgtatggatggcttgtagagcgtgaagacc--gtcgaggaactgagtagagctgaggaagagaatggggtaaattcatgacaccccagtgctctgcagcatctagaaactgggataagaaaatggatctagcaagacagtagaagtagccagg-tagaag---------------aataaGTAGTTTATATAAAAAGAGAGGGTCTGACTCAGAAAATAAGTCATGTTGATGAAAAGGAGGGGATAGATTTGAGAAATATCTACCTAGGATTGGATTATGaagtaaagaaaggacttcgagaaggaggcaatggccaattgcttcaaatcctgacaagaggttgaaaggatgat-acctgaaatggacc-----actggatttagcagtgtggcggtca i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11185519 480 - 11315646 ggaaatctgatgtggttattcagcaaccaggtgggtctgttacagggggcaggtggctatgtctcaccagacacatgctgggctgtagacgcccacataggtggcgcagaaagagtgatggcttccaga--ctaacggccatatcgaggcaacaaatacacctggggaggataa--gaggaaagtcttaagccctggatactctacagcatctagaaattgggaaaaggaaaagaaattattggga---tagaattaggcaga-taggagaaatgagtgtagtataataaatagtataaat-atgagtgaggttgtgactcagagaacaagttatggagattaaaagg-ggagatagttttgtgaaatatctaccaag-----gattatcaagtaaacacagggcttcaagaagaagggaatg------------aaat--tgatgagaaggtaaaaggttggtgacctcaaagggattctgggattggatttagcatcatggaagtca i otoGar3.GL873580 C 0 I 158 s canFam3.chr16 16875637 423 - 59632846 ttaaacctcagatgattattaaacatctaagtagatatgttata-aa---aggcagatacatttcactaggtgaatattgagctatgggtattaaatttgcagtcacag-cagatagatggcttatagagtattatagtc--atctgtatggtgagcacagctggaaaggagaa----gatcattcatgagccctgagttcttta---tatctagaggttggaataagaaaaaggatctagccagatagtagaaatagccatattagagt---------------aataagtagtatatatcaaaagtgaatacctggctcagagatgaagccacacagatgaaaggg----------------------------------------------------aggacttcaagacagagagaatggtccaccatttcaaatactgatgagaggttaaaaggatgatgacctcaaatgaatc-----accgaatttagcagtatggaggtcg i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I a score=775936.000000 s hg38.chr4_KI270789v1_alt 33103 375 + 205944 gtggtaatg----------------------------------------------------ctgaca-------------------------------------------------------aaagtggtttcagtggaacact-gatgaaagcattattggagggaatgtaagacagaataagagagca--agtaaaggcagtgagcatag---aaactactcagaggaaatcggctgtaacaagaaacaag--atggagaattgc---tgtcctctcaagagagaggcttatgttttaagagagtgacaacacagcaagcttaaatgtttgtgggaaggctctcttagagaaggcaaaaacgtatgatccaggaggaaaaggggagaagcacatggg-aaaattcttagaggaatcaataagaggggatgggatctactccatg--tgaaatcagttttgctttagagacagcataagtaggtcacctgtttta s panTro5.chr4 192825250 375 + 194502333 gtggtaaca----------------------------------------------------ctgaca-------------------------------------------------------aaagtggtttcagtggaacact-gatgaaagcattattggagggaatgtaagacagaataagagagca--agtaaaggcagtgagcatag---aaactactcagaggaaatcggctgtaacaagaaacaag--atggagaattgc---tgtcctctcaagagagaggcttatgttttaagagagtgacaacacagcaagcttaaatgtttgtgggaaggctctcttagagaaggcaaaaacgtatgatccaggaggaaaaggggagaagcacatggg-aaaattcttagaggaatcaataagaggggatgggatctacttcatg--tgaaatcagttttgctttagagacagcataagtaggtcgcttgtttta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192709848 375 + 195804263 gtggtaaca----------------------------------------------------ctgaca-------------------------------------------------------aaagtggtttcagtggaacact-gatgaaagcattattggagggaatgtaagacagaataagagagca--agtaaaggcagtgagcatag---aaactactcagaggaaatcggctgtaacaagaaacaag--atggagaattgc---tgtcctctcaagagagaggcttatgttttaagagagcgacaacacagcaagcttaaatgtttgtgggaaggctctcttagagaaggcaaaaacgtatgatccaggaggaaaaggggagaagcacatggg-aaaattcttagaggaatcaataagaggggatgggatctacttcatg--tgaaatcagttttgctttagagacagcataagtaggtcgcttgtttta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3745695 375 + 4876863 gtggtaaca----------------------------------------------------ctgaca-------------------------------------------------------aaagtggtttcagtggaacact-gatgaaagcattattggagggaatgtaagacagaataagagagca--agtaaaggcagtgagcatag---aaactactcagaggaaatcggctgtaacaagaaacaag--atggagaattgc---tgtcctctcaagagagaggcttttgttttaagagagtgacaacacagcaagcttaaatgtttgcgggaaggctctcttagagaaggcaaaaacgtatgatccaggaggaaaaggggagaagcacatggg-aaaattcttagaggaatcaataagaggggatgggatctacttcacg--tgaaatcagttttgctttagagacaacataagtaggtcgcctgtttta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112631373 378 + 115148730 gtggtaaca----------------------------------------------------ctgaca-------------------------------------------------------gaagcggtttcagtggaacact-gatgaaagcattattggagggaatgtaagacagaacaagagagca--agtaaaggcagtgagcatag---aaactactcagaggaaatcggctgtaacaagaaacaag--atggagaattgctattgtcctctcaagagagaggctttggttttaagagggtgacatcacagcaggcttaaatgtttatgggaaggctctcttagagaaggcaaaaacatatgatccaggaggaaaaggggagaagcacatggg-aaaattcttagaggaatcaataagaggggatgggatctacttcatg--tgaaatcagttttgctttagagacaacctaagtaggtcgcctgtttta i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134237513 374 + 135778131 gtggtaaga----------------------------------------------------ctaaca-------------------------------------------------------aaggcagtttccgtggaacatt-gat-aaagcattattggagggaatgtaagacagaatgagagagca--agtaaaggcagtgagcgtag---aaactactc--agggaatcggctgtaacaagaaacgag--atggagaattgctgttgtcctttcaagagagagagatttgttttaggagggtgacatcacagcaggcttaaatgtttatggaaaggctc-cttagagaaggcaaaagcatatgattcaggaggaaaaggggagaagcacatggg-aagattcttagaggaatcaataaaaggggatggaatctacttcata--tgaaatcagtgttgccgtagagacaacggaagtaggtcacctatctca i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 797533 375 + 2368649 gtggtaaga----------------------------------------------------ctgaca-------------------------------------------------------aaggcactttcagtggaacatt-gatgaaagcattattggagggaatgtaagacagaataagagagca--agtaaaggcagtgagcatag---aaactactc--agggaatcggctgtaacaagaaacaag--atggagaattgctgttgtcctctcaagagagagggatttgttttaggagggtgacatcacagcaggctttaatgtttacggaaaggctc-cttagagaaggcaaaagcgtatgatccaggaggaaaaggggagaagcacgtggg-aagattcttagaggaatcaataaaaggggatggaatctacttcctg--tgaaatcagtgttgccgtagagacaacggaagtaggtcacctgcctca i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11186157 438 - 11315646 gtggtaacatacgcctgtagtcgcagctactcaggaggctgaggcaggaggaccctttgagccaacaagtctgggtttactgggcaacagagtgagaatctgtttcaaaaaagaaaaaagggaaaatggtttcaatggaatattggataaaaggtgtattggagagaatgtaaagaag------------------gaggcagtgatgatgggaaaaattatttgcag------------aacaggaaacaagaaatagagaattgctattgccctgtcaacagaaagttttgttttataacaggg-gacattccagtgtgtttagatgcttatggaaatgaattcttagagaaggcaaag--ttatgacctacaagaggaaggggagctccaaatgag-aaaatttttgaatgaaaggacagaagggggtgggatc-----------------cagcttggcctttggtgcagcacaggtag------tgtatt- i otoGar3.GL873580 I 158 C 0 s canFam3.chr16 16876060 367 - 59632846 gtggtgaca----------------------------------------------------ttgaca-------------------------------------------------------aaagtggtttcagtggaatgtaggctgaaagactttttgtcaagaatataagagagaacaaaaagaaaggagtagagaca-tgaagatag---aaactattttgaggaattctgctgtaataaggaacaagaaatggggaattgtgattgtcctgtcaagggagagg-----atttaagatgggtgatagtatagcatgtttagacgcttataggcctgatctattagaa-----taaaatgtatggtccaggacagaaaggggaggactgcatgaacaaaattcttaaaaaaat-----gaagggaataggatccagaacatgaatgagacaattttgatcacag---caacaaaggtggttcatctatTTTA i canFam3.chr16 C 0 I 21 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I a score=509552.000000 s hg38.chr4_KI270789v1_alt 33478 250 + 205944 ccaggaggagaggcaaagcgcacaggtccagtgcagctgaagtggtttcctcgctagtggaaatttgtagacattctcttctgattgctttcaaacttctcagtgaaataaggatcaa-gtcacagttaggcaaagaggtgcggggcgggcatggtggagagttgagaaggggtggtgtgaaagtcactttggt-gga--gggagagtaaatgaacttaatgactcttgtgacactgttgggcagtcctgagtg s panTro5.chr4 192825625 250 + 194502333 ccagaaggagaggcaaagcgcacaggtccaatgcagctgaagtggtttcctcgctagtggaaatttgtagacattctcttctgattgctttcaaacttctcagtgaaataaggatcaa-gtcacagttaggcaaagaggtgcggggtgggcatggtggagagttgagaaggggtggtgtgaaagtcactttggt-gga--gggagagtaaatgaacttaatgactcttgtgacactgttgcgcagtcctgagtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192710223 250 + 195804263 ccagaaggagaggcaaagcgcacaggtccaatgcagctgaagtggtttcctcgctagtggaaatttgtagacattctcttctgattgctttcaaacttctcagtgaaataaggatcaa-gtcacagttaggcaaagaggtgcggggtgggcatggtggagagttgagaaggggtggtgtgaaagtcactttggt-gga--gggagagtaaatgaacttaatgactcttgtgacactgttgcgcagtcctgagtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3746070 250 + 4876863 ccaggaggagaggcaaagcgcacaggtccaatgcagctgaagtggtttattcgctagtggaaatttgtagacattctcttctgattgctttcaaacttctcagtgaaataaggatcaa-gtcacagttaggcaaagaggtgcggggtgggcatggtggagagttgagaaggggtggtgtgaaagtcactttggt-gga--gggagagtaaatgaacttaatgactcttgtgacactgttgggcagtcctgagtg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112631751 252 + 115148730 ccaggaggagaggcaaagtgcacaggtccaatgcggctgaagtggtttacttgctagtggaaatttgtggacattctcttctgattgctttcaaacttctcagtgaaataaggatcaaggtcacaattaggcaaagaggtgtggggtgggcatggtggagagttgagaaggggtggggtgaaagtcactttggtggga--gggagagtaaatgaacttcatgactgttgtgtcactgttgggcagtcctgagag i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134237887 254 + 135778131 ccaggaggagaggcaacgcgcacaggtctgacgcggcggaagtggtttacttgctagtggaaatttgtagacattctcttctgattgctttcagacttctcagtgaaataaggatcaaggtcacaattaggcaaagaggtgtggggtgggcatggtggagagttgagaaggggtagtgtgaaagtcactttagtgggagggggggagtaaatgaacttaatgactgctgtgactctgttgggcagtcctgagtg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 797908 252 + 2368649 ccaggaggagaggcaacgcgcacaggtccgacgcagcggaagtggttcactcgctagtggaagtttgtagacattctcttctgattgctttcaaacttctcagtggaataaggatcaaggtcacaattaggcaaagaggtgtggggtgggcatggtggagagttgagaaggggtggtgtgaaagtcacttcggtggga--gggggagtaaatgaactgaatgactgctgtgactctgttgggcagtcctgagtg i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11186595 247 - 11315646 ttaataggacaggcagagtgttcaggccaggcacagttgaatcatgtcacttgatcatggaagtttatagacattctgttctgattgttttctagtttttccgtgaaataaggctcaaggtcatttttaagaagagagccgtggagtaggcattttgaaggcttgaggagaaagggtgtcaaagtcacttaggagggt--ggaacattcaagggattaaatga-----atgtaacagctgggcTGGCCCAAGTG i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I a score=1197489.000000 s hg38.chr4_KI270789v1_alt 33728 679 + 205944 cctgcttgagttcattcctgtatatttaacgtgaggccaaccagcaggtttaatgtttttctgtattcatttccaagtccttgggtgtgagcacaaacaggcacaggccatatgtaatcattgtggtggttttactaggcagatgtggcacaggaaaaagggcaaggtaatcgagagtaaatagaagggggtggtgacaatgactgatgtaagattgacgctgggaaatgaaggaactgagagctggaggggtgcaattaatagagtgcgggctttgtgggttcaaaatatttagaatgggggccaaaacgctgaaggagacagcaagaaaagattatggaggagacagagtgagtctggatatgaaaaaaagtccagcgtgttatcacaagagacaaactggaagaggctagatgagcagaatagaggacaaagaaccaagagtcctgggtattggtaaaacctgctgtggtctggatgcttgtgtccctctagattcctatgttgaaaccctcatctccaaggtgatggcattaggaggcggggccttttgggatgcgacgggatcatgagggcagaacccttgtgagtgaagttcatgccttatacaagaaagcctagggccttctttcctctccaccgtgaggatgcagtgtgcagtgaactaggtagcgggctg s panTro5.chr4 192825875 679 + 194502333 cctgcttgagttcattcctgtatatttaacgtgaggccaaccagcaggtttaatgtttttctgtattcatttccaagtccttgggtgtgagcacaaacaggcacaggccatatgtaatcattgtggtggttttactaggcagatgtgacacaggaaaaagggcaaggtaatcgagagtaaatagaagggggtggtgacaatgactgatgtaagattgacgctgggaaatgaaggaactgagagctggaggggtgcaattaatagagtgcgggctttgtgggttcaaaatatttagaatgggggccaaaacggtgaaggagacagcaagaaaagattatggaggagacagagtgagtctggatatgaaaaaaagtccagcatgtgatcacaagagacaaactggaagaggctagatgagcagaatagaggacaaagaaccaagagtcctgggtattggtaaaacctgctgtggtccggatgcttgtgtccctctagattcctatgttgaaaccctcatctccaaggtgatggcattaggaggcggggcgttttggggtgcgacggtatcatgagggcagaacccttgtgagtgaagttcatgccttatacaagaaagcctagggcgttctttcctctccaccgtgaggatgcagtgtgcagtgaactaggtagcaggctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192710473 679 + 195804263 cctgcttgagttccttcctgtatatttaacgtgaggccaaccagcaggtttaatgtttttctgtattcatttccaagtccttgggtgtgagcacaaacaggcacaggccatatgtaatcattgtggtggttttactaggcagatgtgacacaggaaaaagggcaaggtaatcgagagtaaatagaagggggtggtgacaatgactgatgtaagattgacgctgggaaatgaaggaactgagagctggaggggtgtaattaatagagtgcgggctttgtgggttcaaaatatttagaatgggggccaaaacggtgaaggagacagcaagaaaagattatggaggagacagagtgagtctggatatgaaaaaaagtccagcatgtgatcacaagagacaaactggaagaggctagatgagcagaatagaggacaaagaaccaagagtcctgggtattggtaaaacctgctgtggtccggatgcttgtgtccctctagattcctatgttgaaaccctcatctccaaggtgatggcattaggaggcggggcgttttggggtgcgacggtatcatgagggcagaacccttgtgagtgaagttcatgccttatacaagaaagcctagggcgttctttcctctccaccgtgaggatgcagtgtgcagtgaactaggtagcaggctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3746320 678 + 4876863 cctgcttgagttcattcctgtatatttaacatgaggccaaccagcaggtttaatgtttttctgtattcatttccaagtccttgggtgtgagcacaaacaggcacaggccatatgtaatcattgtggtggttttactaggcagatgtgacacaggaaaaagggcaaggtaatcgagagtaaatagaagggggtggtgacaatgactgatgtaagattgacgctgggaaatgaaggaactgagagctggaggggtgcaattaatagagtgcgggctttgtgggttcaaaatatttagaatgggggccaaaacggtgaaggagacagcaagaaaagattatggaggagacagagtgagtctggatatg-aaaaaagtccagcgtgtgatcacaagagacaaactggaagaggctagatgagcagaatagaggacaaagaaccaagagtcctgggtattggtaaaacctgctgtggtccggatgcttgtgtccctctagattcctatgttgaaacgctcatctccaaggtgatggcattaggaggcggggccttttgggatgcgacgggatcatgagggcagaacccttgtgagtgaagttcatgccttatacaagaaagcccagggccttctttcctctccaccgtgaggatgcagtgtgcagtgaactaggtagcgggctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112632003 674 + 115148730 cc----tgagttcattcctgtatgtttaatgtgaggccaaccagcaggtttagtgtttttctgtattcatttccaagtccttgggggtgagcacagacaggcacaggccatatgtaatcattgtggtggttttactaggcagatgtgacacaggaagaagggcaaggtaatcgagagtaaatagaagggggtggtgacaatgactgacgtaagattgacactgggaaatgaaggaactgagagctggaggggtgcaattaatagactgtgggctttgtgggttcaaaatatttagaatgggggccaagacggtgaaggagacagcaagaaaagattatggaggagacagagtgagtctggatatg-caaaaagtctagcatgtgatcatgagagatgaactggaagaggctagatgagcagaatagaggacaaagaaccaagagttctgggtatcggtaaaacctgctgtggtctggatgcttgtgtccctccagattcctatgttgaaaccctcatctccaaggtgatggtattaggaggtggggccttttgggatgcgatggggtcatgagggcagaactctcgtgagtgaagttcttgccttatacaagagagcccagagccttcttgcctctccaccgtgagggtgcagtgtgcagtgaactaggcagtgggctg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134238141 672 + 135778131 cc----tgagttcattcctgcatat-taacgtgaggccagccagcaggtttaatgtttttctggattcatttccaagtccttgggtgtgagcacaaataggcagaggccgtatgtaatcgttgtggtggttttactaggcagatgtgacacaggaaaaagcgcgaggtaatcgagaggaaatagaagggggtggtgacaatgaccgatgtaagattgacactgggaaatgaaagaactgagagctggaggagtgCAATTAATAGACTGTGGGCTTTGTGGGTTCAAAATATTTAGAATGGGGGCCAAAACGGTGAAGAAGACAGCGAGAAAAGATTATGGGGGAGACAGAGTGAGTCTGGATATGTGAAAAAGTCTGGCGTGTGATCACTGAAGATGAACTGGAAGAGGCTAGATGACCAGAATAGAGGACAAAGAACCAAGAGCCCTGGGTATCAGTAAGACCTGCTG-ggtccgaatgcttgtgtccctccagattcctatgttgaaaccctcatctccaaggtgatggctttaggcggtggggctttt-gggatgtgatggagtcatgagggcagaaccctcgtgagtgaagttcacgccttatacaggagagtccagaggcggctttcctctccaccgtgaggatgcagtgcgctgtgaacgaggcggcgggctg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 798160 676 + 2368649 cctgcttgagttcattcctgtatatgtaatgtgaggccaaccagcaggtgtaatgtttttctggattcatttccaagtccttgggtgtgagcacaaacaggcagaggccatatgtaatcatcgtggtggttttactaggcagatgtgacacaggagaaagcgcgaggtaaccgagaggaaatagaaggggatggtgaccacgaccgatgtaagattgatgctgggaaatgaaagaactgagagctggaggggtgCAATTTATAGACTGTGGGCTTTGTGGGTTCAAAATATTTAGAATGGGGACCAAAACGGTGAAGGAGACA--AAGAAAAGATTCTGGGGGAGACAGGGTGAGTCTGGATATGCGAAAAAGTCTAGCGTGTGATCACGAGAGATGAACTGGAAGAGGCTAGATGAGCAGAATAGAGGATAAAGAACCATGAGCCCTGGGTATCGGTAAAACCTGCTG-ggtccgaatgcttgtgtccctccagattcctgtgttgaaaccctcatctccaaggtgatggcattaggcggtggggcctttggggatgtgatggggtcatgagggccgaaccctcgtgagtgaagttcgtgcctgatacaggagagtccagaggcttctttcctctccaccgtgaggatgcagtgcgctgtgaaccaggcagcgggctg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 13049922 1267 - 14256875 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=50422.000000 s hg38.chr4_KI270789v1_alt 34407 21 + 205944 tcaccagacaccacacctgcc s panTro5.chr4 192826554 21 + 194502333 tcaccagacaccacacctgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192711152 21 + 195804263 tcaccagacaccacacctgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3746998 21 + 4876863 tccccagacaccacacctgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112632677 21 + 115148730 tcaccagacaccacacctgcg i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134238813 21 + 135778131 tcaccagacaccacaccttcc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 798836 21 + 2368649 tcaccagacaccacaccttcc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 1205685 21 + 14256875 tcaccagacaccacacctgct i saiBol1.JH378165 T 15638 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e manLeu1.NW_012102221v1 2666150 3 - 2847728 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e macNem1.NW_012013133v1 24244085 3 - 25927173 I e macFas5.chr5 187862758 0 + 189454096 C e rheMac8.chr5 188915305 3 + 190429646 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=19800.000000 s hg38.chr4_KI270789v1_alt 34428 3 + 205944 ggc s panTro5.chr4 192826575 3 + 194502333 ggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192711173 3 + 195804263 ggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3747019 3 + 4876863 ggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112632698 3 + 115148730 ggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915308 3 + 190429646 ggc i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187862758 3 + 189454096 ggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24244088 3 - 25927173 ggc i macNem1.NW_012013133v1 I 3 C 0 s chlSab2.chr7 134238834 3 + 135778131 ggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666153 3 - 2847728 ggc i manLeu1.NW_012102221v1 I 3 C 0 s colAng1.NW_012116221v1 798857 3 + 2368649 ggc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 1205706 3 + 14256875 ggc i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e cerAty1.NW_012001672v1 3279093 6 + 4669795 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=4411370.000000 s hg38.chr4_KI270789v1_alt 34431 678 + 205944 acctggatctcaaactct-ccagcctccagaactgtgaggaagacattactgttgttcataaaccacccaatctacagtattttgctacagcagccaaaatggacgaagacagatcatttacacgggtagaaaaatcaccaggaatagcgatggtgagaaaaacagcaagccagacacaagaatcacccgtgatgaagggg-------atggtaaatg---actagggagagtgacagaaggcccagtcccctgaca---------------------tgagccttgatggaac---------------tggagcttttagcaggaaccagggcaaatgggcttgaggcag-cCCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACAGCCCTCAGTTGACAGtgtagtactttcctaggacttctgtagcaaaacaccatgcacttaatgccttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcaatgggccaaaatcagggtgtcagcactgtcaccctcccttggtggctccataaggaaaccggttccttgtctctcagcttctggtgactgccagcattcattggcttgtggccacatcactccaatatttagggtcaaca-ttttttgatctccctctgctctgtcttcatatctctttctcctctgtgtgccctaaaatctccctcctcatct s panTro5.chr4 192826578 679 + 194502333 acctggatctcaaactcttccagcctccagaactgtgaggaagacattattgttgttcataaaccacccaatctatggtatttcgctacagcagccaaaatggactaagacagatcatttacatgggtagaaaaatcaccaggaatagcgatggtgagaaaaacagcaagccagacacaagaatcacccgtgatgaagggg-------atggtaaatg---actagggagagtgacagaaggcccagtcccctgaca---------------------tgagccttgatggaac---------------tggagcttttagcaggaaccagggcaaatgggcttgaggcag-cCCAGTAGTGTGCATGGTGTGAAAGGGAAAAACAGCCCTCAGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccatgcacttaatgccttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcaatgggccaaaatcagggtgtcagcactgttaccctcccttggtggctccataaggaaaccggttccttgtctcccagcttctggtgactgccagcattcattggcttgtggccacatcactccaatatttagggtcaaca-ttttttgatctccctctgctctgtcttcatatctctttctcctctgtgtgccctaaaatctccctccttgtct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192711176 678 + 195804263 acctggatctcaaactct-ccagcctccagaactgtgaggaagacattactgttgttcataaaccacccaatctatggtatttcgctacagcagccaaaatggactaagacagatcatttacatgggtagaaaaatcaccaggaatagcgatggtgagaaaaacagcaagccagacacaagaatcacccgtgatgaagggg-------atggtaaatg---actagggagagtgacagaaggcccagtcccctgaca---------------------tgagccttgatggaac---------------tggagcttttagcaggaaccagggcaaatgggcttgaggcag-cCCAGTAGTGTGCATGGTGTGAAAGGGGAAAACAGCCCTCAGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccatgcacttaatgccttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcaatgggccaaaatcagggtgtcagcactgttaccctcccttggtggctccataaggaaaccggttccttgtctctcagcttctggtgactgccagcattcattggcttgtggccacatcactccaatatttagggtcaaca-ttttttgatctccctctgctctgtcttcatatctctttctcctctgtgtgccctaaaatctccctccttgtct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3747022 678 + 4876863 acctggatctcaaactct-ccagcctccagaactgtgaggaagacattactgttgttcataaaccacccaatctacggtattttgctacagcagccaaaatggactaagacagatcatttacatgggtagaaaaatcaccaggaatagcgatggtgagaaaaacagcaagccagacacaagaatcacccgtgatgaagggg-------atggtaaatg---actagggagagtgacagaaggcccagtcccctgaca---------------------tgagccttgatggaac---------------tggagcttttagcaggaaccagggcaaatgggcttgaggcag-cCCAGTAGTGTGCAGGGTATGAAAGGGAAAAACAGCCCTCAGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccatgcacttaatgccttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcactgggccaaaatcagggtgtcagcactgtcaccctcccttggtggctccataaggaaaccggttccttgtctctcagcttctggtgactgccagcattcattggcttgtggccacatcactccaatatttagggtcaaca-ttttttgatctccctctgctctgtcttcatatctctttctcctctgtgtgccctaaaatctccctcctcatct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112632701 682 + 115148730 acctgaatctcaaactct-ccagcctccagaaccgtgaggaagatatttctgttgttcataaaccatccaatctatggtattttgttacagcagccaaaatggactaagacagatcgtttacacgggtagaaaaatcaccaggaatagtgatggcaagaaaaacagcaagccagacacaagaaccacccatgatgaagggg-------atggtaaatgactactagggagagtgacagaaggctcagtcccctgaca---------------------tgagccttgatggaac---------------tggagcttttagcaggaaccagggcaaatgggcttgaggcag-cTCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACAGCCCTCAGTTGACAGtgcagtactttcctagggcttctgtagcaaaacaccatgcacttgatggcttcaatcaacaaacatttattctctcacaattatgaaggccagatgtctgcagtcagtatcactgggccaaaatcagggtgtcagcactgtcactctcccttggtggctccatagggaaactggtttcttgtctctcagcttctggtgactgccagcattctttggcttgtggccacatcgctccaatctttagggtcaacattttttttatctccctctgctctgtcttcatatctctttctcctctgtgtgtcctaaaatctccctccttgtct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188915311 714 + 190429646 acctggatctcaaactct-tcagcctccagaactgtgaggaagacatttctgttgttcccaaaccacccaatctatggtattttgttacagcagccagaatggactaagacaGATTGTTTACCCGGGTAGaaaaatcaccaggaatagtgatggcgagaaaaacagcaagctagacgcaagaaccacccataatgaagggg-------atggcaaatg---actagggagagtgacagaaggcccagtcccctgacatgagctttgatggaactgacatgagctttgatggaactgacatgagctttgatggagcttttagcgggaaccagagcaaatgggcttgaggcag-cccagtagtgtgcagggtgtgaaagggaaaaacggccatcagttgaCAGtgtagtactttcctagggcttttgtagcaaaacaccacgaacttgatggcttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagcatcactgggccagaatcaatgtgtcagcactgtcaccctcccttggtggctccataaggaaactggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatgtccctttctcctctgtgtgccctaaaatctcccttctcgtct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187862761 714 + 189454096 acctggatctcaaactct-tcagcctccagaactgtgaggaagacatttctgttgttcacaaaccacccaatctatggtattttgttacagcagccagagtggactaagacaGATTGTTTACCTGGGTAGGAAAATCACCAGGAATAGTGACGGCGAGAAAAACAGCAAGCTAGACACAAGAACCACCCATAATGAAGGGG-------ATGGCAAATG---ACTAGGGAGAGTGACAGAAGGCCCAGTCCCCTGACATGAGCTTTGATGGAACTGACATGAGCTTTGATGGAACTGACATGAGCTTTGATGGAGCTTTTAGCGGGAACCAGGGCAAATGGGCTTGAGGCAG-CCCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACGGCCATCGGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccacgaacttgatggcttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcactgggccaaaatcaatgtgtcagcactgtcaccctcccttggtggctccataaggaaactggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatgtccctttctcctctgtgtgccctaaaatctccctcctcatct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24244091 714 - 25927173 acctggatctcaaactct-tcagcctccagaactgtgaggaagacatttctgttgttcacaaaccacccaatctatggtattttgttacagcagccagaatggactaagacagattgtttacctgggtagaaaaatcaccaggaatagtgacggcgagaaaaacagcaagctagacgcaagaaccacccataatgaagggg-------atggcaaatg---actagggagagtgacagaaggcccagtcccctgacatgagctttgatggaactgacatgagctttgatggaactgacatgagctttgatggagcttttagcgggaaccagagcaaatgggcttgaggcag-cccagtagtgtgcagggtgtgaaagggaaaaacggccatcagttgaCAGtgtagtactttcctagggcttttgtagcaaaacaccacgaacttgatggcttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagcatcactgggccaaaatcaatgtgtcagcactgtcaccctcccttggtggctccataaggaaactggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatgtccctttctcctctgtgtgccctaaaatctccctcctcgtct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3279099 714 + 4669795 acctggatctcaaactct-tcagcctccagaactgtgaggaagacatttctgttgttcacaaaccacccaatctatggtattttgttacagcagccagaatggactaagacaGATTGTTTACCTGGGTAGAAAAATCACCAGGAATAGTGACGGCGAGAAAAACAGCAAGCTAGACACAAGAACCACCCATAATGAAGGGG-------ATGGCAAATG---ACTAGGGAGAGTGACAGAAGGCCCAGTCCCCTGACATGAGCTTTGATGGAACTGACTTGAGCTTTGATGGAACTGACATGAGCTTTGATGGAGCTTTTAGTGGGAACCAGGGCAAATGGGCTTGAGGCAG-CCCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACGGCCATCAGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccatgaacttgatggcttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcactgggccaaaatcaatgtgtcagcactgtcaccctcccttggtggctccataaggaaattggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgagctccctctgctctgtcttcatgtccctttctcctctgtgtgccctaaaatctccctcctcgtct i cerAty1.NW_012001672v1 I 6 C 0 s chlSab2.chr7 134238837 670 + 135778131 acctggatctcacagttt-ccagcctccagaactgtgaggaagacatttctgtttttcacaaacgaccccatctatggtattttgttacagcagccagaatggactaagacaGATAGTTTACCCGGGTAGAAAAATCACCAGGAATAGTGACGGCGAGAAAAACAGCAAGCTAGACACAAGAACCACCCATGATGAAGGGG-------ATGGCAAATG---ACTAGGGAGAGTGACAGAAGGCCCAGTC--------------------------------------------CTGACATGAGCTTTGATGGAGCTTTTAGCGGGAACCAGGGAAAGTGGGCTTGAGGCAG-CCCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACGGCCATCGGTTGACAGTTtagtactttcctagggcttctgtagcaaaacaccatgaacttgatggcttcaatcaacaaacatttattgtctcacaattatggaagccagaagtctgcagtcagtatcactgggccaaaatcaatgtgtctgcattgtcaccctcccttggtggctccataaggaaactggctccttgtgtctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatatccctttctcctctgtgtgccctaaaatctccctcctcatct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666156 694 - 2847728 acctggatctcaaactct-tcagcctccagaactgtgaggaagacatttctgttgctcacaaaccacccaatctatggtattttgttacagcagccagaatggactaagacaGATTGTTTACCTGGGTAGAAAAATCACCAGGAATAGTGACGGCGAGAAAAACAGCAAGCTAGACACAAGAACCACCCATAATGAAGGGG-------ATGGCAAATG---ACTAGGGAGAGTGACAGAAGGCCCAGTCCCCTGACA---------------------CGAGCTTTGATGGAACTGACATGAGCTTTGATGGAGCTTTTAGCGGGAACCAGGGCAAATGGGCTTGAGGCAGCCCCAGTAGTGTGCAGGGTGTGAAAGGGAAAAACGGCCATCAGTTGACAGtgtagtactttcctagggcttctgtagcaaaacaccacgaacttgatggcttcaatcaacaaacatttattctctcacaactatggaagccagaagtctgcagtcagtatcactgggccaaaatcaatgtgtcagcactgtcaccctcccttggtggctccataaggaaactggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatgtccctttctcctctgtgtgccctaaaatctccctcctcgtct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 798860 679 + 2368649 acctggatatcaaactct-ccagcctccagaactgtgaggaagacatttctgttgttcacaaaccacccaatctctggaattttgttacagcagccagaatggactgagataGATTGTTTACCTGGGTAGAAAAATCGCCAGGAATAGCGACGGTGAGAAAAACAGCAAGCCAGACACAAGAACCACCCGTGATGAAGGGGATGGCAAATGGCAAATG---GCTAGGGAGAGTGACAGAAGGCCCAGTCCC------------------------------------------CTGGCATGCGCTTTGATGGAGCTTTCAGCGGGAACCAGGGCAAATGGGCTTGAGGCAG-CCCAGCAGTGTGCAGGGTGTGAAAGGGAAAAACGGCCATTGGTTGACAGtgtaatactttcctagggcttctgtagcaaaacaccacgaacttgatggcttcaatcaacaaacatttattctctcacaattatggaagccagaagtctgcagtcagtatcactgggccaaaatcaatgtgtcagcactatcaccctcccttggtggctccataaggaaactggttccttgtctctcagcatctggtgactgccagcattctttggcttgtggccacatcactccaatctttaaggtcaaca-ttttttgatctccctctgctctgtcttcatatccctttctcctctgtgtaccctaaaatctccctcctcgtct i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 1205709 672 + 14256875 acctggatctcaaactct-ccagcctccagaacggtgaggaatccatttctgctgttcacaaaccacccaatctgtggtattttgttacagcagctagaatggactaagataGATGGTTTACATGGGTAGAAAAATCACCAGGAATAACGATGATAAGAAAAACAGCAAGCCAGATGCAAGAACCACCCATGATGAAGAGG-------GTGGGAAATG---ACTAGGGAGAGTGACAGAAGGCTC------CCGACA---------------------TGAGCTCTGAGGGAAC---------------TGGAGCTTTCAGCAGGACCCAGGGCAAATGGGCTTGAGGCGG-CCCAGCAGTGTGCAGGGTGTGAAAGGGAAAAACAGCCAGCAGGTGACAGtgtagtcctttcctaggacttctgtagcaaaataccacaaactcgatggtttcaattggtaaacatttattttctcacaattatagaagccagaaatctgcaatcagcatcgctgggccacaatcaaggtgtcagcactgtcataccccattggtggctccatggggaaattgcttccttgcctctcagcttccgatgactgccagcattctttggcttgtggccacatcgctccagtccttaaggtcaaca-ttttttagtctccctctgctctgccttcatattccttgcttctaggtgtgcactattctctccctcctcgtct i saiBol1.JH378165 C 0 n 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=8160751.000000 s hg38.chr4_KI270789v1_alt 35109 1524 + 205944 cgtaacagaatatgtgtgatgtgtgattgcattcagggtccatctgaacaatccaggacgatctccccatcttgagaacataatcatatctgcaaaggc-tttcttttcttgccatatgttatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatgttgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggggagagcaggtgggcctcacaagcagatccaatgtgacctaagaaagcaagggaagaagactggcccaagatgttatagtggttaggggtggggctggggtggggtcaaagttcccatgtgtgggaagggctcgtatggtttgactcccccaccagtgccaagggagggggc-tccccatctttcctgttggcttatccagatgcgggcataaaggaataccaaggggtgaggcctagaagctgtcaggagtcaaacatcaagaaatggggccagTctgggcctggtggctcatgcctataatcctagctgggaagctgaggcccagaactttgggaggcccagcacttgaggccaggagtctgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatataaaagttagccaggggtggcggcacatgcctgtag--tctgtaa-tcccagttacttgggaggctgaggcagaagaatcacttgagctcaggaggcagaggttgcagtgagccgagctcacaccactgcactccagcctgggtgacagagtgagacccttcctc------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGGGAGGGAGGCCAGACTACTCATTACATCATATAAGGCAATTTTCCCAGGTTCTAAGGTTCTAGAGATTAGGAACTGGCTATCCTGGGGTGGGTGGTAGAGTCCAGCCTACCACAGGGAG---------TTATGAAACATAAGCATGGTCCTCAAGGGGGAACTGAGATTAGGGTTCGATCAGAAATAGGAGGGGCGTATGAAAGAAGTCAGTGCTATAGATTTTTATGTAGTTACCAATGAGCTGAAACCCATTTCCCCAttttatctgttttgttcattgctgtgttctcagcttctacaacagtacttggaacatagttggcatttgataaatattttctaaataaataaatGAATAAAAATGGACGACATTTCTAATGTAAAGAAGTTATTGGAAAATCACAATGGAAAGTTGGATTTGAAATTTAGGCATCTTCACAAAGTTCATATGCATTATTACTTTAAAATTCTGTAGCGTGGAAGGGAGATGGCAGGGGA-------------GTATGTCACTTTGTGACACAAATGAATGAACCATGCTAATTTCATGGAAAACCCTATCTAAAATTCTGAAACAGAACACCCTGCCTCCCACCTGACATAGCTGCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCATGCAGAACAACCCC-AACCGCCTGCTCTGTTGTGGGTCAACACGCTGCCT s panTro5.chr4 192827257 1520 + 194502333 cgtaacagaatatgtgtgatgtgtgattgcattcagggtccgtctgaacaatccaggacaatctccccatcttgagaacttaatcatatctgcaaaggc-tttcttttcttgccatatgttatggtcacctgcaaagacgtatgggcccctgaggtttgatttgaatgttgaggctgatgatgccacacacaagctaagggggtatgaaaggttcat-actcacatacttcaggcttctggggagagcaggtgggcctcacaagcagatccaatgtgacctaagaaagcaagggaagaagactggcccaagatgttatagtggttaggggtggggctggggtggggtcaaagttcccatgtgtaggaagggctcatatggtttgactcccccaccagtgccaagggagggggc-tccccatcttccctgttggcttatccagatgcgggcataaaggaataccaaggggtgaggcctagaagctgtcaggagtcaaacatcaagaaatggggccagTctgggcctggtggctcatgcctataatcctagctgggaagctgaggcccagaactttgggaggcccagcacttgaggccaggagtctgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatataaaagttagccaggggtggcggcacatgcctgtag--tctgtaa-tcccagttacttgggaggctgaggcagaagaatcacttgagctcaggaggcagaggttgcagtgagccgagctcacaccactgcactccagcctgggtgacagagtgagacccttcctc------aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa---GGGAGGGAGGCCAGACTACTCATTACATCATATAAGGCAATTTTCCCAGGTTCTAAGGTTCTAGGGATTAGGAACTGGCTATCCTGGGGTGGGTGGTAGAGTCCAGCCTACCACAGGGAG---------TTATGAAACATAAGCATGGTCCTCAAGGGGGAACTGAGATTAGGGTTCGATCAGAAATAGGAGGGGCGTATGAAAGAAGTCAGTGCTATAGATTTTTATGTAGTTACCAATGAGCTGAAACCCATTTCCCCAttttatctgttttgttcattgctgtgttctcagcttctacaacagtacttggaacatagttggcatttgataaatattttctaaataaataaatGAATAAAAATGGACGACATTTCTAATGTAAAGAAGTTATTGGAAAATCACAATGGAAAGTTGGATTTGAAATTTAGGCATCTTCACGAAGTTCATATGCACTATTACTTTAAAATTCTGTAGCGTGGAAGGGAGATGGCAGGGGA-------------GTATGTCACTTTGTGACACAAATGAATGAACAATGCTGATTTCATGGAAAACCCCATCTAAAATTCTGAAACAGAACACCCTGCCTCCCACCTGACATAGCTGCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCACACAGAACAACCCC-AACCGCCTGCTCTGTTGTGGGTCAACACGCTGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192711854 1513 + 195804263 cgtaacagaatatgtgtgatgtgtgattgcattcagggtccgtctgaacaatccaggacaatctccccatcttgagaacttaatcatatctgcaaaggc-tttcttttcttgccatatgttatggtcacctgcaaagacgtatgggcccctgaggtttgatttgaatgttgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggggagagcaggtgggcctcacaagcagatccaatgtgacctaagaaagcaagggaagaagactggcccaagatgttatagtggttaggggtggggctggggtggggtcaaagttcccatgtgtaggaagggctcatatggtttgactcccccaccagtgccaagggagggggc-tccccatcttccctgttggcttatccagatgcgggcataaaggaataccaaggggtgaggcctagaagttgtcaggagtcaaacatcaagaaatggggccagTctgggcctggtggctcatgcctataatcctagctgggaagctgaggcccagaactttgggaggcccagcacttgaggccaggagtctgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatataaaagttagccaggggtggcggcacatgcctgtag--tctgtaa-tcccagttacttgggaggctgaggcagaagaatcacttgagctcaggaggcagaggttgcagtgaaccgagctcacaccactgcactccagcctgggtgacagagtgagacccttcct--------------acaaaaaaaaaaaaaaaaaaaaaaaaaa---TGGAGGGAGGCCAGACTACTCATTACATCATATAAGGCAATTTTCCCAGGTTCTAAGGTTCTAGGGATTAGGAACTGGCTATCCTGGGGTGGGTGGTAGAGTCCAGCCTACCACAGGGAG---------TTATGAAACATAAGCATGGTCCTCAAGGGGGAACTGAGATTAGGGTTCGATCAGAAATAGGAGGGGCGTATGAAAGAAGTCAGTGCTATAGATTTTTATGTAGTTACCAATGAGCTGAAACCCATTTCCCCAttttatctgttttgttcattgctgtgttctcagcttctacaacagtacttggaacatagttggcatttgataaatattttctaaataaataaatGAATAAAAATGGACGACATTTCTAATGTAAAGAAGTTATTGGAAAATCACAATGGAAAGTTGGATTTGAAATTTAGGCATCTTCACGAAGTTCATATGCATTATTACTTTAAAATTCTGTAGCGTGGAAGGGAGATGGCAGGGGA-------------GTATGTCACTTTGTGACACAAATGAATGAACAATGCTGATTTCATGGAAAACCCCATCTAAAATTCTGAAACAGAACACCCTGCCTCCCACCTGACATAGCTGCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCACACAGAACAACCCC-AACCGCCTGCTCTGTTGTGGGTCAACACGCTGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3747700 1515 + 4876863 cgtaacagaatatgtgtgatgtgtcattgcattcagggtccgtctgaacaattcaggacaatctccccatcttgagaacttaatcatatctgcaaaggc-tttattttcttgccatatgttatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatgttgaggctgatgatgccacacacaagctaaaggggtatgaaaggttcattactcacatacttcaggcttctggggagagcaggtgggcctcataagcagatccaatgtgacctaagaaagcaagggaagaagactggcccgaggtgttatagtggctaggggtggggctggggtggggtcaaagttcccatgtgtgggaagggctcgtatggtttgactctcccaacagtgccaagggagggggc-tccccatctttcctgttggcttatccagatgcgagcataaaggaataccaaggggtgaggcctagaagctgtcaggagtcaaacatcaagaaatggggccagTctgggcctggtggctcatgcctataatcctagctgggaagctgaggcccagaactttgggaggcccagcacttgaggccaggagtctgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatataaaagttagccaggggtggcggcacatgcctgtag--tctgtaa-tcccagttacttgggaggctgaggcagaagaatcacttgagctcaggaggcagaggttgcagtgagccgagctcacaccactgcactccagcctgggtgac--agtgagacccttcctc------aaaa---aaaaaaaaaaaaaaaaaaaaaaaaaaaa---GGGAGGGAGGCCAGACTACTCATTACATCATATAAGGCAATTTTCCCAGGTTCTAAGGTTCTAGGGATTAGGAACCGGCTATCCTGGGGTGGGTGGTAGAGTCCAGCCTACCACAGGGAG---------TTATGAAACATAAGCATGGTCCTCAAGGGGGAACTGAGATTAGGGTTCAATCAGAAATAGGAGGGGCGTATGAAAGAAGTCAGTGCTATAGATTTTTATGTAGTTATCAATAAGCTGAAACCCATTTCCCCAttttatctgttttgttcattgctgtgttctcagcttctacaacagtacttggaacatagttggcatttgataaatattttctaaataaataaatGAATAAAAATGGATGACATTTCTAATGTAAAGAAGTTATTGGAAAATCACAATGGAAAGTTGGATTTGAAATTTAGGCACCTTCACAAAGTTCATATGCATTATTACTTTAAAATTCTGTAGCGTGGAA-GGAGATGGCAGGGGA-------------GTATGTCACTTTGTGACACAAATGAATGAACAATGCTGATTTCATGGAAAACCCTATCTAAAATTCTGAAACAGAACACCCTGCCTCACACCTGACATAGCTGCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCACGCAGAACAACCCC-AACCGCCTGCTCTGTTGTGGGTCAACACGCTGCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112633383 1504 + 115148730 ggtaacagaatacgtgtgatgtgcgattgcattcagggtccatctgaacaatccaggacagtctccccatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatgctatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatgttgaggctgatgatgccgcacacaagctaagggggtatgaagggttcattactcacatacttcaggcttctggggagaggaggtgggcctcacaagcagatccaatgtgacctaagaaagcagaggaagaagactggcctgagatgttatagtggttaggggtggggctggggtggggtcaaagttcccatgtgtgagaggggcttgtatggtttgactctcccaccagtgccaagggagggggc-tccccacttttcctgttggcttatccagatatgggcataaagggataccaaggggtgaggcctagaagctgtcaggagtcaaacatcaagaaatggggccagTctggacctggtggctcatgcctgtaatcctagctgggaagct-aattccagaactttgggaggcccagcacttgaggccaggagtccgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatacaaaagttagccaggggtggtggcacacgcctgtag----------tcccagttacttgggaggctgaggcaggagaatcacttgggcccaggaggcagaggttgcagtgagccgagctcacaccactgcactccagcctgggtgacagagtgagaccctgcctc---------------aaaaaaaaaaaaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGACTACTCATTACACCATATAAGGCAACTTCCCCAGGTTCTAGGGTTCTAGGGATTAGGAACTGGCTATCCTGGGGTGGGTGGTAGAGTCCAGCCTACCACAGGGAG---------TTATGAAACATAAGCATGGTCCTCAAGGGGGAACTGAGATTAGGGTTCAATCAGAAATAGGAGGGGCATATGAAAGAAGTCAGTGCTATAGATTTTTGTGTAGTTATCAATGAGCTGAAACCCATTTCCCAAttttatctgttttgttcattgctgtggtctcagcttctacgacagtatttggaacatagttggcgtttgataaatattttctaaataaataagtGAATAAAAATGGATGGCATTTCCAATGTAAAGAAGTTATTGGAAAATCACGATGGAAAGTTGGATTTGAAATTTAGGCATCTTCACAAAGTTCATATGCATTATTACTTTAAAATTCTGTAGTGTGGAAGGGAGATGGCAGGGGA-------------GCATATCACTTTGTGACACAAATGAATGAACAATGCTGATTTCATGGAAAACCCCATCTAAAATTCTGAAACAGAACACCCTGCCTCCCACCTGACATAGCCGCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCACACAGAACAACCCC-AACCGCCTGCTCTGTTGTGGGTCAATACACTGCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188916025 1484 + 190429646 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccgcatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatattatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatattgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggagacagcaggttggcctcataagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaggtgttataatggttaggggtggggctggggtggggtcagagttcccatgtgtgggaagggcttgtacggtttgactctcccaccagtgcaaagggaggggac-tccctgcctttcctgttggcttatccagatgcgggcataaagggattccaaggggtgaggtctagaagctgtcagtagtcaaacatcaagaaatggggccagcctGGTCCTggtggctcatgcctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccaccctgaccaacatggtgaaaccctgtctctaccaaaatacacacattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcacttgagcccaggaggcagaggctgcagtgagccgagctcacaccgctgcactccagcctgggtgacagagtgagaccctgcctc-------------------------aaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGTCTACTCATCACACCGTGTAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTTGGGGGTAGGGTCCAGCCTACCACAGGGAG---------TTATGAAACATCAGCAGGGTCCTCAAGGGGGAACTGAGGTTAGGGTTCGATGAGAAACAGAAGGGACGTATGAAAGAAATCAGCGCTATAGATTTTTATGTAGTCATCGATGAGCTGAAACCCATTTCCCTAttttatctgttttgttcattgcagtgttctcagctgctacaacagtacttggaacatagtcggcgtttgac--attgtttctaaataaataaatgaatAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCCTCCCAAAGTTGATATGCATTATTCCTTCAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCATATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTCATGG-AAACCCCACCTAAAATTCTGAAACGGAACATCCCGCCTCCCATCTGACTTTGCTTTATCTGTTAGCGTTTTCCAGCCCTGTGTC-----------TCACCCC-GACCGCCTGCTCTGTTGTGGGTCAGTAAACCACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187863475 1483 + 189454096 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccccatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatattatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatattgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggagacagcaggttggcctcataagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaggtgttataatggttaggggtggggctggggtggggtcagagttcccatgtgtgggaagggcttgtacggtttgactctcccaccagtgcaaagggaggggac-tccctgcctttcctgttggcttatccagatgcgggcataaagggattccaaggggtgaggtctagaagctg-cagtagtcaaacatcaagaaatggggccagcctGGTCCTggtggctcatgcctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatacacaaattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcgcttgagcccaggaggcagaggttgcggtgagccgagctcacaccgctgcactccagcctgggtgacagagtgagaccctgcctc-------------------------aaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGTCTACTCATCACACCGTGTAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTGGGGGGTAGGGTCCAGCCTACCACAGGGAG---------TTATGAAACATCAGCAGGGTCCTCAAGGGGGAACTGAGGTTGGGGTTCGATCAGAAACAGAAGGGACGTATGAAAGAAATCAGCGCTATAGATTTTTATGTAGTCATCGATGAGCTGAAACCCATTTCCCTAttttatctgttttgttcattgcagtgttctcagctgctacaacagtacttggaacatagtcggcgtttgac--attgtttctaaataaataaatgaatAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCCTCCCAAAGTTGATATGCATTATTCCTTTAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCATATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTCATGG-AAACCCCACCTAAAATTCTGAAACGGAACATCCCGCCTCCCATCTGACTTTGCTTTATCTGTTAGCGTTTTCCAGCCCTGGGTC-----------TCACCCC-GACCGCCTGCTCTGTTGTGGGTCAGTAAACCACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24244805 1495 - 25927173 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccgcatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatattatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatattgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggagacagcaggttggcctcataagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaggtgttataatggttaggggtggggctggggtggggtcagagttcccatgtgtgggaagggcttgtacgttttgactctcccaccagtgcaaagggaggggac-tccctgcctttcctgttggcttatccagatgcgggcataaaggggttccaaggggtgaggtctagaagctgtcagtagtcaaacatcaagaaatggggccagcctGGTCCTggtggctcatgcctataatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccaccctggccaacatggtgaaaccctgtctctaccaaaatacacacattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcacttgagctcaggaggcagaggctgcagtgagccgatctcacaccgccgcactccagcctgggtgacagagtgagaccttgcctc--------------aaaaaaaaaaaaaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGTCTACTCATCACACCGTGTAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTGGGGGGTAGGGTCCAGCCTACCACAGGGAG---------TTATGAAACATCAGCAGGGTCCTCAAGGGGGAACTGAGGTTAGGGTTCGATCAGAAACAGAAGGGACGTATGAAAGAAATCAGCGCTATAGATTTTTATGTAGTCATCGATGAGCTGAAACCCATTTCCCTAttttatctgttttgttcattgcagtgttctcagctgctacaacagtacttggaacatagtcggcgtttgac--attgtttctaaataaataaatgaatAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCCTCACAAAGTTGATATGCATTATTCCTTTAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCATATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTCATGG-AAACCCCACCTAAAATTCTGAAACGGAACATCCCGCCTCCCATCTGACTTTGCTTTATCTGTTAGCGTTTTCCAGCCCTGTGTC-----------TCACCCC-GACCGCCTGCTCTGTTGTGGGTCAGTAAACCACCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3279813 1528 + 4669795 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccccatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatattatggtcacctgcaaagacatatgggcccctgaggtttgatttgaatattgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggggacagcaggttggcctcataagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaggtgttataatggttaggggtggggctggggtggggtcagagttcccatgtgtgggaagggcttgtacggtttgactctcctaccagtgcaaagggaggggac-tccccgcccttcctgttggcttatccagatgcgggcataaagggattccaaggggtgaggtctagaagctgtcagtagtcaaacatcaagaaatggggctagcctGGTCCTggtggctcatgcctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccagcctggccaacttggtgaaaccctgtctctaccaaaatacacaaattagccaggggtggtggcacatgcctgcagtgtctgtaaatcgcagctacttgggaggctgaggcaggagaatcgcttgaaccagggagtagaaggttgcagtgagccgagatcccgccactgcactccagcct-ggcgacagagcaagactccatctcaaaaaaaaaaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGACTACTCATTATACCATATAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTGGGGGGTAGAGTCCAGCCTACCACAGGGAG---------TTGTGAAACATCAGCAGGGTCCTCAAGGGGGAACTGAGGTTAGGGTTCGATCAGAAACAGAAGGGACGTATGAAAGAAATCAGCGCTATAGATTTGTATGTAGTCATCGATGAGCTGAAACCCATTTCCCTAttttatctgttttgttcattgcagtgttctcagctgctacaacagtacttggaacatagtcggcgtttgac--gttttttctaaataaataaatGAATAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCCTCACAAAGTTGATATGCATTATTCCTTTAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCATATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTCATGG-AAACCCCACCTAAAATTCTGAAACGGAACATCCCGCCTCCCATCTGACATTGCTTTATCTGTGAGCGTTTTCCAGCCCTGTGTCTCCACACAC-ATCACCCC-GGCCGCCTGCTCTGTTGTGGGTCAGTAAACCACCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134239507 1527 + 135778131 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccccatcttgagaacttaatcacatctgcaaaggcttttgttttcttgccatatattgtggtcacctgcaaagacatatgggcccctgaggtttgatttgaatattgaggctgctgatgccacgcacaagctaaggaggtatgaaaggttcattactcacatagttcaggcttctggggacagcaggttggcctcacaagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaggtgttataatggttaggggtggggctgggatggggtcagagttcccatgtatgggaagggcttgtacggtttgactctcccaccagtgcagagggaggggac-tccccgcctttcctgttggcttatccagatgcgggcataaagggattccaaggggtgaggtctagaagctgtcagtagtcaaacatcaagaaatggggccagcctGGTCCTCgtggctcatgcctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtctgagaccagcctggccaacatagtgaaaccctgtctctaccaaaatacacaaattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcacttgagctcaggaggcagaggttgcagtgagctgagctcacaccgctgcactccagcctgggtgacagagtgagaccctgcctc-aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa---aGGAGGGAGGCCAGACTACTCATCATACCATGTAAGGAAATTTCTCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTGGGGGGTAGAGTCCAGCCTACCACAGGGAGTTATGAAACTTATGAAACATAGGCAGGGTCCTCAAGGGGGAACTGAGGTTAGGGTTCGATCAGAAACAGGAGGGACGTATGAAAGGAATCAATGCTATAGATTTTTATGTAGTCATCAATGAGCTGAAACCCATTTCCCTAttgtatctgttttgttcattgctgtgttctcagctgctacaacagtacttggaacatagtcggcgtttgac--attttttctaaataaataaatGAATAAAAATGGATGGCATTTCTAATGTAAAGAAGTTGTTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGTATCTTCACCAAGTTGATATGCATTGTTCCTTTAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCGTATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTAATGG-AAACCCCACCTAAATTTCTGAAACGGAACATCCTGCCTCCCATCTGACATTGCTCCTTCTGTTAGCATTTTCCAGCCCTGTG--GTCACACAG-ATCACCCCTGACTGCCTGCTCTGTTGTGGGTCAATAAACCACCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2666850 1487 - 2847728 cgtaacagaatatgtgtg-------attgcatttagggtccatgtgaacaatccaggacaatttccccatcttgagaacttaatcacatctgcaaaggc-tttgttttcttgccatatattatggtcacctgcaaagacatatgggcccctgaggtttgatttgagtattgaggctgatgatgccacacacaagctaagggggtatgaaaggttcattactcacatacttcaggcttctggggacagcaggttggcctcataagcagatccaatgtgacctaagaaagcaagg---gaagactggcccgaagtgtgataatggttaggggtggggctggggtggggtcagagttcccatgtttcggaagggcttgtacggtttgactctcccaccagtgcaaagggaggggacttccccgcctttcctgttggcttatccagatgcgggcataaagggattccaaggggtgaggtctagaagctgtcagtagtcaaacatcaagaaatggggccagcctGGTCCTggtggctcatgcctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatacacagattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcacttgagcgcaggaggcagaggttgcagtgagccgagctcacaccgctgcactccagcctgggtgacagagtgagaccctgcctc---------------------------------aaaaaaaa---aGGAGGGAGGCCAGACTACTCATTACACCATATAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTATCGTGGGGTGGGGGGTAGAGTCCAGCCTACCACAGGGAG---------TTGTGAAACATCAGCAGGGTCCTCAAGGGGGAACTGAGGTTAGGGTTCGATCAGAAACAGAAGGGGCGTATGAAAGAAATCAGCGCTATAGATTTTTATGTAGTCATCGATGAGCTGAAACCCATTTCCCTAttttatctgttttgttcattgcagtgttctcagctgctacaacagtacttggaacatagtcggtgtttgac--gttttttctaaataaataaatGAATAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCCTCACAAAGTTGATATGCATTATTCCTTTAACATTCTGTAGCGTGGAAGGGAGATGGCAGGGGAAACTTCGGAGCTGGCATATCACTTTGTGACCCAAATGAATGAACAATGCTGAATTCATGG-AAACCCCACCTAAAATTCTGAAACGGAACATCCCGCCTCCCATCTGACATTGCTTTATCTGTGAGCGTTTTCCAGCCCTGTGTCTCCACACAC-ATCACCCC-GGCCGCCTGCTCTGTTGTGGGTCAGTAAACCACCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 799539 1495 + 2368649 cgtaacagaatatgtgtg-------attgcatttagggtccatctggacaatccaggacagtttccccatcttgagaacttaatcacatctgcctaggc-tttgttttcttgccatatactacggtcacctgcaaagac--atgggcccctgaggtttgatttgaatgttgaggctgatgatgccgcacacaagctaagagggtatgaaaggttcattactcacatacttcaggcttctgcggacagcaggttggcctcacaagcagatccaatgtgacctaagaaagcaagg---gaagactggcccaaggtgttataatggttaggggtggggctggggtgggatcagagttcccatgtatgggaagggcttgtatggtttgactctcccaccagagcaacgggaggggac-tccccgcctttcctgttggcttatccagatgcgggcataaagggattccaaggagtgaggtctagaagctgtcagtagccaaacatcaagaaatgcggccagcctGGTCCTggcggctcatacctgtaatcctagctgggaagctgaggcccagaactttgtggggcccagcacttgaggccaggagtccgagaccagcctggccaacatggtgaaaccctgtctctaccaaaatacaccaattagccaggggtggtggcacatgcctgcag----------tcccagttacttgggaggctgaggcaggagaatcacttgagcccaggaggcagaggttgcagtgagccgagctcgcactgctgcaccccagcctgggtgacagagtgagaccctgcctc-----------------------aaaaagaaaaaaaaaaaa---aaaaGGGAGACCAGGCTATTCATTACACCATATAAGGAAATTTCCCCAGGTTCTAGGGCTCTAGGGATTAGGAACTGGCTCTCAT-GGGTGGGTGGTAGAGTCCAGCCTGTCACAGGGAG---------TTACGAAACACAAGAATGGTCCTCAAGGGGGAACTGAGATTGGGG-TCGACCAGAAACAGGAGGGACGTAGGAAAGAAATCAGTGCTGTAGATTGTTATGTAGTCACCGGTGAGCTGAAACCCATTTCCCTGCTGtgtctgttttgttccttgctgtgttctcagctgctacaacagtacttggaacatcgtcggcgtttgacaaattttttctaaatacataaatGAATAAAAATGGATGGCATTTCTAATGTAAAGAAGTTATTGGAAAATCACAGTGGAAAGTTGGATTTGAAATTTAGGCATCTTCACAAAGTTGATACGCGTTGTTCCTTTAACATTCTGTAGCGTGGAAGGGAGGTGGCAGGGGAAACTTTGGAGCTGGCGTATCACTTTGTGACCCAAATGAATGAACAATACTGAATTCGTGG-AAACCCCACCTAAAATTCTGAAACAGAATATCCTGCCTCCCATCTGACATTGCTCCTTCTGTTAGCGTTTTCCAGCCCTGTGTCTCCACACAG-ATCACCCCTGACCGCCTGCTCTGTTGTGGGTCAATAAACCACCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876427 21 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=1567663.000000 s hg38.chr4_KI270789v1_alt 36633 291 + 205944 TTCCAAGCACTCTGAATACACCACAGACGTGTCCTACCCACAAACGTCTTCCTGGTGGCGCCCCTTCAAATCTAGGATCTACAATATGGAAAGAAAATTTTATTTAAGTA-GCTGTTCATAAGACACTAACTGAAAGATGTGCGCGCGTG----ca----------cacac-----------acacacacac-----------------acacGATGTACAGTGTCACAGAGGCTCTAGCTAT-GGTTATTGGACTTCCGAAGGATGCAGAAGGAGAAAGAGAGTGATAATTAACCATTACGTTAGAGCAAAACCCAAGATGGTTCCTGCACGTT s panTro5.chr4 192828777 287 + 194502333 TTCCAAGCACTCTGAATACACCACAGACGTGTCCTACTCACAAACGTCTTCCTGGTGGCGCCCCTTCAAATCTAGGATCTACAATATAGAAAGAAAATTTTATTTAAGTA-GCTGTTCATAAGACACTAACTGAAAGATGTGCATGCGCG----ca----------cacac-----------acacacacac-----------------acacGATGTACAGTGTCACAGAGGCTCTAGCTAT-GGTTATTGGACTTCCGAAGGATGCAGAAGGAGA----GAGTGATAATTAACCATTACGTTAGAGCAAAACCCAAGATGGTTCCTGCACGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713367 291 + 195804263 TTCCAAGCACTCTGAATACACCACAGACGTGTCCTACTCACAAACGTCTTCCTGGTGGTGCCCCTTCAAATCTAGGATCTACAATATAGAAAGAAAATTTTATTTAAGTA-GCTGTTCATAAGACACTAACTGAAAGATGTGCATGCGCGCGcaca----------cacac-----------acacacacac-----------------acacGATGTACAGTGTCACAGAGGCTCTAGCTAT-GGTTATTGGACTTCCGAAGGATGCAGAAGGAGA----GAGTGATAATTAACCATTACGTTAGAGCAAAACCCAAGATGGTTCCTGCACGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749215 289 + 4876863 TTCCAAGCACTCTGAATACACCACAGACGTGTCCTACCCACAAACATCTTCCTGGTGGCGCCCCTTCAAATCTAGGATCTACAATATGGAAAGAAAATTTTATTTAAGTA-GCTGTTCATAAGACACTAACTGAAAGATGTGcacgca------ca----------cacac-----------acacacacac-----------------acacGATGTACAGTGTCACAGAGGCTCTAGCTAT-GGTTATTGGACTTCCGAAGGATGCAGAAGGAGAAAGACAGTGATAATTAACCATTATGTTAGAGCAAAACCCAAGATGGTTCCTGCACGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112634887 295 + 115148730 TTCCAACCACTCTGAATACGCCATAGATGTGTCCTACCAATAAACGTCTTCCTGGTGGTGCCCCTTCAAATTTAGGATCTACAATATGGAAAGAAAATTTTATTTAAGAA-ACTGTTCATAAGACACTAACTGAAAGATGTGCGCGCGcacacaca----------cacac-----------acacacacac-----------------acacGACGTACAGTGTCACAGTGGCTCTAGCTAT-GGATAGTGGACTTCCGAAGGATGCAGAAGGAGAAACAGAGCGATAATTAATCATTACATTAGAGCAAAACCCAAGATGGTTCCTGCGCATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188917509 288 + 190429646 TTCCAACCACTCTGAATATGCCATAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCACATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTAACTGAAAGATGTGCGTGCATGTGTGCG-----------------------------CACACAC-----------------ACACGACGTACAGTGTCACAGAGGCTCTAGCTATGGGATATTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAGTGATAATTAGTCATTACATTAGAGCAAAACTCAAGATGGTTCCTGCACATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187864958 292 + 189454096 TTCCAACCACTCTGAATATGCCATAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCACATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTAACTGAAAGATGTGCGTGCATGCGTGCG--------------C-----------ACACACACAC-----------------ACACGACGTACAGTGTCACAGAGGCTCTAGCTATGGGATATTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAGTGATAATTAGTCATTACATTAGAGCAAAACTCAAGATGGTTCCTGCACATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24246300 292 - 25927173 TTCCAACCACTCTGAATATGCCATAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCACATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTAACTGAAAGATGTGTGTGCACGTGTGCG--------------C-----------GCACACACAC-----------------ACACGACGTACAGTGTCACAGAGGCTCTAGCTATGGGATATTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAGTGATAATTAGTCATTACATTAGAGCAAAACTCAAGATGGTTCCTGCACATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3281341 306 + 4669795 TTCCAACCACTCTGAATATGCCACAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCACATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTAACCGAAAGATGTGCGTGCACGTGTGCGTGcacacacacacac-----------acacacacac-----------------acacGACGTACAGTGTCACGGAGGCTCTAGCTATGGGATATTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAGTGATAATTAGTCATTACATTAGAGCAAAACTCAAGATGGTTCCTGCACATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241034 288 + 135778131 TTCCAACCACTCTGAACATGCCATAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCTTTTCAAATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTGACTGAAAGATGTACGTGCATGTG----------------CAT-----------ACACACACAC-----------------ACACGACGTACAGTGTCACAGAGGCTGTAGCTATGGGATATTGGACTTCCGA--CATGCGGAAGGAGAAGGAGAGTGATAATTAGTCATTACATTAGAGCAAAACCCAAGATGGTTCCTGCACATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2668337 300 - 2847728 TTCCAACCACTCTGAATATGCCACAGATGTGTCCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCACATTCAGGATCTACAATATGGATAGAAAATTTTATTTAAGCA-GCTGTTCATAAGACACTAACTGAAAGATGTGCGTGCACGTGTGCG------cacacacac-----------acacacacac-----------------acacGACGTACAGTGTCACGGAGGCTCTAGCTATGGGATATTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAGTGATAATTAGTCATTACATTAGAGCAAAACTCAAGATGGTTCCTGCACATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801034 286 + 2368649 TTCCAACCACTCTGAATATGCCATAGATGTGACCTACCAACAAACGTCTTCCTGGTGGTGCCCTTTCAAATTTAGGATCTACAATATGGATAGAAAATTTTATTTAAGTA-GCTGCTCATAAGACACTAACTGAAAGGTGTGCATGCACGTACACG-------------------------------TGCAC-----------------ACACGATGTAGAGTGTCACAGAGGCTCTAGCTGTGGGATTTTGGACTTCCGAAGCATGCGGAAGGAGAAAGAGAATGATAATTAGTGATTACATTAGAGCAAAACCCAAGATGGTTCCTGCACATT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16876448 286 - 59632846 TCCCAACCACTCTGGACACTTAATAGATATGCCCTA---AAAAAAATCCCCTAGG------------------------TATAGTGTGAAAAGAAAAACTTACTTAAAAAGGCAGTTAATAAGATATTAACTAAAAGACACACCT-CACATTTACC----------CACACCCCACATGCTGATACACACACAGAGCAAGGAGAGAGGGACAGGAGATGTAGTAACATAGAGGTCCTGGCT--------TCCTACTTGGAAGGTA---AGAAGGAGAGAAAGAAAGTTGATTAATCATAAAAATAAAGCAAAACCAAAGATGTGTCTTCTACATT i canFam3.chr16 I 21 I 11 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=101391.000000 s hg38.chr4_KI270789v1_alt 36924 24 + 205944 GATTTTCTACAGTGATTAAC-tttt s panTro5.chr4 192829064 24 + 194502333 GATTTTCTACAGTGATTAAC-tttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713658 23 + 195804263 GATTTTCTACAGTGATTAAC--ttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749504 24 + 4876863 GATTTTCTACAGTGATTAAC-tttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635182 24 + 115148730 GATTTTCTACAGTGAATAAC-tttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188917797 24 + 190429646 GTTTTTCTATAGTGAATAAC-tttt i rheMac8.chr5 C 0 I 2 s macFas5.chr5 187865250 24 + 189454096 GTTTTTCTATAGTGAATAAC-tttt i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24246592 24 - 25927173 GTTTTTCTATAGTGAATAAC-tttt i macNem1.NW_012013133v1 C 0 I 2 s cerAty1.NW_012001672v1 3281647 25 + 4669795 GTTTTTCTATAGTGAATAACttttt i cerAty1.NW_012001672v1 C 0 I 2 s chlSab2.chr7 134241322 24 + 135778131 GGTTTTCTATAGTGaataat-aaat i chlSab2.chr7 C 0 I 35 s manLeu1.NW_012102221v1 2668637 24 - 2847728 GTTTTTCTATAGTGAATAAC-tttt i manLeu1.NW_012102221v1 C 0 I 2 s colAng1.NW_012116221v1 801320 23 + 2368649 GTTTTTCTAT-GTGAATATC-tttt i colAng1.NW_012116221v1 C 0 I 4 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876734 11 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=87665.000000 s hg38.chr4_KI270789v1_alt 36948 23 + 205944 tttttcttttgtttttgagacgg s panTro5.chr4 192829088 23 + 194502333 tttttcttttgtttttgagacgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713681 23 + 195804263 tttttcttttgtttttgagacgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749528 23 + 4876863 tttttcttttgtttttgagacag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635206 23 + 115148730 tttttcttttgtttttgagacgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188917823 23 + 190429646 ttttaatttgttttttgagacgg i rheMac8.chr5 I 2 C 0 s macFas5.chr5 187865276 23 + 189454096 ttttaatttgttttttgagacgg i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24246618 23 - 25927173 tttaaatttgttttttgagacgg i macNem1.NW_012013133v1 I 2 C 0 s cerAty1.NW_012001672v1 3281674 23 + 4669795 ttttaatttgttttttgagacgg i cerAty1.NW_012001672v1 I 2 C 0 s manLeu1.NW_012102221v1 2668663 23 - 2847728 ttttaatttgttttttgagacgg i manLeu1.NW_012102221v1 I 2 C 0 s colAng1.NW_012116221v1 801347 23 + 2368649 tcttttttttttttttgagacgg i colAng1.NW_012116221v1 I 4 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876734 11 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e chlSab2.chr7 134241346 35 + 135778131 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=1495972.000000 s hg38.chr4_KI270789v1_alt 36971 272 + 205944 agtctcgctttgtgtcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcccaggttcaagcaattctactgcctcagcctccctagaagctgggatcccaggtgcctgccaccacacctggctaagttttgtatttctagtagagaaggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatc------ctttggcctcccaaagtgctgggattacaggcgtgagccactatgccca-gccCCT s panTro5.chr4 192829111 272 + 194502333 agtctcgctttgtgtcccacgctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcccaggttcaagcaattctactgcctcagcctccctagaagctgggatcccaggtgcctgccaccacacccggctaagttttgtatttctagtagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatc------cttcggcctcccaaagtgctgggattacaggtgtgagccactgtgccca-gccCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713704 272 + 195804263 agtctcgctttgtgtcccacgctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcccaggttcaagcaattctactgcctcagcctccctagaagctgggatcccaggtgcctgccaccacacccggctaagttttgtatttctagtagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatc------cttcggcctcccaaagtgctgggattacaggtgtgagccactgtgccca-gccCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749551 272 + 4876863 agtcttgctttgtgtcccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcccaggttcaagcaattctactgcctcagcctccgtagaaactgggatcccaggtgcccgccaccacacccggctaagttttgtatttctagtagagacggggtttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatc------ctttggcctcccaaagtgctgggattacaggcgtgagccactgtgccca-gccCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635229 272 + 115148730 agtctcgctatgtgtcccaggctggagtgcagtggcatgatcatggctcactgcaacctctgcctgccaggttcaagcaattctcctgcctcagcctccctagaagctgggattccaggcatccgccaccacacctggctaatttttgtatttctagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcagttgatc------cttcggcctcccaaagtgctgggattacaggtgtgagccaccatgccca-gccCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188917846 279 + 190429646 aatctcgctttgtcgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctccctagaagctgggattccaggcacccgccaccatgccttgctaatttttgcatttttagtaaagatggggttttaccatgttggccaggcttgtcttgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtggtgggattacaggcgtgagccactgcacccaggccCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865299 279 + 189454096 aatctcgctttgtcgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctccctagaagctgggattccaggcacccgccaccatgccttgctaatttttgcatttttagtaaagatggggttttaccatgttggccaggcttgtcttgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtagtgggattacaggcgtgagccactgcacccaggccCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24246641 279 - 25927173 aatctcgctttgtcgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctacctcagcctccctagaagctgggattccaggcacccgccaccatgccttgctaatttttgcatttttagtaaagatggggttttaccatgttggccaggcttgtcttgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtggtgggattacaggcatgagccactgcacccaggccCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3281697 279 + 4669795 aatctcgctttgtcgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctccctagaagctgggattccaggcacccgccaccatgcctggctaatttttgcatttttagtaaagatggggttttaccatgttggccaggcttgtcttgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtggtgggattacaggcgtgagccactgcacccaggccCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241381 279 + 135778131 aatctcactttgtcgcccaggctggagtgcagtggcgcgatcttggctcactgcaacctctgcctcccaggttcaagcaattttcctgcctcagcctccctagaagctgggattccaggcccccgccaccgtgcctggctaatttgtgcattgttagtaaagatggggtttcaccatgttggccaggcttgtcttgaacttgtgacctgaggtgatcctcctgcttcagcctcccaaagtgctgggattacaggcgtgagccactgcacccaggccCCG i chlSab2.chr7 I 35 C 0 s manLeu1.NW_012102221v1 2668686 279 - 2847728 aatctcgctttgtcgcccaggctggagtgcagtggcctgatcttggcttactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctccctagaagctgggattccaggcacccgccaccatgcctggctaatttttgcatttttagtaaagatggggttttaccatgttggccaggcttgtcttgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtggtgggattacaggcgtgagccactgcacccaggccCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801370 279 + 2368649 aatctcgctttgtcgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctccctagaagctggaattccaggcaccaacccccatgcctggctaatttttgcatttttagtaaagatggggtttcaccatgttggccaggcttgtctcgaactcctgacctcaggtgatcctcctgcttcagcctcccaaagtgctgggattacaggcatgagccactgcgcccaggccCCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e canFam3.chr16 16876734 11 - 59632846 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=95021.000000 s hg38.chr4_KI270789v1_alt 37243 17 + 205944 CTACTGCATAACTTAAT s panTro5.chr4 192829383 17 + 194502333 CTACTGCATAACTTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713976 17 + 195804263 CTACTGCATAACTTAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749823 17 + 4876863 CTACTGCATAACTTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635501 17 + 115148730 CTACTGCATAAATTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918125 17 + 190429646 ATACTGCGTAACTTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865578 17 + 189454096 ATACTGCGTAACTTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24246920 17 - 25927173 ATACTGCGTAACTTAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3281976 17 + 4669795 ATACTGCGTAACTTAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241660 17 + 135778131 ATACTGCGTAACTTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2668965 17 - 2847728 ATACTGCGTAACTTAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801649 17 + 2368649 GTACTGCGTAACTTAAT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16876745 17 - 59632846 CTCTTACAGAGATTAAT i canFam3.chr16 I 11 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e dasNov3.JH570353 1365480 2996 - 2520184 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=219596.000000 s hg38.chr4_KI270789v1_alt 37260 39 + 205944 TACCACAAAATA-ATGCACTAG-ATCTTCATATTTCCTCCC s panTro5.chr4 192829400 39 + 194502333 TACCACAAAATA-ATGCACTAG-ATCTTCATATTTCCTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192713993 39 + 195804263 TACCACAAAATA-ATGCACTAG-ATCTTCATATTTCCTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749840 39 + 4876863 TACCACAAAATA-ATGCACTAG-ATCTTCATATTTCCTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635518 33 + 115148730 TACCACAAAATA-ATGC-------TCTTCATATTTCCTCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918142 38 + 190429646 TACCACAAAAC--ATGCACTAG-CTCTTCCTATTTCCTCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865595 38 + 189454096 TACCACAAAAC--ATGCACTAG-CTCTTCCTATTTCCTCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24246937 38 - 25927173 TACCACAAAAC--ATGCACTAG-CTCTTCCTATTTCCTCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3281993 38 + 4669795 TACCACAAAAC--ATGCACTAG-CTCTTCCTATTTCCTCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241677 38 + 135778131 TACCACAAAAC--ATGCACTAG-CTCTTCATATTTCCTCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2668982 38 - 2847728 TACCACAAAAC--ATGCACTAG-CTCTTCCTATTTCCTCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801666 38 + 2368649 TACCACAAAAC--ATGCACTAG-CTCTTCATATTTCCTCCC i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16876762 40 - 59632846 TACTACAAAATACATCCCCAGT-CTCTTCACATTTTCTTCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1368476 40 - 2520184 TACCACAGGACA-CGGCCCCAGTCTCTTCACATTTTCTTCC i dasNov3.JH570353 I 2996 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11186842 0 - 11315646 C a score=880315.000000 s hg38.chr4_KI270789v1_alt 37299 129 + 205944 ACGGGGCACTCATTCACCAAGGGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGTTTAATATAAATTGTCATTAGCCAATATTCTTAGCCAGTCCCAC s panTro5.chr4 192829439 129 + 194502333 ACGGGGCACTCATTCACCAAGGGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGTTTAATATAAATTGTCATTAGCCAATATTCTTAGCCAGTCCTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714032 129 + 195804263 ACGGGGCACTCATTCACCAAGGGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGTTTAATATAAATTGTCATTAGCCAATATTCTTAGCCAGTCCTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3749879 129 + 4876863 ACGGGGCACTCATTCACCAAGGGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGATTGAGAGTTTAATATAAATTGTCATTAGCCAATATTCTTAGCCAGTCCTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635551 130 + 115148730 ACTGGGCACTCATTAACCAAAGGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTTAAA--AAAATATTCAGGGAATGAGAGCTTAATATAAATTATCATTAGCCAATATTCTTAGCCAGTCCTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918180 129 + 190429646 ACTGCACGCTTAATTACCAAGGGACTCACTT-CCAAGGTCCTTCGCCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865633 129 + 189454096 ACTGCACGCTTAATTACCAAGGGACTCACTT-CCAAGGTCCTTCGCCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24246975 129 - 25927173 ACTGCACGCTTAATTACCAAGGGACTCACTT-CCAAGGTCCTTTGCCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282031 129 + 4669795 ACTGCACACTCAATTACCAAGGGACTCACTT-CCAAGGTCTTTCGCCCTATTTCTTTTCTTTT-GA--AAAATACTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241715 129 + 135778131 ACTGCGCGCTCAATTACCAAGTGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669020 129 - 2847728 ACTGCACACTCAATTACCAAGGGACTCACTT-CCAAGGTCTTTCGCCCTATTTCTTTTCTTTT-GA--AAAATACTCAGGGAATGAGAGCTGAGTATAAATTGTCATTAGCCCATATTCTTAGCCAGTCCTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801704 129 + 2368649 ACTGCGCACTCAATTACCAAGTGACTCATTT-CCAAGGTCTTTCACCCTATTTCTTTTCTTTT-GA--AAAATATTCAGGGAATGAGAGCTGAGTATAAATTGTCGTTAGCCCATATTCTTAGCCAGTCCTAT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11186842 130 - 11315646 ACTGGGCAGCCATTTACTGAGTGATTCTTTTCCCAAGATATTCCACTCTATTTCTTTTCTTTT-AA--AAAATATCCAGGGAATGAGGGCTCAATATAAACTCCCATTAGGTGATATTTGTGGGGACTCCTAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16876802 112 - 59632846 ACTG-GCGCCCATTTACCAAATGACCCATTT-CCATGGTGTTCCACTCTACTTCTTTTCTTTT-------------CAGGGAAGGAGGGCTC------AATTGTCCTTATCCAATCTTCTTAACCACTTCTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1368516 124 - 2520184 ATCGGGAAACCATTTACCACGGGACTCAATT-CCAAGGTGTTGATCTCTCTCTACTTTTTCTT-AATTAGAATCCCCA-GGAGTGAG------GTATAAATTCCTCTCAGCCAACCTCTTTAACCGTTCCTAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e mm10.chr8 86511985 1433 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=1170930.000000 s hg38.chr4_KI270789v1_alt 37428 192 + 205944 ----ACC-TT-TAAGATGGCCCGTCTTGA---CGTCTTGTTCAATGGTT--GC----CAAGCCGGCAAG------------------TGAGCATGCACATCCTCTTGGATTT-CGTC--CCCAAATACAAGAGGAAAGAAACAACGTCTCCCACTGTGAAGGATGGTGGCATCGTTAGTGGGAGGGTGTCCACTATATCTGTCTTCTTCTACTGCCCTGTAT-TTTCTC s panTro5.chr4 192829568 192 + 194502333 ----ACC-TT-TAAGATGGCCCATCTTGA---CGTCTTGTTCAATGGGT--GC----CAAGCTGGCAAG------------------TGAGCATGCACATCATCTCGGATTT-CGTC--CCCAAACACAAGGGGAAAGAAACAACGTCTCCCACTGTGAAGGATGGTGGCATCGTTAGTGGGAGGGTGTCCACTAGATCTGTCTTCTTCTACTGCCCTGTAT-TTTCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714161 192 + 195804263 ----ACC-TT-TAAGATGGCCCATCTTGA---CGTCTTGTTCAATGGGT--GC----CAAGCTGGCAAG------------------TGAGCATGCACATCATCTCGGATTT-CGTC--CCCAAACACAAGGGGAAAGAAACAACGTCTCCCACTGTGAAGGATGGTGGCATCGTTAGTGGGAGGGTGTCCACTAGATCTGTCTTCTTCTACTGCCCTGTAT-TTTCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750008 190 + 4876863 ----ACC-TT-TAAGATGGCCCATCTTGA---CGTCTTGTTCAATGGGT--GC----CAAGCCGGCAAG------------------TGAGCATGCACATCATCTTGAATTT-CATC--CCCAAACAC-AGGGGAAAGAAACAACGCCTCCCACTGTGAAGGATGGTGGCATCGTTAGT-GGAGGGTGTCCACTAGATCTGTCTTCTTCTACTGCCCTGTAT-TTTCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635681 192 + 115148730 ----ACC-TT-TAAGATGGCCCATCTTGA---TGTCTTGTTCAGTGGGT--GC----CAAGCCAGCAAG------------------CGAGCATGCACATCATCTCGGATTT-CGTC--CCCAAACACATGGAGAAAGAAACAAGGTCTCCCACCGTGAAGGATGGTGGCATCGTTAGTGGGAGGGTGTCCACTAGATCCATCTTGTTCTACTGCCCTGTAT-TTTCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918309 205 + 190429646 ----ATC-TT-TAAGATGGCCGATCTTGA---CTTGTTATTCAATGGGT--GC----CAAGCCAGCAAG------CGAGCACGAGCGCGAGCACGTACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCACCGTGAAGGATGGCTGCGTCCTTAGTGCGAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865762 205 + 189454096 ----ATC-TT-TAAGATGGCCGATCTTGA---CTTGTTATTCAATGGGT--GC----CAAGCCAGCAAG------CGAGCACGAGCGCGAGCACGTACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCACCGTGAAGGATGGCTGCGTCCTTAGTGCGAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247104 205 - 25927173 ----ATC-TT-TAAGATGGCCGATCTTGA---CTTGTTATTCAATGGGT--GC----CAAGCCAGCAAG------CGAGCACGAGTGCGAGCACGTACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCACCGTGAAGGATGGCTGCGTCCTTAGTGCGAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282160 211 + 4669795 ----ACC-TT-TAAGATGGCCGATCTTGA---CTTGTTGTTCAATGGGT--GC----CAAGCCAGCAAGCGAGCACGAGCACGAGCGCGAGCACGTACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCAGCATGAAGGATGGCTGCATCCTTAGTGCAAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134241844 205 + 135778131 ----ACC-TT-TAAGGTGGCCCATCTTGA---CTTCTTGTTCAATGGGT--GC----CAAGCCAGCAAG------CGAGCACGAGCGCAAGCACGTACTTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCAGCATGAAGGATGGCTGCATCCTTAGTGCGAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669149 205 - 2847728 ----ACC-TT-TAAGGTGGCCGATCTTGA---CTTGTTGTTCAATGGGT--GC----CAAGCCAGCAAG------CGAGCACGAGCGCAAGCACATACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCAGCATGAAGGATGGCTGCATCCTTAGTGCGAAGGTGTCCACCAGATCCGTCTTGTTCTACTGCCCTGTAT-TTTCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 801833 205 + 2368649 ----ACC-TT-TAAGATGGCCCATCTTGA---CTACTTCTTCAGTGGGT--AC----CAAGCCAGCAAA------CGAGCACCAGTGCGAGCACGAACCTCATCTCGGATTTCCTTC--CCCAAACACGAGGGGAAAGAAACAGTGTCTCCCACCATGAAGGATGGCTGCATCCTTACTGCAAAGGTGTCCACCAGATCTGTCTTGTTCTACTGCCCTGTAT-TTTCTG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11186972 193 - 11315646 ----GTCTTT-TAAGATGGCTCCTCTTGG---CTTCTTGTTCAATGGAT--GTTTAATAAGCAGGCAAA-----------GTGGGAACAAAGAAACAAGCCAACTCAGATATCCTTC--TCCAGGTGTTCGGAGCAAGAAACAATTTATTTCCTCTTAAGGGATGGTCTCAGTGTCAACG-GCAGGTGTCCACTAGATCCATCTT-----------CTGCAT-TTCATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513418 185 - 129401213 ----acc-ta-tAAGATGGCACATCTTAA---CTCTTTGTTCACTGGGT--GG----TAAGCAAACAAG--------------------------CAAATTATCTCAGACATCTCTCCTCTCAGGCATTCAAGGAATGAAACTCTTTATTTAACCT--AAAGTCTGCTGCACAAGCACTG-ATAGGTGTATCCTAGACCTATGTTCCTGGCCTGCCTTTCACATTTCTC i mm10.chr8 I 1433 C 0 s canFam3.chr16 16876914 196 - 59632846 ----ACC-TTGTAAGATGGTCCATGTTGAATTCTTCTTGTTCAGTGAAT--GC----TAAGCAGGCAAG--------------GGAGCATACAAACACATCATCTTATATATCATTC--TCCAAGAATTCAGGGACTAAATTACTTTTTTTCTTCATAAAAGATGATTGCATTGTCAGTGCCA-----CTCACTACATCTGTCTTGTTCTTCTACCCTGGGT-TTCATG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1368640 195 - 2520184 GCTTCCC-CT-TGAAAGAACGCACTT------CTTCTGGTTCAAGAAGCCGAA----CAAGCCAGCAGG------------------CAAGCAAGTGCCTC-CCTGACGTGCTCTTC--CCCAAGCTTGCAGCCAAAGAAGCAATTCACGCGGGCTCGAAGGACAGCTGCCTTGACAGTGGGAAGAGAGGCTCTAGCTCTTTCTTGCTTTCCTGCCCTGCAT-TTGATG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3888374 3254 + 3993831 I e micMur3.chr14 17467289 3792 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=79764.000000 s hg38.chr4_KI270789v1_alt 37620 10 + 205944 ATATCACAGC s panTro5.chr4 192829760 10 + 194502333 ATATCACAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714353 10 + 195804263 ATATCACAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750198 10 + 4876863 ATATCACAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635873 10 + 115148730 ATATCACAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918514 10 + 190429646 ATATCGCAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865967 10 + 189454096 ATATCGCAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247309 10 - 25927173 ATATCGCAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282371 10 + 4669795 ATATCGCAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242049 10 + 135778131 ATGTCACAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669354 10 - 2847728 ATATCGCAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802038 10 + 2368649 ATATCACAGC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3891628 10 + 3993831 ATATCACAAT i proCoq1.NW_012145301v1 I 3254 C 0 s otoGar3.GL873580 11187165 10 - 11315646 ATACCACAAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513603 7 - 129401213 ---CCACTGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16877110 10 - 59632846 ATACCACTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1368835 10 - 2520184 ATGACACTGT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17467289 3792 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=109606.000000 s hg38.chr4_KI270789v1_alt 37630 55 + 205944 TTGACCTCTCTAAATCTGATGGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTAT s panTro5.chr4 192829770 55 + 194502333 GTGACCTCTCTAAATCTGATGGAAGGAGAAGGACTGAAGTCAGAGAGGCTTGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714363 55 + 195804263 GTGACCTCTCTAAATCTGATGGAAGGAGAAGGACTGAAGTCAGAGAGGCTTGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750208 15 + 4876863 TTGACCTCTCTAA----------------------------------------AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635883 15 + 115148730 TTGACCTCTCTAA----------------------------------------AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918524 20 + 190429646 TTGACCTCTCTAAATCTAAT----------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865977 20 + 189454096 TTGACCTCTCTAAATCTAAT----------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247319 20 - 25927173 TTGACCTCTCTAAATCTAAT----------------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282381 20 + 4669795 TTGACCTCTCTAAATCTAAT----------------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242059 20 + 135778131 TTGACCTCTCTAAATCTAAT----------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669364 20 - 2847728 TTGACCTCTCTAAATCTAAT----------------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802048 20 + 2368649 TTGACCTCTCTAAATCTAAT----------------------------------- i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17471081 55 - 93316391 TTGACTTCTCTAAATCTGATGATAGGAGAAAGACTGAAGTCAGAGAGATTTGTAT i micMur3.chr14 I 3792 I 171 s proCoq1.NW_012145301v1 3891638 55 + 3993831 TTGACTTCTCTAAATCTGATGATAAGAGAAAAATTGAAGTCAGAAAGACTTATAT i proCoq1.NW_012145301v1 C 0 I 167 s otoGar3.GL873580 11187175 33 - 11315646 TGGGCTTCTCTATA------------------ACTGAAGTTAGAGAGATTT---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513610 55 - 129401213 TTGACTTCTTGAAATCTGATTAATGTTGAAAAGCTTAAGTGAGAGAGACTAGCAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16877120 55 - 59632846 TTGATTCCCCTAAGTCTGATGAAAGAAGAAAGCCTAAAGTCAAAGAGACTTGCAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1368845 49 - 2520184 TTGA-TTCTCCAAATCTGATGAAAGGAGAAATAC-----TCCAAGGGCTTTGTGC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=4605.000000 s hg38.chr4_KI270789v1_alt 37685 4 + 205944 CTGA s panTro5.chr4 192829825 4 + 194502333 CTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714418 4 + 195804263 CTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750223 4 + 4876863 CTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635898 4 + 115148730 CTGA i nomLeu3.chr7b C 0 C 0 s dasNov3.JH570353 1368894 4 - 2520184 CTCA i dasNov3.JH570353 C 0 I 199 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e canFam3.chr16 16877175 0 - 59632846 C e mm10.chr8 86513665 0 - 129401213 C e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 802068 0 + 2368649 C e manLeu1.NW_012102221v1 2669384 0 - 2847728 C e chlSab2.chr7 134242079 0 + 135778131 C e cerAty1.NW_012001672v1 3282401 0 + 4669795 C e macNem1.NW_012013133v1 24247339 0 - 25927173 C e macFas5.chr5 187865997 0 + 189454096 C e rheMac8.chr5 188918544 0 + 190429646 C e otoGar3.GL873580 11187208 0 - 11315646 C a score=381821.000000 s hg38.chr4_KI270789v1_alt 37689 70 + 205944 TGGAAGGAGAAAGACTGAAGTCAGAGAGGCATGTACGGAGCTTTGAGTTTTATTGTTTGACACGCAAGGG s panTro5.chr4 192829829 70 + 194502333 TGGAAGGAGAAAGACTGAAGTCAGAGAGGCGTGTACGGAGCTTTGAGTTTTATTGTTTGACATGCAAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714422 70 + 195804263 TGGAAGGAGAAAGACTGAAGTCAGAGAGGCGTGTACGGAGCTTTGAGTTTTATTGTTTGACATGCAAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750227 70 + 4876863 TGGAAGGAGAAAGACTGAAGTCAGAGAGGCGTGTACGGAGCTTTGACTTTTATTGTTTGACACCTGAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635902 70 + 115148730 GGGAAGGAGAAGGACTGAAGTCAGAGAGGCATGTACGGAGCTTTGACTTTTAGTGTTTGACATGCAAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918544 69 + 190429646 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTACGGAGCTTTGACTTTTATTGTTTGAAATGCAAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187865997 69 + 189454096 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTACGGAGCTTTGACTTTTATTGTTTGAAATGCAAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247339 69 - 25927173 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTACGGAGCTTTGACTTTTATTGTTTGAAATGCGAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282401 69 + 4669795 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTATGGAGCTTTGACTTTTATTGTTTGAAATGCAAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242079 69 + 135778131 -AGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTACAGAGCTTTGACTTTTATTGTTTGAAATACAAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669384 69 - 2847728 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTATGGAGCTTTGACTTTTATTGTTTGAAATGCAAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802068 69 + 2368649 -GGAAGGAGAAAGACTGAAGTCAGAGAGGCTTGTACAGAGCTTTGACTTTTATTGTTTGAAATGCAAGGG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11187208 40 - 11315646 ------------------------------ATGTCAAGATCTTGCAGTTTTGTCCTTTGGAACAAAAGGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513665 34 - 129401213 ------------------------------------AGAGGTGTCGGTTTTATTGTTTACCATGAAAGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16877175 32 - 59632846 --------------------------------------ATAGTTCAATTTGACTATTTGACATGAAAGGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e dasNov3.JH570353 1368898 199 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=257882.000000 s hg38.chr4_KI270789v1_alt 37759 60 + 205944 TCTGATACT--------TTTGTTTCTGGTCTCCTGTCAGGGTG---CCACTGACAGGG------CCTTACA---------------------------CTCTGC s panTro5.chr4 192829899 60 + 194502333 TCTGATACT--------TTTGTTTCTGGTCTCCTGTCAGGGTG---CCACTGACAGGG------CCTTACA---------------------------CTCTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714492 60 + 195804263 TCTGATACT--------TTTGTTTCTGGTCTCCTGTCAGGGTG---CCACTGACAGGG------CCTTACA---------------------------CTCTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750297 60 + 4876863 TCTGATACT--------TTTGTTTCTGGTCTCCTGTCAGGGTG---CCACTGACAGGG------CCTTACA---------------------------CTCTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112635972 28 + 115148730 TCTGATACT--------GTTGTTTCTGGTCTCCTGT-------------------------------------------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918613 60 + 190429646 TCTGATATT--------TTTGTGTCTGGTCTCCTGTCAGGGTG---CCACTGATGGGG------CCTTCCG---------------------------CTCTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866066 60 + 189454096 TCTGATATT--------TTTGTGTCTGGTCTCCTGTCAGGGTG---CCACTGATGGGG------CCTTCCG---------------------------CTCTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247408 60 - 25927173 TCTGATATT--------TTTGTGTCTGGTCTCCTGTCAGGGTG---CCACTGATGGGG------CCTTCCG---------------------------CTCTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282470 60 + 4669795 TCTGATGTT--------TTTGTGTCTGGTCTCCTGTCAGGGTG---CCACTGATGGGG------CCTTCCG---------------------------CTCTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242148 60 + 135778131 CCTGATATT--------TTTGTTTCTGGTCTCCTGTCCGGGTG---CCACTGACGGGG------CCTTACG---------------------------CTCTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669453 60 - 2847728 TCTGATGTT--------TTTGTGTCTGGTCTCCTGTCAGGGTG---CCACTGATGGGG------CCTTCCG---------------------------CTCTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802137 60 + 2368649 TCTGATATT--------TTTGTTTCTGCTCTCCTGTCAGGGTG---CCACTGACGGGG------CCTTACG---------------------------CTCTGC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11187248 60 - 11315646 TCTGATATC--------TTTGGTTGTGGTCTCCATTCAGACTT---CAGTTGTCTGTC------CCTTACA---------------------------TTCAGC i otoGar3.GL873580 C 0 I 1047 s mm10.chr8 86513699 53 - 129401213 TGCATTATTATTTTTTGTTTGTTTGTGTTCTTTGAGTAAGAAG---CAA--------A------CTTGCC---------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16877207 41 - 59632846 TCTGATACT--------TTTGTTTGTGTTCTGTGACTGGGTAA---CTATCT---------------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369097 96 - 2520184 tgtgctcct--------ttttttttttttttccatacagagcggctctccttatggggcaaactccttgcatgtggggttcccctacacgggggacacctctgc i dasNov3.JH570353 I 199 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=385348.000000 s hg38.chr4_KI270789v1_alt 37819 77 + 205944 TGAATGTAGCCC---------------GTAGCCCTTTGGTGAGCACCTTGGCCTGCACAGAAGGC------------CCCTG-------TGCTCAGC-AG--AGTCTTCAGGGA s panTro5.chr4 192829959 77 + 194502333 TGAGTGTAGCCC---------------GTAGCCCTTTGGTGAGCACCTTGGCCTGCACAGAAGGC------------CCCTG-------TGCTCAGC-AG--AGTCTTCAGGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714552 77 + 195804263 TGAGTGTAGCCC---------------GTAGCCCTTTGGTGAGCACCTTGGCCTGCACAGAAGGC------------CCCTG-------TGCTCAGC-AG--AGTCTTCAGGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750357 77 + 4876863 TGAGTGTAGCCC---------------GTAGCCCTTCGGTGAGCACCTTGGCCTGCACAGAAGGC------------CCCCG-------CGCTCAGC-AG--AGTCTTCAGGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636000 39 + 115148730 ---------------------------------------------------CCTGCACAGAAGGC------------CCCTG-------CACTCAGC-----AGTCTTCAGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918673 77 + 190429646 TGAGTGTAGCCT---------------GTAGCCCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCGGC-AG--AGTCTTCAGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866126 77 + 189454096 TGAGTGTAGCCT---------------GTAGCCCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCGGC-AG--AGTCTTCAGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247468 77 - 25927173 TGAGTGTAGCCT---------------GTAGCCCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCAGC-AG--AGTCTTCAGGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282530 77 + 4669795 TGAGTGTAGCCT---------------GTAGCCCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------TACTCAGC-AG--AGTCTTCAGGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242208 69 + 135778131 -GAGTGTAGCCT---------------G-------TCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCAGC-AG--AGTCTTCAGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669513 77 - 2847728 TGAGTGTAGCCT---------------GTAGCCCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCAGC-AG--AGTCTTCAGGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802197 77 + 2368649 TGAGTGTAGCCT---------------GTAGCTCTTCGGTGAGCACCTTAGCCTGCACAGAAGGC------------CCCTG-------CACTCAGC-AG--AGTCTTCAGGGA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86513752 56 - 129401213 -----------------------------------TAAATGAGTCTCTCAGTCCATATCCCA-GC------------CCCTA-------CCTTAGCT-AG--AATTACCAGAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16877248 62 - 59632846 -------------------------------TTCTTGGGTGAGTATCTTAGCCTTCAGGGAAGGC------------CCCTG-------TCCTTAGCCAG--AGTGACCTGGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369193 111 - 2520184 atggcacagccctccttgcacgcatcagcaccgcttgggccagctccaca--cgggtcaggaggcccgggctttgaaccctggacctcccacgtggc-aggcggccgcctgggc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11187308 1047 - 11315646 I a score=186680.000000 s hg38.chr4_KI270789v1_alt 37896 38 + 205944 GAAATTCACT--TCTGGG--------------------------TTTTCTCGGCGCCT--------------------------------GAGAATCC---------------- s panTro5.chr4 192830036 38 + 194502333 GAAATTCACT--CCTGGG--------------------------TTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714629 38 + 195804263 GAAATTCACT--CCTGGG--------------------------TTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750434 38 + 4876863 GAAATTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636039 38 + 115148730 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918750 38 + 190429646 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866203 38 + 189454096 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247545 38 - 25927173 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282607 38 + 4669795 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242277 38 + 135778131 GAAGTTCCCT--CCTGGG--------------------------CTGTCTCGGAGCCT--------------------------------GAGAATCG---------------- i chlSab2.chr7 C 0 I 160 s manLeu1.NW_012102221v1 2669590 38 - 2847728 GAAGTTCACT--CCTGGG--------------------------CTTTCTCGGAGCCT--------------------------------GAGAATCC---------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802274 38 + 2368649 GAAGTTCACT--CCTGGG--------------------------CTTTCTCAGAGCCT--------------------------------GAGAATCC---------------- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11188355 28 - 11315646 gaaaaccact--gCTG----------------------------------TGGACTCA--------------------------------GAGGAC------------------ i otoGar3.GL873580 I 1047 C 0 s mm10.chr8 86513808 34 - 129401213 -GAAATCTCT--CC---A--------------------------TTCTCTTTGGATCA--------------------------------AATAATGA---------------- i mm10.chr8 C 0 I 2 s canFam3.chr16 16877310 40 - 59632846 GGAATCTACT--CCAATT--------------------------CTTGCTCATAGGCT------------------------------CAGAGAATCC---------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369304 114 - 2520184 caaatccacttgccTGAAGCGTTTCTCCTTGACGTCAGTGTGTCTTTCCCCTTAGCCTGCAGGGCAGGCCGTGCCTTCAGCCAGTTCCCAGAGACACCCGTGCTAGGGGCGTTC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=89708.000000 s hg38.chr4_KI270789v1_alt 37934 15 + 205944 -TCTTCAAGGTCTCAG s panTro5.chr4 192830074 15 + 194502333 -TCTTCAAGGTCTCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714667 15 + 195804263 -TCTTCAAGGTCTCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750472 15 + 4876863 -TCTTCAGGGTCTCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636077 15 + 115148730 -TCTTTAAGGCCTCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918788 15 + 190429646 -TCTTCAAGGCCTCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866241 15 + 189454096 -TCTTCAAGGCCTCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247583 15 - 25927173 -TCTTCAAGGCCTCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282645 15 + 4669795 -TCTTCAAGGCCTCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242475 15 + 135778131 -TCTTCAAGGCCTCAG i chlSab2.chr7 I 160 C 0 s manLeu1.NW_012102221v1 2669628 15 - 2847728 -TCTTCAAGGCCTCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802312 15 + 2368649 -TCTTCAAGGCCTCAG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11188383 15 - 11315646 -CTGTCAGAGTCTCCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513844 15 - 129401213 -ATGTCACAGTCTTGC i mm10.chr8 I 2 C 0 s canFam3.chr16 16877350 12 - 59632846 ----TTCATGTCTCAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369418 15 - 2520184 TCCTCCAGGGCCTGC- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3891693 167 + 3993831 I e micMur3.chr14 17471136 171 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=453208.000000 s hg38.chr4_KI270789v1_alt 37949 41 + 205944 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGAGTTCA s panTro5.chr4 192830089 41 + 194502333 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGAGTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714682 41 + 195804263 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGAGTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750487 41 + 4876863 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGAGTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636092 41 + 115148730 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGAGGTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918803 41 + 190429646 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGGGTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866256 41 + 189454096 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCCCTGGGTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247598 41 - 25927173 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGGGTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282660 41 + 4669795 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGGGTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242490 41 + 135778131 TCTTCCATCTCTCGTCCTGCTCTGCCCGCTCTCTGGGTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669643 41 - 2847728 TCTTCCATCTCTAGTCCTGCTCTGCCCTCTCTCTGGGTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802327 40 + 2368649 TCTTCCATCTCTAGTCCTGCTCTG-CCTCTCTCTGGATTCA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17471307 41 - 93316391 TCTTCCATCTCTCATTTTGTTCTGCCCTCTCTCTGAGTTCA i micMur3.chr14 I 171 I 323 s proCoq1.NW_012145301v1 3891860 41 + 3993831 TCTTCCATTTCTAGTTTTGCTCTGCCCTTTCTCTGAGTTCA i proCoq1.NW_012145301v1 I 167 C 0 s otoGar3.GL873580 11188398 41 - 11315646 GCTTCCCTCCCTAGTTTTGCTCCACCCTCTCTCTGAGTTCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513859 41 - 129401213 TCTTCTGTGGCCAGTCTCACTTTACCCTTCCTGTGAGTTTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16877362 40 - 59632846 -TTTCCCCCTCTAGCCCTGCTCTGCTCTCTCTATAAGTTCA i canFam3.chr16 C 0 I 29 s dasNov3.JH570353 1369433 41 - 2520184 TCTTCTCTCGCTAGTCCTGCTTCGCACTCTCTCCTAGTTCA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=48676.000000 s hg38.chr4_KI270789v1_alt 37990 9 + 205944 -CTAAGATTG s panTro5.chr4 192830130 9 + 194502333 -CTAAGATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714723 9 + 195804263 -CTAAGATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750528 9 + 4876863 -CTAAGGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636133 9 + 115148730 -CTAAGATTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188918844 9 + 190429646 -CTAAGATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866297 9 + 189454096 -GTAAGATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247639 9 - 25927173 -CTAAGATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282701 9 + 4669795 -CTAAGATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242531 9 + 135778131 -CTAAGATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669684 9 - 2847728 -CTAAGATTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802367 9 + 2368649 -CTAAGATTC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3891901 9 + 3993831 -CGATGTTTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11188439 9 - 11315646 -CTATGATTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513900 8 - 129401213 -CTGTCATT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16877431 9 - 59632846 -ttaagattt i canFam3.chr16 I 29 I 183 s dasNov3.JH570353 1369474 9 - 2520184 CCTCAAGTA- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17471348 323 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=376047.000000 s hg38.chr4_KI270789v1_alt 37999 46 + 205944 TGGATCTTCTAGGTTTTCACAATGGACTTTTCCTTCTCATTTTGCC s panTro5.chr4 192830139 46 + 194502333 TGGATCTTCTAGGTTTTCACAATGGACTTTTCCTTCTCATTTTGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714732 46 + 195804263 TGGATCTTCTAGGTTTTCACAATGGACTTTTCCTTCTCATTTTGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750537 46 + 4876863 TGGATCTTCTAGGTTTTCACAATGGACTTTTCCTTCTCATTTTGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636142 46 + 115148730 TGGATCTTCTAGGTTTTCACAATTGACTTTTCCTTCTCATTTTGCC i nomLeu3.chr7b C 0 I 378 s rheMac8.chr5 188918853 46 + 190429646 TGGATCTTCTAGGTTTTCACAGTGGACTTTTCCTTCTCATTGTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866306 46 + 189454096 TGGATCTTCTAGGTTTTCACAGTGGACTTTTCCTTCTCATTGTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247648 46 - 25927173 TGGATCTTCTAGGTTTTCACAGTGGACTTTTCCTTCTCATTGTGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282710 46 + 4669795 TGGATCTTCTAGGTTTTCACAATTGACTTTTCCTTCTCATTGTGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242540 46 + 135778131 TGGATCTTCTAGGTTTTCACAGTTGACTTTTCCTTCTCATTGTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669693 46 - 2847728 TGGATCTTCTAGGTTTTCACAATTGACTTTTCCTTCTCATTGTGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802376 46 + 2368649 TGGATCTTCTAGGTTTTCACAATTGACTTTTCCTTCTCATTGTGCC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3891910 46 + 3993831 TGAATCTTCCCAGTTTTTATTATGGGCTTTCCCTTTTCATTTTACC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11188448 44 - 11315646 TAGATCTTGTGAG-TTGTACTATTGCCTCTCCTTTTTCATTTT-CC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513908 41 - 129401213 ----TTTTCTGAGTTTACTCTTCTGGGTTTTTGTTATTAGAGTCC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16877623 46 - 59632846 TGGATTTTCTTGGTTTGCATTATTGGCTTTCCCTTTTAATTTTGCC i canFam3.chr16 I 183 C 0 s dasNov3.JH570353 1369483 45 - 2520184 TGGACCTTCT-GGTTTTTATTATTGGCTTTCCCCTTTCGTGTCACC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17471348 323 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=357455.000000 s hg38.chr4_KI270789v1_alt 38045 66 + 205944 CTGCTCTG---TGCTTTGTACTTGTG-CAGCATGCAGTTGTCTGAGCCCTG-TGCAGAGTCTCAACTCCCA s panTro5.chr4 192830185 66 + 194502333 CTGCTCTG---TGCTTTGTATTTGTG-CAGCATGCAGTTGTCTGAGCCCTG-TGCAGAGTCTCAACTCCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714778 66 + 195804263 CTGCTCTG---TGCTTTGTATTTGTG-CAGCATGCAGTTGTCTGAGCCCTG-TGCAGAGTCTCAACTCCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750583 66 + 4876863 CTGCTCTG---TGCTTTGTATTTGTG-CAGCATGCAGTTGTCTGAGCCCTG-TGCAGAGTCTCAACTCCCA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188918899 63 + 190429646 Ctgctctg---tgctctgtatttgtg-cagcat---gttgtctgagcacta-tgcAGAGTCTCCGCTCCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866352 63 + 189454096 Ctgctctg---tgctctgtatttgtg-cagcat---gttgtctgagcacta-tgcAGAGTCTCCGCTCCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247694 63 - 25927173 Ctgctctg---tgctctgtatttgtg-cagcat---gttgtctgagcacta-tgcAGAGTCTCCGCTCCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282756 63 + 4669795 CTGCTCTG---CGCTTTGTGTTTGTA-CAGCAT---GTTGTCTGAGCACTA-TGCAGAGTCTCCGCTCCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242586 63 + 135778131 Ctgctctg---tgctctgtatttgtg-cagcat---gttgtctgagcacta-tgcAGAGTCTCCGCTCCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669739 63 - 2847728 CTGCTCTG---CGCTTTGTGTTTGTA-CAGCAT---GTTGTCTGAGCACTA-TGCAGAGTCTCCGCTCCCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802422 63 + 2368649 CTGCTCTG---GTTCTTGTATTTGTG-CAGTAT---GTTGTCTGAGCACTA-TGCAGAGTCTCCGCTCCCA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3891956 67 + 3993831 TTGCTCTG---GGCTTTCTATTTGTGACAGCTTGGAGTGGTCTGAGCCCTG-TATAGAGTCTCAAATCCCA i proCoq1.NW_012145301v1 C 0 I 203 s otoGar3.GL873580 11188492 60 - 11315646 TTACTCTG---GTCTCTCTACTTGTGACAACTTGGAATGGTCTAAGCCCTG-GATAGAGTCCCA------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513949 46 - 129401213 TTGATTTT---GGCTTCGAATGGATT-C--------------------TCA-CACAGAGTCTCAAACCCCA i mm10.chr8 C 0 I 1 s canFam3.chr16 16877669 71 - 59632846 TTGCTCTGCCTTGCTTGTTATTTGTGACAGCTTGGAGTTGTCTGAGCCCCAGCACTAAATCTCAAATCTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369528 61 - 2520184 -----CTG----ACTTCCTGTCTGGGATGGAGTGAAGTGGCCCAGCCCCTG-AGCAGAGCGTCAGATCCTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17471348 323 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e nomLeu3.chr7b 112636188 378 + 115148730 I a score=688768.000000 s hg38.chr4_KI270789v1_alt 38111 135 + 205944 GCCCTCTTGTTTACCTAGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATTTCTCTGGAGCTGTGCATTCCAGGATTCCGGTCAAGAGAGAAATAATGC-T-CACATGCTTCCTCGG---AGGACTAGGACTGACCCC s panTro5.chr4 192830251 135 + 194502333 GCCCTCTTGTTTACCTAGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATTTCTCTGGAGCTGTGCATTCTAGGATTCCGGTCAAGAGATAAATAATGC-T-CACATGCTTCCTCAG---AGGACTAGGACTGACCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714844 135 + 195804263 GCCCTCTTGTTTACCTAGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATTTCTCTGGAGCTGTGCATTCTAGGATTCCGGTCAAGAGATAAATAATGC-T-CACATGCTTCCTCAG---AGGACTAGGACTGACCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750649 135 + 4876863 GCCCTCTTGCTTACCTAGCATTGTGAATGCACACTGTGA--CTC-TGGGTGGCATTTCTCTGGAGCTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCTCGG---AGGACTAGGACCGACCCC i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188918962 136 + 190429646 GCC--CTCGTTTACCTCGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATGTCTCCGGAACTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCCCGGAGAAGGACTAGGACTGACCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866415 136 + 189454096 GCC--CTCGTTTACCTCGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATGTCTCCGGAACTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCCCGGAGAAGGACTAGGACTGACCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247757 136 - 25927173 GCC--CTCGTTTACCTCGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATGTCTCCGGAACTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCCTGGAGAAGGACTAGGACTGACCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282819 136 + 4669795 GCC--CTTGTTTACCTCGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATTTCTCCGGAACTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCCCGGAGAAGGACTAGGACTGACCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242649 138 + 135778131 GCCCTCTTGTTTACCTCGCGTTGTGAACGCACACTGTGG--TTC-TGGGTGGCATTTCTCCGGAACTGTGCATTCCGGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCTGGGAGAAGGACTAGGACGGACCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669802 136 - 2847728 GCC--CTTGTTTACCTCGCATTGTGAATGCACACTGTGA--TTC-TGGGTGGCATTTCTCAGGAACTGTGCATTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCCCGGAGAAGGACTAGGACTGACCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802485 138 + 2368649 GCCCTCTGGTTTACCTCGCATTGTGAATGCACACCGTGA--TTC-TGGGTGGCATTTCTCTGGAACTGTGCGTTCCAGGATTCCGGTCATGAGATAAATAATGC-T-CACATGCTTCCTGGGAGAAGGACTAGGACTGACCCT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11188552 107 - 11315646 ---------------TCATGTTAT-----------------TCA-GGGGCAACATTTCTCTGGAACTGTAGA-TCCAGGACCCCAATCATGGAATAAATGACGCTT-CATGTGC-TCCTCAGAGAAGGAACTGGATTGATCCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86513996 135 - 129401213 ATCTTTTTGTAGGCCGGACATGGT---TGCATGTGGTGATGTTT-CAGGCATATTTTCTCTAGAGCTGAGGATTCTGGAATGCCAGGCGGGAGGTAAATAATAC----ACATGTTTCTTCAGAAGAGGTTGAGGGCTGGTCCT i mm10.chr8 I 1 C 0 s canFam3.chr16 16877740 137 - 59632846 ---ATTTTTTTTGTATGGCATTGTGAATGCATGGGGTGA--TTCAGGGGCAACACTTCTCTGGAACTGTGAATTCCAAGTTGACAGTCATGGGGTAAATGATGC-TGCACTGGCTTCTTCAGACAACAAACTGGATAGACCCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369589 88 - 2520184 --------------------------------------------------GCCCCCCTCCTACGTCTGGGCATTCTGAAGGCCAGGGCCATTCAGGGACAACGT-G-TCCATGATCCTATCGAGAAGAA---GGACAGGGGCC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892023 203 + 3993831 I e micMur3.chr14 17471348 323 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e nomLeu3.chr7b 112636188 378 + 115148730 I a score=441369.000000 s hg38.chr4_KI270789v1_alt 38246 62 + 205944 -----GCTGCATGCATCTGA-AGAGGT-AATGGTCCCTACAGTGTGGTCCTTTTTGGGCAAGGCTTGTT s panTro5.chr4 192830386 62 + 194502333 -----GCCGCATGCATCTGA-AGAGGT-AATGGTCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192714979 62 + 195804263 -----GCCGCATGCATCTGA-AGAGGT-AATGGTCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750784 62 + 4876863 -----GCTGCATGCATCTGA-AGAGGT-AGTGGTCCCTACGGTGTGATCCTTTTTGGGCAAGGCTTGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636566 62 + 115148730 -----GCTGCATGCATCTGA-AGAGGT-AATGGTCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i nomLeu3.chr7b I 378 C 0 s rheMac8.chr5 188919098 62 + 190429646 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTCTGGGCAAGGCTTGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866551 62 + 189454096 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247893 62 - 25927173 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3282955 62 + 4669795 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242787 62 + 135778131 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2669938 62 - 2847728 -----GCTGCATGCATCTGA-AGAGGT-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802623 62 + 2368649 -----GCTGCATGCATCTGA-AGAGGA-AATGATCCCTACAGTGTGATCCTTTTTGGGCAAGGCTTGTT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11188659 56 - 11315646 -----GCTGCATGCGTCTGG-AAAGGT-AATGCTTCCTGCAATATAATCCTTT------AGGCCTTGCA i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86514131 61 - 129401213 -----GATGCATACTTTTGA-AAAGGAGAAGGATCTCTGCAATGCTGCTCTTCCCTGGCAATGC-CGT- i mm10.chr8 C 0 I 2 s canFam3.chr16 16877877 63 - 59632846 -----GCTGCATGCATCTGAGAAAGGT-AGTGGTTTCTGCAATGTAATCCTTTGTAGACAATGCTTACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369677 40 - 2520184 GGGGGGCTGCACC------A-CGGGAG-CAGGGTGCCGGC------------TGCTGGCA--------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892023 203 + 3993831 I e micMur3.chr14 17471348 323 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=46627.000000 s hg38.chr4_KI270789v1_alt 38308 6 + 205944 AATATC s panTro5.chr4 192830448 6 + 194502333 AATATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715041 6 + 195804263 AATATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750846 6 + 4876863 AATATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636628 6 + 115148730 AATATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919160 6 + 190429646 AGTATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866613 6 + 189454096 AGTATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247955 6 - 25927173 AGAATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283017 6 + 4669795 AGTATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242849 6 + 135778131 AGTATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670000 6 - 2847728 AGTATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802685 6 + 2368649 AGTATC i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17471671 6 - 93316391 AATATT i micMur3.chr14 I 323 C 0 s proCoq1.NW_012145301v1 3892226 6 + 3993831 AATATC i proCoq1.NW_012145301v1 I 203 C 0 s otoGar3.GL873580 11188719 6 - 11315646 AATATC i otoGar3.GL873580 I 4 I 530 s mm10.chr8 86514194 4 - 129401213 CACA-- i mm10.chr8 I 2 C 0 s canFam3.chr16 16877940 6 - 59632846 AATATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369717 6 - 2520184 CGTCTC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=3784890.000000 s hg38.chr4_KI270789v1_alt 38314 361 + 205944 TGCTCTTTCATTACTGTGTAGTAGGGCAAAGTCACTGCAAATGGCCGTTTCCCGGTTT---CTAATGTCCTGCTTTTCCTAGCCCCCTAAGGTACTTTGACCACTGG--TTATGAACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTTTCTTTCTCGAAGGGAATCATTTGCATCTCACTGTGGTACCAAGTGTCGCCGTTTCCC-TCAACATGCTGGTAACCATCAGTCCCACAACAGAGTGAACCAAGAATGCAGAGGGCTTTTTGTGCTC-AATATCTTTGCTT s panTro5.chr4 192830454 361 + 194502333 TGCTCTTTCATTACTGTGTAATAGGGCAAAGTCACTGCAAATGGCCGTTTCCCGGTTT---CTAATGTCCTGTTTTTCCTAGCCCCCTAAGGTACTTTGACCACTGG--TTATGAACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTTTCTTTCTCGAAGGGAATCATTTGCATCTCACTGTGGTACCAAGTGTCGCCGTTTCCC-TCAACATGCTGGTAACCATCAGTCCCACAACAGGGTGAACCAAGAATGCAGAGGGCTTTTTGTGCTC-AATATCTTTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715047 361 + 195804263 TGCTCTTTCATTACTGTGTAATAGGGCAAAGTCACTGCAAATGGCCGTTTCCCGGTTT---CTAATGTCCTGTTTTTCCTAGCCCCCTAAGGTACTTTGACCACTGG--TTATGAACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTTTCTTTCTCGAAGGGAATCATTTGCATCTCACTGTGGTACCAAGTGTCGCCGTTTCCC-TCAACATGCTGGTAACCATCAGTCCCACAACAGGGTGAACCAAGAATGCAGAGGGCTTTTTGTGCTC-AATATCTTTGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3750852 360 + 4876863 TGCTCTTTCATTACTGTGTAGTAGGGCAAAGTCACTGCAAATGGCCGTTT-CCGGTTT---CTAATGTCCTGTTTTTCCTAGCCCCCTAAGGTACTTTGAGCACTGG--TTATGGACCAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTTTCTTTCTCGAAGGGAATCATTTGCATCTCACTGTGGTACCAAGTGTCGCCGTTTCCC-TCAACATGCTGGTAACCATCAGTCCCACAACAGGGTGAACCAAGAATGCAGAGGGCTTTTTGTGCTC-AATATCTTTGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636634 361 + 115148730 TGCTCTTTCATTATTGTGTAGTAGGGCAAAGTCACTGCAAATGGCCATTTCCCAGTTT---CTAATGTCCTGTTTTTCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTTTCTTTCTCAAAGGGAATCATTTGCATCTCACTGTGGTACCGAGCGTCGCCGTTTCCC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGTAGAGGGCTTTTTGTGTTC-AATATCTTTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919166 361 + 190429646 TGCTCTTTCCTTGTTGTGTAATAGGGAAAAGTCACTACAAGTGGCCACTTCCCAGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTGTTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATCTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGTATTTTGTGTTC-AATATATTTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866619 361 + 189454096 TGCTCTTTCCTTGTTGTGTAATAGGGAAAAGTCACTACAAGTGGCCACTTCCCAGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTGTTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATCTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGTATTTTGTGTTC-AATATATTTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24247961 361 - 25927173 TGCTCTTTCCTTGTTGTGTAATAGGGAAAAGTCACTACAAGTGGCCACTTCCCAGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTGTTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATCTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGTATTTTGTGTTC-AATATATTTGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283023 361 + 4669795 TGCTCTTTCCTTATTGTGTAGTAGGGAAAAGTCACTACAAATGGCCACTTCCCGGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATGTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGTATTTTGTGTTC-AATATATTTGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134242855 361 + 135778131 TGCTCTTTCCTTACTGTGTAGTAGGGCAAAGTCACTACAAATGGCCACTTCCCAGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATAGACAAGGCTGTTGGCTGTTCTATTTTTAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCGTCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATCTCACTGTGGTACCGAGTGTAGTCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGCATTTTGTGTTC-ACTATCTTTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670006 361 - 2847728 TGCTCTTTCCTTATTGTGTAGTAGGGAAAAGTCACTACAAATGGCCACTTCCCGGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTCGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATGTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAAGGTATTTTGTGTTC-AATATATTTGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 802691 361 + 2368649 TGCCCTTTCATTATTGGGTAGTAGGGCAAAGTCACTACAAATGGCCACTTTCCAGTTT---CTAATGTCCTGTTTTGCCTGGCCCCCTAAGGTACTTTGACCACTGG--TTATGGACAAGGCTGTTGGCTATTCTATTTTCAAACAGCAGTTGTCTGTTAGGAATAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGTCTGTCTGTCTTTCACAAAGGGAATCATTTGCATCTCACTGTGGTACTGAGCGTAGCCATTTCAC-TCAACATGCTGGTAACCATCAGTCACACAACAGGGTGAACCAAGAATGCAGAGGGTATTTTGTGTTC-AGTGTCTTTGCTT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17471677 361 - 93316391 TACTCTTTTATTATTGTGTGGTAGAGCAAAGTCACTACAAATGGCCATTTCTCAACAT---ATAATGTTCTA-TTTTCCTGGTCCTCTAAGGTACTTTGACCACTGG--TTGTGCACAAGGAATTTGGCTATTCTATTTTCAAACAGCAGTGGTCGGTTAGGGCTAACTATCAATTTAATGGCGCCAATGGCCATCAAAACAAGGAAAATTATACAGTAAAGTCGGTCTTTCTTTTATAAAGGGAATCATTTGCATCTCATTGCGGTCCTGAGCACGGCCTTTTCCC-GCAACACTTTCGTAACCATCATTCACACAAGAGGGTGGACCAAGAATGCAAAGGGCATTTTATTTTC-AATATCTTTACTT i micMur3.chr14 C 0 I 211 s proCoq1.NW_012145301v1 3892232 360 + 3993831 TGCTCTTTTATTGTTGTGTGGTAGAGCAAAGCCACTACAAATGGCCATTTCCCAATAT---ATGATGTTCTG-TTTTCCTGGTCCTCTAAGGTACTTTGACCACTGG--TTGTGGACAAGGAATTTGGCTATTCTATTTTCAAACAGCAGTGGTCAGTTGGGTCTAACTATCAATTTAATGGCGCCAATGGCTATCAAAACAAGGAAAATTACACAGT-AAGTCTGTCTTTCTTTTATAAAGGGAATCATTTGCATTTCATTGCGGTCCTGAGCATGGCCTTTTGCT-GCAACACTTTCGTAACCATCATTCACACAAGAGGGTGGACCAACAATGCAAAGGGCATTTTATTTTC-AATATCTTTGCTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11189255 361 - 11315646 TGCTCTTCTGTCATTGTGGAATACAGCCAAGTCTCTACGAATGGCCATTTCCAGATATGCCAAAATGTTC---TTTTGCTGGTCCTCTAAAGTATTTCGACCACTGG--TTGTGTACAA-GAATTTAGCCATTCTATTTTCAAACAACTGTGGTTGGTTAGGTCTAACTATCAATTTAATGGCGCCAATGACCGTCAAAATAAGAAAAATTACACAGT-AAGTCTGTCTTTCTTTTATAAAAGGAATCATTTGCATTTCATTGTGGCCCTGAGCAGGGCCTGTTCCCGGCAGCACTTTTATAACCATTGTTCACACAAGAGGGTGAACCAAGGATGTAAAGGGCGTTTTGTTGTC-AATATCTTTGCTT i otoGar3.GL873580 I 530 C 0 s mm10.chr8 86514198 360 - 129401213 GGCTTTCCTGTTATTGTACAGATGACCAATGGCACTG-AAATGGCCATTGCTCTCTAT---ATAATCCGGTG-TTTGTCTGGTCTTCTACGGTACTTTGACCACTAG--CTGAACACAAAGATTTTGACTATTCTATTTTCAAACAGCAGTAGTCAGTTAGGTCTAACCATCAATTTAATGGCGCCAATGGCCATCAAAACAAAGAAAATTACACAGT-AAGCCTGGCTTTCTTTTATAAAGGGAATAGTTTTCATTTCATTGTGGTATAAAGCACAGAATTTTCCT-CCAGTACTTTTGTAGCCATTCTTCACGCCAGATGGTAAGCTGAGAATGCAGAGATCATTTTATTTTTAAATAACTTTGTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16877946 355 - 59632846 TGTTCTTTTATTATTGTGTAGT-----AAAGGTACTACAAATGGCCACTTCTCAGTAT---AAAATGTTTTGTTTTGCTTGGTCTTTTAAGGTA-TTTGACCACTGGTTTTATGTACCAGGATTTTGGCTATTCTATTTTCAAACAACAGTGGTCTTTTAGGTCTAACTATCAATTTAATGGCGCCAATGATGGTCAAAACAAAGAAAATTATACAGT-AAATCTGCCTTTCTTTCATAAAGGGAATCATTTGCATTGCATTGTGGCACTGAACATAGACTTTTTCC--CAATATTTCCATAACCATCATTCACACAAAAGGGTGAACCAGGAATGCAAAGAGCATTTTATTCT--AATGTCTTTGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1369723 353 - 2520184 TGCTCCTCTGTTGCTGTGGGG-AACGCGACGCCACTGCAAATGGCCATTTCCCAGGAG---C-AGTGTCCCACTTAGCCTGCTCATCCGAGGTATTTTGACCCCTGG--TCGTGTGCAAGCATTTCGGCTATTCTATTTTCTAACA---GTGGTCTTTTAGGTCTAACTATCAATTTAATGGCGCCACAGGCCATCACAACAAAGAAAATTACACGGT-AAGCCTCTCTGTCTTTCA-AAAGGGAATCATTTCCATTGCATTGTGGTGGCGAGCAGAGCTGTTTT-C-TCAACGCTTTCATGACAACC-CTCACACGTGACGGTGAGCCCAGCCCGCAAAGGGCATTTCCGTTTC-AACATCTTTGCTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=328397.000000 s hg38.chr4_KI270789v1_alt 38675 42 + 205944 TGGCCAAGGAAACACTTTCCATAATATCACGTTTACTTTTTT- s panTro5.chr4 192830815 42 + 194502333 TGGCCAAGGAAACACTTTCCATAATATCACGTTTACTTTTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715408 42 + 195804263 TGGCCAAGGAAACACTTTCCATAATATCACGTTTACTTTTTT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3751212 42 + 4876863 TGGCCAAGGAAACACTTTCCATAATATCACGTTTACTTTTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112636995 42 + 115148730 TGGCCAAGGAAACACTTTCCATAATATCACGTTTACTTTTTT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919527 42 + 190429646 TGGCCAAGGAAACACTTTCCGTAACATCATGTTTACTTTTTT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187866980 42 + 189454096 TGGCCAAGGAAACACTTTCCGTAACATCATGTTTACTTTTTT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248322 42 - 25927173 TGGCCAAGGAAACACTTTCTGTAACATCACGTTTACTTTTTT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283384 42 + 4669795 TGGCCAAGAAAACACTTTCCATAACATCACGTTTAGTTTTTT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243216 42 + 135778131 TGGCCAAGGAAACACTTTCCGTAACATCACGTTTACTTTTTT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670367 42 - 2847728 TGGCCAAGAAAACACTTTCCATAACATCACGTTTAGTTTTTT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803052 42 + 2368649 TGGCCAAGGAAACTCTTTCCGTAACATCATGTTTACTTTTTT- i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3892592 42 + 3993831 CAACTATGGAAACACTTTCTATGGCATCACTTTTATTTTTTT- i proCoq1.NW_012145301v1 C 0 I 168 s otoGar3.GL873580 11189616 42 - 11315646 CATCTATAGAAACACTTCCTATAACATTGTTTTCACTTTTTT- i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86514558 42 - 129401213 CAGCTGTACAGATATTTTCTGTAGAATCACTGCTACTTTTCT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16878301 41 - 59632846 CTACTCTGGAAATAGTTTTAGTAGCATCAC-TTTATTATTTG- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370076 35 - 2520184 --------CGAATGCTTTCTATGGCATTACTTTTTATTATTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17472038 211 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=645803.000000 s hg38.chr4_KI270789v1_alt 38717 89 + 205944 AACTTTTATAGTACAGAGTGAAACATG-TAGAAAATAGTAGCTGTCTCGAAAGAGATGGGAAGACTAAGCCTA------GTGATG--AATGA------GGCACA s panTro5.chr4 192830857 89 + 194502333 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTGGCTGTCTCGAAAGAGATGGGAAGACTAAGCCTA------GTGATG--AATGA------TGCACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715450 89 + 195804263 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTGGCTGTCTCGAAAGAGATGGGAAGACTAAGCCTA------GTGATG--AATGA------TGCACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3751254 89 + 4876863 AACTCTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTCGAAAGAGATGGGAAGACTAAGCCTA------GTGATG--AATGA------CGCACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637037 89 + 115148730 AACTTTTATAGTACAGAGTGAACCACG-TAGAAAATAGTAGCTGTCTCGAAAGAGATGGGAAGACTAAGTCTA------GTGATG--AATGA------GGCACA i nomLeu3.chr7b C 0 I 200 s rheMac8.chr5 188919569 89 + 190429646 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTCAAAGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867022 89 + 189454096 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTCAAAGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248364 87 - 25927173 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTC--AGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283426 89 + 4669795 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTCAAAGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243258 89 + 135778131 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATGGTAGCTGTCTTGAAAGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670409 89 - 2847728 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTCAAAGAGATGGGAAGAGTCAACCTA------GTGATG--AATGA------GGCACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803094 89 + 2368649 AACTTTTATAGTACAGAGTGAACCATG-TAGAAAATAGTAGCTGTCTTGAAAGAGATGAGAAGAGTCACCCTA------GTGATG--AGTGA------GGCTCA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11189662 94 - 11315646 AACATTTATAGTTCAGAGTAAATCAAG-TA-AAAATAATAGCTTTCTAGAAAAAGAAAGAACGAGCAAGGCTACTGATGGTGATG--AGTGA------TGTGCA i otoGar3.GL873580 I 4 C 0 s mm10.chr8 86514600 81 - 129401213 ------AATAGCCCAGAGTGATTCAGGAGAAAAAAAAATCACATTTTTATAAGAG--TAAAAGAATATGACTA------GTGAT---ATTGA------TGTATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16878342 95 - 59632846 AACATTTATGGTACAGAGTGAACCAAG-TAGAAAATAATAGCTTTCTAGAAGAAGAAAGAAAATGTAAGCCTCATGATGGTGGTG--AATGG------TGTGCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370111 97 - 2520184 AACCTTTATAGTAGAAAGTGAACCAAA-CGTAAAGTTATAGCATTCTAGAAAGGAAAAGAGAGACTAAGCTTA------GTGATGGTGATAAACCATTTGCACA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892634 168 + 3993831 I e micMur3.chr14 17472038 211 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=27164.000000 s hg38.chr4_KI270789v1_alt 38806 33 + 205944 ---------CATAGAAAGGGA---CAGGTGCACCAGGACATGGGT s panTro5.chr4 192830946 33 + 194502333 ---------CATAGAAAGGGA---CAGGTGCACCAGGACATGGGT i panTro5.chr4 C 0 I 150 s panPan2.chr4 192715539 33 + 195804263 ---------CATAGAAAGGGA---CAGGTGCACCAGGACATGGGT i panPan2.chr4 C 0 I 150 s gorGor5.CYUI01015356v1 3751343 33 + 4876863 ---------CATAGAAAGGGA---CGGGTGCACCAGGACATGGGT i gorGor5.CYUI01015356v1 C 0 I 434 s nomLeu3.chr7b 112637326 33 + 115148730 ---------CATAGAAAGGGA---CAGGTGCACCAGGACACGGGT i nomLeu3.chr7b I 200 C 0 s colAng1.NW_012116221v1 803183 33 + 2368649 ---------CGTAGAAAGGGA---CAGGCGCACCAGAACACGGGT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11189756 12 - 11315646 -------------------CA---TGAGTACACC----------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86514681 12 - 129401213 ---------CATATCAAAGGT------------------------ i mm10.chr8 C 0 C 0 s canFam3.chr16 16878437 32 - 59632846 ---------CATCAGAAGAG----TAGACACACAAGTATACAGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370208 45 - 2520184 CAAGAGCACAGCAGAGAGGAAACTTATTTACACCTGTATCTGCAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892634 168 + 3993831 I e micMur3.chr14 17472038 211 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e manLeu1.NW_012102221v1 2670498 0 - 2847728 C e chlSab2.chr7 134243347 0 + 135778131 C e cerAty1.NW_012001672v1 3283515 0 + 4669795 C e macNem1.NW_012013133v1 24248451 0 - 25927173 C e macFas5.chr5 187867111 0 + 189454096 C e rheMac8.chr5 188919658 0 + 190429646 C a score=11753.000000 s hg38.chr4_KI270789v1_alt 38839 13 + 205944 GGGGATGGTCCCT s panTro5.chr4 192831129 13 + 194502333 GGGGATGGTCCCT i panTro5.chr4 I 150 C 0 s panPan2.chr4 192715722 13 + 195804263 GGGGATGGTCCCT i panPan2.chr4 I 150 C 0 s gorGor5.CYUI01015356v1 3751810 13 + 4876863 GGGGATGGTCCCT i gorGor5.CYUI01015356v1 I 434 C 0 s nomLeu3.chr7b 112637359 13 + 115148730 GGGGATGGTGCCT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 803216 13 + 2368649 GGGGATGGTCGAT i colAng1.NW_012116221v1 C 0 I 162 s mm10.chr8 86514693 9 - 129401213 AGAGAT----CCT i mm10.chr8 C 0 I 1 s canFam3.chr16 16878469 13 - 59632846 GAGGAAAATTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370253 6 - 2520184 GCAGCT------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892634 168 + 3993831 I e micMur3.chr14 17472038 211 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e manLeu1.NW_012102221v1 2670498 0 - 2847728 C e chlSab2.chr7 134243347 0 + 135778131 C e cerAty1.NW_012001672v1 3283515 0 + 4669795 C e macNem1.NW_012013133v1 24248451 0 - 25927173 C e macFas5.chr5 187867111 0 + 189454096 C e rheMac8.chr5 188919658 0 + 190429646 C e otoGar3.GL873580 11189768 0 - 11315646 C a score=4048.000000 s hg38.chr4_KI270789v1_alt 38852 4 + 205944 GCTC s panTro5.chr4 192831142 4 + 194502333 GCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715735 4 + 195804263 GCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3751823 4 + 4876863 GCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637372 4 + 115148730 GCTC i nomLeu3.chr7b C 0 C 0 s mm10.chr8 86514703 4 - 129401213 GCAT i mm10.chr8 I 1 C 0 s dasNov3.JH570353 1370259 2 - 2520184 --TT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892634 168 + 3993831 I e micMur3.chr14 17472038 211 - 93316391 I e canFam3.chr16 16878482 0 - 59632846 C e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 803229 162 + 2368649 I e manLeu1.NW_012102221v1 2670498 0 - 2847728 C e chlSab2.chr7 134243347 0 + 135778131 C e cerAty1.NW_012001672v1 3283515 0 + 4669795 C e macNem1.NW_012013133v1 24248451 0 - 25927173 C e macFas5.chr5 187867111 0 + 189454096 C e rheMac8.chr5 188919658 0 + 190429646 C e otoGar3.GL873580 11189768 0 - 11315646 C a score=289149.000000 s hg38.chr4_KI270789v1_alt 38856 66 + 205944 CATAGAAAGGG---------ACAGGTGCACCAGGACACGGGT--------GGGG-ATGGTCCCTGCTCCTCATGTCTGTGCGAG s panTro5.chr4 192831146 66 + 194502333 CATAGAAAGGG---------ACAGGTGCACCAGGACACGGAT--------GGGG-ATGGTCCCTGCTCCTCATGTCTGTGCGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715739 66 + 195804263 CATAGAAAGGG---------ACAGGTGCACCAGGACACGGAT--------GGGG-ATGGTCCCTGCTCCTCATGTCTGTGCGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3751827 66 + 4876863 CATAGAAAGGG---------ACAGGTGCACCAGGACACGGGT--------GGGG-ATGGTCCCTGCTCCTCATGTCTGTGCGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637376 66 + 115148730 CATAGAAAGGG---------ACAGGTGCACCAGGACACGGGT--------GGGG-ATGGTCCCTGCTCCTCACGTCTGTGCGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919658 66 + 190429646 CATAGAAAGGG---------ACAGGTGCACCAGAACACAGGT--------GGGG-GTGGTCCCTGTTCCTCACGTCTGTGCCGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867111 66 + 189454096 CATAGAAAGGG---------ACAGGTGCACCAGAACACAGGT--------GGGG-GTGGTCCCTGTTCCTCATGTCTGTGCCGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248451 66 - 25927173 CATAGAAAGGG---------ACAGGTGCACCCGAACACAGGT--------GGGG-GTGGTCCCTGTTCCTCATGTCTGTGCCGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283515 66 + 4669795 CATAGAAAGGG---------ACAGGTGCACCAGAACACGGGT--------GGGG-GTGGTCCCTGTTCCTCATGTCTGTGCCGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243347 67 + 135778131 CATAGAAAGGG---------ACAGGTGCACCAGAACACGGGT--------GGGGAATGGTCCCTGTTCCTCATGTCTGTGCAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670498 66 - 2847728 CATAGAAAGGG---------ACAGGTGCACCAGAACACGGGT--------GGGG-GTGGTCCCTGTTCCTCATGTCTGTGCCGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803391 66 + 2368649 CATAGAAAGGG---------ACAGGCGCACCAGAACACGAGT--------GGGG-ATGGTCCCTGTTCTTCACGTCTGTGCAGT i colAng1.NW_012116221v1 I 162 C 0 s otoGar3.GL873580 11189768 39 - 11315646 ---AGAGGGGG---------AC------------ACTTTGCT--------AGGA-A------------CTTGTGTCTGCAAGGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86514707 36 - 129401213 GAAGGTAAGGG---------AATATTGAAC-------------------------AT--------------ACATTTGTGATAG i mm10.chr8 C 0 I 2 s canFam3.chr16 16878482 25 - 59632846 -----------------------------------------------------------TTACTACACTTTGGATTTACATGAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370261 80 - 2520184 --CATAAAGGAAACATATTTACATCTGCATCTACATGCAGCTTTCATAAAAGGA-ACTTTATTTACACCT-GTATCTGCACACA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3892634 168 + 3993831 I e micMur3.chr14 17472038 211 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=2178892.000000 s hg38.chr4_KI270789v1_alt 38922 222 + 205944 GCTTTCATTTGC-AGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAATAAAGAGAAAGGTAGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTCAACTGGGTATTTTAAGGGGAAAATTACATGATTAAA-----TCACACCCATGGAAGTTTGGTTTAGAATTCCATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA s panTro5.chr4 192831212 222 + 194502333 GCTTTCATTTGC-AGGCTTCACGGTGCTTTAGAATAATGTGTTCATGGAATAAAGAGAAAGGTAGCATGGGAGG---AAAATGTTTTCATACAAAGTGAGGAAAT-TAAATATCACTTGATTCAACTGGGTATTTTAAGGGGAAAATTACATGATTAAA-----TCACACCTATGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGGTGAACATTTCCAAGGCCCTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192715805 222 + 195804263 GCTTTCATTTGC-AGGCTTCACGGTGCTTTAGAATAATGTGTTCATGGAATAAAGAGAAAGGTAGCATGGGAGG---AAAATGTTTTCATACAAAGTGAGGAAAT-TAAATATCACTTGATTCAACTGGGTATTTTAAGGGGAAAATTACATGATTAAA-----TCACACCTATGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGGTGAACATTTCCAAGGCCCTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3751893 222 + 4876863 GCTTTCATTTGC-AGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAATAAAGAGAAAGGTAGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTCAACTGGGTATTTTAAGGGGAAAATTACATGATTAAA-----TCACACCCATGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637442 222 + 115148730 GCTTTCATTTGC-GGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAATAAAGAGAAAGGTAGCATCGGAGG---AAAACGTTTTCTTACAAAGCGAGGAAAT-TAAATATCACTTGATTCGACTGGGTATTTTAAGGGGAAAATTACATGATTAAA-----TCGCACCCATGGAAGTTTGGTTTAGAATTCTATTATCTAAGACAGATGAACATTTCCAAGGCCCTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919724 222 + 190429646 GCTTTCATTTGG-GGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAATACAGAGGAAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867177 222 + 189454096 GCTTTCATTTGG-GGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAATACAGAGAAAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248517 222 - 25927173 GCTTTCATTTGG-GGGCTTCACAGTGCTTTAGAATAATGTGTTCATGGAACACAGAGAAAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283581 222 + 4669795 GCTTTCATTTGG-GGACTTCACAGTGCTTTAGAATAATGTGTTCATGGAATACAGAGAAAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAGTATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTGTTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243414 222 + 135778131 GCTTTCATCTGG-GGGCTTTGCAGTGCTTTAGAATCATGTGTTCATGGAATACAGAGATAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTAGACTGGGTATTTTAAGGGAGAAATGACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGTCCTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670564 222 - 2847728 GCTTTCATTTGG-GGACTTCACAGTGCTTTAGAATAATGTGTTCATGGAATACAGAGAAAGGTGGCATGGGAGG---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAGTATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAAA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTGTTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803457 222 + 2368649 GCTTTCATGTGG-GGGCTTTGCAGTGCTTTAGAATAATGTGTTCATGGAATAAAGACAAAGGTGGCATGGGAGA---AAAATGTTTTCATACAAAGCGAGGAAAT-TAAATATCACTTGATTAGACTGGGTATTTTAAGGGGGAAATTACTTGATTAGA-----TTGCACCCCTGGAAGTTTGGTTTAGAATTCTATTATCTAAGATGGATGAACATTTCCAAGGCCCTAAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17472249 219 - 93316391 GCTTTCATTTGGTAGGTTTCAAAGTGCTTTAGAATAATACTTTCATGGGAGAAAGAGAAAGGTAGCATGAAAGG---AAAACATTTTCAT-AAAAGCAAGGAAGTAAAAATGTCACTTGATTCAGCTGGATATTTTAAGGGGAAAATTATATGATTAAA-----TTGTACTGATGGAAGTTTGGTTTAAAATTCCAT----TAAGATGGATGAACATTTCCAAGGCCCTAAA i micMur3.chr14 I 211 I 67 s proCoq1.NW_012145301v1 3892802 218 + 3993831 GCTTTCATTTGGTGGG-TTCAAAGTGCTTTAGAATAATACTTTCATGGAATAAAG-GAAAGGTAACTTGAAAGG---AAAACATTTTCATAAAAAGCAAGGCAGTAAAAATGTCACTTGATTCAGTTGGATATTTTAAGGGGAAAATTATATGATTAAA-----TTGTACCAATGGAAGTTTGGTTTAAAATTCCAT----TAAGATGGATGAACATTTCCAAGGCCCTAAA i proCoq1.NW_012145301v1 I 168 C 0 s otoGar3.GL873580 11189807 217 - 11315646 GCTTTCATTTGGTGAGTTTCAAAGTGCTTTAGAATAATATTTTCATGGCATAAAGAGAATGGTGGCATGAAAAG---AGAATA-GTTCACAAAAAGCAAGGAAATAAAAATGTGACTTGATTCAACTGGATATTTTAAGGGG-AAATTATCTGATTAAA-----ATGTACCATTGGAAGTTTACGTTAAAATT-AAT----TAGGATGGATGAACATTTTCAAGGCTCTAAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86514745 208 - 129401213 GCTTGTATACAA-TGATTTTAAGATGCTTCATAATAATATTCTCATGAAATAAA--TACAGATACCAGAGAAGA---AATATA-TTTCATAAACAACTAGA-----AAAATGTCATTTGATTCAACTATGTATTTCAAGGATAAACTTATAGGATTAGGAGTCTATGTGACAATAGAAATTTGATTTAAAATTTTATTGTCCGAG------------TTCCAGAGTCCTAGT i mm10.chr8 I 2 C 0 s canFam3.chr16 16878507 222 - 59632846 ACTTTTATTTGGTGGATTTCAAAATGCTTAAGGATAGTACTTTTATATAATAAAG-GAAAGGTAGCATGAAAGG---AAAATGTGTTCATAGAAAGTAAATAAAT-AAAATGTCATTTGGTTCACTTGGATATTTTACAGGGAAAATTATATAATTAAC-----TTGTACCAGTAGTAGTTTGATTTAAAATTCCATTACCTAAGATGGATTTACATTTTCAGAGCATTAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370341 220 - 2520184 GCCTTTATTCCATGGATTTCAAA-----TTAGGATATTACTTTTATAAAGTAAAGAAAAAGACAGCATGAAAAGGAAAAAAAAAGTTCA-AAAAAGCAAGGAAAT-AAAATGTCATTTGTATCAATTGGACATTTTAAGAGGAAAATCATATGATTAAA-----TTGTGCCAGTGGAAGTTTGGTTTAAAATTCCATTATTTAAGATGGATGAACATTTCCAAGTCCCTAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=338782.000000 s hg38.chr4_KI270789v1_alt 39144 54 + 205944 CTGTGTATTAGA------------AAGA-AA--TCC-TAATTGCATCAAAATAAATGAAATGTTATATTT s panTro5.chr4 192831434 54 + 194502333 CTGTGTATTAGA------------AAGA-AA--TCC-TAATTGCATCAAAATAAATGAAATGTTATATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716027 54 + 195804263 CTGTGTATTAGA------------AAGA-AA--TCC-TAATTGCATCAAAATAAATGAAATGTTATATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752115 54 + 4876863 CTGTGTATTAGA------------AAGA-AA--TCC-TAATTGCATCAAAATAAATGAAATGTTATATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637664 54 + 115148730 CTGTGTATTAGA------------AAGA-AA--TCC-TAATTGCATCAAAATAAATGAAATGTTATATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188919946 54 + 190429646 CTGTGTATTAG-------------AAGA-AA--ACCTTAATTGCATCAAAAGAAATGAAATGTTATATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867399 54 + 189454096 CTGTGTATTAG-------------AAGA-AA--ACCTTAATTGCATCAAAAGAAATGAAATGTTATATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248739 54 - 25927173 CTGTGTATTAG-------------AAGA-AA--ACCTTAATTGCATCAAAAGAAATGAAATGTTATATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283803 55 + 4669795 CTGTGTATTAGA------------AAGA-AA--ACCTTAATTGCATCAAAAGAAATGAAATGTTATATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243636 53 + 135778131 CTGTGTATTAGA------------AAGA-AA--ACC-TAATTGCATCAAAAGAAATGAAATGTTA-ATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670786 55 - 2847728 CTGTGTATTAGA------------AAGA-AA--ACCTTAATTGCATCAAAAGAAATGAAATGTTATATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803679 52 + 2368649 C--TGTATTAGA------------AAGA-AA--ACC-TAATTGCATCAAAAGAAATGAAATGTTATATTT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3893020 63 + 3993831 TTATGTATTAGGAAAAAAAAATAAAAGA-AA--ACA-TAATTGTATCAAAAGAAATGAA---TTGGTTGT i proCoq1.NW_012145301v1 C 0 I 1 s otoGar3.GL873580 11190024 53 - 11315646 TTGCATATTGGA----------AAAAGA-CA--AAA-TAAATGTAACAGAAGAAATGAA---TTGGATCT i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86514953 55 - 129401213 CAATGTGTTGGG------------CAGG-AAGGGCC-CAACT-TGTCAAAAGTAATGAATGGAGGTCTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16878729 54 - 59632846 TTGTGTGGTAGA------------AAAA-AG--TAA-CAATTGTACGAAAAGGAATGAATGCATACATCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370561 52 - 2520184 CTTTGTGGTAGG------------AAAACAA--AGC-CAATTGTCTAAAAAGGAATGATA---TATATTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e micMur3.chr14 17472468 67 - 93316391 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=554958.000000 s hg38.chr4_KI270789v1_alt 39198 60 + 205944 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTAAAAAAA s panTro5.chr4 192831488 60 + 194502333 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTAAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716081 60 + 195804263 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTTAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752169 59 + 4876863 TTGTTATTAGTTTTTGAGTGCCTTTCAA-CCAGAAGAAAACTAAACTTGATTTAAAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637718 60 + 115148730 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACGAAACTTGATTTAAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188920000 60 + 190429646 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTAAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867453 60 + 189454096 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTTAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248793 60 - 25927173 TTGTTACTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTAAAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283858 60 + 4669795 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATTTAAAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243689 60 + 135778131 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAAGTAAACTTGATTAAAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670841 59 - 2847728 TTGTTATTAGTTTTTGAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGATT-TAAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803731 59 + 2368649 TTGTTATTAGTTTTTAAGTGCCTTTCAACCCAGAAGAAAACTAAACTTGAAA-AAAAAAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17472535 56 - 93316391 TTGTCATTAGTTGTTGGGTGCCTTTTAATCTAGAAAGAGACTAAACTTGATTTAAA---- i micMur3.chr14 I 67 C 0 s proCoq1.NW_012145301v1 3893084 56 + 3993831 TTGTCATTAGTTGTTGGGTGCCTTTTAATCTAGAAAGAGACTAAACCTGATTTAAA---- i proCoq1.NW_012145301v1 I 1 C 0 s otoGar3.GL873580 11190081 59 - 11315646 TTGTCATTAG-CATTAAGTGCCTTTTAATCTAGAAAGAAACTGAACTTGATTAAAAAAAA i otoGar3.GL873580 I 4 I 341 s mm10.chr8 86515008 53 - 129401213 TCAGCCTTTGTTGTTGGACATCTTTTAACCTAGAA----ACTAAATTTGATTTTTTA--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16878783 60 - 59632846 TCGTCATTAGTGATTGGGTGCCTTTTAACCTAGAAAGCAATATATCCTGATTGAAAAACA i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1370613 60 - 2520184 TTATCAATGGTTGTCAGATGTCTTTTAACCTAGAAAGGAATTTAACTTGATTGAATTAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=-41943.000000 s hg38.chr4_KI270789v1_alt 39258 4 + 205944 AAAA- s panTro5.chr4 192831548 4 + 194502333 AAAA- i panTro5.chr4 C 0 I 1 s panPan2.chr4 192716141 4 + 195804263 AAAA- i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3752228 4 + 4876863 AAAC- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637778 3 + 115148730 AAC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188920060 1 + 190429646 C---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187867513 1 + 189454096 C---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24248853 1 - 25927173 C---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3283918 1 + 4669795 C---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134243749 1 + 135778131 C---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2670900 1 - 2847728 C---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 803790 1 + 2368649 C---- i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17472591 3 - 93316391 -AAC- i micMur3.chr14 C 0 I 1 s proCoq1.NW_012145301v1 3893140 3 + 3993831 -AAC- i proCoq1.NW_012145301v1 C 0 I 1 s mm10.chr8 86515061 3 - 129401213 -AAA- i mm10.chr8 C 0 I 1 s canFam3.chr16 16878846 1 - 59632846 A---- i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1370673 4 - 2520184 -TAAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190140 341 - 11315646 I a score=567582.000000 s hg38.chr4_KI270789v1_alt 39262 48 + 205944 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG s panTro5.chr4 192831553 48 + 194502333 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i panTro5.chr4 I 1 C 0 s panPan2.chr4 192716146 48 + 195804263 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3752232 48 + 4876863 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112637781 48 + 115148730 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i nomLeu3.chr7b C 0 I 1278 s rheMac8.chr5 188920061 48 + 190429646 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i rheMac8.chr5 C 0 I 1248 s macFas5.chr5 187867514 48 + 189454096 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i macFas5.chr5 C 0 I 1234 s macNem1.NW_012013133v1 24248854 48 - 25927173 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i macNem1.NW_012013133v1 C 0 I 1228 s cerAty1.NW_012001672v1 3283919 48 + 4669795 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i cerAty1.NW_012001672v1 C 0 I 1253 s chlSab2.chr7 134243750 48 + 135778131 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAATTTGAATAGG i chlSab2.chr7 C 0 I 1306 s manLeu1.NW_012102221v1 2670901 48 - 2847728 AGCTTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i manLeu1.NW_012102221v1 C 0 I 1239 s colAng1.NW_012116221v1 803791 48 + 2368649 AGATTTAT-AACAAGATGTTAGAGGTGATAAATTTAAAGTTTGAATAGG i colAng1.NW_012116221v1 C 0 I 1216 s micMur3.chr14 17472595 48 - 93316391 AGCTTTAT-AACAAGGTATTAGAGATGATAAATTTAAAGTTTGGATAGG i micMur3.chr14 I 1 I 468 s proCoq1.NW_012145301v1 3893144 48 + 3993831 AGCTTTAT-AACAAGGTATTAGAGATGATAAATTTAAAGTTTGGATAGG i proCoq1.NW_012145301v1 I 1 I 472 s otoGar3.GL873580 11190481 48 - 11315646 AGCTTTAT-AAGAAGGTGTTAGAGATGATGAATCTAAAGTTTAGATAGG i otoGar3.GL873580 I 341 I 1 s mm10.chr8 86515065 48 - 129401213 ATCTTTAG-AACAAGATGTTAGAGATAATAAATTTAAACTCTGAGTAGA i mm10.chr8 I 1 C 0 s canFam3.chr16 16878847 46 - 59632846 --CTTTATAAACAAGGTG-GAGTGACTGTAAATTTGAAGTTTGAATAGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1370677 47 - 2520184 AGCTTTAT-AA-AAGGTGTTAGTGATTATAAATTCAAAATTTGAATAGG i dasNov3.JH570353 C 0 I 16698 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=30054.000000 s hg38.chr4_KI270789v1_alt 39310 4 + 205944 AAGA s panTro5.chr4 192831601 4 + 194502333 AAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716194 4 + 195804263 AAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752280 4 + 4876863 AAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639107 4 + 115148730 aaga i nomLeu3.chr7b I 1278 C 0 s rheMac8.chr5 188921357 4 + 190429646 aaga i rheMac8.chr5 I 1248 C 0 s macFas5.chr5 187868796 4 + 189454096 aaga i macFas5.chr5 I 1234 C 0 s macNem1.NW_012013133v1 24250130 4 - 25927173 aaga i macNem1.NW_012013133v1 I 1228 C 0 s cerAty1.NW_012001672v1 3285220 4 + 4669795 aaga i cerAty1.NW_012001672v1 I 1253 C 0 s chlSab2.chr7 134245104 4 + 135778131 aaga i chlSab2.chr7 I 1306 C 0 s manLeu1.NW_012102221v1 2672188 4 - 2847728 aaga i manLeu1.NW_012102221v1 I 1239 C 0 s colAng1.NW_012116221v1 805055 4 + 2368649 aaga i colAng1.NW_012116221v1 I 1216 C 0 s otoGar3.GL873580 11190530 4 - 11315646 AGAA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86515113 4 - 129401213 TAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16878893 4 - 59632846 CAGA i canFam3.chr16 C 0 I 918 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=36547.000000 s hg38.chr4_KI270789v1_alt 39314 8 + 205944 GCA---TGGTC s panTro5.chr4 192831605 8 + 194502333 GCA---TGGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716198 8 + 195804263 GCA---TGGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752284 8 + 4876863 GCA---TGGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639111 11 + 115148730 gcATGGTGGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188921361 8 + 190429646 gcg---tggtc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187868800 8 + 189454096 gcg---tggtc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24250134 8 - 25927173 gcg---tggtc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3285224 8 + 4669795 gcg---tggtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134245108 8 + 135778131 gcG---TGGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2672192 8 - 2847728 gcg---tggtc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 805059 8 + 2368649 gcG---TGATC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11190534 8 - 11315646 TAA---AGCTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86515117 8 - 129401213 ATA---AAGCC i mm10.chr8 C 0 I 2022 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16878897 918 - 59632846 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=54523.000000 s hg38.chr4_KI270789v1_alt 39322 10 + 205944 TGGGACTAGA s panTro5.chr4 192831613 10 + 194502333 TGGGACTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716206 10 + 195804263 TGGGACTAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752292 10 + 4876863 TGGGACTAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639122 10 + 115148730 CGGGACTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188921369 10 + 190429646 cagggcTAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187868808 10 + 189454096 cagggctaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24250142 10 - 25927173 cagggctaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3285232 10 + 4669795 cagggctaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134245116 10 + 135778131 CAGGACTAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2672200 10 - 2847728 cagggctaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 805067 10 + 2368649 CAGGACTAGA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11190542 10 - 11315646 TTGAACTAAA i otoGar3.GL873580 C 0 I 397 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16878897 918 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I a score=467684.000000 s hg38.chr4_KI270789v1_alt 39332 84 + 205944 AAC-ACTGTAGGACAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------CTAttt--ttttttt s panTro5.chr4 192831623 85 + 194502333 AACCACTATAGGAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------CTAttt--ttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716216 85 + 195804263 AACCACTATAGGAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------CTAttt--ttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752302 85 + 4876863 AACCACTATAGGAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------CTAttt--ttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639132 85 + 115148730 AACCATTATAGGAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------Cttttt--ttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188921379 85 + 190429646 AACCActgtaggaaagagatgttccttcccacctatttagttattcatttaatGACAGGCTACAGGTATCAC-------TCAttc--ttttttt i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187868818 85 + 189454096 aaccactgtaggAAAGAGATGTTCCTTCCCACCTATTTAGTTATTCATTTAATGACAGGCTACAGGTATCAC-------TCAttc--ttttttt i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24250152 87 - 25927173 aaccactgtaggAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATTTAATGACAGGCTACAGGTATCAC-------TCAttcttttttttt i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3285242 85 + 4669795 aaccactgtaggAAAGAGATGTTCCTTTCCACCTATTTAGTTACTCATTTAATGACAGGCTACAGGTATCAC-------TCAttc--ttttttt i cerAty1.NW_012001672v1 C 0 I 956 s chlSab2.chr7 134245126 85 + 135778131 AACCACTGTAGGAAAGAGATGTTCCTTTCCACCTATTTAGTTATTCATGTAATAACAGGCTACAGGTATCAC-------tttttt--ttttttt i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012102221v1 2672210 92 - 2847728 aaccactgtaggAAAGAGATGTTCCTTTCCACCTATTTAGTTACTCATTTAATGACAGGCTACAGGTATCACTCAttcttttttt--tttcttt i manLeu1.NW_012102221v1 C 0 I 2 s colAng1.NW_012116221v1 805077 85 + 2368649 AACCACTATAGGAAAGAGACGTTCCTTTCCACCTATTTAGTTATTCATTTAATAACAGGCTACAGGTATCAC-------TCAttc--ttttttt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16878897 918 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1444324.000000 s hg38.chr4_KI270789v1_alt 39416 276 + 205944 tttttttgaaactgagtctcagtctctcgcccaggctggagttcagtggtgcaatctaggctcactgcaacctccacctcctgggttcaagcaattctctgcctc------------agctgggattacaggcgcccgtcaccacacccagctaatttttttgtatttttagtggagacgggttttcaccatcttggccaagctggtcctgaactcctgacctcgtgatccacccgccgcgtcttcccaaagtgctgggattacaggcatgagccaccgctcacggcc s panTro5.chr4 192831708 274 + 194502333 ttttt--gaaactgagtctcagtctctcacccaggctggagttcagtggtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctctgcctc------------agctgggattacaggcgcccgtcaccacacccagctaatttttttgtatttttagtggagatggggtttcaccgtcttggccaagctggtcttgaactcctgacctcgtgatccacccgccgcgtcttcccaaagggctgggattacaggcatgagccactgcgcacggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716301 272 + 195804263 ttt----gaaactgagtctcagtctctcacccaggctggagttcagtggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcaattctctgcctc------------agctgggattacaggcgcccgtcaccacacccagctaatttttttgtatttttagtggagacggggtttcaccatcttggccaagctggtcttgaactcctgacctcgtgatccacccgccgcgtcttcccaaagggctgggattacaggcatgagccactgcgcacggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752387 256 + 4876863 ttt----aa--------------ctctagccca-gctggagttcagtggtgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctctgcctc------------agctgggattacaggcgcccgtcactacacccagctaatttttttgtatttttagtggagacggggtttcaccatcttggccaagctggtcttgaactcctga-ctcgtgatccacccgccgcgtcttcccagagtgctgggattacaggcatgagccaccgcgcacggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639217 286 + 115148730 tgttt--gaaactgagtctcactctctcgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccccctcctggattcaagcaattctctgcctcagcctcccgagtagctgggattacaggtgcccgtcaccacacccagctaatttttttgtatttttagtggagacagggtttctccatcttggccaagctggtcttgaactcctgacgctgtgatccacccgcctcggcttcccaaagtgctgggattacaggcgtgagccaccatgcccggcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188921465 287 + 190429646 tttttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccacctcctgggttcaagcagttctctgcctcagcctccccagtagctgggattacaggcacccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccgtcttggccaagctggtcttgatctcctgacctcgtgatccacctggctcagcctccgaaagtgctgggattacaggcgtgacacaccgcgcccggcc i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187868904 287 + 189454096 tttttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccacctcctgggttcaagcagttctctgcctcagcctccccagtagctgggattacaggcgcccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccgtcttggccaagctggtcttgatctcctgacctcgtgatccacctggctcagcctcccaaagtgctgggattacaggcgtgacacaccgcgcccggcc i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24250240 287 - 25927173 tttttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccacctcctgggttcaagcagttctctgcctcagcctccccagtagctgggattacaggcgcccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccgtcttggccaagctggtcttgatctcctgacctcgtgatccacctggctcagcctcccaaagtgctgggattacaggcgtgacacaccgcgcccggcc i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3286283 287 + 4669795 tttttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccatctcctgggttcaagcaattctctgcctcagcctccccagtagctgggattacaggcgcccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccatcttggccaagctagtcttgaactcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgacacaccgcgcccggcc i cerAty1.NW_012001672v1 I 956 C 0 s chlSab2.chr7 134245213 287 + 135778131 tttttttgagactgagtcttactctgtctcccaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcctgggttcaagcaattctctgcctcaggctccccggtagctgggattacaggtgcccatcaccaca-ccagctaatttttttgtgtttttagtggagatggggttttgccatcttggccaagctggtcttgaactcctgaccttgtgatccacccgcctcagcctcccaaagtgctaggattacaggcgtgagacaccgcgcccggcc i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012102221v1 2672304 287 - 2847728 tttttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccatctcctgggttcaagcaattctctgcctcagcctccccagtagctgggattacaggcgcccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccatcttggccaagctagtcttgaactcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcgtgacacaccgcgcccggcc i manLeu1.NW_012102221v1 I 2 C 0 s colAng1.NW_012116221v1 805162 284 + 2368649 ---ttttgagactgagtcttgctctgtctcccaggctggagtgcagtggcacagtctcggctcactgcaacctccacctgctgcgttcaagcaattctctgcctcagcctcccctgtagctgggattacaggcgcccatcaccaca-ccagctaatttttttgtgtttttagtggagacggggttttgccatcttggccaagctggtcttgaactcgtgacctcgtgatccacccacctcggtctcccaaagtgctggaattacaggcgtgacacaccgcgcccagcT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16878897 918 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3072804.000000 s hg38.chr4_KI270789v1_alt 39692 523 + 205944 CTATCAtccattcttgattgcacatcctcttttggcttccgtgaaagcatactgctatgttttatt-------tctgcctctcttgttacccgccgttatcaatcctaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctctctcatccat-cactaaggttgctagaagatccttgttctcagggtgtcactcacacacatgactctcaaatcaaagtagccagcagaacctccacgctgtgatccaatctagaatttccaagctgtcttctggatatttctttttgaatatttgaACCAACAGTACTGTAC-----TTTAACTCTTCCTCTGCTTTCTTCCCAAGGCTCCTAGCTTCTGTGTTATCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------CGAGTTATTTCACCTAAAACACGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGTACAATGCTATCTCAGAATCATATAGGTATCtttt--t s panTro5.chr4 192831982 521 + 194502333 CTATCATCCATTCTTGATTGCATGCCCTCTTTTGGCTTCCGTGATAGCATACTGCTATGTTTTATT-------TCTGCCTCTCTTGTTACCTGCCGTTATCAATCCTAGGCTCCTTTCTCCCATGCT-CCTGCCTCTATATGGTGTTGCTGAGGTCCACC----TTTCCTCTCTCATCCAT-CACTACGGTTGCTAGAAGATCCTTGTTCTCAGGGTGTCATTCACACAC--GACTCTCAAATCAAAGTAGCCAGCAGGACCTCCACGCTGTGATCCAATCTAGGATTTCCAAGCTGTCTTCTGGATATTTCTTTTTGAATATTTGAACCAACAGTACTGTAC-----TTTAACTCTTCCTCTGCTTTCTTCCCAAGGCTTCTAGCTTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------AGAGTTATTTCACCTAAAACATGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGTACAATGCTATCTCAGAATCATATAGGTATCTTGt--t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192716573 521 + 195804263 CTATCATCCATTCTTGATTGCATGCcctcttttggcttccgtgatagcatactgctatgttttatt-------tctgcctctcttgttacctgccgttatcaatcctaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctctctcatccat-cactacggttgctagaagatccttgttctcagggtgtcattcacacac--gactctcaaatcaaagtagccagcaggacctccacgctgtgatccaatctaggatttccaagctgtcttctggatatttctttttgaatatttgaACCAACAGTACTGTAC-----TTTAACTCTTCCTCTGCTTTCTTCCCAAGGCTTCTAGCTTCTGTGTTACCATTTGTGACTTTTCTATTAAG-AAAAAATCTGTTA--------AGAGTTATTTCACCTAAAACATGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGTACAATGCTATCTCAGAATCATATAGGTATCTTGt--t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3752643 521 + 4876863 CTATCAtccattcttgattgcacgtcctcttttggcttccgtgaaagcatactgctatgttttatt-------tctgcctctc-tgttacccgccgttatcaatcctaggctcctttctcccatgctccctgcctctatatggtgttgctgaggtccacc----tttcctctctcatccat-cactacggttgctagaagatccttgttctcagggtgtcattcacacacatgactctcaaatcaaagcagccagcaggacctccacgctgtgatccaatctaggatttccaagctgtcttctggatatttctttttgaatatttgaACCAACAGT-CTGTAC-----TTTAACTCTTCCTCTGCTTTCTTCCCAAGGCTTCTAGCTTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------CGAGTTATCTCACCTAAAACACGGCACATTATTATTTTTAAATTTGTAATAATTGTGTCTGTAGTCTT--AAAGTACAATGCTATCTCAGAATCATATAGGTATCTTGt--t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112639503 523 + 115148730 CTCTCATCCATTCTTGATTGCAGGCcctcttttggcttccttgaaagcatactgctatgttttatt-------tctgcctgtcttgttacccgctgttatcaatcctaggctcctttctcctatgct-cctgcctctatatggtgttgctgaggtccacc-----ttcctctgtcatccat-cactacagttgcaagaagatccctgttctcagggtgacattcacacacatgactctcaaatcaaagtagccagcaggacctccacgctgtgatccaatctagaatttccaagctgtcttctggacatttcgctttgaatatttgaACCAACAGTACTGTAC-----TTTAACTCTTCCCTTCCTTTCTTCCCAAGGCTTCTAGCTTCTGTGTTACGATTTGTGACTTTTCCATTAAGAAAAAAATCTGTTA--------AGAGTTATTTCACCTAAAACACAGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGTACAATGCTAACTCAGAATCATACAGGTATCtttt--t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188921752 523 + 190429646 CTATCATCCATTCTTGATTGCAGGTCCTGTTGtggcttccgtgaaaacatactgctgtgttttatt-------tctgcctctcttgttacccaccgttaccaatcccaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctcgctcatccat-cactacagttgctagaagattcctgttctcagggtgacattcacacgcatgactctcaaatcaaagtagccagcaggacctccatgctgtgatcagatctagaatttccaagctgtcttctggacatttctttttgaatatttgaACCAACAGTTCTGTAC-----TTTGACCATTCCCCTCCTTCCTTCCCAAGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------AGAGTTATTTCACCTAAAACAAGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGCACAATGCTAACTCAGAATCATATAGGTATCTTTT--t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187869191 523 + 189454096 CTATCATCCATTCTTGATTGCAGGTCCTGTTGtggcttccgtgaaaacatactgctgtgttttatt-------tctgcctctcttgttacccaccgttatcaatcccaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctcgctcatccat-cactacagttgctagaagattcctgttcttagggtgacattcacacgcatgactctcaaatcaaagtagccagcaggacctccatgctgtgatcagatctagaatttccaagctgtcttctggacatttctttttgaatatttgaACCAACAGTTCTGTAC-----TTTGACCATTCCCCTCCTTCCTTCCCAAGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------AGAGTTATTTTACCTAAAACAAGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGCACAATGCTAACTCAGAATCATATAGGTATCTTTT--t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24250527 523 - 25927173 CTATCATCCATTCTTGATTGCAGGTCCTGTTGtggcttccgtgaaaacatactgctgtgttttatt-------tctgcctctcttgttacccaccgttatcaatcccaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctcgctcatccgt-cactacagttgctagaagattcctgttctcagggtgacattcacacgcatgactctcaaatcaaagtagccagcaggacctccatgctgtgatcagatctagaatttccaagctgtcttctggacatttctttttgaatatttgaACCAACAGTTCTGTAC-----TTTGACCATTCCCCTCCTTCCTTCCCAAGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTGTTA--------AGAGTTATTTCACCTAAAACAAGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGCACAATGCTAACTCAGAATCATATAGGTATCTTTT--t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3286570 520 + 4669795 CTATCATCCATTCTT-ATTGCAGGTCCTATTCtggcttctgtgaaagcatactgctgtgttttatt-------tctgcctctcttgttacccaccgttatcaatcccaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctcgctcatccat-cactacagttgctagaagatccctgttctcagggtgacattcacacgcatgactctcaaatcaaagtagccagcaggacctgcatgctgtgatcagatctagaatttccaagctgtcttctggacatttctttttgaatatATGAACCAACAGTTCTGTAC-----TTTAACCATTCCCCTCCTTTCTTCCCAAGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTATT----------GAGCTATTTCACCTAAAACATGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGCACAATGCTAACTCAGAATCATATAGGTATCtttt--t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134245500 522 + 135778131 CTATCATCCATTCTTGATTGCAAGTCCTGTTCTGGCTTCCGTGAAAGCATACTGCTGTGTTTTATT-------TCTGCCTCTCTTGTTACCCACCGTTTTCAGTCCCAGGCTCCTTTCTCCCATGCT-CCTGCCTCTATATGGTGTTGCTGAGGTCCACC----TTTCCTCGCTCATCCAT-CACTACAGTTGCTAGAAGATCCCTGTTCTCAGGGTGACATTCACACGCATGACTCTCAAATCAGAGTAGCCAGCAGGACCTCCATGCTGTGATCAAATCTAGAATTTCCAAGCTGTCTTCTGGACATTTCTTTTTGAATATTTGAACCAACAGTACTGTAC-----TTTAACCATTCACCTCCTTTCTTCCCAAGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCTATTAAGAAAAAAATCTGTT----------GAGTTATTTCACCTAAAACATGGCACATTATTATTTTTTAATTTGTAGTAATTGTGTCTGTAGTCTT-AAAAGTACAATGCTAACTCAGAATCATATAGGTGTCTCtt--t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2672591 520 - 2847728 CTATCATCCATTCTT-ATTGCAGGTCCTATTCtggcttctgtgaaagcatactgctgtgttttatt-------tctgcctctcttgttacccaccgttatcaatcccaggctcctttctcccatgct-cctgcctctatatggtgttgctgaggtccacc----tttcctcgctcatccat-cactacagttgctagaagatccctgttttcagggtgacattcacacgcatgactctcaaatcaaagtagccagcaggacctgcatgctgtgatcagatctagaatttccaagctgtcttctggacatttctttttgaatatATGAACCAACAGTTCTGTAC-----TTTAACCATTCGCCTCCTTTCTTCCCAGGGCTTCTAGAGTCTGTGTTACCATTTGTGACTTTTCCATTAAG-AAAAAATCTATT----------GAGTTATTTCACCTAAAACATGGCACATTATTATTTTTTAATTTGTAATAATTGTGTCTGTAGTCTT-AAAAGCACAATGCTAACTCAGAATCATATAGGTATCtttt--t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 805446 521 + 2368649 CTATCATCCATTCTTGATTGCAGGTCATGTTCTGGCTTCCGTGAAAGCATACTGCTGTGTTTTATT-------TCTGCCTCTCTTGTTACCCACCGTTATCAATCCCAGGCTCCTTTCTCCCATGCT-CCTGCCTCCATATGGTGTTGCTGA-GTCCACC----TTTCCTCGCTCATCCAT-CACTACAGTCGCTAGAAGATCCCTGTTCTCAGGGTGACATTCACACACATGACTCTCAAATCAAAGTAGCCAGCAGGACCTCCATGCTGTGATTCAGTCTAGAGTTTCCAAGCTGTCTTCTGGACATTTCTTTTTGAATATTTGAACCAACAGTACTGCAC-----TTTAACCATTCCACTCCTTTCTTCCCAAGGCTTCTAGAGTCTGTGTTACTGTTTGTGACTTTTCCATTAAGAAAAAAATCTGTT------------GTTATTTCACCTAAAACACAGCACATTATTATTTTTTAATTTGTAATAATTATGTCTGTAGTCTT-AAAAGTACAGTGCTAACTCAGAAGCATATAGGTATCTCtttgt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16879815 518 - 59632846 CTATCATCCATTCTTCATTGCAGCTTCTCTTTTGGCTTTCATAATGCCACACTGTCGTGTATTTTTTTCCCCCTTTGCTTCTCTTGTTACTCCCTTCTATCA----TAGGCTCCTTGTCCTCACATT-TTTACTTCTCTCTGGTGCTTTAAGGATATATCTGATTTTCCTCATTTATATATGAACTACAGTTAC------AT-----------GGGTGATATCCACACAC--AATTCCTAAATCATAGTGGCCAGTGGGACTTCAATCTTGTGACCTAGACTAGCACTT-CAAGTTGCCTTCTGGCCATTTCTTCTTGAATA--TGAACTAACAGTTCTCTACATGATGTTAACTGATCCCATCGTTTC-TACCAAGGCTTCTAGGAGCTGTGTTACCATTTGTG---TTTCTACTTTG-AAAATATCTTTAAAATACTTTAGAGTTATTTTACCTAAAGCACAGCAAATTCTTA-TTTAAAAAATGTAACAAGTATACATATGACCTTAAAAAGTACAATGTCAATTTATAatcatatggatatcctgt--t i canFam3.chr16 I 918 I 126 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=5637262.000000 s hg38.chr4_KI270789v1_alt 40215 1056 + 205944 tt----------tt------tctttttt---ttt------gagatggagtcatgctctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaaccttctactctctggttcaagcgattctcctgcctcagcctgccaagtagctggga-ttacaggcacacatgccaccacgcccagctaatttctgtatttttaatagagacggggtttcaccatgttggccaggatggtgtcaatctcctgacctagtgattcacctg-ctgggcctccccaaagtgctgggattacaggcatgagccactgtgcccagctgggatctcgttaaagacacagaccccaattaagatt-ggggaatcagagcctttggagacttgggaactcg---tgctgtactcatgacttcacgtggttctcatacacactaaggtgagagaaccaTAACCCTG-------GACAGCAGAGAGGATACTTTTTGTTAATTAAATGCCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTGTTTGCAAAACCCAGGAAGGCATTTTATCAATAGCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTGCTCTTTCGGTTTAAAGCAAATGAACCAACTCTGACTAGATTTAAACAAAAAGCGAATCTAAGCGAACCTATTGGGAGAACACTA-GGTTATCTCATGGAG----ATGTGGTAAAGTAGAGAATAGGGAGGGACTAGATCAACTCCAGGTACCTTGGCAGTGAAACCTCGTGGATCTTCTCGCCACTGAATTTCCTTCAGTTGGACTTTGGCTCCTGTCACTTGCAACCTGTACTTCCACCCCTGCTCCCAAATTTAATTTTATTTTTTAAAAttgcttttaaatgacatgtaataattgtacatatttcggaatacaaagagatatttccatacatggatgtaatgtataattaccatattgtggtaattagcatatctatcatgtataacacaaagaatttatcatttctttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatacacaataaatt s panTro5.chr4 192832503 1066 + 194502333 ttgttttgtttttt------tctttttt---ttt------gagatggagtcatgctctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaaccttctactctctggttcaagcgattctcctgcctcagcctgccaagtagctggga-ttacaggcacacatgccaccatgcccagctaatttctgtatttttaatagagacggggtttcaccatgttggccaggatggtgtcaatctcctgacctagtgattcgcctg-ctcggcctctccaaagtgctgggattacaggcatgagccactgtgcccagctgggatcttgttgaagacacagaccccaattaagatt-ggggaatcagagcctttggaggcttgggaactcg---tgctgtacccattacttcacgtggttctcatacacacgaaggtgagagaaccaTAATCCTG-------GACAGCAGAGAGGATACTTTTTGTTAATTAAATGCCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTGTTTGCAAAACCCAGGAAGGCATTTTATCAATAGCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTGCTCTTTTGGTTTAAAGCAAATGAACCAACTCTGACTAGATTAAAACAAAAAGCGAATCTAAGCGAACCTATTGGGAGAACACTA-GGTTATCTCATGGAG----ATGTGGTAAAGTAGAGAATAGGGAGGGACTGGATCAACTCCAGGTACCTTGGCAGTGAAACCTCGTGGATCTTCTCGCCACTGAATTTCCTTCAGTTGGACTTTGGCTCCTGTCACTTGCAACCTGTACTTCCACCCCTGCTCCCAAATTTAATTTTATTTTTTAAAATTGCttttaaatgacatgtaataatcgtacatatttcggaatacaaagagatatttccatacatggatgtaatgtataattaccgtattgtggtaattagcgtatctatcatgtataacacaaagaatttatcatttctttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatacacaataaatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192717094 1062 + 195804263 ttgttttt----tt------ttcttttt---ttt------gaaatggagtcatgctctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaaccttctactctctggttcaagcgattctcctgcctcagcctgccaagtagctggga-ttacaggcacacatgccaccatgcccagctaatttctgtatttttaatagagacggggtttcaccatgttggccaggatggtgtcaatctcctgacctagtgattcgcctg-ctcggcctctccaaagtgctgggattacaggcatgagccactgtgcccagctgggatcttgttgaagacacagaccccaattaagatt-ggggaatcagagcctttggaggcttgggaactcg---tgctgtacccattacttcacgtggttctcatacacacgaaggtgagagaaccaTAATCCTG-------GACAGCAGAGAGGATACTTTTTGTTAATTAAATGCCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTGTTTGCAAAACCCAGGAAGGCATTTTATCAATAGCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGtattttagttgctcttttggtttaaagcaaatgaaccaactctgactagattaaaacaaaaagcgaatctaagcgaacctattgggagaacacta-ggttatctcatggaG----ATGTGGTAAAGTAGAGAATAGGGAGGGACTGGATCAACTCCAGGTACCTTGGCAGTGAAACCTCGTGGATCTTCTCGCCACTGAATTTCCTTCAGTTGGACTTTGGCTCCTGTCACTTGCAACCTGTACTTCCACCCCTGCTCCCAAATTTAATTTTATTTTTTAAAAttgcttttaaatgacatgtaataatcgtacatatttcggaatacaaagagatatttccatacatggatgtaatgtataattaccgtattgtggtaattagcgtatctatcatgtataacacaaagaatttatcatttctttgggttgggaatattcaaaatcctcttttctagctatttgaaaatacacaataaatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3753164 1065 + 4876863 ttgttttgtttttt------cttttttt---ttt------gagatggagtcatgctctgttgcccaggctggagtgcagtggcacaatctctgctcactgcaaccttctactctctagttcaagcaactctcctgcctcagcctgccaagtagctggga-ttacaggcacacatgccaccacgcccagctaatttctgcatttttaatagagatggggtttcaccatgttggccaggatggtgtcaatctcctgacctagtgattcgcctg-ctcggcctccccaaagtgctgggattacaggcacgagccactgtg-ccAGctgggatcttgttgaagacacagaccccaattaagatt-ggggaatcagagcctttggaggcttgggaactcg---tgctgtacccattacttcacgtggttctcatacacacaaaggtgagagaaccaTAATCCTG-------GACAGCAGAGAGGATACTTTTTGTTAATTAAATGCCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTGTTTGCAAAACCCAGGAAGGCATTTTATCAATAGCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTA-Tttagttgctcttttggtttaaagcaaatgaaccaactc-gactagatttaaacaaaaagtgaatctaagcgaacctatt-ggagaacacta-ggttatctcatggaGATGTATGTGGTAAAGTAGAGAATAGAGAGGGACTGGATCAACTCCAGGTACCTTGGCAGTGAAACCTCGTGGATCTTCTCGCCACTGAATTTCCTTCACTTGGACTTTGGCTCCTGTCACTTGCAACCTGTACTTCCACCCCTGCTCCCAAATTTAATTTAATTTTTTTAAAttgcttttaaatgacatgtaataattgtacatattttggaatacaaagagatatttccatacatggatgtaatgtataattaccatattgtggtaattagcgtatctatcatgtataacacaaagaatttatcatttctttgttttgggaatattcaaaatcctc-tttctagctatttgaaaatacacaataaatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112640026 1071 + 115148730 ctttc-------tt------tctttttt---tttgggggggggatggaatcatgctctgttgctcaggctggagtgcagtggcactatctcggctcactgcaaccttctacttcctggttcaagcgcttctcctgcctcagcttcccaagtagctagga-ttacaggcacacacgccaccatgcccagctaatttctgtatttttagtagagatgagatttcgccatgttggccaggatggtgtcgatctcctgacctagtgattcgcccgccttggcctccccaaagtgctgggattacaggcgtgagccactgcgcccag-tgggatcttgttaaagacacag-ccccgcttaagatc-agggaatcagaggctttgggggcttgggaactcg---tgctgtacccattacttcacgtagttctcatatacgctaaggtgagagaaccaTAATCCTGGACAGCAGACAGCAGACAGGATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTCTTTGCAAAACCCAGGAAGGCATTTTATCAATAGCTACTATTCATTTTCAGTTTGCTTCGTTCCAACTTGCTGTGtattttagttgctcttttggtttaaagcaaaagaaccagctctgactaggtttaaacaaaaagcgaatctaagcgaacctattgagagaacacta-ggttatgtcacggaG----ATGTGGTAAAGTAGAGAATAGGGAGGGACTGGATCAACTCCAGGTACCTGGGCAGTGAAACCTCGTGGATCTTCTCGCCACTGAATTTTCTTCAGCTGGACTTTAGCTCCTGTCACTTGCAACCTGTACTTCCACCCCTGCTCCCAAATTTAATTTAATTTTTTAAAAttacttttaaatgacatgtaataattgtacatatttcggaataccaagtgatatttccatacatggatataatgtataattaccgtattgtggtaattcgcgtatctatcatgtataacacaaagaatttatcatttctttgtgttgggaatgttcaaaatcctcttttctagctatttgaaaatacacaataaagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188922275 1069 + 190429646 tttgttttttttttttttgatttttgtt---ttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcgtgatctcggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgtgatttacaggcacccatgccaccatgcccagctaatatctgtatttccagtagagacagggtttcaccatgttggccaggatggtgttgatctcctgacctaatgatttgcccacctcggcctccccagagtgctgggattacaggcatgagccaccgagcccagctgggatcttgttaaagacacagaccccacttaagatc-agggaatcagagcctttggaggcttgggaacccg---tgctttacccatcacttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGGATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAAAGTCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTGCTTTTGGTTTAAAGCAAAAGAACCAACTCTGACTAGATTTAAACAAAAAGCGAATCTGAGTGAACCTGTTGAAAGAACACTA-AGCTCTCTCACAGAG----ATGTGGTAAAATAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGCATATCTTCATGGATCCTCTTGCCACTGAATTTCCTTCCGTGGGACTTCAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTATTTTTAAAAATCatttttaattgacatgtaattattgtgcatatttcagaataaaaagtgatatttccatacatggatatgatgtataattatcatattatggtaattagcatatctagcatctgtgacacaaagaatttatca----tttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatatacaataaatt i rheMac8.chr5 C 0 I 2106 s macFas5.chr5 187869714 1069 + 189454096 tttgttttttttttttttgatttttgtt---ttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcgtgatctcggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgtgatttacaggcacccatgccaccatgcccagctaatatctgtatttccagtagagacagggtttcaccatgttggccaggatggtgttgatctcctgacctagtgatttgcccacctcggcctccccagagtgctgggattacaggcatgagccaccgagcccagctgggatcttgttaaagacacagaccccacttaagatc-ggggaatcagagcctttggaggcttgggaacccg---tgctttacccatcacttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGGATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAAAGTCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTGCTTTTGGTTTAAAGCAAAAGAACCAACTCTGACTAGATTTAAACAAAAAGCGAATCTGAGTGAACCTGTTGAAAGAACACTA-AGCTCTCTCACAGAG----ATGTGGTAAAATAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGCGAATCTTCATGGATCCTCTCGCCACTGAATTTCCTTCCGTGGGACTTCAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTATTTTTAAAAATCatttttaattgacatgtaattattgtgcatatttcagaataaaaagtgatatttccatacatggatatgatgtataattatcatattatggtaattagcatatctagcatctgtgacacaaagaatttatca----tttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatatacaataaatt i macFas5.chr5 C 0 I 2103 s macNem1.NW_012013133v1 24251050 1069 - 25927173 tttgttttttttttttttgatttttgtt---ttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcgtgatctcggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgtgatttacaggcacccatgccaccatgcccagctaatatctgtatttccagtagagactgggtttcaccatgttggccaggatggtgttgatctcctgacctaatgatttgcccacctcggcctccccagagtgctgggattacaggcatgagccaccgagcccagctgggatcttgttaaagacacagaccccacttaagatc-ggggaatcagagcctttggaggcttgggaacccg---tgctttacccatcacttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGGATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAAAGTCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTGCTTTTGGTTTAAAGCAAAAGAACCAACTCTGACTAGATTTAAACAAAAAGCGAATCTGAGTGAACCTGTTGAAAGAACACTA-AGCTCTCTCACAGAG----ATGTGGTAAAATAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGTGAATCTTCATGGATCCTTTCGCCACTGAATTTCCTTCCGTGGGACTTCAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTATTTTTAAAAATCatttttaattgacatgtaattattgtgcatatttcagaataaaaagtgatatttccatacatggatatgatgtataattatcatattatggtaattagcatatctagcatctgtgacacaaagaatttatca----tttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatatacaataaatt i macNem1.NW_012013133v1 C 0 I 2110 s cerAty1.NW_012001672v1 3287090 1066 + 4669795 tttgtttttttttttgtt--tttttg-t---ttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcgcgatctcggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgcgatttacagacacccatgccaccatgcccagctaatatctgtatttttagtagagacagggtttcaccatgttggccaggatggtgttgatctcctgacctagtgatttgcccacctcggcctccccagagtgctgggattacaggcatgagccaccaagcccagctgggatcttgttaaagacacagaccccacttaagatc-ggggaatcagagcctttggaggcttgggagcccg---tgctttacccatcagttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGCATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAAAGTCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTGCTTTTGGTTTAAAGCAAAAGAACCAACTCTGACTAGATTTAAACAAACAGCTAATCTGGGTGAACCTGTTGAAAGAACACTA-AGCTCTCTCACGGAG----ATGTGGTAAAATAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGCAAATCTTCATGGATCCTCTCGCCACTGAATTTCCTTCTGTGGGACTTCAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTATTTTTAAAAATCatttttaattgacatgtaattattgtgcatatttcagaataaaaagtgatatttccatacatggatatgatgtataattatcatattatggtaattagcatatctagcatctgtgacacaaagaatttatca----tttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatatacaataaatt i cerAty1.NW_012001672v1 C 0 I 2143 s chlSab2.chr7 134246022 1067 + 135778131 ttgtttttgttttttgt---tttttgtt---ttt------gagatggagtcttgctctgtcac-caggctggagtgcagtggcgtgatcttggctcactgcaaccttctactacctggttcaagcgattctcctgcctcagcctcccaagtagctgtgatttacaggcacccatgccaccacgctcagctaatttctgtatttgtagtagagacggggtttcaccatgttggccaggatggtgtcgatctcctgacctagtgattcacccacctcggcctccccaaagtgctgggattacaggcatgagccactgcgcccagctgggatcttgttaaagacacagaccccacttaagatcaggggaatcagagcctttggaggcttgggaaccca---tgctttacccatcagttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGCATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAATATCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTGTTTTAGTTTTTCTTTTGATTTGAAGCAAAAGAACCAACTCTGACTAAATTTAAACCAAAAGCTAATCTGAGTGAACCTGTTGAAGGAACACTA-GGCTCTCTCATGGAG----ATGTGGTAAAGTAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGTGAATCTTCATGGATCCTCTCGCCACTGAATTTCCTTCCGTGGGACTTTAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTTGTTATATTTTTAAAAAttatttttaattgacatgtaataattgtgcgtatttcagaatacaaagtgatatttccatacatggatataatgtataattatcatattatggtaattagcatatctagcatctgtaacacaaagaatttatca----tttgtgttgggaattttcaaaatcctcttttctagctatttgaaaatatacaataaatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2673111 1066 - 2847728 tttgtttttttttttgt---ttttttgt---ttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcgtgatctcggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgcgatttacagacacccatgccaccatgcccagctaatatctgtatttttagtagagacagggtttcaccatgttggccaggatggtgttgatctcctgacctagtgatttgcccacctcggcctccccagagtgctgggattacaggcatgagccaccaagcccagctgggatcttgttaaagacacagaccccacttaagatc-ggggaatcagagcctttggaggcttgggaacccg---tgctttacccatcagttcacgtggttctcatatacactaaagtgagagaaccaTAATCCTG-------GGCAGCAGAGAGCATACTTTTTGTTAATTAAATACCACACTTTATTTCAAGATATTAGATTAGGTATTATTGACAGCTGTTTGCGAAACCCAGGAAGGCATTTTACCAAAGTCTACTATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTGCTTTTGGTTTAAAGCAAAAGAACCAACTCTGACTAGATTTAAACAAACAGCTAATCTGGGTGAACCTATTGAAAGAACACTA-AGCTCTCTCACGGAG----ATGTGGTAAAATAGAGAAGCAGGAGGGACTGGAGCAACTCCAGGTGCCTTGGCAGCAAATCTTCATGGATCCTCTCGCCACTGAATTTTCTTCCGTGGGACTTCAGCTCCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTATTTTTAAAGATCattttcaattgacatgtaattattgtgcatatttcagaataaaaagtgatatttccatacatggatatgatgtataattatcatattatggtaattagcatatctagcatctgtgacacaaagaatttatca----tttgtgttgggaatattcaaaatcctcttttctagctatttgaaaatatacaataaatt i manLeu1.NW_012102221v1 C 0 I 2120 s colAng1.NW_012116221v1 805967 1075 + 2368649 tttgtttgtttgtttgtt--tgtttgcttgcttt------gagatggagtcttgctctgtcgc-caggctggagtgcagtggcatgatcttggctcactgcaaccttctactccctggttcaagcgattctcctgcctcagcctcccaagtagctgcaatttacaggcacccatgccaccacgcccagctaatttgtgtatttttagtagagacgggatttcaccatgttggccaggatggtgtcgatctcctaaactagtgattagtccacctcggcctccccagagtgctgggattacaggcatgagccactgcgcccagctgggatcttgttaaagacacagaccccacttaagatcaggggaatcagagcctttggaggcctgggaacccgtgctgctttacccatcacttcacgtggttctcatatacactaaagtgagaggaccaTAATCCTG-------GGCAGCAGAGAGGATACTTTTTGTTAATTAGATACCACACTTCATTTCAAGATGTTAGATTAGGTATTACTGACAGCTATTTGCAAAACCCAGGAAGGCATTTTATCAATATCTACCATTCATTTTCAGTTTGCTTCATTCCAACTTGCTGTGTATTTTAGTTTTTCTTTTGTTTTGAAGCAAAGGAACCAGCTCTGACTAGATGTAAACAAAAAGCTAATCTGGGTGAACCTGTTGAAGGAACACTAGGGCTATCTCACAGCG----ATGTGGTAAAGCAGAGAAGCCGGAGGGACTGGAGCAGCTCCAGGTGCCTTGGCAGCACGTCGTCACGGGTCCTCTCGCCACTGAATTCCCTTCCGTGGGACTTTAGCTGCAGTCACTTGCAACCTGTATTTCCACCCCCGCTCTCAAATTTAGTTGTGATTTTTAAAAttatttttaattgacatgtaataattgtgcatatttcagaatacaaagtgatatttccatacatggatataatgtataattatcatattatgataattagcatatctagcatctgtaacac----aatttatcatttctttgtgttgggaatattcagaatcctcttttctagctatttgaaaatatacaataaatt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2750409.000000 s hg38.chr4_KI270789v1_alt 41271 1591 + 205944 attgttaactatcatcacccttacagggctatagaaactagagctgactcctatccagttgtaattttgtat------------ctctccttatccttctctcctcctatagtctccaactgacagtaaccataactctactctctgcttctagagctcaatgttttagctcccatacatgggtgagaacatgcggtatttatctttttgtgtctgacttatttcatttaacataatgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgacagaatagtatatcattgtgtgtagttaccacactttatccactcatctgatgatagactcttaggctgactccatatcttggctattgtggatagtgcttcagtagacatgggagtgcagatatctctttgagatactgattttctttcttttggatgaatagcgagtagagggattgctagatcatatggtagttctattcttagtttttcgaggaaactccatacggtttttcataatggccatactaatttacaatcccaccaacagtatgtaggagctcccttttctctgcatcctcaccagcatctgttatttttgtcttgttgatagtagccattttaactgggacaagagaatatctcattgtggttttgatttgcatttccataatgattagtgacgtcattttttaaaatgttctttttgcccatttgtatgtccttttttgagaaatgtctttcagattctttggccactgtaaaatcagatttt-tttttgctttttt-atttttttgctgttgtttgaattccttgtatattctgagcattaatctcttgttggatgaatagttcgcaaatattttctcccatcctaaa-gtggtctttctattctgttgattacttcctttgctgtgcataaggtttttagtttgatatagtctcatttgtctatttttacgtttgttgcttgtacttgtaaagtcttacctataaaagcttcacccagtctcaagtcctaaagtgtttcccccatgttgtcttctaggaattgtatagttttgggtcttaaacttaagtctttaatccattttgaatttattttcatgtatggtgtgagagagagagagagaggtctagatttattcttctgcatatgcatatccacttttcaacgtttttggtgactttgtcaaaaagtcaggtgactgtaaataagagaatttatttatgggttttctagtctgttccattggtttatgtgtctgcttttataccagtgtcatgctgttttgattactagagctttgtagtatattttgaggacaggtagtataatacttccagctttgttctttgtgcttagaattgcattagctattcagggtattttgtggttccatacaagatttggaatattttttctatttctgtgaggaatatcattggtattttgatagtgaaaccagtccagtagtcccatagatagctttttttt----ggataaacatagaatttgatccttctgttcttaaagcttgaagcttgcatttgttttatctgtgttccttcctcagg-atgacattcagggc s panTro5.chr4 192833569 1591 + 194502333 attgttaactatcatcacccttacagggccatagaaactagagttgactcctatccagttgtaattttgtat------------ctctccttatccttctctcctcctatagtctcgaactgacagtaaccataactctactctctgcttctagagctcaatgttttagctcccatacatgggtgagaacatgcagtatttatctttttgtgtctgacttatttcatttaacataatgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgacagaatagtatatcattgtgtgtagttaccacactttatccactcacctgatgatagactcttaggctgactccatatcttggctattgtggatagtgcttcagtagacatgggagtgcagatacctctttgagatactgattttctttcttttggatgaatagcgagtagagggattgctagatcatatggtagttctattcttagtttttcgaggaaactccatacggtttttcataatggccatactaatttacaatcccaccaacagtatgtaggagctcccttttctctgcatcctcaccagtgtctgttatttttgtcttgttgatagtagccattttaactgggacaagagaatatctcattgtggttttgatttgcatttccataatgattagtgatgtcattttttaaaatgttctttttgcccatttgtatgtccttttttgagaaatgtctttcagattctttggccactgtaaaatcagatttt-tttttgcttttta-atttttttgctgttgtttgaattccttgtatattctgagcattaatctcttgttggatgaatagttcacaaatattttctcccatcctaca-gtggtctt-ctattctgttgattacttcatttgctgtgcataaggtttttagtttgatatagtctcatttgtctattcttacgtttgttgcttgtacttgtaaagtcttacctacaaaagcttcaccccgtctcaagtcctaaagtgtttcccccatgttgtcttctaggaattgtatagttttgggtcttaaacttaagtctttaatccattttgaatttattttcatgtatggtgtgagagagagagagag--gtctagatttattcttctgcatatgcatatccacttttcaacgtttttggtgactttgtcaaaaagtcaggtgactgtaaataagagaatttatttctgggttttctagtctgttccattggtttatgtgtctgcttttataccagtgtcatgttgttttgattactagagctttgtagtatattttgaggacaggtagtataatatttccagctttgttctttttgcttagaattgcattagctattcagggtattttgtggttccatacaagatttggaatattttttctatttctgtgaggaatatcattggtattttcatagtgaaaccagtccagtagtcccatagatagtttttttttttttggataaacatagaatttgatcct-ctgttcttaaagcttgaagcttgcttttgttttatctgtgttccttcctcagg-atgacattcagggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192718156 1588 + 195804263 attgttaactatcatcacccttacagggccatagaaactagagttgactcctatccagttgtaattttgtat------------ctctccttatccttctctcctcctatagtctcgaactgacagtaaccataactctactctctgcttctagagctcaatgttttagctcccatacatgggtgagaacatgcagtatttatctttttgtgtctgacttatttcatttaacataatgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgacagaatagtatatcattgtgtgtagttaccacactttatccactcacctgatgatagactcttaggctgactccatatcttggctattgtggatagtgcttcagtagacatgggagtgcagatatctctttgagatactgattttctttcttttggatgaatagcgagtagagggattgctagatcatatggtagttctattcttagtttttcgaggaaactccatacggtttttcataatggccatactaatttacaatcccaccaacagtatgtaggagctcccttttctctgcatcctcaccagtgtctgttatttttgtcttgttgatagtagccattttaactgggacaagagaatatctcattgtggttttgatttgcatttccataatgattagtgatgtcattttttaaaatgttctttttgcccatttgtatgtccttttttgagaaatgtctttcagattctttggccactgtaaaatcaga-ttt-tttttgcttttta-atttttttgctgttgtttgaattccttgtatattctgagcattaatctcttgttggatgaatagttcacaaatattttctcccatcctaca-gtggtctt-ctattctgttgattacttcatttgctgtgcataaggtttttagtttgatatagtctcatttgtctattcttacgtttgttgcttgtacttgtaaagtcttacctataaaagcttcaccccgtctcaagtcctaaagtgtttcccccatgttgtcttctaggaattgtatagttttgggtcttaaacttaagtctttaatccattttgaatttattttcatgtatggtgtgagagagagagagag--gtctagatttattcttctgcatatgcatatccacttttcaacgtttttggtgactttgtcaaaaagtcaggtgactgtaaataagagaatttatttctgggttttctagtctgttccattggtttatgtgtctgcttttataccagtgtcatgttgttttgattactagagctttgtagtatattttgaggacaggtagtatgatatttccagctttgttctttttgcttagaattgcattagctattcagggtattttgtggttccatacaagatttggaatattttttctatttctgtgaggaatatcattggtattttcatagtgaaaccagtccagtagtcccatagatagttttttttt--ttggataaacatagaatttgatcct-ctgttcttaaagcttgaagcttgcttttgttttatctgtgttccttcctcagg-atgacattcagggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3754229 1582 + 4876863 attgttaactatcatcacccttacagggctatagaaactagagctgactcctatccagttgtaattttgtat------------ctctccttat-cttgtctcctcctatagtctccaactgacagtaaccataactctactctctgcttctagagctcaatgttttagctcccatacatgggtgagaacatgcgatatttatctttttgtgtctgacttatttcatttaacataatgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgacagaatagtatatcattgtgtgtagttaccacactttatccattcatctgatgatagactcttaggctgactccatatcttggctattgtggatagtgcttcagtagacatgggagtgcagatatctctttgagatactga-tttctttcttttggatgaatagcgagtagagggattgccagatcatatggtagttctattcttagtttttcgaggaaactccatacagtttttcataatggccatactaatttacaatcccaccaacagtatgtaggagctcccttttctctgcatcctcaccagcatctgttatttttgtcttgttgatagtagccattttaactgggataggagaatatctcattgtggttttgatttgcatttccataatgattagtgacgtcatttttaaaaatgttctttttgcccatttgtatgtccttttctgagaaatgtctttcagattctttggccactgtaaaatcata-ttt-tttttgcttttt--atttttttgctgttgtttgaattccttgtatattctgagcattaatctcttgttggatgaatagttcgcaaatattttctcccatcctaca-gtggtctttctattctgttgattacttcctttgctgtgcataaggtttttagtttgatatagtctcatttgtctatttttacgtttgttgcttgtacttgtaaagtcttacctataaaagcttcacccagtctcaagtcctaaagtg-ttcccctatgttgtcttctaggaattgtatagttttgggtcttaaacttaagtctttaatccattttgaatttattttcatgtatggtgtgtgagagagagagag--gtctagatttattcttctgcatatgcatatccacttttcaacgtttttggtgactttgtc-aaaagtcaggtgactgtaaataagagaatttatttctgggttttctagtctgttccattggtttatgtgtctgcttttataccagtgtcatgctgttttgattactagagctttgtagtatattttgaggacaggtagtataatacttccagctttgttctttttgcttagaattgcattagctattcagggtattttgtggttccatacaagatttggaatattttttctatttctgtgaggaatatcattggtattttgatagtgaaaccagtccagtagtcccatagatagtttttttt-----ggataaacatagaatttgatccttctgttcttaaagcttgaagcttgcatttgttttatctgcgttccttcctcagg-atgacattcagggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112641097 1585 + 115148730 attgttaactatcatcacccttacagggctatagaaactagagctgactcatatctagttgtaattttgtat------------ctctccttatccttctctcctcctatagtctccaactgatagtaaccataattctactctctgcttctagagctcaatgttttagctcccatatatgggtgagaacatgtggtatttatctttttgtgcctgacttatttcatttaacatattgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgactgaatagtatatcattgtgtgtagttatcacactttatccattcatctgatgatagactcttaggctgactccatatcttggctattgtggatagtgcttcagtagacatgagagtgcagatatctctttgagatactgattttctttcttttggatgaatagccagtagagggattcctagatcatatggtagttctattcgtagttttttgaggaaactccatacagtttttcataatggccatacgaatctacaatcccaccaacagtatgtaggagcttccttttctctgcatcctcaccagcatctgtgatttttgtcttgttgatagtagccattttaactgggataagagaatatctcattgtggttttgatttgcatttccataacgattagtgacgtcatttttaaaaatgttctttttgcccatttgtatgtccttttttgagaaatgtctttcagattctttggccactgtaaaatcagattttgtttttgcttttttgttttttttgctgttgtttgaattccttgtatattctgagcattaatctcttgttggatgaatagtttgcaaatattttctcccatcctaca-gtggtctttctattctgttgattacttcctttgctgtgcataaggtttttagtttgatatagtctcatttgtctatttttacttttgttgcttgtacttgtaaagtcttacctataaaatcttcactcagtctcaagttctaaagtgtttcccccatgttgtcttctaggaattgtatagtttggggacttaaacttaagtctttaatccattttgaatttatttttatgtatggt----gagagagagagag--gtctagatttattcttctgcatatgcatatccacttctcaatgtttttggtgactttgtcaaaaagtcaggtgactgtaaataagagaatttatttctggggtttctagtctgttccattggtttatgtgtctgcttttataccagtgtcatgctgttttgattactagagctttgtagtatattttgagaacaggtattataatacttccagctttgttcttttt-cttagaattgcgttagctattcggggtattttgtggctccatacaagatttagaatattttttctatttctgtgaggaatatcattggtattttgatagtgaaaccagtccagtagtcccatagatagtttttttt------gataaacatagaatttgatccttctgttcttaaagcttgaagcttgcatttgttttatctgtgttccttcctcaggaatgacattcagggc i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134247089 1584 + 135778131 at---------tcatcacccttacagtgctatagaaactagagctgactcctatctagctgtaattttgtatatgtttaccagcctctccttatccttctctcctcctatagtctccaactgatagtaaccataattctactctctgcttctagagctcaatgttttagctcccatatatgggtgagaacctgtggtatttatctttttgtgtctgacttatttcatttaacataatgtcctccaggctcatccttgttgctgtgagtgacaagacttcattcttttttatgactgaatagtctatcattgtgcgtagttaccacactttatccattcatttgatgatacacttttaggctgactccatatcttggctgttgtggatagtgcttcagtagacatgggagtacagatctctctttgagatactgattttctttcttatggatgaatagccagtagagggattgctagatcatatggtagttctattcttagttttttgaggaaactccatacggttttccataatggccatactaatttacaatcccaccaacagtatgtaggagctcccttttctctgcatcttcaccagcatctgctatttttgtctttttgatagtaactattttaactgggataagagaatatctcattgtggtttcgatttgcatttccataatgattagtgatgttaatttcttaaatgttctttttgcccatttgtacgtccctttttgagaaatgtctttcagattttttgaccactgtaaaatcaga-tct-ttttgacttttta-attctgttgctgttgtttgaattcctggtatattctgagcattaatcttttgttggatgaatagtttgcaaatattttctcccatcctacaggttgtctttctattctgttgattacttcttttgctgtacataagatttttagttcgatataatctcatttgtctatttttatttttgtgacttgtacttgtaaagtcgtacctataaaatcttcacccagtctcatatcctgaagtgtttcccccatgttttcttctaggagttgtatagttttgggtgttaaacttaagtctgtaatccattttgaatttatttttatgtatggt--------ggtggggag--gtctagatttattcttttgcacatgaatatccacttttcgacatttttggtgactttgtaaaaaagtcgggtgacagtaaataagggaatttatttctgggttttttagtctgttccattggtttgtgtgtctgcttttataccagtgtcatggtgttttgattactagagctttgtaatatattttgaggacaggtggtataatacttccagctttgtgccttttgcttagaattgtgttagctcttcagggtattttgtggttccatacaagttttagaatattttttctatttctgtgaggaatattattggtattttgatacagaaaccagtccaacagtctcacagatagtttatttc-----agataagcatagaatttgatccttctgttcttaaagcttaaagcttgcatttgtttcatctgtgttccttcctcaggaatgacattcagggc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 807042 1577 + 2368649 attgttaactatcatcactcttacagtgctatagaaactagagctgactcctatctagctgtaattttgtatctgttaatcagcttctccttatccttatctcctcctatagtctccaaccgacagtaaccgtaattcta--ctctgcttctagagctcagtgtttc-gctcccatatatgagggagaacatgcggtatttatcttttcatgtctgacttacttcatttcacataatgtcctccaggctcgtcatcgttgttgtgagtgacaagactccattcttttttatgactgaatagtatatcattgtgcgtagtta----actgtatccattcatttgatgatacacttttaggctgactccatatcttggctgttgtagatagtgcttcaatagacatgcgagtgcagatatctctttgagatgctgattttctttctttgggatgaatagccagtagaggggttgccagatcatatggtagttctattcttagttttttgagggaactccatgcggttttccataatggccatactaatttacactcccaccaacagtatgtaggagctcccttttctctgcatcttcaccagcatctattagttttgtctttttgatagtagtcattttaactgggataagagaataatatctcgtggttttgatttgcatttccgtaacgatcagtgatgtcaattttttaaatgttctttttgccaatttgtacgtccctttttgagaaatgtctttcagattttttgaccactgtaaaatcaga-ttg-ttttggcttttta-gtttttttgctgttgtttgaattccttgtatattctgagcattaaacttttgttggatgaatagtttgcaaatattttcttccatcctacaggttgtcttcctattctgttgattacttcttttgctgtacataagatttttggtttgatataatctcatttgtctatttttatttttgttgcttgtacttgtaaagtcttacctataaaatcttcacccagtctcatgtcctgaagtgtttcccccatgttttcttctaggaattgtatagttttgggtcttaaacttaagtctgtaatccattttgaatttatttttatgtatggt--------ga-gggggt--gtctagattttttcttctgcacatggatatccacttttcgacatttttggtgactttgtaaaaaactcaggtgacagtaaataagggaatttatttctgttgtttttagtctgtttcattggtttatgtgtctgctttgatactagtatcgtggtgttttgattactagagctttgtagtatattttgaggacaggtagtataatacttccagctttgttccttttgcttagaattgtgttagctattcagggtattttatggttccatacaagttttagaata----ttctatttctgtgaagaatattattggtattttgatagagaaaccagtccaacagtctc----atagtttgtttc-----agataagcatagaatttgatccttctgttcttaaagcttgaagcttgcgtttgttttatctgtgttccttcctcaggaatgacattcagggc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e macFas5.chr5 187870783 2103 + 189454096 I e rheMac8.chr5 188923344 2106 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=14675.000000 s hg38.chr4_KI270789v1_alt 42862 11 + 205944 tctcaaaaaaa s panTro5.chr4 192835160 11 + 194502333 tctcaaaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192719744 11 + 195804263 tctcaaaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3755811 11 + 4876863 tctcaaaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s chlSab2.chr7 134248673 11 + 135778131 tctcaagaaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 808619 11 + 2368649 tctcaaaaaaa i colAng1.NW_012116221v1 C 0 I 1989 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e macFas5.chr5 187870783 2103 + 189454096 I e rheMac8.chr5 188923344 2106 + 190429646 I e nomLeu3.chr7b 112642682 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=8882.000000 s hg38.chr4_KI270789v1_alt 42873 10 + 205944 gtatcaaaga s panTro5.chr4 192835171 10 + 194502333 gtatcaaaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192719755 10 + 195804263 gtatcaaaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3755822 10 + 4876863 gtatcaaaga i gorGor5.CYUI01015356v1 C 0 C 0 s chlSab2.chr7 134248684 10 + 135778131 gtatcgaaga i chlSab2.chr7 C 0 I 625 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e macFas5.chr5 187870783 2103 + 189454096 I e rheMac8.chr5 188923344 2106 + 190429646 I e nomLeu3.chr7b 112642682 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=146099.000000 s hg38.chr4_KI270789v1_alt 42883 278 + 205944 ggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggcgaggtggcgggtgcccatagtcccagctactcaggaggctgaggcaggagaatggcgaaaacccggggggggggagcctgcagtgagcagagatcgcaccactgcactccagcctgggtgacagagtgagactccg s panTro5.chr4 192835181 277 + 194502333 ggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacgtggtgaaaccccatctccactaaaaatacaaaaaattagctgggcgaggtggcgggtgcccgtagtcccagctactcaggaggctgaggcaggagaatggcgtaaacccggggggcgg-agcctgcagtaagcagagatcgcaccactgcactccagcctgggcgacagagtgagactccg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192719765 277 + 195804263 ggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacgtggtgaaaccccatctccactaaaaatacaaaaaattagctgggcgaggtggcgggtgcccgtagtcccagctactcaggaggctgaggcaggagaatggcgtaaacccggggggcgg-agcctgcagtaagcagagatcgcaccactgcactccagcctgggcgacagagtgagactccg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3755832 276 + 4876863 ggccgggcgtcgtggctcacg-ctgtaatcccagcactttaggaggccgaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaattagcccggcgaggtggcgggtgcccttagtcccagctactcgggaggctgaggcagaagaatggtgtaaacccgggcggcgg-agcctgcagtgagcacagatcgcaccactgcactccagcctgggtgacagagtgaggctccg i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e chlSab2.chr7 134248694 625 + 135778131 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e macFas5.chr5 187870783 2103 + 189454096 I e rheMac8.chr5 188923344 2106 + 190429646 I e nomLeu3.chr7b 112642682 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=299315.000000 s hg38.chr4_KI270789v1_alt 43161 340 + 205944 tctcaaaaaaa-----------gtatcaaagaactgaaactcacctgatcaccacatccagacaatgagat-gccaaacccctcattcatcatgattactttcttgctcctccctagttcctcccttttcttagacattgtcacatttcttccctgctatataaaccactagttatagccagtcagggaaatggatttgatactaatctcccatctcctttgctgcagcactccgttaaatccttcttccttggcaatactcattgtttcagtgactggctttctgtgtggcaagcagcaggacctagactgaacccctgtgctttggtagcaacaggaattgcactaaatc s panTro5.chr4 192835458 351 + 194502333 tctcaaaaaaaaaaaaaaacaagcatcaaagaactgaaactcacctgatcaccacatccagacaatgagat-gccaaacccctcattcatcatgattactttcttgctcctccctagttcctcccttttcttagacattgtcacatttcttccctgctatataaaccactagttatagccagtcagggaaatggatttgatgctaatctcccatctcctttgctgcagcactcagttaaatccttcttccttggcaatactcattgtttcagtgactggctttctgtgtggcaagcagcaggacctagactgaacccctgtgctttggtaacaacaggaattgcactaaatc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192720042 350 + 195804263 tctcaaaaaaa-aaaaaaacaagcatcaaagaactgaaactcacctgatcaccacatccagacaatgagat-gccaaacccctcattcatcatgattactttcttgctcctccctagttcctcccttttcttagacattgtcacatttcttccctgctatataaaccactagttatagccagtcagggaaatggatttgatgctaatctcccatctcctttgctgcagcactcagttaaatccttcttccttggcaatactcattgtttcagtgactggctttctgtgtggcaagcagcaggacctagactgaacccctgtgctttggtaacaacaggaattgcactaaatc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3756108 349 + 4876863 tctcaaaaaaa--aaaaaaaaagtatcaaagaactgaaactcacctgatcaccacatccagacaatgagacggccaaacccctcattcatcatgattactttctttctcctccctagttcctcccttttcttggacattgtcacatttcttccctgctatataaaccactagttacagccagtcagggaaatggatttgatactaatctcccatctcctttgctgcagcactcagttaaat-cttcttccttggcaatactcattgtttcagtgactggctttctgtgtggcaagcagcgggacctagactgaacccctgtgctttggtaacaacaggaattgcactaaatc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112642682 340 + 115148730 tctcaagaaaa-----------gtattagagaactgaaactcacctgatcaccacatccagacagtgagat-gccaaatccctcattcatcatgattactttcttgcccctccctacttcctcacttttcttagacattgtcacatttcttccctgctctataaaccactagttatagccagtcagggaaatggatttgaggctaatctctcatctcctttgctgcagcactcagttaaagccttcttccttggcaatactcattgtctcagtgattggctttctgtgtggcaagcagcagaacctagactgaacccctgtgctttggtaacagtaggaattgcactaaatc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e chlSab2.chr7 134248694 625 + 135778131 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e macFas5.chr5 187870783 2103 + 189454096 I e rheMac8.chr5 188923344 2106 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=4968.000000 s hg38.chr4_KI270789v1_alt 43501 5 + 205944 tgtag s panTro5.chr4 192835809 5 + 194502333 tgtag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192720392 5 + 195804263 tgtag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3756457 5 + 4876863 tgtag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112643022 5 + 115148730 tatag i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187872886 5 + 189454096 tatat i macFas5.chr5 I 2103 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e manLeu1.NW_012102221v1 2674177 2120 - 2847728 I e chlSab2.chr7 134248694 625 + 135778131 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e macNem1.NW_012013133v1 24252119 2110 - 25927173 I e rheMac8.chr5 188923344 2106 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=12690.000000 s hg38.chr4_KI270789v1_alt 43506 3 + 205944 ctt s panTro5.chr4 192835814 3 + 194502333 ctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192720397 3 + 195804263 ctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3756462 3 + 4876863 ctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112643027 3 + 115148730 ctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188925450 3 + 190429646 ctt i rheMac8.chr5 I 2106 C 0 s macFas5.chr5 187872891 3 + 189454096 ctt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24254229 3 - 25927173 ctt i macNem1.NW_012013133v1 I 2110 C 0 s chlSab2.chr7 134249319 3 + 135778131 ctt i chlSab2.chr7 I 625 C 0 s manLeu1.NW_012102221v1 2676297 3 - 2847728 ctt i manLeu1.NW_012102221v1 I 2120 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e cerAty1.NW_012001672v1 3288156 2143 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=5475962.000000 s hg38.chr4_KI270789v1_alt 43509 1202 + 205944 gctttgattaagatggtcattttaacaatattgactgttccaatctgaacatggaatttttc-ttttttggtgggtgtgtccttttcaatttttctca----tcggtgttttgtagttttcattgtagaggtcttttatctccttggttaaatttatttctaggtactttattttttt----gtagctattaaaaatgggattgcttttttgatttcttcagctagtttgttattggtatatagacttgctattaattcttatatgttgattttatattctgcaactttaccaaattcactgatcagttccaagaattctgtggtgaagtctttaggtttttctctatataagattatgtcatctgcaaagagggacaatttgattttctcttttccaattttgctgtattgtattgctttctcttgcttaactgccctggctaggaattccagtacagtgttgaataagagtagtgaaaatgggcgttcttgtctggttccagctcctagaggaaaagtttttccccattcagtatgctgtcagctgtgggtttgttacatacggcctttattattttgaggtacactccttccatgcctaatttattgagaa-ttttttgtcatgaagggatgttgagttttatcaggtgctttttctgtatctattgagatgatcctatggcttttgcccttaattccgttgatgtgatgtatcacatttattgatttgggtataccaaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgttagattcagtttgctggtattttgttcaggatttttgcatttaggtgcatcagggatactgatctgtagttttgtcgctattgcttttgtgtcctggtctggtttgggtagcagagtaatgctggtctgctagaagaagtttggaaatgatcccttctcttcca-tttttttgaagagcttgtgtcaaattggtattag---ttctttaaatctttgggagaattcagcagtggagccaccaggtcctgggcttttctttgatgggagactttttatgatggcttcaatcatattgcccattattggtttgttgagg-ttttctttttcttcatggtttcatgttggtaggttgtatgtgtgcagggatttattcatttcttctagtttttcctatttgctggtggata s panTro5.chr4 192835817 1204 + 194502333 gctttgattaagatggtcattttaacaatattgactgttccaatctgaacatggaatttttc-ttttttggtgggtatgtcctcttcaatttttctca----tcggtgttttgtagttttcattgtagaggtcttttatctccttggttaaatttatttctaggtgctttattttttt--ttgtagctattaaaaatgggattgcttttttgatttcttcagctagtttgttattggtatatagacttcctattaattcttatatgttgattttatattctgcaactttaccaaattcattgatcagttccaagagttctgtggtgaagtctttaggtttttctctatataagattatgtcatctgcaaagagggacaatttgattttctcttttccaattttactgtattgtattgctttctcttgcttaactgccctggctaggaattccagtacagtgttgaataagagtagtgaaaatgggcgttcttgtctggttccagctcctagaggaaaagtttttccccattcagtatgctgtcagctgtgggtttgttacatatggcctttattattttgaggtacactccttccatgcctaatttattgagaa-tttttcatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgacatgatcctatggcttttgcccttaattccgttgatgtgatgtatcacatttattgatttgggtataccaaaacatccttgtgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgttagattcagtttgctggtattttgttcaggatttttgcatttaggtgcatcagggatactgatctgtagttttgtcactattgcttttgtgttctggtctggtttgggtagcagagtaacgctggtctgctagaataagtttggaaatgatcccttctcttcca-tttttttgaagagcttgtgtcaaattgatattag---ttctttaaatctttggtagaattcagcagtggagccaccaggtcctgggcttttctttgatgggagactttttatgatggcttcaatcatattgcccattattggtttgttgagg-ttttctttttcttcatggtttcatgttggtaggttgtatgtgtgcagggatttattcatttcttctagtttttcctatttgctggtggata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192720400 1203 + 195804263 gctttgattaagatggtcattttaacaatattgactgttccaatctgaacatggaatttttc--tttttggtgggtatgtcctcttcaatttttctca----tcggtgttttgtagttttcattgtagaggtcttttatctccttggttaaatttatttctaggtgctttattttttt--ttgtagctattaaaaatgggattgcttttttgatttcttcagctagtttgttattggtatatagacttcctattaattcttatatgttgattttatattctgcaactttaccaaattcattgatcagttccaagagttctgtggtgaagtctttaggtttttctctatataagattatgtcatctgcaaagagggacaatttgattttctcttttccaattttactgtattgtattgctttctcttgcttaactgccctggctaggaattccagtacagtgttgaataagagtagtgaaaatgggcgttcttgtctggttccagctcctagaggaaaagtttttccccattcagtatgctgtcagctgtgggtttgttacatatggcctttattattttgaggtacactccttccatgcctaatttattgagaa-tttttcatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgacatgatcctatggcttttgcccttaattccgttgatgtgatgtatcacatttattgatttgggtataccaaaacatccttgtgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgttagattcagtttgctggtattttgttcaggatttttgcatttaggtgcatcagggatactgatctgtagttttgtcactattgcttttgtgttctggtctggtttgggtagcagagtaacgctggtctgctagaataagtttggaaatgatcccttctcttcca-tttttttgaagagcttgtgtcaaattgatattag---ttctttaaatctttggtagaattcagcagtggagccaccaggtcctgggcttttctttgatgggagactttttatgatggcttcaatcatattgcccattattggtttgttgagg-ttttctttttcttcatggtttcatgttggtaggttgtatgtgtgcagggatttattcatttcttctagtttttcctatttgctggtggata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3756465 1195 + 4876863 gctttgatt-agatggtcattttaacaatattgactgttccaatctgaacatggaatttttc--tttttggcgggtgtgtcctcttcaatttttctca----tcggtg-tttgtagttttcattgtagaggtcttttacctccttggttaaatttatttctaggtactttatttttt-----gtagctattaaaaatgggattgcttttttgatttcttcagctagtttgttatttgtatatagacttgctattaattcttatatgttgattttatattctgcaactttaccaaattcattggtcagttccaagagttctgtggtgaagtctttaggtttttctctgtataagattatgtcatctgcaaagagggacaatttgattttctcttttccaatttcgctgtattgtattgctttctcttgcttaactgccctggctaggaattccagtacagtgttgaataagagtagtgaaaatgggcgttcttgactggttccagctcctagaggaaaagtttttccccattcagtatgctgtcagctgtgggtttgttacatacggcctttattattttgaggtacactcctcccatgcctaatttattgagaa-ttttttgtcatgaagggatgttgagttttatcaggtgctttctctgcatctattgagatgatcctatggcttttgcccttaattccgttgatgtgatgtatcacatttattgatttgggtataccaaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgttagattcagtttgctggtattttgttcagga-ttttgcatttaggtgcatcagggatactgatctgtagttttgtcgctgttgcttttgtgtcctggtctggtttgggtagcagagtaatgctggtctgctagaataagtttggaaatgatcccttctcttcca-tttttttgaagagcttgtgtcaaattgatattag---ttctttaaatcttt-gtagaattcagcagtggagccaccaggtcctgggcttttctttgatgggagac-ttttatgatggcttcaatcatattgcccattattggtttgttgagg-ttttctttttcttcatggtttcgtgttgataggttgtatgtgtgcagggatttattcatttcttctagtttttcctatttgctggtggata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112643030 1206 + 115148730 gctttgattaagatggtcattttaacaatattgactgttccaatctgaacatggaatttttctttttctggtgggtgtgtcctcttcaatttatctca----tcagtgttttgtagttttcattgtagaggtcttttatctccttggttaaatttatttctaggtactttattttttt----gtagctattaaaaatgggattgcttttttgatttcttcagctagtttgttattggtatatagacttgctattaattcttatgtgttgattttatattctgcaactttaccaaattcattgatcagttctaagagttctgtggtgaagtctttaggtttttctctatataagattatgttatctgcaaagagggacaatttgattttctcttttccaattttgctgtattgtgttgctttctcttgcttaactgccctggctaggaattccagtacagtgttgaataagagtagtgaaaacgggcgttcttgtctggttccagttcctagaggaaaagcttttccccattcagtatgctgtcagctgtgggtttgttacatatggcctttattatgttgaggtacactccttccatgcctaatttattgagag-ttttttgtcatgaagggatgttgagttttatcaggtgctttttccacatctattgagatgatcctatggcttttgcccttatttctgttgatgtgatgtatcacatttattgatttgggtataccaaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgttagattcagtttgctggtattttgctcaggatttttgcatttaggtgcatcagggataccgacctatagttttgtcactgttgttgttgggtcctggtctggtttgggtagcagagtaatgctggccttctagaataagtttagaaatgatcccttctctccta-tttttttgaagagctggtgtcaaattgatattagttcttctttaaatctttggtagaattcagcagtgaagccaccaggtcctgggcttttctttgatgggagactttttatgatggcttcaatcatattgcccattattggtttgttgagg-ttttctttttcttcatggtttcgtgttggtaggttgtatgtgtccaggaacttattcatttcttctagtttttcctatttgctggtggata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188925453 1210 + 190429646 gctttgattaagatggtcattttaacgatattgactgtcccaatctgaacatggaagttttctttttttggtgggtgtgtcgtcttcaatttatctca----ttggtgttttgtagttttcatcgtagaggtcttttatctccttggttaagtttatttctacgtactttattttattttttgtcactattataaatgggattgcttttttgatttcttcagctagtttgttattcgtatatagacttgctattagttcttatatgttgattttatattctgcaactttaccaaacttatcgatcagttccaagagttctgtggtgaagtctctaggtttttctctatataagattacgttatctgcaaagagggacaatttcattttctgttttccaattttgctgtattgtatttctttgtcttgcttaactgccggggctagaaattccagtacagtgttaaataagagtattgaaaatggacattcttgtctggttccagttcctaaaggaaaaggttttccccattcagtatgctgtcagctgtgcatttgttacat--ggcctttagtatgttgaggtacactccttctatgtctaatttattgagagtttttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctgttgagatgattctctggcttttgaccttaattctgttgatatgatgtatcacatttattgatttggatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtatcatttttttgatgtgctgttagattcagtgtgctggtattttgttcaggatttttgcatttgtgtgcatcagggatactgacctgcagttttgtcgctgttgttgttgtgtcctgacctggtttgggtagctgagtaatgctgactttctagaataagtttggaaaagttcctttcccttcca-tttttttgaagcgcttgtgtcaaattgatgttagttcttctttaaatctttggtagaattcagcagtggagcccccaggtcccgggcttttctttgatgggagacttttgatgatggcttcagtcatattgcccattattggtttgctgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctggtggatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187872894 1209 + 189454096 gctttgattaagatggtcattttaacgatattgactgtcccaatctgaacatggaagttttctttttttggtgggtgtgtcgtcttcaatttatctca----ttggtgttttgtagttttcatcgtagaggtcttttatctccttggttaagtttatttctacgtactttattttattttttgtcactattataaatgggattgcctttttgatttcttcagctagtttgttattcgtatatagacttgctattagttcttatacgttgattttatattctgcaactttaccaaacttatcgatcagttccaagagttctgtggtgaagtctctaggtttttctctatataagattacgttatctgcaaagagggacaatttcattttctgttttccaattttgctgtattgtatttctttgtcttgcttaactgccggggctagaaattccagtacagtgttaaataagagtattgaaaatggacattcttgtctggttccagttcctaaaggaaaaggttttccccattcagtatgctgtcagctgtgcatttgttacat--ggcctttagtatgttgaggtacactccttctatgtctaatttattgagag-ttttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgagatgattctctggcttttgaccttaattctgttgatatgatgtatcacatttattgatttggatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtatcatttttttgatgtgctgttagattcagtgtgctggtattttgttcaggatttttgcatttgtgtgcatcagggatactgacctgcagttttgtcgctgttgttgttgtgtcctgacctggtttgggtagctgagtaatgctgactttctagaataagtttggaaaagttcctttcccttcca-tttttttgaagagcttgtgtcaaattgatgttagttcttctttaaatctttggtagaattcagcagtggagcccccaggtcccgggcttttctttgatgggagacttttgatgatggcttcagtcatattgcccattattggtttgctgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctggtggatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24254232 1209 - 25927173 gctttgattaagatggtcattttaacaatattgactgtcccaatctgaacatggaatttttctttttttggtgggtgtgtcgtcttcaatttatctca----ttggtgttttgtagttttcatcgtagaggtcttttatctccttggttaagtttatttctacgtactttattttattttttgtcactattataaatgggattgcttttttgatttcttcagctagtttgttattcgtatatagacttgctattagttcttatatgttgattttatattctgcaactttaccaaactcatcgatcagttccaagagttctgtggtgaagtctctaggtttttctctatataagattacgttatctgcaaagagggacaatttcattttctgttttccaattttgctgtattgtatttctttgtcttgcttaactgccggggctagaaattccagtacagtgttaaataagagtattgaaaatggacattcttgtctggttccagttcctaaaggaaaaggttttccccattcagtatgctgtcagctgtgcgtttgttacat--ggcctttagtatgttgaggtacactccttctatgcctaatttattgagag--tttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgagatgattctctggcttttgaccttaattctgttgatatgatgtatcacatttattgatttggatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtatcatttttttgatgtgctgttagattcagtttgctggtattttgttcaggatttttccatttgtgtgcatcagggatactgacctgcagttttgtcgctgttgttgttgtgtcctgacctggtttgggtagctgagtaatgctgactttctagaataagtttggaaaagttcctttcccttccattttttttgaagagcttgtgtcaaattgatgttagttcttctttaaatctttggtagaattcagcagtggagcccccaggtctcgggcttttctttgatgggagacttttgatgatggcttcagtcatattgcccattattggtttgctgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctggtggatg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3290299 1203 + 4669795 gctttgattaagatggtcattttaacaatattgactgtcccaatctgaacatggaatttttctttttttggtgggtgtgtcgtcttcagtttatctca----ttggtgttttgtagttttcatcgtagaggtcttttatcaccttggttaagtttatttctacgtactttattttattttttgtcactattataaatgggattgcttttttgatttcttcagctagtttgttattcgtatatagacttgctattagttcttatacgttgattttatattctgcaactttaccaaactcatcgatcagttccaagagttctgtggtgaagtctctaggtttttctctatataagatt--gtcatctgcaaagagggacaatttcattttctgttttccaattttgctgtattgtatttctttgtcttgcttaactgcccaggctagaaattccagtacagtgttaaataagagtattgaaaatgggcattcttgtctggttccagttcctagaggaaaaggttttccccattcagtatgctgtcggctgtgcgtttgttacat--ggcctttagtatgttgaggtacactccttctatgcctaatttattgagag--tttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgagatgattctctggcttttgcccttaattctgttgatatgatgtatcatatttattgatttggatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtatatcatttttttaatgtgctgttagattcagtttgctggtattttgttcaggatttttgcatttgtgtgcatcagggatactgacctgcagttttgtcac---tgttgttgtatcctgacctggtttgggtagctgagtaatgctggccttctagaataagtttggaaaagttcccttcccttcca-tttttttgaagagcttgtgtcaaattggtgttagttcttctttaaatctttggtagaattcagcagtggagcccccaggtcccgggcttttctttgatgggagactttggatgatggcttcagtcatattgcccattattggtttgctgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctggtggatg i cerAty1.NW_012001672v1 I 2143 C 0 s chlSab2.chr7 134249322 1177 + 135778131 gctttggttaagatggtcattttaacaatattgactgtcccaatctgaacatagaatttttctttttttggtgggtgtgtcgtcttcaatttatctcattggttggtgttttgtagttttcattgtagaggtcttttatctccttggttaaatttatttctaggtactttattttattttttgtcgctattataaatgggattgcttttttgatttcttcagctagtttgttattcgtatatagacttgctattagttcttatacattgattttatattctgcaactttaccaaattcatcgatcagttccaagagttctgtggtgaagtctttaggtttttctctatatgggattatgtcatctgcaaagagggacaatttcattttctgttttccaatttttctgtattgtatttctttgtcttgcttaactgcccgggc---------------------aaataagagtattgaaaatgggcattcttgtctggttccagttcctagaggaaaaggttttccccattgagtatgctttcagctgtgagtttgttacat--ggccttt---------------actccttctatgcctaatttattgagag--tttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgagatgattctctggcttttgctcttaattctgttgatatgatgtatgacatatattgatttgaatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtataatttttttgatgtgctgtcagattcagtttgctggtattttgttcagaatttttgcctttgtgtgcatcagggatactgacctgcagtttcgtcgctgctgctgttgtgttctgacctggtttgggtagctgagtaatgctgggcttctagaataagtttggagaagttcccttcccttccattgtttatgaagagcttctgtcaaactgatattagttcttctttaaatctttggtagaattcagcggtggagccaccaggtcccgggcttttctttgatgggagacttttgatgatggcttcagtcatattgcccgttattggtttgttgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctgatggatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2676300 1203 - 2847728 gctttgattaagatggtcattttaacaatgttgactgtcccaatctgaagatggaatttttctttttttggtgggtgtgtcgtcttcagtttatctca----ttggtgttttgtagttttcatcgtagaggtcttttatcaccttggttaagtttatttctacgtactttattttattttttgtcactattataaatgggattgcttttttgat---ttcagctagtttgttattcgtatgtagacttgctattagttcttatacgttgattttatattctgcaactttaccaaactcatcgatcagttccaagagttctgtggtgaagtctctaggtttttctctatataagat--tgtcatctgcaaagagggacaatttcattttctgttttccaattttgctgtattgtttttctttgtcttgcttaactgccggggctagaaattccagtacagtgttaaataagagtattgaaaatgggcattcttgtctggttccagttcctagaggaaaaggttttccccattgagtatgctgtcagctgtgcgtttgttacat--ggcctttagtatgttgaggtacactccttctatgcctaatttattgggag--tttttatcatgaagggatgttgagttttatcaggtgctttttctgcatctattgagatgattctctggcttttgcccttaattctgttgatatgatgtatcatatttattgatttggatgtactgaaacatccttgcgtttttaggactaatcccatttgaacatgggtgtatcatgtttttgatgtgctgttagattcagtttgctggtattttgttcaggatttttgcatttgtgtgcatcagggatactgacctgcagttttgtcgctgttgttgttgtgtcctgacctggtttgggtagctgagtaatgctgaccttctagaataagtttggaaaagttcccttcccttccattttttttgaagagcttgtgtcaaactgatattagttcttctttaaatctttggtagaattcagcagtggagcca-caggtcccgggcttttctttgatgggagacttttgatgatggcttcagtcatattgcccattattggtttgttgaggtttttctttttcttcatggtttcatgttggtaggttctatgtgtgcagggatttattcatttcttctagtttttctcatttgctggtggatt i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e colAng1.NW_012116221v1 808630 1989 + 2368649 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3386083.000000 s hg38.chr4_KI270789v1_alt 44711 619 + 205944 gttgttcataatagtctctaatgattgtttgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttatttgggtcttctctctcttctcttagtttagctaacagtttatcaatttttgtttgtcttttcaaaaaggcaagttttcatttcatcgatcttttgtaatttttttttagtctctactatgtttagttctgctctgatctttatttatttattttctagtttaaaattttgggtttagtttgttcttcctttactagttcattgatgtgcattgttagattgtttatttgaaatctttctacttttttaaagcaggcatttatttctataaatttATTCctggggatcaacttacctctttctgtgtggtgaggagtgtctcttgggatgagccgatcccagccaggctcttcactttcctctttatgctgccatctccagtctctgtgcatcagaaggtctttatcactttcttgctgaattccagtgttttctccta-tacactctatttgatgtgttgttttctaattgttttggtcctttgtggagtaggagagcactgggcatctcttatcagccttcttgatgacatcTGG s panTro5.chr4 192837021 618 + 194502333 gttgttcataatagtctctaatgattgtttgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttatttgggtcttctctctcttctcttagtttagctaacagtttatcaatttttgtttgtcttttcaaaaagccaagttttcatttcatcgatcttttgcaatttttttt-agtctctactatgtttagttctgctctgatctttatttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgcattattagattgtttatttgaaatctttctacttttttaaagcaggcatttatttctataaatttATTCctggggatcaacttacctctttctctgtggtaaggagtgtctcttgggatgagccaattccagccaggctcttcactttcctctttatgctgccatctccagtctctgtgcatcagaaggtctttatcactttcttgctgaattccagtgttttctccta-tacactctatttgatgtgttgttttctaattgtttttgtcctttgtggagtaggagagcactgggcacctctaatcagccttcttgatgacatcTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192721603 618 + 195804263 gttgttcataatagtctctaatgattgtttgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttatttgggtcttctctctcttctcttagtttagctaacagtttatcaatttttgtttgtcttttcaaaaagccaagttttcatttcatcgatcttttgcaatttttttt-agtctctactatgtttagttctgctctgatctttatttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgcattattagattgtttatttgaaatctttctacttttttaaagcaggcatttatttctataaatttATTCctggggatcaacttacctctttctctgtggtaaggagtgtctcttgggatgagccaatcccagccaggctcttcactttcctctttatgctgccatctccagtctctgtgcatcagaaggtctttatcactttcttgctgaattccagtgttttctccta-tacactctatttgatgtgttgttttctaattgttttggtcctttgtggagtaggagagcactgggcacctctaatcagccttcttgatgacatcTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3757660 614 + 4876863 gttgttcataatagtctctaatgattgtttgtatttctgtggtatcagttcttagtcttcttttttgtttctgattttatttatttgggtcttctctctcttctcttagtttagctaacagtttatcaatttttgtttgtcttttcaaaaagccaagttttcatttcatcgatcttttgcaatttttttttagtctctactatgtttagttctgctctgatc----tttatttattttctagttttaaattttgggtttagtttgttcttcctttgctagttcattgatgtgcattgttagattgtttatttgaaatctttctacttttttaaagcaggcatttatttctataaatttATTCctggggatcaacttacctctttctctatggtgaggagtgtctcttgggatgagccaatcccagccaggctcttcactttcctctttatgctgccatctccagtctctgtgcatcagaaggtctttatcactttcttgctgaatttcagtgttttctccta-tacactctatttgatgtgttgttttctaattg-tttggtcctttgtggagtaggagagcactgggcacctctaatcagccttcttgatgacatcTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112644236 611 + 115148730 gtttttcataatagtctctaatgattgttggtatttctgtggtcccagttgttagtcttcttttttgtttctgattttatttatttgtgtcttctctctcttctcttagtttagctaacagtttatcaatttttgtttgtcttttcaaaaagccaacttttcatttcatcgatcttttgtattttttttt-agtctctactatgtttagttctgctctgatc-ttatttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgcattgttagattgtttatttgaactctttctacttttttaatgcaggcatttatttctataaatttATTCctggggctcaacttacctctttctctttggtgaggagtgtctcttggaatgagccaatcccagccaggctcttcgctttcctcttgatgctgccatctccagac------cttctgaaggtctttctcactttcttgctgaattccagtgttttctccta-tacactctatttgatgtgttgttttctaattgttttggtcctttgtggagtaggagagcactgaacacctctaatcagccttcttgatgacatcTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188926663 606 + 190429646 attgttcataatagtctctaatgattgtctgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttacttgggtcttctccc---------agtttagctaataatttatcaatttttgtttatcttttcaaaatgtcaacttttcatttcatcgatattttataattttttta-agtctctactatgtttaattctgctctgatc----tttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccagccaggcccttcacttccctctttatgctgccatctccagtctccatgcatcagaaggtctttatcgctttcttgctgaattccagtgttttctcctattatactctatttgatgtgttcttttctaattgttttggtcctttgtggagtaggagagcactaggcacctctaATCAGCGTTTTTGATGACATCTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187874103 606 + 189454096 attgttcataatagtctctaatgattgtctgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttacttgggtcttctccc---------agtttagctaataatttatcaatttttgtttatcttttcaaaatgtcaacttttcatttcatcgatattttataattttttta-agtctctactatgtttaattctgctctgatc----tttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccagccaggcccttcacttccctctttatgctgccatctccagtctccatgcatcagaaggtctttatcgctttcttgctgaattccagtgttttctcctattatactctatttgatgtgttcttttctaattgttttggtcctttgtggagtaggagagcactaggcacctctaATCAGCGTTTTTGATGACATCTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24255441 605 - 25927173 attgttcataatagtctctaatgattgtctgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttacttgggtcttctctc---------agtttagctaataatttatcaatttttgtttatcttttcaaaatttaaatttttcatttcatcgatattttataatgttttta-agtctctactatgtttaattctgctctgatc----tttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggataagccaattccagccaggcccttcacttccctctttatgctgccgtctccagtctccatgcatcagaaggtctttatcgctttcttgctgaattccagtgttttctccta-tatactctatttgatgtggtcttttctaattgttttggtcctttgtggagtaggagagcactaggcatctctaATCAGTGTTTTTGATGACATCTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3291502 609 + 4669795 attgttcataatagtctctaatgattgtctgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttacttgggtcttctctc---------agtttagctaacaatttatcaatttttgtttatcttttcaaaatgtcaacttttcatttcatcgatattttataattttttta-agtctctgctatgtttaattctgctctgatctttatttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccagccaggcccttcacttccctctttatgctgccatctccagtctccatgcatcagaaggtctttatcgctttcttgctgaattacagtgtttcctccta-tatactctatttgatgtgttcttttctaattgttttggtcctttgtggagtaggagagcactaggcacctctaatcagcgtttttgatgacatcTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134250499 598 + 135778131 gttgttcataatagtctctaatgat----tgtatttctgtggcctca---gttagtcttattttttgtttctgattttatttacttgggtcttctctc---------agtttagctaacaatttatcagtttttggttatcttttcaaaaagccaacttttcatttcatcgatattttataattttttaa-agtctctactatgtttagttctgctctgatc----tttatttattttctagttttaaattttgggtttagtgtgttcttcctttactagttcattgatgtacctcgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccatccaggcccttcagtttcctctttatgctgccatctccagtgtccgtacatcagaaggtctttattgctttcttgctgaattccagtgttttctccta-tatactctatttgatgtgttcttttctaattgttttggtcctttgtggagtaggagagcactaggcacctctaATCAGCGTTCTTGATGACATCTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2677503 609 - 2847728 gttgttcataatagtctctaatgattgtctgtatttctgtggtctcagttgttagtcttcttttttgtttctgattttatttacttgggtcttctctc---------agtttagctaacaatttatcaatttttgtttatcttttcaaaatgtcaacttttcatttcatcgatattttataattttttta-agtctctactatgtttaattctgctctgatctttatttatttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctacttttttaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccagccaggcccttcatttccctctttatgctgccatctccagtctccgtgcatcagaaggtctttatcgctttcttgctgaattccagtgttttctctta-tatactctatttgatgtgttcttttctaattgttttggtcctttgtggagtaggagagcactaggcacctctaatcagcgtttttgatgacatcTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 810619 604 + 2368649 gttgttcataatagtctctaatgat----tgtatttctgtggtctcagttgttagtcttcttttttgtttctggttttatttacttgggtcttctctc---------agtttagctaacaatttatcaattgttgtttatcttttcaaaaagccaacttttcattttgtcgatattttataattttttta-agtctctactatgtttagttctgctctgatc-ttatttacttattttctagttttaaattttgggtttagtttgttcttcctttactagttcattgatgtgccttgttagattgtttatttgaaatctttctactttttaaatgcaggcatttatttctataaacttATTCctggggctcaacttacctctttctctgtggtgaggagtgtctcttgggatgagccaattccagccaggcctttcacttccctctttatgctgccatctccagtctctgtgcatcggaaggtctttatcgctttcttgctgaattccagtgttttctccta-tatactctatttgatgtgttcttttctaattgttttggtcctttgtggagcagaagagcactaggcacctccaATCAACCTTCTTGATGACATCTGG i colAng1.NW_012116221v1 I 1989 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880333 126 - 59632846 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=114570.000000 s hg38.chr4_KI270789v1_alt 45330 18 + 205944 ATAGGACAATATTGATCA s panTro5.chr4 192837639 18 + 194502333 ATAGGACAATATTGATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722221 18 + 195804263 ATAGGACAATATTGATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758274 18 + 4876863 ATAGGACAATATTGATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112644847 18 + 115148730 ATGGGACAATATTGATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188927269 18 + 190429646 ATAGGACAATATTGATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187874709 18 + 189454096 ATAGGACAATATTGATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24256046 18 - 25927173 ATAGGACAATATTGATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3292111 18 + 4669795 ATAGGACAATATTGATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134251097 18 + 135778131 ATAGGACAGTATTGATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2678112 18 - 2847728 ATAGGACAATATTGATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 811223 18 + 2368649 ATAGGACAATATTGATCA i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16880459 18 - 59632846 ACAGGATAAATCTTATTA i canFam3.chr16 I 126 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e mm10.chr8 86515125 2022 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=519808.000000 s hg38.chr4_KI270789v1_alt 45348 91 + 205944 ATGATATATCTAGAAGCAATTTTGAATAAATAATATAGTGTTATAGGTTATAATTAAATATGTAAACCAAAAATAAAT-AAAGGAAAGGAAG s panTro5.chr4 192837657 91 + 194502333 ATAATATATCTAGAAGCAATTTTGAATAAATAATATAGTGTTATAGGTTATAATTAAATATGTAAACCAAAAATAAAT-AAAGGAAGGGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722239 91 + 195804263 ATAATATATCTAGAAGCAATTTTGAATAAATAATATAGTGTTATAGGTTATAATTAAATATGTAAACCAAAAATAAAT-AAACGAAGGGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758292 90 + 4876863 ATGATATATCTAGAAGCAA-TTTGAATAAATAATATAGTGTTATAGGTTATAATTAAATACGTAAACCAAAAATAAAT-AAAGGAAAGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112644865 86 + 115148730 ATGATATATCTAGAAGCAATTTTGAATAAATAATACAGTGTTACAGGTTTTAATTAAATATGTAATCCAAAAATAAA------GAAAGGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188927287 88 + 190429646 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATATGTAAACCAAAAATAAA----AGGAAAGGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187874727 88 + 189454096 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATATGTAAACCAAAAATAAA----AGGAAAGGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24256064 86 - 25927173 ATGATATGTCTAGAAGCAATTTTGAATAAATA--ATAGTGTTACAGGTTATAATTAAATATGTAAACCAAAAATAAA----AGGAAAGGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3292129 88 + 4669795 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATATGTAAACCAAAAATAAA----AGGAAAGGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134251115 87 + 135778131 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATACGTAAACCAAAAAT-AA----AGGAAAGGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2678130 88 - 2847728 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATATGTAAACCAAAAATAAA----AGGAAAGGAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 811241 87 + 2368649 ATGATATGTCTAGAAGCAATTTTGAATAAATAATATAGTGTTACAGGTTATAATTAAATACGTAAACCAAAAAT-AA----AGGAAAGGAAG i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86517147 90 - 129401213 ATGTGACACATAGACAAAATTGTGAATAAATATTCTACCACGATGGTATA-AATTAAATAAACAAATGAAAAACAAAT-AAAAGAAAGGAAA i mm10.chr8 I 2022 C 0 s canFam3.chr16 16880477 91 - 59632846 AGTGTGTATCTATATACAATTGTGAATAAATAATTTGGTTTAATGGTTTAAGATTAAACATACAAGCAAAAAATAAATAAAAGGAAAGTTA- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=32922.000000 s hg38.chr4_KI270789v1_alt 45439 5 + 205944 AAAAA s panTro5.chr4 192837748 5 + 194502333 AAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722330 5 + 195804263 AAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758382 5 + 4876863 AAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112644951 5 + 115148730 AAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188927375 5 + 190429646 AAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187874815 5 + 189454096 AAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24256150 5 - 25927173 AAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3292217 5 + 4669795 AAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134251202 5 + 135778131 AAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2678218 5 - 2847728 AAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 811328 5 + 2368649 AAAAA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86517237 5 - 129401213 ATAAa i mm10.chr8 C 0 I 1285 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2153766.000000 s hg38.chr4_KI270789v1_alt 45444 397 + 205944 CCTCCC-TTTTTTTCAGAGGCAGGGAGTTTTTATTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGGTATTAACTTTATTAACCCGCAACATTCATCATTTTAAAG--------------GCGTATATAGAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGATACTCA-TAATTATCTTCAACAGTGGCAATATTTAACCTTTTGAGTCAATCTCAACAGATTGGCAATATAACATAATATATATTGATAAGTGTCATTCTTGAT--AAAAAATCAAATTATTTTTCTATTTACAATTTTTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATATATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTCAAAG-TTTAGGAGTGAACAGCAT s panTro5.chr4 192837753 395 + 194502333 CCTCCC-TTTTTTTCAGAGGCAGGGAGTTTTTATTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGGTATTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GCATATATAGAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGATACTCA-TAATTATCTTCAACAGTGGCAATATTTAACCTTTTGAGTCAATCTCAACAGATTGGCAATATAACATAATATATATTGAT--GTGTCATTCTTGAT--AAAAAATCAAATTATTTTTCTATTTACAATTTTTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATATATTTCCCTGCCATGATAATATTAAAACATATCAAGATGCTCCTCAAAG-TTTAGGAGTGAACAGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722335 395 + 195804263 CCTCCC-TTTTTTTCAGAGGCAGGGAGTTTTTATTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGGTATTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GCGTATATAGAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGATACTCA-TAATTATCTTCAACAGTGGCAATATTTAACCTTTTGAGTCAATCTCAACAGATTGGCAATATAACATAATATATATTGAT--GTGTCATTCTTGAT--AAAAAATCAAATTATTTTTCTATTTACAATTTTTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATATATTTCCCTGCCATGATAATATTAAAACATATCAAGATGCTCCTCAAAG-TTTAGGAGTGAACAGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758387 396 + 4876863 CCTCCC--TTTTTTCAGAGGCAGGGAGCTTTTATTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGGTATTAACTTTATTAACCTGCAACTTTCATCATTTTAAAG--------------GCGTATATAGAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGATACTCA-TAATTATCTTCAACAGTGGCAATATTTAACCTTTTGAGTCAATCTCAACAGATTGGCAATATAACATAATATATATTGATAAGTGTCATCCTTGAT--AAAAAATCAAATTATTTTTCTATTTACAATTTTTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATATATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTCAAAG-TTAAGCAGTGAACAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112644956 389 + 115148730 CTCCCT-TTTTTTTCAGAGGCAGGGAGTTTTTATTTTTGGCTTCTGTAATGGTATTTCACCAAA-TTTAAAGGTATTAACTTTATTAACCTGCAACA--------TTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGTGATGCTCA-TAATTATCTTCAACAGTGGCAATATTTAACCTTTTGAGTCAGTCTCAACTGATTGGCAATATAACATAATATATATTGATAAGTGTCATTCTTGAT-AAAAAAATCAAATTATTTTTCTATTTACAATTTTTAGAAAAGGTTTAATGTAAAAGTATTT-TTCTTCTTTATATATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTCAAAG-TTTAGGAGTGAACAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188927380 392 + 190429646 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCAACAAGTTTTAAAGGTACTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGTTGCTCA-TAATTATCTTCAACAGTGGCAATATTTAATCCTTTGAGTCAGTCTCAACGGATTGGCAATATAAC-----ATATTTTGAT--GTGTCATTCTTGAT-AAAAAAATCAAATTATTTTTCTATTTATAATTTCTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATAGATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTTAAAC-TTTAAGAGTGAACAACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187874820 397 + 189454096 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCAACAAGTTTTAAAGGTACTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGTTGCTCA-TAATTATCTTCAACAGTGGCAATATTTAATCCTTTGAGTCAGTCTCAACGGATTGGCAATATAACATAATATATTTTGAT--GTGTCATTCTTGAT-AAAAAAATCAAATTATTTTTCTATTTATAATTTCTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATAGATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTTAAAC-TTTAAGAGTGAACAACAT i macFas5.chr5 C 0 I 306 s macNem1.NW_012013133v1 24256155 399 - 25927173 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCAACAAGTTTTAAAGGTACTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGTTGCTCA-TAATTATCTTCAACAGTGGCGATATTTAATCCTTTGAGTCAGTCTCAACGGATTGGCAATATAACATAATATATTTTGAT--GTGTCATTCTTGATAAAAAAAATCAAATTATTTTTCTATTTATAATTTCTACAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATAGATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTTAAACTTTTAAGAGTGAACAACAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3292222 398 + 4669795 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCAACAAGTTTTAAAGGCACTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGTTGCTCA-TAATTATCTTCAACAGTGGCAATATTTAATCCTTTGAGTCAGTCTCAACGGATTGGCAATATAACATAATATATTTTGAT--GTGTCATTCTTGATAAAAAAAATCAAATTATTTTTCTATTTATAATTTCTAGAAAAGGTTTAATGTAAAAATATTT-TTCTTCTTTATAGATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTTAAAC-TTTAAGAGTGAACAACAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134251207 400 + 135778131 TATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGGTAGTAACTTTATTAACCTGCAACATTCATCATTTTAAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGATGCTCATTAATTATCTTCAACAGTGGCAATATTTAATCTTTTGAGTCAGTCTCAACAGATTGGCAATATAACGTAATATATATTGATGAGTGTCATTCTTGAT--AAAAAATCAAATTATTTTTCTATTTATAATTTCTAGAAAAGGTTTAATGTAAAAATATTTTTTCTTCTTTATAGATTTCCTTGCTATGATAATGTTAAAACATATCAAGATGCTCCTTAAAC-TTTAAGAGTGAACAGCAT i chlSab2.chr7 C 0 I 303 s manLeu1.NW_012102221v1 2678223 394 - 2847728 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCAACAAGTTTTAAAGGTACTAACTTTATTAACCTGCAACATTCATCATTTTGAAG--------------GAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGCGTTGCTCA-TAATTATCTTCAACAGTGGCAATATTTAATCCTTTGAGTCAGTCTCAACGGATTGGCAATATAACATAATATATTTTGAT--GTGTCATTCTTGAT-AAAAAAATCAAATTATTTTTCTATTTATAATTCCTAGAAAAGGTTTAATGTAAAAATATTT----TTCTTTATAGATTTCCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTTAAAC-TTTAAGAGTGAACAACAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 811333 413 + 2368649 CATCCCCTTTTTTTCAGAGGCAGGGAGTCTTTAGTTTTGGCTTCTGTAATGGTATTTCACCAAGTTTTAAAGATACTAACTTTATTAATCTGCAACATTCATCATTTTAAAGGTGAATATAAAGGTGAGTATATAAAAACTATCAAAATGGGTCAGAAACAAGGTTTGTGATGCTCATTAATTATCTTCAACAGTGGCAATATTTAATCTTTTGAGTCAGTCTCAACAGATTGGCAATATAACATAATATATATTGATAAGTGTCATTCTTGAT-AAAAAAATCAAATTATTTTTCTATTTATAAGTTTTA-AAAAGGTTTAAGGTAAAAATATTT-TTCTTCTTTATAGATTTTCCTGCCATGATAATGTTAAAACATATCAAGATGCTCCTCAAAC-TTTAAGAGTGAACAGCAT i colAng1.NW_012116221v1 C 0 I 300 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=24618.000000 s hg38.chr4_KI270789v1_alt 45841 4 + 205944 AACA s panTro5.chr4 192838148 4 + 194502333 AACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722730 4 + 195804263 AACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758783 4 + 4876863 AACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645345 4 + 115148730 AACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188927772 4 + 190429646 AACA i rheMac8.chr5 C 0 I 305 s macFas5.chr5 187875523 4 + 189454096 AACA i macFas5.chr5 I 306 C 0 s macNem1.NW_012013133v1 24256554 4 - 25927173 AACA i macNem1.NW_012013133v1 C 0 I 305 s cerAty1.NW_012001672v1 3292620 4 + 4669795 AACA i cerAty1.NW_012001672v1 C 0 I 306 s chlSab2.chr7 134251910 4 + 135778131 AACA i chlSab2.chr7 I 303 C 0 s manLeu1.NW_012102221v1 2678617 4 - 2847728 AACA i manLeu1.NW_012102221v1 C 0 I 307 s colAng1.NW_012116221v1 812046 4 + 2368649 AACA i colAng1.NW_012116221v1 I 300 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2106313.000000 s hg38.chr4_KI270789v1_alt 45845 395 + 205944 TTCCATTTTAGTTGAAGCATTCTTTCACATAGCCAACATATTTTTTCAAGACACTC-TAAGAACTCGTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTACTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTAAATTAAACATTGTTATAACTGGG---TTTGTTTTTTTTTTTGAAATTTAATTTTCCACGGTGCAGTCCTCAAGTTA---TTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCTGTAGGTATTCTCGTTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCAGTGATTTAGGTGGAAAAGTACAAGTTATTCTTCCATGATGGAT s panTro5.chr4 192838152 390 + 194502333 TTCCATTTTAGTTGAAGCATTCTTTCACATAGCCAACATATTTTTTCAAGACACTC-TAAGAACTCGTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTACTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTAAATTAAACATTGTTATAACTGGG---TTT-----TTTTTTTGAAATTTAATTTTCCACGGTGCAGTCCTCAAGTTA---TTCCTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCTGTAGGTATTCTCGTTCCATCAACC-----TTTTGTTGTGTTGTGGTATCCAGTGATTTAGGTGGAAAAGTACAAGTTATTCTTCCATGATGGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192722734 388 + 195804263 TTCCATTTTAGTTGAAGCATTCTTTCACATAGCCAACATATTTTTTCAAGACACTC-TAAGAACTCGTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTACTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTAAATTAAACATTGTTATAACTGGG---T-------TTTTTTTGAAATTTAATTTTCCACGGTGCAGTCCTCAAGTTA---TTCCTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCTGTAGGTATTCTCGTTCCATCAACC-----TTTTGTTGTGTTGTGGTATCCAGTGATTTAGGTGGAAAAGTACAAGTTATTCTTCCATGATGGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3758787 393 + 4876863 TTCCATTTTAGTTGAAGCATTCTTTCACATAGCCAACGTATTTTTTCAAGACACTC-TAAGAACTCATGAGGATACTACAGGAAAAATGTTCCTCTTGCCTACTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTAAATTAAACATTGTTATAACTGGG---TTTTTT--TTTTTTTGAAATTTAATTTTCCACGGTGCAGTCCTCAAGTTA---TTCTTTTATTCGGAGCCACTCATTCAGTTTCAACTTGCTGAGCAGGCAAGCAACCGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCTGTAGGTATTCTCGTTCCACCAACC-----TTTTGCTGTGTTGTGGTATCCAGTGATTTAGGTGGAAAAGTACAAGTTATTCTTCCATGATGGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645349 394 + 115148730 TCCAATTTTAGTTGAAGCATTCCTTCACGTAGCTAACATATTTTTTCAAGACACTC-GAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTACTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTAAATTAAACATTGTTATAACTGGG---GTTTTTT-TTTTTTTGAAATTTAATTTTCCGCGGTGCAGTCCTCAAGTTA---TTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGTGCAGGCAAGCAACTGCTTTTGGTTTCTGTGGAAACTGGATTCCTGTGGCTGCCTGTAGGTATTCTCGTTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCAGTGATTTAGGTGGAAAAGTACAAGGTATTCTTCCATGATGGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928081 389 + 190429646 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACAGGTTTTTTCAG-ACACTC-TAAGAACTCTTGAGGATGCTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGTTATAACTGTT-----------TTTCTTTTAAATTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCCTCCCGTAGGCATTCTCGGTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCGGTGATTTAGGTGCAGACGTGCAAGGTATTCTTTCATGATGGAT i rheMac8.chr5 I 305 C 0 s macFas5.chr5 187875527 389 + 189454096 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACAGGTTTTTTCAA-ACACTC-TAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGTTATAACTGTT-----------TTTCTTTTAAATTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCATTCCTTCAGTTTCAATTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCCTCCCGTAGGCATTCTCGGTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCGGTGATTTAGGTGCAGACGTGCAAGGTATTCTTTCATGATGGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24256863 390 - 25927173 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACAGGTTTTTTCAA-ACACTC-TAAGAACTCTTGAGGATGCTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGCTATAAGTGTT---G-------GGTTTTTTTAATTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCCGTAGGCATTCTTGGTCCACCAACC-----TTTTGTTGTATTGTGGTATCCGGTGATTTAGGTGCAGACGTACAAGGTATTCTATCATGATGGAT i macNem1.NW_012013133v1 I 305 C 0 s cerAty1.NW_012001672v1 3292930 390 + 4669795 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACGTGTTTTTTCAA-ACACTC-TAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGCTATAACTGTT---G-------GGTTTTTTAAATTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCCTCCCGTAGGCATTCTCGGTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCGGTGATTTAGGTGCAGACGTGCAAGGTATTCTTTCATGATGGAT i cerAty1.NW_012001672v1 I 306 C 0 s chlSab2.chr7 134251914 389 + 135778131 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACATGTTTTTTCAA-ACACTC-AAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGCTATAACTGTT-----------TTTTTTTTTAGTTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCAGAGCCACTCCTTCAGTTTCAATTTGCTGAGCAGACAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCCGTAGGCATTCTCGGTCCACCAACC-----TTTTGTTGTGTTGTGGTATCCGGTGATTTAGGTGCAAACGTACAAGGTATTCTTTCATGATGGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2678928 390 - 2847728 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACATGTTTTTTCAA-ACACTC-TAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTGCTGAGCTTTTAGTCATATTTTCCCTCAAACTTTTCTCAATTAAACATTGCTATAACTGTT---G-------GGTTTTTTTAATTTAATTTTCCATGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGGCAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCCTCCCGTAGGTATTCTCGGTCCACCAACT-----TTTTGTTGTATTGTGGTATCCGGTGATTTAGGTGCAGACGTACAAGGTATTCTATCATGATGGAT i manLeu1.NW_012102221v1 I 307 C 0 s colAng1.NW_012116221v1 812050 398 + 2368649 TTCCATTTCAGTTGAAGCATTCCTTCACAGAGCCAACATGTTTTTTCAA-ACACTCTTAAGAACTCTTGAGGATACTACAGGAAAAATGTTCCTCTTGCCTGCTAGGCTTTTAGTCATATTTTCCCTCAAA-TTTTCTCAATTAAACATTGCTATAACTGTTGTTG-------TTTTTTTTTAATTTAATTTTCCGTGGTGCAGTCCTCAAGTTATTTTTCTTTTATTCGGAGCCACTCCTTCAGTTTCAACTTGCTGAGCAGACAAGCAACTGCTTTTGGTTTCTATGGAAACTGGATTCCTGTGGCTGCCCGTAGGCATGCTCGGTCCACCAACCCTGTGTTGTGTTGTGTTGTGGTGTCCGGTGATTTAGGTGCAAACGTGCAAGGTATTGTTTCATGATGGAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189565023 1335 - 190850796 I e cebCap1.NW_016107886v1 939243 1370 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3332143 1329 - 5030052 I e saiBol1.JH378165 1206381 0 + 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=245272.000000 s hg38.chr4_KI270789v1_alt 46240 25 + 205944 ATGATATGGTCATAACAGGCTAGGA s panTro5.chr4 192838542 25 + 194502333 ATGATATGGTCATAACAGCCTGGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723122 25 + 195804263 ATGATATGGTCATAACAGCCTGGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759180 25 + 4876863 ATGATATGGTCATAACAGGCTGGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645743 25 + 115148730 ATGATATGGTCATAACAGGCTGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928470 25 + 190429646 ATGATACGGTCATGACAGGCTGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187875916 25 + 189454096 ATGATACGGTCATGACAGGCTGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257253 25 - 25927173 ATGATATGGTCATGACAGGCTGGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293320 25 + 4669795 ATGATATGGTCATGACAGGCTGGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252303 25 + 135778131 ATGATATGGTCATGACAGGCTGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2679318 25 - 2847728 ATGATATGGTCATGACAGGCTGGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 812448 25 + 2368649 ATGATATGGTCATGACAGGCTGGGA i colAng1.NW_012116221v1 C 0 I 5 s calJac3.chr3 189566358 25 - 190850796 aTGATACGGTGATGATGGGCTGGGA i calJac3.chr3 I 1335 C 0 s saiBol1.JH378165 13051189 25 - 14256875 aTGATATGGTGATGACGGGCTGGGA i saiBol1.JH378165 I 1267 C 0 s cebCap1.NW_016107886v1 940613 25 - 2196201 atgacATGGTGATGACGGGCTGGGA i cebCap1.NW_016107886v1 I 1370 C 0 s aotNan1.NW_018492112v1 3333472 25 - 5030052 aTGATATGGTGATGACGGGCTGGGA i aotNan1.NW_018492112v1 I 1329 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1198916.000000 s hg38.chr4_KI270789v1_alt 46265 152 + 205944 TCTAATCGGACCCAGAGAACTGAGAGACTGGAAGGTACATCAGGAAGGCTGCAATGTGTTTTATACAAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGTCTTATGGATTGGGAGTGAAGAATCTTCTGCTGCCTGAGATAACAAGTA s panTro5.chr4 192838567 152 + 194502333 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTACATCAGGAAGGCTGCAATGTGTTTTATACAAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATTGGGAGTGAAGAATCTTCTGCTGCCTGAGATAACAAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723147 152 + 195804263 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTACATCAGGAAGGCTGCATTGTGTTTTATACAAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATTGGGAGTGAAGAATCTTCTGCTGCCTGAGATAACAAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759205 152 + 4876863 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGCACATCAGGAAGGCTGCAGTGTGTTTTATACAAATTGTATGCTGTCCTAGTAACCTTTCCATCAGAGGCCTTATGGATTGGGAGTGAAGAATCTTCTGCTGCCTGAGATAACAAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645768 152 + 115148730 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTACATCAGGAAGGCTGCAATGTGTTTTATACAAATTGTATGCCATCCTAGTAACTTTTCCATCAGAGGCCTTATGGATCGGGAGTGAAGAATCTTCTGCTGCCTGAGATAACAAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928495 152 + 190429646 TCTAATGGGACCCAGGGACCTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTGTGTTATGCGAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATCAGGAGTGAAGAATCTTCTGCTGCATGGGATAACAAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187875941 152 + 189454096 TCTAATGGGACCCAGGGACCTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTGTGTTATGCGAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATCAGGAGTGAAGAATCTTCTGCTGCATGGGATAACAAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257278 152 - 25927173 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTGTGTTATACGAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATCAGGAGTGAAGAATCTTCTGCTGCATGGGATAACAAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293345 152 + 4669795 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTGTGTTATACGAATTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCCTTATGGATCAGGAGTGAAGAATCTTCTGCTGCATGAGATAACAAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252328 152 + 135778131 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTATTTTATACGAATTGTATGCTGTTCTAGTAACTTTTCCATCAGAGGCCTTATGGATCAGGAGTGAAGAATCTTCTGCTGCATGGGATAACAAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2679343 152 - 2847728 TCTAATGGGACCCAGGGAACTGAGAGACTGGAAGGTGCACCAGGAAGGCTGCAATGTGTTTTATACGAGTTGTATGCTGTCCTAGTAACTTTTCCATCAGAGGCTTTATGGATCAGAAGTCAAGAATCTTCTGCTGCATGGGATAACAAGTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189566383 149 - 190850796 GCTAATGGGAT-CAGGGAACTGAGAGACTGGAAGGTACATGAGGGAGGCCGTAATGTGT-TTATACACATGATATACTGTGCTAGTGACGTTTCCATCAGA-GCCTCATAGCTCAGCAGTGGAGAATCTTCTGCTGCGTGAGATAACAAGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13051214 148 - 14256875 TCTAATGGGATCCAGGGAACTGAGAGACTGGAAGGTCCATGAGGAAGGCCACAGTATGT-TTATGCAGATTGTATGCTGTGCAAGTGATCTTTCCATTAGAGGCCTTATAGCTCAGCAGTGGAGAATCTT---CCGCATGAGAAAACAAGTA i saiBol1.JH378165 C 0 I 509 s cebCap1.NW_016107886v1 940638 148 - 2196201 TCTAGTGCGATCCAGGGATCTGGGAGGCTGGAAGGTCCATGAGGAAGGCCGCAATGTGT-TTATACAGACTGTATGCTGTGCTAGTGACTTTTCCATCAGAGGCCTTACAGCCCAGCAGTGGAGAACCTT---CCGCATGAGATGACAAGTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3333497 150 - 5030052 TCTAATGGGATTCAGGGATCC-AGAGACTGGAAGGTACATGAGGAAGGCCACAATGTGT-TTATGCAGATTATATACTGTGCTAGTGACTTTTCCATCAGAGGCCTTATAGCTCAGCAGTGGAGATTCTTCTGCTGCGTGAGATAACAAGTC i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e colAng1.NW_012116221v1 812473 5 + 2368649 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=14007.000000 s hg38.chr4_KI270789v1_alt 46417 4 + 205944 GGAA s panTro5.chr4 192838719 4 + 194502333 GGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723299 4 + 195804263 GGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759357 4 + 4876863 GGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645920 4 + 115148730 GGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928647 4 + 190429646 GGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876093 4 + 189454096 GGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257430 4 - 25927173 GGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293497 4 + 4669795 GGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252480 4 + 135778131 GGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2679495 4 - 2847728 GGAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189566532 3 - 190850796 AGA- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 940786 3 - 2196201 GGG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3333647 3 - 5030052 GGA- i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e saiBol1.JH378165 13051362 509 - 14256875 I e colAng1.NW_012116221v1 812473 5 + 2368649 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1232463.000000 s hg38.chr4_KI270789v1_alt 46421 153 + 205944 CCCTCCTGCCAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGAATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATGCTTCTGAGGTAATTTCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATCGATATGGCCAATG s panTro5.chr4 192838723 153 + 194502333 CCCTCCTGCTAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGAATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATGCTTCTGAGGTAATTTCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATCGATATGGCCAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723303 153 + 195804263 CCCTCCTGCTAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGAATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATGCTTCTGAGGTAATTTCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATCGATATGGCCAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759361 153 + 4876863 CCCTCCTGCTAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGAATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATGCTTCTGAGGTAATTTCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATCGATATGGCCAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112645924 152 + 115148730 CCCTCCTGCAAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGGATGTTAAATACATTGGAAATCTTGAGTGCTGAAAG-TTTTCTTTTAATGCTTCTGAGGTGATTTCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATCGATATGGCCAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928651 190 + 190429646 CCCTCCCGTAAGCTACTTGATTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTTGATTTCTTTAGAATGTGTTGGAGGATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAGTGCTTCTGAGGTAATTCCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATTGATATGGTCAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876097 153 + 189454096 CCCTCCCGTAAGCTA-------------------------------------CTTGATTTCTTTAGAATGTGTTGGAGGATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAGTGCTTCTGAGGTAATTCCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATTGATATGGTCAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257434 153 - 25927173 CCCTCCCGTAAGCTA-------------------------------------CTTGATTTCTTTAGAATGTGTTGGAGGATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAGTGCTTCTGAGGTAATTCCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATTGATATGGTCAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293501 153 + 4669795 CCCTCCTGTAAGCTA-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGGATGTTAAATACATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATGCTTCTGAGGTAATTCCTTCCAGTAGAAAAAGCTTTGAAGTAAATGCATTGATATGGTCAGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252484 153 + 135778131 CCCTCCTGTAAGCTA-------------------------------------CTTAATTTCTTCAGAATGTGTTGGAGGATGTTAAATACCTTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAGTGCTTCTGAGGTAATTCCTTCTAGTAGAAAAAGCTTTGAAGTAAATGCATTTATATGGTCAACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2679499 153 - 2847728 CCCTCCTGTAAGCTA-------------------------------------CTTGATTTCTTTAGAATGTGTTGGAGGATGTTAAATACACTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAGTGCTTCTGAGGTAATTCCTTCCAGTAGAAAAAGCTTTGAAGTACATGCATTGATATGGTCAGCA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189566535 153 - 190850796 CCCTCGTGGAAGCTG-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGGACGTTCAACAAATTGGAAATCTTGAGTGCTGAAAGCTCTTCTTTTAATTCTTCCAAGGTATTTTCTTCCAGCAGAAAAAGCTTTGAAGTAGAAGCGTCGATATGCCCGACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13051871 130 - 14256875 CCCTCCTGCAAGCTG-------------------------------------CTTAATTTCTTTAGAATGTG---------------------GGAAATCTTGAGTGCTCAAAGCTTTTCTTTTAATTCTTCCAACGTATTTTCTTCCAGCAGAAAAAGCTTTGAAGTAAATGCATT--TATGCCCAACA i saiBol1.JH378165 I 509 C 0 s cebCap1.NW_016107886v1 940789 153 - 2196201 CCCTCCTGCAAGCTG-------------------------------------CTGAATTTCCTTAGAATGTGTTGGAGGACGTTCAACAAATTGGAAATCTTGAGTGCTGAAAGCTTTTCTTTTAATTCTTCCAAGGTATTTTCTTCCAGCAGAGAAAGCTTTGAAGTAAATGCATCGATATTCCCAACG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3333650 153 - 5030052 CCCTCCTGCAAGCTG-------------------------------------CTTAATTTCTTTAGAATGTGTTGGAGGATGTTCAACAAATTGGAAACCTTGAGTGCTGAAAGGTTTTCTTTTAATTTTTCCAAGGTATTTTCTTCCAGCAGAAAAAGCTTTGAAGTAAATGCATCGATATGCCCAACA i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e colAng1.NW_012116221v1 812473 5 + 2368649 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1400119.000000 s hg38.chr4_KI270789v1_alt 46574 182 + 205944 TAAA---------AT-ATCTGTTGGAATGCAATCAACTTCCAGTCCACAAGCGACAACGTTCACTTTCAGTCAGAGCTTCAACTCCATAACCAGCTTGATTCTCTACTTCTGGTAGTACATAAACTGGAAATTGTTTTCCGATTTTCTTCT--------GTTTCTTAGAACGTGGTCTTGTCTCCATCCTCCGGACACTG s panTro5.chr4 192838876 182 + 194502333 TAAA---------AT-ATCTGTTGGAATGCAATCAACTTCCAGTCCACAAGCGACAACGTTCACTTTCAGTCAGAACTTCAACTCCATAACCAGCTTGATACTCTACTTCTGGTAGTACATAAACTGGAAATTGTTTTCCGATTTTGTTCT--------GTTTCTTAGAACGTGGTCTTGTCTCCATCCTCCGGACACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723456 172 + 195804263 TAAA---------AT-ATCTGTTGGAATGCAATCAACTTCCAGTCCACAAGCGACAACGTTCACTTTCAGTCAGAACTTCAACTCCATAACCAGCTTGATACTCTACTTCTGGTAGTACATAAACTGGAAA----------ATTTTGTTCT--------GTTTCTTAGAACGTGGTCTTGTCTCCATCCTCCGGACACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759514 182 + 4876863 TAAA---------AT-ATCTGTTGGAATGCAATCAACTTCCAGTCCACAAGCGACAACGTTCACTTTCAGTCAGAGCTTCAACTCCATAACCAGCTTGATGCTCTACTTCTGGTAGTACATAAACTGGAAATTGTTTTCCGATTTTCTTTG--------GTTTTTTAGAACATGGTCTTGTCTCCATCCTCTGGACACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646076 182 + 115148730 TAAA---------AT-ATCTGTTGGAATGCGATCAACTTCCAGTCCATAAGCGACAACATTAACTTTCAGTCAGAGCTTCAACTCCATAACCAGCTTGATACTCTACTTCTGGTAGTACATAAACTGGAAACTGTTGTCCAATTTTCCTCT--------GTGTTTTAGAACATGGTCTTGTCTCCATCCTCCAGACACTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188928841 189 + 190429646 TAAAATAGCATACAT-AGCTGTTGGAATGCAGTCAACTTTCAGTCCATGAGCAACGACG-TCACCTTCAGTCAGAGCTTCAACTCCGTGACCAGCTTGATTCTCTGCTTCTGGTAGTACATAAACTGGACATGGTCTTCCGAGTTTCTTCC--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTCGACACTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876250 189 + 189454096 TAAAATAGCATACAT-AGCTGTTGGAATGCAGTCAACTTTCAGTCCATGAGCAACGACG-TCACCTTCAGTCAGAGCTTCAACTCCGTGACCAGCTTGATTCTCTGCTTCTGGTAGTACATAAACTGGAAATGGTCTTCCGAGTTTCTTCC--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTCGACACTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257587 180 - 25927173 TAAA---------AT-AGCTGTTGGAATGCAGTCAACTTTCAGTCCATAAGCGACGACG-TCACCTTCAGTCAGAGCTTCAACTCCGTGACCAGCTTGGTTCTCTGCTTCTGGTAGTACATAAACTGGAAATGGTCTTCCAAGTTTCTTCT--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTTGACACTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293654 180 + 4669795 TAAA---------AT-AGCTGTTGGAATGCAGTCAACTTTCAGTCCATGAGCAACGACG-TCACCTTCAGTCAGAGCTTCAGCTCCGTGACCAGCTTGATTCTCTGCTTCTGGTAGCACATAAACTGGAAATGGTCTTCCGAGTTTCTTCC--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTCAACACTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252637 180 + 135778131 TAAA---------AT-AGCTGTTGGAATGCAATCAACTTTCAGTCCATGAGCGAGGACG-TCACCTTCAGTCAGAGCTTCAACTCCATGACCAGCTTGATTCTCTACTTCTGGTAGTACATAAACTGGAAATTGTCTTCCGAGTTTCTTCT--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTGAACACTG i chlSab2.chr7 C 0 I 35 s manLeu1.NW_012102221v1 2679652 179 - 2847728 TAAA---------AT-AGCTGTTGGAATGCAGTCAACTTTCAGTCCGTGAGCAACGACG-TCACCTTCAGTCAGAGCTTCAGCTCCGTGACCAGCTTGATTCTCTGC-TCTGGTAGCACATAAACTGGAAATGGTCTTCTGAGTTTCTTCT--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTCGACACTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 812478 180 + 2368649 TAAA---------AT-AGCTATTGGAATGCAGTCAACTTTCAGTCCATGAGCGACGACA-TCACCTTCAGTCAGAGCTTCAACTCCATGACCAGCTTGATTCTCTACTTCTGGTAGTACGTAAACTGGAAATTGTCTTCCGAGTTTCTTCT--------GTTT-TTAGAACGTGGTCTTGTCTCCATCCTCTGGACACTG i colAng1.NW_012116221v1 I 5 C 0 s calJac3.chr3 189566688 171 - 190850796 CAAA---------ATGAGCTGCTGGAATGCAGTAAACGTCCAGCTCACAGGTGACAAAGTTCACTTTTAG-CAGC------------------GCTTGATGGTCTGGACTTGGTGCTACATAAACTGGAAATTGTCTTCTGATTTTCTTTCTTTTTTTTTTTTTTTAGAACGTGGTCTTGTCTCTA-CCTCTGGAAACTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13052001 181 - 14256875 TAAA---------ATGAGCTGCTGGAATGCAATAAACTTTCAGCTCCTAAGTGACAAGGTTCACTTTCAG-CAGCGCTTCAACTGCATACCAAGCTTGATACTCTGGTTTTGGTGCTACATAAACCGGAAATTGTCTTCTGATTTTCTTCC--------GTTTTTTAGAACATGGTCTTGTCTCTA-CCTCTGGAAACTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 940942 181 - 2196201 TAAA---------GTGAGCTGCTGGAATGCGATCAACTTTCCGCTCATAAGTGACAAAGTGCACTTTTAG-CAGTACTTCACCTCCATAACAAGCTTGACACTCTGGTTTTGGTGCTACATGAACTGGAAACTGTCTTCTGATTTTCGTCC--------GTTTTTTAGAACGTGGTCTTGTCTCTA-CCTCTGGAAACTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3333803 176 - 5030052 TAAA---------ATTAGCTGCTGGAA-----TAAACTTTCAGCTCATAAGTGACCAAGTTCACTTTTAG-CAGAGCTTCAACTCCATAACAAGCTTGATACTCTGGTTTTGGTGCTACATAAACTGGAAATTGTCTTCTGATTTTCTTCC--------ATTTTTTAGAATGTGGTCTTGTCTCTA-CCTCTGGAAACTC i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=221896.000000 s hg38.chr4_KI270789v1_alt 46756 27 + 205944 CAGCACATGAGTAACAACAGGTCTTGC s panTro5.chr4 192839058 27 + 194502333 CAGCACATGAGTAACAACAGGTCTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723628 27 + 195804263 CAGCACATGAGTAACAACAGGTCTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759696 27 + 4876863 CAGCACATGAGTAACAACAGGTCTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646258 27 + 115148730 CAGCACATGCGTAACAACAGGTCTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929030 26 + 190429646 -GGCACATGAGTAACAACAGGTCTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876439 26 + 189454096 -GGCGCATGAGTAACAACAGGTCTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257767 26 - 25927173 -GGCGCATGAGTAACAACAGGTCTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293834 26 + 4669795 -GGCGCATGAGTAACAACAGGTCTTGC i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2679831 26 - 2847728 -GGCGCATGAGTAACAACAGGTCTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 812658 26 + 2368649 -GGTGCATAAGTAACAACAGGTCTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189566859 27 - 190850796 CAGCACATGAGTAACCACAGGTCTTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13052182 27 - 14256875 CAGGACATGAGTAACCATAGGTCTTGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 941123 27 - 2196201 CAGCGCGTGAGTAACCACAGGCCTTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3333979 27 - 5030052 CAGCGCATGAGTAACCACAGGTCTTGC i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e chlSab2.chr7 134252817 35 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2952825.000000 s hg38.chr4_KI270789v1_alt 46783 316 + 205944 AGGCTAAATAACTTATGAATAAAGTTTCCTTCCTGAGGAGCTAGGTATTCCGACGTATCTTCAACATAGTCCTGAAGTTCATATGGCAATCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCCAATTTCGGCCAACTAGAGGCATCTGAAGGGACAGACCGTTGCTCAGAAACAGAGGGCTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTT--GGGTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATTTCTCCAACAGGATCAAATTTTTTATATACTCATTTGATAG----G---TTTTTT s panTro5.chr4 192839085 317 + 194502333 AGGCTAAATAACTTATGAATAAAGTTTCCTTCCTGAGGAGCTAGGTATTCCGACGTATCTTCAACATAGTCCTGAAGTTCATACGGCAATCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCCAATTTCGGCCAACTAGAGGCATCTGAAGGGACAGACAGTTGCTCAGAAACAGAAGGCTGTTTAGAATTTTCTAAATTCATTAAGAGCAATTT--GGGTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATTTCTCCAACAGGATCAAATTTTTTATATACTCATTTGATAG---TT---TTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723655 316 + 195804263 AGGCTAAATAACTTATGAATAAAGTTTCCTTCCTGAGGAGCTAGGTATTCCGACGTATCTTCAACATAGTCCTGAAGTTCATACGGCAATCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCCAATTTCGGCCAACTAGAGGCATCTGAAGGGACAGACAGTTGCTCAGAAACAGAAGGCTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTT--GGGTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATTTCTCCAACAGGATCAAATTTTTTATATACTCATTTGATAG----T---TTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3759723 318 + 4876863 AGGCTAAATAACTTATGAATAAAGTTTCCTTCCTGAGGAGCTAGGTATTCCGACGTATCTTCAACATAGTCCTGAAGTTCATATGGCAATCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCCAATTTCGGCCAACTAGAGGCATCTGAAGGGACAGACAGTTTCTCAGAAACAGAAGGCTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTT--GGGTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATTTCTCCAACAGGATCAAA-TTTTTATATACTCA-TTGATAGTTTTT---TTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646285 315 + 115148730 AGGCTAAATAACTTATGAATAAAATTTCCTTCCTGAGGAGCTAGGTGTTCCGACGTATCTTCAACATAGTCCTGAAGTTCATATAGCAATTGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCCAATTTCGGCCAACTAGAAGCATCTGAAGGGACAGACAATTGCTCAGAAACAGAAGGCTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTT--GGGTACTTTTCTGGAAATTGCCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAAAATTTTTATATACTCTTTTGATAG----T---TTTTT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929056 316 + 190429646 AGGCTAAATAACTTACGAATAAAATTTCCTTCCTGAGGAGCTAGGTGTTCCGACGTGTCTTCAACACAGTCCTGAAGTGCACATGGCGGTCGTCCTTGTGGCTTCTGAAATGCAGAAGGCCATCCAGTTTTGGCCAACCGGAGGCATCTGAAGGAACAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----G---TTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876465 316 + 189454096 AGGCTAAATAACTTACAAATAAAATTTCCTTCCTGAGGAGCTAGGTGTTCCGACGTGTCTTCAACACAGTCCTGAAGTGCACATGGCGGTCATCCTTGTGGCTTCTGAAATGCAGAAGGCCATCCAGTTTTGGCCAACTGGAGGCATCTGAAGGAACAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----G---TTTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24257793 315 - 25927173 AGGCCAAATAACTTACGAATAAAATTTCCTTCCTGAGGAGCTAGGTGTTCTGACGTGTCTTCAACACAGTCCTGAAGTGCACATGGCAGTCGTCCTTGTGGCTTCTGAAATGCAGAAGGCCATCCAGTTTTGGCCAACCGGAGGCATCTGAAGGAACAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTT-AAATTCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----G---TTTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3293860 316 + 4669795 AGGCCAAATAACTTACGAATAAAATTTCCTTCCTGAGGAGCTAGGTGTTCCGACGTGTCTTCAACACAGTCCTGAAGTGCACATGGCGGTCGTCCTTGTGGCTTCTGAAATGCAGAAGGCCATCCAATTTTGGCCAACCGGAGGCATCTGAAGGAGCAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----G---TTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134252852 312 + 135778131 AGGCCAAATAACTTACAAATAAAATTTCCTTCCTGAGGAGCTAGGTATTCCGATGTGTCTTCAACACAGTCCTG----TCACATGGCAGTCGTCCTTTTGGCTTCTGAAATGCAGAAGACCATCCAATTTTGGCCAACTGGAGGAATCTGAAGGAACAGACAATTGCTCAAAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAGATTTTTTGTATACTCATTTGATAG----G---CTTTTT i chlSab2.chr7 I 35 C 0 s manLeu1.NW_012102221v1 2679857 319 - 2847728 AGGCCAAATAACTTACGAATAAAATTTCCTTCCTGAGGAGCTAAGTGTTCCGACGTGTCTTCAACACAGTCCTGAAGTGCACATGGCGGTCGTCCTCGTGGCTTCTGAAATGCAGAAGGCCATCCAATTTTGGCCAACCGGAGGCATCTGAAGGAACAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTGAATTCATTAAGGGCAATTT--GGCTACTTTTCTGGAAATTGGCTTTAAGAGCTCATCCTGCATTTTAAAAATCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----GTTTTTTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 812684 316 + 2368649 AGGCCAAATAACTTACGAATAAAATTTCCTTCCCGAGGAGCTAGGTATTCCGATGTGTCTTCAACGTAGTCCTGAAGTTCACGTGGCAGTCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATTCAGTTTTGGCCAACCGGAGGCATCTGAAGGAACAAAAAACTGCTCAGAAACAGAAGGCTGTTTAGAATTTTCTAAAATCATTAAGGGCAATTT--GGCTGCTTTTCTGGAAATTGGCTTAAAGAGCTCATCCTGCATTGTAAACATCTCTCCAACTGGATCAAATTTTTTGTATACTCATTTGATAG----G---TTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189566886 314 - 190850796 ATGCT-GATGGCTTATAAACAAAATTTCCTTCCTGAGGAGCTAGGTG-TCCCGTGTATTTTTAACATAGTGCTGAAGTTCATACGGCAGTTGTCCTTTTGGCTTCTGAGATGCAGAATGCCACCAGATTTCAGCCAACTACAGGTGTCTGAAGGGACAGACAATTGCTCAGAAAC--AAGGCTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTCGAGGGTACTTTTATGGAAATTGGCTTTAAGAACTCATCCTGCATTTTTAAAATCTCTTCAACTGGATCAAATTTTTTATATACTTGGTTGATAG----G---ATTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13052209 315 - 14256875 GTGCTAAATGGCTTATAAACGAAATTTCCTTCCTGAGGAGCTAGGTA-TCTGATGTATTTTTAGCAGAGTCCTGAAGTTCATATGGCAATCGTCCTTCTGGCTTCTGAAATGCAGAAGGCCGTCAGATTTCAGTCAACTCGAGGTGTCTGAAGGGACAGACAATTGCTCAGAAACAGAAGGCCGTTTAGAATTTTCTAAATTAATTAAGGGCAATTC--GGGTACTTTTCTGGAAATTGGCTTTAAGAACTCATCCTGCATTTTTAAAATCTTTTCAACTGGATCAAATTTTTTATATACTTGTTTGATAG----T---TTTTTT i saiBol1.JH378165 C 0 I 18 s cebCap1.NW_016107886v1 941150 315 - 2196201 GTGCTAAATGGCCTATAAACAAAATTTCCTTCCTGAGGAGCTAGGTA-TCCGATGTATTCTTCACATAGTCCTCAAGTTCATTTGGCAATCGTCCTTTTGGCTTCTGAAGTGCAGAAGGCCATCAGATTTCAGCCAACTAGAGGTGTCTGAAGGGACAGACAATTGCTCAGAAACAGAAGGCTGTTCAGAATTTTCTAAATTCATTAAGGGCAATTT--GGGTACTTTTCTGGAAACTGGCTTCAAGAACTCATCCTGCATTTTTAAAATCTCTTCAACTGGATCAAATTTTTTATATACTTGTTTGATAG----G---TTTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3334006 315 - 5030052 ATGCTAAATGGCTTATAAACAAAATTTCCTTCCTGAGGAGCTAGGTA-TCCGATATATTTTTAACATAGTCCTGAAGTTCATGTGGCAATCGTCCTTTTGGCTTCTGAAATGCAGAAGGCCATCAGATTTCAGCCAACTAGAGGTGTCTGAAGGGACAGACAATTGCTCAGAAACAGAAGACTGTTTAGAATTTTCTAAATTCATTAAGGGCAATTC--GGGTATGTTTCTGGAAATTGGCTTTAAGAACTCATCCCGCATTTTTAAAATCTCTTCAACTGTATCAAATTTTTAATATACTTGTTTGATAG----T---TTTTTT i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1153.000000 s hg38.chr4_KI270789v1_alt 47099 1 + 205944 T s panTro5.chr4 192839402 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723971 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760041 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188929372 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876781 1 + 189454096 T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3294176 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s colAng1.NW_012116221v1 813000 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189567200 1 - 190850796 T i calJac3.chr3 C 0 I 1 s cebCap1.NW_016107886v1 941465 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 I 5 s aotNan1.NW_018492112v1 3334321 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 I 8 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e saiBol1.JH378165 13052524 18 - 14256875 I e manLeu1.NW_012102221v1 2680176 0 - 2847728 C e chlSab2.chr7 134253164 0 + 135778131 C e macNem1.NW_012013133v1 24258108 0 - 25927173 C e nomLeu3.chr7b 112646600 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1194986.000000 s hg38.chr4_KI270789v1_alt 47100 251 + 205944 AAAAAAAAATACATGACTTgccaggcgtggtggctcacgcttgtaatcccaacacttcgggaggctgaggaaggtggatcacctgacgtcaggagttcgagaccagcctgaccaatgtggagaaagcccatctctactaaaaat-------------ac-----aaaaaaaaaaaaaaaaatggctgggtgtggtggcgcatgcctgtaatcccagctacttgagaggctgaggcaggagaattgcttgaacctgggaggcagaggttg s panTro5.chr4 192839403 249 + 194502333 AAAAAAAGATACATGACTTgccaggtgtggtggctcatgcttgtaatcccagcacttcgggaggctgaggaaggcagatcacctgaggtcaggagttcgagaccagcctgaccaatgtggagaaagcccatctctactaaaaac-------------ac-------acacacacacacaattggctgggtgtggtggcgcatgcctgtaatcccagctacttgagaggctgaggcaggagaattgcttgaaccggggagggagaggttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192723972 249 + 195804263 AAAAAAAGATACATGACTTgccaggtgtggtggctcatgcttgtaatcccagcacttcgggaggctgaggaaggcagatcacctgaggtcaggagttcgagaccagcctgaccaatgtggagaaagcccatctctactaaaaac-------------ac-------acacacacacacaattggctgggtgtggtggcgcatgcctgtaatcccagctacttgagaggctgaggcaggagaattgcttgaaccggggagggagaggttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760042 249 + 4876863 TAAAAAAAATACATGACTTgccaggtgtggtggctcatgcttgtaatcccagcacttcgggaggctgaggaaggcggatcacctgaggtcaggagttcaagaccagcctgaccaatgtggagaaagcccatctctactaaaaac-------------ac-------acacacaaaaaaaattggctgggtgtggtggcacatgcctgtaatcccagctacttgagaggctgaggcaggagaattgcttgaacctgggagggagaggttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646600 247 + 115148730 --AAAAAAATACGTGACTTgccaggtgcaatggctcatgcctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctactaaaaat-------------ac-------aacaacaaaaaaaagtggccaggcacgatggtgcatgcctgtaatcctagctacttgggaggctgaagcaggagaattgcttgaacccgggaggtggaggttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929373 252 + 190429646 --AAAAAAATACAAGACTCAccaggcacggtggtttacacctgtaatcccagcactttgggaggccaa-gccggaggatcacctgagatcaggagtttgagaccagcctgaccaacatggag-aaccccgtctctactaaaaat------aacaacaac-------aacaaccacaaaaattggccaggcgtagtggcacatgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctgggagacggaggttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187876782 252 + 189454096 --AAAAAAATACAAGACTCAccaggcgcggtggttcacacctgtaatcccagcactttgggaggccaa-gccggaggatcacctgagatcaggagtttgagaccagcctgaccaacatggag-aaccccgtctctactaaaaat------aacaacaac-------aacaaccacaaaaattggccaggcgtagtggcacacgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctgggagacggaggttg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258108 260 - 25927173 --AAAAAAATACAAGACTCAccaggcgcggtggttcacacctgtaatcccagcactttgggaggccaaggccggaggatcacctaagatcaggagtttgagaccagcctgaccaacatggagaaaccccatctctactaaaaat-------acaaaaacaaaacaaaacaaaacaaaaaattggccgggcgcagtggcacatgcctgtaatctcagctacttgggaggctgaagcaggagaattgcttgaacctgggagacggaggttg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294177 252 + 4669795 --AAAAAAATACAAGACTCAccaggcgcggtggttcacacctgtaatcccagcacgttgggaggccaaggccggaggatcacctgagatcaggagtttgagaccagcctgaccaacatggag-aaccccgtctctactaaaaat------aacaacaac-------aacaa-caaaaaaattagctgggcgcagtggcacatgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctgggagacggaggttg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253164 259 + 135778131 --AAAAACATACAAGACTCAccagacacagtggttcacacctgtaatcccagcactttgggaggccaaggccagaggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacagaaaaaaaaaaa-------aaaaa-aaaaaaaattggccgggcgcagtggcacatgcctgtaatcccagctacttgggaggctgaagcagcagaattgcttgaacctgggagacggaggttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2680176 252 - 2847728 --AAAAAAATACAAGACTCAccaggcgcggtggttcacacctgtaatcccagcacgttgggaggccaaggccggaggatcacctgagatcaggagtttgagaccagcctgaccaatatggag-aaccctgtctctactaaaaat------aacaacaac-------aacaa-caacaaaattggccgggcgcagtggcacatgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctgggagacggaggttg i manLeu1.NW_012102221v1 C 0 I 6214 s colAng1.NW_012116221v1 813001 251 + 2368649 --AAAACAATGTAAGACTCAccagacacggtggttcacacctgtaatcccagcactttgggaggccaaggccagaggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaaccctgtc---actaaaaat------ccaaaaaaa-------aaaaaaaaaaaaaattggccaggtgcagtggcacatgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctgggaggcagaggttg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189567201 1 - 190850796 I e cebCap1.NW_016107886v1 941466 5 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3334322 8 - 5030052 I e saiBol1.JH378165 13052524 18 - 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=269947.000000 s hg38.chr4_KI270789v1_alt 47351 87 + 205944 cagtgagctgagatcgtgccactgcactccagcctggggcaacaagaaagaaactccgcct-caaaaaaaattaaata----aataaaaagt s panTro5.chr4 192839652 87 + 194502333 cagtgagctgagatcgtgccactgcactccagcctggggcaacaagaacgaaactccacct-caaaaaaaattaaata----aataaaaagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724221 88 + 195804263 cagtgagctgagatcgtgccactgcactccagcctggggcaacaagaacgaaactccacctacaaaaaaaattaaata----aataaaaagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760291 87 + 4876863 cagtgagctgagatcgtgccactgcactccagcctggggcaacaagaatgaaaccccacct-caaaaaaaattaaata----aataaaaagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646847 85 + 115148730 cagtgagctgaggtagtgccactgcactccagcct-gggtgacaagaatgaaactccacct-caaaaaaataaaaata----aataaaaa-t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929625 76 + 190429646 cagtgacctgagatcgcaccaccacactccaggct-gggcaacaagagcgaaactcctcct-caaaaaaataaaacta-------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877034 76 + 189454096 cagtgacctgagatcgcaccaccacactccaggct-gggcaacaagagcgaaactcctcct-caaaaaaataaaacta-------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258368 76 - 25927173 cagtgacctgagatcgcaccattacactccaggct-gggcaacaagagcgaaactcctcct-caaaaaaataaaaata-------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294429 76 + 4669795 cagtgacctgagatcgcaccaccacactccagcct-gggcaacaagagcgaaactcctcct-caaaaaaataaaacta-------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253423 75 + 135778131 cagtgacctgagatcgcaccaccacactccagcct-gggcgaaaggagcaaaacttctcct-caaaaaaataaaaat--------------- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 813252 80 + 2368649 cagtgccctgagattgcaccaccacactccagcct-gggcaacaagagcaaaattcctcct-caaaaaaataaaaataaaaa---------- i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189567201 1 - 190850796 I e cebCap1.NW_016107886v1 941466 5 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3334322 8 - 5030052 I e saiBol1.JH378165 13052524 18 - 14256875 I e manLeu1.NW_012102221v1 2680428 6214 - 2847728 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=57398.000000 s hg38.chr4_KI270789v1_alt 47438 10 + 205944 aaaaaaaTAA s panTro5.chr4 192839739 10 + 194502333 aaaaaaaTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724309 10 + 195804263 aaaaaaaTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760378 10 + 4876863 aaaaaaaTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646932 10 + 115148730 aaaaaaATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929701 10 + 190429646 aaaaaaataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877110 10 + 189454096 aaaaaaataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258444 10 - 25927173 aaaaaaataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294505 10 + 4669795 aaaaaaataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253498 10 + 135778131 aaaaaaataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2686642 10 - 2847728 aaaaaaaTAA i manLeu1.NW_012102221v1 I 6214 C 0 s colAng1.NW_012116221v1 813332 8 + 2368649 --aaaaataa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189567201 1 - 190850796 I e cebCap1.NW_016107886v1 941466 5 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3334322 8 - 5030052 I e saiBol1.JH378165 13052524 18 - 14256875 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 47448 1 + 205944 A s panTro5.chr4 192839749 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724319 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760388 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646942 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929711 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877120 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258454 1 - 25927173 a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294515 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253508 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2686652 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 813340 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189567202 1 - 190850796 A i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13052542 1 - 14256875 A i saiBol1.JH378165 I 18 C 0 s cebCap1.NW_016107886v1 941471 1 - 2196201 A i cebCap1.NW_016107886v1 I 5 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e aotNan1.NW_018492112v1 3334322 8 - 5030052 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1098604.000000 s hg38.chr4_KI270789v1_alt 47449 120 + 205944 AACACATGACTCTTCTGGACTACAAGCAGTATTAGTCTGGTTTTCTGCAGAAGCCTGTCCTGAGGAAGAATTTGGGCTAGCTGGTCAAGAATTTAAGTTGGAACC----CATGACAGCTGTCTT s panTro5.chr4 192839750 120 + 194502333 AACACATGACTCTTCTGGACTACAAGCAGTATTAGTCTGGTTTTCTGCAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAATTTAAGTTGGAACC----CATGACAGCTGTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724320 120 + 195804263 AACACATGACTCTTCTGGACTACAAGCAGTATTAGTCTGGTTTTCTGCAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAATTTAAGTTGGAACC----CATGACAGCTGTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760389 120 + 4876863 AACACATGACTCTTCTGGACTACAAGCAGTATTAGTCTGGTTTTCTGCAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAATTTAAGTTGGAACC----CATGACAGCTGTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112646943 118 + 115148730 AACACATGACTCTTCTGGACTACAAGCAGTATTAGCCTGGTTTTCTGCAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAATTTAAGTTAGAACC----CATGACAAC--TCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929712 120 + 190429646 aaCACATGACTCTTCTGGACTATAAGTAGTATTAGTCTGGCTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACC----CTCAACAGCTATCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877121 120 + 189454096 aaCACATGACTCTTCTGGACTATAAGTAGTATTAGTCTGGCTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACC----CTCAACAGCTATCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258455 124 - 25927173 aaCACATGACTCTTCTGGACTATAAGCAGTATTAGTCTGGCTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACCCTCACTCAACAGCTATCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294516 120 + 4669795 GACACATGACTCTTCTGGACTATAAGTAGTATTAGTCTGGCTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACC----CTCAACAGCTATCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253509 108 + 135778131 aaTACATGACTTTTCT---------GCAGTATTAGTCTGACTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTATACTAGCTGGTCAAGAACTTAAGTTAGAACC----CTCAACAGCTAT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2686653 120 - 2847728 AACACATGACTCTTCTGGACTATAAGTAGTATTAGTCTGGCTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACC----CTCAACAGCTATCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 813341 120 + 2368649 aaCACATGACTCTTCTGGACTATAAGCAGTATTAGTCTGACTTCCTACAGAAGCCTGTCCTGAGGAAGAATTTGGACTAGCTGGTCAAGAACTTAAGTTAGAACC----TTCAACAGCTATCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189567203 119 - 190850796 AACACACGA-CCTTCAGGACCATAAGCAGTATTAGTCTGGGTTCATTCAGGAGCCTGTCCTGAGGAAGAATTTGGACTCGCTGGTCTAGAACTTAAGTTAGAACC----CACAGCAGCTGTCTT i calJac3.chr3 C 0 I 330 s saiBol1.JH378165 13052543 120 - 14256875 AACACATGACCCTTCGCGACCATGATCAGTATGAGTCTGGTTTCATGCAGGAGCCTGTCCTGAGGAGGAATTTGGACTAGCTGGTCTAGAATTTAAGTTAGAACC----CACAACAGCTGTCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 941472 120 - 2196201 AACACATGACCCTTCGGGACCATGAGCGGTATTAGTCTGGTTTGATGCAGGAGCCTGTCCTGAGGAGGAATTTGGACTTGCTGGTCTAGGCCTTAAGTCAGAACC----CACAACAGCTGTCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3334330 119 - 5030052 AACACATGACCCTTTGGGACCATAAGCAGTATTAGTCTGGTTTCATGCAGGAGCCTGTCCTGAGGAAGAATTTGGACTCGCTGGTCTAGAACTTAAGTTAGAA-C----CACAACAGCTGTCTT i aotNan1.NW_018492112v1 I 8 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=536781.000000 s hg38.chr4_KI270789v1_alt 47569 82 + 205944 TCCGTCACTATTATTTTTACACTCTGTATCAATAATTAAACACTCCTTATCTGTATCACTGCTGCAGAGAACTGTATCTTCA s panTro5.chr4 192839870 82 + 194502333 TCCTTCACTATTATTTTTACACTCTGTATCAATAATTAAACACTCCTTATCTGTGTCATTGCTGCAGAGAACTGTATCTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724440 82 + 195804263 TCCTTCACTATTATTTTTACACTCTGTATCAATAATTAAACACTCCTTATCTGTGTCATTGCTGCAGAGAACTGTATCTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760509 82 + 4876863 TCCGTCACTATTATTTTTACACTCTGTATCAATAATTAAACACTCCTTAACTGTGTCATTGCTGCAGAGAACTGTATCTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647061 82 + 115148730 TCAATCACTATTATTTTTACACTCTGTATCAATATTTAAACACTCCTCATCTGTATCACTGCTGCAGAGAACTGGACCTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929832 81 + 190429646 TCCATCACTATTATTTTTATACTCTGTATCAATAATTAAGCACTCCTCATCTGTATCACTGC-GCAGGTAACGGTATCTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877241 81 + 189454096 TCCATCACTATTATTTTTATACTCTGTATCAATAATTAAGCACTCCTCATCTGTATCACTGC-GCAGGTAACGGTATCTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258579 81 - 25927173 TCCATCACTATTATTTTTATACTCTGTATCAATAATTAAGCACTCCTCATCTGTATCACTGC-GCAGGTAACGGTATCTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3294636 82 + 4669795 TCCATCACTATTATTTTTATACTCTGTATCAATAATTAAGCACTCCTCATCTGTATCACTGCTGCAGATAACTGTATCTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253617 11 + 135778131 -----------------------------------------------------------------------CGGTATCTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2686773 82 - 2847728 TCCATCACTATTATTTTTATACTCTGTATCAATAATTAAGCACTCCTCATCTGTATCACTGCTGCAGATAACTGTGTCTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 813461 82 + 2368649 TCCATCACTATAATTTTTATGCTCTGTATCAATAATTAAGCACTCCTCATCTGTATGACTGCTGCAGATAACTGTATCTTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189567652 61 - 190850796 TCCATCACTGTTATTTTTA---------------------CACTCCTCATCTGTATCACTGCTGCAGAGAACTGTGTCTTCA i calJac3.chr3 I 330 C 0 s saiBol1.JH378165 13052663 61 - 14256875 TCCATCACTATTATGTTTA---------------------CACTCCTCATCTGTATCGCTGCTGCAGAGAACTGTATCTTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 941592 61 - 2196201 TCCATCACTATTATTTTTA---------------------CACCCCTCATCTGTATCACGGTTGCAGAGAACCGTATCTTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3334449 61 - 5030052 TCCATCACTATTATTTTTA---------------------CACTCCTCATCTGTATCACTGCTGCAGAGAACTGTATCTTCA i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=4669393.000000 s hg38.chr4_KI270789v1_alt 47651 595 + 205944 GTTTTAGCTGCTTCTGATGTCACAGTCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACATTGGGTCTTTCAGCATCAACATGTACCATATCTATAGTCATATCATATTTATTAGCAGTTTCAATTTCCTGAGAATTTTCTAACTGTAAGGCATCAGATGTTTTCAAGTCACTATCTTGCCTCGAAGACTTGTCAGTATTTGATACCTTTTTGCCACATGATTCAAATCCCTGGTCATCTTTATTTTTGCACTCTTTAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCGACTGTTCAATGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTAGGAGCATCTGTCACGTTAGTTACTGTGGAAGTACTTGCTGGACTTCTTGGCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTTCAAGTTTTGTAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAGTGTTTTGGCACTCACT-ACTTCACAGGGCATGTCCATTTCAGATATAAACTCTTCAAGG-AT s panTro5.chr4 192839952 594 + 194502333 GTTTTAGCTGCTTCTGATGTCACAGTCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACATTGGGTCTTTCAGCATCAACATGTACCATATCTATAGTCATATCATATTTATTAGCAGTTTCAATTTCCTGAGAATTTTCTAACTGTAAGGCATCAGATGTTTTCAAGTCACTATCTTGCCTCAAAGACTTGTCAGAATTTGATACCTTTTTGCCACATGATTCAAATCCCTGGTCATCTTTATTTTTGCACTCTTTAGGGCCACCATTCATACCAGTGACCAGTTGTTTCTCCTTTTGCGACCATTCAATGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCGCTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTAGGAGCATCTGTCACGTTAGTTACTGTGGAAGTACTTGCTGGACTTGTTGGCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTTCAAGTTTTGTAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAATGTTTTGGCACTCACT-ACTTCACAGGACATGTCCA-TTCAGATATAAACTCTTCAAGG-AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192724522 594 + 195804263 GTTTTAGCTGCTTCTGATGTCACAGTCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACATTGGGTCTTTCAGCATCAACATGTACCATATCTATAGTCATATCATATTTATTAGCAGTTTCAATTTCCTGAGAATTTTCTAACTGTAAGGCATCAGATGTTTTCAAGTCACTATCTTGCCTCAAAGACTTGTCAGAATTTGATACCTTTTTGCCACATGATTCAAATCCCTGGTCATCTTTATTTTTGCACTCTTTAGGGCCACCATTCATACCAGTGACCAGTTGTTTCTCCTTTTGCGACCGTTCAATAAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCGCTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTAGGAGCATCTGTCACGTTAGTTACTGTGGAAGTACTTGCTGGACTTGTTGGCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTTCAAGTTTTGTAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAATGTTTTGGCACTCACT-ACTTCACAGGACATGTCCA-TTCAGATATAAACTCTTCAAGG-AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3760591 595 + 4876863 GTTTTAGCTGCTTCTGATGTCACAGTCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACATTGGGTCTTTCAGCATCAACATGTACCATATCTATAGTCATATCATATTTATTAGCAGTTTCAATTTCCTGAGAATTTTCTAACTGTAAGGCATCAGATGTTTTCAAGTCACTATCTTGCCTCGAAGACTTGTCAGAATTTGATACCTTTTTGCCACATGATTCAAATCCCTGGTCATCTTTATTTTTGCACTCTTTATGGCCACCATCCATACTAGTGACCAGTTGTTTCTCCTTTTGCGACTGTTCAATGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTAGGAGCATCTGTCATGTCAGTTACTGTGGAAGTACTTGCTGGACTTGTTGGCTCTGATGCTTTGGTGGTGGTTACTCCGAAAGTTTCCAGTTTTGTAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAATGTTTTGGCACTCACT-ACTTCACAGGACATGTCCATTTCAGATATAAACTCTTCAAGG-AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647143 589 + 115148730 GTTTTAGCAGCTTCTGATGTCACAGTCTTTTCCTTTGGGTTGCCTAGGTTTTCCAGAACATTAGGCCTTTCAGCATCAACATGTACCATATCTATAGTCATATCA----TATTAGCAGTTTCAACTTCCTGAGAATTTTCTAACTGTAAGGCATCAGATGTTTTCAAGTCACTATCTTGTGTCAAAGACTTGTCAGAATTTGATACCTTTTTGCCACATGATTTGAATCCCTGGTCATCTTTATTTTTGCACTCTTTAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAACTGTTCCAGGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTGCCACAGGCGTAGTTCCTGCTTTGGGGGTTGTGGGAGCATCTGTCACGTTAGTTACGGTGGAAGTACTTGCTGGACTTGGTGGCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTTCAAGTTTCGTAACATCACCATCAAAATCCAGATACAAG-TTTCAAGAGTCTCAATGTTTCGGCACTCACT-ACTTCACAGGACATGTCCATTTCAGATATAAACTCTTCAGAG-A- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188929913 589 + 190429646 GTTTTAGCTGCTTCTGATGTCACAGCCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACGTCAAGTC-TTCAGCATTAGCATGTACCATATCTATAGTCATATCATTTTTATTAGAAGTTTCAGTTTCCTGAGAATTTTCTAAC--TAAGGCGTCATATGTTTTCAAGTCACTACTTTGCATCAAAGGCTTGTCAGAATTTGATACCTGTTCACCACATGATTCGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAATTGTTCTGTGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGCGTCTGTCATGTTAGGTGCTGTGGAGGTACTTGCTGGACTTGGTGCCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAGTTTTTCGGCACTCACTGATTTCACAAGACATGTCCATTTCAGAT---AACTCTTCAGGG-A- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877322 589 + 189454096 GTTTTAGCTGCTTCTGATGTCACAGCCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACGTCAAGTC-TTCAGCATTAGCATGTACCATATCTATAGTCATATCATTTTTATTAGAAGTTTCAGTTTCCTGAGAATTTTCTAAC--TAAGGCATCAGATGTTTTCAAGTCACTACTTTGCATCAAAGGCTTGTCAGAATTTGATACCTGTTCACCACATGATTCGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAATTGTTCTGTGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTACCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGCGTCTGTCATGTTAGGTGCTGTGGAGGTACTTGCTGGACTTGGTGCCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAGTTTTTCGGCACTCACTGATTTCACAAGACATGTCCATTTCAGAT---AACTCTTCAGGG-A- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3294718 591 + 4669795 GTTTTAGCTGCTTCTGATGTCACAGCCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACGTCAGGTC-TTCAGCATCAGCGTGTACCATATCTATAGTCATATCATTTTTATTAGAAGTTTCAGTTTCCTGAGAATTTTCTAACTGTAAGGCGTCAGATGTTTTCAAGTCACTACCTTGCATCGAAGGCTTGTCAGAATTTGATACCTGTTCACCACATGATTCGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAATTGTTCTGTGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGTGTCTGTCATGTTAGGTGCTGTGGAGGTACTTGCTGGACTTGGTGCCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCACCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAGTTTTTCGGCACTCACTGATTTCACAAGACATGTCCATTTCAGAA---AACTCTTCAGGG-A- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134253628 590 + 135778131 GTTTTAGCTGCTTCTGATGTCACAGTCTTTTCCTTTGAGTTGTCTAGGTTTTCCAGAACACTAGGTC-TTCAGCATCAGCATGTACCGTATCTATAGTCATATCATTTTTATTAGAAGTTTCAGTTTCCTGAGAATTTTCTAACTGTAAGGCGTCAGATGTTTTCAAGTCACTACCTTGCATCAAAGGCTTGTCAGAATTTGATCCCTGTTCACCACATGATTCGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAATTGTTCTGTGAGAATCTGAGATAAACTTCTAGAATTAGCAGAAATGTCCGGTGCAGTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGCGTCTGTCATGTTA-GTGCTGTGGAAGTACTTGCCGGACTTGGTGGCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCGCCATCAAAATCCAGATACAAGTTTTCAAGAGTCTCAATTTTTCGGCACTTACTGATTTCACAAGACATGTCCATTTCAGAT---AACTCTTCAGAG-A- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2686855 589 - 2847728 GTTTTAGCTGCTTCTGATGTCACAGCCTTTTCCTTTGAGTTGTCTGGGTTTTCCAGAACGTCAGGTC-TTCAGCATCAGCGTGTACCGTATCTGTAGTCGTATCATTTTTATTAGAAGTTT--GTTTCCTGAGAATTTTCTAACTGTAAGGCGTCAGATGTTTTCAAGTCACTACCTTGCATCAAAGGCTTGTCAGAATTTGATACCTGTTCACCACATGATTCGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAATTGTTCTGTGAGAATCTGAGATAAACTTCTAGAATTAGCAGGAATGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGCGTCTGTCATGTTAGGTGCTGTGGAGGTACTTGCTGGACTTGGTGCCTTTGATGCTTTGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCACCATCAAAATCCAGATACAAATTTTCAAGAGTCTCAGTTTTTCGGCACTCACTGATTTCACAAGACATGTCCATTTCAGAA---AACTCTTCAGGG-A- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 813543 574 + 2368649 GTTTTAGCTGCTTGTGATGTCACAGTCTTTTCCTTTGAGTCGTCCAGGTTTTCCAGAACATCAGGTC-TTCAGCATCAGCATGTACCATATCTATAGTCGTATCATTTTTATTAGAAGTTTCAGTTTCCTGAGAATTTTCTAACTGTAAGGCGTCA------------TCACTACCTTGCATCAAAGGCTTGTCCGAATTTGATACCTGTTCACCACATGATTGGAATCCCTGATCATCTTTATTTTTGCACTCTTCAGGGCCACCATCCATACCAGTGACCAGTTGTTTCTCCTTTTGCAGTTGTTCTGTGAGAATCTGAGATAA--TTCTAGAATTAGCAGAAACGTCTGGTGCACTTGGTGCCACAGGTGTAGTTCCTGCTTTGGGGGCTGTGGGAGCGTCTGTCATGTTA-GTGCTGTGGAAGTACTTGCTGGACTTGGTGGCTTTGGTGC--TGGTGGTGGTTACTCCAAAAGTTCCAAGTTTTGCAACATCACCATCAAAATCCAGATACAAGTTTTCACGGGTCTCAATTTTTCGGCACACACTGATTTCACAAGACATGTCCATTTCAGAT---AACTCTTCAGGG-A- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189567713 569 - 190850796 CTTCTAGCTGCTTTTGATGTAACAGTCTTTTCCTTTGAGTTGTCT--GTTTTCTAGAACATTGGGTCTTTCGCCATCAGCATGTACCATATCTACAGTCATATCATTTTTATTAGAAGTTTCAATTTCCCGAGAATTTTCTAAC----AGGCATCAGATGTTTTCA------------------AAGACTTGTCCGAATATGACACCTTTTCCCCAGGTGATTCGAATCCCCGATCATCTTTATTTCTACACTCTTCAGGGCCACCGTTCACA-CAGTGT-CAGCTGTTTCTCCTTTCGCAATTGTTCCATCAGAAGCTGAGATGAGCGTCTAGAATCAGCAGGAATGTCTGGTGCGCTTGGTGCCACAGGTGTAGCTGCTGCTATGGGGGCTGCAGGAGGGTCCGTCGTGTCAGGGGCTGTGGGAGTA-TTGCTGGACCTGGTGACTTTGAGGCTTTGGTGACGGTCACTCCACGAGTTTCAAGTTCTTGGATATAATCATCAAAATCCAGATACAGATTTTCAAGGGTCTTAATTTTTTGGCACTCACTGACTTCACGGGACATGTCCATTTCAGATACAAACTCTTCAGGG-AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13052724 577 - 14256875 CTTTTAGCTGCTTCTGATGTACTAGTGTTTTCCTTCGAGTTGTTTAGGTTTTTTAGAACATTGGGTCTTTCGCCATCAGCATGTACCATATCTATAGTCACATCATTTTTATTAGAAGTTTCAATTACCTGAGAATTTTCCAAC----AGGCATCAGATGTTTTCAGGTCACTATCTTGCATCGAAGGCTCGCCAGAATTTGATACCTTTTCACCACGTGATTCGAACCCCCGACCATCTCTATCTCTCCACTCTTCAGGGCCAGCATCCACACCAGTGTCCAGCTGTTTCTCCTTTCACAATTGTTCCATCAGAATCTGAGATAAACACCTAGAATCAGCAGGAATGTCTGGTGCTCTTGGTGCAACAGGTGTAGCTGCTGCTTTGGGGGCTGTAGGAGGGTCTGCCATGTTAGGGACTGTGGAAGTA-TTGCTGGACTTGGTGACTTTGATGCTTTGGTGATAGTTACTCCACAAGTTTCAAGTTCTTTGACATCATCATCAAAATCCAGATACAGATTTTCAAGGGCCTCAATATTTTGGCACTCACTGACTTCACAG---------------CATACAAACTATTCAGGGAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 941653 590 - 2196201 CTTTCAGCTGCTTCTGATGTAA-AATCTTTTCCTTTGAGTTGCCTAGGTTTTCTAGAACATTGGGTCTTTCGCCATCAGCATGTACCATATCTATTGTCATATCATTTTTATTAGACGTTTCAATTTCCTGAGAATTTTCCAAC----AGGCATCAGATGTTTTCAGGTCACTGTCTTGCATGGAAGACTTGTCAGAATTTGATCCCTTTCCGCCACGTGATTCTAACCCCCGATCATCTTTATTTCTGCACCCTTCAGGGCCACCATCCACGCCAGTGTCCAGCTGTTTCTCCTTTCGCAATTGTTCCATCAGAATCTGAGATAAACGTCTAGAATCAGCAGGAATGTCGGGTGCGCTTGGTGTGACAGGTGTAGGTGCTGCTTTGGGGGCTGTAGGAGGGTCTGCCGTGTGAGGGGCTGTGGAAGTA-TTGCTGGACTTGGTCACTTTGATGCTTTGGTGATGGTCACTCCACGAGTGTCAAGTTCTTTGACATCATCATCAAAATCCAGATACAGATTTTCAAGGGTCTCAATTTTTCGGCACTCACTGACTTAACAGGACATGTCCATTTCAGATACAAACTCTTCAGGG-AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3334510 591 - 5030052 GTTTTAGCTGCTTCTGATGTAACAGTATTTTCCTTTGAGTTGTCTAGGTTTTCTAGAACATTGGGTCTTTCGCCATCAGCATGTACCATATCTATAGTCATATCATTTTTATTAGAAGTTTCGATTTCCTGAGAATTTTCCAAC----AGGCATCAGATGTTTTCAGGTCACTATCTTGCATCAAAGACTTGTCAGAATTTGACACCTTTTCACCACATGATTTGAATCCCCAATCATCTTTATTTCTGCACTCTTCAGGGCCACCATCCACACCAGTGTCCAGCTGTTTCTCCTTTCGCAATTGTTCCATCAGAATCTGAGATAAACGTCTAGAATCATCAGGAATGTCTGGTACGCTTGGTGCGACAGGTGTAGCTGCTGCTTTGGGGGCTGTAGGAGGGTCTGTCATGTTAGGGGCTGTGGAAGTA-TTGCTGGACTTGGTGACTTTGATGCTTTAGTGATGGTTACTCCACGAGTTTCAAGTTCTTTGACATCATCATCAAAATCCAGATACAGATTTTCAAGGGTCTCAATTTTTCAGCACTCACTGACTTCACAGGACATGTCCATTTCAGGTACAAACTTTTTAGGG-AA i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e canFam3.chr16 16880568 0 - 59632846 C e mm10.chr8 86517242 1285 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=394309.000000 s hg38.chr4_KI270789v1_alt 48246 57 + 205944 AAACCTCTTTTCTATGCCTGGTGGGAGAGTCAAAGATCCCTGTTCTTAAGGATGTAA---- s panTro5.chr4 192840546 57 + 194502333 AAATCTCTTTTCTATGCCTGGTGGGAGAGTCAAAGATCCCTGTTCTTAAGGATGTAA---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725116 57 + 195804263 AAATCTCTTTTCTATGCCTGGTGGGAGAGTCAAAGATCCCTGTTCTTAAGGATGTAA---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761186 56 + 4876863 AAACCTCTTTTCTATGCCTGGCGGGAGAGTCAAAGATCCCTGTTC-TAAGGATGTAA---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647732 57 + 115148730 AAACCTCTTTTCTATGCCTGGTGGGAGAGTCAAAGATCCCTGTTCTTAAAGATGTAA---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930502 57 + 190429646 AAGCCTCTTTTGTATGCATGGTGGGAGAGTCAAAGATCCCTATTCTTAAGAATGTAA---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877911 57 + 189454096 AAGCCTCTTTTGTATGCATGGTGGGAGAGTCAAAGATCCCTATTCTTAAGAATGTAA---- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295309 57 + 4669795 AAACCTCTTTTGTATGCATGGTGGGAGAGTCAAAGATCCCTATTCTTAAGTATGTAA---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254218 57 + 135778131 AAACCTCTTTTGTATGCATGTCGGGAGAGTCAAAGATCCCTATTCCTAAGGCTGTAA---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687444 57 - 2847728 AAACCTCTTTTGTATGCATGGTAGGAGAGTCAAAGATCCCTATTCTTAAGTATGTAA---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814117 55 + 2368649 AAAC--CTTTTGTATGCATGGTGGGAGAGTCAAAGATCCCTATTCTTAAGGATGTAA---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568282 57 - 190850796 AAGCCTCTTTTCTATGCGTGCTGAGGGAGTCAGAGATCTCTGCTCCTCAGCATCTAA---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053301 15 - 14256875 AAGCCTCTTTTCTGT---------------------------------------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942243 57 - 2196201 AAGCCTCTTTTCTATGCGTGGTGGGGGAGTCAAAGATCTCTGCTCGTAAGGATCCAA---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3335101 57 - 5030052 AAGCCTCTTTTCTATGCGTGGTGGGGGAGTCAAAGATCTCTGCTTCTAAGGATCTAA---- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16880568 61 - 59632846 AAATCTCTTATTTGAATATGATGGGAGATTCAAAGATCTCTGCCCATAAGGCTGAATGAAA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e mm10.chr8 86517242 1285 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1062667.000000 s hg38.chr4_KI270789v1_alt 48303 117 + 205944 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTTGAGGGAAGTAAAA-----ATAGTTGTTTTCT-AGCATAAAAGTAATTCCTTTTTCAAAGCTTCAAATTAATTTTGGATCAGT s panTro5.chr4 192840603 117 + 194502333 ATATATACACATATAATATAGTTATTGAATAACTTGGGTTTGAGGGAAGTAAAA-----ATAGTTGTTTTCT-AGCATAAAAGTAATTCCTATTTCAAAGCTTCAAATTAATTTTGGATCACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725173 117 + 195804263 ATATATACACATATAATATAGTTATTGAATAACTTGGGTTTGAGGGAAGTAAAA-----ATAGTTGTTTTCT-AGCATAAAAGTAATTCCTATTTCAAAGCTTCAAATTAATTTTGGATCACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761242 117 + 4876863 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTTGAGGGAAGTAAAA-----ATAGTTGTTTTCT-AGCATAAAAGTAATTCCTTTTTCAAAGCTTCAAATTAATTTTGGATCACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647789 117 + 115148730 ATATATACACAGATAATATGGTTATTGAATAACTTGGGTTCGAGGGAAGTAAAA-----ATAGTTGTTTTCT-AGCATAAAAGTAATTCCTTTCTCAAAGCTTCAAATTAATTTTGGATCACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930559 117 + 190429646 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTCGAGGAAAGTAAAA-----ATAGTTGTTCTCT-AGCATAAAAGTAATTCATTTTTCAAAGTTTCAAATTAATTTTGGATCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187877968 117 + 189454096 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTCGAGGAAAGTAAAA-----ATAGTTGTTCTCT-AGCATAAAAGTAATTCATTTTTCAAAGCTTCAAATTAATTTTGGATCTCT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295366 117 + 4669795 ATATATACACAGATAATACAGTTATTGAATAACTTGGGTTCGAGGAAAGTAAAA-----ATAGTTGTTCTCT-AGCATAAAAGTAGTTCATTTTTCAAAGCTTCAAATTAATTTTGGATCTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254275 117 + 135778131 ATATGTACACAGATAATATAGTTATTGAATAACTCGGGTTCGAGGGAAGTAAAA-----ATAGTTGTTCTCT-GGCATAAAAGTAATTCATTTTTCAAAGCTTCAAATTAATTTTGGATCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687501 117 - 2847728 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTCGAGGAAAGTAAAA-----ATAGTTGTTCTCT-AGCATGAAAGTAATTCATTTTTCAAAGCTTCAAATTAATTTTGGATCTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814172 117 + 2368649 ATATATACACAGATAATATAGTTATTGAATAACTTGGGTTCGAGGGAAGTAAAA-----ATAGTTGTTCTCT-AGCATAAAAGTAATTCATTTTTCAAAGCTTCAAATTAATTTTGGATCTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568339 116 - 190850796 ACATATACGCAGGTAATACAGTTATGGAATAACTTGGGTTCAAGGGAAATAAAA-----ATAATTGTTTTCA-AGCACAAAAGTCATTCATTTTTCAAAGCTTTAAA-TAATTTTGGGTCATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053316 114 - 14256875 --ATATACGCAAATAATACAGTTATTGAATAACTTGGGTTCAAGGGAAGTAAAA-----ATAATTGTATTCA-AGCATAAAAGTAATTCATTTTTCAAAGCTTCTAA-TTAATTTAGATCATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942300 117 - 2196201 ACATATTCGCGGATAATACAGTTATTGAATAACTTGAGTTCAAGGGAAGTAAAA-----ATAATTGTTTCCA-AGAATAAAAGTAATTCATTTTTCAAAGCTTCTAATTAATTTTGGATCATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3335158 117 - 5030052 ACATATACGCAGATAATACAGTTATTGAATAACTTGGGTTCGAGGGAAGTAAAA-----ATATTTGTTTTCA-AGCATAAAAGTAATTTATTTTTCAAAGCTTCAAATTAATTTTGGATCATT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86518527 109 - 129401213 acacacacacacacaATATTGGCA--AAATAATCTAGATT------GAGAGAAA-----ATAATTGTTTCCTAAATATAGAATTTATTTATTTTT-AACCCCTCAAATTCATTTTAGATTATG i mm10.chr8 I 1285 C 0 s canFam3.chr16 16880629 120 - 59632846 ATACATACACAAATATTATGGATGTCAAATAACTTGAGCTGGAGGCAGAAGAAACATTGACaattattttctaaatataaagttatttcaaatttaaaa--tttaaa-tGAATTTGGATTATA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1370724 16698 - 2520184 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=704764.000000 s hg38.chr4_KI270789v1_alt 48420 73 + 205944 GGGAGGATCATTTTTAAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAACAGAAGAATAAGAACAGTTCATTTT s panTro5.chr4 192840720 73 + 194502333 GGGAGGATCATTTTTAAACTTAATAAATGAG------AGAAAGTCC--------------------AGTTAAAACAGAAGAATAAGAACAGTTCATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725290 73 + 195804263 GGGAGGATCATTTTTAAACTTAATAAATGAG------AGAAAGTCC--------------------AGTTAAAACAGAAGAATAAGAACAGTTCATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761359 73 + 4876863 GGGAGGATCATTTTTAAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAACAGAAGAATAAGAACAGTTCATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647906 73 + 115148730 GGGAGGATCATTTTCAAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAATGGAAGAATAAGAACAGTTCATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930676 73 + 190429646 GGGAGGATCATTTTCCAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAGCGAAAAAATAAGAACAGTTCATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878085 73 + 189454096 GGGAGGATCATTTTTCAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAGTGAAAAAATAAGAACAGTTCATTTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295483 73 + 4669795 GGGAGGATCATTTTTCAACTTAATAAATGAG------TGAAAGTCC--------------------CGTTAAAGCGAAAAAATAAGAACAGTTCATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254392 73 + 135778131 GGGAGGATCATTTTTCAACTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAGCGAAAAAATAAGAACAGTTCATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687618 73 - 2847728 GGGAGGATCATTTTTCAATTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAGCGAAAAAATACGAACAGTTCATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814289 73 + 2368649 GGGAGGATCATTTTTCAGCTTAATAAATGAG------TGAAAGTCC--------------------AGTTAAAGCGAAAAAATAAGAACAGTTCATTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568455 73 - 190850796 GGGAGGATTATTTTTAAATGTAACAAACGAG------TGAAAGTCC--------------------AGTTAAATCAGAAGAATAAGGACAGTTCATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053430 73 - 14256875 GGGAGGATTATCTTTAAATGTAACAAATGAG------TGAAAGTCC--------------------AGTTAAATCAGAAGAATAAGGACAGGTCATTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942417 73 - 2196201 GGGAGGATTATTTTTAAATGTAACAAATGAG------TCAAAGTCC--------------------AGTTAAATCAGAAGAACAAGGACAGTTCACTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3335275 73 - 5030052 GGGAGGATTATTTTTAAACGTAACAAATGAG------TGCAAGTCC--------------------AGTTAAATCAGAAGAATAAGGACGGTTCATTTT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86518636 65 - 129401213 GGGCAGGAAACATTTAAAGTTAA--------------TGAAATTCC--------------------ACATCAAATTTAATAATGAAAGCAGACTATATT i mm10.chr8 C 0 I 626 s canFam3.chr16 16880749 99 - 59632846 CAGAGGGACATTTTAAAACTCAATAAATCAGTGTTATTGAAATTTCAAATAAAGAATTTTAACTGAAATTAAAACTGAAGAATAAGAACAGTTCATCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1387422 79 - 2520184 gagAGGATCATTTTTAAACTCAGTAAGCCTGTGGTATTGAAAGTCC--------------------TGTTAAAATTGAAGAATGAGAGTACTTTGTTGT i dasNov3.JH570353 I 16698 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1081302.000000 s hg38.chr4_KI270789v1_alt 48493 118 + 205944 AAGTAGAC-TCTCACAAGCTTGGTCAAATCAA--ATGCTCTAGGACCTTCTCGTATATTTTAGGATACT----TTACTTGTATttgggagatgattccccaggagtatttcatatattcacatgt s panTro5.chr4 192840793 118 + 194502333 AAGTAGAC-TCTCACAAACTTGGTCAAATCAA--ATGCTCTAGGACCTTCTCGTATATTTTAGGATACT----TTACTTGTATttgggagatgattccccaggagtatttcatacattcacatgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725363 118 + 195804263 AAGTAGAC-TCTCACAAACTTGGTCAAATCAA--ATGCTCTAGGACCTTCTCGTATATTTTAGGATACT----TTACTTGTATttgggagatgattccccaggagtatttcatacattcacatgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761432 118 + 4876863 AAGTAGAC-TCTCACAAGCTTGGTCAAATCAA--ATGCTCTAGGACCTTCTCGTATATTTTAGGATACT----TTACTTGTATttgggagatgattccccaggagtatttcatatattcacatgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112647979 118 + 115148730 AAGTAGAC-TCTCACAGGCTTGGTCAAATCAA--ATGCTCTAGGACCTTCTTGTATATTTTAGGATACT----TTACTTGTATtttgaagatgattccccaggagtatttcatatactcacatgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930749 118 + 190429646 AAGTAGAC-TCTCACAGGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATATTTTAGGATTCT----TTACTTGTATttgggagatgattcctccggagtgtttaatatattcacatgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878158 118 + 189454096 AAGTAGAC-TCTCACAGGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATATTTTAGGATTCT----TTACTTGTATttgggagatgattcctccggagtgtttaatatattcacatgt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295556 118 + 4669795 AAGTAGAC-TCTCACAGGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATATTTTAGGATACT----TTACTTGTATttgggagatgattcctcaggagtgtttaatatattcacatgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254465 117 + 135778131 AAGTAGAC-TCTCACAGGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATA-TTTAGGATACT----TTACTTGTATttgggagatgattcctcaggagtatttaatatattcacatgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687691 118 - 2847728 AAGTAGAC-TCTCACAGGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATATTTTAGGATACT----TTACTTGTATttgggagatgattcctcaggagtgtttaatatattcacatgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814362 113 + 2368649 AAGTAGAC-TCTCACCCGCTTAGTCAAATCAA--ATGCTCTAGGACCTTCTGGTATATTTTAGGA---------TACTTGTATttgggagatgattcctcaggaatatttaatatattcacatgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568528 119 - 190850796 AAGTAGCCCTTTCACGGGCTTGCTCAAATCAA--ATGCTCTAGAACGTTCTTGTATATTTTAGAATACT----TTACTTGTATTTGAGAGGTGATTCCCCAGGAGTATTTCATATATTCACATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053503 123 - 14256875 AAGTAGACTTTTCACATGTTTGTTCAAATCAA--ATGCTCTAGAATATTCTTGTATATTTTAGAATACTTTAATTACTTGTATTTGAGAGGTGATTCCCCAGGAGTATTTCAGATATTCACATGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942490 123 - 2196201 AAGTAGACCTCTCACAGGCTTGGTCAAATCAA--ATGCTCTAGAACATTCTTGTATATTTTAGGATACTTTAATTCCTTATATTTGAAAGGTGATTCCCCAGGAGTATTTCATATATTCACATGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3335348 123 - 5030052 AAGTAGACCTTTCACAGGCTTGATCAAATCAA--ATGCTCTGGAACATTCTTGTATATTTTAGAATACTTTAATTACTTGTATTTGAGAGATGATTTCCCAGGAGTATTTCATATATTCACATGT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16880848 120 - 59632846 AAGTAGAG-TCTCATAAACATGACCAAATCAA--CTTCTC-AGTACCTTTGCACAAATTTTAGGTAATTTTAATTACTTGTATttgaggggtaattttgct-gaatctttcatacttctgtaatt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1387501 124 - 2520184 AAGTAGAC-TCTTGCAGGCATGGCCAAACCAATGTTGCCTCAGGACTTTCTCACACATTTTAGAATATTTTATCTACTGCTGgttgggagacagttctccatgagtccctcacatttctacatgt i dasNov3.JH570353 C 0 I 831 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86518701 626 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=38293.000000 s hg38.chr4_KI270789v1_alt 48611 5 + 205944 ggtgt s panTro5.chr4 192840911 5 + 194502333 ggtgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725481 5 + 195804263 ggtgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761550 5 + 4876863 ggtgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648097 5 + 115148730 tgtgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930867 5 + 190429646 tgtgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878276 5 + 189454096 tgtgt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295674 5 + 4669795 tgtgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254582 5 + 135778131 tgtgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687809 5 - 2847728 tgtgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814475 5 + 2368649 tgtgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568647 5 - 190850796 TATGT i calJac3.chr3 C 0 I 316 s saiBol1.JH378165 13053626 5 - 14256875 TATGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942613 5 - 2196201 TATGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3335471 5 - 5030052 TATGT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16880968 5 - 59632846 catgt i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1387625 831 - 2520184 I e mm10.chr8 86518701 626 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=92710.000000 s hg38.chr4_KI270789v1_alt 48616 10 + 205944 aaacagagac s panTro5.chr4 192840916 10 + 194502333 aaacagagac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725486 10 + 195804263 aaacagagac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761555 10 + 4876863 aaacagagac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648102 10 + 115148730 aaacagacac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930872 10 + 190429646 aaacagaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878281 10 + 189454096 aaacagaggc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295679 10 + 4669795 aaacagaggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254587 10 + 135778131 aaacagaggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687814 10 - 2847728 aaacagaggc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814480 10 + 2368649 aaacagaggc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568968 10 - 190850796 Aaacagagac i calJac3.chr3 I 316 C 0 s saiBol1.JH378165 13053631 10 - 14256875 AAACAGAGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 942618 10 - 2196201 AAACAGAGAC i cebCap1.NW_016107886v1 C 0 I 314 s aotNan1.NW_018492112v1 3335476 10 - 5030052 AAACAGAGAC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16880973 10 - 59632846 aagaagcagc i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1387625 831 - 2520184 I e mm10.chr8 86518701 626 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=10920.000000 s hg38.chr4_KI270789v1_alt 48626 1 + 205944 t s panTro5.chr4 192840926 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725496 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761565 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648112 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930882 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878291 1 + 189454096 t i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295689 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254597 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687824 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814490 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568978 1 - 190850796 t i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053641 1 - 14256875 T i saiBol1.JH378165 C 0 I 316 s cebCap1.NW_016107886v1 942942 1 - 2196201 t i cebCap1.NW_016107886v1 I 314 C 0 s aotNan1.NW_018492112v1 3335486 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 I 4967 s canFam3.chr16 16880983 1 - 59632846 t i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1387625 831 - 2520184 I e mm10.chr8 86518701 626 - 129401213 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1317414.000000 s hg38.chr4_KI270789v1_alt 48627 170 + 205944 ctggcagcttttctttcaaatgatcttttcaaggatattgccattgtgaacagctttggaagtta-aggtagcttttccctctgtggtagagggca------------------ggttttcttggtgtttaggaaaattaaaataatgactacttttaggacaaagtttgagcaaacttacttgaggtc s panTro5.chr4 192840927 170 + 194502333 ctggcagcttttcttccaaatgatcttttcaaggatatcgccattgtgaacagctttggaagtta-aggtagcttttccctctgcggtagagggaa------------------ggttttcttggtgtttaggaaaattaaaataatgactacttttaggacaaagtttgagcaaacttacttgaggtc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725497 170 + 195804263 ctggcagcttttcttccaaatgatcttttcaaggatatcgccattgtgaacagctttggaagtta-aggtagcttttccctctgcggtagagggaa------------------ggttttcttggtgtttaggaaaattaaaataatgactacttttaggacaaagtttgagcaaacttacttgaggtc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761566 169 + 4876863 ctggcagcttttctttcaaatgatcttttcgaggatattgccattgtgaacagctttggaagtta-aggtagcttttccctctgt-gtagaaggca------------------ggttttcttggtgcttaggaaaattaaaataatgactacttttaggactaagtttgagcaaacttacttgaggtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648113 170 + 115148730 ctggcagcttttctttcaaataatcttttcaaggatattgccattgtcaacagctttggaagtta-aggtagcttttccctctggggtagagggca------------------ggttttcttggtgtctaggaaaattaaaataatgactacttttaggacaaagtttgagcaaacttacttgaggtc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188930883 169 + 190429646 gtggcagcttttctttcaaatgatcttttcaaggacattgccattgtgaacagctttggaagtta-aggtagcttttcccgctgcagtagagggca-------------------gttttcttggtgtctaggaaaattaaaatgatgactacttttagagcaaagtctgagcaaacttacttgaggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878292 169 + 189454096 gtggcagcttttctttcaaatgatcttttcaaggacattgccattgtgaacagctttggaagtta-aggtagcttttcccgctgcagtagagggca-------------------gttttcttggtgtctaggaaaattaaaatgatgactacttttagagcaaagtctgagcaaacttacttgaggcc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295690 169 + 4669795 gtgacagcttttctttcaaatgatcttttcaagggtattgccattgtgaacagctttggaagtta-aggtagcttttcccgctgcagtagagggca-------------------gttttcttggtgtctaggaaaattaaaataatgactacttttagggcaaagtctgagcaaacttacttgaggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254598 169 + 135778131 gtggcagcttttctttcaaatgatcttttcaaggatattgccattgtgaacagctttggaagtta-aggtagcttttcccgctgcagtagagggca-------------------gttttcttggtgtctaggaaaattaaaataatgactacttttagggcaaagtctgagcaaacttacttgaggcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687825 169 - 2847728 gtgacagcttttctttcaaatgatcttttcgagggtattgccattgtgaacagcttcggaagtta-aggtagcttttcccgctgcagtagagggca-------------------gttttcttggtgtctaggaagattaaaatgatgactacttttagggcaaagtctgagcaaacttacttgaggcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814491 170 + 2368649 gtggcagcttttctttcaaatgatcttttcaatgatattgccattgtgaacagctttggaagtta-aggtagcttttccctctgcattagaggaca------------------ggttttcttggtgtctaggaaaattaaaataatgactacttttagggcaaagtttgagcaaacttacttgaggcc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189568979 170 - 190850796 ctggcagcttttctttcaaatgatcttttcaaggatattggcatcgtgaacagctttggaagtta-aggtcgcttttccgtctcgggtagacagca------------------ggttttcttggtgtctcagaaagttaaaataatgactgcttttagggcaaagttggagcaagctcacttgaggtc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13053958 170 - 14256875 ctggcagcttttctttcaaatgatgttttcaaggatattggcattgtgaacagccttggaagtta-aggtagcttttccatctcgggtaaagagca------------------ggttttcttggtgtctcagaaagttaaaataatgactgcttttagggcaaagtttgagcaaactcacttgaggtc i saiBol1.JH378165 I 316 C 0 s cebCap1.NW_016107886v1 942943 170 - 2196201 ctggcagcttttctttcaaatgatcttttcaaggatactggcatcgtgaacagctttggaagtca-aggtagcttttccgtctcgggtagagagca------------------ggttttcctggtgtctcagaaagtcaaaataatgactgtttttagggcaaaatttgagcaagctcacttgaggtc i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16880984 189 - 59632846 ctggaaacttttgttctagactatcttttcaaggatattcgtatggtcaatggccttggaagtcagatacaatatctctctctgggttagagggcttgcttgctgtttgtttgctgtttgcttgctattcaggaaaactaagaaaatgtctcttttcagggaaaattttgaacacatttgccttcagtc i canFam3.chr16 C 0 I 160 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1387625 831 - 2520184 I e mm10.chr8 86518701 626 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=2825444.000000 s hg38.chr4_KI270789v1_alt 48797 424 + 205944 tgatatggtttggctgtgacctcacccaaatctcatcttgaattgtagctcccacaattcccatgtgttgtgggagatacctggtgggagttaattgaatcatgggggtaggcctttcccatgctattctcgtgatagtgaataggtctcatgagatctagcggtttcacaaaggggagtttc--cctgcacaagttctcttttc-----ttgtctgccgccatgtgagatgtgccttttacttccagccatgattgtgaggcctccccagccatgtggaactgtaagtccattaaaactctttcttttgtata-tgcccagtctcaggtgtgtctttatcagcagcatgaaaacagactaatacaaggtccattataaatgactggagtttcctaagctccagcttccatagctatgaagaaaatcc-actc s panTro5.chr4 192841097 424 + 194502333 tgatatggtttggctgtgacctcacccaaatctcatcttgaattgtagctcccacaattcccatgtgttgtgggagatacctggtgggaggtaattgaatcatggggatgggtctttcccatgctattctcgtgatagtgaataggtctcatgagatctagtggtttcacaaaggggagtttc--cctgcacaagttctcttctt-----ttgtctgctgccatgtgagatgtgccttttaccttcagccatgattgtgaggcctccccagccatgtggaactgtaagtccattaaaactctttcttttgtata-tgcccagtctcaggtgtgtctttatcagcagcatgaaaacagactaatacaagatccattataaatgactggagtttcctaagctccagcttccatagctatgaagaaaatcc-actc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192725667 424 + 195804263 tgatatggtttggctgtgacctcacccaaatctcatcttgaattgtagctcccacaattcccatgtgttgtgggagatacctggtgggaggtaattgaatcatggggatgggtctttcccatgctattctcgtgatagtgaataggtctcatgagatctagtggtttcacaaaggggagtttc--cctgcacaagttctcttctt-----ttgtctgctgccatgtgagatgtgccttttaccttcagccatgattgtgaggcctccccagccatgtggaactgtaagtccattaaaactctttcttttgtata-tgcccagtctcaggtgtgtctttatcagcagcatgaaaacagactaatacaaggtccattataaatgactggagtttcctaagctccagcttccatagctatgaagaaaatcc-actc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3761735 415 + 4876863 tgatatggtttggctgtgacctcacccaaatctcatcttgaattgtagctcccacaattcccatgtgttgtgggagatacctgg-------taattgaatcatgggggtaggtctttcccatgctattctcatgatagtgaataggtctcatgagatctagtggtttcacaaagaggagtttc--cctccacaagttctctt-tc-----ttgtctgccgccatgtgagatgtgccttttactttcagccatgattgtga-gcctccccagccatgtggaactgtaagtccattaaaactctttcttttgtata-tgcccagtctcaggtgtgtctttatcagcagcatgaaaacagactaatacaaggtccattataaacgactggaatttcctaagctccagcttccatagctatgaagaaaatcc-actc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648283 425 + 115148730 tgatgtggtttggctgtgaccccacccaaatctcatctcaaattgtggttcccacaattcccatgtgttgtgggagatacctggttggaggtaattgaatcatgggggtgggtctttcccatgctattctcgtgatagtgaataggtctcatgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctc-----ttgtctgctgccatgtgagatgtgcctttcgccttcagccatgattgtgaggcctccccaaccatgtggaactgtgagtccattacacctctttcttttgtatatttcccagtctcaggtatgtctttgtcagcagcatgaaaacagactaatataaggtccattataaaagactggagtttcctaagctccagcttccatagctatgaagaaaatcc-actc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931052 418 + 190429646 tgatgtggtttggcagtgaccccacccaaatctcatcttgaattatagttctcagaattcccgtgtgttgtgggagatacctggtgggaggtaattgaatcatgggggtgggtctt----atgctattctcgtgatagtgagtaagtctcacgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctc-----ttgtctgccgccatgtgagatgtacctttcaccttcagccatgattgtgaggcctccccagccatgtggaactgtgagttcattaaaactctttcttttgtatattgcccggtctcaggtgtgtctttatcaacagcatgaaaacagactaataaaatgtccattataaaagatcagagtttcctaagctccagcttctgca---gtgaagaaaatcc-actc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878461 421 + 189454096 tgatgtggtttggcagtgaccccacccaaatctcatcttgaattatagttctcagaattcccatgtgttgtgggagatacctggtgggaggtaattgaatcatgggggtgggtctt----atgctattctcgtgatagtgagtaagtctcacgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctc-----ttgtctgccgccatgtgagatgtacctttctccttcagccatgattgtgaggcctccccagccatgtggaactgtgagttcattaaaactctttcttttgtatattgcccggtctcaggtgtgtctttatcaacagcatgaaaacagactaataaaacgtccattataaaagatcagagtttcctaagctccagcttctgcagctgtgaagaaaatcc-actc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3295859 421 + 4669795 tgatatggtttggctgtgaccccacccaaatctcatcttgaattatagttcccacaattcccatgtgttgtaggagatacctggtgggaggtaattgaatcatgggggtgggtctt----atgctattctcgtgatagtgaataagtctcacgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctc-----ttgtctgccgccatgtgagatgtgcctttcaccttcagccatgattgtgaggcctccccagccatgtggaactgtgagttcattaaaactctttcttttgtatattgcccggtctcaggtgtgtctttatcaacagcatgaaaacagactagtaaaatgtccgatataaaagattggagtttcctaagctccagcttccacagctatgaagcaaatcc-actt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134254767 425 + 135778131 tgatatggtttggctgtgaccccacccaaatctcatcttgaattgtaattcccataattcccatgtgttgtgggagatacctggtgggaggtaattgaatcat-ggggtgggtctt----atgctattctcgtgatagtgaataagtctcacgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctcttcttttgtctgccaccatgtgagatgtacctttcaccttcagccatgattgtgaggcctccccagccatgtggaactgtgcattcattaaaactctttcttttgtatattgcccagtctcaggtgtgtctttatcaacagcatgaaaatagactaataaaatgtccattataaaagattggagtttcctaagctccagcttccgcagctatgaagcaaatcc-actt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2687994 421 - 2847728 tgatatggtttggctgtgaccccacccaaatctcatcttgaattatagttcccacaattcccatgtgttgtaggagatacctggtgggaggtaattgaatcatgggggtgggtctt----atgctattctcgtgatagtgagtaagtcttacgagatctggtggtttcataaaggggagtttc--cctgcacaagttctcttctc-----ttgtctgctgccatgtgagatgtgcctttcaccttcagccatgattgtgaggcctccccagccatgtggaactgtgagttcattaaaactctttcttttgtatattgcccggtctcaggtgtgtctttatcaacagcatgaaaacagactagtaaaatgtccattataaaagatcggagttttctaagctccagcttctgcagctgtgaagaaaatcc-actc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 814661 416 + 2368649 tgatatggtttggctgtgaccccacccaaatctcaacttg-----tagttcccacaattcccatgtgttgtgagagatacctggtgggaagtaattggatcatgggggtggatctt----aggctattctcgtgatagtgaataagtctctcgagatctggtggtttcataaaggggagtttc--cctgcgcaagttctcttctc-----ttgtctgccgccatgtgagacgtgcctttcaccttcagccgtgattgtgaggcctacccagccatgtggaactgtgagttcattaaaactctttcttttgcatattgcccagtctcaggtgtgtctttatcaacagcatgaaaacagactaataaaacgtccattataaaagattggcgtttcctaagctccagcttccgcagctatgaagaaaatcc-actc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569149 417 - 190850796 tgatgtggtttggctgtgtccacacctagatgtcatcttgaactgtagttcccacagttcccatgtgttgtgggagaaacctggtgggcggtaactgaatcatgggggcgggtctttc--ctgctattcttgtgatagggaataagcctcatgagatgtgatggttttataaaggggagtctctgcctgcacaagctctcttctc-------gtctgctgccctgtgag-tgagcctttcaccctctgccatgatgctgaggcaga---agccaggtggaaccatgagtccatgaaag--ctctcctctgtatgtcacccagtctca-gtacgtctttatcagcagcgtgaaaacagacagatacgaggtccgttataaaagactggagtttcctaagctccaggttctgcagctACGAAAGAATTCCAACTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054128 413 - 14256875 tgatacggtttgtctgtgtccccacccaaatctcatcttgaactgtagttcccacaattcccatgtgctgtgggagaaacctggtgagaggtaattgaatcatgagagtgggtctttc--attctattctcatgacagtgaatgagtctcatgagatgtgatggttttacaaaggggagtctctgcctgcacaagctctcttccc-------gtctgctgccctgtgag-tgagcctttcaccttctgccataatggtgaggtaga---agccatgtggaac--tgagtccattaaag--ctttcttctg--tgtttcccagtccca-gttcatctttatcagaagcatgaaaacagactgatcgaaggtccattataaaagattggagcttcctaagctccaggttctgcagctgcgaAAGAATTCCAACTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943113 416 - 2196201 tgatatggtttggcagtgtccccacccaaatctcatcttgaaccgtagttcccacaattcccgtgagttgtgggagaaacctggtggtaggtaattgaatcatgggggtgagtctttc--atgctcttctcatgatagtgaataagtctcatgagatgtgatggctttataaaggggagtctctgcctgcacaagctctctcctc-------gtctgctgccctgtgag-tgagcctttcgccttctgccatgacggtgaggcaga---agccatgtggaactgtgagtcgattaaag--ctttcttctt-atgttgcccagtctcg-gtacgtctttatcagcagcatgaaaacagactgacacaaggtccattataaaagactggcatttcctaagctccaggttctgcagctacgaaataattccaACTC i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1387625 831 - 2520184 I e canFam3.chr16 16881173 160 - 59632846 I e mm10.chr8 86518701 626 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=100941.000000 s hg38.chr4_KI270789v1_alt 49221 15 + 205944 agtatacaacttttc s panTro5.chr4 192841521 15 + 194502333 agtatacaACTTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726091 15 + 195804263 agtatacaACTTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762150 15 + 4876863 agtatacaACTTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648708 15 + 115148730 agtatacaACTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931470 15 + 190429646 agtgtacaACTTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878882 15 + 189454096 agtgtacaACTTTTC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3296280 15 + 4669795 agtatacaACTTTTt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255192 15 + 135778131 agtatacaacattTt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2688415 15 - 2847728 agtgtacaACTTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 815077 15 + 2368649 agtatacaACTTCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569566 15 - 190850796 AGTGTAAATCGTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054541 15 - 14256875 AGTATCCATCATTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943529 15 - 2196201 GGTATCCATCATTTC i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1388456 15 - 2520184 agtctacagctcttg i dasNov3.JH570353 I 831 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16881173 160 - 59632846 I e mm10.chr8 86518701 626 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=38149.000000 s hg38.chr4_KI270789v1_alt 49236 5 + 205944 ----ccttt s panTro5.chr4 192841536 5 + 194502333 ----CCCtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726106 5 + 195804263 ----CCTtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762165 5 + 4876863 ----ccttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648723 5 + 115148730 ----ccttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931485 5 + 190429646 ----CCTtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878897 5 + 189454096 ----CCTtt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3296295 5 + 4669795 ----ccttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255207 5 + 135778131 ----ccttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2688430 5 - 2847728 ----ccttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 815092 5 + 2368649 ----ccttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569581 5 - 190850796 ----CCTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054556 5 - 14256875 ----CCTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943544 5 - 2196201 ----CCTTT i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86519327 5 - 129401213 ----ccttc i mm10.chr8 I 626 C 0 s dasNov3.JH570353 1388471 5 - 2520184 atcac---- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16881173 160 - 59632846 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1247681.000000 s hg38.chr4_KI270789v1_alt 49241 153 + 205944 tttagcctaggagtcttgtgtcttttgccaacatccatgaaacaatgataatgtaactcattagattgcaagtagagt-a-aacctcagaccctttacaattA--AGTGTTTCTCCACAGTTTACATGAAATTGAAAAATGAAGGCACCAAGAA-TTT s panTro5.chr4 192841541 154 + 194502333 tttaacctaggagtcttgtgtcttttgccaacatccatgaaacaatgacaatgtaactcattagattgcaagtagagt-a-aacctcagaccctttataattG--AGTGTTTCTCCACAGTTTACATGAAATTGAAAAATGAAGGCACCAAGAATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726111 154 + 195804263 tttaacctaggagtcttgtgtcttttgccaacatccatgaaacaatgacaatgtaactcattagattgcaagtagagt-a-aacctcagaccctttataattG--AGTGTTTCTCCACAGTTTACATGAAATTGAAAAATGAAGGCACCAAGAATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762170 154 + 4876863 tttaacctaggagtcttgtgtcttttgccaacatccatgaaacaatgataatgtaactcattagattgcaagtagagt-a-aacctcagaccctttacaattA--AGTGTTTCTCCACAGTTTACATGAAATTGAAAAATGAAGGCACCAAGAATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648728 156 + 115148730 tttaatctaggagtcttgtgtcttttgccaacatccatgaaacaatgataagggaactcattagacagcaagtagagt-a-aacctcaggccctttacaattAACAGTGTTTCTCCACCATTTACATGAAATTGAAAAATCAAGGCACCGAGAATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931490 155 + 190429646 tttaacctaggagtcttgtgtcttttgccaacatctatgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACAGTGTTTCT-CACTGTTTACATGAAATTGAAAAATCAAGGCACCTAGAATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187878902 155 + 189454096 tttaacctaggagtcttgtgtcttttgccaacatctatgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACGGTGTTTCT-CACTGTTTACATGAAATTGAAAAATCAAGGCACCTAGAATTTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3296300 156 + 4669795 tttaacctaggagtcttgtgtcttttgccaacatctatgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACAGTGTGTCTCCACTGTTTACATGAAATTGAAAAATCAAGGCACCTAGAGTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255212 156 + 135778131 tttaacctaggagtcttgtgtcttttgccaacatgtttgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACAGTGTTTCTCCACTGTTTACATGAACTTGAAAACTCAAGGCACCTAGAATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2688435 155 - 2847728 tttaacctaggagtcttgtgtcttttgccaacatctatgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACAGTGTTTCT-CACTGTTTACATGAAATTGAAAAATCAAGGCACCTAGAATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 815097 155 + 2368649 tttaacctaggagtcttgtgtcttttgccaacatctatgaaacaatgataatgtaactaattagattgcaagcagagt-a-aacctcagaccctttacaattAACAGTGTTTCT-CACTGTTTACATGAAATTGAAAAATCAAGGCACCTAGAATTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569586 154 - 190850796 TTGAacctgggagtcttgtgtcttttgccaacgtcgatgaaagaatgat-acgtaactcattagattgcgagtagcgg-a-aaccgtagaccctttacagttAACAGTGTTTCTGCCTTGTTTACATGAAACTGAAAAATCAAGGCACCTCGAATTT- i calJac3.chr3 C 0 I 7 s saiBol1.JH378165 13054561 154 - 14256875 TTGAacctaagagtcttgtgtcttttgccaacatccatgaaagaatgat-acgtaactcattagactgcgagtagggg-a-aaccttagaccctttacaatGAACAGTATTTGTTCCTTGTTTATATGAAACCGAAAAATCAAGCCACCTAGAATTT- i saiBol1.JH378165 C 0 I 7 s cebCap1.NW_016107886v1 943549 153 - 2196201 ATGAacctaggagtcttgtgtcttttgccaacatccctgaaagaacgat-acgtaactcattagactgcaagtag-gt-a-aaccttagaccctttacaattAACAGTGTTTGTCCCTTATTTACATGAAACTGAAAAATCAAGGCACCTAGAATTT- i cebCap1.NW_016107886v1 C 0 I 38 s mm10.chr8 86519332 155 - 129401213 tttgacttaggcatattctgtcctctgccagaaactctgaaaagatagtgat-tctcttgttagattgggaacagagtaa-aaccccaggtcttctgtaattGGTATTGCTTCTTCACTGCTTTCACAAAATTAAGGCACTAAGGCATATAGTCTTT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16881333 156 - 59632846 tttgacccaggaatcttatattttctaacagaatccatcaaacagtaataatgcaacttgttatgtggcaaatagagt-aggacctttgatgttttacagCCAATAGTGTCTCTCCTCTATTTATATAAAACTGAAGAATCAAGGCATGCATATTTT- i canFam3.chr16 I 160 C 0 s dasNov3.JH570353 1388476 138 - 2520184 -ttaa-ctaagagt----gatctttagccagcactcagaaaactgcaatggactaacttgttagatcacaagcagaataa-aatctcagtcccAT----------ACTGCCTCTCCACTGTTTACAAAGAACTGAAGAAACAAGGCATATAGGTT--- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=107535.000000 s hg38.chr4_KI270789v1_alt 49394 14 + 205944 GTTTTTTTCTCCTT s panTro5.chr4 192841695 14 + 194502333 GTTTTTTTCTCCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726265 14 + 195804263 GTTTTTTTCTCCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762324 13 + 4876863 G-TTTTTTCTCCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648884 14 + 115148730 GTTTTTTTCTCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931645 14 + 190429646 GTTTTTTTCTCCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187879057 14 + 189454096 GTTTTTTTCTCCTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3296456 14 + 4669795 GTTTTTTTCTCCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255368 14 + 135778131 GGTTTTTTCTCCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2688590 14 - 2847728 GTTTTTTTCTCCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 815252 14 + 2368649 GTTGTTTTCTCCTT i colAng1.NW_012116221v1 C 0 I 23 s calJac3.chr3 189569747 14 - 190850796 TTTTTTTTCTCCTT i calJac3.chr3 I 7 C 0 s saiBol1.JH378165 13054722 14 - 14256875 TTTTCTTCCTCCTT i saiBol1.JH378165 I 7 C 0 s mm10.chr8 86519487 13 - 129401213 -GTTTCTTCTCTGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16881489 14 - 59632846 TGTTTCTTCTCTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388614 14 - 2520184 CTTTTCTTCTCTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=7847.000000 s hg38.chr4_KI270789v1_alt 49408 1 + 205944 A s panTro5.chr4 192841709 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726279 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762337 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648898 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931659 1 + 190429646 A i rheMac8.chr5 C 0 I 21 s macFas5.chr5 187879071 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3296470 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255382 1 + 135778131 A i chlSab2.chr7 C 0 I 23 s manLeu1.NW_012102221v1 2688604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 I 22 s calJac3.chr3 189569761 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054736 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s mm10.chr8 86519500 1 - 129401213 G i mm10.chr8 C 0 C 0 s canFam3.chr16 16881503 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388628 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=8745.000000 s hg38.chr4_KI270789v1_alt 49409 2 + 205944 CA s panTro5.chr4 192841710 2 + 194502333 TA i panTro5.chr4 C 0 I 1 s panPan2.chr4 192726280 2 + 195804263 TA i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3762338 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112648899 2 + 115148730 TA i nomLeu3.chr7b C 0 I 1 s macFas5.chr5 187879072 2 + 189454096 TA i macFas5.chr5 C 0 I 1 s cerAty1.NW_012001672v1 3296471 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 I 20 s calJac3.chr3 189569762 2 - 190850796 TA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13054737 2 - 14256875 TA i saiBol1.JH378165 C 0 I 1 s mm10.chr8 86519501 2 - 129401213 TA i mm10.chr8 C 0 I 1 s canFam3.chr16 16881504 2 - 59632846 TA i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1388629 2 - 2520184 TA i dasNov3.JH570353 C 0 I 1 e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931660 21 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=63282.000000 s hg38.chr4_KI270789v1_alt 49411 17 + 205944 CACACATCTGGGCTTTT- s panTro5.chr4 192841713 17 + 194502333 TTCACATCTGGGCTTTT- i panTro5.chr4 I 1 C 0 s panPan2.chr4 192726283 17 + 195804263 TTCACATCTGGGCTTTT- i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3762341 17 + 4876863 TTCACATCTGGGCTTTT- i gorGor5.CYUI01015356v1 I 1 C 0 s nomLeu3.chr7b 112648902 17 + 115148730 TTCACATCCGGGCTTTT- i nomLeu3.chr7b I 1 C 0 s macFas5.chr5 187879075 17 + 189454096 TTCACATCTGGGTTTTA- i macFas5.chr5 I 1 C 0 s calJac3.chr3 189569765 17 - 190850796 TTCACATCTGGGCTTTT- i calJac3.chr3 I 1 I 1 s saiBol1.JH378165 13054740 17 - 14256875 TTCACACCTGGGCTTTT- i saiBol1.JH378165 I 1 C 0 s mm10.chr8 86519504 17 - 129401213 TTCAGAGCTCAGTTTTT- i mm10.chr8 I 1 C 0 s canFam3.chr16 16881507 17 - 59632846 TTCACACCTGGGCTTTC- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1388632 18 - 2520184 TTCACATCCGGGCTTTTT i dasNov3.JH570353 I 1 C 0 e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931660 21 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2548.000000 s hg38.chr4_KI270789v1_alt 49428 1 + 205944 A s panTro5.chr4 192841730 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726300 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762358 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648919 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s mm10.chr8 86519521 1 - 129401213 A i mm10.chr8 C 0 I 3 s canFam3.chr16 16881524 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388650 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189569782 1 - 190850796 I e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054757 0 - 14256875 C e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879092 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=5050.000000 s hg38.chr4_KI270789v1_alt 49429 3 + 205944 CAA s panTro5.chr4 192841731 3 + 194502333 CAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726301 3 + 195804263 CAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762359 3 + 4876863 CAA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187879092 3 + 189454096 TAA i macFas5.chr5 C 0 C 0 s mm10.chr8 86519525 3 - 129401213 TAG i mm10.chr8 I 3 C 0 s canFam3.chr16 16881525 3 - 59632846 TAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388651 3 - 2520184 CAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189569782 1 - 190850796 I e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054757 0 - 14256875 C e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1911.000000 s hg38.chr4_KI270789v1_alt 49432 1 + 205944 T s panTro5.chr4 192841734 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726304 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762362 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s mm10.chr8 86519528 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr16 16881528 1 - 59632846 T i canFam3.chr16 C 0 I 215 s dasNov3.JH570353 1388654 1 - 2520184 T i dasNov3.JH570353 C 0 I 199 e calJac3.chr3 189569782 1 - 190850796 I e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054757 0 - 14256875 C e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=8526.000000 s hg38.chr4_KI270789v1_alt 49433 15 + 205944 tgtagggaccagccc s panTro5.chr4 192841735 15 + 194502333 tgtagggacaagccc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726305 15 + 195804263 tgtagggacaagccc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762363 14 + 4876863 tgta-ggacaagccc i gorGor5.CYUI01015356v1 C 0 C 0 s mm10.chr8 86519529 15 - 129401213 TGTAAAGACCCTCCC i mm10.chr8 C 0 I 348 e calJac3.chr3 189569782 1 - 190850796 I e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054757 0 - 14256875 C e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=524573.000000 s hg38.chr4_KI270789v1_alt 49448 984 + 205944 cacagggtcggagggtttttctccccgtgtgcggagatgagacattgtagaaataaagacacaagacaaagagataaaagaaaagacagctgggcctgggggaccactaccaccaagatgcggagaccggtagtggccctgaatgcctggctgcgctgttatttattggatacaaggcaaaaggggcagggtaaggagtgtgagtcatctctaatgattgacaaggtcacatgagtcatgtgtccactggacagggggcccttccctgtttggcagccgaggtggagagacagagagagagagaggacacagcctacgccattatttcttcatatcagaggtttttagtactttcactaattttgctacggctatctagaaggcagagccaggtgtacaggatggaacataaaagtggactaggagtgtgaccactaaagcacagcatcacagggagatggttaggcctccagataactgtgggcaggcctgactgatgtcaggccctccactagaggtggaggagtagagtcttctctaaactccaccagggaaagggagactccctttcccagtctgctaagtagtgggtgtttttccttggcactgacgctaccgctagaccacagtccacttggcaacgggcgtcttcccagacgctggcgttatcactagaccaaggagccctctggtggccctgtctgggcgtgacagaaggctcgcattcttgtcttctggtcacttctcactatg----------tcctgtctctgtatggcctagtttttcctaggttatgatcatagagc-aaggattattataatattggaataaagagtaattgctacaaactaatgattaatgatattcatatataatcatatctatgatctatatctagtataactattcttattttatatattttattatactggaacagcttgttgccttggtctcttgcctcggcacctgggtggcttgccgcccaca s panTro5.chr4 192841750 989 + 194502333 cacagggtcggtgggtttttctccccatgtatggagatgagacattgtagaaataaagacacaagacaaagagataaaagaaaagacagctgggtctgggggaccactaccatcaagatgcggagactggtagtggccccgaatgcctggctgcactgttatttattggatacaaggcaaaaggggcagggtaaggagtgtgagtcatctctaatgattgacaaggtaacatgagtcatgtatccactggacaggaggcccttccctgtttggcagccgaggtggagagac--agagagagagaggacacagcctatgccattatttcttcatatcagaggtttttagtactttcactaattttgctactgctctctggaaggcagagccaggcatacaggatggaacataaaagcagactaggagtgtgaccactgaagcacagcatcacagggagatggttaggcctccagataactgtgggcaggcctgactgatgtcaggccctccacaagaggtggaggagtagagtcttctctaaactctgccagggaaagggagactccctttcccagtctgctaagtagtgcgtgtttttctttggcactgatgctactgctagaccacagtctgcttggcaatgggcgtcttcccagacgctggtgttaccactagaccaaggagccctctggtggccctgtctgggcgtgacagaaggctcgcactcttgtcttctggtcacttctcactatgtctcctcagctcctatctctgtatggcctggtttttcctaggtt---attatagagc-aaggattattataatattggaataaagagtaattgctacaaactaattattaatgatattcatatataatcatatctatgatctatatctagtataactattcttattttatatattttattatactggaacagcttgttgccttggtctcttgcctcagcacctgggtggcttgccgcccaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192726320 989 + 195804263 cacagggtcggtgggtttttctccccatgtatggagatgagacattgtagaaataaagacacaagacaaagagataaaagaaaagacagctgggtctgggggaccactaccatcaagatgcggagactggtagtggccccgaatgcctggctgcactgttatttattggatacaaggcaaaaggggcagggtaaggagtgtgagtcatctctaatgattgacaaggtaacatgagtcatgtatccactggacaggaggcccttccctgtttggcagccgaggtggagagac--agagagagagaggacacagcctatgccattatttcttcatatcagaggtttttagtactttcactaattttgctactgctctctggaaggcagagccaggcatacaggatggaacataaaagcagactaggagtgtgaccactgaagcacagcatcacagggagatggttaggcctccagataactgtgggcaggcctgactgatgtcaggccctccacaagaggtggaggagtagagtcttctctaaactctgccagggaaagggagactccctttcccagtctgctaagtagtgcgtgtttttctttggcactgatgctactgctagaccacagtctgcttggcaatgggcgtcttcccagacgctggtgttaccactagaccaaggagccctctggtggccctgtctgggcgtgacagaaggctcgcactcttgtcttctggtcacttctcactatgtctcctcagctcctatctctgtatggcctggtttttcctaggtt---attatagagc-aagtattattataatattggaataaagagtaattgctacaaactaattattaatgatattcatatataatcatatctatgatctatatctagtataactattcttattttatatattttattatactggaacagcttgttgccttggtctcttgcctcagcacctgggtggcttgccgcccaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3762377 978 + 4876863 cacagggtcggtggg-ttttctccctgtgtgtggagatgagacattgtagaaataaagacacaagacaaagagataaaagaaaagacagctgggcctgggggaccactaccaccaagatgcggagactggtagtggccccgaatgcctggctgcgctgttatttattggatacaaggcaaaaggggcagggtaaagagtgtgagtcatctctaatgattgacaaggtcacgtgagtcatgtgtccactggacagggggcccttccctgtttggcagccgaggtggagagac------agagagaggacacagcctacaccattatttcttcatatcagaggtttttagtactttcactgattttgctactgctatctagaaggcagagccaggtgtacaggatggaacataaaagcagactaggagtgtgaccactgaagcacagcatcacagggagatggtcaggcctccagataactgtgggcaggcctgactgatgtcaggccctccactagaggtggaggagtagagtcttctctaaactctgccagggaaagggagactccctttcccagtctgctaagtagtgggtgtttttccttggcactgacgctaccgctagaccacagtccacttggcaacgggcgtcttcccagacgctggcgttatcactagaccaaggagccctctggtggccctgtctgggcgtgacagaaggctcgcactcttgtcttctggtcacttctcactatg----------tcctatctctgtatggcctggtttttcctaggttatgatcatacagcgagggattattataatattggaataaagagtaattgctacaaactaatgattaatgatattcatatataatcatatctatgatctatatctagtataactattcttattttatatattttattatactggaacagcttgttgccttggtctcttgcttcggcacctgggtggcttgccgcccaca i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189569782 1 - 190850796 I e cebCap1.NW_016107886v1 943702 38 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054757 0 - 14256875 C e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 50432 1 + 205944 T s panTro5.chr4 192842739 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727309 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763355 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13054757 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943740 1 - 2196201 T i cebCap1.NW_016107886v1 I 38 C 0 e calJac3.chr3 189569782 1 - 190850796 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 50433 1 + 205944 G s panTro5.chr4 192842740 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727310 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763356 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189569783 1 - 190850796 G i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13054758 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943741 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e nomLeu3.chr7b 112648920 0 + 115148730 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=2800.000000 s hg38.chr4_KI270789v1_alt 50434 1 + 205944 C s panTro5.chr4 192842741 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727311 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763357 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648920 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189569784 1 - 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054759 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943742 1 - 2196201 C i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815266 23 + 2368649 I e manLeu1.NW_012102221v1 2688605 22 - 2847728 I e chlSab2.chr7 134255383 23 + 135778131 I e cerAty1.NW_012001672v1 3296473 20 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e rheMac8.chr5 188931660 21 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=14196.000000 s hg38.chr4_KI270789v1_alt 50435 2 + 205944 AA s panTro5.chr4 192842742 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727312 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763358 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648921 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931681 2 + 190429646 AA i rheMac8.chr5 I 21 C 0 s cerAty1.NW_012001672v1 3296493 2 + 4669795 AA i cerAty1.NW_012001672v1 I 20 C 0 s chlSab2.chr7 134255406 2 + 135778131 AA i chlSab2.chr7 I 23 C 0 s manLeu1.NW_012102221v1 2688627 2 - 2847728 AA i manLeu1.NW_012102221v1 I 22 C 0 s colAng1.NW_012116221v1 815289 2 + 2368649 AA i colAng1.NW_012116221v1 I 23 C 0 s calJac3.chr3 189569785 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054760 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943743 2 - 2196201 AA i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879095 0 + 189454096 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=1307559.000000 s hg38.chr4_KI270789v1_alt 50437 179 + 205944 TAGCTTTCTAGCTATTTCTTCTGTAGCATATAAG-AGttcagcaaacatttactgggtcccaatcttgtaacaga--tactcttatagatcctagaaatcccaaga-taaataaaacatgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcataaaGACGCATGACACAGA s panTro5.chr4 192842744 179 + 194502333 TAGCTTTCTAGCTATTTCTTCTGTAGCATATAAG-AGTtcagcaaacatttactgggtccccatcttgtaacaga--tactcttacagatcctagaaatcccaaga-taaataaaacatgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcataaagacgCATGACACAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727314 179 + 195804263 TAGCTTTCTAGCTATTTCTTCTGTAGCATATAAG-AGTtcagcaaacatttactgggtccccatcttgtaacaga--tactcttacggatcctagaaatcccaaga-taaataaaacatgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcataaagacgCATGACACAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763360 179 + 4876863 TAGCTTTCTAGCTATTTCTTCTGTAGCATATAAG-AGttcagcaaacatttactggggcccaatcttgtaacaga--tactcttatagatcctagaaatcccaaga-taaataaaacacgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcataaagactcatgacacaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112648923 179 + 115148730 TAGCTTTCTAGCTATTTCTTCTTTAGCATATAAG-AGttcagcaaacatttactgggtcccaatcttctaacaga--tacttttagagatcctagaaatcccaaga-taaataaaacatgatttttgacccaaaatgcttccaatgaatagaagaaacaatgcataaagacacaTGACACAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188931683 180 + 190429646 TAGCTTTCTAACTATTTCTTCTTTAGCATATAAG-AGttcagcaaacatttactgggtcccaatcttctaacagatatactcttatagatcctagaaatcccaaga-taaataaaacgtgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcat-aagacacatgaCACAGA i rheMac8.chr5 C 0 I 302 s macFas5.chr5 187879095 180 + 189454096 TAGCTTTCTAACTATTTCTTCTTTAGCATATAAG-AGTTCAGCAAACATTTACTGGGTCCCAATCTTCTAACAGATGTACTCTTATAGATCCTAGAAATCCCAAGA-TAAATAAAACATGATTCTTGACCCAAAATGCTTCCAATGAATAGAAGAAACAATGCAT-AAGACACATGACACAGA i macFas5.chr5 C 0 I 4 s cerAty1.NW_012001672v1 3296495 177 + 4669795 TAGCTTTCTAACTATTTCTTCTTTAGCATATAAG-AGttcagcaaacatttactgggtcccaatcttctaacaga--tactcttatagatcctagaaatcccaaga-taaataaaacatgattcttgacccaaaatgcttccaatgaatagaagaagc-atgcat-aagacacatgaCACAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255408 175 + 135778131 TAGTTTTCTAACTAT---TTCTTTAGCATATAAG-AGTTCAGCAAACATTTACTGGGTCCCAATCTTCTAACAGA--TACTCTTACAGATCCTAGAAATCCCAAGA-TAAATAAAACATGATTCTTGACCCAAAATGCTTCCAATGAATAGAAGAAACAATGCAT-AAGACACATGACACAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2688629 178 - 2847728 TAGCTTTCTAACTATTTCTTCTTTAGCATATAAG-AGttcagcaaacatttactgggtcccaatcttctaacaga--tactcttatagatcctagaaatcccaaga-taaataaaacatgattcttgacccaaaatgcttccaatgaatagaagaaacaatgcat-aagacacatgacacaGA i manLeu1.NW_012102221v1 C 0 M 1300 s colAng1.NW_012116221v1 815291 177 + 2368649 TAGCTTTCTAACTATTTCTTCTTTAGCATATAAG-AGTTCAGCAAACATTTACTGGGTCCCAATCTTCTAACAGA--TACTCTTATAGATCCCAGAAATCCCAAGA-TAAATAAAACATGATTCTTGACCCAAAATGCTTCCAATGAATAGAAGAAAC-ATGCAT-AAGACACATGACACAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569787 180 - 190850796 TAGCTTTCTAGCTATTTCTTCTTTAGCGTATAAGAAGTTCTGCAAACAATTACTGGGTCCCAGTTTTCTAACAGA--TACTCTTATagatcttagaaatcctatga-taaataaaacatgattcttgacccaaaatgcatctagtgacgagaagaaacagtgcataaagacacatgacacata i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054762 180 - 14256875 TAGCTTTCTAGTTATTTATTCTTTAGCATATTAGAAGttctgcaaacaattactggctcccaatcttctaacaga--tactcttatagatcctagaaatcctatga-taaataaaacatgattcctgacccaaaatgcttccagtgaagagaagaaacagtgcataaagacacatgacacata i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943745 181 - 2196201 TAGCTTTCTAGCTATTTCTTCTTTAGCGTATAAGAAGTTCTGCAAACAATTACTGGGTCCCAATCTTCTAACAGA--TACTTTTATAGATCCTAGAAATCCTATGATTAAAAAACACATGATTCTTGACCCAAAATGCTTCCAGTGAAGAGAAGAAACAACGCGTAAAGACAGGTGACACATA i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=9339.000000 s hg38.chr4_KI270789v1_alt 50616 2 + 205944 AA s panTro5.chr4 192842923 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727493 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763539 2 + 4876863 aa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649102 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879279 1 + 189454096 -g i macFas5.chr5 I 4 I 1 s cerAty1.NW_012001672v1 3296672 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 I 262 s chlSab2.chr7 134255583 2 + 135778131 AA i chlSab2.chr7 C 0 I 4 s colAng1.NW_012116221v1 815468 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569967 2 - 190850796 aa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054942 2 - 14256875 aa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943926 2 - 2196201 AA i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=44072.000000 s hg38.chr4_KI270789v1_alt 50618 17 + 205944 CAGTATTtt--tccttcct s panTro5.chr4 192842925 17 + 194502333 CAGTATTTt--tccttcct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727495 17 + 195804263 CAGTATTTt--tccttcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763541 17 + 4876863 cagtatttt--tccttcct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649104 17 + 115148730 CAGTATTAt--ttatttat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879281 17 + 189454096 ctgtctttt--tctttctt i macFas5.chr5 I 1 C 0 s chlSab2.chr7 134255589 17 + 135778131 ctttctttc--tctttctt i chlSab2.chr7 I 4 C 0 s colAng1.NW_012116221v1 815470 19 + 2368649 CAGtctttccttccttcct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189569969 13 - 190850796 cagtgtttt--tctt---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054944 17 - 14256875 cagtgtttt--tcttttct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 943928 17 - 2196201 CAGTGTTTT--TCCTTTCT i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3276.000000 s hg38.chr4_KI270789v1_alt 50635 1 + 205944 t s panTro5.chr4 192842942 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727512 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763558 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649121 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879298 1 + 189454096 t i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134255606 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815489 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 943945 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 I 742 e calJac3.chr3 189569982 0 - 190850796 C e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=5709.000000 s hg38.chr4_KI270789v1_alt 50636 5 + 205944 ctttc s panTro5.chr4 192842943 5 + 194502333 ccttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727513 5 + 195804263 ccttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763559 5 + 4876863 ccttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649122 4 + 115148730 tatt- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879299 5 + 189454096 ctttc i macFas5.chr5 C 0 I 5 s chlSab2.chr7 134255607 5 + 135778131 ctttc i chlSab2.chr7 C 0 I 65 s colAng1.NW_012116221v1 815490 5 + 2368649 ctttc i colAng1.NW_012116221v1 C 0 I 150 e calJac3.chr3 189569982 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=18877.000000 s hg38.chr4_KI270789v1_alt 50641 27 + 205944 cttccttccttccttcctttct----------------------------t--tttc s panTro5.chr4 192842948 42 + 194502333 cttccttccttccttccttccttccttccttccttTC-------------t--tttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727518 42 + 195804263 cttccttccttccttccttccttccttccttccttTC-------------t--tttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763564 55 + 4876863 cttccttccttccttccttccttccttccttccttccttccttccttcctt--tttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649126 5 + 115148730 --------------------------------------------------t--attt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879309 27 + 189454096 ctttctttctttgtttctttct----------------------------t--tttc i macFas5.chr5 I 5 C 0 s chlSab2.chr7 134255677 29 + 135778131 cttccttccttccttccttcct----------------------------tccttcc i chlSab2.chr7 I 65 C 0 s calJac3.chr3 189569982 14 - 190850796 -------------ttcttttct----------------------------t--tttc i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e colAng1.NW_012116221v1 815495 150 + 2368649 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=9693.000000 s hg38.chr4_KI270789v1_alt 50668 6 + 205944 tttctt s panTro5.chr4 192842990 6 + 194502333 tttctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727560 6 + 195804263 tttctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763619 6 + 4876863 tttctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649131 6 + 115148730 tttctg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187879336 6 + 189454096 tttctt i macFas5.chr5 C 0 I 185 s chlSab2.chr7 134255706 6 + 135778131 ttcctt i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e colAng1.NW_012116221v1 815495 150 + 2368649 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=-840.000000 s hg38.chr4_KI270789v1_alt 50674 7 + 205944 ---------------agattgg s panTro5.chr4 192842996 7 + 194502333 ---------------agatggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727566 7 + 195804263 ---------------agatggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763625 7 + 4876863 ---------------agatggg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649137 7 + 115148730 ---------------agacaga i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134255712 15 + 135778131 NTTCCCCTCCCCTCC------- i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e colAng1.NW_012116221v1 815495 150 + 2368649 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e cerAty1.NW_012001672v1 3296674 262 + 4669795 I e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879342 185 + 189454096 I e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2800.000000 s hg38.chr4_KI270789v1_alt 50681 1 + 205944 g s panTro5.chr4 192843003 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727573 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763632 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649144 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3296936 1 + 4669795 g i cerAty1.NW_012001672v1 I 262 C 0 s chlSab2.chr7 134255727 1 + 135778131 g i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815645 1 + 2368649 g i colAng1.NW_012116221v1 I 150 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879342 185 + 189454096 I e rheMac8.chr5 188931863 302 + 190429646 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3276.000000 s hg38.chr4_KI270789v1_alt 50682 1 + 205944 t s panTro5.chr4 192843004 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727574 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763633 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649145 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932165 1 + 190429646 t i rheMac8.chr5 I 302 C 0 s cerAty1.NW_012001672v1 3296937 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255728 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815646 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879342 185 + 189454096 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1127990.000000 s hg38.chr4_KI270789v1_alt 50683 324 + 205944 ctcactccgtcacccaggataaagtgcagtggcacagtcttggctcgctgcaacctccgactcctgagttcaagtgattctcctgccttagcctcctgagtagctgggattacagccgtgcaccaccacgcccggccaa-tttttttgta-tttttagtagagac-gggttttgccatgttggccagggtggtctccaactcctgacctcaggttatctgcctgccttggcctcccaaaatgctgggattacaggcgtgagccactgtgcctggcATAAACAG-TA-TTTTTCATAGCATGGGATATA--AGTGACGACAGCAACAGCAAC--- s panTro5.chr4 192843005 327 + 194502333 ctcactccatcacccaggctaaagtgcagtggtgcagtctcagctcgctgcaacctctgactcccgagttcaagtgattctcctgccttagcctcctgagtagctgggattatagccgtgcaccaccacgcccggccaa--ttttttgta-tttttagtagagacggggttttgccatgttggccagggtggtctccaactcctgacctcaggttatctgactgccttggcctcccaaagtgctgggattacaggtgtgagccactgtgcccggcATAAACAG-TA-TTTTTCATAGCATGGGATATA--AGTGACGACAGCAACAGCAACttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727575 325 + 195804263 ctcactccatcacccaggctaaagtgcagtggtgcagtctcagctcgctgcaacctctgactcccgagttcaagtgattctcctgccttagcctcctgagtagctgggattatagccgtgcaccaccacgcccggccaa--ttttttgta-tttttagtagagacggggttttgccatgttggccagggtggtctccaactcctgacctcaggttatctgactgccttggcctcccaaagtgctgggattacaggtgtgagccactgtgcccggcATAAACAGTTA-TTTTTCATAGCATGGGATATA--AGTGACGACAGCAACAGCTAA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763634 328 + 4876863 ctcactccatcacccaggctaaagtgcagtggcacagtctcagctcgctgcaacctccgactcccgaattcaagtgattctcctgccttagcctcctgagtagctgggattacagccgtgcaccaccacgcccggccaa-tttttttgta-tttttagtagagacggggttttgccatgttggccagggtggtctccaactcctgacctcaggttatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgtgcctggcataaacag-tattttttcatagcatggaatata--agtgacgacagcaacagcaac-tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649146 326 + 115148730 cttgctctgtcacctaggctggagtgcaatgacgcgatcttggctcactgcaacttctgactcccaagttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtgtgccaccacgcctggccaattttttttgta-tttttagtagagacggggttttgccatgttggccagggtggtctcaaactcctgccctcaggatatctgcctgccttggcctcccaaactgctgggattagaggcgtgaggcactgtgcctggcATAAACAG-TA-TTTTTCATAGCGTGGGATATA--AGCGATGACAGCAACGGCAAC--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932166 326 + 190429646 ctcactctgtcacccaggctggagtgcagtggtacgaacttggctcactgcaacctctgactcc-gagttcaagcgattctcctgcctcagcctcccgagtagct-ggattacaggcatgcgccaccacgcctggccac-tttttttgtattttttagtagagacagggtttcgccatgttggccagggtggtctcaaactcctgatctcaggatatctgcctgccttggcctcccaaagtgtcgggattacaggcatgagccactgtgcctggTATAAACAG-TA-TTTTTCATAGCATGGGATATAAGAGCGATGACAGCAACAGCAAC--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187879527 325 + 189454096 ctcactctgtcacccaggctggagtgcagtggtacgaacttggctcactgcaacctctgactcc-gagttcaagcgattctcctgcctcagcctcccgagtagct-ggattacaggcatgcgccaccacgcctggccac-attttttgta-tttttagtagagacagggtttcgccatgttggccagggtggtctcaaactcctgatctcaggatatctgcctgccttggcttcccaaagtgtcgggattacaggcatgagccactgtgcctggTATAAACAG-TA-TTTTTCATAGCATGGGATATAAGAGCGATGACAGCAACAGCAAC--- i macFas5.chr5 I 185 C 0 s cerAty1.NW_012001672v1 3296938 323 + 4669795 ctcactctgtcacccaggctggagtgcagtggcacgaacttggctcacagcagcctctgactcc-gagttcaagtgattctcctgacttagcctcccgagtagct-ggattacaggcatgcgctaccacgcctggccac-tttttttgta-tttttagtagagacagggtttcaccatgttggccagcgtggcctcaacctcctgatctcaggatatctgcctgccttggcctcccaaagtgtcgggattacaggcatgagccactgtgcctggTATAAAGAG-TA-TTTTTCATAGCATGGGATATA--AGCGATGACAGCAACAGCAAC--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134255729 319 + 135778131 cttactctgtcacccaggctggaatacagtggcacgaacttggctcactgcaacctctgactcc-gagttcaagtgattctcctgcctcagcctcccgagtagct-ggattacaggcatgc----ccacgcctggccac-tttttttgta-tttttagtagagacggggtttcgccatgttggccagagtggtctcgaactcctgatctcaggatatctgcctgccttggcctcccaaagtgtcgggattacaggcgtgaatcactgtgcctggTATAAACAG-TG-TTTTTCATAGCATGGGATATA--AGCGATGACAGTAACAGCAAC--- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815647 323 + 2368649 ctcactctgtcacccaggctggagtgcagtggcatgaacttgtctcactgcaatctctgactcc-gagttcaagcaattctcctgcctcagcctcccgagtagct-ggattacatgcatgcgccactacacctggccac-tttctttgta-tttttagtagagacagggtttcgccatgttggccagggtggtctcgaactcctgatctcaggatatctgcctgccttggcctcccaaagtgtcaggattacaggcatgggccactgtgcctggTATAAACAG-TT-ATTTTCATAGCATAGGATATA--AGCGATGACAGCAACAGCAAC--- i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13054961 0 - 14256875 C e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=18548.000000 s hg38.chr4_KI270789v1_alt 51007 10 + 205944 ttttttt--------------------ttt s panTro5.chr4 192843332 10 + 194502333 ttttttt--------------------ttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727900 5 + 195804263 -----CT--------------------TTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763962 10 + 4876863 tttttgt--------------------ttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649472 10 + 115148730 Atttttt--------------------ttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932492 10 + 190429646 Ctttttt--------------------ttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187879852 10 + 189454096 Ctttttt--------------------ttt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297261 10 + 4669795 AAttttt--------------------ttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256048 30 + 135778131 ATTttttgtttgttttttttgttgttgttt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815970 10 + 2368649 ATTTTTT--------------------TTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13054961 10 - 14256875 ttcctta--------------------ttt i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189569996 0 - 190850796 C e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=13156.000000 s hg38.chr4_KI270789v1_alt 51017 3 + 205944 ttt s panTro5.chr4 192843342 3 + 194502333 ttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727905 3 + 195804263 TTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763972 3 + 4876863 ttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649482 3 + 115148730 ttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932502 3 + 190429646 ttt i rheMac8.chr5 C 0 I 11 s macFas5.chr5 187879862 3 + 189454096 ttt i macFas5.chr5 C 0 I 111 s cerAty1.NW_012001672v1 3297271 3 + 4669795 ttt i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134256078 3 + 135778131 ttt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 815980 3 + 2368649 TTT i colAng1.NW_012116221v1 C 0 M 1548 s calJac3.chr3 189569996 3 - 190850796 tcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054971 3 - 14256875 tcc i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=13159.000000 s hg38.chr4_KI270789v1_alt 51020 4 + 205944 gaga s panTro5.chr4 192843345 4 + 194502333 gaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727908 4 + 195804263 GAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763975 4 + 4876863 gaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649485 4 + 115148730 gaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932516 4 + 190429646 gaga i rheMac8.chr5 I 11 C 0 s cerAty1.NW_012001672v1 3297275 4 + 4669795 gaga i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134256081 4 + 135778131 gtga i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189569999 4 - 190850796 aaga i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054974 4 - 14256875 aaga i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e macFas5.chr5 187879865 111 + 189454096 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=59966.000000 s hg38.chr4_KI270789v1_alt 51024 15 + 205944 tggagtcttgcttgt s panTro5.chr4 192843349 15 + 194502333 tggagtcttgcttgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727912 15 + 195804263 TGGAGTCTTGCTTGT i panPan2.chr4 C 0 I 22 s gorGor5.CYUI01015356v1 3763979 15 + 4876863 tggagtcttgcttgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649489 15 + 115148730 tggagtcttgcttgg i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 188932520 15 + 190429646 tagagtcttgcttgg i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187879976 15 + 189454096 TAgagtcttgcttgg i macFas5.chr5 I 111 I 1 s cerAty1.NW_012001672v1 3297279 15 + 4669795 tggagtcttgcttgg i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134256085 15 + 135778131 tggagtcttgcttag i chlSab2.chr7 C 0 I 1 s calJac3.chr3 189570003 15 - 190850796 cagagtcttgctctg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054978 15 - 14256875 cagagtcttgctctg i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=856622.000000 s hg38.chr4_KI270789v1_alt 51039 262 + 205944 tacccaggctggagagcagtggtgtgatctcggctcactgcaacctccacctcccaggttctagcgattctggttcctcagcttccccagtaactgggtttacaggcgcccgccacc-atgtgcca---gctaatttttgta-ttttcagtagagatggggtttcacc--atattgcccaggctggtctcaaactcctgacctcatgatccacctgccttggcctcccaaagtgctgggattacaggtgtgagccaccgcacccagccA s panTro5.chr4 192843364 262 + 194502333 cacccaggctggagagcagtggtgtgacctcggctcactgcaacctccacctcccgggttcaagcgattctggttcctcagcctccccagtaactgggtttacaggtgcatgccacc-acgtgcca---gctaatttttgta-tttttagtagagacggggtttcacc--atattgcccaggctggtctcaaactcctgacctcatgatccacctgccttggactcccaaagtgctgggattagaggtgtgagccaccacacccagccA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3763994 262 + 4876863 cacccaggctggagagcagtagtgtgatctcggctcactgcaacctccacctcccgggttcaagcgattctggttcctcagcttccccagtaactgggtttacaggcaccagccacc-acatgcca---gctaatttttgta-tttttagtagagatggggtttcacc--atattgcccaggctggtctcaaactcctgacctcatgatccacctgccttggcctcccaaagtgctgggattacgggtgtgagccaccgcacccagcca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649505 265 + 115148730 tgcccaggctggcgtgcagtggtgtgaccttggctcactgctacctccacctcccaggttcgagtgattctggttcctcagcctcctgagtagctgggattacaggtgcctgccacc-acgtgccagctgctaatttttgta-tttttagtagagacggtgtttcacc--atattgcccaggctggtctcaaactcctgacctcgtgatctgcctgccttggcctcccaaactgctgggattacaggtgtgagccactgcacccagccA i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188932536 262 + 190429646 tgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctccagggttcaagtgattctggttcctcagcctccggaatagctaggattataggtgcccgccaccaacatgctg---gctaatttttgta-tttttagtagagatggggttttacc--atattgcccagactgttctcaaactcctgacctggtgatctgcctgccttggctt-ccaaactgctgggattacaggtgtgagccaccgcagccagccA i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187879992 263 + 189454096 tgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctccagggttcaagtgattctggttcctcagcctcccgaatagctaggattataggtgcccgccaccaacatgctg---gctaatttttgta-tttttagtagagatggggttttacc--atattgcccagactgttctcaaactcctgacctggtgatctgcctgcctcagcttcccaaactgctgggattacaggtgtgagccaccgcagccagccA i macFas5.chr5 I 1 C 0 s cerAty1.NW_012001672v1 3297295 263 + 4669795 tgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctccagggttcaagtgattctggttcctcagcctcccaaatagctaggattataggtgcccgccaccaacatgctg---gctaatttttgta-tttttagtagagatggggtttcacc--atattgcccagactggtctcaaactcctgacctggtgacctgcctgcctcggcttcccaaactgctgggattacaggtgtgagccaccgcagccagccA i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134256101 263 + 135778131 tgctcaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctccagggttcaagtgattctggttcctcagcctcccgaatagctgggattataggtgcccgccaccaatgtgctg---gctaatttttgta-tttttagtagagatggggtttcacc--atgttgctcagactggtctcaaactcctgacctagtgatctgcctgcctcggcttcccaaactgctgggattacaggtgtgagccaccacacccagccA i chlSab2.chr7 I 1 C 0 s calJac3.chr3 189570018 264 - 190850796 tctccaggctggagtgcagtggcacgatctcggctcactgcaacctccccttcctgggttcaagcgattctcttgcctcagcctctcaaataactgggactatacgcactggccacc-aagc-ctg---gcaaatttttgtattttttagtagagacggggtttcaccatatattggccaggctcgtctcaaactctcggcctcgtgatttacccacctcggcctcacaaagttctgggattacaggcatgagccatcgcacctggcca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13054993 264 - 14256875 ttgccaggctggagtgcagtgacacaatctcagttcactgcaacctctgcctcctgggttcaagtgattctgttgcctcagcctctcacgtagctggaactacaggtgctggccacc-aagc-ctg---gcaaatttttgggttttttagtagagacggggtttcaccatatattggccaggttcgtctcaaactcttgacctcatgatttacccacctcggcctcccaaagtcctgggatgacaggcatgagccaccgcacctggcca i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1388655 199 - 2520184 I e canFam3.chr16 16881529 215 - 59632846 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e panPan2.chr4 192727927 22 + 195804263 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=4664.000000 s hg38.chr4_KI270789v1_alt 51301 1 + 205944 A s panTro5.chr4 192843626 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764256 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649770 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932798 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880255 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297558 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256364 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189570282 1 - 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055257 1 - 14256875 a i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16881744 1 - 59632846 a i canFam3.chr16 I 215 C 0 s dasNov3.JH570353 1388854 1 - 2520184 a i dasNov3.JH570353 I 199 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e manLeu1.NW_012102221v1 2688807 1300 - 2847728 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e panPan2.chr4 192727927 22 + 195804263 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=295093.000000 s hg38.chr4_KI270789v1_alt 51302 66 + 205944 TGACAGCAA----------------------------------------------------------------CATTCAAGgggtgctctgagagcacactgaggtgca------cttagcctgtcgtgaaagttc s panTro5.chr4 192843627 66 + 194502333 TGACAGCAA----------------------------------------------------------------CATTCAAGgggtactctgagagcacactgaggtgca------cttagcctgtcgtgaaagttc i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764257 66 + 4876863 tgacagcaa----------------------------------------------------------------cattcaaggggtgctctgagagcacactgaggtgca------cttagcctgtcgtgaaagttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649771 66 + 115148730 TGACAGCAA----------------------------------------------------------------CATTCCAagggtgctctgagagcacattgaggtgca------cttagcctgtcgtgaaagttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932799 63 + 190429646 TGATAGCAA----------------------------------------------------------------CATTCAA---GTGCTCTGCGGGCACACTGAGGTGCA------CTCAGCCTGTCATGAAAGTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880256 63 + 189454096 TGATAGCAA----------------------------------------------------------------CATTCAA---GTGCTCTGCGGGCACACTGAGGTGCA------CTCAGCCTGTCATGAAAGTTC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297559 127 + 4669795 TGACAGCAACATTGAAGTGCTCTGCGGGCGCACCGAGGTGCACTCAGCCTGTCGTGAAAGCCAGTGACAGCAGCATTCAG---GTGCTCTGCGGGCGCACCGAGGTGCA------CTCAGCCTGTCGTGAAAGCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256365 63 + 135778131 TGACAGCAA----------------------------------------------------------------CATTCAA---GTGCTCTGAGGGCACACTGAGGTGCA------CTGAGCCTGTCGTGAAAGTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690120 63 - 2847728 TGACAGCAA----------------------------------------------------------------CATTCAG---GTGCTCTGCGGGCGCACCGAGGTGCA------CTCAGCCTGTCGTGAAAGTTC i manLeu1.NW_012102221v1 M 1300 C 0 s calJac3.chr3 189570283 66 - 190850796 tgacggcaa----------------------------------------------------------------catttaaggggtgccccgagaacatgctgaggtgca------cttagcctgccatgaaagttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055258 66 - 14256875 tgacggcaa----------------------------------------------------------------catttaaggggtgccccgagaacacactgaggtgca------cttagcctgtcgtgaaagttc i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16881745 70 - 59632846 tgacagtaa----------------------------------------------------------------tattcaaaaggtactcagtgagcaca--gaggtacctttaatctcagcctgtcatgagagttc i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388855 70 - 2520184 tgatagcaa----------------------------------------------------------------tatccaaagggtaccccatgatcactgacaagtgca-cttatctcaaccagtcatgaaggtc- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e panPan2.chr4 192727927 22 + 195804263 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=473578.000000 s hg38.chr4_KI270789v1_alt 51368 99 + 205944 aagagatggttcttgaag-------ttgatggtcactgaatgcggttttgcaggaGATTGAATTTgaaaagctaccttaccttccgaggctgttcccagtgcaaat s panTro5.chr4 192843693 99 + 194502333 aagagagggttcttgaag-------ttgatggtcactgaatgcggttttgcaggaGATTGAATTTGAAAAGctaccttaccttccgaggctgttcacagtgcaaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192727949 99 + 195804263 AAGAGAGGGTTCTTGAAG-------TTGATGGTCACTGAATGCGGTTTTGCAGGAGATTGAATTTGAAAAGctaccttaccttccgaggctgttcacagtgcaaat i panPan2.chr4 I 22 C 0 s gorGor5.CYUI01015356v1 3764323 99 + 4876863 aagagagggttcttgaag-------ttgatggtcactgaatgcggttttgcaggaGATTGAATTTgaaaagctaccttaccttccgaggctgttcacagtgcaaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649837 106 + 115148730 aggagagggtccttgaagatggtcacTGAATGTCACTGAATGTGGTTTTGCAGGAGATTGAATTTgaaaggctaccttaccttctgaggctgttcgcaatgcaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932862 99 + 190429646 AGGAGAGGGTTCTTGAAG-------ATGATGGTCACTGAATGCAGTTTTGCAGGAGATTGAATTTTAAAAGctaccttaccttccgaggttgttcacaatgcaaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880319 99 + 189454096 AGGAGAGGGTTCTTGAAG-------ATGATGGTCACTGAATGCAGTTTTGCAGGAGATTGAATTTTAAAAGCTACCTtaccttccgaggttgttcacaatgcaaat i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297686 98 + 4669795 AGGAGAGGGTTCTTGAAC-------ATG-TGGTCACTGAATGCGGTTTTGCAGGAGATTGAATTTGAAAAGCTtccttaccttccaaggttgttcacaatgcaaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256428 99 + 135778131 AGGAGAGGGTTCTTGAAG-------ATGATGGTCACTGAATGTGGTTTTGCAGGAGATTGAATTTgaaaagctaccttaccttccgaggttgttcacaatgcaaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690183 98 - 2847728 AGGAGAGGGTTCTTGAAC-------ATG-TGGTCACTGAATGCGGTTTTGCAGGAGATTGAATTTGAAAAGCTtccttaccttccgaggttgttcacaatgcaaat i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570349 92 - 190850796 aggggaggattc-tgaag-------gtgatggtcgctgaacATGGTGTAGCAGGAGACTGAGTTTGAAAAGCT------ACTTCTGAGGCTGTTCACCATGCTGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055324 98 - 14256875 aggcgaggattc-tgaag-------gtgatgGTTGCTGAATGCAGTGTAGCAGGAGACTCAGTTTGAAAAGCTGCCTTAACTTCTGAGGCTGCTCACTATGCTGCT i saiBol1.JH378165 C 0 I 26 s canFam3.chr16 16881815 50 - 59632846 tggacagtattgtggaag-------ggg-tggtca---------gttttgaaggggattgagtttga--------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1388925 56 - 2520184 aggagagtgtccttgaag-------gagatggcc-ctgaaggtggctttgaagg-gactgagttt----------------------------------------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=219283.000000 s hg38.chr4_KI270789v1_alt 51467 51 + 205944 atccttgaaaagatcattcaaaaACATGTGAAAAGAGTGTTTCTGACGGAA s panTro5.chr4 192843792 51 + 194502333 atccttgagaagatcattcaaaaACATGTGAAAAGAGTGTTTCTGACGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728048 51 + 195804263 atccttgagaagatcattcaaaaACATGTGAAAAGAGTGTTTCTGACGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764422 51 + 4876863 atccttgaaaagatcattcaaaaACATGTGAAAAGAGTGTTTCTGACAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649943 51 + 115148730 atccttgacaagatcatttaaaaACATGTGAAAAGAATGTTTCTGATGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188932961 51 + 190429646 atccttgaaaagatcattcaaaaacacatgaaaagagtgtttctgATGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880418 51 + 189454096 atccttgaaaagatcattcaaaaaCACGTGAAAAGAGTGTTTCTGATGGAA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297784 51 + 4669795 atccttgaaaagatcattcaaaaaCACGTGAAAAGAGTGTTTCTGATGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256527 51 + 135778131 atcctcgaaaagatcattcaagaacaCGTGAAAAGAGTGTTTCTGATGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690281 51 - 2847728 atccttgaaaagatcattcaaaaaCACGTGAAAAGAGTGTTTCTGATGGAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570441 22 - 190850796 ---------------------------GTGTGCACAATGCT--GGGTGGGA i calJac3.chr3 C 0 C 0 s canFam3.chr16 16881865 37 - 59632846 --------------tacatgaaggcaggtgaaaagactatttctgacataa i canFam3.chr16 C 0 I 7 s dasNov3.JH570353 1388981 39 - 2520184 ------------agtatttgaagacatttaaaaagagtgtttctgacataa i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86519544 348 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055422 26 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=167039.000000 s hg38.chr4_KI270789v1_alt 51518 53 + 205944 --------GGACATATACA-GAAACA--TAAAATAGCATGATGT-GAATCAAGGAACTAAACACC s panTro5.chr4 192843843 53 + 194502333 --------GGACATATACA-GAAACA--TAAAATAGCACGATGT-GAATCAAGGAACTAAACACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728099 53 + 195804263 --------GGACATATACA-GAAACA--TAAAATAGCACGATGT-GAATCAAGGAACTAAACACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764473 53 + 4876863 --------GGACATATACA-GAAACA--TAAAATAGCACGATGT-GAATCAAGGAACTAAACACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112649994 53 + 115148730 --------GGACATACACA-GAAACA--TAAAGTAGCACGATGT-GAATCAAGGAACTAAACACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933012 48 + 190429646 --------GGACACAAAGA-GAAATA--TA-----GCGCGATGT-GAATCGAGGAACTAAACACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880469 48 + 189454096 --------GGACACAAAGA-GAAATA--TA-----GCGCGATGT-GAATCAAGGAACTAAACACA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297835 53 + 4669795 --------GGACACAAAGA-GAAACA--TAAGATGGCGCGATGT-GAATCAAGGAACTAAACACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256578 53 + 135778131 --------GGACACAAAGA-GAAACA--TAAGATAGCACGATGT-GAATCAAGGAACTAAACACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690332 53 - 2847728 --------GGACACAAAGA-GAAACA--TAAGATAGCGCGATGT-GAATCAAGGAACTAAACACA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570463 4 - 190850796 --------GGAA----------------------------------------------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 86519892 54 - 129401213 --------GAACAAATACA-GAGATGCTTGACAGAGTACAATTTCCGACCAAGAGACTAAACA-- i mm10.chr8 I 348 C 0 s canFam3.chr16 16881909 55 - 59632846 --------AAACAAACATAGGGAATA--CAAAATAGTAAAATATATAATGAAGGAACTAAACACA i canFam3.chr16 I 7 C 0 s dasNov3.JH570353 1389020 62 - 2520184 ggcaatgtaagcaaatataggaaaca--tgaaatagcatgtttcctaaccacagaa-taaaaaca i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055422 26 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=666765.000000 s hg38.chr4_KI270789v1_alt 51571 127 + 205944 AACTGCTGTTACTAGTTTGTGGAG-TTCCTTGTGTGGAGCAGTA----------GGAAGTTGAAGCTG----GAGTTTGCTATGCATGCTGCGTTAAGGAACTCAGATTTTAGCCTTTATGCCAGTTG--------CCTCCAGAC----------------------ttttt s panTro5.chr4 192843896 124 + 194502333 AACTGCTGTTA-TAGTTTGTGGAG-ATCCTTGTGTGGAGCAGTA----------GGAAGTTGAAGCTG----GAGGTTGCCATGCATGCTGCGTTAAGGAACTCAGATTTTAGCCTTTATGCCAGTTG--------CCTCCAGA------------------------tttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728152 123 + 195804263 AACTGCTGTTA-TAGTTTGTGGAG-CTCCTTGTGTGGAGCAGTA----------GGAAGTTGAAGCTG----GAGGTTGCCATGCATGCTGCGTTAAGGAACTCAGATTTTAGCCTTTATGCCAGTTG--------CCTCCAGA-------------------------ttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764526 128 + 4876863 AACTGCTGTTACTAGTTTGTGGAG-CTCCTTGTGTGGAGCAGTA----------GGAAGTTGAAGCTG----GAGGTTGCCATGCATGCTGCGTTAAGGAACTCAGATTTTAGCCTTTATGGCAGTTG--------CCTCCAGAC---------------------tttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650047 130 + 115148730 AACTGCTGTTACTAGTTTGTGGAG-TTCCTTGTGAGGAGCAGTA----------GGAAGCTGAAGCTG----GAGGCTGCTATGCATGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATGCCAGTTG--------CCTCCAGAC-------------------tttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933060 132 + 190429646 AACTGCTGTTACTAGTTTGTAGAG-TTCCTTGTGTGGAGCGACA----------GGAAGCTGAAGCTG----GAGGTTGCTATGCATGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATACTAGTTG---------CTCCAGAC----------------ttttttttttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880517 132 + 189454096 AACTGCTGTTACTAGTTTGTAGAG-TTCCTTGTGTGGAGCGACA----------GGAAGCTGAAGCTG----GAGGTTGCTATGCATGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATACTAGTTG---------CTCCAGAC----------------ttttttttttt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3297888 134 + 4669795 AACTGCTGTTACTAGTTTGTAGAG-TTCCTTGTGTGGAGCGACA----------GGAAGCTGAAGCTG----GAGGTTGCTATGCATGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATACTAGTTG---------CTCCAGACt--------------tttttttttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256631 149 + 135778131 AACTGCTGTTACTAGTTTGTAGAG-CTCCTTCTGTGGAGCGATA----------GGAAGCTGAAGCTG----GAGGTTACTATGCACGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATGCCAGTTG--------CCTCCAGACttttcttttttttttttcttttttttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690385 144 - 2847728 AACTGCTGTTACTAGTTTGTAGAG-TTCCTTGTGTGGAGCGACA----------GGAAGCTGAAGCTG----GAGGTTGCTATGCATGCCGTGTTAAGGAACTCAGATTTTAGCCTTTATACTAGTTG---------CTCCAGACt----tttttttttttttttttttttt i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570467 123 - 190850796 AACTGGTGTTACTAG-CTGTGGAG-TTCCTCGTGTGGGGTGGTA----------GGACGCTGAAGCTG----GAGGCTGCAATGCAGGCTGAGTGAAGGAACTCAGATTTG--TCTCTTCGCTGGTTG---------CTCCAGAC----------------------TTTTT i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13055448 125 - 14256875 ACCTGGTGTTACCAG-CTGTGGAG-TTCGTCGTGTGGGGTGGTG----------AGAAGCTGGCGTTG----GAGGCTGCAACGCAGGCTGAGTGAAGGAACTCAGATTTTC-TCTCTTCGCTGGTCA--------Cctccagac----------------------ttttt i saiBol1.JH378165 I 26 C 0 s mm10.chr8 86519946 125 - 129401213 AACTGTTATCACTACCATATCACA-CTCTTTGTGTAGAGTTGTA----------GGAAGATGATGCTGACACGAACTTTATGGATATACC------AGGTAGCTAAACTGTATCCTTTATGCTTATTG--------CCTCAATGT----------------------TTCTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16881964 133 - 59632846 -AACAATGTTACTAGGTTGTGAAG-CTCATTGAGTAGAGCAGTC----------AGACATTGAAGCTG----GAGCTTGCTTAGGGTGTCATGTTAAGGAACTCAG-TTGTATCCTTGATGCTTGCTAGATGCTCACCTCCAGAC----------------------GGTTT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1389082 136 - 2520184 aaccagtgttgcAAATTGGTGAAGATTCATTGTATGGAGTGATAAATCACCCAGGGCTATCCAAGCAG----GGGCTTGCTTTGCACGCTAC--TACAGAACTCAGGTTTTATCCTTCATCCTAGTTG--------CCTCCAGGC----------------------TTTTC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=5634.000000 s hg38.chr4_KI270789v1_alt 51698 1 + 205944 t s panTro5.chr4 192844020 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728275 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764654 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650177 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933192 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880649 1 + 189454096 t i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3298022 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256780 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690529 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13055573 1 - 14256875 t i saiBol1.JH378165 C 0 I 108 s mm10.chr8 86520071 1 - 129401213 T i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1389218 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189570590 1 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16882097 1 - 59632846 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=18172.000000 s hg38.chr4_KI270789v1_alt 51699 4 + 205944 tttt s panTro5.chr4 192844021 4 + 194502333 tttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728276 4 + 195804263 tttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764655 4 + 4876863 tttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650178 4 + 115148730 tttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933193 4 + 190429646 tttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880650 4 + 189454096 tttt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3298023 4 + 4669795 tttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256781 4 + 135778131 tttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690530 4 - 2847728 tttt i manLeu1.NW_012102221v1 C 0 C 0 s mm10.chr8 86520072 4 - 129401213 TGTG i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1389219 4 - 2520184 TTCT i dasNov3.JH570353 C 0 I 8 e calJac3.chr3 189570590 1 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16882097 1 - 59632846 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=27219.000000 s hg38.chr4_KI270789v1_alt 51703 8 + 205944 ttttagat s panTro5.chr4 192844025 8 + 194502333 ttttagac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728280 8 + 195804263 ttttagac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764659 8 + 4876863 ttttagat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650182 8 + 115148730 tcttagac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933197 8 + 190429646 tttgagac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880654 8 + 189454096 tttgagac i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3298027 8 + 4669795 tttgagac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256785 8 + 135778131 tttgagac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690534 8 - 2847728 tttgagac i manLeu1.NW_012102221v1 C 0 C 0 s mm10.chr8 86520076 8 - 129401213 TTATGGAT i mm10.chr8 C 0 I 664 e calJac3.chr3 189570590 1 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e canFam3.chr16 16882097 1 - 59632846 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=613778.000000 s hg38.chr4_KI270789v1_alt 51711 168 + 205944 ggagcctcgctctgttgcccaggctggagtccagtggtacaatctcggctcactggaacatccgcctcccaggttcaagcaattctctgcctctgcctccagagtagctaggactacaggcgcctgccaccatgcccagctaatttttgtatttttagtggaaacggg s panTro5.chr4 192844033 168 + 194502333 ggagcctctctctgttgcccaggctggagtgcagtggtacaatctcggctcactggaacctccgcctcccaggttcaagcaattctctgcctctgcctccagagtagctaggactacaggcgcctgccaccacacctggctaatttttgtatttttagtggaaacggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728288 168 + 195804263 ggagcctcactctgttgcccaggctggagtgcagtggtacaatctcggctcactggaacctccgcctcccaggttcaagcaattctctgcctctgcctccagagtagctaggactacaggcgcctgccaccacacctggctaatttttgtatttttagtggaaacggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764667 168 + 4876863 ggagcctcactctgttgcccaggctggagtgcagtggtacaatctcggctcactggaacctctgcctcccaggttcaagcaattctctgcctctgcctccagagtagctaggactacaggcgcctgccatcacacctggctaatttttgtatttttagtggaaacggg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650190 168 + 115148730 tgagcctcgctctgttgcccaggctggagtgcagtggtacaatcttggctcactggaacctccgcctcccaggttcaagcaattctctgcctcagcctccagagtagctgggactacaggcgcccaccaccacgcccggctaacttttgtatttttagtggaaacggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933205 168 + 190429646 agagcctcgatctgttgcccaggctggagtgcagtggcgcgatctcagctcattggaacctatgcctcctaggttcaagcaattttcttcctcagcctcctgagtagctgggattacaggtgcccgccaccatgctcagctaatttttgtatttttagtaccaacggg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880662 168 + 189454096 ggagcctcgatctgttgcccaggctggagtgcagtggcgcgatctcagctcattggaacctatgcctcctaggttcacgcaattttcttcctcagcctcctgagtagctgggattacaggtgcccgccaccatgctcagctaatttttgtatttttagtaccaacggg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3298035 168 + 4669795 ggagcctcgatctgttgcccaggctggagtgcagtggcgcgatctcagctcattggaacctatgcctcctaggttcaagcaattctctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgcttagctaatttttgtatttttagtaccaacggg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256793 168 + 135778131 ggagccttgatctgttgcccaggctggagtgcagtggtgcgatctcagctcattggaacctatgcttcccaggttcaagcaattctctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgttcagctaatttttgtatttttagtaccaatggg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690542 168 - 2847728 ggagcctcgatctgttgcccaggctggagtgcagtggcgcgatctcagctcattggaacctatgcctcctaggttcaagcaattctctgcctcagcctcctgagtagctgggattacaggtgcccgccaccatgctcagctaatttttgtatttttagtaccaacggg i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189570590 1 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e canFam3.chr16 16882097 1 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e macNem1.NW_012013133v1 24258660 0 - 25927173 C e otoGar3.GL873580 11190552 397 - 11315646 I a score=498372.000000 s hg38.chr4_KI270789v1_alt 51879 112 + 205944 gtttcaccctcttagccaggctgttcttgaactcctgacctcgtgatccacccacctcggcctcccaaagtgctgggattacaggc---------------------------------------------atgagTAGCTGGCCTTAGGCTTTTCT s panTro5.chr4 192844201 112 + 194502333 gtttcaccctcttagccaggctgttcttgaactcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaggt---------------------------------------------gtgagcAGCTGGCCTTAGGCTTTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728456 112 + 195804263 gtttcaccctcttagccaggctgttcttgaactcctgacctcgtgatccacccacctcagcctcccaaagtgctgggattacaggt---------------------------------------------gtgagcAGCTGGCCTTAGGCTTTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764835 112 + 4876863 gtttcaccctcttagccaggctgttcttgaactcctgacctcgtgatccacccacctcggcctcccaaagtgctgggattacaggc---------------------------------------------gtgagcAGCTGGCCTTAGGCTTTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650358 157 + 115148730 gtttcaccctcttggccaggctggtcttgaactcctgacctcatgatccacccgctatggcctcccacagtgctgggattgcaggcgtaagccaccttgcccagccGGGCTGACGTTTTGATTGTAGCCTTGTGAGCAGCTGGCCTTAGGcttttct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933373 112 + 190429646 gtttcaccctcttggccaggctggtcttgaactcctgaccttgtgacctacctgtcttggcctcccaaagtgctgggattgcaggt---------------------------------------------gtgagcAGCAGGCCTCAGACTTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880830 112 + 189454096 gtttcaccctcttggccaggctggtcttgaactcctgaccttgtgacctacctgtcttggcctcccaaagtgctgggattgcaggt---------------------------------------------gtgagcAGCAGGCCTCAGACTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258660 112 - 25927173 gtttcaccctcttggccaggctggtcttgaactcctgaccttgtgacccacctgtcttggcctcccaaagtgctgagattgcaggt---------------------------------------------gtgagcAGCAGGCCTCAGACTTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298203 112 + 4669795 gtttcaccctcttggccaggctggtcttgaactcctgaccttgtgacctacctgtcttggcctcccaaagtgctgggattgcaggt---------------------------------------------gtgagcAGCAggcctcagactttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134256961 112 + 135778131 gttccaccctcttggccaggctggtcttgaactcctgaccttgtgacccacccgtcttggcctcccaaagtgctgggattgcaggt---------------------------------------------gtgagcAGCAGGCCTCAGACTTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690710 112 - 2847728 gtttcaccctcttggccaggctggtcttgaactcctgaccttgtgacccacctgtcttggcctcccaaagtgctgggattgcaggt---------------------------------------------gtgagcAGCAGGCCTCAGAATTTTTT i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189570590 1 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e canFam3.chr16 16882097 1 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=607195.000000 s hg38.chr4_KI270789v1_alt 51991 124 + 205944 GATTATACATTTA-----TTTAGTAAAACTTTCTCAAGCAGTCACCTCTAATATATCT----ATATGTATTTATAAATTTCTCTACACGTTGTATGGTCTCCccatatattaaatgttagtatt-ttattttat s panTro5.chr4 192844313 114 + 194502333 GATTATACATGTA-----TTTAGTAAAACTTTCTCAAGCAGTCACCTCTAATATATCT----ATATGTATTTATAAATTTCTCTACACGTTGTATGGTCTCCCCATATATTAAATGTTAG-----------TAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728568 114 + 195804263 GATTATACATGTA-----TTTAGTAAAACTTTCTCAAGCAGTCACCTCTAATATATCT----ATATGTATTTATAAATTTCTCTACACGTTGTATGGTCTCCCCATATATTAAATGTTAG-----------TAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3764947 124 + 4876863 GATTATACATTTA-----TTTAGTAAAACTTTCTCAAGCAGTCACCTCTAATATATCT----ATATGTATTTATAAATTTCTCTACATGTTGTATGGTCTCCccatatattaaatgttagtatt-ttactttat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650515 119 + 115148730 gattatacactta-----tttagtaaaactttctcaagcagtcacctctaatatatct----atatgtatttataaatttctctgcatgttgtatggtctctccatatattaaatgttagtatt-t-----tat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933485 124 + 190429646 GATTATACACTTA-----TTCAGTAAAACTTTCTCAAGCAGTCACCTCTAATGTATCT----GTATGTCTTTATAAATTTCTCTGCACATTGTGTGGTCTCTCCATGTATTACATGTAAGTATA-TTATTTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187880942 124 + 189454096 GATTATACACTTA-----TTCAGTAAAACTTTCTCAAGCAGTCACCTCTAATGTATCT----GTATGTCTTTATAAATTTCTCTGCACGTTGTGTGGTCTCTCCATGTATTACATGTAAGTATA-TTATTTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258772 124 - 25927173 GATTATACACTTA-----TTCAGTAAAACTTTCTCAAGCAGTCACCTCTAATGTATCT----GTATGTCTTTATAAATTTCTCTGCACGTTGTGTGGTCTCTCCATGTATTACATGTAAGTATA-TTATTTTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298315 125 + 4669795 gattatacactta-----ttcagtaaaactttctcaagcagtcacctctaatgtatct----gtatgtctttataaattTCTCTGAACGTTGTGTGGTCTCTCCATGTATTACATGTAAGTATATTTATTTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257073 121 + 135778131 GATTATACACTTA-----TTTAGTAAAAGTGTCTCCAACAGTCACCTCTAATGTATCT----ATATGTCTTTCTAAATTTCTCTGCACGTTGTGTGGTCTCTCCATGTATTAAATGTAAGTA----TATTTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2690822 124 - 2847728 GATTATACACTTA-----TTCAGTAAAACTTTCTCAAGCAGTCACCTCTAATGTATCT----GTATGTCTTTATAAATTTCTCTGCACGTTGTGTGGTCTCTCCACGTATTACATGTAAGTATA-TTATTTTGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570591 106 - 190850796 GATTATATACTGA-----TTTAGTGAAACTTTCC----CAGTCACCTCTAATGTATCT----ATATGAGTTTAT-AATTTCTCTACACGTTGTGTGGTCTCTCCATGTATT--------------TTATTTTAT i calJac3.chr3 I 1 I 2 s canFam3.chr16 16882098 113 - 59632846 GATTATACATGCAATCATTTTAGTAAAACTTTTTTGGACAGTCACTTCTAATAAATCTCTACATAGGTATTTATGAATTTC-ATACTTATTTTGT-------------------TATTAGTAAT-TTATTTTAT i canFam3.chr16 I 1 I 2 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=329309.000000 s hg38.chr4_KI270789v1_alt 52115 84 + 205944 tttataaaacgaaataaaaatagataaagttggccaggcgaggtggctcacgactgtaatcccagcacttctggaggccgaggc s panTro5.chr4 192844427 82 + 194502333 TTTATAAAACGAAATAAAAATAGATAAAGTTggccaggcgcggtggctcatgac--taatcccagcacttttggaggccgaggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728682 82 + 195804263 TTTATAAAACGAAATAAAAATAGATAAAGTTggccaggcgcggtggctcatgac--taatcccagcacttttggaggccgaggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765071 84 + 4876863 tttataaaacgaaataaaaatagataaagttggccaggtgcggtggctcacgactgtaatcccagcacttttggaagccgaggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650634 84 + 115148730 tttatagaacaaaataaaaatagataaagttggccgggcacaggggctcacgcctgtaatcccagcactttgggaggctgaggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933609 80 + 190429646 TTTATAGAATGAAATAAAA----ATAAAGTTggtcgggcgcagtggctcacgcctgtaatcctgacactttgggaggccaaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881066 80 + 189454096 TTTATAGAATGAAATAAAA----ATAAAGTTggtcgggcgcagtggctcacgcctgtaatcctgacactttgggaggccaaggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258896 80 - 25927173 TTTATAGAATGAAATAAAA----ATAAAGTTggtcgggcgcagtggctcacgcctgtaatcctgacactttgggaggccaaggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298440 80 + 4669795 TTTATAGAATGAAATAAAA----ATAAAGTTggtcgggcgcagtggctcacgcctgtaatcctgacactttgggaggccaaggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257194 80 + 135778131 TTTATAGAATGAAATAACA----ATAAAGTTggtcgggcacagtgcctcacgcctgtaatcctggcactttgggaggccaaggc i chlSab2.chr7 C 0 I 242 s manLeu1.NW_012102221v1 2690946 80 - 2847728 TTTATAGAATGAAATAAAA----ATGAAGTTggtcgggcgcagtggctcacgcctgtaatcctgacactttgggaggccaaggc i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189570697 2 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e canFam3.chr16 16882211 2 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=768905.000000 s hg38.chr4_KI270789v1_alt 52199 253 + 205944 gggtggatcacgaggtcaggagatggagaccatcctggcgaacacggtgaaaccccgtctccactgaaaatacaaaca-aaaaaaaagaaaaaaggaaaaaaaaattagccgggcgtggtggcgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcagagc-cgcagtgagccgagattgtgcccctgcactacagcttgggcgaaagagcaagactccgtctca s panTro5.chr4 192844509 254 + 194502333 gggtggatcatgaggtcaggagatcgagaccatcctggcgaacacggtgaaaccctgtctccactgaaaatacaaacataaaaaaaagaaaaaaagaaaaaaaaa-tagccaggcgtggtggcgggcacctgtggtcccagctactcgggaggatgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagatcgcgccactgcactacagcttgggcgacagagcaagactccatctca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192728764 254 + 195804263 gggtggatcatgaggtcaggagatcgagaccatcctggcgaacacggtgaaaccctgtctccactgaaaatacaaacataaaaaaaagaaaaaaagaaaaaaaat-aagccaggcgtggtggcgggcacctgtggtcccagctactcgggaggatgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagatcgcgccactgcactacagcttgggcgacagagcaagactccatctca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765155 247 + 4876863 gggtggatcacgaggtcaggagatcgagaccatcctggccaacacggtgaaaccctgtctccgctgaaaatacaaacaaaaaaaaaagaaaaaataaa--------tagctgggtgtggtggcgggcgcctgcggtcccagctactcgggaggatgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagcccagattgcaccattgcactacagcttgggcgaaagagcaagactccgtctca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650718 238 + 115148730 gggtggatcatgaggtcaggagattgagaccatcttggctatcacagtgaaaccccgtctccactgaaaatac------aaaaaaaaaaaaaaat-----------tagccgggcgtgttggcgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcagagcctgcagtgagccaagatcgcaccactacactccagcctgggcgacagagtgagactctgtatca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933689 228 + 190429646 cagcagatcacgagatcaggagattgagaccattctggctaacatggtgaaaccccgtctctactaaaaatac------aaaaaaat-------------------tagctgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgtggcaggacaatggcctgaacccgggaggcagagcttgcagtgagccgagatcacaccactggactgcagcctgagtgacagagc--aattcggtctca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881146 228 + 189454096 cagcagatcacgagatcaggagattgagaccattctggctaacatggtgaaaccccgtctctactaaaaatac------aaaaaaat-------------------tagctgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgtggcaggacaatggcctgaacccgggaggcagagcttgcagtgagccgagatcacaccactggactgcagcctgagtgacagagc--aattcggtctca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24258976 228 - 25927173 cagcagatcacaagatcaggagattgagaccattctggctaacatggtgaaaccccgtctctactaaaaatac------aaaaaaat-------------------tagctgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgtggcaggacaatggcctgaacccgggaggcagagcttgcagtgagccgagatcgcaccactggactgcagcctgagcgacagagc--gattcggtctca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298520 228 + 4669795 cagcagatcacgagatcaggagattgagaccattctggctaacatggtgaaaccccgtctctactaaaaatac------aaaaaaat-------------------tagctgggcatggtggtgggtgcctgtagtctcagctactcaggaggctgtggcgggacaatggcctgaacccgggaggcagagcttgcagtgagccgagatcacaccactggactgcagcctgagtgacagagc--gattcggtctca i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2691026 228 - 2847728 cagcagatcacgagatcaggagattgagaccattctggctaacatggtgaaaccccgtctctactaaaaatac------aaaaaaat-------------------tagctgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgtggcaggacaatggcctgaacccgggaggcagagcttgcagtgagccgagattgcaccactggactgcagcctgagtgacagaac--gattccgtctca i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189570697 2 - 190850796 I e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e canFam3.chr16 16882211 2 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e saiBol1.JH378165 13055574 108 - 14256875 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e chlSab2.chr7 134257274 242 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=16991.000000 s hg38.chr4_KI270789v1_alt 52452 4 + 205944 aaaa s panTro5.chr4 192844763 4 + 194502333 aaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729018 4 + 195804263 aaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765402 4 + 4876863 aaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650956 4 + 115148730 aaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933917 4 + 190429646 aaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881374 4 + 189454096 aaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259204 4 - 25927173 aaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298748 4 + 4669795 aaaa i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2691254 4 - 2847728 aaat i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570699 4 - 190850796 AATG i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13055682 4 - 14256875 aatg i saiBol1.JH378165 I 108 C 0 s canFam3.chr16 16882213 4 - 59632846 AATA i canFam3.chr16 I 2 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389223 8 - 2520184 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e chlSab2.chr7 134257274 242 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3357.000000 s hg38.chr4_KI270789v1_alt 52456 4 + 205944 aaa--a s panTro5.chr4 192844767 4 + 194502333 aag--a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729022 3 + 195804263 aag--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765406 6 + 4876863 aaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650960 3 + 115148730 aaa--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933921 4 + 190429646 aaa--c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881378 4 + 189454096 aaa--c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259208 4 - 25927173 aaa--c i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298752 4 + 4669795 aaa--c i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2691258 4 - 2847728 aaa--c i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189570703 4 - 190850796 AAA--T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055686 4 - 14256875 aaa--t i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16882217 4 - 59632846 AAG--T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389231 4 - 2520184 AAA--T i dasNov3.JH570353 I 8 C 0 e cebCap1.NW_016107886v1 943946 742 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3335487 4967 - 5030052 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e chlSab2.chr7 134257274 242 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=36371.000000 s hg38.chr4_KI270789v1_alt 52460 8 + 205944 aaaaatag s panTro5.chr4 192844771 8 + 194502333 aaaaaTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729025 8 + 195804263 aaaaaTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765412 8 + 4876863 aaaaatag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650963 8 + 115148730 aaaaaaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933925 8 + 190429646 aacaaaaa i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187881382 8 + 189454096 aacaaaaa i macFas5.chr5 C 0 I 3 s macNem1.NW_012013133v1 24259212 8 - 25927173 aacaaaaa i macNem1.NW_012013133v1 C 0 I 3 s cerAty1.NW_012001672v1 3298756 8 + 4669795 aacaaaaa i cerAty1.NW_012001672v1 C 0 I 3 s manLeu1.NW_012102221v1 2691262 8 - 2847728 aaacaaaa i manLeu1.NW_012102221v1 C 0 I 2 s calJac3.chr3 189570707 8 - 190850796 GAAAATCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055690 8 - 14256875 aaacatat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 944688 8 - 2196201 aaaaatat i cebCap1.NW_016107886v1 I 742 C 0 s aotNan1.NW_018492112v1 3340454 8 - 5030052 aaaaatat i aotNan1.NW_018492112v1 I 4967 C 0 s canFam3.chr16 16882221 8 - 59632846 GAAAATAC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389235 8 - 2520184 AAAAATAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e chlSab2.chr7 134257274 242 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1073262.000000 s hg38.chr4_KI270789v1_alt 52468 129 + 205944 ataaagtttctcatattttcttctacacctcaactgattgtctttctcactctcCTTGAGGGCCA-CATTTAGTCTGCTTGCAGGTGCTAACACGGGGAATGATGATTTGGTCAGATTCATGTTTTCAAT s panTro5.chr4 192844779 128 + 194502333 ATAAAGTTTCTCATATTTTCTTCTACACCTCAACTGATTGT-TTTCTCACTCTCCTTGAGGGCCA-CATTTAGTCTGCTTGCAGGTGCTAACACAGGGAATGATGATTTGGTCAGATTTATGTTTTCAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729033 128 + 195804263 ATAAAGTTTCTCATATTTTCTTCTACACCTCAACTGATTGT-TTTCTCACTCTCCTTGAGGGCCA-CATTTAGTCTGCTTGCAGGTGCTAACACAGGGAATGATGATTTGGTCAGATTTATGTTTTCAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765420 129 + 4876863 gtaaagtttctcatattttcttctacacctcaactgattgtctttctcactctcCTTGAGGGCCA-CATTTAGTCTGCTTGCAGGTGCTAACACGGGGAATGATGATTTGGTCAGATTTATGTTTTCAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112650971 129 + 115148730 ataaagtttctcatattttcttctacacctcaactgattgtctttctcaccctccttgagggccg-cattcAGTCTGCTTGCAGGTGCTAACACGTGGAATGATGATTTGGTCAGCTTTATGTTTTCAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188933936 127 + 190429646 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAGGACCGTCATTTAGGCTGCTTCCAGGTGCTAACACGGGGA---ATGATTTGGTCAGATTTATGTTTTCAGT i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187881393 127 + 189454096 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAGGACCGTCATTTAGGCTGCTTCCAGGTGCTAACACGGGGA---ATGATTTGGTCAGATTTATGTTTTCAGT i macFas5.chr5 I 3 C 0 s macNem1.NW_012013133v1 24259223 127 - 25927173 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAGGACCGTCATTTAGGCTGCTTCCAGGTGCTAACACGGGGA---ATGATTTGGTCAGATTTATGTTTTCAGT i macNem1.NW_012013133v1 I 3 C 0 s cerAty1.NW_012001672v1 3298767 127 + 4669795 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAGGACCATCATTTAGGCTGCTTCCAGGTGCTAACATGGGGA---ATGATTTGGTCAGATTTATGTTTTCAGT i cerAty1.NW_012001672v1 I 3 C 0 s chlSab2.chr7 134257516 127 + 135778131 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAAGGCCATCATTTAGGCTGCTTCCAGGTGCTAACACGGGGA---ATGATTTGGTCAGATTGATGTTTTCAGT i chlSab2.chr7 I 242 C 0 s manLeu1.NW_012102221v1 2691272 127 - 2847728 ataaaGTTGCTAATATTTTCTGCTACATCTCAACTGATTGTCTTTCTCACTCTCCTTGAGGACCGTCATTTAGACTGCTTCCAGGTGCTAACGCGGGGA---ATGATTTGGTCAGATGTATGTTTTCAGT i manLeu1.NW_012102221v1 I 2 C 0 s calJac3.chr3 189570715 120 - 190850796 AGAAAGTTTCTAGTATTTTCTTCTGCAGCT----CAACTGTGTATCTCGCTCTCCTTGAGGGCCATCATTTGGGCTGTGCACAGGTGCTAACAT-GGGA---GTGATTTGGTCAGATT--TGTTTTCAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055698 125 - 14256875 agaaagtttctaatattttcttctacatctccaccgactgtctctgtcactctccttgaggGCCACCGTTTAGGCTGGGCACGGGTGCTAACATGGGGA---GTGATGTGGTCAGATG--TGTTTCCAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 944696 125 - 2196201 agaaagtttctaatattttcttctacatctcaactgattgtctttctcactctcCTTGAGGGCCATCATTTAGGCTGTGCACAGGTGCTAACATGGAGA---ATGATTTGGTCAGATT--TGTTTTCAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340462 124 - 5030052 agaaagtttctagtattttcttctacatctcaacagattgtctttctcactctccttg-gggCCATCATTTAGGCTGTGCACAGGTGCTAACATGGGGA---GTGATTTGGTCAGATT--TGTTTTCAAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16882229 122 - 59632846 GTGAAGTTTCTACTATTTTTTTCTACATCCCAATTGATTGTCTTTTTCACTTCCCTTGTGG----TCATGTAGATTGTTGATAGATTGTAAAA-GGGGA---GTGAGGTGATCAGATTTACCTTTTCCAT i canFam3.chr16 C 0 I 4 s dasNov3.JH570353 1389243 126 - 2520184 ACAAAGTTTCTAAGACTTTCTTTTACATTTCATTTAATTGTCTTTTTGCTCTCTCTCAAGGACAGTCCTTTAGGGTGTTTACAGGTTCTAGAGAGGAGG---GTGAGGAAGCCAGATT-GCCCTTTCAAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 815983 1548 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=1346974.000000 s hg38.chr4_KI270789v1_alt 52597 135 + 205944 --CACTC--CTCACA----GTGGAAGATAAGAGTTGAGGGATGCAGG---ATTCAAGGAGGGAAGTGTAGGAACCAAGATATTATGATGGATCAAGCAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAAGGA s panTro5.chr4 192844907 134 + 194502333 --CACTT--CTCACA----GTGGAAGAT-AGAGTTAAGGGACGCAGG---ATTCAAGGAGGGAAGTGTAGGAACCAAGATATTATGATGGATCAAGCAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729161 134 + 195804263 --CACTT--CTCACA----GTGGAAGAT-AGAGTTAAGGGACGCAGG---ATTCAAGGAGGGAAGTGTAGGAACCAAGATATTATGATGGATCAAGCAAGAGAAAGTCAGGAT-ATGACTGAGAGAGCAGG---CATGG-AG-TGAAAAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765549 135 + 4876863 --CACTC--CTCAAA----GTGGAAGATAAGAGTTGAGGGATGCAGG---ATTCAAGGAGGGAAGTGTGGGAACCAAGATATTATAATGGATCAAGCAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651100 134 + 115148730 --CACTC--CTCACA----GTGGAAGAT-AGAGTTGAGGCACGCAGG---ATTCAAGGAGGGAAGAGTAGGAACCAAGATATTAAAATGCATCAAGCAAGAGAAAGTCAGGAT-CTGACTGAAAGAGCAGG---CATGG-AG-TGAAAAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934063 134 + 190429646 --CACTC--CTCACA----GTGGAACAT-AGAGTTGATGTACACAGG---ATTCAAGGAGAAAAGAGTAGGAACCAAGATATTATAACGGATCAAACAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881520 134 + 189454096 --CACTC--CTCACA----GTGGAACAT-AGAGTTGATGTACACAGG---ATTCAAGGAGAAAAGAGTAGGAACCAAGATATTATAACGGATCAAACAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259350 134 - 25927173 --CACTC--CTCACA----GTGGAACAT-AGAGTTGATGTACACAGG---ATTCAAGGAGAAAAGAGTAGGAACCAAGATATTATAATGGATCAAACAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAGAGGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3298894 134 + 4669795 --CACTC--CTCACA----GTGGAACAT-AGAGTTGATGTACATAGG---ATTCAAGGAGAAAAGAGCAGGAACCAAGATATTATAACGGATCAAACAAGAGAAAGTCAGGAT-CTGACCGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257643 134 + 135778131 --CACTC--CTCACA----GTGGAAGAT-AGAGTTGATGTACACAAG---ATTCAAAGAGAAAAGAGTACGAACCAAGATACTATAACGGATCAAACAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691399 134 - 2847728 --CACTT--CTCACA----GTGGAAGAT-AGAGTTGATGTACACAGG---ATTCAAGGAGAAAAGTGTAGGAACCAAGATATTATAACGGATCAAACAAGAGAAAGTCAGGAT-CTGACTGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817535 134 + 2368649 --CACTC--CTCACA----GTGGAAGAT-AGAGTTGATGTGCACAGG---ATTCAAGGAGAAAAGAGTAGGAACCAAGATATTATAACGGATCAAACAAGAGAAAGTCAGGAT-GTGACTGAGAGAGCAGG---CATGG-AG-TGAAAGGGA i colAng1.NW_012116221v1 M 1548 C 0 s calJac3.chr3 189570835 134 - 190850796 --CCCTC--CTCACA----GTGGAAGAT-AAAGTTGAGGCACCCAGG---ATTCATGGAGGGAAGAGGAGGAACTGAGGTATTATAGTGGATTGAGCAAGAGAAAGCCAGGAT-CTGACTCCGAGGGCAGC---CATGG-AG-TGAAAAGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055823 134 - 14256875 --CACCC--CTCACA----GTGGAGGAT-AAGGTTGAGGTACCCAGG---ATTCAAGGAGGGAAGAGTAGGAACCACAGTATTATAACGGATCAAGCAAGAGAAAGTCAGGAT-CCGACTCTGAGAGCAGC---CGTGT-AG-TGAAAAGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 944821 134 - 2196201 --CACTC--CTCACA----GTGGAAGAT-AAAGTTGAGGTACACAGG---ATTCAAGGAGGGAAAAGTAGGAACCAAGGTGTTATAATGGATCAAGCAAGAGAAAGTCAGGAT-CCGACTCAGAGAGCAGC---CGTGG-AG-TGAAAAGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340586 132 - 5030052 --CACTC--CTCACA----GTGGAAGAT-GAAGTTGAGGTACACAGG---ATTCAAGGAGGGAAGAGAAGGAACAAAGATATTATAATGGATCAAGCA--AGAAAGTCAGGAT-CCGACTCAGAGAGCAGT---CGTGG-AG-TGAAAAGGA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16882355 143 - 59632846 --CATTC--TGTCCAGAGTGTGGAGGCTGGAAGTTGAGGTAAACAGG---ACT-GAGGAAGAGAGAATGATTACCAGTGTGCTGCATTGCACCAAACAAGAGAAGATGAGATTCCCGACTCCAAGAGCAGAAGTCATGA-GGATGAAAAGAA i canFam3.chr16 I 4 C 0 s dasNov3.JH570353 1389369 145 - 2520184 CCCATTTTGCTAGCA--GCGTGGGGGAT-GGAATTGAGGCACAGAGGTGAAGACAGGAAGACTAGTCCAGTGACCAAGATACTGCAATGGGTCAAGCAAGAGAAACGGAGCAT-CTGACTCAGAAAGTAGG--TTGTGGCCA-CGCAAAGGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=527131.000000 s hg38.chr4_KI270789v1_alt 52732 60 + 205944 GGGCTAAATTTGAGAAATACCTAGGTAGTAGAATTGGTACGATCC-GCCCATTGAGTAGGG s panTro5.chr4 192845041 60 + 194502333 GGGCTAAATTTGAGAAATACCTAGGTAGTAGAATTGGTACGATCC-GCCCATTGAGTAGGG i panTro5.chr4 C 0 I 1 s panPan2.chr4 192729295 60 + 195804263 GGGCTAAATTTGAGAAATACCTAGGTAGTAGAATTGGTACGATCC-GCCCATTGAGTAGGG i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3765684 60 + 4876863 GGACTAAATTTGAGAAATACCTAGGTAGTAGAACTGGTACGATCT-GCCCATTGAGTAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651234 60 + 115148730 GGGCTAGATTTGAGAAATACCTAGGTAGTAGGATTGGTACGATCT-GCCCATTGAGGAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934197 60 + 190429646 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881654 60 + 189454096 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259484 60 - 25927173 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299028 60 + 4669795 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257777 60 + 135778131 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691533 60 - 2847728 GGGCTAGATTTGAGAAATACCGAGGTAGTGGAATTGGTAAGATCT-GCTCATTGAGTAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817669 61 + 2368649 GGGCTCGATTTGAGAAATACCGAGGCAGTGGAATTGGTAAGATCTAGCTCATTGAGTACAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189570969 59 - 190850796 GGGACAGATTTGAG-AATATTTAGGCAGGTGAATCGGTAAGATCT-GCCCACTGACTAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13055957 58 - 14256875 GGGACAGA-CTAAG-AATATCTAGGTAGTTGAATTGGTAAGATCC-GCCCATTGATTAGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 944955 58 - 2196201 GGGACAGA-TTGAG-AATATCTAGGTCGGCGAATCGGTAAGATCC-GCCCATGGATTAGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340718 59 - 5030052 GGGACAGATTTGAG-AAGATTTAGGTAGGTGAATCAGTAAGATCT-GCCCGTTGAATAGGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16882498 55 - 59632846 -----AGATTTAAGAAATATTTAGGAGGTAGAATTGGCAAGACTT-GCCCACTGCATGGGT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=159875.000000 s hg38.chr4_KI270789v1_alt 52792 21 + 205944 GTGGGGAGTGGCTCTGAGAGG s gorGor5.CYUI01015356v1 3765744 21 + 4876863 GTGGGGAGTGGCTCTGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651294 21 + 115148730 GTGGGGAGTGGCTCCGAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934257 21 + 190429646 GTAGGGAGTGGCTCTGAGAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881714 21 + 189454096 GTAGGGAGTGGCTCTGAGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259544 21 - 25927173 GTGGGGAGTGGCCCTGAGAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299088 21 + 4669795 GTGGGGAGTGGCTCTGAGAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257837 21 + 135778131 GTGGGGAGTGGCCCTGAGAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691593 21 - 2847728 GTGGGGAGTGGCCCTGAGAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817730 21 + 2368649 GTGGGGAGTGGCGCTGAGAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571028 21 - 190850796 GTGGGCAGCGGATCTGAGAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13056015 21 - 14256875 GTTGGCAGTGGACCTGAGAGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945013 21 - 2196201 GTGGGCTGTGGATCTGAGAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340777 21 - 5030052 GTGGGCAGTGGATCTGAGAGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16882553 21 - 59632846 TGAGGGAGTAGCCCTGAATGG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e mm10.chr8 86520084 664 - 129401213 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=6228.000000 s hg38.chr4_KI270789v1_alt 52813 1 + 205944 C s gorGor5.CYUI01015356v1 3765765 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651315 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934278 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881735 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259565 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299109 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257858 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691614 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817751 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13056036 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945034 1 - 2196201 C i cebCap1.NW_016107886v1 C 0 I 6 s aotNan1.NW_018492112v1 3340798 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 I 8 e calJac3.chr3 189571049 0 - 190850796 C e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=20024.000000 s hg38.chr4_KI270789v1_alt 52814 6 + 205944 CGGAGT s gorGor5.CYUI01015356v1 3765766 6 + 4876863 CGCAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651316 6 + 115148730 CGGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934279 6 + 190429646 TGGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881736 6 + 189454096 TGGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259566 6 - 25927173 CGGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299110 6 + 4669795 TGGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257859 6 + 135778131 CGTAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691615 6 - 2847728 CGGAGT i manLeu1.NW_012102221v1 C 0 I 2 s colAng1.NW_012116221v1 817752 6 + 2368649 TGGAGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13056037 6 - 14256875 AAGGGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189571049 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=7416.000000 s hg38.chr4_KI270789v1_alt 52820 2 + 205944 GA s gorGor5.CYUI01015356v1 3765772 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651322 2 + 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934285 2 + 190429646 GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881742 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259572 2 - 25927173 GA i macNem1.NW_012013133v1 C 0 I 10 s cerAty1.NW_012001672v1 3299116 2 + 4669795 GA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257865 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 817758 2 + 2368649 GA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13056043 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189571049 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3207.000000 s hg38.chr4_KI270789v1_alt 52822 2 + 205944 GG s gorGor5.CYUI01015356v1 3765774 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651324 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934287 1 + 190429646 -G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 1 + 189454096 -G i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 1 + 4669795 -G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257867 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 817760 1 + 2368649 -G i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13056045 2 - 14256875 AG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189571049 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=16605.000000 s hg38.chr4_KI270789v1_alt 52824 8 + 205944 CCTGAGTG s gorGor5.CYUI01015356v1 3765776 8 + 4876863 CCTGAGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651325 8 + 115148730 CTGGAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934288 8 + 190429646 CCGGAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881745 8 + 189454096 CCGGAGTA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299119 8 + 4669795 CCGGAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257869 8 + 135778131 CTGGAGTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 817761 8 + 2368649 CCGGAGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571049 8 - 190850796 CACGAGCA i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1694.000000 s hg38.chr4_KI270789v1_alt 52832 1 + 205944 A s gorGor5.CYUI01015356v1 3765784 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651333 1 + 115148730 A i nomLeu3.chr7b C 0 T 53 s rheMac8.chr5 188934296 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881753 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299127 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257877 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189571057 1 - 190850796 G i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=26540.000000 s hg38.chr4_KI270789v1_alt 52833 19 + 205944 AGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765785 19 + 4876863 AGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934297 19 + 190429646 AGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881754 19 + 189454096 AGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299128 19 + 4669795 AGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257878 19 + 135778131 GGGGATGGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651334 53 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=81741.000000 s hg38.chr4_KI270789v1_alt 52852 43 + 205944 CCATTGAGTAGGGATGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765804 43 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651281 43 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b T 53 T 43 s rheMac8.chr5 188934316 43 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881773 43 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299147 43 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257897 43 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=100.000000 s hg38.chr4_KI270789v1_alt 52895 1 + 205944 G s gorGor5.CYUI01015356v1 3765847 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134257940 0 + 135778131 C e cerAty1.NW_012001672v1 3299190 0 + 4669795 C e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881816 0 + 189454096 C e rheMac8.chr5 188934359 0 + 190429646 C e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=9354.000000 s hg38.chr4_KI270789v1_alt 52896 8 + 205944 GCCTGAGT s gorGor5.CYUI01015356v1 3765848 8 + 4876863 GCCTGAGT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934359 8 + 190429646 GCCGGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881816 8 + 189454096 GCCGGAGT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299190 8 + 4669795 GCCGGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257940 8 + 135778131 GCTGGAGT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1763.000000 s hg38.chr4_KI270789v1_alt 52904 2 + 205944 GA s gorGor5.CYUI01015356v1 3765783 2 + 4876863 GA i gorGor5.CYUI01015356v1 T 73 C 0 s rheMac8.chr5 188934367 2 + 190429646 AA i rheMac8.chr5 C 0 T 124 s macFas5.chr5 187881824 2 + 189454096 AA i macFas5.chr5 C 0 T 124 s cerAty1.NW_012001672v1 3299198 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 T 124 s chlSab2.chr7 134257948 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=5168.000000 s hg38.chr4_KI270789v1_alt 52906 19 + 205944 AGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765785 19 + 4876863 AGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s chlSab2.chr7 134257950 19 + 135778131 AGGGATAGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e cerAty1.NW_012001672v1 3299200 124 + 4669795 T e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881826 124 + 189454096 T e rheMac8.chr5 188934369 124 + 190429646 T e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=600.000000 s hg38.chr4_KI270789v1_alt 52925 1 + 205944 C s gorGor5.CYUI01015356v1 3765804 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s chlSab2.chr7 134257969 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e cerAty1.NW_012001672v1 3299200 124 + 4669795 T e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881826 124 + 189454096 T e rheMac8.chr5 188934369 124 + 190429646 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=76285.000000 s hg38.chr4_KI270789v1_alt 52926 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765805 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934245 42 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i rheMac8.chr5 T 124 C 0 s macFas5.chr5 187881702 42 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i macFas5.chr5 T 124 C 0 s cerAty1.NW_012001672v1 3299076 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTGA i cerAty1.NW_012001672v1 T 124 C 0 s chlSab2.chr7 134257970 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=38127.000000 s hg38.chr4_KI270789v1_alt 52968 30 + 205944 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765847 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258012 29 + 135778131 -GCCGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=79107.000000 s hg38.chr4_KI270789v1_alt 52998 43 + 205944 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765804 43 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 43 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b T 43 T 43 s rheMac8.chr5 188934316 43 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 43 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 43 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258041 43 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37698.000000 s hg38.chr4_KI270789v1_alt 53041 30 + 205944 GGCCGGACTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765847 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 146 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258084 29 + 135778131 -GCCGGAGTAAAGGGATGGGAGAAGCAAGT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53071 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 146 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258113 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=73885.000000 s hg38.chr4_KI270789v1_alt 53072 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCAGAGTGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934317 42 + 190429646 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881702 42 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299148 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258114 41 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCCGGAGTG- i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=-820.000000 s hg38.chr4_KI270789v1_alt 53114 1 + 205944 -G s gorGor5.CYUI01015356v1 3765774 1 + 4876863 -G i gorGor5.CYUI01015356v1 C 0 C 0 s chlSab2.chr7 134258155 1 + 135778131 T- i chlSab2.chr7 C 0 T 216 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e cerAty1.NW_012001672v1 3299190 72 + 4669795 T e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881744 0 + 189454096 C e rheMac8.chr5 188934359 72 + 190429646 T e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37612.000000 s hg38.chr4_KI270789v1_alt 53115 29 + 205944 GCCTGAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765775 29 + 4876863 GCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 29 + 189454096 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134257940 29 + 135778131 GCTGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 T 216 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53144 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134257969 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=76285.000000 s hg38.chr4_KI270789v1_alt 53145 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934245 42 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881702 42 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299076 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTGA i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134257970 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37653.000000 s hg38.chr4_KI270789v1_alt 53187 30 + 205944 GGCCGGACTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765774 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258012 29 + 135778131 -GCCGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=79107.000000 s hg38.chr4_KI270789v1_alt 53217 43 + 205944 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765804 43 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651281 43 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b T 43 T 45 s rheMac8.chr5 188934316 43 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 43 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 43 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258041 43 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=36052.000000 s hg38.chr4_KI270789v1_alt 53260 28 + 205944 GGCCTGAGTGAAGGGATGGGAGAAGCAA s gorGor5.CYUI01015356v1 3765847 28 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAA i gorGor5.CYUI01015356v1 C 0 T 144 s rheMac8.chr5 188934287 27 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAA i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 27 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAA i macFas5.chr5 T 72 T 72 s cerAty1.NW_012001672v1 3299118 27 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAA i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258084 27 + 135778131 -GCCGGAGTAAAGGGATGGGAGAAGCAA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 45 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=-104.000000 s hg38.chr4_KI270789v1_alt 53288 2 + 205944 GT s nomLeu3.chr7b 112651279 2 + 115148730 GC i nomLeu3.chr7b T 45 C 0 s rheMac8.chr5 188934314 2 + 190429646 AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881699 1 + 189454096 -G i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299145 2 + 4669795 AT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258111 2 + 135778131 GT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e gorGor5.CYUI01015356v1 3765875 144 + 4876863 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53290 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 144 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881700 1 + 189454096 C i macFas5.chr5 C 0 I 1 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258113 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=75751.000000 s hg38.chr4_KI270789v1_alt 53291 41 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTG s gorGor5.CYUI01015356v1 3765732 41 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 41 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934245 41 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTG i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881702 41 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTG i macFas5.chr5 I 1 C 0 s cerAty1.NW_012001672v1 3299076 41 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTG i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258114 41 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCCGGAGTG i chlSab2.chr7 C 0 T 143 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 53332 1 + 205944 A s gorGor5.CYUI01015356v1 3765773 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651323 1 + 115148730 A i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934286 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881743 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299117 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258155 143 + 135778131 T e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=100.000000 s hg38.chr4_KI270789v1_alt 53333 1 + 205944 G s gorGor5.CYUI01015356v1 3765774 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258155 143 + 135778131 T e cerAty1.NW_012001672v1 3299118 0 + 4669795 C e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881744 0 + 189454096 C e rheMac8.chr5 188934287 0 + 190429646 C e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37793.000000 s hg38.chr4_KI270789v1_alt 53334 29 + 205944 GCCGGACTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765775 29 + 4876863 GCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934287 29 + 190429646 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258012 29 + 135778131 GCCGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 T 143 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=79107.000000 s hg38.chr4_KI270789v1_alt 53363 43 + 205944 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765804 43 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651281 43 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b T 43 T 43 s rheMac8.chr5 188934316 43 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 43 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 43 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258041 43 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=38172.000000 s hg38.chr4_KI270789v1_alt 53406 30 + 205944 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765847 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258084 29 + 135778131 -GCCGGAGTAAAGGGATGGGAGAAGCAAGT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53436 1 + 205944 C s gorGor5.CYUI01015356v1 3765804 1 + 4876863 C i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258113 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=75046.000000 s hg38.chr4_KI270789v1_alt 53437 41 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCAGAGTG s gorGor5.CYUI01015356v1 3765805 41 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 41 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934245 41 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTG i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881774 41 + 189454096 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299076 41 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTG i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258114 41 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCCGGAGTG i chlSab2.chr7 C 0 T 143 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 53478 1 + 205944 A s gorGor5.CYUI01015356v1 3765846 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651323 1 + 115148730 A i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934286 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881815 1 + 189454096 A i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299117 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258155 143 + 135778131 T e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=100.000000 s hg38.chr4_KI270789v1_alt 53479 1 + 205944 G s gorGor5.CYUI01015356v1 3765847 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258155 143 + 135778131 T e cerAty1.NW_012001672v1 3299118 0 + 4669795 C e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881816 72 + 189454096 T e rheMac8.chr5 188934287 0 + 190429646 C e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37793.000000 s hg38.chr4_KI270789v1_alt 53480 29 + 205944 GCCGGACTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765848 29 + 4876863 GCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 146 s rheMac8.chr5 188934287 29 + 190429646 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258012 29 + 135778131 GCCGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 T 143 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53509 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 146 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258041 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=76113.000000 s hg38.chr4_KI270789v1_alt 53510 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934245 42 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881774 42 + 189454096 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299076 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTGA i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258042 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37698.000000 s hg38.chr4_KI270789v1_alt 53552 30 + 205944 GGCCGGACTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765774 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258084 29 + 135778131 -GCCGGAGTAAAGGGATGGGAGAAGCAAGT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53582 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258113 1 + 135778131 C i chlSab2.chr7 C 0 T 289 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=78746.000000 s hg38.chr4_KI270789v1_alt 53583 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGCGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934317 42 + 190429646 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881774 42 + 189454096 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299148 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134257825 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGTAGTGA i chlSab2.chr7 T 289 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37687.000000 s hg38.chr4_KI270789v1_alt 53625 30 + 205944 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765774 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134257867 30 + 135778131 GGCTGGAGTAAGGGGATGGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53655 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134257897 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=78214.000000 s hg38.chr4_KI270789v1_alt 53656 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGCGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934245 42 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881702 42 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299076 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTGA i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134257898 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=37472.000000 s hg38.chr4_KI270789v1_alt 53698 30 + 205944 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765774 30 + 4876863 GGCCTGAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934287 29 + 190429646 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 29 + 189454096 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 29 + 4669795 -GCCGGAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134257940 29 + 135778131 -GCTGGAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 53728 1 + 205944 C s gorGor5.CYUI01015356v1 3765731 1 + 4876863 C i gorGor5.CYUI01015356v1 T 73 C 0 s nomLeu3.chr7b 112651281 1 + 115148730 C i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 1 + 190429646 C i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 1 + 189454096 C i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134257969 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=76285.000000 s hg38.chr4_KI270789v1_alt 53729 42 + 205944 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765732 42 + 4876863 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651282 42 + 115148730 CATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b C 0 T 43 s rheMac8.chr5 188934245 42 + 190429646 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881702 42 + 189454096 CATTGAGTAGGGGTAGGGAGTGGCTCTGAGAGGCTGGAGTGA i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299076 42 + 4669795 CATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCTGGAGTGA i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134257970 42 + 135778131 CATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 I 4 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=100.000000 s hg38.chr4_KI270789v1_alt 53771 1 + 205944 G s gorGor5.CYUI01015356v1 3765774 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258012 4 + 135778131 I e cerAty1.NW_012001672v1 3299118 0 + 4669795 C e macNem1.NW_012013133v1 24259574 10 - 25927173 I e macFas5.chr5 187881744 0 + 189454096 C e rheMac8.chr5 188934287 0 + 190429646 C e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2707.000000 s hg38.chr4_KI270789v1_alt 53772 4 + 205944 GCCT s gorGor5.CYUI01015356v1 3765775 4 + 4876863 GCCT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934287 4 + 190429646 GCCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881744 4 + 189454096 GCCG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299118 4 + 4669795 GCCG i cerAty1.NW_012001672v1 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e chlSab2.chr7 134258012 4 + 135778131 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=33988.000000 s hg38.chr4_KI270789v1_alt 53776 25 + 205944 GAGTGAAGGGATGGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765779 25 + 4876863 GAGTGAAGGGATGGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934291 25 + 190429646 GAGTAAAGGGATGGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881748 25 + 189454096 GAGTAAAGGGATGGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299122 25 + 4669795 GAGTAAAGGGATGGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258016 25 + 135778131 GAGTAAAGGGATAGGAGAAGCAAAT i chlSab2.chr7 I 4 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=79107.000000 s hg38.chr4_KI270789v1_alt 53801 43 + 205944 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGGAGTGA s gorGor5.CYUI01015356v1 3765804 43 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCGCAGTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651281 43 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCGGAGTGA i nomLeu3.chr7b T 43 T 43 s rheMac8.chr5 188934316 43 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i rheMac8.chr5 C 0 T 72 s macFas5.chr5 187881773 43 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i macFas5.chr5 C 0 T 72 s cerAty1.NW_012001672v1 3299147 43 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCGGAGTGA i cerAty1.NW_012001672v1 C 0 T 72 s chlSab2.chr7 134258041 43 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCTGGACTGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=20227.000000 s hg38.chr4_KI270789v1_alt 53844 17 + 205944 GGCCTGAGTGAAGGGAT s gorGor5.CYUI01015356v1 3765847 17 + 4876863 GGCCTGAGTGAAGGGAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188934287 16 + 190429646 -GCCGGAGTAAAGGGAT i rheMac8.chr5 T 72 C 0 s macFas5.chr5 187881744 16 + 189454096 -GCCGGAGTAAAGGGAT i macFas5.chr5 T 72 C 0 s cerAty1.NW_012001672v1 3299118 16 + 4669795 -GCCGGAGTAAAGGGAT i cerAty1.NW_012001672v1 T 72 C 0 s chlSab2.chr7 134258084 16 + 135778131 -GCCGGAGTAAAGGGAT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e dasNov3.JH570353 1389514 0 - 2520184 C e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=20002.000000 s hg38.chr4_KI270789v1_alt 53861 13 + 205944 GGGAGAAGCAAAT s gorGor5.CYUI01015356v1 3765864 13 + 4876863 GGGAGAAGCAAAT i gorGor5.CYUI01015356v1 C 0 T 73 s rheMac8.chr5 188934303 13 + 190429646 GGGAGAAGCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881760 13 + 189454096 GGGAGAAGCAAAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299134 13 + 4669795 GGGAGAAGCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258100 13 + 135778131 GGGAGAAGCAAGT i chlSab2.chr7 C 0 C 0 s dasNov3.JH570353 1389514 13 - 2520184 GGGAAAAACGCGG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e nomLeu3.chr7b 112651324 43 + 115148730 T e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=77009.000000 s hg38.chr4_KI270789v1_alt 53874 37 + 205944 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCG s gorGor5.CYUI01015356v1 3765804 37 + 4876863 CCATTGAGTAGGGGTGGGGAGTGGCTCTGAGAGGCCG i gorGor5.CYUI01015356v1 T 73 I 15 s nomLeu3.chr7b 112651281 37 + 115148730 CCATTGAGGAGGGGTGGGGAGTGGCTCCGAGAGGCCG i nomLeu3.chr7b T 43 C 0 s rheMac8.chr5 188934316 37 + 190429646 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881773 37 + 189454096 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299147 37 + 4669795 CCATTGAGTAGGGGTGGGGAGTGGCCCTGAGAGGCCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258113 37 + 135778131 CCATTGAGTAGGGGTGGGGAGTGGCTCTTAGAGGCCG i chlSab2.chr7 C 0 C 0 s dasNov3.JH570353 1389527 33 - 2520184 CCATCGAAT--GGGTGGG--GTGGATTTTGGAGGTGG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e canFam3.chr16 16882574 0 - 59632846 C e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2552.000000 s hg38.chr4_KI270789v1_alt 53911 1 + 205944 G s gorGor5.CYUI01015356v1 3765856 1 + 4876863 G i gorGor5.CYUI01015356v1 I 15 C 0 s nomLeu3.chr7b 112651318 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934353 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881810 1 + 189454096 G i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3299184 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258150 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s canFam3.chr16 16882574 1 - 59632846 G i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389560 1 - 2520184 A i dasNov3.JH570353 C 0 I 4 e calJac3.chr3 189571058 0 - 190850796 C e cebCap1.NW_016107886v1 945035 6 - 2196201 I e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e colAng1.NW_012116221v1 817769 0 + 2368649 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3785.000000 s hg38.chr4_KI270789v1_alt 53912 1 + 205944 A s gorGor5.CYUI01015356v1 3765857 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651319 1 + 115148730 A i nomLeu3.chr7b C 0 I 14 s rheMac8.chr5 188934354 1 + 190429646 A i rheMac8.chr5 C 0 I 14 s macFas5.chr5 187881811 1 + 189454096 A i macFas5.chr5 C 0 I 14 s cerAty1.NW_012001672v1 3299185 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 I 14 s chlSab2.chr7 134258151 1 + 135778131 A i chlSab2.chr7 C 0 I 14 s colAng1.NW_012116221v1 817769 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 945041 1 - 2196201 A i cebCap1.NW_016107886v1 I 6 C 0 s canFam3.chr16 16882575 1 - 59632846 G i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389565 1 - 2520184 A i dasNov3.JH570353 I 4 C 0 e calJac3.chr3 189571058 0 - 190850796 C e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3340799 8 - 5030052 I e saiBol1.JH378165 13056047 0 - 14256875 C e manLeu1.NW_012102221v1 2691621 2 - 2847728 I e macNem1.NW_012013133v1 24259574 10 - 25927173 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=91296.000000 s hg38.chr4_KI270789v1_alt 53913 12 + 205944 AGGGATGGGAGA s gorGor5.CYUI01015356v1 3765858 12 + 4876863 AGGGATGGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651334 12 + 115148730 AGGGATGGGAGA i nomLeu3.chr7b I 14 C 0 s rheMac8.chr5 188934369 12 + 190429646 AGGGATGGGAGA i rheMac8.chr5 I 14 C 0 s macFas5.chr5 187881826 12 + 189454096 AGGGATGGGAGA i macFas5.chr5 I 14 C 0 s macNem1.NW_012013133v1 24259584 12 - 25927173 AGGGATGGGAGA i macNem1.NW_012013133v1 I 10 C 0 s cerAty1.NW_012001672v1 3299200 12 + 4669795 AGGGATGGGAGA i cerAty1.NW_012001672v1 I 14 C 0 s chlSab2.chr7 134258166 12 + 135778131 AGGGATGGGAGA i chlSab2.chr7 I 14 C 0 s manLeu1.NW_012102221v1 2691623 12 - 2847728 AGGGATGGGAGA i manLeu1.NW_012102221v1 I 2 C 0 s colAng1.NW_012116221v1 817770 12 + 2368649 AGGGAGGGGAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571058 12 - 190850796 AGGGATGGGAGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 945042 12 - 2196201 AGGGATGCGAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340807 11 - 5030052 AGGGATG-GAGA i aotNan1.NW_018492112v1 I 8 C 0 s canFam3.chr16 16882576 12 - 59632846 GAGGATGAAGGT i canFam3.chr16 C 0 I 5 s dasNov3.JH570353 1389566 12 - 2520184 AAGAGTGGGAGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e saiBol1.JH378165 13056047 0 - 14256875 C e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=99806.000000 s hg38.chr4_KI270789v1_alt 53925 18 + 205944 AGCAAATG-GCGCACATTG s gorGor5.CYUI01015356v1 3765870 18 + 4876863 AGCAAATG-GCGCACATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651346 18 + 115148730 AGCAAATG-GTGCACATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934381 17 + 190429646 AGCAAATG-GTGCA-ATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881838 17 + 189454096 AGCAAATG-GTGCA-ATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259596 17 - 25927173 AGCAAATG-GTGCA-ATTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299212 17 + 4669795 AGCAAATG-GTGCA-ATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258178 18 + 135778131 AGCAAATG-GTGCACATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691635 17 - 2847728 AGCAAATG-GTGCA-ATTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817782 18 + 2368649 AGCAAATG-GTGCACATTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571070 18 - 190850796 GGTCAATG-GTGCGCATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13056047 18 - 14256875 GGTCAAGG-GTGCACACTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945054 18 - 2196201 GGTCAATG-GTGCACATTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3340818 18 - 5030052 GGTAAACG-GCGCGCACTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16882593 19 - 59632846 ATTAAATGTATGCAAATTT i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1389578 16 - 2520184 AGTAAATG--TGTGAATT- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e panPan2.chr4 192729355 1 + 195804263 I e panTro5.chr4 192845101 1 + 194502333 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=769350.000000 s hg38.chr4_KI270789v1_alt 53943 85 + 205944 TGTTTC-GGTGACTGAGAGAATAGTGGTTATGTTTAATGAGACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AATT s panTro5.chr4 192845102 85 + 194502333 TGTTTC-GGTGACTGAGAGAATAGTGGTTATGTTTAATGAGACAGAAGATTCAGTGGAC-AAGCAGATTTTAGTGGTGGGTTC-AATT i panTro5.chr4 I 1 C 0 s panPan2.chr4 192729356 85 + 195804263 TGTTTC-GGTGACTGAGAGAATAGTGGTTATGTTTAATGAGACAGAAGATTCAGTGGAC-AAGCAGATTTTAGTGGTGGGTTC-AATT i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3765888 85 + 4876863 TGTTTC-GGTGACTGAGAGAATAGTGGTTATGTTTAATGAGACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651364 86 + 115148730 TGTTTT-GGTGACTGGGAGAATAGTGGTTATGCTTAATGAGGCAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTCAAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934398 83 + 190429646 TGCTTCGGGTGACTGGGAGAACAGTGGTTATGTT---TGACACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881855 83 + 189454096 TGCTTCGGGTGACTGGGAGAACAGTGGTTATGTT---TGACACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259613 83 - 25927173 TGCTTCGGGTGATTGGGAGAATAGTGGTTATGTT---AGACACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299229 83 + 4669795 TGCTTCGGGTGACTGGGAGAATAGTGGTTATGTT---TGACACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258196 86 + 135778131 TGCTTCGGGTGACTGGGAGAATAGTGGTTATGTTTAATGACACGGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691652 86 - 2847728 TGCTTCGGGTGACTGGGAGAATAGTGGTTATGTTTAATGACACAGAAGATTCAGTGGAT-AAGCAGGTTTTAGTGGTGGGTTC-AGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817800 86 + 2368649 TGCTTCGGGTGACTGGGAGAATAGTGGTTATGTTTAATGACACAGAAGATTCAGTGGAT-AAGCAGATTTTAGTGGTGGGTTC-AATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571088 85 - 190850796 TGTTTG-GGTGACTGGGAGGACAGTGGTTATGTTTAATGAGAAAAGAGACTCAGCTGAT-GAGCAGATTTTAGTGGCAGGTTC-TATT i calJac3.chr3 C 0 I 170 s saiBol1.JH378165 13056065 85 - 14256875 TGTCTG-GGTGACTGGGAGAACGGTGGTTATGTTTATTGAGACAGAAGCCTCAGCTGAT-GAGCAGATTTTAGTGGCAGGTTC-TATT i saiBol1.JH378165 C 0 I 170 s cebCap1.NW_016107886v1 945072 85 - 2196201 CGTTTG-GGTGACTGGGAGAACAGTGGTTATGTTTAATGAGACAAAAGACTGAGTTGAT-GAACAGATTTTAGTGGCGGGTTC-TATT i cebCap1.NW_016107886v1 C 0 I 170 s aotNan1.NW_018492112v1 3340836 85 - 5030052 TGTTTG-GGTGACTGGGAGAGCAGTGGTTATGTTTAATGACACAAAAGACTCAGCTGAT-GAGCAGATTTCAGTGGCGGGTTC-TATT i aotNan1.NW_018492112v1 C 0 I 172 s canFam3.chr16 16882612 76 - 59632846 TGTTTC-AGTTACAAAGAAAATAATGGCAATGTTTCATGAGACAGAGAATTTTTTGGATAAAGCAG-----AGTTGGGGGCT------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389594 52 - 2520184 TGTTGG-GGTGACT---AGAATATGGGTGATGTTTAATGAGACAG-------------T-AAGTAGAATT------------------ i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1964137.000000 s hg38.chr4_KI270789v1_alt 54028 192 + 205944 AAGAAATTGACCTCATCTTTATACAGATTCACTTCCTTTTAATTTTCTCTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTATTATTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTTGGCCCAACCCGTGTTCCATGGTGAATTCAGACAGT----------AAA-AGAAGCAACTGTTTTTC s panTro5.chr4 192845187 192 + 194502333 AAGAAATTGACCTCATCTTTATACAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATTCAAAATTTGGTTGTATTGTTTTTCTGCTGAACAACCTGTATTATTCTCCTTTCTTTT-------------------CCAAATTTCCACATTTTGGCCCAACCCGTGTTCCATGGTGAATTCAGACAGT----------AAA-AGAAGCAACTGTTTTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729441 192 + 195804263 AAGAAATTGACCTCATCTTTATACAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTATTGTTTTTCTGCTGAACAACCTGTATTATTCTCCTTTCTTTT-------------------CCAAATTTCCACATTTTGGCCCAACCCGTGTTCCATGGTGAATTCAGACAGT----------AAA-AGAAGCAACTGTTTTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3765973 192 + 4876863 AAGAAATTGACCTCATCTTTATACAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGTTATTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTTGGCCCAACCCGTGTTCCATGGTGAATTCAGACAGT----------AAA-AGAAGCAACTGTTTTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651450 193 + 115148730 AAGAAATTGACCTCATCTTTATACAGATTCACTTCCTTTTAATTTTCTTTCAACACAT--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACGACCTGTATTATTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTTGGCCCAACCTGTGTTCCATGGTGAATTCAGACAGT----------AAATATAAGCACCTGTTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934481 192 + 190429646 AAGAAATTGAGCTCATCTTTATATAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGGTGTTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTGTG-TCCATGGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187881938 192 + 189454096 AAGAAATTGAGCTCATCTTTATATAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGGTGTTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTGTG-TCCATGGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259696 192 - 25927173 AAGAAATTGAGCTCATCTTTATATAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGGTGTTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTGTG-TCCATGGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299312 192 + 4669795 AAGAAATTGAGCTCATCTTTATATAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGGTGTTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGACCCAACCTGTG-TCCATGGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258282 191 + 135778131 AAGAAATTGAGCTCATCTTTATATAGATTCATTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGT-TTATTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTATG-TCCATAGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691738 192 - 2847728 AAGAAATTGAGCTCATCTTTATATAGATTCACTTCCTTTTAGTTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGCTGAACAACCTGTGGTGTTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTGTG-TCCATGGTGAATTCAGACAGT----------AAATAGAAGCACCTGTTTTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 817886 192 + 2368649 AAGAAATTGACCTCGTCTTTATATAGATTCACTTCCTTTTAATTTTCTTTCAACACAC--TCATCCAAAATTTGGTTGTGTTGTTTTTCTGATGAACAACCTGTGTTATTCTCCTTTCTTTT-------------------CCAAATCTCCACATTTCGGCCCAACCTGTG-TCCACGGTGAATTCAGACAGT----------AAATACAAGCACCTGTTTTCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571343 159 - 190850796 AAGAAATTGAACTCATTTTTATATAGATTCACTTCCTTTTAATTTTCTTTCCACACAT--TCATGCAAAATGTGGTTGTGATGTTTTTCTGCGGG-----------------------------------------------------TCCACATCTTGGCCCAACCCATGTTCCACGGTGAATTCGGACAGT----------AAATCCAAGCACCTATATTCC i calJac3.chr3 I 170 C 0 s saiBol1.JH378165 13056320 193 - 14256875 AAGAAATTGAACTCATTTTTATATAGATTCACTTCCTTTTAATTTTCTTTCCACACAT--TTATGCAAAATGTGGTTGTGTTGTTTTTCTGCGGGACAACCCACATTATTCTCCTTCCTTTT-------------------CTAAATCTCCACATTTTGGCCCAACCCGTGTTCCATGGTGAATTCAGACAGT----------AAATTCAAGCACCTATTTTCC i saiBol1.JH378165 I 170 C 0 s cebCap1.NW_016107886v1 945327 192 - 2196201 AAGAAATTGAACTCATATGTATATAGATTCTCTTCCTTTTAATTTTCTTTCCACACAT--TTATGCAAAATGCGGTTGTGTTGTTTTTCTGCAGA-CAACCCGTATTATTCTCCTTCCTTTT-------------------CTAAATCTCCACATTTTGGCCCAAGCCGTGTTCCATGGTGAATTCAGACAGT----------AAACACAAGCACCTATTTTCC i cebCap1.NW_016107886v1 I 170 C 0 s aotNan1.NW_018492112v1 3341093 192 - 5030052 AAGAAATTGAACTCATTTTTATATAGATTCACTTCCTTTTAATTTTCTTTCCACACAT--TTATGCAAAATGTGGTTGTGTTGTTTTTCTGCGGA-CAACCTGCGTTATTCTCCTTCCTTTT-------------------CTAAATCTCCACATTTTGGCCCAACCCGTGTTTGATGGTGAATTCAGAGAGT----------AAATCCAAGCACCTATTTTCC i aotNan1.NW_018492112v1 I 172 C 0 s canFam3.chr16 16882688 213 - 59632846 AAGAAATTGAACTCACCTTTATATAAATTCATTTCTTTTCAATTTTTTCTTCCCATAA--TTTTCTAAAATTC------ATTGCTTTT-TGCTAAACATCCTATATAAGTTTCTTCCCCTCTCCCTGCAACTGCCCGCCCCCCCAATCTCCATGTTTTGGCCCAACCTGTGTTCCTTGGTAAATAC--ATGGTCTTTCTCCTGGAGTACAAGAATCTCTTTTCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389646 177 - 2520184 -------------CATCTTTACTTATATTTGTCTCCTTCGAATTTT-TTTCTACCCACCATCTTCCAAAACTAGGTT---TTGTTTTTCTCCTAAACAGCCAATATGATTCTCCTTTCTTTT-------------------CCACATCTCCACATTTTGGCCGAACTTGTGTTCCTCGATTAATA-AGGTATC----------ATTCTCCTGGGCCCCTTTTCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3893192 472 + 3993831 I e micMur3.chr14 17472643 468 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=3812395.000000 s hg38.chr4_KI270789v1_alt 54220 273 + 205944 AAGTGCCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATAGATTATTGTTTAGT-CATTGCAG-------ATCCTGTTATTCTTCC-Cag-caaacaacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgtaatttaatttta---------------tttcatgtacttttatcccaatgtacatttcaatttGGGACCcagaccaaaatagccattcaagtgcgaggggtttattttgtagatgat s panTro5.chr4 192845379 273 + 194502333 AAGTGCCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATAGATTATTGTTTAGT-CATTGCAG-------ATCCTGTTATTCTTCC-CAG-caaacaacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgtaatttaatttta---------------tttcatgtacttttatcccaatgtacatttcaatttGGGACCCAGACCAAAATAGCCattcaagtgcgaggggtttattttgtagatgat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729633 273 + 195804263 AAGTGCCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATAGATTATTGTTTAGT-CATTGCAG-------ATCCTGTTATTCTTCC-CAG-caaacaacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgtaatttaatttta---------------tttcatgtacttttatcccaatgtacatttcaatttGGGACCCAGACCAAAATAGCCattcaagtgcgaggggtttattttgtagatgat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766165 273 + 4876863 AAGTGCCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAGTTTTGTAGTTGACTTCTTTTCTCTAATAGATTATTGTTTAGT-CATTGCAG-------ATCCTGTTATTCTTCC-Aag-caaacaacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgtaatttaatttta---------------tttcatgtacttttatcccaatgtacatttcaatttGGGACCcagaccaaaatagccattcaagtgcgaggggtttattttgtagatgat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651643 273 + 115148730 AAGTGCCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTGTTGTTTAGT-CATTGCAG-------ATCCTGTTATTCTTCC-Aag-caaacaacctccaagtttcactggcttacaataaataaaatttatttcttgcttatgtaatttaatttta---------------tttcatgtacttttatcccaatgtacatttcaatttGGGACCcagaccaaaatagccattcaagtgcaagtggtttattttgtagatgat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934673 273 + 190429646 AAGTGTCGTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGTTATTCTTCC-AAG-CAAACGACCTCAAACTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGTTGTAATTTAATTTTA---------------TTTCATGTACTTTTATCCCAACGTACATTTCAATTTGGGACCCAGACCAaaataggcattcaagtgcaaatggtttattttgtcaatgat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882130 273 + 189454096 AAGTGTCGTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGTTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGTTGTAATTTAATTTTA---------------TTTCATGTACTTTTATCCCAACGTACATTTCAATTTGGGACCcagaccgaaataggcattcaagtgcaaatcgttaattttgtcaatgat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24259888 273 - 25927173 AAGTGTCTTCTTTGTTATTTATAACACCATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGTTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGTTGtaatttaatttta---------------tttcatgtacttttatCCCAACGTACATTTCAATTTGGGACCCAGAccgaaataggcattcaagtgcaaatggttaattttgtcaatgat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299504 273 + 4669795 AAGTGTCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGGTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGTTGTAATTTAATTTTA---------------TTTCATGTACTTTTATCCCAACGTACATTTCAATTTGGGACCCAGACCAaaataggcattcaagtgcaaatggtttattttgtcaatgat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258473 273 + 135778131 AAGTGTCTTCTTTGTTATTTATAACACAATGCTTTTTATTCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGTTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGGTGtaatttaatttta---------------tttcatgtacttttatCCCAACGTACATTTCAATTTGGGACCcagaccaaaataggcattcaagtgcaaatggtttattttgtcaatgat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2691930 273 - 2847728 AAGTGTCTTCTTTGTTATTTATAACACAATGCTTTTTATCCCAATTTTGTAGTTGACTTCTTTTCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGGTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTGTTGtaatttaatttta---------------tttcatgtacttttatCCCAACGTACATTTCAATTTGGGACCcagaccaaaatagacattcaagtgcaaatggtttattttgtcaatgat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 818078 273 + 2368649 AAGTGTCGTCTTTGTTATTTATAACACAATGCTTTTTATTCCAGTTTTGTAGTTGACTTCTTTCCTCTAATATATTATTGTTTAGT-CATTACAG-------ACCCTGTTATTCTTCC-AAG-CAAACGACCTCAAAGTTTCACTGGCTGACAATAAATAAACTTTATTTCTTGCTTGTGTAATTTAATTTTA---------------GTTCATGTACTTTTACCCCAATGTACATTTCAATTTGGGACCcagaccaaaataggcattcaagtgcaaatagtttattttgtcaatgat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189571502 273 - 190850796 AGGTGCCTTCTTTGTTATTTATAACACAATCCTTTTTGTTCCAATTTTAGCGTTGACTTCTTTTCTCTAATATATTATTTTttagt-cattacag-------gccctgttattcttcc-gag-caaatgacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgTAATTTAATTTTA---------------TTTCATGTGCTTTTATCCCAATGTACATTTCAATTTGGGACCCAGACCAAAATGGCCattcaagtgaaagcggtttatttagtagacaat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13056513 273 - 14256875 AGGTGCCTTCTTTGTTATTTATAACACAATCCTTTTTATTCCAATTTTGTCGTTGACTTCTTTTCTCTAATAGATTATTTTTTAGT-CATTTCAG-------GCCCTCTTATTcttct-gag-caaatgacctcaaagtttcactggcttgcaataaataaaatttatttcttgcttgtgtAATTTAATTTTG---------------TTTCATGTCCTTTTATCCCAATGTACATTTCAATCTGAGACCcagaccaaaatagccattcaagtgaatgtggttcatttagtagatgat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945519 273 - 2196201 AGGTGCCTTCTTTGTTATTTATAACACAATCCTTTTTATTCCAATTTTGTCGTTGACTTCTTTTCACTAATAGATTATTTTTTAGT-CATTTCCG-------GCCCTGCTATTcttct-gag-caaatgacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgtAATTTAATTTTA---------------TTTCATGTGCTTTTATCCCAATGTACATTTCAATCTGGGACCCAGACCAAAATAGCCATTCAAGTGAAAGTGGTTCGTTTAGTAGACAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341285 273 - 5030052 AGGTGCCTTCTTTGTTATTTATAACACAATCCTTTTTATTCCAATTTTGTCGTTGACTTCTTTTCTCCAATATATTATTTTttagt-cattacag-------gccctgttattcttct-gag-caaatgacctcaaagtttcactggcttacaataaataaaatttatttcttgcttgtgTAATTTAATTTTA---------------TTTCATGTGCTTTTATCCCAATGTACATTTCAATTTGGGACCCAGACCAAAATAGCCattcaagtgaaagtggtttatttagtagacgat i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17473111 274 - 93316391 AAGTGCCTTCTTTTTTATTTATAACACAGTGCCTTTTATTATAATTTTATAGTCAACTTATTTTCCCTAATATATTACTTTtcagt-cagtacag-------attctgttactcttcaggag-caaatggccccaaagtttcagcgatttacgacaaataaaatttatttcctgcttgtgTAATTTCATTTCA---------------TTTTGTGTACTTTCATCCCACAGTACATTTCAATTTGTGCCCCAGACCAAAATAGCCACtcaagtccaagtggtttattttgtaaatgat i micMur3.chr14 I 468 I 844 s proCoq1.NW_012145301v1 3893664 274 + 3993831 AAGTGCCTTCTTTTTTATCTGCAACACAGTGCCTTTTATTATAATTTCATAGTCAACTTATTTTCCCTACTATATTACTTTtcagt-cagtacag-------attctgttactcttcaggag-caaatggcctcaaagtttcagtggtttacgataaataaaatttatttcctgcATGTGTAatttcatttca---------------tttcatgtactttcatCCCAAAGTACATTTCAATTTGTGACCCAGACCAAAATAGCCACtcaagtccaagtggtttgttttgtaaatgat i proCoq1.NW_012145301v1 I 472 C 0 s canFam3.chr16 16882901 278 - 59632846 -AATACCCTCTTTGGTATTTATAATAC---GTCTTTTATCCTAATTTTATAGATGCCCTCTTTTCCCTAATATACTAGTTTTTAGTATATTAAAAACTAGTTACTCTgttactcttca-gggacaaatgatctcatagtttcagtggcttactataagtaaagtttatttcttactcatgtAATTTTATTTTA---------------TTTAATGTGCTTTTATCCCAATGTATATTTTAATTTGGGACCCAGACCAAAATGGCCattcaagtgtaagtggtttattttacaggagat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1389823 282 - 2520184 AAGTGCCTTCTTTGTTATTTATAATAAAATGTCTTTTATTGTAATTTTATAGGTGACTTTTTTTC-CTGATATATTGTTTTT--gt-cagtgcaa-------g--ctgttattctgcaggaa-caaatgatttcaaagtatcagtggcttacaataaatgaagtttattttttgctcatgTAatttcatttcatgaaatttcattttgtttcatggaatttcattccaa-gtacatttcaattTGGAACCTGTACCaaaccag-cactcaagtacaagtggtttattttgtaggtgat i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=1372750.000000 s hg38.chr4_KI270789v1_alt 54493 147 + 205944 ccgaaaagaata-g-gaagtgagatagggaag-----aaaataatgac---aaaaaaggctttattttcaagggcgttatcactgtggacaactggagcttaatcctactgcggaaaccgagaagc---------------------------------------------------------------cagggtaaaatgtgtacct--gagt----------------a----------------atcccac s panTro5.chr4 192845652 147 + 194502333 ccgaaaagaata-g-gaagtgagataggggag-----aaaataatgac---aaaaaaggctttattttcaagggcgttatcactgtggacaactggagcttaatcctactgcggaaactgagaagc---------------------------------------------------------------cagggtaaaatgtgtacct--gagt----------------a----------------atcccac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192729906 147 + 195804263 ccgaaaagaata-g-gaagtgagataggggag-----aaaataatgac---aaaaaaggctttattttcaagggcgttatcactgtggacaactggagcttaatcctactgcggaaactgagaagc---------------------------------------------------------------cagggtaaaatgtgtacct--gagt----------------a----------------atcccac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766438 147 + 4876863 ccgaaaagaaaa-g-gaagtgagataggggag-----aaaataatgac---aaaaaaggctttattttcaagggtgttatcactgtggacaactggagcttaatcctactgcggaaaccgagaagc---------------------------------------------------------------cagggtaaaatgtgtacct--gagt----------------a----------------atcccac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112651916 163 + 115148730 ctgaaaataata-g-gaaatgagatagggaag-----aaaataatgac---aaaaaaggctttattttcaagggcattatcactacggacaactggagcttaatcccactgtggaaactgagaagc---------------------------------------------------------------cagggtaaaatgtgtacct--gagt----------------aatcctacccgtgggtcatcccac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188934946 137 + 190429646 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgag---aaaaaaggctttattttcaagggcgtcatcactgtggacaacaggagcttaaccctcctgtggaagccgagga-c---------------------------------------------------------------cagggtaaaatgtgtagct--gagt---------------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882403 137 + 189454096 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaaggctttattttcaagggcgtcatcactgtggacaacaggagcttaaccctcctgtggaagccgagga-c---------------------------------------------------------------cagggtaaaatgtgtagct--gagt---------------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260161 137 - 25927173 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaaggctttattttcaagggcgtcatcactgtggacaacaggagcttaaccctcctgtggaagccgagga-c---------------------------------------------------------------cagggtaaaatgtgtagct--gagt---------------------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299777 138 + 4669795 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaaggctttattttcaagggcgtcatcactatggacaacaggagcttaatcctcccgtggaaaccgaggagc---------------------------------------------------------------cacggtaaaatgtgtagct--aagt---------------------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258746 146 + 135778131 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaaggctttattttcaagggcatcatcactatggacaacaggagcttaatcctcctgtggaaactgaggagc---------------------------------------------------------------cggtgtaaaatgtgtagct--gagtaatccctc-------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692203 138 - 2847728 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaaggctttattttcaagggcgtcatcactgtggacaacaggagcttaatcctcctgtggaaaccgaggagc---------------------------------------------------------------cacggtaaaatgtgtagct--gagt---------------------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 818351 146 + 2368649 ctgagaagaaca-g-gaagtgagataggg-ag-----aaaataatgac---aaaaaagcctttattttcaagggcgtcatcactatgaacaacaggagcttaatcctcctgtggaaaccgaggagc---------------------------------------------------------------cagggtaaaatgtgtagct--gagt--------aatcccac------------------------ i colAng1.NW_012116221v1 C 0 M 2079 s calJac3.chr3 189571775 209 - 190850796 ccgtaaagaata---gaagtgagatagggaag-----aaaatactgac---aaaaacggctttatttccaagggtgttatcaccatgggcaactggagcttaatcctactgtggaaatctagaagccacggtaaaatgcatccttgagtaatcccacccacgggccaagggaattgtaacatttacacacacggtaaaatgcgtcctt--gagt----------------a----------------atcccac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13056786 151 - 14256875 ccataaagaata---gaagtgagatagggaagaaaataaaatactgac---aaaaaaggctttattttcaagggtgttatcaccatgggcaactggagcttaatcctgctgtggaaatctagaagc---------------------------------------------------------------cagggtaaaatgcgtcttt--gagt----------------a----------------gtcccac i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945792 146 - 2196201 CCGTAAAGAATA---gaagtgagatagggagg-----aaaatactgac---aaaaaaggctttattttcaagggtgttatcaccatgggccactggagcttaatcctactgtggaaatctagaagc---------------------------------------------------------------cagggtcaaatgtgtcctt--cagt----------------a----------------atcccac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341558 146 - 5030052 ccgtaaagaata---gaagtgagatagggaag-----aaaatactgac---gaaaaaggctttattttcaagggtgttatcaccacgggcaactggagcttaatcctactgtggaaatctagaagc---------------------------------------------------------------cagggtaaaatgcgtccct--gagt----------------a----------------atcccac i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3893938 148 + 3993831 tgcaggagaataaa-gaagtgagacagggaag-----gaaataaagat---aaaaaaggcttcattttccagcaagttattactatgggcaatgagagcttaattctcctgtggaactctaggcac---------------------------------------------------------------tatggtaaaacacccacct--gagt----------------a----------------atcctgc i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16883179 144 - 59632846 tccaagagacta-a-gaa---agacagggaag-----gaaataaaagcttttgaaaagccttcattttgaagcaagtgaccaccatggacaactg--gtttaatcttcctatggaactatagga-a---------------------------------------------------------------cagggaaaaatatgcacct--gaat----------------a----------------aaactac i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1390105 150 - 2520184 ctcaggagaaca-gagaagtgagacaggaaag-----gaaatgaagct---gaaaaagatttcattttcaagcaagctaccattatagacaactagagcttaactctcctggggcactctaggcgc---------------------------------------------------------------ctgctcaaaccatgcacctccgaat----------------a----------------atcctac i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17473385 844 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=2264053.000000 s hg38.chr4_KI270789v1_alt 54640 254 + 205944 ccgtgggccaaggtaattgtaat-----atttacacaccaatttccatcagccattggtcgtggctgtacctatgagtgatcactttccagcatttcaggcctaga--aaaagtagccaaggaggtttcagagtcagagaaagccctcgtg----------c-agaaaatgtacatgctagcatttacaaatcagtcaggtatgcatcgatgtggttagagtaaaaggacatagAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA s panTro5.chr4 192845799 254 + 194502333 ccgtgggccaagggaattgtaat-----atttacacaccaatttccatcagccattggtcgtggctgtacctatgagtgatcactctccagcatttcaggcctaga--aaaagtagccaagaaggtttcagagtcagagaaagccctcgtg----------c-agaaaatgtacatgctggcatttacaaatcagtcaggtatgcattgatgtggttagagtaaaaggatatagAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730053 254 + 195804263 ccgtgggccaagggaattgtaat-----atttacacaccaatttccatcagccattggtcgtggctgtacctatgagtgatcactctccagcatttcaggcctaga--aaaagtagccaagaaggtttcagagtcagagaaagccctcgtg----------c-agaaaatgtacatgctggcatttacaaatcagtcaggtatgcattgatgtggttagagtaaaaggatatagAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766585 254 + 4876863 ccgtgggccaagggaattgtaat-----atttacacaccaatttccatcagccattggtcgtggctgtacctatgagtgatcactctccagcatttcaggcctaga--aaaagtagccaagaaggtttcagagtcagagaaagccctcgtg----------c-agaaaatgtacatgctggcatttacaaatcagtcaggtatgcatcaatgtggttagagtaaaaggatatagAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652079 253 + 115148730 ccgtgggccaagggaattgtcat-----atttacacaccaatttccatcagccactggttgtggctgtacctatgagtgatctctctccagcatttcagtcctaga--aaaagtagccaagaaggtttcagagtcagagaaagccctcatg----------c-agaaaatggacatgctggcatttac-aatcagtcaggtatgcattgatgtggttagagtaaaaggatatagAGAGGAAGCCACTAAATCCATCCAGGAATAAACAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935083 237 + 190429646 ---------gagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaaagtagccaagaaggtttcagggtcggagaaagccctcatg----------c-agaaaatgtacatgctggcatttacaaatcagtcagatatgcattgatgtggGTGGAATAAAAGGACATAGAGAGGAATCCACTAAATCCATCCAGTAAT--------A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882540 241 + 189454096 ---------gagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaaagtagccaagaaggtttcagagtcggagaaagccctcatg----------c-agaaaatgtacatgctggcatttacaaatcagtcagatatgcattgatgtggGTGGAATAAAAGGACATAGAGAGGAATCCACTAAATCCATCCAGTAAT----AAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260298 236 - 25927173 ---------gagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaaagtagccaagaaggtttcagagtcggagaaagccctcatg----------c-agaaaatgtacatgctggcatttacaaatcagtcagatatgcattgatgtggGTGGAGTAAAAGGACATAGAGAGGAATCCACTAAATCCATCCAGTAAT--------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3299915 245 + 4669795 ---------gagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaaagtagccaagaaggtttcagagtcggagaaagccctcatg----------c-agaaaatgtacatgctggcatttacgaatcagtcaggtatgcattgatgtggGTGGAGTAAAAGGACATAGAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134258892 254 + 135778131 tggtgggccaagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaaagtagccaagaaggtttcagagtcggagaaagccctcata----------c-agaaaatgtacctgctggcatttacaaatcagtcaggtatgcattgatgtggGTGCAGTAAAAGGATATAGAAAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692341 245 - 2847728 ---------gagggaattgtaat-----atctacacaccaatttccgtcagccattggttgtggctctacctatgcgtgatcactctccagcattttgggcctaga--aaatgtagccaagaaggtttcagagtcggagaaagccctcatg----------c-agaaaatgtacatgctggcatttacgaatcagtcagatatgcattgatgtggGTGGAGTAAAAGGACATAGAGAGGAATCCACTAAATCCATCCAGGAATAAACAAATA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189571984 248 - 190850796 ccacgggccaagggaattgtaac-----atttacacaccaattaccatcagccattgattgcagctgtactgatgagtgatcactctctggcatttcgggcctaga--aaaggtagccaagagggcttcagagtcagaaaaagccctcgtg----------c-agaagatgcacgtgctggcacttacagatcagtcagatatgcCTTCATG-GGTTAGAGTAAAAGGAGATAGAGTGGAATCCACGAAATCCATCCAGGAATAAAC----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13056937 248 - 14256875 ccatgggccaacggaattgtaat-----atttacaca-caattaccattagccgttgattgtagctgtactgatgagtgatcactcttcggcatttcgggcctaga--aaaggtagccaggaaggtttcagagtcagagctagccctcgtg----------c-agaagatgctcgtgctggcatttacagatcagtcaggtatgccttcacgtgatgagagtcaaaggagatagagcagggTCCACGCAAGCCCTCCAGGAATAAAC----- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 945938 249 - 2196201 ccatgggccaagggaattgtaat-----atttgcacaccaattaccatcagccattgattgtagctgtaccgatgagtgatcactctctggcatttcgggcctaga--aaaggtagccaagaaggcttcagagtcagagaaagccctcgtg----------c-agaagatgcacatgctggcatttccagatcagccaggtatgcCTTCGTGTGCTTAGAGTAGTAGGAGTTAGAGCAGAATCCATGAAATCCACCCAGGAATAAAC----- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341704 238 - 5030052 ccatggaccaagggaattgtaat-----atttacacaccaattaccatcaaccattgattgtagctgtaccgatgagtgatcactctctggcatttcggacctaga--agaggtagccaagaaggcttcagagtcagagaaagccctcgtg----------c-agaagatgcacgtactggcatttACACATCA-TCAGGTATGCCTTCATG--------ATAAAAGGAGACAGAGCAGAATCCACGAAATCCCTCCAGGAATAA------- i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3894086 252 + 3993831 ccaagggccaagggagttgtgct-----atttaaacatgaatcttcatcagccattggtggaggctgcatctctgagtgttcgttctcc-gtagttcaggccgaga--gaaggtacccaaaagggcttccaagtcagagaaagccctcatg----------c-aaaaaatgcacagact-gcatttgcaaattagtcagctgtgcattgatatggttagagAAAAAAGTGACAGAGAGAAATCCACTAAATCCATCAAGGAAAAAACAAATA i proCoq1.NW_012145301v1 C 0 I 10 s canFam3.chr16 16883323 260 - 59632846 tcaagagtcaa-gtaattctacctaagaaattacataccaatttccatcagccattggttgagccagcacccatcattattcactcttcagtattttatgtctagagtgaagccggccaagaaagcttcagagtc--agaaagcctttaaggaaaaaaaaaa-aaaaaatgcatatgctggcatttgtatgtcaaagaagtgtgcact------gtaagagcaaagggatatggAGAGAAACATGCTAAATCTATTAAAAAATAAAGGAA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1390255 217 - 2520184 ccaagcagcaaggaagttgtgat-----gtttatCT--CAGCTGCTACCAAATGCCAGTTGCGGCTACAGTC-TAAGCATTCATTCCTTGGTGTTTGAGGCCAAGC----------------GGGATCCAGAGCCAGGGAAAG-CTTCATG----------CGAGGACATGCA-GTGCGGGCATTTCACGGTCAG---GCTGCGTGCTGATGCGACAGGCCTAAGGGAAATGGGACAGAAACCGA--AAGTCAAAGCA-------------- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17473385 844 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=27805.000000 s hg38.chr4_KI270789v1_alt 54894 18 + 205944 AAATAGG-AAAAAAAAACC s panTro5.chr4 192846053 18 + 194502333 AAATAGG-AAAAAAAAACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730307 18 + 195804263 AAATAGG-AAAAAAAAACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766839 17 + 4876863 AAATAGG--AAAAAAAACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652332 17 + 115148730 AAATGGG--AAAAAAAACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935320 17 + 190429646 AAATAGG--AAAAAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882781 17 + 189454096 AAATAGG--AAAAAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260534 17 - 25927173 AAATAGG--AAAAAAAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300160 17 + 4669795 AAATAGG--AAAAAAAAAA i cerAty1.NW_012001672v1 C 0 I 3 s chlSab2.chr7 134259146 19 + 135778131 AAATAGGAAAAAAAAAACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692586 17 - 2847728 AAATAGG--AAAAAAAACC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572232 5 - 190850796 --------------ACACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057185 5 - 14256875 --------------ACACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946187 5 - 2196201 --------------ACACC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341942 5 - 5030052 --------------ACGCC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16883583 18 - 59632846 AAACAAA-TAGTAAAAGTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1390472 14 - 2520184 AAAAAGG--GAAGAAC--- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3894338 10 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=322219.000000 s hg38.chr4_KI270789v1_alt 54912 43 + 205944 CACTGTTGACATAAGTTAATACTTTTATTTTACCACTATTTCT s panTro5.chr4 192846071 43 + 194502333 CACTGTTGACATAAGTTAATACTTTTATTTTACCACTATTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730325 43 + 195804263 CACTGTTGACATAAGTTAATACTTTTATTTTACCACTATTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766856 43 + 4876863 CACTGTTGACATAAGTTAATACTTCTATTTTACCACTATTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652349 43 + 115148730 CACTGTTGACATAAGTTAATACTTTTATTTTGCCATTATTGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935337 39 + 190429646 CACTGTTGAGATAAGTTAATACTTTTATTTTACCACTG----T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882798 39 + 189454096 CACTGTTGAGATAAGTTAATACTTTTATTTTACCACTG----T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260551 39 - 25927173 CACTGTTGAGATAAGTTAATACTTTTATTTTACCACTG----T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300180 39 + 4669795 CACTGTTGAGATAAGTTAATACTTTTATTTTACCACTG----T i cerAty1.NW_012001672v1 I 3 C 0 s chlSab2.chr7 134259165 43 + 135778131 CACTGTTGAGATAAGTTAATACTTTTATTTTGCCACTATTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692603 39 - 2847728 CACTGTTGAGATAAGTTAATACTTTTATTTTACCACTG----T i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572237 38 - 190850796 AGCTGCTGAGATAATGTAATGCTTCTG-----CCACTGTCTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057190 38 - 14256875 CACTGCCGAGATCATGTAATACTTCTA-----GCACTGTGTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946192 38 - 2196201 CACTGCTGAGATAATGTAATGCCTCTA-----CCACTGTTTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341947 38 - 5030052 CACTGCTGAGATAATGTAATACTTCCA-----CCACTATTTAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3894348 43 + 3993831 CACTGTTGAGATAATTTAATAATTTTGTTTTGCCACTATTTCT i proCoq1.NW_012145301v1 I 10 I 405 s canFam3.chr16 16883601 42 - 59632846 -TGTTTTGAGATCATTTAATAATTTAATTTTACCACTGTTTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1390486 43 - 2520184 CACTGCTGAGATGTTGTAATAGTTTCATCTTATCTCCACTGCT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17473385 844 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=1307252.000000 s hg38.chr4_KI270789v1_alt 54955 159 + 205944 TTC---TTTA----GCCCTTTTATTCAGTTACGGCTACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTATGCATTAACTCAAATTCTATATTTGTAGTAACTAAA--ACACGCC---TTATT--TTTCAT----------CTCTATGCTATTCCCTCCCCTTTCCCCAGTTTCTC s panTro5.chr4 192846114 159 + 194502333 TTC---TTTA----GCCCTTTTATTCAGTTACGGCTATTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTATGCATTAACTCAAATTCTATATTTGTAGTAACTAAa--acacgcc---ttatt--tttcat----------ctctatgctattccctcccctttccccagtttctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730368 159 + 195804263 TTC---TTTA----GCCCTTTTATTCAGTTACGGCTATTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTATGCATTAACTCAAATTCTATATTTGTAGTAACTAAa--acacgcc---ttatt--tttcat----------ctctatgctattccctcccctttccccagtttctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3766899 159 + 4876863 TTC---TTTA----GCCCTTTTATTCAGTTACGGCTACCTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTATGCATTAACTCAAATTCTATATTTGTAGTAACTAAA--ACACGCC---TTATT--TTTCAT----------CTCTATGCTATTCCCTCCCCTTTCCCCAGTTTCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652392 158 + 115148730 TTC---TTGA----GCCCTTTTATTCAGTCACAGCCACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTATGCATTAACTCAAATTCTATATTTGTAATAACTAAA--ACATGCC---TTATT--TTTCAT----------CTCTATGCTATTGCCTCCCCTTT-TCCAATTTCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935376 157 + 190429646 TGC---TTTA----GCCTTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTGTGCATTAACTCAAGTTCAATATTTGTAGTAACTAAA--CCATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882837 157 + 189454096 TTC---TTTA----GCCTTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTGTGCATTAACTCAAGTTCAATATTTGTAGTAACTAAA--CCATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260590 157 - 25927173 TTC---TTTA----GCCTTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGTGTGCATTAACTCAAGTTCAATATTTGTAGTAACTAAA--CCATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300219 156 + 4669795 TTC---TTTA----GCCCTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTAGGTAGTGTGCAAATTTTACAGT-TGCATTAACTCAAGTTCAATATTTGTAGTAACTAAA--CCATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259208 157 + 135778131 TTC---TTTA----GCCCTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTAGGTAGCGTGCAAATTTTACAGTATGCATTAACCCAAATTCAATATTTGTAGTAATTAAA--ACATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692642 157 - 2847728 TTC---TTTA----GCCCTTTTATTCAGTCAT--CTACTTGTGTACATTAGGTGGGTAGTGTGCAAATTTTACAGTGTGCATTAACTCAAGTTCAATATTTGTAGTAACTAAA--CCATGCC---TTGTT--TTTCAT----------CTCTCTGCTATTCCCTCCCTTTTCCCCAATTTCTC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572275 159 - 190850796 TTC---TTTAGCCCGCCCTTTCATTCAATCGT--CCGCTTGCGCACGTCAGGTGGGTCACGCGCAAATGTTACAGCAGGCATTAACTCAAATTCGATATTCGTAGTAACTAAG--ACACACC---TTATT--TTTCAT----------CTCTATGGTATTCGCTCC--TCTCTGCGATTTCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057228 155 - 14256875 TTC---TTTA----GCCCTTTTATTCAGTCAT--CCACTTGTGTATGTTCGGTAGGTAATGTGCAAATTTTACAGTGGGCATTAACTCAAATTCAATATTTGTGGTAACTAAA--ACACACC---TTATT--TTTCAT----------CTCTATGCTATTCGCTCC--TCTCCGCAATTGCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946230 159 - 2196201 TTC---TTTAGCTAGCCCTTTTGTTCAGTCAT--CCACTTGTGTACATTAGGTAGGTAATGTGCAAATTTTACAGTAGGCATTAACTCAAATTCAATATTTGTAGTAACTAAA--ACACACC---TTATT--TTTCAT----------CTCTATGCTATTCGCTCC--TCTCCGCAATTTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3341985 155 - 5030052 TTC---TTTA----GCCCTTTTATTCAATCAT--CCACTTGAGTACGTTAGGTAGGTGATGTGCAAATTTTACAGTCGGTGTTAACTCAAATTCAATATTTGTAGTAACTAAA--ACACACC---TTATT--TTTCAT----------TTCTATGCTATTCGCTCC--TCTCCGCAATTTCTC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16883643 161 - 59632846 AAA---TTTA----GCTAACTCCTTCTATCAT--CTTTTTGT--------GGTAGCTGATGTGGAAATCTTATAGCATGCGTTAATTTTCACCCTCCCCCCATTATGttttagtcccatgac---ttatgtattccataactggaagcctgtttattctactctcc--ttcacccatcttccc i canFam3.chr16 C 0 I 423 s dasNov3.JH570353 1390529 154 - 2520184 TTCAAAATTA----ACTCTTTC-TTCTATCAC--CTACCTG----CATTAGGC---TGATGTGGAAAT-TCACAGCATGCATTAATACTTGTCATATATTTAGGTTCACAAGA--ACACACCAAATTTTT--TTACGT----------TTCTGtgctctgcccccatctttccctaaattctc i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=596883.000000 s hg38.chr4_KI270789v1_alt 55114 69 + 205944 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTCCCTAAAGTGATGTTTTTACAATAAAGTCTCTCCTA s panTro5.chr4 192846273 69 + 194502333 tgtgtatgaagctcgactgacttgtcaaaagctccctaaagtgatgtttttacaataaagtctttccta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730527 69 + 195804263 tgtgtatgaagctcgactgacttgtcaaaagctccctaaagtgatgtttttacaataaagtctttccta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767058 69 + 4876863 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTCCCTAAAGTGATGTTTTTACAATAAAGTCTTTCCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652550 69 + 115148730 TGTGTATGGAGCTCAACCAATTTGCCAAAAGCTCCCTCAAATGATGATTTTACAATAAAGTCTTTCTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935533 69 + 190429646 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAATAAAATCTTTCCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187882994 69 + 189454096 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAATAAAATCTTTCCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260747 69 - 25927173 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAATAAAATCTTTCCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300375 69 + 4669795 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAATAAAATCTTTCCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259365 69 + 135778131 TGTGTATGAAGCCCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAATAAAATCTTTCCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692799 69 - 2847728 TGTGTATGAAGCTCGACTGACTTGTCAAAAGCTACCTCAAATGATATTTTTACAGTAAAATCTTTCCTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572434 69 - 190850796 TGTGTATGAAACGCAACTGACTTGTCAAAAACTACCTCAAATGATGGTGTTACAATAAAGACTTCCCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057383 69 - 14256875 TGTGTATGAAACTCCACTGACTTGTCAAAAACTACCTCAAATGATAGCATTACAATAAAGACTTCCCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946389 69 - 2196201 TGTGTATGAAACTCAACTGTCTTGTCAAAAACTACCTCAAATGATAGTATTATAATAAAGACTTCCCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342140 69 - 5030052 TGTGTATGAAACTCAACTGACTTGTCAAAAACTACCTCAAATGATAGTATTACAATAAAGACTTCCCTA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1390683 69 - 2520184 tgtatgtgaaacctggctgattcttcaaggcctgtctcaaatggcacctctttcaaaaagacttccttA i dasNov3.JH570353 C 0 I 532 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=1008981.000000 s hg38.chr4_KI270789v1_alt 55183 119 + 205944 AACTTCAGTTAGGATCAATCACTCTCTACTGGCTGCTCCTGTAGAATTTTATCTGTAGTTTTGTTTTGTCATCTTATCACTTTATAATATTATTTACAATCTGTCTGTTAATGTATTGT s panTro5.chr4 192846342 119 + 194502333 aacttcagttaggatcaatcactctctactggctgctcctgtagaattttatctgtagttttgttttgtcatcttatcaCTTTATAATATTATTTACAATCTGTCTGTTAATGTATTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730596 119 + 195804263 aacttcagttaggatcaatcactctctactggctgctcctgtagaattttatctgtagttttgttttgtcatcttatcaCTTTATAATATTATTTACAATCTGTCTGTTAATGTATTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767127 119 + 4876863 AACTTCAGTTAGGATCAATCACTCTCTACTGGCTGCTCCTGTAGAATTTTATCTGTAGTTTTGTTTTGTCATCTTATCACTTTATAATATTATTTACAATCTGTCTGTTAATGTATTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652619 114 + 115148730 AACTTTAGTTAGAATCAATCACTCTCTACTGGCTGCTCCTGTAGAATTTTATCTGTA-----GTTTTGTCATCTTATCACTTTATAATATTATTTACAATCTGTCTGTTAATGTATTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935602 119 + 190429646 AACTTTAGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTGTCTATAGTTTTGTTTTGTCATCTTATCACGTTATATTATTATTTACAATCTGTCTGTTAACATATTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883063 119 + 189454096 AACTTTAGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTGTCTATAGTTTTGTTTTGTCATCTTATCACGTTATATTATTATTTACAATCTGTCTGTTAACATATTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260816 119 - 25927173 AACTTTAGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTGTCTATAGTTTTGTTTTGTCATCTTATCACGTTATATTATTATTTACAATCTGTCTGTTAACATATTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300444 119 + 4669795 AACTTTAGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTGTCTATAGTTTTGTTTTGTCATCTTATCACGTTATATTATTATTTACAATCTGTTTGTTAACATATTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259434 119 + 135778131 AACTTTGGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTATCTGTAGTTTTGTTCTGTCATCTTATCACGTTATAATATTATTTACAATCTGTCTGTTAACATACTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692868 119 - 2847728 AACTTTAGTTAGAATCTATCACTTTCTACTGGCTGCTCCTGTAGAATTTTATCTATAGTTTTGTTTTGTCATCTTACCACGTTATAATATTATTTACAATCTGTCTGTTAACATATTGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572503 119 - 190850796 AACTTTAGTTAGAATCAATCACTCTCTACTGGCTGCTCCTGCAGAACTTTACCTATAGTTTTGTTTTGTCATTTTATCACATTATAACATTATTTATGGTCTGCTTATTAATATACTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057452 119 - 14256875 AACTTTAGTTAGAATCAATCACTCTCTACTGGGTGCTCCTGTGGAATTTTCCACATAGTTTTGTTTTGACATTTTATCACATTATGATACTATTTACGATCTGTCTGTTAATATATTGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946458 119 - 2196201 AACTTCAGTTAGAATCAATCACTCTCTACTGGCTGCTCCTGTAGAATTTTACCTGTAGTTCTGTTTTGTCATTTTATCACATTATAAGATCATTTACGATCTGTCTGTTAATATATTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342209 119 - 5030052 AACTTCAGTTAGAATCAATCACTCTCTACTGGCTGCTCCTGTAGAATTTTACCTATAGTTTTGTTTTGTCATTTTATCACATTATAATATTATTTGCGATCTGTCTGTTAATATATTGT i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=6600.000000 s hg38.chr4_KI270789v1_alt 55302 1 + 205944 G s panTro5.chr4 192846461 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730715 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767246 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652733 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935721 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883182 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260935 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300563 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259553 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692987 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13057571 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=772277.000000 s hg38.chr4_KI270789v1_alt 55303 177 + 205944 CACAGggctgggcgcagtggctcacacctgtaatcccagcactttgggaggctgaggtgggtggatcacgaggtcaggagttcaagaccatcctggttaacacgatgaaaccccgtctctactaaaaatacaaaaaatta-cccggcgtggtagcgggtgcctgtagtcccagctact s panTro5.chr4 192846462 177 + 194502333 AACAGggctgggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggtgggtcacgaggtcaggagttcaagaccatcctggttaacatgatgaaaccccatctctactaaaaatacaaaaaatta-cctggcgtggtggcaggtgcctgtagtcccagctact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730716 177 + 195804263 AACAGggctgggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggtgggtcacgaggtcaggagttcaagaccatcctggttaacatgatgaaaccccatctctactaaaaatacaaaaaatta-cctggcgtggtggcaggtgcctgtagtcccagctact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767247 178 + 4876863 AACAGggctgggctccgtggctcacacctgtaatactagcactttgggaggctgaggtgggtggatcacgaggtcaggagttcaaggccatcctggttaacacgatgaaaccccgtctctaataaaaatacaaaaaattagcccggcgtggtggcgggtgcctgtagtcccagctact i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652734 178 + 115148730 AACAGggctgggcgcggtggctcacgcctgtaatcccagcactttgggagcctgaggcaggtggatcacgaggtcaggagttcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaaatagccgggtgtggtggtgggcgcctgtagtctcagctaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935722 174 + 190429646 AACAGggctgggttcggtggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgagaccatcctggctaacatggtgaaaccttgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggtgcctgtagtcccaactact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883183 174 + 189454096 AACAGggctgggttcggtggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgagaccatcctggctaacatggtgaaaccttgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggtgcctgtagtcccaactact i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24260936 174 - 25927173 AACAGggctgggttcggtggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgagaccatcctggctaacatggtgaaaccttgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggtgcttgtagtcccaactact i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300564 174 + 4669795 AACAGggctgggttcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgagaccatcctggctaacatggtgaaaccttgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggtgcctgtagtccccaacact i cerAty1.NW_012001672v1 C 0 I 52 s chlSab2.chr7 134259554 174 + 135778131 AACAGggctgggttcgggggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgaggccatcctagctaacacggtgaaaccccatctctactaaaaatacaaaaagttagccaggtgtggtggtgggtgcctgtagtcccaactact i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2692988 174 - 2847728 AACAGggctgggttcggtggctcacacctgtaatcccagcactttgggaggccaaggtgggca----atgaggtcaggagatcgagaccatcctggctaacatggtgaaaccttgtctctactaaaaatacaaaaaattagccaggcgtggtggcgggtgcctgtagttccaactact i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=96989.000000 s hg38.chr4_KI270789v1_alt 55480 27 + 205944 cgagaggttgaggcaggagaaaagctc s panTro5.chr4 192846639 27 + 194502333 cgggaggttgaggcaggagaaaagctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730893 27 + 195804263 cgggaggttgaggcaggagaaaagctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767425 27 + 4876863 cgagaggttgaggcaggagaaaagctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652912 27 + 115148730 cgggaggctgaggcaggagaatggcat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935896 27 + 190429646 cgggaggctggggcaggagaatagctt i rheMac8.chr5 C 0 I 2 s macFas5.chr5 187883357 27 + 189454096 cgggaggctggggcaggagaatagctt i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24261110 27 - 25927173 cgggaggctggggcaggagaatagctt i macNem1.NW_012013133v1 C 0 I 2 s chlSab2.chr7 134259728 27 + 135778131 cgggaggctgaggcaggagaatagctt i chlSab2.chr7 C 0 I 142 s manLeu1.NW_012102221v1 2693162 27 - 2847728 cgggaggctggggcaggagaatggctt i manLeu1.NW_012102221v1 C 0 I 2 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e cerAty1.NW_012001672v1 3300738 52 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=11478.000000 s hg38.chr4_KI270789v1_alt 55507 6 + 205944 a---ccagg s panTro5.chr4 192846666 6 + 194502333 a---ccagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730920 6 + 195804263 a---ccagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767452 6 + 4876863 a---ccagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652939 9 + 115148730 gaacccggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935925 6 + 190429646 a---cccgg i rheMac8.chr5 I 2 I 7 s macFas5.chr5 187883386 6 + 189454096 a---cccgg i macFas5.chr5 I 2 I 7 s macNem1.NW_012013133v1 24261139 6 - 25927173 a---cccgg i macNem1.NW_012013133v1 I 2 I 7 s manLeu1.NW_012102221v1 2693191 6 - 2847728 a---cccgg i manLeu1.NW_012102221v1 I 2 I 7 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e chlSab2.chr7 134259755 142 + 135778131 I e cerAty1.NW_012001672v1 3300738 52 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=78604.000000 s hg38.chr4_KI270789v1_alt 55513 22 + 205944 agg------ttgca-gtaagccgagatcg s panTro5.chr4 192846672 22 + 194502333 agg------ttgca-gtgagctgagatcg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730926 22 + 195804263 agg------ttgca-gtgagctgagatcg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767458 22 + 4876863 agg------ttgca-gtgagccgagattg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652948 28 + 115148730 aggcggagcttgca-gtgagccgagatcg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935938 22 + 190429646 agg------ttgca-gtgagccgagatca i rheMac8.chr5 I 7 C 0 s macFas5.chr5 187883399 22 + 189454096 agg------ttgca-gtgagccgagatca i macFas5.chr5 I 7 C 0 s macNem1.NW_012013133v1 24261152 22 - 25927173 agg------ttgca-gtgagccgagatca i macNem1.NW_012013133v1 I 7 C 0 s cerAty1.NW_012001672v1 3300790 23 + 4669795 agg------ttgcacgtgagccgagatcg i cerAty1.NW_012001672v1 I 52 I 96 s manLeu1.NW_012102221v1 2693204 22 - 2847728 agg------ttgca-gtgagccgagatca i manLeu1.NW_012102221v1 I 7 C 0 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e chlSab2.chr7 134259755 142 + 135778131 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=164688.000000 s hg38.chr4_KI270789v1_alt 55535 98 + 205944 cgccactgcactccagcctgggtgacagagcgagattttgtctt-----aaaaaaaaatatatatatatatatatacacacacacacacacacacacacacat s panTro5.chr4 192846694 103 + 194502333 caccactgcactccagcctgggtgacagagcgagattttgtctttaaaaaaaaaaaaaaatatatatatatatatacacacacacacacacacacacacacac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192730948 100 + 195804263 cgccactgcactccagcctgggtgacagagcgagattttgtcttta---aaaaaaaataaaaTATATATATATacacacacacacacacacacacacacacac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767480 103 + 4876863 cgccactgcactccagcctgggtgacagagcgagattttgtcttaaaaaaaaaaaaaatatatatatatatatacacacacacacacacacacacacacacac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112652976 57 + 115148730 tgccactgcattccagcctgggtaacagagtaagattctgtctt-----aaa-----------aTATATATAT------------------------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188935960 79 + 190429646 tgccactgcactccagcctgggtgacagagcaagactctgtctttaaaaaaaaaaaaaaaaatatatatatatatatat------------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883421 79 + 189454096 tgccactgcactccagcctgggtgacagagcaagactctgtctttaaaaaaaaaaaaaaaaatatatatatatatatat------------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261174 68 - 25927173 tgccactgcactccagcctgggtgacagagcaagactctgtctttaaaaaaaaaaaaaaa-----------atatatat------------------------ i macNem1.NW_012013133v1 C 0 C 0 s manLeu1.NW_012102221v1 2693226 66 - 2847728 tgccactgcactccagcctgggtgacagagcaagactctgtctttaaaaaaaa-------------tatatatatatat------------------------ i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e chlSab2.chr7 134259755 142 + 135778131 I e cerAty1.NW_012001672v1 3300813 96 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=20630.000000 s hg38.chr4_KI270789v1_alt 55633 9 + 205944 atatatata s panTro5.chr4 192846797 9 + 194502333 aTATATATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731048 9 + 195804263 acaTATATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767583 9 + 4876863 acaTATATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653033 7 + 115148730 --AGAGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936039 9 + 190429646 atatatata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883500 9 + 189454096 atatatata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261242 9 - 25927173 atatatata i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134259897 9 + 135778131 ataataata i chlSab2.chr7 I 142 C 0 s manLeu1.NW_012102221v1 2693292 9 - 2847728 atatataaa i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189572622 0 - 190850796 C e cebCap1.NW_016107886v1 946577 0 - 2196201 C e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e dasNov3.JH570353 1390752 532 - 2520184 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e aotNan1.NW_018492112v1 3342328 0 - 5030052 C e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e cerAty1.NW_012001672v1 3300813 96 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=4657.000000 s hg38.chr4_KI270789v1_alt 55642 2 + 205944 GA s panTro5.chr4 192846806 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731057 2 + 195804263 GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767592 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653040 2 + 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936048 2 + 190429646 ta i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187883509 2 + 189454096 AA i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24261251 2 - 25927173 aa i macNem1.NW_012013133v1 C 0 I 1 s chlSab2.chr7 134259906 2 + 135778131 at i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693301 2 - 2847728 at i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572622 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 946577 2 - 2196201 GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342328 2 - 5030052 GA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1391284 2 - 2520184 GA i dasNov3.JH570353 I 532 C 0 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e cerAty1.NW_012001672v1 3300813 96 + 4669795 I e otoGar3.GL873580 11190552 397 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 55644 1 + 205944 A s panTro5.chr4 192846808 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731059 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767594 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653042 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936051 1 + 190429646 a i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187883512 1 + 189454096 A i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24261254 1 - 25927173 a i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3300909 1 + 4669795 A i cerAty1.NW_012001672v1 I 96 C 0 s chlSab2.chr7 134259908 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693303 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572624 1 - 190850796 A i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 946579 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342330 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1391286 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e saiBol1.JH378165 13057572 0 - 14256875 C e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11190552 397 - 11315646 I a score=475422.000000 s hg38.chr4_KI270789v1_alt 55645 54 + 205944 CACCTTTAAG--ATGATTTGTGTCTTAC-TTCTTTTTACTTATCCCATGATTGTCAC-- s panTro5.chr4 192846809 54 + 194502333 CACCTTTAAG--ATGATTTGTGTCTTAC-TTCTTTTTACTTATCCCATGATTGTCAC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731060 54 + 195804263 CACCTTTAAG--ATGATTTGTGTCTTAC-TTCTTTTTACTTATCCCATGATTGTCAC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767595 54 + 4876863 CATCTTTAAG--ATGATTTGTGTCTTAC-TTCTTTTTACTTATCCCATGATTGTCAC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653043 54 + 115148730 CATCTGTAAG--ATGATTTATGTCTTAC-TCCTTTTTACTTACCCCACGATTGTCAC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936052 54 + 190429646 CATCGTTAAG--ATAATTTCTGTCTTAT-TCCTTTTTACTTATCCTGCATTTGTCAC-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883513 54 + 189454096 CATCGTTAAG--ATAATTTCTGTCTTAC-TCCTTTTTACTTATCCTGCAGTTGTCAC-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261255 54 - 25927173 catCTTTAAG--ATAATTTCTGTCTTAC-TCCTTTTTACTTATCCTGCAGTTGTCAC-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300910 54 + 4669795 CATCTTTAAG--ATAATTTCTGTCTTAC-TCCTTTTTACTTATCCTGCAGTTGCCAC-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259909 54 + 135778131 CATCTTTAAG--ATAATTTCTGTCTTAC-TCCTTTTTACTTATCCTGCAGTTGTCAC-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693304 54 - 2847728 catCTTTAAG--ATAATTTCTGTCTTAC-TCCTTTTTACTTATCCTGCAGTTGCCAC-- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572625 55 - 190850796 CATCTTTAAG--ATGAGTCATGTCTTACTTCCTTTTTACTTATCCTGCAATTGTCAC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057572 54 - 14256875 CATCTTTAAG--GTGAGTTGTGTCTTAC-TCCTTTTTACTTATCTTGCAATTGTCAC-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946580 54 - 2196201 CATCTTTAAG--GTGAGTTGTGTCTTAC-TCCTATTTACTTATCCTGCAATTGTCAC-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342331 54 - 5030052 CATCTTTAAG--ATGAGTTGTGTCTTAC-TCCTTTTTACTTATCCTGCAATTGTCAC-- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11190949 56 - 11315646 caccttcaaagtgtgagttgtgtcttat-gcctttgtgtTTATGCTCCAATTGTCAC-- i otoGar3.GL873580 I 397 I 3 s dasNov3.JH570353 1391287 54 - 2520184 CACCTTCAAAGTATGACCTGTGTTTTAT-TC----TTATTTATACCATAATGGCTGTTC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3894391 405 + 3993831 I e micMur3.chr14 17473385 844 - 93316391 I e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=56327.000000 s hg38.chr4_KI270789v1_alt 55699 4 + 205944 AATA s panTro5.chr4 192846863 4 + 194502333 AATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731114 4 + 195804263 AATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767649 4 + 4876863 AATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653097 4 + 115148730 AATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936106 4 + 190429646 AATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883567 4 + 189454096 AATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261309 4 - 25927173 AATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300964 4 + 4669795 AATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259963 4 + 135778131 AATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693358 4 - 2847728 AATA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572680 4 - 190850796 AATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057626 4 - 14256875 AATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946634 4 - 2196201 AATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342385 4 - 5030052 AATA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474229 4 - 93316391 AATA i micMur3.chr14 I 844 C 0 s proCoq1.NW_012145301v1 3894796 4 + 3993831 AATA i proCoq1.NW_012145301v1 I 405 C 0 s otoGar3.GL873580 11191008 4 - 11315646 AATA i otoGar3.GL873580 I 3 C 0 s dasNov3.JH570353 1391341 4 - 2520184 AATG i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16883804 423 - 59632846 I e mm10.chr8 86520084 664 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=87312.000000 s hg38.chr4_KI270789v1_alt 55703 12 + 205944 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA s panTro5.chr4 192846867 12 + 194502333 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731118 12 + 195804263 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767653 12 + 4876863 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653101 105 + 115148730 ATAAGCAAAAAAACCCACTGTTGACATAAGTTAATACTTTTATTTTGCCACTATTGCTTTCTTGAGCCCTTTTATTCAGTCACAGCCACTTGTGTACATTAGGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936110 12 + 190429646 A--------------------------AGGT----------------------TTACT---------------------------------------------CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883571 12 + 189454096 A--------------------------AGGT----------------------TTACT---------------------------------------------CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261313 12 - 25927173 A--------------------------AGGT----------------------TTACT---------------------------------------------CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300968 12 + 4669795 C--------------------------AGGT----------------------TTACT---------------------------------------------CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259967 12 + 135778131 A--------------------------AGGT----------------------TTACT---------------------------------------------CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693362 12 - 2847728 A--------------------------AGGT----------------------TTACT---------------------------------------------CA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572684 12 - 190850796 A--------------------------AGAT----------------------TTGCT---------------------------------------------CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13057630 12 - 14256875 A--------------------------AGAT----------------------TTGCT---------------------------------------------CA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 946638 12 - 2196201 A--------------------------AGAT----------------------TTGCT---------------------------------------------CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342389 12 - 5030052 A--------------------------AGAT----------------------TAGCT---------------------------------------------CA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474233 12 - 93316391 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3894800 12 + 3993831 A--------------------------AGGT----------------------TTGCT---------------------------------------------CA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191012 12 - 11315646 A--------------------------TGGT----------------------TTGCT---------------------------------------------CA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86520748 12 - 129401213 A--------------------------AAAT----------------------TTGTT---------------------------------------------TA i mm10.chr8 I 664 C 0 s dasNov3.JH570353 1391345 12 - 2520184 A--------------------------AGGT----------------------TTGCA---------------------------------------------AA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16883804 423 - 59632846 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=1488008.000000 s hg38.chr4_KI270789v1_alt 55715 131 + 205944 CATCATAAGCAAATACCTAAA--TAGACAT--GCC---TGATTTT---------------------------CTTACAATT-ATGGAAGTGAATCTTACTTTGAAAAAAAATCATAAATGCCCCACA--TTTTTCAATGTGCTTTTGGACATTTCTTAATAACTATGT s panTro5.chr4 192846879 131 + 194502333 CATCATAAGCAAATACCTAAA--CAGACAT--GTC---TGATTTT---------------------------CTTACAATT-ATGGAAGTGAATCTTACTTTGAAAAAAAATCATAAATGCCCCACA--TTTTTCAATGTGCTTTTGGACATTTCTTAATCACTATGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731130 130 + 195804263 CATCATAAGCAAATACCTAAA--CAGACAT--GTC---TGATTTT---------------------------CTTACAATT-ATGGAAGTGAATCTTACTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTGCTTTTGGACATTTCTTAATCACTATGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767665 131 + 4876863 CATCATAAGCAAATACCTAAA--CAGACAT--GTC---TGATTTT---------------------------CTTACAATT-ATGGTAGTGAATCTTACTTTGAAAAAAAACCATAAATGCGCCACA--TTTTTCAATGTGCTTTTGGACATTTCTTAATAACTATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653206 128 + 115148730 CACAATAAGCAAATACCT--A--CAGACAT--GTC---TGATTTT---------------------------CTTACAATT-ATGAAAGTGAATCTTACTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTGCTTTTGGACATTTCTTAATAACTATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936122 157 + 190429646 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATtttcttacaatttcttacaatttctGATTTCTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAACTATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883583 157 + 189454096 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATtttcttacaatttcttacaatttctGATTTCTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAACTATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261325 157 - 25927173 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATtttcttacaatttcttacaatttctGATTTCTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAACTATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3300980 144 + 4669795 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATTTTCTTACAATTTCTGA-------------TTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAACTATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134259979 154 + 135778131 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATtttcttacaatttcttacaatttctGATTTCTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAACTA---TGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693374 142 - 2847728 CATAATAAGCAAATACCTAAA--TAGACAT--GTC---TGATTTTCTTACAATTTCTGA-------------TTTACAATT-ATGAAAGTGAATCTTTCTTTG-AAAAAAATCATAAATGCCCCACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAAC--TGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189572696 120 - 190850796 CGTAATAAGTGAATACCTAAA--TAGACAT--GTC---TGATTTT---------------------------CTTGCAATT-ATGAAAG------TTACTTTGTAAAAAA-----AAATGCCCAATA--TTTTTCAATGTACTTTTGGACATTTCTTAATAAGTATGT i calJac3.chr3 C 0 I 557 s saiBol1.JH378165 13057642 125 - 14256875 CATAATAAGTGAATACCTAAA--TAGGCAT--GTC---TGATTTT---------------------------CTTGCAATT-ATGAAAG------TTACTTTGAAAAAAAATAACAAATGCCCAACA--TTTTTCAGTGTACTTTTGGACATTTCTTAATAACTATGt i saiBol1.JH378165 C 0 I 547 s cebCap1.NW_016107886v1 946650 125 - 2196201 CAAAAGAAGTGAATAGCTAAG--TAGACAT--GTC---TGATTTT---------------------------CTTGCAATT-ATGAAAG------TTACTTTGAAAAAAAGTAACAAATGCCCAACA--TTTTTCAGTGTACTTTTGGACATTGCTTAATAACTATGt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3342401 121 - 5030052 TGTAATAAGTGAATACCTAAA--TAGACAT--GTC---TGATTTT---------------------------CTTGCAGTT-ATGAAAG------TTACTTTGAAAAAAAAT----AATGCCCAACA--TTTTTCAATGTACTTTTGGACATTTCTTAATAACTATGt i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474245 131 - 93316391 CCTAATAAGCAAATACATAAA--TAGACACAAATC---TGATTTT---------------------------CTTGCAGCT--AAGAAGTTAATTTTGCTCTG-GAAAAAATAATACATGCCTCACA--TTTTTCAATGTACCCTTGGAAATTTCTTAATAGCTACGT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3894812 132 + 3993831 CCTAATAAGAAAATACATAAA--TAGACACAAATC---TGGTTTT---------------------------CTTGCAATT-AAAAAAGTTAATCTTGCTTTG-GAAAAAATAATACATGCCTCACA--TTTTTCAATGTACCTTTGGAAATTTCTTAATAGCTATTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191024 128 - 11315646 CCTAATAAGCAAATACATAAA--TAGACACAAATC---TGGTTCC---------------------------CTTACAATT-AAGGAAGTTAATCTTACTCTG-GAAAAAATAACAATTACCTCATA--TTTTTCAGTGTGCCCTTGGAAATTCT----TAACTATAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86520760 113 - 129401213 CATGATAAGCAAAT------------------GTA---TAATTTC---------------------------CTTGGATTT-ATGAAAGTAAATCTTGCTTCAGAAAAATGCCATAAGTGGCCCATA--ATTTTGGA--TACTTTTGGAAACGTCATTATAACTAG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16884227 135 - 59632846 tatAATAAGCAAATACATAAA--TGGACGC--AACCCTTGATTCC---------------------------CTTGCAATT-AAGAAGGTTAACCTTGCTCTG-GCAAAAATAATAAATGCCTCACATTTTTTTCAGAGTACTTGTGGAAATTTTTAAATAACTTTGT i canFam3.chr16 I 423 I 3 s dasNov3.JH570353 1391357 128 - 2520184 AATAATAAACAAATACCTAAAGCTACATAC--CTC---TAATTCC---------------------------CTTGTAATTTAAGAACATTAATCTTGTTTTG-GTAAATATAATAAGGGCTCCATA--TTCTTAAATATACTTTTGGAAAT-----AACGGGTATGT i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=49552.000000 s hg38.chr4_KI270789v1_alt 55846 3 + 205944 TTT s panTro5.chr4 192847010 3 + 194502333 TTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731260 3 + 195804263 TTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767796 3 + 4876863 TTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653334 3 + 115148730 TTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936279 3 + 190429646 TTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883740 3 + 189454096 TTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261482 3 - 25927173 TTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301124 3 + 4669795 TTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260133 3 + 135778131 TTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693516 3 - 2847728 TTT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573373 3 - 190850796 TTT i calJac3.chr3 I 557 C 0 s saiBol1.JH378165 13058314 3 - 14256875 TTT i saiBol1.JH378165 I 547 C 0 s cebCap1.NW_016107886v1 946775 3 - 2196201 ttt i cebCap1.NW_016107886v1 C 0 I 535 s aotNan1.NW_018492112v1 3342522 3 - 5030052 ttt i aotNan1.NW_018492112v1 C 0 I 555 s micMur3.chr14 17474376 3 - 93316391 TTT i micMur3.chr14 C 0 I 138 s proCoq1.NW_012145301v1 3894944 3 + 3993831 TTT i proCoq1.NW_012145301v1 C 0 I 6 s otoGar3.GL873580 11191152 3 - 11315646 TTC i otoGar3.GL873580 C 0 I 6 s mm10.chr8 86520873 3 - 129401213 ttt i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1391485 3 - 2520184 TTT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16884362 3 - 59632846 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=56732.000000 s hg38.chr4_KI270789v1_alt 55849 5 + 205944 TATAA s panTro5.chr4 192847013 5 + 194502333 TATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731263 5 + 195804263 TATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767799 5 + 4876863 TATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653337 5 + 115148730 TATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936282 5 + 190429646 TATAA i rheMac8.chr5 C 0 I 14 s macFas5.chr5 187883743 5 + 189454096 TATAA i macFas5.chr5 C 0 I 14 s macNem1.NW_012013133v1 24261485 5 - 25927173 TATAA i macNem1.NW_012013133v1 C 0 I 14 s cerAty1.NW_012001672v1 3301127 5 + 4669795 TATAA i cerAty1.NW_012001672v1 C 0 I 14 s chlSab2.chr7 134260136 5 + 135778131 TATAA i chlSab2.chr7 C 0 I 14 s manLeu1.NW_012102221v1 2693519 5 - 2847728 TATAA i manLeu1.NW_012102221v1 C 0 I 14 s calJac3.chr3 189573376 5 - 190850796 TATAA i calJac3.chr3 C 0 I 11 s saiBol1.JH378165 13058317 5 - 14256875 TATAA i saiBol1.JH378165 C 0 I 11 s proCoq1.NW_012145301v1 3894953 5 + 3993831 TATAA i proCoq1.NW_012145301v1 I 6 I 5 s otoGar3.GL873580 11191161 4 - 11315646 TATA- i otoGar3.GL873580 I 6 I 2 s mm10.chr8 86520876 5 - 129401213 tataa i mm10.chr8 C 0 I 8 s canFam3.chr16 16884365 5 - 59632846 TATAG i canFam3.chr16 I 3 I 5 s dasNov3.JH570353 1391488 5 - 2520184 CATAA i dasNov3.JH570353 C 0 I 8 e cebCap1.NW_016107886v1 946778 535 - 2196201 I e micMur3.chr14 17474379 138 - 93316391 I e aotNan1.NW_018492112v1 3342525 555 - 5030052 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=343396.000000 s hg38.chr4_KI270789v1_alt 55854 43 + 205944 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAT s panTro5.chr4 192847018 43 + 194502333 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731268 43 + 195804263 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767804 43 + 4876863 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653342 43 + 115148730 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936301 39 + 190429646 TA-TTA------TGTATGTTAAAGCACTTACAA-TTTTAATGTGTAG---- i rheMac8.chr5 I 14 C 0 s macFas5.chr5 187883762 39 + 189454096 TA-TTA------TGTATGTTAAAGCACTTACAA-TTTTAATGTGTAG---- i macFas5.chr5 I 14 C 0 s macNem1.NW_012013133v1 24261504 39 - 25927173 TA-TTA------TGTATGTTAAAGCACTTACAA-TTTTAATGTGTAG---- i macNem1.NW_012013133v1 I 14 C 0 s cerAty1.NW_012001672v1 3301146 39 + 4669795 TA-TTA------CATATGTTAAAGCACTTACAA-TTTTAATGTGTAA---- i cerAty1.NW_012001672v1 I 14 C 0 s chlSab2.chr7 134260155 39 + 135778131 TA-TTA------TGTGTGTTAAAGCACTTACAA-TTTTAATGTGTAC---- i chlSab2.chr7 I 14 C 0 s manLeu1.NW_012102221v1 2693538 39 - 2847728 TA-TTA------TGTATGTTAAAGCACTTACAA-TTTTAATGTGTAA---- i manLeu1.NW_012102221v1 I 14 C 0 s calJac3.chr3 189573392 43 - 190850796 TA-TTA------TGTATGTTAAGGCACTTACAA-TTTTAATGTGTATTTAC i calJac3.chr3 I 11 C 0 s saiBol1.JH378165 13058333 43 - 14256875 TA-TTA------TATATGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAC i saiBol1.JH378165 I 11 C 0 s cebCap1.NW_016107886v1 947313 43 - 2196201 ta-tta------tatatGTTAAGGCACTTACAA-TTTTAATGTGTAGTTAC i cebCap1.NW_016107886v1 I 535 C 0 s proCoq1.NW_012145301v1 3894963 43 + 3993831 TATTAT------TATATATTAAGGAATTTATAA--TTTAACATATAGTTAC i proCoq1.NW_012145301v1 I 5 C 0 s otoGar3.GL873580 11191167 42 - 11315646 TA-TAA------TACACATTCAAGAATTTACGA--TGTAACATGTAGTTAC i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86520889 26 - 129401213 ca-tta------tgtattttaaca-----------ttaaataga------- i mm10.chr8 I 8 C 0 s canFam3.chr16 16884375 44 - 59632846 TA-ATA------TATACACTAAGGAATTTACACCTTTTAATATATCGTTAC i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1391501 50 - 2520184 CA-TTATTTTCCTGCACATTAAAAATCTTATGATTTTTAAGGTGTAATTAC i dasNov3.JH570353 I 8 C 0 e micMur3.chr14 17474379 138 - 93316391 I e aotNan1.NW_018492112v1 3342525 555 - 5030052 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=547155.000000 s hg38.chr4_KI270789v1_alt 55897 73 + 205944 ATGTAAAATCAC----ATTGTATCGAGTAAGC---ATTATCAAATAATTCTTTA-TGATGAAATT-AATTTATGAG---TTTCTA s panTro5.chr4 192847061 73 + 194502333 ATGTAAAATCAT----ATTTTATCAAGTAAGC---ATTATCAAATAATTCTTTA-TGATGAAATT-AATTTATGAG---TTTCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731311 73 + 195804263 ATGTAAAATCAC----ATTTTATCAAGTAAGC---ATTATCAAATAATTCTTTA-TGATGAAATT-AATTTATGAG---TTTCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767847 73 + 4876863 ATGTAAAATCAC----ATTTTATCAAGTAAGC---GTTATCAAATAACTCTTTA-TGATGAAATT-AATTTATGAG---TTTCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653385 73 + 115148730 ATGTAAAATCAC----ATTTTATGAAATAAGC---ATTATCAAATAATTCTTCA-TGATGAAATT-GATTTATGAG---TTTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936340 63 + 190429646 ACATAAAATCAC----ATCTTATCAA---------ACTATCAAATAATTTTTTA-AGATAAA-----ATTTATGAG---TTTCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883801 63 + 189454096 ACATAAAATCAC----ATCTTATCAA---------ACTATCAAATAATTTTTTA-AGATAAA-----ATTTATGAG---TTTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261543 63 - 25927173 ACATAAAATCAC----ATCTTATCAA---------ACTATCAAATAATTTTTTA-AGATAAA-----ATTTATGAG---TTTCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301185 63 + 4669795 ACGTAAAATCAC----ATCTTATCAA---------ACTATCAAATAATTTTTTA-AGATAAA-----ATTTATGAG---TTTCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260194 58 + 135778131 ACGTAAAATCAC---------ATCAA---------ACTATCAAATAATTTTTTA-TGATAAA-----ATTTATGAG---TTTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693577 63 - 2847728 ACGTAAAATCAC----ATCTTATCAA---------ACTATCAAATAATTTTTTA-AGATAAA-----ATTTATGAG---TTTCTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573435 75 - 190850796 ATGTAAAATCAC----ATTTTATCAAATAAGCATTATTATCAGATAATTATTCA-AGATAAAATA-AATTTATGA----CTTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058376 75 - 14256875 ATGTAAAATCAC----ATTTTATCAAATAGGCATTATTATCAAATAATTATTTG-AGATAAAATT-AATGTATGA----TTTCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947356 75 - 2196201 ATGTAAAATCAC----ATTTTATCAAATAAGCATTATTATCAAATAATTACTCA-AGATAAAATT-AATTTGTGA----TTTCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343080 75 - 5030052 ATGTAAAATCAC----ATTTTATCGAATAAGCATTATTATCAAATAATTATTCA-AGATAAAATT-AATTTATGA----TTTCTA i aotNan1.NW_018492112v1 I 555 C 0 s proCoq1.NW_012145301v1 3895006 81 + 3993831 ATATAATATCACTGATATTTTATCAAAGAAGCATTATTGTCAAATAAGTCTTTA-AGAAAAAATTAAATTTACGAG---TCCCTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191209 79 - 11315646 CTA-AAAATCATACCTATTTTAACAAATAAGCATTATTTTCAAATAAATATTTAGGGAAAAAATTAAATTCTTGAG---TCCC-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86520915 74 - 129401213 atatta-attGT----GCTTTATTAAATAAGCATTATGTTAAAATAATTCTTTA-AGACAAA-TT-AACTTTCGAGATATTT--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16884419 74 - 59632846 ATATAAAATCAC--ATATTTTATGAAATGACCATTATTTTCAAATAAGTCTTTA-AGAGATA-----ATTTTTAAA---TATCTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1391551 80 - 2520184 ATGCAGAATCTTTTTTATTTCTTCAAAAGAACATTATTTTCCAGGAATTCATTA-GGAGCAAATT-AATTTTTGAA---TCACCA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17474379 138 - 93316391 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=1745982.000000 s hg38.chr4_KI270789v1_alt 55970 149 + 205944 ATAAATACTACAGTATTGTTGGCCAGAAAGCACTAA-TGAAAATAAATT-AAAGGTATTGTTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCATAATTTAAGAACACAGCCACTTCAAATTGTAAAAA s panTro5.chr4 192847134 149 + 194502333 ATAAATACTACAGTATTGTTGGCCAGAAAGCACTAA-TGAAAATAAATT-AAAGGTATTGTTTGTTAC------------------------TTTAAAGA-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCATAATTTAAGAACACAGCCACTTCAAATTGTAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731384 149 + 195804263 ATAAATACTACAGTATTGTTGGCCAGAAAGCACTAA-TGAAAATAAATT-AAAGGTATTGTTTGTTAC------------------------TTTAAAGA-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCATAATTTAAGAACACAGCCACTTCAAATTGTAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3767920 149 + 4876863 ATAAATACTACAGTATTGTTGGCCAGAAAGCACTAA-TGAAAATAAATT-AAACGTATTGTTTGTTAC------------------------TTTAAAGA-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCATAATTTAAGAACACAGCCACTTCAAATTGTAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653458 149 + 115148730 ATAAATATTACAGTGTTGTTGGCCAGAAAGCACTAA-TGAAAATAAATT-AAAGGTATTGTTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCATAATTTAAGAACACATCCACTTCAAATTGTAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936403 144 + 190429646 ACAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AATGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATACAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187883864 144 + 189454096 ACAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AATGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261606 144 - 25927173 ACAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AATGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301248 144 + 4669795 ATAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AACGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260252 144 + 135778131 ATAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AACGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGCATTTCTAATATAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693640 144 - 2847728 ATAAATATTACAGTATTGCTGCCCAGAAAGCACTAA-TAAAAATAAATT-AACGGTATCATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAATATAAAGAAATGTAAGGAATAGTTCA-----TAAGAACACATCCACTTCAAATTGTAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573510 142 - 190850796 ATAAATATTATAGTAGTCTTGGCCAGAAAGCACTAA-TAAAAATAAATT-AAAAGTAGTATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAAGATAAAGAAATGTAAGGAATAGCT-------TAAGAACACATCTACTTCAAACTGTAGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058451 139 - 14256875 ATAAATATTATAGTAGTCTTGGCCAGAAAGCACTAA-TAAA---AAACT-AAAAGTAGAATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAAGATAAAGAAATGTAAGGAATAACT-------TAAGAGCACATCCACTTCAAACTGTAAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947431 166 - 2196201 ATAAATATTATAATGGTCATGGCCTGAAAGCACTAA-TAAAAATAAATT-GAAAGTAGTATACGGTACTTTGTATTTTTAAAGGCTATATAATTTAAAGG-CTAGGAATTTCTAAGATAAAGAAATGTAAGGAATAACT-------TAAGAACACATCCACTTCAAACTGTAAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343155 141 - 5030052 ATAAATATTATAGTAGTCTTGGCCAGAAAGCACTAA-TAAAAATAAATT-AAAAGTAGTATTTGTTAC------------------------TTTAAAGG-CTAGGAATTTCTAAGA-AAAGAAATGTAAAGAATAACT-------TAAGAACACATCCACTTCAAACTGTAAAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474517 149 - 93316391 ATAAATATTACAGTGTTCCTGGGCAGAAAGCATTAA-TGAAAATAAGTTTAAAGGTATTATTTGTTAC------------------------TTTAAAAGATTATGAGTTTCTAATATAAGGAAATGTAAGGAATAGTTCATAACTTAAGA--ACATCCACTTCAAATTGCAAAAA i micMur3.chr14 I 138 C 0 s proCoq1.NW_012145301v1 3895087 146 + 3993831 ATAAATATTACAGTGTTCTTAGACAGAAAGCATTAA-TGAAAATAAGTTTAAAGG---TATTTGTTAC------------------------TTTAAAAGACCATGAGTTTCTAATATAAGGACATGTAAGGAGTAGTTCATAACTTAAGA--ACATCCACTTCAAATTGTAAAAA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191288 110 - 11315646 -TAAATACTACCCTGTTGTTGGGCAGAAAGCACTGA-TGCCAATAAGTTCAAAGG-----------GT------------------------ATTAAAGTAACA---------------------------AAGTAGCTCATCACTTAAGA--ATATCCACTTCAAATTGTAAAAA i otoGar3.GL873580 C 0 I 6 s mm10.chr8 86520989 145 - 129401213 AAAAATACTA--GTATCATTGGTCAGAAGTCAAGAAGTGAAGGCAAGTT-TAGAATAGGATTTGTTCC------------------------TTTAAAT--CTAGGAATTTCTAATATAGAGCAATCTGAGCAGTACATCATAACCAAAGA--ACAGCATTTTCAAAATATGGAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16884493 143 - 59632846 GTAAATATTACAGTGTCATTGAGCTGAAATCACTGA-TGAAATGAAGTTCAAAGGTATTACCTGCTAC------------------------TATAAAGA-CTAAGAA-----GATGTAATAAAATGTAAAAAGTAGCTCATAATTTAAGA--GTATCCACTTCAAATTGTAGGTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1391631 148 - 2520184 ATATACATTACAGTGTCCCTAGGAATAAATCATTAA-TGAAATTAAGTTTAAAGACATTATTTACTAC------------------------TTTAAAGA-TCAGGAAATTCTAATATAATGAAATGGAAGGAGTAGCTCATAACTTCAGG--GTATCTACTTCAAACTGTAAAAA i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 818497 2079 + 2368649 M a score=17778.000000 s hg38.chr4_KI270789v1_alt 56119 2 + 205944 AG s panTro5.chr4 192847283 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731533 2 + 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768069 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653607 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936547 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884008 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261750 2 - 25927173 AG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301392 2 + 4669795 AG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260396 2 + 135778131 CG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693784 2 - 2847728 AG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573652 2 - 190850796 AC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058590 2 - 14256875 AC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947597 2 - 2196201 AT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343296 2 - 5030052 AC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474666 2 - 93316391 AG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3895233 2 + 3993831 AG i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86521134 2 - 129401213 AG i mm10.chr8 C 0 C 0 s canFam3.chr16 16884636 2 - 59632846 AG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1391779 2 - 2520184 AG i dasNov3.JH570353 C 0 I 5 e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=51981.000000 s hg38.chr4_KI270789v1_alt 56121 5 + 205944 ----------AATTA s panTro5.chr4 192847285 5 + 194502333 ----------AATTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731535 5 + 195804263 ----------AATTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768071 5 + 4876863 ----------AATTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653609 5 + 115148730 ----------AATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936549 5 + 190429646 ----------AGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884010 5 + 189454096 ----------AGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261752 5 - 25927173 ----------AGTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301394 5 + 4669795 ----------AGTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260398 5 + 135778131 ----------AGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693786 5 - 2847728 ----------AATTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573654 15 - 190850796 TGTAAAAAAGAGTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058592 15 - 14256875 TGTAAAAAAGAGTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947599 5 - 2196201 ----------AGTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343298 15 - 5030052 TGTAAAAAAGAGTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474668 5 - 93316391 ----------AGTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3895235 5 + 3993831 ----------AGTTA i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86521136 5 - 129401213 ----------ACCTA i mm10.chr8 C 0 I 4 s canFam3.chr16 16884638 5 - 59632846 ----------AGTTA i canFam3.chr16 C 0 I 2 e dasNov3.JH570353 1391781 5 - 2520184 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=51436.000000 s hg38.chr4_KI270789v1_alt 56126 5 + 205944 TCTAT s panTro5.chr4 192847290 5 + 194502333 TCTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731540 5 + 195804263 TCTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768076 5 + 4876863 TCTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653614 5 + 115148730 TCTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936554 5 + 190429646 TCTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884015 5 + 189454096 TCTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261757 5 - 25927173 TCTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301399 5 + 4669795 TCTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260403 5 + 135778131 TCTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693791 5 - 2847728 TCTAT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573669 5 - 190850796 ACTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058607 5 - 14256875 ACCAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947604 5 - 2196201 ACTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343313 5 - 5030052 ACTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474673 5 - 93316391 ACTAT i micMur3.chr14 C 0 I 49 s proCoq1.NW_012145301v1 3895240 5 + 3993831 ACTAT i proCoq1.NW_012145301v1 C 0 I 49 s canFam3.chr16 16884645 5 - 59632846 TCTAT i canFam3.chr16 I 2 C 0 e dasNov3.JH570353 1391781 5 - 2520184 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=36927.000000 s hg38.chr4_KI270789v1_alt 56131 8 + 205944 tgttaaag s panTro5.chr4 192847295 8 + 194502333 tgttaaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731545 8 + 195804263 tgttaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768081 8 + 4876863 tgttaaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653619 8 + 115148730 tgttaaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936559 8 + 190429646 tgttaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884020 8 + 189454096 tgttaaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261762 8 - 25927173 tgttaaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301404 8 + 4669795 tgttaaag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260408 8 + 135778131 tgttaaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693796 8 - 2847728 tgttaaag i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573674 4 - 190850796 TGTT---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13058612 4 - 14256875 TGTT---- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947609 4 - 2196201 TGTT---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343318 4 - 5030052 TGTT---- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16884650 8 - 59632846 TATCACAG i canFam3.chr16 C 0 I 18 e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=931779.000000 s hg38.chr4_KI270789v1_alt 56139 130 + 205944 cgaactaaatatggcctgggaaggactctata---cttctatacttgagtccttgtagaggaaccataacctaacttaataggacaacaagattgaaaacctaattta---------------------------ggagtatgtac---------------gtggaacaatcgcc s panTro5.chr4 192847303 130 + 194502333 cgaactaaatatggcctgggaaggactctata---cttctatacttgagtccttgtagaggaaccataacctaacttaataggtcaacaagattgaaaacctaattta---------------------------ggagtatgtac---------------gtggaacaatcgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731553 130 + 195804263 cgaactaaatatggcctgggaaggactctata---cttctatacttgagtccttgtagaggaaccataacctaacttaataggtcaacaagattgaaaacctaattta---------------------------ggagtatgtac---------------gtggaacaatcgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768089 130 + 4876863 cgaactaaatatggcctgggaaggactctata---cttctatacttgagtccttgtagaggaaccataacctaacttaatagttcaacaagattgaaaacctaattta---------------------------ggaggatgtac---------------gtggaacaatcgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653627 130 + 115148730 cgaactaaatatggcctgggaaggactctata---cttccatatttgagtccttgtagatgaaccatcacctaacttaataggtcaacaagattgaaaacctaattta---------------------------ggagtatgtac---------------gtggaacaatcacc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936567 144 + 190429646 cgaactaaatatggcctgggaaggactctata---cttccacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa-ttaattta---------------------------ggagtatgcacctgtaacaatcgctgatggaacaatcgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884028 144 + 189454096 cgaactaaatatggcctgggaaggactctata---cttccacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa-ttaattta---------------------------ggagtatgcacctgtaacaatcgctgatggaacaatcgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261770 144 - 25927173 cgaactaaatatggcctgggaaggactctata---cttccacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa-ttaattta---------------------------ggagtatgcacctgtaacaatcgctgatggaacaatcgcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301412 139 + 4669795 cgaactaaatatggcctgggaaggacactata---cttctacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa------ttg---------------------------ggagtatgcacctgtaacaatcgctgatggaacaatcgcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260416 144 + 135778131 tgaactaaatatggcctgggaaggactctata---cttctacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa-ttaattca---------------------------ggggtatgcacctgtaacaatcgctaatggaacaatcgcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693804 139 - 2847728 cgaactaaatatggcctgggaaggacactata---cttctacatttgagtccttgtagatgaaccataacctaacttaataggtcgacaaggttgaaaa-tt-----a---------------------------ggagtatgcacctgtaacaatcgctgatggaacaatcgcc i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573678 150 - 190850796 -------aatatggtctgggaaggactcgata---cttgtatatttaagtccttgtagatgaaccgtaacctaactcaccaggccgacaagatcgaagacctaactcagaggggtctgtaacggtggctgagcctggaggctgcac---------------ctaaaacggtggct i calJac3.chr3 C 0 I 11 s saiBol1.JH378165 13058616 123 - 14256875 -------aatgtggcctgggaaggactcgata---cttgtatatttaagtccttgtagatgaaccataacctaacctaacaggccaacaagattgaacacctaactta---------------------------ggagtctgcac---------------cagtgacagtcgct i saiBol1.JH378165 C 0 I 11 s cebCap1.NW_016107886v1 947613 123 - 2196201 -------aatatggcctgggaaggacttgata---cttgtatatgtcagtccttgtagatgaaccgtaacctaacttaacaggccggcaagattgaaaacctgactta---------------------------ggagtctgcac---------------ccataacagctgct i cebCap1.NW_016107886v1 C 0 I 20 s aotNan1.NW_018492112v1 3343322 126 - 5030052 -------aatatggtctgggaaggacttgatacttcttgtatatttaagtccttgtagatgaaccataacctaacttaataggccaacaagattgaaaacctaactta---------------------------ggagtctgcac---------------ctgtaacagtcgct i aotNan1.NW_018492112v1 C 0 I 11 e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=186186.000000 s hg38.chr4_KI270789v1_alt 56269 27 + 205944 agt----ccagcagccatacttcagccactc s panTro5.chr4 192847433 27 + 194502333 agt----ccagcagccatacttcagccactc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731683 27 + 195804263 agt----ccagcagccatacttcagccactc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768219 27 + 4876863 agt----ccagcagccatacttcagccactc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653757 27 + 115148730 aat----ccagcagccatacttcagccactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936711 31 + 190429646 aatccagccagcagccatacttcagccactc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884172 31 + 189454096 aatccagccagcagccatacttcagccactc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261914 31 - 25927173 aatccagccagcagccatacttcagccactc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301551 31 + 4669795 aatccagccagcagccatacttcagccactc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260560 31 + 135778131 aatgcagccagcagccatacttcagccactc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693943 31 - 2847728 aatccagccagcagccatacttcagccactc i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573839 27 - 190850796 agt----gcagcagccgcacttcagacactc i calJac3.chr3 I 11 C 0 s saiBol1.JH378165 13058750 27 - 14256875 agt----ccagcagccattcttcagacactc i saiBol1.JH378165 I 11 C 0 s aotNan1.NW_018492112v1 3343459 26 - 5030052 agt----ccagcagccatacttca-acactc i aotNan1.NW_018492112v1 I 11 C 0 e cebCap1.NW_016107886v1 947736 20 - 2196201 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=166487.000000 s hg38.chr4_KI270789v1_alt 56296 26 + 205944 acacactgc-tgcgtgttcaaactgtg s panTro5.chr4 192847460 26 + 194502333 acacactgc-tgagtgttcaaactgtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731710 26 + 195804263 acacactgc-tgagtgttcaaactgtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768246 26 + 4876863 acacactgc-tgagtgttcaaactgtg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653784 26 + 115148730 acacattgc-tgagtgttcaaactgtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936742 26 + 190429646 atacgttgcttgagtgttcaaactgt- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884203 26 + 189454096 atacgttgcttgagtgttcaaactgt- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261945 26 - 25927173 atacgttgcttgagtgttcaaactgt- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301582 26 + 4669795 atacattgcttgagtgttcaaactgt- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260591 26 + 135778131 atacattgcttgagtgttcaaactgt- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2693974 26 - 2847728 atacattgtttgagtgttcaaactgt- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189573866 26 - 190850796 acacgttgc-tgagtgttcagactgtg i calJac3.chr3 C 0 I 187 s saiBol1.JH378165 13058777 26 - 14256875 atgcaccgc-tgagggttcaaactgtg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947756 26 - 2196201 gcacaatgc-tgagtgttcaaactgtg i cebCap1.NW_016107886v1 I 20 C 0 s aotNan1.NW_018492112v1 3343485 26 - 5030052 atacattgc-tgagtgtgcaaactatg i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=118843.000000 s hg38.chr4_KI270789v1_alt 56322 17 + 205944 ttcgagtaaggcaaact s panTro5.chr4 192847486 17 + 194502333 ttcaagtaaggcaaact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731736 17 + 195804263 ttcaagtaaggcaaact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768272 17 + 4876863 ttcaagtaaggcaaact i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653810 17 + 115148730 ctcaagtaaggcaaact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936768 16 + 190429646 -tcaagtaaggcaaact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884229 16 + 189454096 -tcaagtaaggcaaact i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261971 16 - 25927173 -tcaagtaaggcaaact i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301608 16 + 4669795 -tcaagtaaggcaaact i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260617 16 + 135778131 -tcaagtaagacaaact i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694000 16 - 2847728 -tcaagtaaggcaaact i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13058803 17 - 14256875 ttccagcaaggcagacc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947782 17 - 2196201 tttcagcaaggcaaacc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343511 17 - 5030052 ttccagtaaggcaaact i aotNan1.NW_018492112v1 C 0 I 61 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=394710.000000 s hg38.chr4_KI270789v1_alt 56339 65 + 205944 tgtaaccagtccagttgtttgtgtaactcacttccgatttctgtacatctttttcc----tttttttgt s panTro5.chr4 192847503 65 + 194502333 tgtaaccaatccagttgtttgtgtaactcacttccgatttctgtacatctttttcc----tttttttgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731753 65 + 195804263 tgtaaccaatccagttgtttgtgtaactcacttccgatttctgtacatctttttcc----tttttttgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768289 65 + 4876863 tgtaaccaatccagttgtctgtgtaactcacttccgatttctgtacatctttttcc----tttttttgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653827 65 + 115148730 tgtaaccaatccggttgtttctgtaactcacctctgatttctgtacatccttttcc----attttttgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936784 68 + 190429646 tgtaaccaatccagttgtttctgtaactcacttccggtttctgtacatcatcttcc-ttttttttttgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884245 68 + 189454096 tgtaaccaatccagttgtttctgtaactcacttccggtttctgtacatcatcttcc-ttttttttttgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24261987 69 - 25927173 tgtaaccaatccagttgtttctgtaactcacttccggtttctgtacatcatcttcctttttttttttgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301624 68 + 4669795 tgtaaccaatccagttgtttctgtaactcacttccgatttctgtacatcatcttcc-ttttttttttgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260633 68 + 135778131 tgtaaccaatccagttgtttctgtaactcacttccggtttctgtacatcatcatct-ttttttttttgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694016 68 - 2847728 tgtaaccaatccagttgtttctgtaactcacttccgatttctgtacatcatcttcc-ttttttttttgt i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13058820 65 - 14256875 tgtagccaatccagctgtttctgtaactcacttctgatttctgtacatcatttccc----ttttttcgt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947799 65 - 2196201 tgtagcccgtccagctgtttctgtaactcacttctgatttccatgcatcatttccc----tttcttcgt i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e aotNan1.NW_018492112v1 3343528 61 - 5030052 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=888964.000000 s hg38.chr4_KI270789v1_alt 56404 134 + 205944 ctacaaattttcttccacgatgtggctgtgctggagtctctctgaatctgctgcgattctgggagctgattcacgcatcattcattgctcaagtaaactcctttaaatttaattcagctggccgggtg-cggtgg s panTro5.chr4 192847568 134 + 194502333 ctacaaattttcttccaccatgtggctgtgctggagtctctctgaatctgctgcgattctgggagctgattcacgaatcattcattgctgaagtaaagtcctttaaatttaattcagctggccgggtg-cagtgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731818 134 + 195804263 ctacaaattttcttccaccatgtggctgtgctggagtctctctgaatctgctgcgattctgggagctgattcacgaatcattcattgctgaagtaaagtcctttaaatttaattcagctggccgggtg-cagtgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768354 134 + 4876863 ctacaaattttcttccaccatgtggctgtgctggagtctctctgaatctgctgcgattctgggagctgattcacgaatcattcattgctcaagtaaactcctttaaatttaattcagctggccgggtg-cggtgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112653892 134 + 115148730 ctataaatcttcttccaccatgtggctgtgctggagtctctctgaatctgctgtgattctgggggctgattcacgaatcattcattgctcaattaaactcctttaaatttaattcagctggccgggtg-cagtgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936852 132 + 190429646 ctatgaatcttcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattccgggggctgatccacgaatcattaattgctcaattaaactcctttaaatttaattcagttggctgggtg-cggtgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884313 132 + 189454096 ctatgaatcttcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattccgggggctgatccacgaatcattaattgctcaattaaactcctttaaatttaattcagttggctgggtg-cggtgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262056 132 - 25927173 ctatgaatcttcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattccgggggctgatccacgaatcattaattgctcaattaaactcctttaaatttaattcagttggctgggtg-cggtgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301692 128 + 4669795 ctatgaatcttcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattctgggggctgatccacgaatcattaattgctc----aaactcctttaaatttaattcagttggctgggtg-cggtgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260701 129 + 135778131 ctatgaa---tcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattctgggggctgattcatgaatcattaattgctcaattaaactcctttaaatttaattcagttggctgggtg-cggtgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694084 128 - 2847728 ctatgaatcttcttccaccatgtggctgtgctg--gtctctctgaatctgctccgattctgggggctgatccatgaatcattaattgctc----aaactcctttaaatttaattcagttggctgggtg-cggtgg i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13058885 131 - 14256875 ctataagtcttcttccatcatgtggctgtgtag-tctctctctgaatccgttgtgattctggg-gctgattcac-aatcctttattgctcaattaaactcctttaaatttaattcagctggcagggcc-tgatgg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947864 132 - 2196201 ctataagtcttcttccaccatgtgtctgtgcag-actctctctgaatctgttgtgattctggg-gctgattcacaaatcctttattgctcaattaaactcctttaaatttaattcagctggcagggcc-cggtgg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343589 133 - 5030052 ctataagtcttcttccaccatgtggctgtgcag-actctctgtgaatctgttgtgattctggg-gctgattcacaaatcctttattgctcaattaaactcctttaaatttaattcagccgGCAGGGCCTTggtgg i aotNan1.NW_018492112v1 I 61 I 38 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=111572.000000 s hg38.chr4_KI270789v1_alt 56538 18 + 205944 ctcacgcctgtaatccca s panTro5.chr4 192847702 18 + 194502333 ctcacgcctgtaatccca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731952 18 + 195804263 ctcacgcctgtaatccca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768488 18 + 4876863 ctcacccctgtaatccaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654026 18 + 115148730 ctcatgcctgtaatccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188936984 18 + 190429646 ctcacgcctgtaatctca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884445 18 + 189454096 ctcacgcctgtaatctca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262188 18 - 25927173 ctcacgcctgtaatctca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301820 18 + 4669795 ctcacgcctgtaatctca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260830 18 + 135778131 ctcacgcctgaaatctca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694212 18 - 2847728 ctcacgcctgtaatctca i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13059016 18 - 14256875 ctcatgtctataatccca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 947996 18 - 2196201 ctcatgtctataatccca i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e aotNan1.NW_018492112v1 3343722 38 - 5030052 I e colAng1.NW_012116221v1 818497 2079 + 2368649 M e otoGar3.GL873580 11191398 6 - 11315646 I a score=186344.000000 s hg38.chr4_KI270789v1_alt 56556 23 + 205944 gcactttgggagtctgaggaggg s panTro5.chr4 192847720 23 + 194502333 gcactttgggagtctgaggaggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731970 23 + 195804263 gcactttgggagtctgaggaggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768506 23 + 4876863 gcactttgggagtctgaggaggg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654044 23 + 115148730 gcactttgggagtctgaggaggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937002 23 + 190429646 gcactttgggagtctgaggagag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884463 23 + 189454096 gcactttgggagtctgaggagag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262206 23 - 25927173 gcactttgggagtctgaggagag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301838 23 + 4669795 gcactttgggagtctgaggagag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260848 23 + 135778131 gcactttgggagtctgaggagag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694230 23 - 2847728 gcactttgggagtctgaggagag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820576 23 + 2368649 gcactttgggagtctgaggaggg i colAng1.NW_012116221v1 M 2079 C 0 s saiBol1.JH378165 13059034 23 - 14256875 gcactttgggaggctgaggaggg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948014 23 - 2196201 gcactttgggaggccgaggcggg i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e aotNan1.NW_018492112v1 3343722 38 - 5030052 I e otoGar3.GL873580 11191398 6 - 11315646 I a score=610840.000000 s hg38.chr4_KI270789v1_alt 56579 78 + 205944 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacat-g-----gtgaaac-tccatctctactaaaaatacaaaaat s panTro5.chr4 192847743 78 + 194502333 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacat-g-----atgaaac-tccatctctactaaaaatacaaaaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192731993 78 + 195804263 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacat-g-----atgaaac-tccatctctactaaaaatacaaaaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768529 78 + 4876863 cagatctcctgaggtcaggagttc-gagaccagcctga-ccaacat-g-----atgaaac-tccatctctactaaaaatacaaaaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654067 78 + 115148730 cagatcacccgaggtcaggagttc-gagaccagcctga-ccaatgt-g-----gtgaaac-tccgtctctactaaaaatacaaaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937025 78 + 190429646 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacatgg-----gtgaaac-cccgtctctactaaaaatac-aaaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884486 78 + 189454096 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacatgg-----gtgaaac-cccgtctctactaaaaatac-aaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262229 78 - 25927173 cagatcacctgaggtcaggagttc-aagaccagcctga-ccaacatgg-----gtgaaac-cccgtctctactaaaaatac-aaaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301861 78 + 4669795 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacatgg-----gtgaaac-cccgtctctactaaaaatac-aaaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260871 77 + 135778131 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacat-g-----gtgaaac-cccgtctctactaaaaatac-aaaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694253 78 - 2847728 cagatcacctgaggtcaggagttc-gagaccagcctga-ccaacgtgg-----gtgaaac-cccgtctctactaaaaatac-aaaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820599 84 + 2368649 cagatcacccgaggtcaggagttc-gagaccagcctga-ccaacaggggtttagtgaaac-cccgtctctactaaaaatacaaaaat i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059057 79 - 14256875 tggatcacctgaggtcaggagttc-aagaccagcctga-tcaacat-g-----gtgaaactcccatctctactaaaaatacaaaaat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948037 80 - 2196201 tggatcacctgaggttaggagttc-aagagcagcctgattcaacat-g-----gtgaaactcccatctctactaaaaatacaaaaat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343760 77 - 5030052 tggatcacctgaggt-aggagttcaaagaccagccgga--taacat-g-----g-gaaactcccatctctactaaaaatacaaaaat i aotNan1.NW_018492112v1 I 38 I 100 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e otoGar3.GL873580 11191398 6 - 11315646 I a score=686227.000000 s hg38.chr4_KI270789v1_alt 56657 97 + 205944 tagccaggcgtggtggtgcgtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa-tccgggaggtggaggttgcagtgagca s panTro5.chr4 192847821 97 + 194502333 tagccaggcgcagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa-tccgggaggtggaggttgcagtgagca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732071 97 + 195804263 tagccaggcgcagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaa-tccgggaggtggaggttgcagtgagca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768607 97 + 4876863 tagccaggcgtggtggtgcgtgcctgtaatcccagctacctgggaggctgaggcaggagaatcgcttgaa-tccgggaggtggaggttgcagtgggca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654145 97 + 115148730 tacccgggcgtggtggtgcatgtctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaa-tccaggaggtggaggttgcagtgagca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937103 97 + 190429646 tagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaa-cctgggagatggaggtcacagtgaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884564 97 + 189454096 tagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaa-cctgggagatggaggtcacagtgaggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262307 97 - 25927173 tagctgggtgtggtggtgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaa-cctgggagatggaggtcacagtgaggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3301939 97 + 4669795 tagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaa-cctgggagatggagatcgcagtgaggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134260948 97 + 135778131 tagctgggtgtggcggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaa-cctgggagatggaggtcgcagtgaggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694331 97 - 2847728 tagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaa-cctgggagatggagatcgcagtgaggc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820683 97 + 2368649 tagcttcgtgtggcggtgcacgcctgtaatcctagctactcgggaggctgaggcaggagaatcacttgaa-cctgggagatggaggtcgcagtgaggc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059136 98 - 14256875 tagccaggtctggtggtgcacacctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaaccccataaggcagaggttgcagtgagct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948117 98 - 2196201 tagtcaggtgtggtggtgcacatctgtaatcccagctacttgggaggctgaggcaggagaactgcttgaaccccatgaggcagaggttgcagtgaact i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e aotNan1.NW_018492112v1 3343837 100 - 5030052 I e otoGar3.GL873580 11191398 6 - 11315646 I a score=782499.000000 s hg38.chr4_KI270789v1_alt 56754 94 + 205944 gatatcgtgccac-tacactccagcctgggcaacaaaagcaaaac-ccgtct-caaaaaacccaaaagtttaattctactgaagtttttctgttaac s panTro5.chr4 192847918 94 + 194502333 gatatcgtgccac-tacactccagcctgggcaacaaaagcaaaac-ccgtct-caaaaaacccaaaagtttaattctactgaagtttttctcttaac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732168 94 + 195804263 gatatcgtgccac-tacactccagcctgggcaacaaaagcaaaac-ccgtct-caaaaaacccaaaagtttaattctactgaagtttttctcttaac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768704 94 + 4876863 gatattgtgccac-tacactccagcctgggcaacaaaagcaaaac-ccgtct-caaaaaacccaaaagtttaattctactgaagtttttctcttaac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654242 96 + 115148730 gatatcgtgccacttacactccagcctgggcaacaaaagcgaaactccgtct-caaaaaacccaaaagtttaattcagctgaagtttttctgttaac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937200 95 + 190429646 gagattgcgccac-tgcactccagcctgggcaacaaaagcaaaactccatct-caaaaaaCCCCAAAATTTAATTCAGCTAAAGTTTTTCTGTTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884661 95 + 189454096 gagattgtgccac-tgcactccagcctgggcaacaaaagcaaaactccatct-caaaaaaCCCCAAAATTTAATTCAGCTAAAGTTTTTCTGTTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262404 95 - 25927173 gagattgtgccac-tgcactccagcctgggcaacaaaagcaaaactccatct-caaaaaaCCCCAAAATTTAATTCAGCTAAAGTTTTTCTGTTAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302036 95 + 4669795 gagattgcgccac-tgcactccagcctgggcaacaaaagcaaaactccgtct-caaaaaaccccaaaatttaattcagctaaagtttttctgttaac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261045 95 + 135778131 gagattgcgccac-tgcactccagcctgggcaacaaaagcgaaactccatct-caaaaaaccccaaaatttaattcagctaaagtttttctgttaac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694428 95 - 2847728 gagattgcgccac-tgcactccagcctgggcaacaaaagcaaaactccgtct-caaaaaaccccaaaatttaattcagctaaagtttttctgttaac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820780 95 + 2368649 gagattgtgccac-tgcactccagcctgggcaacaaaagcgaaactccatct-caaaaaaCCCCAAAATTTAATTCAACTAAAGTTTTTCTGTTAAC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059234 96 - 14256875 gagattgcaccat-tgcactccagcctgggcaacaaaagcgaaactccgtctccaaaaaaCCCAAAAGTTTAATTCAACTGAAGTTTTTCTGTTAAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948215 96 - 2196201 tagatagcaccat-tgcactccagcctgggcaacaaaagcgaaaccccgtctccaaaaaacccaaaagtttAATTCAACTGAAGTTTTTCTGTTAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3343937 96 - 5030052 gatatagcgccat-tgcactctagcctgggcaacaaaagcgaaactccgtctccaaaaaaCCCAAAAATTTAATTCAACTGAAGTTTTTCTGTTAAC i aotNan1.NW_018492112v1 I 100 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I e otoGar3.GL873580 11191398 6 - 11315646 I a score=10920.000000 s hg38.chr4_KI270789v1_alt 56848 1 + 205944 a s panTro5.chr4 192848012 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732262 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768798 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654338 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937295 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884756 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262499 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302131 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261140 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694523 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820875 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059330 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948311 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344033 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191404 1 - 11315646 A i otoGar3.GL873580 I 6 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e dasNov3.JH570353 1391781 5 - 2520184 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I a score=22137.000000 s hg38.chr4_KI270789v1_alt 56849 3 + 205944 CTG s panTro5.chr4 192848013 3 + 194502333 CTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732263 3 + 195804263 CTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768799 3 + 4876863 CTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654339 3 + 115148730 CTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937296 3 + 190429646 GTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884757 3 + 189454096 GTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262500 3 - 25927173 GTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302132 3 + 4669795 GTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261141 3 + 135778131 CTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694524 3 - 2847728 GTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820876 3 + 2368649 CTG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059331 3 - 14256875 CTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948312 3 - 2196201 CTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344034 3 - 5030052 CTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191405 3 - 11315646 CTA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1391786 3 - 2520184 CTA i dasNov3.JH570353 I 5 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e canFam3.chr16 16884658 18 - 59632846 I e mm10.chr8 86521141 4 - 129401213 I a score=263916.000000 s hg38.chr4_KI270789v1_alt 56852 29 + 205944 TGTTATTATTTTATCTTTT-GA--TGAAAGGC- s panTro5.chr4 192848016 29 + 194502333 TGTTATTATTTAATCTTTT-GA--TGAAAGGC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732266 29 + 195804263 TGTTATTATTTAATCTTTT-GA--TGAAAGGC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768802 29 + 4876863 TGTAATTATTTAATCTTTT-GA--TGAAAGGC- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654342 29 + 115148730 TGTTATTATTTAATCTTTT-GA--TGAAAGGC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937299 29 + 190429646 TGTTATTATTTAACCTTTT-TA--TGAAAGGC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884760 29 + 189454096 TGTTATTATTTAACCTTTT-TA--TGAAAGGC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262503 29 - 25927173 TGTTATTATTTAACCTTTT-TA--TGAAAGGC- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302135 29 + 4669795 TGTTATTATTTAACCTTTT-TA--TGAAAGGC- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261144 29 + 135778131 TGTTATGATTTAACCTTTT-TA--TGAAAGGC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694527 29 - 2847728 TGTTATTATTTAACCTTTT-TA--TGAAAGGC- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820879 29 + 2368649 TGTTATTATTTAATCTTTT-TA--TGAAAGGC- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059334 29 - 14256875 TGTTATTATTTAGTCTTTT-TA--TGAACGGC- i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 948315 29 - 2196201 TGTTATAATTTAGTCTTTT-TA--TGAACAGC- i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3344037 29 - 5030052 TGTTATTATTTAGTCTTTT-TA--TGAACGGC- i aotNan1.NW_018492112v1 C 0 I 1 s otoGar3.GL873580 11191408 31 - 11315646 TGTTATCATTTAAATCTTA-CAAGTGAGAGTA- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521145 28 - 129401213 TGATACCATTTAACCTATT--A--GGAAAAGC- i mm10.chr8 I 4 C 0 s dasNov3.JH570353 1391789 31 - 2520184 TGCTACCTGTCAATCTATTATA--TGAATAGAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I e canFam3.chr16 16884658 18 - 59632846 I a score=190674.000000 s hg38.chr4_KI270789v1_alt 56881 18 + 205944 A----AATGATATAAACAAGAA s panTro5.chr4 192848045 18 + 194502333 A----AATGATATAAACAAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732295 18 + 195804263 A----AATGATATAAACAAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768831 18 + 4876863 A----AATGATATAAACAAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654371 18 + 115148730 A----AATGATATAAACAAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937328 18 + 190429646 A----AATAATATAAACAAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884789 18 + 189454096 A----AATAATATAAACAAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262532 18 - 25927173 A----AATAATATAAACAAGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302164 18 + 4669795 A----AATAATATAAACAAGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261173 18 + 135778131 A----AATAATATAAACAAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694556 18 - 2847728 A----AATAATATAAACAAGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820908 18 + 2368649 A----AATGATATAAACAAGAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059364 18 - 14256875 A----AATGATACAAGCAAGAA i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 948345 18 - 2196201 A----AATGACACAAGCAAGAA i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3344067 18 - 5030052 A----AATGATACAAGCAAGAA i aotNan1.NW_018492112v1 I 1 C 0 s otoGar3.GL873580 11191439 18 - 11315646 A----AATGATATACGTGAGAC i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86521173 21 - 129401213 ATAACAAAAAAATAAATAAAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16884676 17 - 59632846 A----AATGATA-AAATGAGAA i canFam3.chr16 I 18 I 1 s dasNov3.JH570353 1391820 18 - 2520184 ----CAATGATATAAATGAGAA i dasNov3.JH570353 C 0 I 1 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895245 49 + 3993831 I e micMur3.chr14 17474678 49 - 93316391 I a score=1591684.000000 s hg38.chr4_KI270789v1_alt 56899 109 + 205944 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGCTCAATATATCTGGCCATAAAATTCTTTTAAA s panTro5.chr4 192848063 109 + 194502333 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTGTTGCTCTGGTCAGTATATCTGGCCATAAAATTCTTTTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732313 109 + 195804263 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTGTTGCTCTGGTCAGTATATCTGGCCATAAAATTCTTTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768849 109 + 4876863 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTGTTGCTCTGGTCAGTATATCTGGCCATAAAATTCTTTTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654389 111 + 115148730 CTTGGAATCCA-TTTGTGAATAATGTATAAATAAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937346 109 + 190429646 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATGGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884807 109 + 189454096 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATGGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262550 109 - 25927173 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATGGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302182 109 + 4669795 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATGGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTGAATATATCTGGCCATAAAATTCTTTTATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261191 109 + 135778131 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATAGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694574 109 - 2847728 CTTGGAAT--A-TTTGTGAATAATGTATAAATGAATGGTTTCTGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAATATATCTGGCCATAAAATTCTTTTATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 820926 107 + 2368649 CTTGGAAT--C-TTTGTGAATAATGTATAAATAAATGGTT--TGTTTATTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGGTCAACATATCTGGCCATAAAATTCTTTTAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059382 108 - 14256875 CTTGGAAT--A-TTTGTGAACAATGTATAAATAGATCAGTTCTGTTTAGTCCCTGTATTCTGTTAAAAGTTGTTGCTCTGCTCAATATATCTGGCCATAAAA-TCTTTTAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948363 108 - 2196201 CTTGGAAT--A-TTTGTGAATAATGTATAAATAGATTGGTTCTGTTTAGTCTCTGTATTCTGTTAAAAGTTTTTGCTCTGCTCGATATATCTGGCCATAAAA-TCTTTTAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344085 108 - 5030052 CTTGGAAT--A-TTTGTGAATAATGTATAAATAGATCGTTTCTGCTTAGTCTCTGTATTCTGTGAAAAGTTTTTGCTCTGCTCAATGTATCTGGCCATAAAA-TCTTTTAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474727 109 - 93316391 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATCGTCCCTGTTTGGTCTCTGTATTCTGTTAAAAGCTTTGGCTCTGTTCAATACATCTGGCTGTAATATTCTTTTAAA i micMur3.chr14 I 49 C 0 s proCoq1.NW_012145301v1 3895294 109 + 3993831 CTTGGAAT--A-TTTGTGAATAATGTATAAATAAATAGTCCCTGTTTGGTCTGTGTATTCTGTTAAAAGTTTTGGCTCTATTCAATACATCTGGCTGTAAAATTCTTTTAAA i proCoq1.NW_012145301v1 I 49 I 112 s otoGar3.GL873580 11191458 109 - 11315646 CTGAGAAT--A-TTTGTGGATAACGTGTAAATAAATAGTCTATGTTTGGTCTCCATATTCTGTTTAAAGTTTTGACTCTGTTCAATACATCTGGCTCTAAAATCCTTTTAAA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86521194 104 - 129401213 CTTGAAAT--AGTTCGTGACTAATGTATGAAGA----GTTTCTGCTTGTT--GTGTCTTCTGTTCAAAGTTTGGGCTCTACTCAATGTGTCTACCTGTAAAAATCTTTAAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16884694 109 - 59632846 TTTGGAAT--A-TTTGTGAATAAGGTATAAATGAGCAGTTTCAGTTTGGTATGTGTAGTCTGTTAAAAGTATTGGTTCTGCTCAATATATTGGGTGataaaatttttttaaa i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1391839 108 - 2520184 TTTGTAGT--A-TTTGTGAATAATGTTTAAAGAAACAGTGCCTGTTTGGTGTCTGGATTCTGTT-AAGGTTTTGGCTGTTCTCAATATATCTGGCTATAATATTTTTAAAAA i dasNov3.JH570353 I 1 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=17290.000000 s hg38.chr4_KI270789v1_alt 57008 1 + 205944 T s panTro5.chr4 192848172 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732422 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768958 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654500 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937455 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884916 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262659 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302291 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261300 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694683 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821033 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059490 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948471 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344193 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474836 1 - 93316391 T i micMur3.chr14 C 0 I 131 s otoGar3.GL873580 11191567 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521298 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr16 16884803 1 - 59632846 t i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1391947 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895403 112 + 3993831 I a score=854614.000000 s hg38.chr4_KI270789v1_alt 57009 119 + 205944 CCTGTATAATTTTAAAAGCAAATTTGATGCATGTGCAACTTATTTTATTTTA----TT--TT-TTTTGAGGCTGTTTGTTACAATGGAAATTGCCTTAACAAGTC--TCAT-GT-------------------------------------------------------------------------------GGCACATGTGGTGCC s panTro5.chr4 192848173 119 + 194502333 CCTGTATAACTTTAAAAGCAAATTTGATGCATGTGCAACTTATTTTATTTTA----TT--TT-TTTTGAGGCTGTTTGTTACAATGGAAATTGCCTTAACAAGTC--TCAT-GC-------------------------------------------------------------------------------AGCACGTGCGGTGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732423 119 + 195804263 CCTGTATAACTTTAAAAGCAAATTTGATGCATGTGCAACTTATTTTATTTTA----TC--TT-TTTTGAGGCTGTTTGTTACAATGGAAATTGCCTTAACAAGTC--TCAT-GC-------------------------------------------------------------------------------GGCACGTGCGGTGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3768959 120 + 4876863 CCTGTATAATTTTAAAAGCAAATTTGATGCATGTGCAACTTATTTTATTTTA----TT--TTATTTTGAGGCTGTTTGTTACAGTGGAAATTGCCTTAACAAGTC--TCAT-GC-------------------------------------------------------------------------------GGCACGTGCGGTGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654501 116 + 115148730 CCTGTATAATTTTAAAAGCAAATTTGATGCATGTGCAACTTA-TTTATTTTA----TT-----TTTTGAGGCTGTTTGTTACAATGGAAGTTGCATTAACAAGTC--TCAT-GC-------------------------------------------------------------------------------GGCGCATGCGGTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937456 110 + 190429646 CCTGTATAATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTA----TT--TT-TTTTGAGGCTATTTGTTACAGTGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------AGCACATGTGGTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187884917 110 + 189454096 CCTGTATAATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTA----TT--TT-TTTTGAGGCTATTTGTTACAGTGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------AGCACATGTGGTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262660 110 - 25927173 CCTGTAT-ATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTAT---TT--TT-TTTTTAGGCTATTTGTTACAGTGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------AGCACATGTGGTGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302292 110 + 4669795 CCTGTATAATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTA----TT--TT-TTTTGAGGCTATTTGTTACAGTGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------GGCACATGTGGTGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261301 111 + 135778131 CCTGTGTAATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTAT---TT--TT-TTTTGACGCTATTTGTTACAATGGAAATTGCATTAACAAGCC--TCAT-GT-------------------------------------------------------------------------------GGCACATGTGGTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694684 110 - 2847728 CCTGTATAATTTAAAAAGCAAATTTGATGCATGTGCAAC---------TTTA----TT--TT-TTTTGAGGCTATTTGTTACAGTGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------GGCACATGTGGTGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821034 114 + 2368649 CCTCTATAATTTAAAAAGCAATGTTGATGCATGTGCAAC---------TTTATTTATT--TT-TTTTGAGGCTATTTGTTACAATGGAAATTGCATTAACAAGCC--TCAT-GC-------------------------------------------------------------------------------GGCACATGTGGTGTC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059491 179 - 14256875 CCTATATAATTTAAAAAGCAAATATAATGCATGTGCAACTT-------TTTA----TTTATT-TTTTGAGGC----TGTTATCCTAGAAATTGCATCGACAAGTC--TCAT-GCAACATGTGTGAGAATACAATGCGTaaat---------tagcgggcgtggtggtgggtgcctctagtctcagctactcT-GCCACATCTGGTGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948472 178 - 2196201 CCTATATAATTGAAAAAGCAAACATAATGCATGTGCAACTT-------TTAA----TTTATT-TTTTGAGGC----TGTTATCCTGGAAATTGCTTGGACAAGTC--TCAT-GCAACATGCGTGAGAATaaaatgcgtaaat---------gagcaggcgtggtggcgggcgc--gtagtctcagctactccggCCACATGCGGTGCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344194 184 - 5030052 CCTATATAATTTAAAAAGCAAATGTAATGCATGTGCAACTT-------TTTA----TTTATT-TTTTGAAGCTGTTTGTTATCCTGGAAATTGCATCGATAAGTC--TCAT-GCAACAAGCATGAGAATaaaatgcgtaaattagcgggcgtg---------gtggtgggcgcctctagtctcagctactctggCCACGTGCGGTGCC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191568 110 - 11315646 TCTATGTAGCATGGGAAGAAAATTCAATGTATGTGCAAT---------TGCA----TT--TT-CCTTTGAGATA---ATTATAAGGGAAACCCCACTGACAGACAGGTCATAGC-------------------------------------------------------------------------------AGCCCCTAAGGTTCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521299 106 - 129401213 TCCATATAAGTTACAAAA-AAATTCAATGTAAGTGCAAC---------TGAA----TT--TC-CCTTGAAAGAATTTATAACAGGAGATATTTC--CAACAAGGC--TCAA-AC-------------------------------------------------------------------------------ATCTCACAGGTTAC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16884804 110 - 59632846 tctatataatttaGAAAGCAAATTCAATGTACGTGCAAC---------AGCA----TT--TTCCTTTGAGACAATTTGTAATGAGAGAAATTCCACTGGCAAGTC--TTAT-GC-------------------------------------------------------------------------------AACA-ATAAGTTGTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1391948 111 - 2520184 TCTGTATAGTTTAGCAAGCAAATGCAATATATGAGCAAC---------TGCA----TT--TCCCTTTGAGACAACTTATTATAAAAGAAATTTCTCTGACAAGTC--TCAT-TC-------------------------------------------------------------------------------AACATGTAAGGTGCA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895403 112 + 3993831 I e micMur3.chr14 17474837 131 - 93316391 I a score=184792.000000 s hg38.chr4_KI270789v1_alt 57128 22 + 205944 CAGAGCATTC------------------------------------------------------T-G-AAAGTTATGG s panTro5.chr4 192848292 22 + 194502333 CAGAGCATTC------------------------------------------------------T-G-AAAGTTATGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732542 22 + 195804263 CAGAGCATTC------------------------------------------------------T-G-AAAGTTATGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769079 22 + 4876863 CAGAGCATTC------------------------------------------------------T-G-AAAGTTATGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654617 22 + 115148730 CAGAGCATTC------------------------------------------------------T-G-AAAGTTGTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937566 25 + 190429646 CAGAGCATTC---------------------------------------------------TTCT-G-AAAGTTACGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885027 25 + 189454096 CAGAGCATTC---------------------------------------------------TTCT-G-AAAGTTACGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262770 25 - 25927173 CAGAGCATTC---------------------------------------------------TTCT-G-AAAGTTACGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302402 25 + 4669795 CAGAGCATTC---------------------------------------------------TTCT-G-AAAGTTACGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261412 76 + 135778131 CAGAGTGTTCTGAGTGCCCAGAGTGTTCTGAGTGCCCAGAGCGTTCTGAGTGCCCAGAGCGTTCT-G-AAAGTTACGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694794 25 - 2847728 CAGAGCATTC---------------------------------------------------TTCT-G-AAAGTTACGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821148 40 + 2368649 CTGAGCATTC------------------------------------TGAGTGCCCTGAGCCTTCT-G-AAAGTTACGG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059670 22 - 14256875 CAGAGCATTC------------------------------------------------------T-A-AACGTTACGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948650 22 - 2196201 CAGAGCATTC------------------------------------------------------T-A-AACGTTACGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344378 22 - 5030052 CAGAGCATTC------------------------------------------------------T-G-AACGTTACGG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3895515 22 + 3993831 CAGAGCATTC------------------------------------------------------T-G-AACGCTCTGA i proCoq1.NW_012145301v1 I 112 C 0 s otoGar3.GL873580 11191678 21 - 11315646 CAGAG-ATCC------------------------------------------------------T-G-AAAGTTACGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521405 20 - 129401213 -AAAGCAT-C------------------------------------------------------T-G-AAAGCTTTGG i mm10.chr8 C 0 C 0 s canFam3.chr16 16884914 23 - 59632846 GGGAACTTTC------------------------------------------------------TAA-AAAGTTACAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392059 22 - 2520184 CAGAG-ATTC------------------------------------------------------T-GAAAAGTGATAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e micMur3.chr14 17474837 131 - 93316391 I a score=1661885.000000 s hg38.chr4_KI270789v1_alt 57150 125 + 205944 TTTTGAAAGCAGTCGTTGTGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACATTCAAAACCATCTTCCATTTTTATCCTTTTGTGGTAATATTTATCATTTA--TAAAAAGGA------A-------TT s panTro5.chr4 192848314 125 + 194502333 TTTTGAAAGCAGTCGCTGTGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACATTCAAAACCATCTTCCATTTTTATCCTTTTGTGGTAATATTTACCATTTA--TAAAAAGGA------A-------TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732564 125 + 195804263 TTTTGAAAGCAGTCGCTGTGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACATTCAAAACCATCTTCCATTTTTATCCTTTTGTGGTAATATTTACCATTTA--TAAAAAGGA------A-------TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769101 125 + 4876863 TTTTGAAAGCAGTCGTTGTGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACATTCAAAACCATCTTCCATTTTTATCCTTTTGTGGTAGTATTTATCATTTA--TAAAAAGGA------A-------TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654639 125 + 115148730 TTTTGAAAACAGTTGTTGTGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCAACATTCAAAACCACCTTCCGTTTTTATCCTTTTGTGGTAATATGTATCATTTA--TAAAAAGGA------A-------TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937591 125 + 190429646 TTTTGAAGGCAGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACGTTCAAAACCACCTTCCATTTTTGTCATTTTGTGGTAATATCTATCATTTA--TAAAAAGGA------A-------TT i rheMac8.chr5 C 0 I 199 s macFas5.chr5 187885052 125 + 189454096 TTTTGAAGGCAGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACGTTCAAAACCACCTTCCATTTTTGTCATTTTGTGGTAATATCTATCATTTA--TAAAAAGGA------A-------TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24262795 125 - 25927173 TTTTGAAGGCAGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACGTTCAAAACCACCTTCCATTTTTGTCATTTTGTGGTAATATCTATCATTTA--TAAGAAGGA------A-------TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302427 125 + 4669795 TTTTGAAGGCAGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACGTTCAAAACCACTTTCCATTTTTGTCATTTTGTGGTAATATCTATCATTTA--TAAAAAGGA------A-------TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261488 125 + 135778131 TTTTGAAGGCAGTCGTTGGGGCGATGTTGTCCTAATTAAAGTTCTCGGGCAGTTTCGCCGACATTCAAAACCACCTTCCATTTTTGTCATTTTGTGGTAATATTTATCATTTA--TAAAAAGGA------A-------TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2694819 125 - 2847728 TTTTGAAGGCAGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTGCCGACGTTCAAAACCACTTTCCATTTTTGTCATTTTGTGGTAATATCTATCATTTA--TAAAAAGGA------A-------TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821188 123 + 2368649 TTTTGAAGGCGGTCGTTGGGGCGACATTGTCCTAATTAAAGTTCTCGGGCAGTTTTG-CGACATTCAAAACCACCTTCCATTTTTGTCATTTTGTGGTAATATTTATCATTTA--TAA-AAGGA------A-------TT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13059692 125 - 14256875 TTTTTAGAGCAGTTGCTGGGAAGATACTGTCCTAATTAAAGTTCTTGGCCAGTTTTGCCAACATTCAAAACCACCTTCCATTTTTATCATTTTGTGGTAATATTTATCATTTA--TAAAAAGGA------A-------TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948672 123 - 2196201 -TTTTAGAGCAGTCGCTGGGAAGATACTGTCCTAATTAAAGCTCTCAGCCAGTTTTGCCAACATTC-AAACCACCTTCCATTTTTATCATTTTGTGGTAATATTTATCGTTTA--TTAAAAGGA------A-------TT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344400 124 - 5030052 TTTTTAGAGCAGTCGTTGGG-GGACATTGTCCTAATTACAGTTCTCGGCCAGTTTTGCCAACATTCAAAACCACCTTCCATTTTTATCACTTTGTGGTAATATTTATCATTTA--TAAAAAGGA------A-------TT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17474968 123 - 93316391 TTTTTAAAGCAGTCACTGGGGCTACGTTGTCCTAATTTAAGTTCCTGGACACTTTTGCCAACATCCAAAACCACCTTCCAGTTT--TCCTTTTGTGGTAGGATTTATCATTTA--TAAAAAAGA------A-------TT i micMur3.chr14 I 131 C 0 s proCoq1.NW_012145301v1 3895537 123 + 3993831 TTTCTAAAGCAGTCGTTGGGACTACGTCGTCCTAATTAAAGTTCCTGGGCAGTTTTGCCAACATACAAAACCACCTTCTAGTTT--TCCTTCTGTGGTAGGATTTATCATTTG--TAAAAAAGA------A-------TT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191699 123 - 11315646 TTTCTAAAGCAGTCAGTGGAGCTCCATCCTCTGACTTAAAGTTCTTGGGCAGTTTTGCTAACATACAAAACCACCGTCCAGTTT--TCCTTTTGTGGTAGTATTTATCATTTA--TAAAAAAGA------A-------TT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521425 126 - 129401213 TGTGAAAAGCAGATGCTGGGATTATAGTGGCATATCTAATG--CTTAGGCA-TACTGCTAGCAGCCAAAAC---TTTCAATTCT--GCCTTTTGTGGTAATATTTATCATTTAATTAAAAAAAG------AGAAAACTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16884937 123 - 59632846 TTTTTAAAGCAGCCATTGGGACCACATTGTCATAATTAAACTTCTTTGGCAGTTTTGCCAACATCTAAGACCACCTTCAGTGTT--CCATTTCATAGTAGTATTTGTCATTTA--TAGAAAGGT------A-------TT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392081 127 - 2520184 ATTTTAAAGCAGTCCTTTAGGTTCTACTGCCATAATCAAAGTTTTTAGGCAATTTTGCCAACAT-CAAATCCACCTTCAGGCTT--TCCTTTCTTGGTTTTGTTT-TCAGTAA--AAAAAATGATCAAGTA-------TT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=165379.000000 s hg38.chr4_KI270789v1_alt 57275 13 + 205944 CCAACACCTCTTT s panTro5.chr4 192848439 13 + 194502333 CCAACACCTCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732689 13 + 195804263 CCAACACCTCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769226 13 + 4876863 CCAACACCTCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654764 13 + 115148730 CCAACACCTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937915 13 + 190429646 CCAACACCTCTTG i rheMac8.chr5 I 199 C 0 s macFas5.chr5 187885177 13 + 189454096 CCAACACCttttt i macFas5.chr5 C 0 I 199 s macNem1.NW_012013133v1 24262920 13 - 25927173 CCAACACCttttt i macNem1.NW_012013133v1 C 0 I 205 s cerAty1.NW_012001672v1 3302552 13 + 4669795 CCAACACCttttt i cerAty1.NW_012001672v1 C 0 I 199 s chlSab2.chr7 134261613 13 + 135778131 CCAACACCttttt i chlSab2.chr7 C 0 I 199 s manLeu1.NW_012102221v1 2694944 13 - 2847728 CCAACACCttttt i manLeu1.NW_012102221v1 C 0 I 199 s colAng1.NW_012116221v1 821311 13 + 2368649 CCAGCACCttttt i colAng1.NW_012116221v1 C 0 I 287 s saiBol1.JH378165 13059817 13 - 14256875 CTAACACTTCTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948795 13 - 2196201 CCAACACTTCTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344524 13 - 5030052 CCAACACTTCTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475091 13 - 93316391 CCAACCCTTCCTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3895660 13 + 3993831 CCAACACTTCCTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11191822 13 - 11315646 CCAACCCTTCCTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521551 12 - 129401213 -CAACCTTTTCTC i mm10.chr8 C 0 I 1 s canFam3.chr16 16885060 13 - 59632846 TCACCCTTTCTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392208 13 - 2520184 TCAACTGTTCGCT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=79858.000000 s hg38.chr4_KI270789v1_alt 57288 6 + 205944 TCTATG s panTro5.chr4 192848452 6 + 194502333 TCTATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732702 6 + 195804263 TCTATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769239 6 + 4876863 TCTATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654777 6 + 115148730 TCTATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937928 6 + 190429646 TCTGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885389 6 + 189454096 TCTGTG i macFas5.chr5 I 199 C 0 s cerAty1.NW_012001672v1 3302764 6 + 4669795 TCTGTG i cerAty1.NW_012001672v1 I 199 C 0 s chlSab2.chr7 134261825 6 + 135778131 TCTGTG i chlSab2.chr7 I 199 C 0 s manLeu1.NW_012102221v1 2695156 6 - 2847728 TCTGTG i manLeu1.NW_012102221v1 I 199 C 0 s saiBol1.JH378165 13059830 6 - 14256875 TCTGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948808 6 - 2196201 TCTATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344537 6 - 5030052 TCTATG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475104 6 - 93316391 TCTATG i micMur3.chr14 C 0 I 191 s proCoq1.NW_012145301v1 3895673 6 + 3993831 TCTATG i proCoq1.NW_012145301v1 C 0 I 187 s otoGar3.GL873580 11191835 6 - 11315646 CCTATG i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86521564 6 - 129401213 TCTTTG i mm10.chr8 I 1 I 1 s canFam3.chr16 16885073 6 - 59632846 CCTATG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1392221 6 - 2520184 TCTATG i dasNov3.JH570353 C 0 I 1 e calJac3.chr3 189573892 187 - 190850796 I e colAng1.NW_012116221v1 821324 287 + 2368649 I e macNem1.NW_012013133v1 24262933 205 - 25927173 I a score=4664.000000 s hg38.chr4_KI270789v1_alt 57294 1 + 205944 T s panTro5.chr4 192848458 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732708 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769245 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654783 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s saiBol1.JH378165 13059836 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948814 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344543 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191842 1 - 11315646 T i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86521571 1 - 129401213 T i mm10.chr8 I 1 C 0 s canFam3.chr16 16885080 1 - 59632846 T i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1392228 1 - 2520184 T i dasNov3.JH570353 I 1 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895679 187 + 3993831 I e micMur3.chr14 17475110 191 - 93316391 I e colAng1.NW_012116221v1 821324 287 + 2368649 I e manLeu1.NW_012102221v1 2695162 0 - 2847728 C e chlSab2.chr7 134261831 0 + 135778131 C e cerAty1.NW_012001672v1 3302770 0 + 4669795 C e macNem1.NW_012013133v1 24262933 205 - 25927173 I e macFas5.chr5 187885395 0 + 189454096 C e rheMac8.chr5 188937934 0 + 190429646 C a score=24182.000000 s hg38.chr4_KI270789v1_alt 57295 3 + 205944 ATA s panTro5.chr4 192848459 3 + 194502333 ATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732709 3 + 195804263 ATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769246 3 + 4876863 ATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654784 3 + 115148730 ATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937934 3 + 190429646 ATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885395 3 + 189454096 ATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263138 3 - 25927173 ATA i macNem1.NW_012013133v1 I 205 C 0 s cerAty1.NW_012001672v1 3302770 3 + 4669795 ATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261831 3 + 135778131 ATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695162 3 - 2847728 ATA i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13059837 3 - 14256875 GTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948815 2 - 2196201 GT- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344544 3 - 5030052 GTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191843 3 - 11315646 ATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521572 3 - 129401213 GTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16885081 3 - 59632846 ATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392229 3 - 2520184 ATA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895679 187 + 3993831 I e micMur3.chr14 17475110 191 - 93316391 I e colAng1.NW_012116221v1 821324 287 + 2368649 I a score=1415978.000000 s hg38.chr4_KI270789v1_alt 57298 164 + 205944 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGAAGTG-GTCTCGTTGCGGCAGCAGAGCTCCCCTGGTGCACTTCT--ACTCACGGGTTTGTTGAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGTGCCCGTGTTGGCGCTGACGC s panTro5.chr4 192848462 164 + 194502333 ATCTCCCAACATTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGAAGTG-GTCTTGTTGCAGCAGCAGAGCTCCCCTGGTGCACTTTT--ACTCACGCGTTTGTTGAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGTGCCCGTGTTGGCGCTGACGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732712 164 + 195804263 ATCTCCCAACATTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGAAGTG-GTCTTGTTGCAGCAGCAGAGCTCCCCTGGTGCACTTTT--ACTCACGCGTTTGTTGAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGTGCCCGTGTTGGCGCTGACAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769249 164 + 4876863 ATCTCCCAACATTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGAAGTG-GTCTTGTTGCGGCAGCAGAGCTCCGCTGGTGCACTTTT--ACTCACGGGTTTGTTGAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGTGCCCGTGTTGGCGCTGAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654787 164 + 115148730 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGAAGCG-GTCTTGCTGCGGCAGCAGAGCTCCACTGTTGCACTTTT--ACTCACGGGTTTGTTGAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCACGTGCCCGTGTTGGTGCTGACGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188937937 161 + 190429646 ATCTCCCAACGTTCCTGGTCAAAGCACTTTGCTCCCA-AATTCCCAGACGTG-GTCTTGGT--GGCAGCAGAGCTCCACTGCCGCACTTTC---CCGCTGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCGTGTGCCTGTGTTGGTGCCGACGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885398 161 + 189454096 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AATTCCCAGACGTG-GTCTTGGT--GGCAGCAGAGCTCCACTGCCGCACTTTC---CCGCTGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCGTGTGCCTGTGTTGGTGCCGACGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263141 162 - 25927173 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AATTCCCAGACGTG-GTCTTGGTG-GGCAGCAGAGCTCCACTGCCGCACTTTC---CCGCTGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCGTGTGCCTGTGTTGGTGCCGACGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302773 162 + 4669795 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCACCCA-AATTCCCAGACGTG-GTCTTGGTG-GGCCGCAGAGCTCCACTGCCGCACTTGC---CTGCTGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGGGCCTGTGTTGGTGCCGACGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261834 161 + 135778131 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AATTACCAGACGTG-GTCTTGGTG-GGCAGCAGAGCTCCACTGCCGCACTTTC---C-GATGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGGACTGCGTGCGCCTATGTTGGTGCTGACAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695165 162 - 2847728 ATCTCCCAACGTTCCTGGTCAAAGCAGTTTGCACCCA-AATTCCCAGACGTG-GTCTTGGTG-GGCCGCAGAGCTCCACTGCCGCACTTGC---CTGCTGGGTTTGTTTAACGTGTAGCTTTACCCACCTTGAGGCAGAACTGCATGGGCCTGTGTTGGTGCCGACGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821611 154 + 2368649 ATCTCCCCACGTTCCTGGTCAAAGCAGTTTGCTCCCA-AACTACCAGACGCG-GTCTTGGTG-GGCAGCAGAGCTCCACTG--------TC---CCGATGGGTTTGTTTAACGTGTAGCTTTACCCACCGTGCGGCAGAACTGCATGTGCCTGTGTTGGTGCTGAGGC i colAng1.NW_012116221v1 I 287 C 0 s saiBol1.JH378165 13059840 160 - 14256875 ATCTGCCAACGTTCATGGTCAACACGGTTTGCTCCCA-AATTACCGAAAGTG-GTGTTGA---GGCAGCTGAGCTGCACTGGGGCACTCCT--ACTTCTGTGTTTGTTTAAGGTGTAGCTTTACCCACCCA-GAGCAGAACTGTATGTGCTGGTATTGCTGTTGACAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948817 154 - 2196201 -------AACGTTCATGGTCAACACGGTTTGCTCCCA-AATTACCGAAAGTG-TTGTTGT---GGCGGCAGAGCTCCACGGGTGCACTTCT--ACTTCTGTGTTTGTTTAATGTGTAGCCTTACCCATCCAGGAGCAGGACTGTACGTGCTGATATTGCTGTTGATGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344547 161 - 5030052 ATCTGCCAACGTTCACGGTCAACACGGTTTGCTCCCA-AATTACCGAAAGTG-TTGTTGT---GGCGGCAGAGCTCCGCCGGTGCCCTTCT--ACTTCTGTGTTTGTTTAATGTGTAGCTTTACCCTTCCAGAAGCAGAACTGTATGTGCTGGTACTGCTGTTGATGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11191846 167 - 11315646 ATTAGTCAAGGTTCATGGCCAAAATAGATTACTCCCAGAATTACCACAAGAG-TTCTGCGGGCAGCAGCAGAGCCACGCTGGTGCACTTATTCATTTATTTGTTTGTTTAATACACAGCTCTGCCTGTCTTGAAGGAGAACTGCAGGCCCTCGTCTTGGTTCTGATGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86521575 163 - 129401213 AATAGTCAAGGTTCATGGTCAATGGAATTTGCTCCTGGAATTTCTGTGAGTGAGCATTGGTC-AGCCACAGATCTGAATTGATGTGTTTAT----TTATTCATGTGTTTAATATATAGCTTTACCCATCTCCCGGTACAACTGCATGTGCTGGGTTTGGTTTTGATGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16885084 159 - 59632846 GTTGGTCAAGGTTCATGGTCAGAATAGATTGCTCCCAGTATTACTGCAAGTG-GTCTTTGGGCAGCAGCAGAGTTATGCTGGGAGACTTAT--------TTATTTATTGTATGTGTAGCTCTACCCATCTTGAAACAGAACTGCATGTGCTGGTCTCGATTTTGATGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392232 154 - 2520184 GTTGGTCAAGTTTCACGGTCAAGATAGATTGCTCCCAGAATTTCCACGAGTG-GTCTCTG---GACAGTGG-------CGGCAGCACTCTG---CTTGTTTAATTATTCGCTGGAGAGCTCTGCCCACCTCGAAGCAGAGCTGTGCGCGCTGGCCTCAGTTATGATGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3895679 187 + 3993831 I e micMur3.chr14 17475110 191 - 93316391 I a score=2714916.000000 s hg38.chr4_KI270789v1_alt 57462 196 + 205944 ATGATGTGTGGTGCACGGATGGAGCAAAGGTGAATATCTCCCCACAGCAGACCTCCGAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACA------------GTGATCAGGGCCAGTTTCCAATATGGAGACAAGAGCTCTTTAAT----CACGCTCTTCCCTGCAAAAGAAAAAGATTGGCATTTAACAGAGAGCTGT----------AAG s panTro5.chr4 192848626 196 + 194502333 ATGATGTGTGGTGCCCGGATGGAGAAAAGGTGAACATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACA------------GTGATCAGGGCCAGTTTCCAATATGGAGACAAGAGCTCTTTAAT----CACGCTCTTCTCTGCAAAAGAGAAAGATTGGCATTTAACAGAGAGCTGT----------AAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192732876 196 + 195804263 ATGATGTGTGGTGCCCGGATGGAGAAAAGGTGAACATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACA------------GTGATCAGGGCCAGTTTCCAATATGGAGACAAGAGCTCTTTAAT----CACGCTCTTCTCTGCAAAAGAGAAAGATTGGCATTTAACAGAGAGCTGT----------AAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769413 196 + 4876863 ATGATGTGTGGTGCACGGATGGAGAAAAGGTGAACATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACA------------GTGATCAGGGCCAGTTTCCAATATGGAGACAGGAGCTCTTTAAT----CACGCTCTTCCCTGCAAAAGAGAAAGATTGGCATTTAACAGAGAGCTGT----------AAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112654951 195 + 115148730 ATGACGTGTGGTGCATGGATGGAGAAAAGGTGAATATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATACTTCAGTGTGCTGCCACA------------GTGGTCA-GGCCAGTTTCTAATATGGAGACAAGAGCTCTTTAAT----CACGCTGTTCCCTGCAAAAGAGAAAGATTGGCATTTAACAGAGAGCTGT----------AAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938098 200 + 190429646 ATGACCTGTGGTGCACGAAAGGAGAAAAGGTGAATATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTCCAGTACGGAGACAAGGACACTTTAAT----CACGCTCTTCCCTGTAAAAGAGAAAGATTGGCCTTTCACAGAGAGCTGT------GATAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885559 200 + 189454096 ATGACCTGTGGTGCACGAAAGGAGAAAAGGTGAATATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTCCAGTACGGAGACAAGGACACTTTAAT----CACGCTCTTCCCTGTAAAAGAGAAAGATTGGCCTTTCACAGAGAGCTGT------GATAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263303 200 - 25927173 ATGACCTGTGGTGCACGAAAGGAGAAAAGGTGAATATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTCCAGTACGGAGACAAGGACACTTTAAT----CACGCTCTTCCCTGTAAAAGACAAAGATTGGCCTTTCACAGAGAGCTGT------GATAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3302935 206 + 4669795 ATGACCTGTGGTGCACGGAAGGAGAAAAGGTGAGTATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTCCAGTACGGAGACAAGGACACTTTAAT----CACGCTCTTCCCTGTAAAAGAGAAAGATTGGCGTTTCACAGAGAGCTGTGATAGGGATAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134261995 206 + 135778131 ATGATGTGTGGTGCATGGAAGGAGAAAAGGTGAATATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTGCAATACGGAGAGAAGGGCTCTTTAAT----CACGCTCTTCCCTGTAAAAGAGAAAGATCGGTGTTTCGCAGAGAGCTGGGATAGGGATAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695327 206 - 2847728 ATGACCTGTGGTGCACGGAAGGAGAAAAGGTGAGTATCTCCCCACACCAGACCTCCGAGGTTCATAAATTATTTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGCCAGTTTCCAGTACGGAGACAAGGACACTTTAAT----CACGCTCTTCCCTGTAAAAGAGAAAGATTGGCGTTTCACAGAGAGCTGTGATAGGGATAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821765 204 + 2368649 ATGATGTGTGGTGCACAGGAGGAGAAAAGGTGAATATCCCCCCACACCAAACCTCCGAGGCTCCTAAATTATCTATCACATAATTCAACGTGCTGCCCCA------------CTGGTCAGGGC--GTTTCCGATATGGAGACAAGGGCTCTTTATT----CACGCTCTTCCCTGTAAAAGAGAAAGATTGGCGTTTCACGGAGAGCTGTAATAGGGATAGGG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060000 205 - 14256875 ATGAACTGTGGTGCACAGGTGGAGAAAA-GTGAGTATCTCCCCAAACCAGACCTCTGAGGTTCATATATTATTTATAAAATACTTCAATGTGCTGCTGCGGTCCTCAGAGGTCTGGTCAGGACCAGTTTCTAATATGCGGACAAGAGCTCTTTAAT----CACATTCCTCCCTGCAAAAGAGAAAGATCGGTATTTAAC--AGAGCTAC----------AAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 948971 208 - 2196201 ATGAGGTGTGGTGCACAGGTGGAGAAAAGGTGAATATCTCCTCAAACCAGACCTCTGAGGTTCATAAATTATTTATAAAATACTTCAATGTGCTGCTGCAGTCCTCAGAGGTCTGGTCAGGACCAGTTTCTAATATGCAGACAAGAGCTCTTTAAT----CACATTCTTCCCTGCAAAAGAAAAAGACCGGCATTTAACAGAGAGCTGT----------AAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344708 208 - 5030052 ATGAGGTGTGGTGCGCAGGTGGAGAAAAGGTGAATAGCTCCCCAAACCAGACCTCTGAGGTTCATAAACTATTTGTAAAATACTTCAATGTGCTGCTGCGGTCCTCAGAGGTCTGGTCAGGACCAGTTTCTAATATGCAGACAAGAGCTCTTTAAT----CACATTCTTCCCTGCAAAAGAGAAAGATCGGCATTTAACAGAGAGCTAT----------AGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475301 199 - 93316391 ATGAGGTGTGGTGCTCAGACGGATAAAAGGTGAATATCTCCCCAAACCAGACCTC-GAGGTTCATAAATTATTTATAAAATACTTCAGTGTGCTGCTGCA------------GTGCTCAGGGCCAGTTTCTAATGTGGAGACAAGAGCTCTTTAATCACACACACTCTTCCCCTCAAAAGAAAAAGATTGGCATTTAACAGAGAGCTAT----------AAG i micMur3.chr14 I 191 I 145 s proCoq1.NW_012145301v1 3895866 199 + 3993831 ATGAGGTGTGGTGCTCAGACGGATAAAAGGTGAATATCTCCCCAAACCAGACCTC-GAGGTTCATAAATTATTTATAAAATACTTCAATGTGCTGCTGCA------------GTGCTCAGGGCCAGTTTCTAATGTGGAGACAAGAGATCTTTAATCACACACACTCTTCCCTTCAAAAGAAAAAGATTGGCATTTAACAGAGAGCTAT----------AAG i proCoq1.NW_012145301v1 I 187 C 0 s otoGar3.GL873580 11192013 198 - 11315646 ATGAGGTGTGGCGCTCAGATGGATAAAAGGTGAATATCTCCCCAAACCAGACCTT-GAGGTTCATAAATTATTTATAAAATACTTCAAAGCACGGCTGCA------------GTGCTCAGGGCTAGTTTCTAATGTGGAGACAAGAGCTTTTTAATCACACACACTCTTCCCCTCGAAAGAAAAAGA-TGGCATTTAACAGAGAGCCAT----------AAG i otoGar3.GL873580 C 0 I 6 s mm10.chr8 86521738 194 - 129401213 ATGAGGTGTGGCATGCAGATGGAGAACAGGTAAATATCTCCCTCAAACAGATCCCAGTGCGTCATAAATTATTTATAAAACCCTTCACTGTGCTGTTGTA------------GTGGTCAGAGTCAGCTACTAATACAGAGACAAGAGCTCTTTAAT----CACAATCTTTCCCTTTGCAG--AAAGATTGGCATCTAAGAGAGAGCTGT----------AAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16885243 199 - 59632846 ATGAGGTGTGGTACACAGATGGAGAAAAGGTGAGTATCTCCCAAAGCCAGACCTCCGAGGTTCATAAATTATTTATAAAATACTTCAGTGTGCTGCAGCAGCA---------GTGGTCAGGGCTGGTTTCTAATACGGTCGCAAGAGCTCTTTAAT----CACTCCCTTCCCCTCAACAGAAAAAGACTGGCGTTTAACAGAGAACTAT----------AAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392386 196 - 2520184 ATGAGGTGCGGTGTGCAGGTGGAGAAGAGGGGACTATCACCCAAAGCCAGGCCTCTGAGGTTCATAAATTATTTATAAAATACTTGAGTGTGCTGCTGCA------------GTGTCCAGGGCCAGTATCTAATACAGAGACAAGAGCTCTTTAAT----CACACCCTTCCCCTCGACTGAGAAAGATTGATATTTAACAGAGCGCCAC----------AAG i dasNov3.JH570353 C 0 I 6 e calJac3.chr3 189573892 187 - 190850796 I a score=69774.000000 s hg38.chr4_KI270789v1_alt 57658 6 + 205944 ACAGGA s panTro5.chr4 192848822 6 + 194502333 ACAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733072 6 + 195804263 ACAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769609 6 + 4876863 ACAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655146 6 + 115148730 ACAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938298 6 + 190429646 ATAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885759 6 + 189454096 ATAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263503 6 - 25927173 ATAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303141 6 + 4669795 ATAGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262201 6 + 135778131 ATAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695533 6 - 2847728 ATAGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821969 6 + 2368649 ATAGGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060205 6 - 14256875 ACAGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949179 6 - 2196201 GCAGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344916 6 - 5030052 ACAGGA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3896065 6 + 3993831 CCAGGA i proCoq1.NW_012145301v1 C 0 I 221 s otoGar3.GL873580 11192217 6 - 11315646 ACGGAA i otoGar3.GL873580 I 6 C 0 s mm10.chr8 86521932 6 - 129401213 GCAAAA i mm10.chr8 C 0 I 7 s canFam3.chr16 16885442 6 - 59632846 CCAAGA i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1392588 6 - 2520184 GCAGGG i dasNov3.JH570353 I 6 C 0 e calJac3.chr3 189573892 187 - 190850796 I e micMur3.chr14 17475500 145 - 93316391 I a score=831695.000000 s hg38.chr4_KI270789v1_alt 57664 98 + 205944 TAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTGGAATAGGAGTCGCTGGTCAGTTCTAGA---------------CCCAATGGCATGGACTTATGTAGTAATAGTAGTAAGAGT s panTro5.chr4 192848828 98 + 194502333 TAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGGACAGGAGTCGCTGGTCAGTTCTCGA---------------CTCAATCGCATGGACTTATGTAGTAATAGCAGTAACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733078 98 + 195804263 TAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGGACAGGAGTCGCTGGTCAGTTCTCGA---------------CTCAATCGCATGGACTTATGTAGTAATAGCAGTAACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769615 98 + 4876863 CAGG----GGTGTGACTGCA-G--GG--A--AACCTCCACTTAGAACAGGAGTCGCTGGTCAGTTCTAGA---------------CCCAATGGCATGGACTTATGTAGTAATAGCAGTAACAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655152 97 + 115148730 TAGG----GATGTGACCGCA-C--GG--A--AACCTCCACTTAGAATAGGAGTCGCTAATCAGTTCTAGA---------------C-CAATTGCTTGGACTTATGTAGTAATAGCAGTTATAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938304 98 + 190429646 GAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGAATAGGAGTTGCTCATCAGTTCTAGA---------------CCCAACTGCATGGACTTAGGCAGTAACAGCATTAACAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885765 98 + 189454096 GAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGAATAGGAGTTGCTCATCAGTTCTAGA---------------CCCAACTGCATGGACTTAGGCAGTAACAGCATTAACAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263509 99 - 25927173 GAGG----GATGTGACTGCAGG--GG--A--AACCTCCACTTAGAATAGGAGTTGCTCATCAGTTCTAGA---------------CCCAACTGCATGGACTTAGGCAGTAACAGCATTAACAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303147 98 + 4669795 GAGG----GATGTAACTGCA-G--GG--A--AACCTCCACTTAGAATAGGAGTTGCTCATCAGTTCCAGA---------------CCCAACTGCATGGACTTAGGTAGTAACAGCATTAAGAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262207 98 + 135778131 GAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGATTAGGAGTTGCTCATCAGTTCCAGA---------------CCCAACTGCATGGACTTAGGTAGTAGTAGCATTAACAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695539 98 - 2847728 GAGG----GATGTAACTGCA-G--GG--A--AACCTCCACTGAGAATAGGAGTTGCTCATCAGTTCCAGA---------------CCCAACTGCATGGACTTAGGTAGTAACAGCATTAACAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 821975 98 + 2368649 GAGG----GATGTGACTGCA-G--GG--A--AACCTCCACTTAGAATAGGAGTTGCTCATCAGTTCTAGA---------------CCCAACTGCATGGACATACATAGTAATAGCATTAACAGC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060211 113 - 14256875 AAGG----GATGTAACTGCA-G--GG--A--GATCTCCACTTAGAATACGAGCAGCTCATCAGTGATATAACTTGAGAGTGGCCCGCCAATTTCATGGACTTATACAGTCATAGCATTAACGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949185 113 - 2196201 CAGG----GATGTAACAGCA-G--GG--A--AAGCTCCACTTAGAAGAGGGGCAGCTCCTCAGTCATAGAACTTGGGAGTGGCCTCCCGATTCCATGGGCTTATGCAGTAATAGCAGTCACGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3344922 113 - 5030052 CAGG----GATGTAACTGCA-G--GG--A--AATCTCCACTTAGAATACGAGCTGCTCATCAGTTATAGAACTTGAGAATGGCCTGCCAATTTCATGGACTTATGCAGTAATAGCAATAATGGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11192223 99 - 11315646 TAGG----AG-----------G--GT--G--GATCTCCATTTGGAATGGGGGTT----ATCATTTATAGGCCTTGAGAGCTGACTGCCAATTTCACAAACCTATGCAGTAATAGCAATCATATC i otoGar3.GL873580 C 0 I 30 s mm10.chr8 86521945 114 - 129401213 AGTT----GTTGTGACTGCA-AATGG--A--AATAGAGA-TTAAAATACAAATTGTTTATCATTTACTGACCTTAAGCGATGACTGTCATTTTCATGAAACTGTGTCACAATAATCATGATATC i mm10.chr8 I 7 I 9 s canFam3.chr16 16885449 118 - 59632846 TAGGATACAGTATGACTATA-A--GGGTA--AATCTCCATTTAGAACAGGAGTCACTTATCATTTATAGACCTTGAGAGCTGACGGCCGATT-TATGCACCTACATAGTAAGAGCAATGACATC i canFam3.chr16 I 1 I 30 s dasNov3.JH570353 1392594 115 - 2520184 GATG----AGTGTGACTGCC-A--GG--ATGAATCTCCGTTTATAACAGGAGCTGCTTCTCGTTTACTGACCTTGAGAGGGGACCGCAAATTTCACGAACCTACGCAGAAATAGCAGTGACAAT i dasNov3.JH570353 C 0 I 31 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3896071 221 + 3993831 I e micMur3.chr14 17475500 145 - 93316391 I a score=546980.000000 s hg38.chr4_KI270789v1_alt 57762 52 + 205944 TCCTGA--AGATAGTTTCAATCTATTGCCAGCATTCTGTAGGTCTTTATAACAA s panTro5.chr4 192848926 52 + 194502333 TCCTGA--AGATAGTTTCAATCTATTGCCAGCATTCTGTAGGTCTTTATAACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733176 52 + 195804263 TCCTGA--AGATAGTTTCAATCTATTGCCAGCATTCTGTAGGTCTTTATAACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769713 52 + 4876863 TCCTGA--AGATAGTTTCAATCTATCGCCAGCATTCTGAAGGTCTTTATAACAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655249 51 + 115148730 TCCTGA--AGATAGTTTCAATCTATTGCCAGC-CTCTGCAGGTTTTTATAACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938402 50 + 190429646 TCCTGA--AG--AGTTTGCCTCTATCACCAGCCTTGTGTGGGTCTTTATAACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885863 50 + 189454096 TCCTGA--AG--AGTTTGCCTCTGTCACCAGCCTTGTGTGGGTCTTTATAACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263608 50 - 25927173 TCCTGA--AG--AGTTTGCCTCTATCACCAGCCTTGTGTGGGTCTTTATAACAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303245 50 + 4669795 TCCTGA--AG--AGTTTGCCTCTATCACCAGCCTTGTGTGGGTCTTTATAACAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262305 50 + 135778131 TCCAGA--AG--AGTTTCTGTCTATCACCAGCCTTGTGTAGGTCTTTATAACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695637 50 - 2847728 TCCTGA--AG--AGTTTGCCTCTATCACCAGCCTTGTGTGGGTCTTTATAACAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822073 51 + 2368649 TCCTGAAGAG--AGTTTGCATCTATCACCAGCC-TGTGTAGGTCTTTATAAGAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060324 52 - 14256875 TCCTGA--AAATAGTTTCCATCTAATACCAGCTTTCTGTAGATGTTTATAACAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949298 52 - 2196201 TCCTGA--AAATAGTTTCCATCTAATACCAGCTTTCTGTGGATCTTTATAACAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345035 52 - 5030052 TCCTGA--AAATAGTTTCCATCTAATACCAGCTTTCTGTAGATCTTTGTAACAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475645 52 - 93316391 TCCTGA--AAATAGTTTCGATATATTACCAGCATTTTATAGATCTTCATAACAA i micMur3.chr14 I 145 I 30 s otoGar3.GL873580 11192352 52 - 11315646 TCCTGA--AAATAGTTTCAACCTATTACCAGCATTTTATAGATATTCATAACAA i otoGar3.GL873580 I 30 I 3 s mm10.chr8 86522068 52 - 129401213 TCCTGA--AAATAGTCCCAATCCAATTCTAGTATCTTATAGATCTTCGTAAGAA i mm10.chr8 I 9 I 3 s canFam3.chr16 16885597 52 - 59632846 TCCTGA--AAATAGTTTTAATCTATTACCAGCCCTTTATAGATTTTTAAAACAA i canFam3.chr16 I 30 I 3 s dasNov3.JH570353 1392740 51 - 2520184 TCTTGA--AA-TCGTTTTAATTTATCATTAGATATTTATAGGTCTTTATAACAA i dasNov3.JH570353 I 31 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3896071 221 + 3993831 I a score=224225.000000 s hg38.chr4_KI270789v1_alt 57814 24 + 205944 GCAGGAAATGG-ATACACA-TGTCTC-- s panTro5.chr4 192848978 24 + 194502333 GCAGGAAATGG-ATACACA-TGTCTC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733228 24 + 195804263 GCAGGAAATGG-ATACACA-TGTCTC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769765 24 + 4876863 GCAGGAAATGG-ATACACA-TGTCTC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655300 24 + 115148730 GCAGGAAATTG-ATACACA-TGTCTC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938452 24 + 190429646 GCAGGACATGG-ATACACA-TGTCTC-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885913 24 + 189454096 GCAGGACATGG-ATACACA-TGTCTC-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263658 24 - 25927173 GCAGGACATGG-ATACACA-TGTCTC-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303295 24 + 4669795 GCAGGACGTGG-ATACACA-TGTCTC-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262355 24 + 135778131 GCAGGACATGG-ATACACA-TGTCTC-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695687 24 - 2847728 GCAGGACGTGG-ATACACA-TGTCTC-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822124 24 + 2368649 GCAGGACGTGG-ATACACA-TGTCTC-- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060376 24 - 14256875 GCAGAAAATGA-ATACACA-TGTCTC-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949350 24 - 2196201 GCAGGAAATGA-ATACGCA-TTTCTC-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345087 24 - 5030052 GCAGGAAATGA-ATACACA-TGTCTC-- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11192407 22 - 11315646 GTAGAAAATGG---GCACA-TGCTAT-- i otoGar3.GL873580 I 3 I 5 s mm10.chr8 86522123 22 - 129401213 GCA-CAAATAA-ACACACACTGTC---- i mm10.chr8 I 3 C 0 s canFam3.chr16 16885652 25 - 59632846 GTAGAAAATGG-GCATACACTATCTC-- i canFam3.chr16 I 3 I 2 s dasNov3.JH570353 1392791 26 - 2520184 GTAGAAATAGGCATGCACA--ATCTCTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3896071 221 + 3993831 I e micMur3.chr14 17475697 30 - 93316391 I a score=796350.000000 s hg38.chr4_KI270789v1_alt 57838 56 + 205944 TGTTCCATAATTAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA s panTro5.chr4 192849002 56 + 194502333 TGTTCCATAATTAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733252 56 + 195804263 TGTTCCATAATTAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769789 56 + 4876863 TGTTCCATAATTAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655324 56 + 115148730 TGTTCCATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938476 56 + 190429646 TGTTTCATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATACGTAAGTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885937 56 + 189454096 TGTTTCATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATAGGTAAGTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263682 56 - 25927173 TGTTTCATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303319 56 + 4669795 TGTTTCATAATCAGAAAAGTACCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262379 55 + 135778131 TGTTT-ATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695711 56 - 2847728 TGTTTCATAATCAGAAAAGTATCACCATTTTCCTGGGACAAAAATATGTAAGTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822148 56 + 2368649 TGTTTCATAATCAGAAAAGTATCACTATTTTCCTGGGACAAAAATATGTAAGTTTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060400 56 - 14256875 TGTTCCATAATCAGAAAAGTACTACCATTTTCCTAGGACAAAAATATATAAGTTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949374 56 - 2196201 TGTTCCATAATCAGAAAAGTATCAGCATTTTCCTAGGACAAAAATATGTAAGTTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345111 56 - 5030052 TGTTCCATAATCAGAAAAGTACCACCGTTTTCCTAGGATAAAAACATGTAAGTTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475727 56 - 93316391 TGTTCCATAATCAGAAAACTGTCACCGTTTTCCTGGGACAAAAATATGTAAGTTTA i micMur3.chr14 I 30 C 0 s proCoq1.NW_012145301v1 3896292 56 + 3993831 TGTTCCATAATCAGAAAACTGTCAACATTTTCCTGAGACAAAAATATGTAAGTTTA i proCoq1.NW_012145301v1 I 221 C 0 s otoGar3.GL873580 11192434 56 - 11315646 GGCTCCCTCTTCAGAAAACTGTCACCGTTTTCCTGGGACAAAGATAGGTAAGTTTA i otoGar3.GL873580 I 5 C 0 s mm10.chr8 86522145 54 - 129401213 TGCTCCCTATTAAGAAAGCTATCATCACCTCACAGAGATAA--ATAAGTATATTTA i mm10.chr8 C 0 I 354 s canFam3.chr16 16885679 54 - 59632846 TGTTCCACA-TCAGAATACCATCAGCATTTTCCTGGGTCAAAAATATGTACGTTA- i canFam3.chr16 I 2 I 1 s dasNov3.JH570353 1392817 53 - 2520184 TATTTCATAA-CAGGAAATGATGATGACTTTCCTGGGACAAA-ATATATAATTTG- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=74377.000000 s hg38.chr4_KI270789v1_alt 57894 8 + 205944 AACATTTT s panTro5.chr4 192849058 8 + 194502333 AACACTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733308 8 + 195804263 AACACTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769845 8 + 4876863 AACATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655380 8 + 115148730 AAGATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938532 8 + 190429646 AACATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187885993 8 + 189454096 AACATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263738 8 - 25927173 AACATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303375 8 + 4669795 AACATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262434 8 + 135778131 AACATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695767 8 - 2847728 AACATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822204 8 + 2368649 AACATTTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060456 8 - 14256875 AACTTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949430 8 - 2196201 AACATTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345167 8 - 5030052 AACATTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475783 7 - 93316391 AAAA-TTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3896348 7 + 3993831 AAAA-TTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11192490 7 - 11315646 AAAA-TTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16885734 7 - 59632846 AAAATTT- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1392870 8 - 2520184 GAAATTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e mm10.chr8 86522199 354 - 129401213 I a score=623039.000000 s hg38.chr4_KI270789v1_alt 57902 40 + 205944 TAGTGCCAGGTCAGTAGTCACGATTTACCAACAGCATTTT s panTro5.chr4 192849066 40 + 194502333 TAGTGCCAGGTCAGTAGTCACGATTTACCAACAGCATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733316 40 + 195804263 TAGTGCCAGGTCAGTAGTCACGATTTACCAACAGCATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769853 40 + 4876863 TAGTGCCAGGTCAGTAGTCACGATTTACCAACAGCATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655388 39 + 115148730 T-GTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938540 40 + 190429646 TAGTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886001 40 + 189454096 TAGTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263746 40 - 25927173 TAGTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303383 40 + 4669795 TAGTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262442 40 + 135778131 TAGTGCCAGCTCAGTAGTCACAACTTACCAATAGCATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695775 40 - 2847728 TAGTGCCAGGTCAGTAGTCGCAACTTACCAATAGCATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822212 40 + 2368649 TAGTGCCAGGTCAGTAGTCACAACTTACCAATAGCATTTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060464 40 - 14256875 TAGTGCCAGGTCAGCAGTCACAATTTACCAGCAGCATTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949438 40 - 2196201 TAGTGCCAGGTCAGCAGTCACAATTTACCAGTAGCATTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345175 40 - 5030052 TAGTGCCAGGTCAGCAGTCACAATTTACCAGTGGCATTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475790 40 - 93316391 TAGTGCCAGGCCCATAGTCACAATTTACCAATATCATTTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3896355 40 + 3993831 TAGTGCTAGGCCTGTAATCACAATTTACCAATAGCATTTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11192497 40 - 11315646 TAGTGTGAGCCCAGAAGGTACAATTTATCAATAACATTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522553 40 - 129401213 TAGTGCTAGGCTAGTAGTCATAATATATCAATAGCACTTT i mm10.chr8 I 354 C 0 s canFam3.chr16 16885741 40 - 59632846 TAGTGCCAAGCTAGTAGTCAGAATTTACCAATAACATCtt i canFam3.chr16 C 0 I 190 s dasNov3.JH570353 1392878 40 - 2520184 TAGTGCCAGGCTAGTGGTCAGAACTTCCCAATAGTGTTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=153695.000000 s hg38.chr4_KI270789v1_alt 57942 15 + 205944 --------TTATTTTAAAAATAC s panTro5.chr4 192849106 15 + 194502333 --------TTATTTTAAAAATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733356 15 + 195804263 --------TTATTTTAAAAATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769893 15 + 4876863 --------TTATTTTAAAAATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655427 15 + 115148730 --------TTATTTTAAAAATAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938580 15 + 190429646 --------TTATTTTAAAAATAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886041 15 + 189454096 --------TTATTTTAAAAATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263786 15 - 25927173 --------TTATTTTAAAAATAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303423 15 + 4669795 --------TTATTTTAAAAATAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262482 15 + 135778131 --------TTATTTTAAAAATAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695815 15 - 2847728 --------TTATTTTAAAAATAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822252 15 + 2368649 --------TTATTTTAAAAACAC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060504 15 - 14256875 --------TAGATTTGAAAACAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949478 15 - 2196201 --------TAAATTTGAAAACAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345215 15 - 5030052 --------TAAATTTGAAAACAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475830 15 - 93316391 --------TAAATTTAAAAATAC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3896395 15 + 3993831 --------TAAATTTAAAaatac i proCoq1.NW_012145301v1 C 0 I 2195 s otoGar3.GL873580 11192537 15 - 11315646 --------GAAATTTTAAAATAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522593 14 - 129401213 --------TAATTAAACAATTT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16885971 15 - 59632846 --------atatttaaaaaaTTC i canFam3.chr16 I 190 C 0 s dasNov3.JH570353 1392918 23 - 2520184 AAAATTTGACACTCAAAAAATGT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I a score=464171.000000 s hg38.chr4_KI270789v1_alt 57957 38 + 205944 AGTTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT s panTro5.chr4 192849121 38 + 194502333 AGTTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733371 38 + 195804263 AGTTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769908 38 + 4876863 AGTTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655442 38 + 115148730 AGTTAGTGACTACA-C---CATTGGCGAACAAACTGAGACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938595 38 + 190429646 AGCTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886056 38 + 189454096 AGCTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263801 38 - 25927173 AGCTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303438 38 + 4669795 AGCTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262497 38 + 135778131 AGTTAGTGATTACA-C---CATTGGCTAACAAACTGAGACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695830 38 - 2847728 AGCTAGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822267 34 + 2368649 ----AGTGACTACA-C---CATTGGCTAACAAACTGAGACTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060519 38 - 14256875 AGTTAGTGACTACA-C---CATTGGCTAACAAATTAAGACTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 949493 38 - 2196201 AGTTAGTGACTACA-C---CATTGGCTAAGAAATTAAGACTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345230 38 - 5030052 AGGTAGTGACTACA-C---CATTGGCTAACAAATTAAGACTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475845 38 - 93316391 CTTCGGTGAATATA-T---CATTAGCTAATAAACTGATACTC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11192552 37 - 11315646 CGTTAGTGATTATG-C---CATTGGCTAAT-AACTGATACTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522607 41 - 129401213 AGTCAGCAACTACA-CTGTTATTGGCTAATGAGCACAGACTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16885986 38 - 59632846 AATGAAAGATTATA-C---CATTGTCTAAGAAACTGAGACTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1392941 39 - 2520184 CATGAATGATATTATC---CATAGAATAATAAACCGAGATAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189573892 187 - 190850796 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I a score=106746.000000 s hg38.chr4_KI270789v1_alt 57995 10 + 205944 AAAGCATTC----T s panTro5.chr4 192849159 10 + 194502333 AAAGCATTC----T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733409 10 + 195804263 AAAGCATTC----T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769946 10 + 4876863 AAAGCATTC----T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655480 3 + 115148730 AAA----------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938633 10 + 190429646 AAAGCATTT----T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886094 10 + 189454096 AAAGCATTT----T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263839 10 - 25927173 AAAGCATTT----T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303476 10 + 4669795 AAAGCATTT----T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262535 10 + 135778131 AAAGCATTC----T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695868 10 - 2847728 AAAGCATTT----T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822301 10 + 2368649 AAAGCATTC----T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574079 10 - 190850796 aaaGCATTC----T i calJac3.chr3 I 187 C 0 s saiBol1.JH378165 13060557 10 - 14256875 AAAGCATTC----T i saiBol1.JH378165 C 0 I 298 s cebCap1.NW_016107886v1 949531 10 - 2196201 AAAGCGTTC----T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3345268 10 - 5030052 AAAGCATTC----T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17475883 10 - 93316391 AAAGCATTC----T i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11192589 14 - 11315646 AAAACATTTAGTAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522648 9 - 129401213 -AACAAATC----T i mm10.chr8 C 0 I 1 s canFam3.chr16 16886024 10 - 59632846 AAAAGGCTC----T i canFam3.chr16 C 0 I 5 s dasNov3.JH570353 1392980 10 - 2520184 AAAATACTC----T i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I a score=16511.000000 s hg38.chr4_KI270789v1_alt 58005 1 + 205944 C s panTro5.chr4 192849169 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733419 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769956 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188938643 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886104 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263849 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303486 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262545 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695878 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822311 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574089 1 - 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13060865 1 - 14256875 C i saiBol1.JH378165 I 298 C 0 s cebCap1.NW_016107886v1 949541 1 - 2196201 C i cebCap1.NW_016107886v1 C 0 I 619 s aotNan1.NW_018492112v1 3345278 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 I 990 s micMur3.chr14 17475893 1 - 93316391 C i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11192603 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522658 1 - 129401213 C i mm10.chr8 I 1 C 0 s canFam3.chr16 16886039 1 - 59632846 C i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1392990 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e nomLeu3.chr7b 112655483 0 + 115148730 C a score=43146.000000 s hg38.chr4_KI270789v1_alt 58006 3 + 205944 TAG s panTro5.chr4 192849170 3 + 194502333 TAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733420 3 + 195804263 TAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769957 3 + 4876863 TAG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188938644 3 + 190429646 TAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886105 3 + 189454096 TAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263850 3 - 25927173 TAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303487 3 + 4669795 TAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262546 3 + 135778131 TAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695879 3 - 2847728 TAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822312 3 + 2368649 TAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574090 3 - 190850796 TAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13060866 3 - 14256875 TAG i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17475894 3 - 93316391 TAG i micMur3.chr14 C 0 I 1377 s otoGar3.GL873580 11192604 3 - 11315646 TAG i otoGar3.GL873580 C 0 I 18 s mm10.chr8 86522659 3 - 129401213 TAG i mm10.chr8 C 0 I 15 s canFam3.chr16 16886040 3 - 59632846 TAG i canFam3.chr16 C 0 I 10 s dasNov3.JH570353 1392991 3 - 2520184 TAG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 949542 619 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e aotNan1.NW_018492112v1 3345279 990 - 5030052 I e nomLeu3.chr7b 112655483 0 + 115148730 C a score=112163.000000 s hg38.chr4_KI270789v1_alt 58009 21 + 205944 -------------------------ATGCAAAT---------G-CTACAAATAAAT s panTro5.chr4 192849173 21 + 194502333 -------------------------ATGCAGAT---------G-CTACAAATAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733423 21 + 195804263 -------------------------ATGCAGAT---------G-CTACAAATAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769960 21 + 4876863 -------------------------ATGCAAAT---------G-CTACAAATAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655483 19 + 115148730 ---------------------------GCAAAT---------G-CTACAAATAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938647 17 + 190429646 -------------------------ATGCAAAT---------G-CTATAAAT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886108 17 + 189454096 -------------------------ATGCAAAT---------G-CTATAAAT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263853 17 - 25927173 -------------------------ATGCAAAT---------G-CTATAAAT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303490 17 + 4669795 -------------------------ATGCAAAT---------G-CTATAAAT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262549 21 + 135778131 -------------------------ATGCAAAT---------G-CTATAAATACAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695882 17 - 2847728 -------------------------ACGCAAAT---------G-CTATAAAT---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822315 21 + 2368649 -------------------------ATGCAAAT---------G-CTATAAATAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574093 21 - 190850796 -------------------------ATGCAAAT---------G-CTATAAGTAAAT i calJac3.chr3 C 0 I 626 s saiBol1.JH378165 13060869 21 - 14256875 -------------------------ATGTAAAT---------G-CTATAAATAAAT i saiBol1.JH378165 C 0 I 1 s otoGar3.GL873580 11192625 21 - 11315646 -------------------------ATGCAGAT---------G-CTGTTAGTAACT i otoGar3.GL873580 I 18 C 0 s mm10.chr8 86522677 29 - 129401213 -------------------------ATGGAAATTATGAGATAG-CCATAAGTAAC- i mm10.chr8 I 15 C 0 s canFam3.chr16 16886053 20 - 59632846 -------------------------ATCCAAAT-----------CTGCAGATAGGT i canFam3.chr16 I 10 C 0 s dasNov3.JH570353 1392994 46 - 2520184 AATCAAGATGTTTCCTGATCTAAATATACAGAA---------GTCCataaataat- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 949542 619 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e aotNan1.NW_018492112v1 3345279 990 - 5030052 I a score=202987.000000 s hg38.chr4_KI270789v1_alt 58030 33 + 205944 ----------CAAATTATT--------------------------------------AGGCATATTCACTAATACTTACAA s panTro5.chr4 192849194 33 + 194502333 ----------CAAATTATT--------------------------------------AGGCATATTCACTAATACTTACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733444 33 + 195804263 ----------CAAATTATT--------------------------------------AGGCATATTCACTAATACTTACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3769981 33 + 4876863 ----------CAAATTATT--------------------------------------AGGTATATTCACTAATATTTACAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655502 33 + 115148730 ----------CAAATTATT--------------------------------------AGGTATATTCACTAATATGTACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938664 32 + 190429646 -----------AAATTATT--------------------------------------AGGTGTGTTCACTAATATTTACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886125 32 + 189454096 -----------AAATTATT--------------------------------------AGGTATGTTCACTAATATTTACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263870 32 - 25927173 -----------AAATTATT--------------------------------------AGGTATGTTCACTAATATTTACAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303507 31 + 4669795 -----------AAATGATT--------------------------------------AGGTATGTTCACTAATATTTACA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262570 33 + 135778131 ----------CAAATTATT--------------------------------------AGGTATGTTCACTAATATTTACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695899 32 - 2847728 -----------AAATTATT--------------------------------------AGGTATGTTCACTAATATTTACAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822336 33 + 2368649 ----------CAAACTATT--------------------------------------AGGTATATTCACTAATATTTACAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13060891 71 - 14256875 ----------CCACTTATTTATTTATTTTATTTAGAGTCAGAGTCTCTCTCTCTGTGAAATGTATTCACTAATATTTACAA i saiBol1.JH378165 I 1 C 0 s otoGar3.GL873580 11192646 16 - 11315646 -----------AAATTATT--------------------------------------AATTATCT---------------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522706 30 - 129401213 ----------AAAATTATT--------------------------------------AAATTTAT---GTGATATTTATAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16886073 32 - 59632846 -----------GAATTATT--------------------------------------ATTCATGTTCTCTAATATTTACAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1393040 43 - 2520184 caaattattaaaaattatt--------------------------------------atttatattCCCCAATATTTACAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189574114 626 - 190850796 I e cebCap1.NW_016107886v1 949542 619 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e aotNan1.NW_018492112v1 3345279 990 - 5030052 I a score=58634.000000 s hg38.chr4_KI270789v1_alt 58063 5 + 205944 ACTTA s panTro5.chr4 192849227 5 + 194502333 ACTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733477 5 + 195804263 ACTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770014 5 + 4876863 ACTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655535 5 + 115148730 ACTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938696 5 + 190429646 ACTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886157 5 + 189454096 ACTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263902 5 - 25927173 ACTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303538 1 + 4669795 ----A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262603 5 + 135778131 ACTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695931 5 - 2847728 ACTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822369 5 + 2368649 ACTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574740 5 - 190850796 ACTTA i calJac3.chr3 I 626 C 0 s saiBol1.JH378165 13060962 5 - 14256875 ACTTA i saiBol1.JH378165 C 0 I 1286 s aotNan1.NW_018492112v1 3346269 5 - 5030052 ACTTA i aotNan1.NW_018492112v1 I 990 C 0 s otoGar3.GL873580 11192662 5 - 11315646 GCTTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86522736 5 - 129401213 AGTTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16886105 5 - 59632846 ACTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1393083 5 - 2520184 ATTTA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 949542 619 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I a score=2005.000000 s hg38.chr4_KI270789v1_alt 58068 1 + 205944 -A s panTro5.chr4 192849232 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733482 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770019 1 + 4876863 -A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655540 1 + 115148730 -T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938701 1 + 190429646 -A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886162 1 + 189454096 -A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263907 1 - 25927173 -A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303539 1 + 4669795 -A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262608 1 + 135778131 -A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695936 1 - 2847728 -A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822374 1 + 2368649 -A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574745 1 - 190850796 -A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062253 1 - 14256875 -A i saiBol1.JH378165 I 1286 C 0 s aotNan1.NW_018492112v1 3346274 1 - 5030052 -A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11192667 1 - 11315646 -A i otoGar3.GL873580 C 0 I 2 s mm10.chr8 86522741 1 - 129401213 -A i mm10.chr8 C 0 C 0 s canFam3.chr16 16886110 1 - 59632846 -A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1393088 1 - 2520184 T- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 949542 619 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I a score=435974.000000 s hg38.chr4_KI270789v1_alt 58069 39 + 205944 CTTCATATATAAAGCAAGGTAGATCAC--------CAGTGTGGCCAT s panTro5.chr4 192849233 39 + 194502333 CTTCATATATAAAGCAAGGTAGATCAC--------CAGTGAGGCCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733483 39 + 195804263 CTTCATATATAAAGCAAGGTAGATCAC--------CAGTGAGGCCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770020 39 + 4876863 CTTCATATATAAAGCAAGGTAGATCAC--------CAGTGTGGCCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655541 39 + 115148730 CTTCATACATAAAGCAAGGTAGATCAC--------CAGTGTGGCCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938702 39 + 190429646 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886163 39 + 189454096 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263908 39 - 25927173 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303540 39 + 4669795 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262609 47 + 135778131 CTTCATATATAAAGCAAGGGAAATCGCCAGTGTGGCAGTGTGGCCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695937 39 - 2847728 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822375 39 + 2368649 CTTCATATATAAAGCAAGGTAAATCAC--------CAGTGTGGCCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574746 38 - 190850796 CTTCGTAAATAAAGCAAGGTT-CTCAC--------CAGCGGGGCGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062254 39 - 14256875 CTTCATGTATAAAGCAAGGTTCCTCCC--------CAGTGGGGCCGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950161 39 - 2196201 CTTCATGTATAAAGCGAGGTGCCTCAC--------CAGTGGAGCCAT i cebCap1.NW_016107886v1 I 619 C 0 s aotNan1.NW_018492112v1 3346275 39 - 5030052 CTTCATATATAAAGCAAGGTTCCTCAC--------CAGTGGGGCCAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11192670 38 - 11315646 CCTC-TATATAAAACAAGTTAAATTAT--------CAGTGTGGCCAT i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86522742 39 - 129401213 ATCCCTATTTAAAAACTGTTCAGTTAC--------ATGTGTAGTCAT i mm10.chr8 C 0 I 2772 s canFam3.chr16 16886111 38 - 59632846 -TTTCTTTATAAAACAAGTTAAATTAT--------CAGTGTGGTCAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1393089 36 - 2520184 --TTCTATTTAAA-CATGCAAAATTAT--------CAGTGTTGCTGT i dasNov3.JH570353 C 0 I 1131 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I a score=24857.000000 s hg38.chr4_KI270789v1_alt 58108 2 + 205944 Gc s panTro5.chr4 192849272 2 + 194502333 GC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733522 2 + 195804263 GC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770059 2 + 4876863 Gc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655580 2 + 115148730 Gc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938741 2 + 190429646 Gc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886202 2 + 189454096 Gc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263947 2 - 25927173 Gc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303579 2 + 4669795 Gc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262656 2 + 135778131 Gc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695976 2 - 2847728 Gc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822414 2 + 2368649 Gc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574784 2 - 190850796 GC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062293 2 - 14256875 GA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950200 2 - 2196201 GC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3346314 2 - 5030052 GT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11192708 2 - 11315646 GC i otoGar3.GL873580 C 0 I 3281 s canFam3.chr16 16886149 2 - 59632846 GC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e mm10.chr8 86522781 2772 - 129401213 I a score=232103.000000 s hg38.chr4_KI270789v1_alt 58110 28 + 205944 aaacagggtttgaggacttcaatattta s panTro5.chr4 192849274 27 + 194502333 -aacagggtttgaggacttcaatattta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733524 27 + 195804263 -aacagggtttaaggacttcaatattta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770061 28 + 4876863 aaacagggtttgaggacttcaatattta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655582 28 + 115148730 aaacagggtgtgaggactgcaatattta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938743 28 + 190429646 aaacagggtttgaggactcccatattta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886204 28 + 189454096 aaacagggtttgaggattcccatattta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263949 28 - 25927173 aaacagggtttgaggactcccatattta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303581 28 + 4669795 aaacagggtttgaggactccagtattta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262658 28 + 135778131 agacagggtttgaggacttcagtattta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2695978 28 - 2847728 aaacagggtttgaggactccagtattta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822416 28 + 2368649 aaacagggtttgaggactttggtattta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574786 28 - 190850796 CAAGCGGGTTTGAGGACTTCAACGTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062295 28 - 14256875 Gaagagggtttgaggacttcagcattta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950202 27 - 2196201 Caggagggtttgc-gacttcaacattta i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3346316 28 - 5030052 Gaaggggggttgaggacttcaacattta i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16886151 20 - 59632846 ---CATAGTT-----AATACAATATTTA i canFam3.chr16 C 0 I 1601 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=947433.000000 s hg38.chr4_KI270789v1_alt 58138 106 + 205944 aagcaagttagtccaacccacag-cccaagggccacatgcagcccaggatggctttgaatgaggcccaacacaaattagcaaattactaaacttacttaaaatgatg s panTro5.chr4 192849301 106 + 194502333 aagcaagctagtccaacccacag-cccaagggccgcatgcagcccaggatggctttgaatgaggcccaacacaaattagcaaattactaaacttacttaaaataatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733551 106 + 195804263 aagcaagctagtccaacccacag-cccaagggccgcatgcagcccaggatggctttgaatgaggcccaacacaaattagcaaattactaaacttacttaaaataatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770089 105 + 4876863 aagcaagctagtccaa-ccacag-cccaagggccacatgcagcccaggatggctttgaatgaggcccaacacaaattagcaaattactaaacttacttaaaatgatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655610 106 + 115148730 aagcaagtttggccaacccacgg-ctcatgggcggcatgcagcccaggctggctttgaatgaggcccaacacaaattagcaaattagtaaacttgcttaaaatgatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938771 104 + 190429646 cagcaagcttgtccaacccacag-cccatgggccgcatgcagcc--ggatggctttgagagaggcccaacacaaattagcaaattagtaaacttacttaaaatgatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886232 104 + 189454096 cagcaagcttgtccaacccacag-cccatgggccgcatgcagcc--ggatggctttgagagaggcccaacacaaattagcaaattagtaaacttacttaaaatgatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24263977 104 - 25927173 cagcaagcttgtccaacccacag-cccatgggccgcatgcagcc--ggatggctttgagagaggcccaacacaaattagcaaattagtaaacttacttaaaatgatg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303609 104 + 4669795 cagcaagctagtccaacccacag-cccatgggccgcatgcagcc--ggatggctttgagagaggcccaacacaaattagcaaattagtaaacttacttaaaatgatg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262686 106 + 135778131 cagcgagcttgtccaacccccag-cccgtgggccacgtgcagcctgggatggctttgaaagaggcccaacataaattagcaaattagtaaacttacttaaaatgatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696006 104 - 2847728 cagcaagctagtccaacccacag-cccatgggccgcacgcagcc--ggatggctttgagagaggcccaacacaaattagcaaattagtaaactcacttaaaatgatg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822444 106 + 2368649 cagcaagcttgtccaacccacag-cccatgggtcacacgcagccggggatggctttgaaagaggcccaacacaaattagcaaattagtaaacttacttaaaatgatg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574814 107 - 190850796 AAGcaagcttgtccgacccacagccccacgggcctcaggaagcccaggatggctttgaatgaggcccaacgccgattagcaaattgggaaacttacttaaaatgatg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062323 106 - 14256875 aagcaagcttgtccagcccacag-cccatgggcctcaggaagcccaggaccactttgaaggaggcccagctggaattagccaattagtaaactgacttaaaatgatg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950229 106 - 2196201 aggcaagcttgtccaacccatag-accgtgggcctcaggcagcccagggtggctttgaatgaggcccaacaggaattggcaaattagtaaacgtacttaaaatgatg i cebCap1.NW_016107886v1 C 0 I 28 s aotNan1.NW_018492112v1 3346344 106 - 5030052 aagcaagcttgtccaacccacag-cccgtgggcctcaggaagcccaggatggctttgaatgaggcccaacacgaattagcaaatcagtaaacttacttaaaatggtg i aotNan1.NW_018492112v1 C 0 I 36 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=37806.000000 s hg38.chr4_KI270789v1_alt 58244 32 + 205944 ggatttta-------------t-------tt---tttgccattttttggtttgtg s panTro5.chr4 192849407 32 + 194502333 ggatttta-------------t-------tt---tttgccattttttggtttgtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733657 32 + 195804263 ggatttta-------------t-------tt---tttgccattttttggtttgtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770194 32 + 4876863 ggatttta-------------t-------tt---tttgccattttttggtttgtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655716 28 + 115148730 ggat-----------------t-------tt---tttgcgaatttttggttggtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938875 43 + 190429646 ggatttttaaaatttaaatt-ttta----tt---tttgccattttttgctt---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886336 43 + 189454096 ggattttttaaatttaaatt-ttta----tt---tttgccattttttgctt---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264081 43 - 25927173 ggattttttaaatttaaatt-ttta----tt---tttgccattttttgctt---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303713 43 + 4669795 ggattttttaaattttaatt-ttta----tt---tttgccattttttgctt---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262792 43 + 135778131 ggattttt----ttttattt-tttaattttt---tttgccgttttttgctt---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696110 43 - 2847728 ggattttttaaattttaatt-ttta----tt---tctgccgttttttgctt---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822550 44 + 2368649 ggatttat----ttttatttatttatgtttt---tttgccattttttgctt---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574921 21 - 190850796 ---------------------------gtttttgtgtgtgtgtgtgtg------- i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13062429 18 - 14256875 ---------------------------cttt---tgtgtgtgcgtgtg------- i saiBol1.JH378165 C 0 I 3 e cebCap1.NW_016107886v1 950335 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3346450 36 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=24037.000000 s hg38.chr4_KI270789v1_alt 58276 3 + 205944 tgt s panTro5.chr4 192849439 3 + 194502333 tgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733689 3 + 195804263 tgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770226 3 + 4876863 tgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655744 3 + 115148730 tgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938918 3 + 190429646 tgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886379 3 + 189454096 tgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264124 3 - 25927173 tgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303756 3 + 4669795 tgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262835 3 + 135778131 tgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696153 3 - 2847728 tgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822594 3 + 2368649 tgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574945 3 - 190850796 ttt i calJac3.chr3 I 3 C 0 s saiBol1.JH378165 13062450 3 - 14256875 ttt i saiBol1.JH378165 I 3 C 0 s aotNan1.NW_018492112v1 3346486 3 - 5030052 tgt i aotNan1.NW_018492112v1 I 36 C 0 e cebCap1.NW_016107886v1 950335 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1291049.000000 s hg38.chr4_KI270789v1_alt 58279 156 + 205944 ttggtttttagctcatcagctttgttagtgttagtgtattttatgtgtggcccaagacaatacttccaatgt-ggcccagggaagccaaaagattggacactcctgatttaaaggg-aaaagggagggcagatgaagaa--ag--agga-taaaaaaaagaga----- s panTro5.chr4 192849442 157 + 194502333 ttggtttttagctcatcagctttgttagtgttagtgtattttatgtgtggcccaagacaattcttccaatgt-ggcccagggaagccaaaagattggacactcctgatttaaagggaaaaagggagggcagatgaagaa--ag--agga-taaaaaaaagaga----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733692 157 + 195804263 ttggtttttagctcatcagctttgttagtgttagtgtattttatgtgtggcccaagacaattcttccaatgt-ggcccagggaagccaaaagattggacacttctgatttaaagggaaaaagggagggcagatgaagaa--ag--agga-taaaaaaaagaga----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770229 157 + 4876863 ttggtttttatctcatcagctttgttagtgttagtgtattttatgtgtggcccaagacaattcttccaatgt-ggcccagggaagccaaaagattggacactcctgatttaaagggaaaaagggagggcagatgaagaa--ag--agga-taaaaaaaagaga----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655747 158 + 115148730 ttggtttttagctcatcagctttgttagtgttagtgtatcttatgtgtggcccaagacaattcttccaatgt-ggcccagggaagccaaaaggttggacactcctgatttaaagggaaaaagggagggcagatgaggaa--ag--aggattaaaaaaaagaga----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188938921 146 + 190429646 ttggtttttagctcatcagctt------tgttagtgtattttatgtgtgacccaagacaattcttccagtat-ggtccagggaagccaaaagattggacactcttgatttaaagggaaaaggggtgggcagtggaggaa--ag--ggga------aaaaaaga----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886382 146 + 189454096 ttggtttttagctcatcagctt------tgttagtgtattttatgtgtgacccaagacaattcttccagtat-ggtccagggaagccaaaagattggacactcttgatttaaagggaaaaggggtgggcagtggaggaa--ag--ggga------aaaaaaga----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264127 146 - 25927173 ttggtttttagctcatcagctt------tgttagtgtattttatgtgtgacccaagacaattcttccagtat-ggtccagggaagccaaaagattggacactcttgatttaaagggaaaaggggtgggcagtggaggaa--ag--ggga------aaaaaaga----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303759 152 + 4669795 ttggtttttagctcatcagctttgttagtgttagtgtattttatgtgtgacccaagacaattcttccagtat-ggtccagggaagccaaaagattggacactcttgatttaaagggaaaaggggtgggcagtggaggaa--ag--ggga------aaaaaaga----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262838 154 + 135778131 ttggtttttagctcatcagctttgttagtgttagtgtattttatgtgtggcccaagacagttcttccagtat-ggtccaggggagccaaaagattggacactcttgatttaaagggaaaaagggtgggcagtggaggaaagag--ggga------aaaaaaga----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696156 152 - 2847728 ttggtttttagctcatcggctttgttagtgttagtgtattctatgtgtgacccaagacaattcttccagtat-ggtccagggaagccaaaagattggacactcttgatttaaagggaagaggggtgggcagtggaggaa--ag--gggg------aaaaaaga----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822597 148 + 2368649 ttggtttttagctcatcagctt------tgttagtgtattttatgtgtggcccaagacagttcttccaggat-ggtccagggaagccaaaagattggacactcttgatttaaacggaaaaagggtgggcagtggaggaaagag--ggaa------aaaaaagg----- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189574948 146 - 190850796 ttgttttttagctcatcagctttgttagtgttagtgggttttgggtgtggcccaagacaattcttccagtgt-ggcccagcgatgccaaaagatt--------CCAATCTTTTGGGAAGAAGGGTGGGCAGTTGAGGAA--AAGCGGgg------ggaaaaaa----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062453 152 - 14256875 ttgttttttagctcatcagctttgttagtgttagtggattttatgtgtggcccaaggcaattcttccagcat-ggcccagcgaagccaaaagattggacaccccagatttaaagggaaaaaacctgggcagtcgaggaa--ag--aggg------gaaaaaga----- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950363 151 - 2196201 ttgttttttagctcatcagctttgttagtgttagtgaattttatgtgtggcccaagacaattcttccagtgt-ggtccagctaagccaagagattggacaccccagatttaaagggaaaaagggtgggcagtcgaggaa--a---gagg------ggaaaaaa----- i cebCap1.NW_016107886v1 I 28 C 0 s aotNan1.NW_018492112v1 3346489 157 - 5030052 ttgttgttttagtcatcagctttgttagtgttagtggattttatgtgtggcccaacacaattctttccatgtgggcccagggaaaccaaaagattggacacc-cagatttaaagggaaaaagagtgggcagtcgaggaa--ag--aggg------gaaaaaaaagaga i aotNan1.NW_018492112v1 C 0 I 309 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=514175.000000 s hg38.chr4_KI270789v1_alt 58435 85 + 205944 gagaag---gtagacaaaacaggaaagtggtt--agtctttggaggctttgattagcacttactgaatctacattttacatgtgaaagg-a s panTro5.chr4 192849599 85 + 194502333 gagaag---gtagacaaaacaggcaagtggtt--agtctttggagtctttgattagcacttactgaatctacattttacatgtgaaagg-a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733849 85 + 195804263 gagaag---gtagacaaaacaggcaagtggtt--agtctttggagtctttgattagcacttactgaatctacattttacatgtgaaagg-a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770386 85 + 4876863 gagaag---gtagacaaaacaggcaagtggtt--agtctttggaggctttgattagcacttactgaatctacattttacatgtgaaagg-a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655905 90 + 115148730 gagacggtagtagacaaaagaggcaagtggttacagtctttggaggctttgattagcacttactgaatctacattttacatgtgaaagg-a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939067 87 + 190429646 gagaag---gtagacaaaagcggtaagtggttacagttttcggaggctttgattaacactttctggatctacattttacctgtgaaacc-a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886528 87 + 189454096 gagaag---gtagacaaaagcggtaagtggttacagttttcggaggctttgattaacactttctggatctacattttacctgtgaaacc-a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264273 87 - 25927173 gagaag---gtagacaaaagcggtaagtggttacagttttcagaggctttgattaacactttctggatctacattttacctgtgaaacc-a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303911 87 + 4669795 gagaag---gtagacaaaagcggtaagtggttacagttttcggaggctttgattaccactttctggatctacattttacctgtgaaacc-a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134262992 87 + 135778131 gagaag---gtagacaaaagcggtaagtggttacagtttttggaagctttgattagcactttctggatcaacattttacctgtgaaacg-a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696308 87 - 2847728 gagaag---gtagacaaaagcggtaagtggttacagtttttggaggctttgagtaacactttctggatctacattttacctgtgaaacc-a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822745 87 + 2368649 gagaag---gtagacaaaagcagtaagtggttacagttttcggaggctttgatgagcactttctggatctacatttcacctgtgaaacg-a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575094 66 - 190850796 gagaag---gtagacaaaagaggcacagggttacgg--------------------cacttactgaatctacattttccgtgtgaaagg-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062605 65 - 14256875 gaggag---gtagacaaaagaggc-catggttgcag--------------------cacttacggaacctgcctcttacgtgaaaggag-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950514 67 - 2196201 gagaag---gtagacagaagaggcacgtggttacag--------------------cacttactgaatctacattttacgtgtgagcaga- i cebCap1.NW_016107886v1 C 0 I 33 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3346646 309 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=159257.000000 s hg38.chr4_KI270789v1_alt 58520 28 + 205944 gtgggtagcgaaacagtgaattatgca------t s panTro5.chr4 192849684 28 + 194502333 gtgggtagtgaaacagtgaattatgca------t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733934 28 + 195804263 gtgggtagtgaaacagtgaattatgca------t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770471 28 + 4876863 gtgggtagtgaaacactgaattatgca------t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112655995 28 + 115148730 gtgggtagtggaacagtgaattattca------t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939154 34 + 190429646 gtgggtagtggaacagtgaattgtgcatttggct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886615 34 + 189454096 gtgggtagtggaacagtgaattgtgcatttggct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264360 34 - 25927173 gtgggtagtggaacagtgaattgtgcatttggct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3303998 34 + 4669795 gtgggtagtggaacagtgaattgtgcatttggct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263079 34 + 135778131 gtgggtagtggaacagtgaactgtgcattcagct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696395 34 - 2847728 gtgggtagtggaacagtgaattgtgcatttggct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822832 34 + 2368649 gtgggtagtggaacagtgaagtgtgcattcggct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575160 26 - 190850796 --aggcagaggaacgctcagttgtgcat------ i calJac3.chr3 C 0 I 5 s saiBol1.JH378165 13062670 26 - 14256875 --gggtggaggagcaccgagttgcgcat------ i saiBol1.JH378165 C 0 I 6 e cebCap1.NW_016107886v1 950581 33 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3346646 309 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1935653.000000 s hg38.chr4_KI270789v1_alt 58548 263 + 205944 agtgctcagtgcgtctgcatttttgcataagata----aagtaaacatagaggaggtgctcaaatatgcattcctctcaggtgagccaagggatgccctctaggcctgtctttgtcaaggtaccggtgaagataagctgttagtttacattgtcaaggtgaaatagaacagcgttctgttttagggtaaagctcttggggcccacgaggaatttccttgtgagcaatttgtgaaggaggccaccgggggagacatgtg-gccttctgt s panTro5.chr4 192849712 261 + 194502333 agtgctcagtgcgtctgcatttttgcataagata----aagtaa--atagaggaggtgctcaaatatgcattcctctcaggtgagccaagggatgccctctaggcctgtctttgtcaaggtaccggtgaagataagctgttagtttacattgtcaaggtgaaatagaacagcattctgttttagggtaaagctcttggggcccacgaggaatttccttgtgagcaatttgtgaaggaggccaccgtgggagacatgtg-gccttctgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192733962 261 + 195804263 agtgctcagtgcgtctgcatttttgcataagata----aagtaa--acagaggaggtgctcaaatatgcattcctctcaggtgagccaagggatgccctctaggcctgtctttgtcaaggtaccggtgaagataagctgttagtttacattgtcaaggtgaaatagaacagcattctgttttagggtaaagctcttgggacccacgaggaatttccttgtgagcaatttgtgaaggaggccaccgtgggagacatgtg-gccttctgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770499 262 + 4876863 agtgctcagtgcgtctgcatttttgcataagata----aagtaaacatagaggaggtgctcaaatatgcattcctctcaagtgagccaa-ggatgccctctaggcctgtctttgtcaaggtaccggtgaagataagctgttagtttacattgtcaaggtgaaatagaacagcattctgttttagggtaaagctcttggggcccacgaggaatttccctgtgagcaatttgtgaaggaggccactgggggagacatgtg-gccttctgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656023 262 + 115148730 agtgcttagtgcttctgca-ttttgcataagata----aggtaaacacagaggaggtgctcaaatatgcattcctctcaggtgagccaagggatgccctctaggcctgtctttgtcaagctacaggtgaaggtaagctgttagtttacactgtcaaggtgaaagaaaacagcattctgttttagggtaaagctcttggggcccacgaggaatttccttgtgagcaatttgtgaaggaggccaccgggggagacatgta-gccttctgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939188 263 + 190429646 cgtgctcagtgtgtctgcacttttgcataagata----aagtaaacatcgaggaggcgctcaaatatacatttctctcaggtgagccaagggatgccctctaggcctgtgtttgtcaaggtacctttgaagataagctgttagtttgca-tgccaaggtgaaatagaatagaattctgttttagggtaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccactggcagagacatgtaggccttctgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886649 263 + 189454096 catgctcagtgtgtctgcgtttttgcataagata----aagtaaacatcgaggaggcgctcaaatatacatttctctcaggtgagccaagggatgccctctaggcctgtgtttgtcaaggtacctttgaagataagctgttagtttgca-tgccaaggtgaaatagaatagaattctgttttagggtaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccgctggcggagacatgtaggccttctgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264394 263 - 25927173 cgtgctcagtgtgtctgcatttttgcataagata----aagtaaacatcgaggaggcgctcaaatatacatttctctcaggtgagccaagggatgccctctaggcctgtgtttgtcacggtacctttgaagataagctgttagtttgca-tgccaaggtgaaatagaatagaattctgttttagggtaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccgctggcggagacatgtaggccttctgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304032 263 + 4669795 cgtgctcagtgtgtctgcatttttgcataagata----aagtaaacatcgaggaggtgctcaaatatacattcctctcaggtgagccaagggatgccctctaggcctgtgtttgtcaaggtacctttgaagataagctgttagtttgca-tgccaaggtgaaatagaatagaattctgttttaggctaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccgctggcggagacatgtaggccttctgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263113 262 + 135778131 agtgctcagtgtgtctgcatttttgcataagata----aagtaaacatcgaggaggcgctcaaatatacattcctctcaggtgagccaagggatgccctctaggcctgtgtttgtcaaggtacctttgaagataagctgttagtttgca-tgtcaaggtgaaatagaatagaattctgttttagggtaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccaccggcagagacatgta-gccttctgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696429 263 - 2847728 cgtgctcagtgtgtctgcatttttgcataagata----aagtaaacatcgaggaggcgctcaaatatacattcctctcaggtgaggcaagggatgccctctaggcctgtgtttgtcaaggtacctttgaagataagctgttagtttgca-tgccaaggtgaaatagaatagaattctgttttagggtaaagatcttggggcccacgtggaatttccttgtgagcaatttgtgaaggaggccgctggtggagacacgtaggccttctgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 822866 257 + 2368649 agtgctccgtgtgtctgcatttttgcataaga---------taaacacggaggaggcgctcacatatacattcctctcaggtgagccaagggatgtcctctaggcctgtgtttgcaaaggtacctttgaagataagctgttagtttgca-tgtcaaggtgaaatcgaacagaattctgttttagggtaaagatcttggggcccacgtggaatctccttgtgagcaatttgtgaaggaggccaccggcggagacatgga-gccttctgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575191 254 - 190850796 agtgctcggtgggtctgcgtttctgcgtaagata----aacgcggagtagaggaagcgctcagatgtgcgttcctctcaggtgaaccaagggctgacttctgggcccgtctttgtcaaggtacttgtgaaggtaagctgttaatttacatcgtcgaggtgaaatagaacagaattctgttttggggaaattttcccgag--------ggaatttccttgtgagcgattcgtgcaggaggcctc-ggggtagacacgga-ggcttccat i calJac3.chr3 I 5 C 0 s saiBol1.JH378165 13062702 255 - 14256875 agtgct-ggtgagtccacatttctgcacaagataagttaaagtggaggagagggggcgctcagatgtgcatgcctctcaggtgagccaaaggatgacttctgggcccgcctttgtcaaggtacttgtgaagctaagctgctaatttacatcatcaaggtgaaatagaacagaat--tgtcttagggaaattctcccagg--------gaaatttccttgtgagcactttgtgcgggaggtcgc-ggggtagacaggta-gccttctat i saiBol1.JH378165 I 6 C 0 s cebCap1.NW_016107886v1 950614 253 - 2196201 agtgctcagtgagtctgcatttctgcacaaggta----aacatggaggagaggaagcgctcagatgt-cattcctctcaggtgagccaaaggatgacttctgggtccgtctttgtcaaggtacttgtgaaggtaagctgtgaatttacatcgccaaggtgaaatagaacaggattctgttttagggaaattctcccagg--------ggaatttcctggtgagcagtttgtgcgggaggcctc-gggttagacatgtc-gccttctgt i cebCap1.NW_016107886v1 I 33 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3346646 309 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=3065829.000000 s hg38.chr4_KI270789v1_alt 58811 353 + 205944 ctttgcagctatctacttaggaacaaaatggaaggcag-tttttgcatgatgcagttactgagcttcacttttccctttggcatagtgagtttggggtcctgagatttttatattcctttcacaGCCTCACTATACTTGAATTAAAA-TACAATCTACATGTTAAAACTGACCACATCATTCTTTCCTGTGTGTCTTCAAAGGATTTAAggcccatccagataatccaagatgatctcatttcaaagccttaattatatctttgatgactctttttccaaataaggtctcaattagaggttcctggaataagacacggactcatctccctgggggccaccattcagcctGATCCG s panTro5.chr4 192849973 353 + 194502333 ctttgcagctatctacttaggaacaaaatggaaggcag-tttttgcatgacgcagttactgagcttcacttttccctttggcatagtgagtttggggtcctgagatttttatattcctttcacaGCCTCACTATACTTGAATTAAAA-TACAATCTACATGTTAAAACTGACCACATCATTCTCTCCTGTGTGTCTTCAAAGGATttaaggcccatccagataatccaagatgatctcatttcaaagccttaattatatctttgatgactctttttccaaataaggtctcaattagaggttcctggaataagacacggactcatctccctgggggccaccattcagccTGATCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734223 353 + 195804263 ctttgcagctatctacttaggaacaaaatggaaggcag-tttttgcatgacgcagttactgagcttcacttttccctttggcatagtgagtttggggtcctgagatttttatattcctttcacaGCCTCACTATACTTGAATTAAAA-TACAATCTACATGTTAAAACTGACCACATCATTCTCTCCTGTGTGTCTTCAAAGGATttaaggcccatccagataatccaagatgatctcatttcaaagccttaattatatctttgatgactctttttccaaataaggtctcaattagaggttcctggaataagacacggactcatctccctgggggccaccattcagccTGATCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3770761 352 + 4876863 ctttgcagctatctacttaggaacaaaatggaaggcag-tttttgcatgatgcagttactgagcttcacttttccctttggcatagtgagtttggggtcctgagatttttatattcctttcacaGCCTCACTATACTTGAATTAAAA-TACAATCTACATGTTAAAACTGACCACAACATTCTCTCCTGTGTGTC-TCAAAGGATttaaggcccatccagataatccaagatgatctcatttcaaagccttaattatatctttgatgactctttttccaaataaggtctcaattagaggttcctggaataagacacggactcatctccctgggggccaccattcagccTGATCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656285 353 + 115148730 ctttgcaactatctacttaggaacaaaatggaaggcag-tttttgcatgacgcagttactgagcttcacttttccctttggtatagtgaatttggggtcctgagatttttatattcctttcacaGCCTCACTATATTTGAATAAAAA-TATAATCTACATGTTAAAACTGACCACATCATTCTCTCCTGTGTGTCTTCAAAGGATTTAAggcccatccagataatccaagatgatctcatctcaaagccttaattatacctttgatgaccctttttccaaataaggtctcaattacaggttcctggaataagacacagacttatctccctggggaccatcattcagcctGATCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939451 354 + 190429646 cttcacagctatctacttaggaacaaaatggaaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgaggtatttatgttcctttcacaGCCTCACTATACTTGAATAAAAATTACAACCTACATGTTAAAACTGACCACATCACTCTCTCCTGTGTGTCTTCAAAAGATAtaaggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttgatgaccctttttccaaataaggtct-aattagaggttcctggaataagacacggacttatctccctaggggccaccattcagccTGATCCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187886912 354 + 189454096 cttcacagctatctacttaggaacaaaatggaaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgaggtatttatgttcctttcacaGCCTCACCATACTTGAATAAAAATTACAACCTACATGTTAAAACTGACCACATCACTCTCTCCTGTGTGTCTTCAAAAGAGGTAAggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttgatgaccctttttccaaataaggtct-aattagaggttcctggaataagacacggacttatctccctaggggccaccattcagcctGATCCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24264657 354 - 25927173 cttcacagctatctacttaggaacaaaacggaaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgaggtatttatgttcctttcacagcctcaccatacttgaataaaaattacaacctacatgttaaaacTGACCACATCACTCTCTCCTGTGTGTCTTCAAAAGATAtaaggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttgatgaccctttttccaaataaggtct-aattagaggttcctggaataagacacggacttacctccctaggggccaccattcagccTGATCCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304295 354 + 4669795 cttcacagctatctacttaggaacaaaatggaaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgagatatttatgttcctttcacagcctcaccatacttgaataaaaattacaacctacatgttaaaacTGACCACATCACACTCTCCCGTGTGTCTTCAAAAGATGtaaggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttgatgaccctttttccaaataaggtct-aattagaggttcctggaataagacacggacttacctccccaggggccaccattcagccTGATCCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263375 352 + 135778131 cttcgcagctatcgacttaggaacaaaatggaaggcag-tttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgagatatttatgttcctttcacaGCCTCTCCATACTTGAATAAAAA-TACAATCTACATGTTAAAACTGACTACATCACTCTCTCCTGTGTGTCTTCAAAAGATGTAAggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttcatgaccctttctccaaataaggtct-aattagaggttcctggaataagacacggacttacctccctaggggccaccattcagcctGATCCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2696692 354 - 2847728 cttcacagctatctacttaggaacaaaatggaaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgagatatttatgttcctttcacagcctcaccatacttgaataaaaattacaacctacatgttaaaacTGACCACATCACTCTCTCCTGTGTGTCTTCAAAAGAGGtaaggcccatccagataatccaagatgatctaatctcaaagccttaattatatctttgatgaccctttttccaaataaggtct-aattagaggttcctggaataagacacggacttacctccccaggggccaccattcagccTGATCCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823123 349 + 2368649 cttcgcagctatctacttaggaacaa-----aaggcagttttttgcaagacgcagttactgagcttcacttttccctttggtgtagtgagtttggggtcctgagatatttatgttcctttcacaGCCTCACCATACTTGAATAAAAATTACAACCTACGTGTTAAAACTGACCACATCACTCTCTCCTGTGTGTCTTCCAAAGATGtaaggcccatccagataatccaagatgatctaatctcaaacccttaattatacctttgataaccctttttccaaataaggtct-aattagaggttcctggaataagacatggacttacctccctaggggccaccattcagccTGATCTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575445 329 - 190850796 cttcgcagc--tctgcttaggaacaaaacggaaggcag-tttttgcctgactgggctactaagcttcactttttccctcggcatagcgagttcagggtcctgagactttcatgtccctttcacaGCCGCGCCATACCTGAATGAAAA-TA-AGTCTCCACATTAAAAGTGGCCACATCACTCTCTCCCGTGTGTCCTGGAAggatttgaggtccacccagataatccaagatgaccccacctcagag-cttaattatatctttgatggccctttttccgaataaggtctcaattcgaggtTCC------------TGGAACGACCTCCCTAGCGGCCTCCGTTCAGC-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13062957 333 - 14256875 gttcgcagctgtctacttaggaacaaaatggaaggcag-tttttgcctgacttggctgctaagcttcacgttttccttcggcatagtgagttgggggtcctgacacttttacgtctctttcacaGCCTCGCCATACCTGAATGAAAA-TACAGTCTCCACGTTAAAGGTGACCACACCACTCTCTCCCGTGTGTCCTGGAAGGATTTGAggtccccccggatgatccaaaatgaccccacctcaaagccttaattatatcttcggtggcccttttcccaaataatgtctcaattagaggttcc------------tggaataagacatggaACGGTTTCCATTCAGC-------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 950867 342 - 2196201 cgtcacagctgtccacttaggaacaaaatggaaggcag-cttttgcctgactcggctactgagcttcacgttttccttcggcatagtgagtctggggtcccgacactct-atgtccctttcacaGCCTCCCCATACCTGAATGAAAA-TACAGTCTCCCTGTTAAAAGTGACCCCACCACTCTCTCCCGTGTGTCCTGGAAggatttgaggtctccccagataatccaagacgaccccacctcaaagccttaattacatcttcgatggcccttttcccaaataaggtctcagttagaggttcctgg-ataagacatggaactgtctccctggcggcctccattcag--------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3346955 336 - 5030052 cttcgcagctatctacttaggaacaaaacggaagcagt-tttttgccttactcggccactaagcttcactttttccttcagcatagtgagtttggggtcc-------cttatgtccctttcacaGCCTCGCCATACTTGAATGAAAA-TACTGTCTCCATGTTAAAAGTGACTACATCACTCTCTCCCATGTGTCCTGGAAggatttgaggtccacccagataacccaagatgaccacaactcaaagccttaattatatctttgatggccctttttccaaataaggtctcaattagaggttcctggaataagacacggaacaatctccctggcg--ctccattcagc-------- i aotNan1.NW_018492112v1 I 309 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1393125 1131 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=409539.000000 s hg38.chr4_KI270789v1_alt 59164 47 + 205944 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC s panTro5.chr4 192850326 47 + 194502333 GAAGGAAGGCCATGATTTCAGCTCACTGGGATTTGAGACAAAGAGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734576 47 + 195804263 GAAGGAAGGCCATGATTTCAGCTCACTGGGATTTGAGACAAAGAGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771113 47 + 4876863 GAAGGAAGGCCATGATTTCAGCTCACTGGGATTTGAGACAAAGAGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656638 47 + 115148730 GAAGGAAGGGCATGATTTCAGCTCTCTGTGATTTGAGACAAAGAGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939805 47 + 190429646 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887266 47 + 189454096 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265011 47 - 25927173 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i macNem1.NW_012013133v1 C 0 I 307 s cerAty1.NW_012001672v1 3304649 47 + 4669795 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263727 47 + 135778131 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697046 47 - 2847728 GAAGGAAGGCCGTGATTTCAGCTCTCTGGGATTTGAGACAAAGAGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823472 47 + 2368649 GAAGGAAGGCCATGATTTCAGCTCTCTGGGATTTCAGACAAAGAGGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575774 37 - 190850796 ----------CATGATTTCAGCTCCCTGGGATTGGAGACTAAGAGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063290 36 - 14256875 ----------CACGATTTCAGC-CCCTGGGACTGGAGACTAAGAGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951209 36 - 2196201 ----------cATGATTTCGGC-CCCTGGGATTGGAGACCAAGGGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3347291 36 - 5030052 ----------cATGA-TTCAGCTCCCCTGGATTGGAGACTGAGAGGC i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1394256 47 - 2520184 GAAGGTAGGCCGTGGAAGCAGCTCTCCGGTGCCCGCATGGAAGAGGC i dasNov3.JH570353 I 1131 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1280313.000000 s hg38.chr4_KI270789v1_alt 59211 138 + 205944 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCATGTACCCACATGA----TTGAGTGTGGGCTGAGGGTGAATCCAAGAAGGGCTTTGTTTTGTGGTCAGTACAGGCTTTGGTCCA-CAGAGACAACAATACTT-T s panTro5.chr4 192850373 138 + 194502333 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCATGTACCCACATGA----TTGAGTGTGGGCTGAGGGTGAATCCAAGAAGGGCTTTGTTTTGTGGTCAGTACAGGCTTTGGTCCA-CAGAGACAACAATACTT-T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734623 138 + 195804263 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCATGTACCCACATGA----TTGAGTGTGGGCTGAGGGTGAATCCAAGAAGGGCTTTGTTTTGTGGTCAGTACAGGCTTTGGTCCA-CAGAGACAACAATACTT-T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771160 139 + 4876863 CCCTTTTCTTTCATTTTATCTTTTTCATGTCTCTTCTTGCCATGTACCCACATGA----TTGAGTGTGGGCTGAGGGTGAATCCAAGAAGGGCTTTGTTTTGTGGTCAGTACATGCTTTGGTCCA-CAGAGACAACAATACTT-T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656685 138 + 115148730 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCATGTACCCACATGA----CTGAGTGTGGGCTGAGGGTGAATCCAAGAAGGGCTTTGTTTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGACAACAATACTT-T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939852 138 + 190429646 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCAAGTACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGACAACAATACTT-T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887313 139 + 189454096 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCAAGTACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCAGGAGAGACAACAATACTT-T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265365 139 - 25927173 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCAAGTACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGACTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCAGGAGAGACAACAATACTT-T i macNem1.NW_012013133v1 I 307 C 0 s cerAty1.NW_012001672v1 3304696 138 + 4669795 CCCTTTTCTTTCATTTTGTC-TTTTCATGTCTCTTCTTGCCATGGACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGGCAACAATACTT-T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263774 138 + 135778131 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCCATGGACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGACAACAATACTT-T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697093 138 - 2847728 CCCTTTTCTTTCATTTTGTC-TTTTCATGTCTCTTCTTGCCATGGACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTGTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGACAACAATACTT-T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823519 138 + 2368649 CCCTTTTCTTTCATTTTATC-TTTTCATGTCTCTTCTTGCTATGTACCCACATGA----TTGTGTGTGGGCTGAGGGTGAATCCAAGAAGGCCTTTGTTTTGTGGTCAGTACAGGCTTTGGTCCA-GAGAGACAATAATACTT-T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575811 132 - 190850796 CCCT----TTTCACTTTATC-TTTCCGTGTCTCTTCTTGCCTTGCATCCACCTGA----TCGAGTGTGGGCTGAGAGTGAAGCCACGAA-GGCTTCGTTTTGTGGTCAGTGGAGGCCGTGGTCCC-GAGGGACAGCAATACCT-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063326 137 - 14256875 CCCTTCTCTTTCACTTTATC-TTTTCGTGTCTCCCCTTTTCGTGCATCCACAGGA----TTGAGTGTGGGCTGAGAGTGAGGCCAAGAAGGGCTTCGTTTTGTGGTCGGTGGAGGCCATGGTCCA-GAGGGACAACAAGGCTT-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951245 137 - 2196201 CCCTTTTCTTTCACTTTATC-TTTTCATGTCTCTTCTTGCCGTGCATCCGCATGA----TCGAGTGTGGGCTGAGAGTGAGGCCACAGAAGGCTTCGTTTTGTGGTCAGTGGAGGCCGTGGTCCA-GAGGGACAATAATACTT-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3347327 131 - 5030052 Cctt-ttctttcactttatc-ttttcttgtctcttcttGCCGTGCATCCACATGA----TCGAGTGTGGGCTGAGAGTGAA--CACGAAGGGCTACGTTTTG-GGTCAGTGGAGGCTGTGGTCCA-GAGGGAC---AATACTTT- i aotNan1.NW_018492112v1 C 0 I 43 s dasNov3.JH570353 1394303 140 - 2520184 CCCTTGGTCTTCATTTTGTC-TCCCCGTGTCGCTTAGTGTCCTGCACCTACACAAGCAGCTAGGTG-GGGCTGAGAGGAAACCCGGGAGGAGATTTAATATGTTTCCAGCACAGGCCTTGAACAA-GAATGACACAGGAGCTT-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=68106.000000 s hg38.chr4_KI270789v1_alt 59349 8 + 205944 CAATACTC s panTro5.chr4 192850511 8 + 194502333 CAATACTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734761 8 + 195804263 CAATACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771299 8 + 4876863 CAATACTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656823 8 + 115148730 CAATACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939990 8 + 190429646 CAGTACTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887452 8 + 189454096 CAGTACTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265504 8 - 25927173 CAGTACTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304834 8 + 4669795 CAGTACTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263912 8 + 135778131 CAGTACTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697231 8 - 2847728 CAGTACTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823657 8 + 2368649 CAGTACTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575943 7 - 190850796 GA-TACTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063463 8 - 14256875 CAGTACTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951382 8 - 2196201 CAGTACTC i cebCap1.NW_016107886v1 C 0 I 26 s dasNov3.JH570353 1394443 8 - 2520184 CAACACAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347458 43 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=167896.000000 s hg38.chr4_KI270789v1_alt 59357 26 + 205944 TTTTGTTCTGCCCCAGAGGAGCTCAA s panTro5.chr4 192850519 26 + 194502333 TTTTGTTCTGCCCCAGGGGAGCTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734769 26 + 195804263 TTTTGTTCTGCCCCAGAGGAGCTCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771307 26 + 4876863 TTTTGTTCTGCCCCAGAGGAGCTCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656831 26 + 115148730 TTTTGTTCTGCCCCAGAGGAGCTCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188939998 26 + 190429646 TTTGGTTCTGCCCCAGAGGAGCTCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887460 26 + 189454096 TTTGGTTCTGCCCCAGAGGAGCTCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265512 26 - 25927173 TTTGGTCCTGCCCCAGAGGAGCTCAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304842 26 + 4669795 TTTGGTTCTGCCCTAGAAGAGCTCAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263920 26 + 135778131 TCTGGTTCTGCCCCAGAGGAGCTCAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697239 26 - 2847728 TTTGGTTCTGCCCTAGAAGAGCTCAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823665 26 + 2368649 TTTGGTTCTGCCCCAGAGGAGCTCAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575950 24 - 190850796 --TTGTTCTGCCTTGGTGGAGGGCAA i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13063471 24 - 14256875 --TTGTTCTGCCTTGGTGGAGGGCAA i saiBol1.JH378165 C 0 I 2 s dasNov3.JH570353 1394451 18 - 2520184 ------TCTTCCTCATTGAGGTAG-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 951390 26 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347458 43 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=88426.000000 s hg38.chr4_KI270789v1_alt 59383 12 + 205944 CAC--AGAATTGCC s panTro5.chr4 192850545 12 + 194502333 CAC--AGAATTGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734795 12 + 195804263 CAC--AGAATTGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771333 12 + 4876863 CAC--AGAATTGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656857 14 + 115148730 CACAGAGAACTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940024 14 + 190429646 CACAGAGAATTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887486 14 + 189454096 CACAGAGAATTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265538 14 - 25927173 CACAGAGAATTGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304868 14 + 4669795 CACAGAGAATTGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263946 14 + 135778131 CACAGAGAATTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697265 14 - 2847728 CACAGAGAACTGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823691 14 + 2368649 CACAGAGAATTGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575976 12 - 190850796 --CAGAGAATTGGC i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13063497 12 - 14256875 --CAGAGAATCGCC i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 951416 12 - 2196201 --CAGAGAATCGCC i cebCap1.NW_016107886v1 I 26 C 0 s dasNov3.JH570353 1394469 8 - 2520184 CGC------TCGCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347458 43 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=336140.000000 s hg38.chr4_KI270789v1_alt 59395 32 + 205944 TAGAACAAGAAACTGGGTAAGTGTGCTTGGAA s panTro5.chr4 192850557 32 + 194502333 TAGAACAAGAAACTGGGTAAGTGTGCTTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734807 32 + 195804263 TAGAACAAGAAACTGGGTAAGTGTGCTTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771345 32 + 4876863 TAGAACAAGAAACTGGGCAAGTGTGCTTGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656871 32 + 115148730 TAGAACAAGAAACTGGGTAAGTGTGCTTGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940038 32 + 190429646 TGGAACAAGAAACTGGGTAAATGTGCTTGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887500 32 + 189454096 TGGAACAAGAAACTGGGTAAATGTGCTTGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265552 32 - 25927173 TGGAACAAGAAACTGGGTAAATGTGCTTGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304882 32 + 4669795 TGGAACAAGAAACTGGGTAAGTGTGCTTGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263960 32 + 135778131 TAGAACAAGAAACTGGGTAAGTGTGCTTGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697279 32 - 2847728 TGGAACAAGAAACTGGGTAAGTGTGCTTGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823705 32 + 2368649 TAGAATAAGAAACTGGGTAAGTGTGCTTGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189575988 31 - 190850796 GAGAATAAGAAACTGGGTACGTGTGCTTGGA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063509 32 - 14256875 TAGAGCAAGAAGCTGGGTGCGTGTGCTTGGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951428 32 - 2196201 TAGAACAAGAAGCTGGGTGCGTGTGCTTGGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3347501 32 - 5030052 TAGAACAAGAAACTGGGTACGTGTGCTTGGAA i aotNan1.NW_018492112v1 I 43 I 765 s dasNov3.JH570353 1394477 32 - 2520184 TGTAAAAAGAAACTGGGTAAATTCCCTTGGCG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=293197.000000 s hg38.chr4_KI270789v1_alt 59427 32 + 205944 CATACGCTTGTCTTCTCttctttggactcttg s panTro5.chr4 192850589 32 + 194502333 CATACCCTTGTCTTCTCttctttggactcttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734839 32 + 195804263 CATACCCTTGTCTTCTCttctttggactcttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771377 32 + 4876863 CATAACCTTGTCTTCTCttctttggactcttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656903 32 + 115148730 CATACCCTTGTCTTCTCTTCTTTGGACTCTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940070 32 + 190429646 CATACCCTTGTCTTCTCttctttggattcttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887532 32 + 189454096 CATACCCTTGTCTTCTCTTCTTTGGATTCTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265584 32 - 25927173 CATACCCTTGTCTTCTCttctttggattcttg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304914 32 + 4669795 CATACCCTTGTCTTCTCttctctgaattcttg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134263992 32 + 135778131 CATACCCTTGTCTTCTCTTCTTTGGATTCTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697311 32 - 2847728 CATACCCTTGTCTTCTCttctctggattcttg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823737 32 + 2368649 CATACCCTTGTcttgtcttctttggattcttg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576019 32 - 190850796 ACGACCCTTGTCTTCTCTTCTCTGCACTCTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063541 32 - 14256875 CCAACCCTTGTCTTCTCTTCTCTGCACTCTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951460 32 - 2196201 CAAACCCTTGTCTTCTCTTCTCTGCACCCTGG i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1394509 32 - 2520184 TACATCCTCGGCTTCTCTTCCTTGGACTCCTG i dasNov3.JH570353 C 0 I 1539 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=200544.000000 s hg38.chr4_KI270789v1_alt 59459 24 + 205944 attgcaacactcatctctgcctgg s panTro5.chr4 192850621 24 + 194502333 attgcaacactcatctctgcctgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734871 24 + 195804263 attgcaacactcatctctgcctgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771409 24 + 4876863 attgcaacactcatctctgcctgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656935 24 + 115148730 ATTGCAAcactcatctctgcctgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940102 24 + 190429646 attgcaacagtcttctctgcctgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887564 24 + 189454096 ATTGCAACAGTCTTCTCTGCCTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265616 24 - 25927173 attgcaacagtcttctctgcctgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304946 24 + 4669795 attgcaacactctcctctgcctgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264024 24 + 135778131 ATTGCAACACTCTTCACTGCCTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697343 24 - 2847728 attgcaacactctcctctgcctgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823769 24 + 2368649 attgcaacactcttctctgcctgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576051 24 - 190850796 ACTGCAGCGCTTGTCTCTGCCTGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063573 24 - 14256875 ATTGCAACACTCGCCTCTGCCTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 951492 24 - 2196201 ATTGCAACACTCGCCTCTGCCTGG i cebCap1.NW_016107886v1 C 0 I 468 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1394541 1539 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=209474.000000 s hg38.chr4_KI270789v1_alt 59483 53 + 205944 atattcacatggacttatactctctgtcttttcttctgtgtgtcttctcttct s panTro5.chr4 192850645 53 + 194502333 atattcacatggacttatactctctgtcttttcttctgtgtgtcttctcttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734895 53 + 195804263 atattcacatggacttatactctctgtcttttcttctgtgtgtcttctcttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771433 53 + 4876863 atattcacatggacttatactctctgtcttttcttctgtgtgtcttctcttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112656959 53 + 115148730 atattcacatggacttatactctctgtcttttcttctgtgtgtcttctcttct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940126 37 + 190429646 atattcacatggccgtacactctc----------------cgccttctctctt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887588 37 + 189454096 ATATTCACATGGCCGTACactctc----------------cgccttctctcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265640 37 - 25927173 atattcacatggccgtacactctc----------------tgccttctctcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3304970 37 + 4669795 atattcacatggccttacactctc----------------ttccttctcttct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264048 37 + 135778131 ATATTCACATGGCCTTATACTCTC----------------TGCCTTCTCTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697367 37 - 2847728 atattcacatggccttacactctc----------------ttccttctcttct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823793 37 + 2368649 atattcacatggccttatactctc----------------tgccttctcttct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576075 39 - 190850796 GTCGTCACATGGCCGTCCTCTCTG--------------TGTGTCTTCTCTTTT i calJac3.chr3 C 0 I 378 s saiBol1.JH378165 13063597 39 - 14256875 GCCGTGACATGGCCATCCTCTCTG--------------TGTGTCTTCTCTTTT i saiBol1.JH378165 C 0 I 18 e cebCap1.NW_016107886v1 951516 468 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1394541 1539 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=21425.000000 s hg38.chr4_KI270789v1_alt 59536 3 + 205944 gta s panTro5.chr4 192850698 3 + 194502333 gta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734948 3 + 195804263 gta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771486 3 + 4876863 gta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657012 3 + 115148730 gta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940163 3 + 190429646 gta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887625 3 + 189454096 gta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265677 3 - 25927173 gta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305007 3 + 4669795 gta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264085 3 + 135778131 GTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697404 3 - 2847728 gta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823830 3 + 2368649 gtt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576492 3 - 190850796 GTG i calJac3.chr3 I 378 C 0 s saiBol1.JH378165 13063654 3 - 14256875 GTA i saiBol1.JH378165 I 18 C 0 e cebCap1.NW_016107886v1 951516 468 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1394541 1539 - 2520184 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=10920.000000 s hg38.chr4_KI270789v1_alt 59539 1 + 205944 t s panTro5.chr4 192850701 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734951 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771489 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657015 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940166 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887628 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265680 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305010 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264088 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697407 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823833 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576495 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13063657 1 - 14256875 T i saiBol1.JH378165 C 0 I 418 s cebCap1.NW_016107886v1 951984 1 - 2196201 t i cebCap1.NW_016107886v1 I 468 C 0 s dasNov3.JH570353 1396080 1 - 2520184 T i dasNov3.JH570353 I 1539 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=41644.000000 s hg38.chr4_KI270789v1_alt 59540 5 + 205944 gtcac s panTro5.chr4 192850702 5 + 194502333 gtcat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734952 5 + 195804263 gtcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771490 5 + 4876863 gtcat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657016 5 + 115148730 gtcat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940167 5 + 190429646 gtcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887629 5 + 189454096 gtcat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265681 5 - 25927173 gtcat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305011 5 + 4669795 gtcat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264089 5 + 135778131 GTCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697408 5 - 2847728 gtcat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823834 5 + 2368649 gtcat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576496 5 - 190850796 GTCAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 951985 5 - 2196201 gtcat i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1396081 5 - 2520184 GTGGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e aotNan1.NW_018492112v1 3347533 765 - 5030052 I e saiBol1.JH378165 13063658 418 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=260160.000000 s hg38.chr4_KI270789v1_alt 59545 28 + 205944 tgaatgttgggcccacctggataaccca s panTro5.chr4 192850707 28 + 194502333 tgaatgttgggcccacctggataaccca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734957 28 + 195804263 tgaatgttgggcccacctggataaccca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771495 28 + 4876863 tgaatgttgggcccacctggataaccca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657021 28 + 115148730 tgaatgttgggcccacctggataaccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940172 28 + 190429646 tgaatgttgggcccacctagataacccg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887634 28 + 189454096 tgaatgttgggcccacctagataacccg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265686 28 - 25927173 tgaatgttgggcccacctagataacccg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305016 28 + 4669795 tcaatgttgggcccacctagataacccg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264094 28 + 135778131 TCAGTGttgggcccacctggataacccg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697413 28 - 2847728 tcaatgttgggcccacctagataacccg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823839 28 + 2368649 tgaatgttgggcccacctagataacctg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576501 28 - 190850796 TGAAGGttgggtccacctggataaccca i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 951990 28 - 2196201 tgaacgttgggtccacctgggtaaccca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3348298 28 - 5030052 TGAacgttgggtccacctgggtaaccca i aotNan1.NW_018492112v1 I 765 C 0 s dasNov3.JH570353 1396086 28 - 2520184 TGGACTCTGGGCTCCCCTCAGTAACCCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e saiBol1.JH378165 13063658 418 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1897641.000000 s hg38.chr4_KI270789v1_alt 59573 207 + 205944 agatgatctcatcttgaggtac-----ttaattatatctgcaaataacattttcctaaataaggtcacaggcatagttttgggggactgggacatggatatatctttttggagaccatgatttaactcactataGGCTAAATTCTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGGCTCTGAGATGTGAGA s panTro5.chr4 192850735 207 + 194502333 agatgatctcatcttgaggtac-----ttaattatatctgcaaataacattttcctaaataaggtcacaggcatagttttgggggactgggacatggatatatctttttggagaccatgatttaactcacTATAGGCTAAATTTTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGGCTCTGAGATGTGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192734985 196 + 195804263 agatgatctcatcttgaggtac-----ttaattatatctgcaaataacattttcctaaataaggtcaca-----------gggggactgggacatggatatatctttttggagaccatgatttaactcacTATAGGCTAAATTTTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGGCTCTGAGATGTGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771523 207 + 4876863 agatgatctcattctgaggtac-----ttaattatatctgcaaataacattttcctaaataaggtcacaggcatagttttgggggactgggacatggatatatctttttggagactatgatttaactcacTATAGGCTAAATTCTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGGCTCTGAGATGTGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657049 207 + 115148730 agataatctcatcttgaggtcc-----ttaattatatctgcaaagaacactttcctcaataaggtcacagacacagttttgggggactgggacatggatatatctttttggagaccatgatttaactcactataGGCTAAATTCTCAGCCTTAAAAGGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGGCTCTGAGATGTGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940200 207 + 190429646 agatgatctcatcctgacatcc-----ttaattatatctgcaaagaacattttcctaaataaggtcacaggcacagttttgggggactagaatatggatatatctttttggagactgtgatttaactcacTATAGGCTAAATTCTCAGCCCTAAAGAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGTCTCTGAGACATGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887662 207 + 189454096 agatgatctcatcctgacatcc-----ttaattatatctgcaaagaacattttcctaaataaggtcacaggcacagttttgggggactagaatatggatatatctttttggagactgtgatttaactcactataGGCTAAATTCTCAGCCCTAAAGAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGTCTCTGAGACATGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265714 207 - 25927173 agatgatctcatcctgacatcc-----ttaattatatctgcaaagaacattttcctaaataaggtcacaggcacagttttgggggactagaatatggatatatctttttggagactgtgatttaactcacTATAGGCTAAATTCTCAGCCCTAAAGAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGTCTCTGAGACATGAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305044 207 + 4669795 agatgatctcatcctgacatcc-----ttaattatatctgcaaagaacattttcctaaataaggtcacaggcacagttttgggggactagaatatggatatatctttttggagactgtgatttaactcacTATAGGCTAAATTCTCAGCCCTAAAAAGGGTCCTACAC-AAAGTGAGGGCACTCAGTGGAAGGAAGGTCTCTGAGACGTGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264122 212 + 135778131 agatgatctcatcctgacatccttaatttaattatatctgcaaagaatattttcctaaataaggtcataggcacagttttgggggactagaatatggatatatctttttggagactgtggtttaactcactataGGCTAAATTCTCAGCCCTGAAAAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGTCTCTGAGACTTGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697441 207 - 2847728 agatgatctcatcctgacatcc-----ttaattatatctgcaaagaacattttcctaaataaggtcacaggcacagttttgggggactagaatatggatatatctttttggagactgtgatttaactcacTATAGGCTAAATTCTCAGCCCTAAAAAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAGGAAGGTCTCTGAGACGTGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 823867 212 + 2368649 agatgatctcatcctgacatccttaacttaattatatctgcaaagaacattttcctaaatgaggtcacaggcacagttttgggggactagaatatggatatatctttttggaaactgtgatctaactcacTATAGGCTAAATTCTCCGCCCTAAAGAGGGTCCTACAC-AAAGTGAGGGCACTCAATGGAAAGAAGGTCTCTGAGACGTGAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576529 207 - 190850796 ggatgatctcgtcttgagatccttaatttcattatatctgcaaagaacattttcccaaataaggtcacaggcacagctttgggagaccaggacacagatgcatttttttggagaccatgatttaactcactataGGCTAAATTCTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGAGCAC-----GGAAACAAGGGCTCTGAGTCGTGAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064076 207 - 14256875 AgatgatctcatcttgagatccttacttttattatatctgcaaagaacattttcctaaataaggtcacaggcacagcttagggggactaggacatggatatatttttttgaagaccatgatttaactcactataGGCTAAAGTCTCAGCCCTAAAAGGGGTCCTACAC-AAAGTGAGAGGAC-----AGAAACAAGGGCTCTGAGTCGTGAGA i saiBol1.JH378165 I 418 C 0 s cebCap1.NW_016107886v1 952018 206 - 2196201 agatgatctcgtcttgagatccttaatttcattacatctgcaaagaacattttcccacgtaatgtcacaggcacagctttggggtactaggacacagatacatctttctggagaccatgatttaactcactataGGCTAAATTCTCAGCCCTAGAA-GGGTCCTACGC-AAAGTGAGAGCAC-----AGAAACAAGGGCTCTGAGTCGTGAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3348326 165 - 5030052 agatgatctcgtcttgagatccttaatttcattatatctgcaaagaacattttcccaaataaagtcacaggcacagctttgggggactaggacatggatatatctttctggagaccgtgatttaactcaccGTAGGCTAAATCCTC------------------------------------------------AGGGCTCTGAGTTGTGAGA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1396114 189 - 2520184 GGATGACCTTGTCTTGGGGTCTTCAATTTTATTCCATCTGT--------TCTTCTCCAA-----GCATCCGCATGTTCTAGGG---TTAGAATGTGAGTGTACCTTCTTGGGGTCC-TGCTGCGCCT--CCACAGACTGAACTTGCAGCCCTTGCATGCCTCTTCCAAGAGAGTGATGGTTCT--ATGGGGAAGACGGCTCTGAG---TGGGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16886171 1601 - 59632846 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1938232.000000 s hg38.chr4_KI270789v1_alt 59780 203 + 205944 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTCCCCTGGACT-----------ATCAGGTCCAGG-AGAAGAGACTCCTTCCTCTCTCAGGTTGAGACTCCCACGGCCTGGAGATTAGGCAAAGCCTCTGTTCGATCTTTGCATGAAATTAAGTAGTCTTAGTGGTCTATTGCAGGGGTCTCTATCTGTGATTGACCTTTACTTATTTCTT s panTro5.chr4 192850942 203 + 194502333 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTCCCCTGGACT-----------ATCAGGTCCAGG-AGAAGAGACTCCTTCCTCTCTCAGGTTGAGACTCCCACGGCCTGGAGATTAGGCAAAGCCTCTGTTCGATCTTTGCATGAAATTAAGTAGTCTTAGTGGTCTATTGCAGGGGTCTCTATCTGTGATTGACCTTTACTTATTTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735181 203 + 195804263 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTCCCCTGGACT-----------ATCAGGTCCAGG-AGAAGAGACTCCTTCCTCTCTCAGGTTGAGACTCCCACGGCCCGGAGATTAGGCAAAGCCTCTGTTCGATCTTTGCATGAAATTAAGTAGTCTTAGTGGTCTATTGCAGGGGTCTCTATCTGTGATTGACCTTTACTTATTTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771730 203 + 4876863 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTGCCCTGGACT-----------ATCAGGTCCAGG-AGAAGAGACTCCTTCCTCTCTCAGGTTGAGACTCCCACGGCCTGGAGATTAGGCAAAGCCTCTGTTCTATCTTTGCATGAAATTAAGTAGTCTTAGTGGTCTATTGCAGGGGTCTCTATCTGTGATTGACCTTTACTTATTTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657256 202 + 115148730 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTCCCCTGGACT-----------ATCTGGTCCAGG-AGAAG-GACTCCTCCGTCTCTCAGGTTGAGACTCCCACGGCCTGGAGATTAGGCAAAGACTCTGTTCGATCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCGTTGCAGGGGTCTCTATCTGTGATTGACCTTTACTTATTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940407 203 + 190429646 TAGGAACA-TGTGAACGGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCAGGTTCAGACCCCCAGGTCCTGGAGATTAGGCAAAGCCTCTGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTTACGTATTTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187887869 203 + 189454096 TAGGAACA-TGTGAACGGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCAGGTTCAGACCCCCAGGGCCTGGAGATTAGGCAAAGCCTGTGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTGACTTATTTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24265921 203 - 25927173 TAGGAACA-TGTGAACAGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCAGGTTCAGACCCCCAGGTCCTGGAGATTAGGCAAAGCCTGTGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTTACGTATTTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305251 202 + 4669795 TAGGAACA-TGTGAACGGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCC-GG-AGAAGGGACTCCTCCCTCTCTCAGATTCAGACCCCCAGGGCCTGGAGATTAGGCAAAGCCTGTGTTTGTTCTTTGCATGGAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTGACTTATTTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264334 203 + 135778131 TAGGAACA-TGTGAACGGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCAGGTTCAGACCCCCAGGGCCTGGAGATTAGGCAAAGCCTGTGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGCGTCTCTATTTGTGATTGACCTTTACTTATTTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697648 202 - 2847728 TAGGAACA-TGTGAACGGAACCTTCAACCTACAGA-TTGTCCAGGACT-----------GTCTGGTCC-GG-AGAAGGGACTCCTCCCTCTCTCAGGTTCAGACCCCCAGGTCCTGGAGATTAGGCAAAGCCTGGGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTTTCGTATTTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 824079 203 + 2368649 TAGGAACA-TGTGAACGGAACCTTCAACCCACAGA-TTCTCCAGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCACGTTCAGACCCCCAGGGCCTGGAGATTAGGCAAAGCCTGTGTTTGTTCTTTGCATGAAATTAAGTAGTCTTAGTGGTCCATTGCAGGGGTCTCTATTTGTGATTGACCTTTACTTATTTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576736 201 - 190850796 TAGGAACG-TGTGAATGGAGCGTTCGACCCACAGA-TTCCCCTAGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCTCCCTCTCTCAGGTTCACAC-CCCACAGCCCGGAGATTAGACAAAGCCTCTGTTGGTTC-CTGCATGAAATTAGGCAGTCTTAGTGGTCCATTGCAGGGGGCTGTATCTGTGACTGATCTTCAGTTATTCCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064283 199 - 14256875 GAGGAATG-TGTGAATGGAACGTTTGACCCACAGA-TTTCCCTGGACT-----------GTCTGGTCCAGA-AGAAGGGCCAC--CCCCCGCTGAGGTCCACAC-CCCACAGCCCGGAGATTAGACAAAGCCTCTGTTGGTTC-TTGAGTGAAATTAAGCAGTCTTAGTGGTCCATTGCAGGGGGCTTTAACTGTGATTAACCTTCTGTTATTTCTT i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 952224 193 - 2196201 TAGGAGCG-TGTGAACGGAACGTTCAGCCCACAGA-TTCCCCTGCACT-----------GTCTGGTCCAGG-AGAAGGGATCCC-GCCTCTCTGAGGT--------CCACAGCCCGGAGATTAGACAAAGCCTCCATTGGTTC-TTGAATGAAATTAAGCAGCCTTTGTGGTCCATTGCAGGGGGCTCTATCTGTGATTGACCTTCGGTTATTTCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3348491 194 - 5030052 TAGGAACG-TGTGAACGGAACGTTCAACCCACAGA-TTCCCCTGGACT-----------GTCTGGTCCAGG-AGAAGGGACTCCCCTCTCTCTGAGGT--------CCACAGCCCGAAGATTAGACAAAGCCTCTGTTGGTTC-TTGAATGAAATTAAGCAGTCTTAGTGGCCCATTGCAGGGGGCTCTATCTGTGATTGGCCTTCAGTTATTTCTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16887772 212 - 59632846 TAGGGTCA-CTTGCACACAACCTTGAATCCAAAGA-TTCCTCCAGACTATGGACTCTTGGTCATGTCCAAGCAGACATGACCTCTACC-CTCTCAGGAACAGCTTCCCGT-TCAAGAAGATCATGCAAAGCTTCTCTTGGCTCCTTGCATGAAGTCCGGTAGCTATGG-GATCTATTGCAGGTAACTCTCTCCATGATTATCTTTCACTTATTTCTT i canFam3.chr16 I 1601 C 0 s dasNov3.JH570353 1396303 175 - 2520184 TGGGTCCACTGGGCACG------TGAGTCCACAGACTTCCTCTGGACC-----------CT--------GG-TG---------CTCCCCCTT---GCTGCGCGGCCCCCCGTCCTGGAGGTGATGCAAAGCCTGCCCTGGCTCCTTGCGTGGAGTG----ATTTCTACGTGTCTACTACGGATTTCTGTATCTGTGAATATCGTTCACTTCTTTCTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86522781 2772 - 129401213 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=85925.000000 s hg38.chr4_KI270789v1_alt 59983 9 + 205944 GCTTAATGT s panTro5.chr4 192851145 9 + 194502333 GCTTAATGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735384 9 + 195804263 GCTTAATGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771933 9 + 4876863 GCTTAATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657458 9 + 115148730 GCTTTATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940610 9 + 190429646 GCTTTATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187888072 9 + 189454096 GCTTTATGT i macFas5.chr5 C 0 I 460 s macNem1.NW_012013133v1 24266124 9 - 25927173 GCTTTATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3305453 9 + 4669795 GCTTTATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134264537 9 + 135778131 GCTTTATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2697850 9 - 2847728 GCTTTATGT i manLeu1.NW_012102221v1 C 0 I 474 s colAng1.NW_012116221v1 824282 9 + 2368649 GCTTTATGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189576937 9 - 190850796 GCTTTATGT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 952417 9 - 2196201 GCTTTATGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3348685 9 - 5030052 GCTTTATGT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16887984 9 - 59632846 CCTTTAGGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1396478 9 - 2520184 ATTTTGTGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86522781 2772 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=20766.000000 s hg38.chr4_KI270789v1_alt 59992 3 + 205944 AC-T s panTro5.chr4 192851154 3 + 194502333 AC-T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735393 3 + 195804263 AC-T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3771942 3 + 4876863 AC-T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657467 4 + 115148730 ACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188940619 3 + 190429646 AC-T i rheMac8.chr5 C 0 I 470 s macFas5.chr5 187888541 3 + 189454096 aC-T i macFas5.chr5 I 460 C 0 s macNem1.NW_012013133v1 24266133 3 - 25927173 AC-T i macNem1.NW_012013133v1 C 0 I 470 s cerAty1.NW_012001672v1 3305462 3 + 4669795 AC-T i cerAty1.NW_012001672v1 C 0 I 470 s chlSab2.chr7 134264546 3 + 135778131 AC-T i chlSab2.chr7 C 0 I 470 s colAng1.NW_012116221v1 824291 3 + 2368649 AC-T i colAng1.NW_012116221v1 C 0 I 470 s calJac3.chr3 189576946 3 - 190850796 AC-T i calJac3.chr3 C 0 I 1 s cebCap1.NW_016107886v1 952426 3 - 2196201 AC-T i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3348694 3 - 5030052 AC-T i aotNan1.NW_018492112v1 C 0 I 1 s canFam3.chr16 16887993 3 - 59632846 CC-T i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1396487 3 - 2520184 GC-C i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86522781 2772 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e manLeu1.NW_012102221v1 2697859 474 - 2847728 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=4946.000000 s hg38.chr4_KI270789v1_alt 59995 9 + 205944 ATC---ATTCTC---- s panTro5.chr4 192851157 9 + 194502333 ATC---ATTCTC---- i panTro5.chr4 C 0 I 2 s panPan2.chr4 192735396 9 + 195804263 ATC---ATTCTC---- i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3771945 9 + 4876863 ATC---ATTCTC---- i gorGor5.CYUI01015356v1 C 0 I 3 s nomLeu3.chr7b 112657471 12 + 115148730 ATCTATATTCTT---- i nomLeu3.chr7b C 0 I 2 s macFas5.chr5 187888544 8 + 189454096 ----ATATTCTC---- i macFas5.chr5 C 0 I 3 s calJac3.chr3 189576950 12 - 190850796 ATCTATATTCTG---- i calJac3.chr3 I 1 I 1 s cebCap1.NW_016107886v1 952430 12 - 2196201 ATCTATATTCTG---- i cebCap1.NW_016107886v1 I 1 I 1 s aotNan1.NW_018492112v1 3348698 12 - 5030052 ATGTATATTCTG---- i aotNan1.NW_018492112v1 I 1 I 1 s canFam3.chr16 16887997 10 - 59632846 ATTTATTTTC------ i canFam3.chr16 I 1 I 7 s dasNov3.JH570353 1396490 12 - 2520184 ----AAATACTTTCCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86522781 2772 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 824294 470 + 2368649 I e manLeu1.NW_012102221v1 2697859 474 - 2847728 I e chlSab2.chr7 134264549 470 + 135778131 I e cerAty1.NW_012001672v1 3305465 470 + 4669795 I e macNem1.NW_012013133v1 24266136 470 - 25927173 I e rheMac8.chr5 188940622 470 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=2816860.000000 s hg38.chr4_KI270789v1_alt 60004 373 + 205944 TTTTTTTCTTGAATAAGGTAGTTTA-------------CA-TA-TTAAATTCTTCGCTAAAGATACAGCTCTTAAATTAAAAAA----TACTACTACTACTACCATTTTGCTTTAGTCAGTAAGTTCTGCCTTAATTT-TCTGTCTATTTTATATA-TTTTGTCTATATTTTGTTGATATATTAAAG---TTTTTTCTTGTT---------TTTATTAATATGATGATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGATGTTGTCATATGTGGT----------CAGTTCTTTTACAAATATTCTTCAACGT-TTTTCTCTTTGGCCCTTAATGATATAAGAAAACTTCCAA-AAACTG---TATGTTTTTTAGTGTT--TTGGAGTTTTATTGTTTATTTAA s panTro5.chr4 192851168 370 + 194502333 TTTTTTTCTTGAATAAGGTAGTTTA-------------CA-TA-TTAAATTCTTCGCTAAAGATACAGCTCTTAAATTAAAAAA----TACTACTACTACTACCATTTTGCTTTAGTCAGTAAGTTCTGCCTTAATTT-TCTGTCTATTTTATATA-TTTTGTCTATATTTTGTTGATATATTAAAG---TTTTTTCTTGTT---------TTTATTAAT---ATGATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGATGTTGTCATATGTGGT----------CAGTTCTTTTACAAATATTCTTCAACGT-TTTTCTCTTTGGCCCTTAATGATATAAGAAAACTTCCAA-AAACTG---TATGTTTTTTAGTGTT--TTGGAGTTTTATTGTTTATTTAA i panTro5.chr4 I 2 C 0 s panPan2.chr4 192735406 367 + 195804263 GTTTTTTCTTGAATAAGGTAGTTTA-------------CA-TA-TTAAATTCTTCGCTAAAGATACAGCTCTTAAATTAAAAAA-------TACTACTACTACCATTTTGCTTTAGTCAGTAAGTTCTGCCTTAATTT-TCTGTCTATTTTATATA-TTTTGTCTATATTTTGTTGATATATTAAAG---TTTTTTCTTGTT---------TTTATTAAT---ATGATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGATGTTGTCATATGTGGT----------CAGTTCTTTTACAAATATTCTTCAACGT-TTTTCTCTTTGGCCCTTAATGATATAAGAAAACTTCCAA-AAACTG---TATGTTTTTTAGTGTT--TTGGAGTTTTATTGTTTATTTAA i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3771957 368 + 4876863 TTTTTTTCTTGAATAAGGTAGTTTA-------------CA-TA-TTAAATTCTTCGCTAAAGATACAGCTCTTAAATTAAAAAA----TACTACTACTACTACCATTTTGCTTTAGTCAGTAAGTTCTGCCTTAATTT---TGTCTATTTTATATA-TTTTGTCTA---TTTTTTGATATATTAAAG---TTTTTTCTTGTT---------TTTATTAATATGATGATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGATGTTGTCATATGTGGT----------CAGTTCTTTTACAAATATTCTTCAACGT-TTTTCTCTTTGGCCCTTAATGATATAAGAAAACTTCCAA-AAACTG---TATGTTTTTTAGTGTT--TTGGAGGTTTATTGTTTATTTAA i gorGor5.CYUI01015356v1 I 3 C 0 s nomLeu3.chr7b 112657485 374 + 115148730 TTTTTTCCTTGAATAAGGTAGTTTA-------------CT-TT-TTAAATGCTTCCCTAGAGATACAGCTCTTGAATTAAAAAA----TACTACTATTACTACCATTTTGCTTTAGTCACTAAGTTCTGCCTTAATTT-TCTGTCAATTTTATATATTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTCTTGTT---------TTTATTAATATGATTATTTAAGGCTCTAG-ATTTCTTCTGAGTGCAGATC----------------------TACTTGGGTCATACAGATGTTGTCATATGTGGT----------CAGTTCTTTTACAAATATTCTTCAACGT-TTTTCTCTTTGGCCCTTAATGATATAAGAAAACATCCAATGTTTTG---GATGTTTTATTGTGTT--TTGGAGTTTTATCGTTTATTTAA i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 188941092 365 + 190429646 TTTTTCTCTTGAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCTAAAGATGCAGCTCTTGAATTAAAAAG----TACTACTACTACTACCATTTTGCTTTAATCACTAAGTTCTGCCTTGATTTTTTTGTC----TTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTCTTGTT---------TTTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGAAGTTTTCATATGTGGT----------CA---GTTTTACAAATA---TTCAACGT-CTTTCTCTTTGGCCCTTAATGATACAAGAAAACTTTCAA-AAACTG---TATGTTTTATAGCGTT--TTGGAGTTTTAATGCTTATTTAA i rheMac8.chr5 I 470 C 0 s macFas5.chr5 187888555 392 + 189454096 TTTTTTCCTTCAATAAGGTAGTTTA-------------CT-TATTTAAATTCTTCCGAAAAGATACAGCTCTTGAATTAAAAAG----TACTACTACTACTACCATTTTGCTTTAGTCACTAAGTTCTGCCTTTATTTTTTTGTCTGTTTTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTC---TT---------TTTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATCTACCTGGGTCATACAGAAGTTTTACCTGGGTCATACAGAAGTTTTCATATGTGGT----------CAGTTGTTTTACAAATA---TTCAACGT-CTTTCTCTTTGGCCCTTAATGGTATAAGAAAACTTTCAA-AAACTG---TATGTTTTATAGCGTT--TTGGAGTTTTAATGCTTATTTAA i macFas5.chr5 I 3 C 0 s macNem1.NW_012013133v1 24266606 365 - 25927173 TTTTTCTCTTGAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCTAAAGATGCAGCTCTTGAATTAAAAAG----TACTACTACTACTACCATTTTGCTTTAATCACTAAGTTCTGCCTTGATTTTTTTGTC----TTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTCTTGTT---------TGTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGAAGTTTTCATATGTGGT----------CA---GTTTTACAAATA---TTCAACGT-CTTTCTCTTTGGCCCTTAATGATACAAGAAAACTTTCAA-AAACTG---TATGTTTTATAGTGTT--TTGGAGTTTTAATGCTTATTTAA i macNem1.NW_012013133v1 I 470 C 0 s cerAty1.NW_012001672v1 3305935 372 + 4669795 TTTTTCTCTTGAATAAGGTAGTGTA-------------CT-TA-TTAAATTCTTCCCAAAAGATACAGCTCTTGAATTAAAAAG----TACTACTACTACTACCATTTTGCTTTAGTCTCTAAGTTCTGCCTTTATTTTTTTGTCTGTCTTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTCTTGTT---------TGTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTAAGTGCAGATC----------------------TGCCTGGGTCATACAGAAGTTTTCATATGTGGT----------CAGTTGTTTTACAAATA---TTCAACGT-CTTTCTCTTTGGCCCTTAATGATACAAGAAAACTTTCAA-AAACTG---TATGTTTTATAGCGTT--TTGGAGTTTTAATGCTTATTTAA i cerAty1.NW_012001672v1 I 470 C 0 s chlSab2.chr7 134265019 371 + 135778131 TTTTTCTCTTGAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCTAAAGATACAGCTCTTGAATTAAAAAG----TACTACTACTACTAGCATTTTGCTTTAGTCACTAAGTTCTGCCTTTATTTTTTTGTCTGTTTTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG--TTTTTTTCTTGTT---------TTTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGAAGTTTTCATATGTGGT----------CAGTTGTTTTACAAATA---TTCAACGT-CTTTCTCTTTGGCCCTTAACGATATAAGAAAACTTTCAA-AAACTG-----TGTTTTATAGCGTT--TTGGAGTTTTAATGCTTATTTAA i chlSab2.chr7 I 470 C 0 s manLeu1.NW_012102221v1 2698333 366 - 2847728 TTTTTTTCTTCAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCAAAAGATACAGCTCTTGAATTAAAAAG----TACTACTACTACTACCATTTTGCTTTAGTCACTAAGTTCTGCCTTTATTTTTTTGTCTGTCTTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TTTTTTCTTGTT---------TGTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAGTGCAGATC----------------------TACCTGGGTCATACAGAAGTTTTCATATGTGGT----------CAGTTGTTTTACAAATA---TTCAACG-------TTTTTGGCCCTTAATGATACAAGAAAACTTTCAA-AAACTG---TATGTTTTGTAGCGTT--TTGGAGTTTTAATGCTTATTTAA i manLeu1.NW_012102221v1 I 474 C 0 s colAng1.NW_012116221v1 824764 372 + 2368649 TTTTTCTCTTGAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCTAAAGATACAGCTCTTGAATTAAAACG----TACTACTACTACTACCATTTTGCTTTAATCACTAAGTTCTGCCTTGGTTTTTTTGTCTGTTTTTTATGTTTTTGTCTATATTTTGTTGATATTTTAAAG---TATTTTCTTGTT---------TTTATTAATATGATTATTTAAGGCTCTAGAATTTCTTCTGAATGCAGATC----------------------CACCTGGGTCATACAGAAGTTTTCGTATGTGGT----------CAGTTGTTTTACAAATA---TTCAACGT-CTTTCTCTGTGGCCCTTAATGATATAAGAAAACTTTCAA-AAACTG---TATGTTTTATAGCCTT--TTGGAGTTTTAATGCTTATTTAA i colAng1.NW_012116221v1 I 470 C 0 s calJac3.chr3 189576963 307 - 190850796 TGTATTTCTTGAATAAGGTAATTTA-------------CT-TG-TTGGATTCTTCCCCAAAGATGCAGCTCTTGAATTTAACAA----TACTGCTGCTATT--------------------------------AATGC--TCTTTTGTTTTTTATAATTTTGTCTGTATTTTGTTGATATTTTCAAG----TTTTTCTTGTT---------TCTGTTCATATGATTATTTAGGGCTCTAG-------------TGCAGATG----------------------TGAGTGGATCAGACAGATATTTCCATCTCTGGT----------CAGTTCTTCTAAAAATATTCTTCGACGC-TTTTCTCCTCGGCCCTTAATGATAAAAGAAAACTTTCAA-AAAC-------------------------GATGTTTTATTGTCTATTTGA i calJac3.chr3 I 1 C 0 s cebCap1.NW_016107886v1 952443 338 - 2196201 TTT-TTTCTTGAATAAGGTAGTTTA-------------CT-TA-TTAAATTCTTCCCCAAAGATACAGCTCTTGAATTAAAAAA----TACTGCCAGTACTACCGTTTTGCTTTAGTCACTAAGTTCTGCCTGAATGC--TTTTTTGTTTTTTACACTTTTGTCTATATTTTGTTGATATTTTCAAG----TTTTTCTTGTT---------TTTGTTAATATGATTATTTAGGGCTCTCG-------------TGCAGATT----------------------TACCTGGATCATACAGATGTTTCCACATGCGGT----------CAGTTCTTCTAAAAATATTCTTCGATGC-TTTTCTCCTTGGCCCTTTATGATAAAAGAAAACTTTCAC-AAAC-------------------------GATGTTTTATTGTTTATTTAA i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3348711 335 - 5030052 TTTTTTTCTTGCATAAGGTAGTTTA-------------CT-TA-TTAGATTCTTCCCCAAAGATACAGCTCTTGAATTAAACAA----TACTGCTACTACTGCCACTTTGCTTTAGTCACTAAGTTCTGCCTTAATAC--TTTTTTGTTTTTTATACTTTTGTCTATATTTTGTTGATATTTTCAAG----TTTTTCTTGTT---------TTTGTTAATATGATTATTTAGGTCTCTAG-------------TGCAGATC----------------------GACCTGGATCAGACAGATGTTTCCATATGCGGT----------CAGTTCCTCTAAAAATATTCTTTGACGC-TTTTCTCCTTGGCCCTTAATGATAAAAGAAAACTTTCAA-AAAC-------------------------GATGTTTTATTG----TTTAA i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 16888014 388 - 59632846 TAGATTTTCTGAATAAGGCAGCTAGAAGGTTTGTTGATTT-CA-TTAAATT-TCCCCCAAAGAAACAGTCTTCGAATTAAAAAAAAAAAAAAAAGAACGCATTTATTTTACTTTAGTTATTAAG-TCTACTTTAATTT-TTCTTCTGTTTTAT----TTTCTCCTATGTTTTGATGATATTTTAAACATATTTTTTCTTGTT---------TTTGTTAGTCGAATTA--TATGGCTATGACATTTCT--TGAGGGCAGATC----------------------TGCCTTTATCTTAAAGTCTTTTT--TGTGCAGT-------TTATATTTCTTTTAAAGACA---TTTAGCTTGTTTTCTCTTTGACTTTTAATTATATAAGAAAACTTTTCA-AAAAAGATCTATGTTTTATAGTATTTATTGGAGCTTTATTATTTTCATAT i canFam3.chr16 I 7 C 0 s dasNov3.JH570353 1396502 370 - 2520184 TTTTGTTCTTGAGT------TTCTA-------------TTGCA-TTAGATTTCCCCCCAAAGAAACAGTCTTTGATTTAAAAA-----TATTGATAATGCTACcctttttatt------ataatttctgcttttattt------------tccttattttcttctacattttgttaatattttaaag---ataacttttgttcccttttcctttgttagtgtgattatttaagac--tgaaatgtcttctgagtgcagatt----------------------tatgtgtatcgtatagatttttaaatatctatttttcatattatacttcattccaagatgttctccatctg-ttttctctttggtccttagtgatgcaaggtaagttgttt-agaaaa---tatgtcttataatgtttgttggggttttattgttttcttag i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86522781 2772 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=963968.000000 s hg38.chr4_KI270789v1_alt 60377 119 + 205944 TTTCACTGCA-TCTTAATCAAATAA------------------------------TTAAAA-ATGCTTTTTAGAAATTACTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATCAAAA---AAAAA-----A-------GCATTCTATATTT s panTro5.chr4 192851538 121 + 194502333 TTTCACTGCA-TCTTAATCAAATAA------------------------------TTAAAA-ATGCTTTTTAGAAATTACTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTATGGAATCAAAA---AAAAAAG---A-------GCATTCTATATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735773 120 + 195804263 TTTCACTGCA-TCTTAATCAAATAA------------------------------TTAAAA-ATGCTTTTTAGAAATTACTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTATGGAATCAAAA---AAAAA-G---A-------GCATTCTATATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772325 120 + 4876863 TTTCACTGCA-TCTTAATCAAATAA------------------------------TTAAAA-ATGCTTTTTAGAAATTACTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATAAAAA---AAAAA-G---A-------GCATTCTATATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657859 117 + 115148730 TTTCACTGCA-TCTTCATTAAAGAA------------------------------TTAAAA-ATAGTTTTTAGAAATTACTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATCTGAA---AAAAG--------------CATTCTATATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188941457 121 + 190429646 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TAAAAAAATAGTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATCTGAA---GAAAA-A---A-------GCATtctatattt i rheMac8.chr5 C 0 I 151 s macFas5.chr5 187888947 125 + 189454096 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TGAAAAAATATTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAAGTATATAG----TCTTTTTT------ATGATCTGTGGAATCTGAA---GAAAA-AAG-A-------GCATTCtatattt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24266971 121 - 25927173 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TAAAAAAATAGTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATCTGAA---GAAAA-A---A-------GCATTCtatattt i macNem1.NW_012013133v1 C 0 I 145 s cerAty1.NW_012001672v1 3306307 121 + 4669795 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TAAAAAAATAGTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATTTGAA---GAAAA-A---A-------GCATTCtatattt i cerAty1.NW_012001672v1 C 0 I 235 s chlSab2.chr7 134265390 118 + 135778131 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TAAAAATATATTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAA--AT---G----TCTTTTTT------ATGATCTGTGGAATCTGAA---GAAAA-A---A-------GCATTCtatattt i chlSab2.chr7 C 0 I 145 s manLeu1.NW_012102221v1 2698699 121 - 2847728 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TAAAAAAATAGTTTTTAGAAATCATTGAAGTT-TTGTGGTCTGAA--ATATAG----TCTTTTTT------ATGATCTGTGGAATTTGAA---GAAAA-A---A-------GCATtctatattt i manLeu1.NW_012102221v1 C 0 I 157 s colAng1.NW_012116221v1 825136 120 + 2368649 CTTCACTGCA-TTTTAATTAAAGAA------------------------------TGAAAAAATATTTTTTAGAAATCACTGAAGTT-TTGTGGTCTGAA--ATATAG----TC-TTTTT------ATGATCTGTGGAATCTGAA---GATAA-A---A-------GCATTCtatattt i colAng1.NW_012116221v1 C 0 I 157 s calJac3.chr3 189577270 122 - 190850796 TTTCATTGCA-TTTTAATTCAAGAG------------------------------TTAAAAAATGCGTTTTAGAAATCACTGAAGTT-TTATGGTCTAAA----ATAG----TCTTTTTC------ATGCTCTGCGGAATCTGAAAATAAAAA-G---A-------GCGCTCTATATTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 952781 124 - 2196201 TTTCATTGCA-TTTTAATCAAAGAG------------------------------TTAAAAAATGCTTTTTAGAAATCACTGAAGTT-TTATGGTCTGAA--ATATAG----TCTTTTTC------ATGCTCTGTGGAATCTGAAAATAAAAA-G---A-------GCGTTCTATGTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349046 124 - 5030052 TTTCATTGCA-TTTTAATCAAAGGG------------------------------TTAAAAAATGCTTTTTAGAAATCACTGAAGTT-TTATGGTCTGAA--ATACAG----TCTTTTTC------ATGCTCTGTGGAATCTGAAAATGAAAA-G---A-------GCGTTCTATATTT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86525553 146 - 129401213 TCTCACTGTA-TCTTATTAAAAAAACTTTTGCCTTTGTTTCTAGTTT-TGTTTTGTTAAAG----TTTCTCAGAAGCTGAAGATATT-TTGTGGTT--GA--ACACTG----ATCTTTCT------ATGGTTTTTGAGCATTGAA-ATAAAAA-G---G-------GCCTTCTGTATTT i mm10.chr8 I 2772 C 0 s canFam3.chr16 16888402 147 - 59632846 -CTCCATGCA-TTTTAATTAGGGAA--------------CATTGTGT-TTTTTGTTTGTTTTTTATTCTTTGGAAATCATTGTAGTTCTTATGATTTGAA--ATATGGTTTATCTTTTTA------ATGGTCTGTGGATTCTTTG---GGGAA-G---ATGGGTTGGCATTCCATATAT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1396872 141 - 2520184 -cttatcatatttttaattgtaaaa--------------tattatttgtgcacttttaaca------ttttggcaattattgaagtttttaaggtttgaa--atgtag----tcaatttttaaaaaatcatctctagatgcttga---aaaaa-atgag-------gtatattaaattt i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=13409.000000 s hg38.chr4_KI270789v1_alt 60496 3 + 205944 TTA s panTro5.chr4 192851659 3 + 194502333 TTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735893 3 + 195804263 TTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772445 3 + 4876863 TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657976 3 + 115148730 TTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187889072 3 + 189454096 ata i macFas5.chr5 C 0 I 147 s calJac3.chr3 189577392 3 - 190850796 TTA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 952905 3 - 2196201 TTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349170 3 - 5030052 TTA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86525699 3 - 129401213 TTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16888550 3 - 59632846 TTA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1397013 3 - 2520184 tta i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=99061.000000 s hg38.chr4_KI270789v1_alt 60499 32 + 205944 AGGTGCCA-AGTTTGTTATCTGTCAATTAGAGA s panTro5.chr4 192851662 32 + 194502333 AGGGGCCA-AGTTTGTTATCTGTCAATTAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735896 32 + 195804263 AGGGGCCA-AGTTTGTTATCTGTCAATTAGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772448 32 + 4876863 AGGTGCCA-AGTTTGTTATCTGTCAATTAGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112657979 32 + 115148730 AGGTGCCA-AGTTTGTTATCTATCAATTAGAGA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189577395 32 - 190850796 AGGCGCCG-AGTGTGTTATCTATCAGTTAGAGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 952908 32 - 2196201 AGGTGCCA-AGTTTGTTATCTACGAATTAGAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349173 32 - 5030052 AGGTGCCA-AGTTCGTTATCTATCAATTAGAGA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86525702 31 - 129401213 ACGTGACA-A-CTTGGTGTCTCTCAGAAAGAGA i mm10.chr8 C 0 I 1129 s canFam3.chr16 16888553 29 - 59632846 AGGTGCCACAGTTTGGTGTCTGTCAATTA---- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397016 31 - 2520184 gggtacca-gatttggtatctatta-ttagaga i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e macFas5.chr5 187889075 147 + 189454096 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=110648.000000 s hg38.chr4_KI270789v1_alt 60531 65 + 205944 ----AAACTATGTGATTTACATTTTTACATCATGACTTACTATTGCTCTCTTCAGCAGTCACAGCCT--GA s panTro5.chr4 192851694 65 + 194502333 ----AAACTATGTGATTTACATTTTTACATCATGACTTACTATTGCTCTCTTCAGCAGTCACAGCCT--GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735928 65 + 195804263 ----AAACTATGTGATTTACATTTTTACATCATGACTTACTATTGCTCTCTTCAGCAGTCACAGCCT--GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772480 65 + 4876863 ----AAACTATGTGATTTACATTTTTACATCATGACTTACTATTGCTCTCTTCAGCAGTCACAGCCT--GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658011 65 + 115148730 ----AAACGATGTGATTTACATTTTTACATTATCACTTACTTTTGCTCTCTTCAGCAGTCACAGCCT--GA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189577427 63 - 190850796 ----AACCCACGTGAGTTTCATTTTGACATGGTGCCTCCTTTTTGCTGTCTTCAGCAGCCACAGCCT---- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 952940 62 - 2196201 ----AAACTGTGTGATTTTCGTTTTGACATCGTTACTCC-TCTTGCTGTCTTCAGCAGCCACAGCCT---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349205 65 - 5030052 ----AAACGGCGTGATTTTTGTTTTGACATCATTACTCCTTTTTGCTGTCTTCAGCAGCCACAGCCTGA-- i aotNan1.NW_018492112v1 C 0 I 53 s canFam3.chr16 16888582 48 - 59632846 ----------TGTTATTTG-GTTTTCATAGCATATTTT----TGGCTTTCTTTGGCAGTCTAA-------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397047 69 - 2520184 aacctaattaggtcatgtaggtttttatgtctttaccaatttttcatcctctttaatgtcatagtct--ga i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e macFas5.chr5 187889075 147 + 189454096 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=35166.000000 s hg38.chr4_KI270789v1_alt 60596 23 + 205944 TAGAGGTGATGTAATTTTCCCTG s panTro5.chr4 192851759 23 + 194502333 TAGAGGTGATGTAATTTTCCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192735993 23 + 195804263 TAGAGGTGATGTAATTTTCCCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772545 23 + 4876863 TAGAGGTGATGTAATTTTGCCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658076 23 + 115148730 TAGAAGTGATGTAATTTTCCCTG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189577490 21 - 190850796 --GAGGAGGTGCGGTTTTCCCTG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 953002 20 - 2196201 --GACGAGGTGTGATTTTCCCT- i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16888630 17 - 59632846 TGAAGGTGATTTAATTT------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397116 22 - 2520184 taaaagcaatttattttctcct- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e macFas5.chr5 187889075 147 + 189454096 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=18545.000000 s hg38.chr4_KI270789v1_alt 60619 16 + 205944 CTGTGCTCCTGTGTCT s panTro5.chr4 192851782 16 + 194502333 CTGTGCTCCTGTGTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736016 16 + 195804263 CTGTGCTCCTGTGTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772568 16 + 4876863 CTGTGCTCCTGTGTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658099 10 + 115148730 CTGTGCTC------CT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187889222 16 + 189454096 CTGTAGatctgtatct i macFas5.chr5 I 147 C 0 s calJac3.chr3 189577511 10 - 190850796 CCGGGCCCCT------ i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 953022 16 - 2196201 CTGTGCTCCTGTGTCT i cebCap1.NW_016107886v1 C 0 I 28 s canFam3.chr16 16888647 11 - 59632846 -----CTCCTACGGCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397138 5 - 2520184 -----------tatct i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1757.000000 s hg38.chr4_KI270789v1_alt 60635 1 + 205944 G s panTro5.chr4 192851798 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736032 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772584 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658109 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187889238 1 + 189454096 a i macFas5.chr5 C 0 C 0 s calJac3.chr3 189577521 1 - 190850796 G i calJac3.chr3 C 0 C 0 s canFam3.chr16 16888658 1 - 59632846 G i canFam3.chr16 C 0 I 34 s dasNov3.JH570353 1397143 1 - 2520184 a i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=20503.000000 s hg38.chr4_KI270789v1_alt 60636 21 + 205944 TGTCTTTCCTTATGCATGCTC s panTro5.chr4 192851799 21 + 194502333 TGTCTTTCCTTATGCATGCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736033 21 + 195804263 TGTCTTTCCTTATGCATGCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772585 21 + 4876863 TGTCTTTCCTTATGCATGCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658110 21 + 115148730 TGTCTTTCCTTATGCATACTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187889239 16 + 189454096 tatctatatctata-----tc i macFas5.chr5 C 0 C 0 s calJac3.chr3 189577522 21 - 190850796 TGACTTTCCGTCTGCATGCCG i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1397144 7 - 2520184 -------------acatgct- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=681.000000 s hg38.chr4_KI270789v1_alt 60657 27 + 205944 TACtttttttttttttttttttttttt s panTro5.chr4 192851820 26 + 194502333 TAC-ttttttttttttttttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736054 21 + 195804263 -AC-tttttttttttttttttgt---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772606 22 + 4876863 TAC-ttttttttttttttttttt---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658131 13 + 115148730 CAC-tttttttttt------------- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187889255 20 + 189454096 tat-atctatatctatatATA------ i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1397151 10 - 2520184 -----tttgcatttt------------ i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189577543 0 - 190850796 C e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 825256 157 + 2368649 I e manLeu1.NW_012102221v1 2698820 157 - 2847728 I e chlSab2.chr7 134265508 145 + 135778131 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e macNem1.NW_012013133v1 24267092 145 - 25927173 I e rheMac8.chr5 188941578 151 + 190429646 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=182716.000000 s hg38.chr4_KI270789v1_alt 60684 45 + 205944 ttttgagacggaatcttgctgtgtcgcgcaggctggagtgcagtg s panTro5.chr4 192851846 45 + 194502333 ttttgagacagaatcttgctgtgtcgccaaggctggagtgcagtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736075 40 + 195804263 -----agacagaatcttgctgtgtcgcccaggctggagtgcagtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772628 45 + 4876863 ttttgagacagaatcttgctgtgtcgcccaggctggagtgcagtg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658144 41 + 115148730 ----gagacggaatcttgctgtgtcacccaggctggagtgcagtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188941729 45 + 190429646 ttttgaggcagagtcttgctctgttgcccagggtggagtgcagtg i rheMac8.chr5 I 151 C 0 s macFas5.chr5 187889275 45 + 189454096 ttttgaggcagagtcttgctcttccgcccagggtggagtgcagtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267237 45 - 25927173 ttttgaggcagagtcttgctctgttgcccagggtggagtgcagtg i macNem1.NW_012013133v1 I 145 C 0 s chlSab2.chr7 134265653 45 + 135778131 ttttgaggcagagtcttgctctgttgctcagggtggagtgcagtg i chlSab2.chr7 I 145 C 0 s manLeu1.NW_012102221v1 2698977 45 - 2847728 ttttgaggcagagtcttgctctgtcgcccagggtggagtgcagtg i manLeu1.NW_012102221v1 I 157 C 0 s colAng1.NW_012116221v1 825413 45 + 2368649 ttttgaggcagagtcttgctctgtcacccaggctggagtgcagtg i colAng1.NW_012116221v1 I 157 C 0 s dasNov3.JH570353 1397161 12 - 2520184 ctttga---------------------------------acagtg i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189577543 0 - 190850796 C e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=375722.000000 s hg38.chr4_KI270789v1_alt 60729 84 + 205944 gcgcgatcctggctcactgcgagctctgcctcccaggttcatgcca-tttcctgcctcagcctccggagtagctgggactacagg s panTro5.chr4 192851891 85 + 194502333 gcgcgatctcggctcactgcgagcgctgcctcccaggttcatgccattttcctgcctcagcctcctgagtagctgggactacagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736115 85 + 195804263 gcgcgatctcggctcactgcgagctctgcctcccaggttcatgccattttcctgcctcagcctcctgagtagctgggactacagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772673 85 + 4876863 gtgcgatctcggctcactgagagctctgcctcccaggttcatgccattttcctgcctcagcctcctgagtagctgggactaaagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658185 85 + 115148730 gctcggtctcggctcaccgcaacctccgcctcccaggttcacaccagtctcctgcctcagcctcccgagtagctgggactacagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188941774 85 + 190429646 gtgtgatctcggctccctgcaagctccgcctcccaggttcatgccattctcatgcctcaggctcctgagtagctgggactacagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889320 85 + 189454096 gtgtgatctcggctcactgcaagctccgcctcccaggttcatgccattctcctgcctcaggctcctgagtagctgggactacagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267282 85 - 25927173 gtgtgatctcggctccctgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaag i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134265698 85 + 135778131 gtgtgatctcagctcactgcaagctccgccccccgggttcccgccattctcctgcctcagcctcctgagtagctgggactacagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699022 85 - 2847728 gtgtgatctcggctcactgcaagctccgcttcccgggttcatgccattctcctgcctcagcctcctgagtagctgggactacagg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825458 84 + 2368649 gtgcgatctcagctcactgcaagctctgcctcccgggttcatgcc-ttctcctgcctcagcctcctgagtagctgggactacagg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189577543 0 - 190850796 C e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1397173 0 - 2520184 C e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e cerAty1.NW_012001672v1 3306428 235 + 4669795 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=799147.000000 s hg38.chr4_KI270789v1_alt 60813 153 + 205944 cgcccgccaccatgcctggctaa-ttttttttatttttagtagagacgggctttcaccatgttagccagcatggtcttgatctcctgatctcgtgatccgcccacctcggcctcccaaagttctgggattacaggcgtgagccaccgcgcccgg s panTro5.chr4 192851976 153 + 194502333 cgcccgccaccacgcctggctaa-ttttttttatttttagtagagacgggctttcaccatgttagccaggatggtcttgatctcctgatcttgtgatccgcccaccttggcctcccaaagttctgggattacaggcgtgagccaccgcgcccag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736200 153 + 195804263 cgcccgccaccacgcctggctaa-ttttttttatttttagtagagacgggctttcaccatgttagccaggatggtcttgatctcctgatcttgtgatccgcccaccttggcctcccaaagttctgggattacaggcgtgagccaccgcgcccag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772758 153 + 4876863 cgcccgccaccacgcctggctaa-ttttttttatttttagtagagacgggctttcaccatgttagccaggatggtcttgatctcctgatgtcgtgatccgcccaccttggcctcccaaagttctgggattacaggcgtgagccaccgcgcccag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658270 154 + 115148730 cgcctgccaccaagcccagctaatttttttttatttttagtagagatgggctttcattgtgttagccagaatggtcttgatctcctgacctcatgatccgcgcacctcggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188941859 153 + 190429646 tgcctcccaccacgcccggctaa-ttttttgtatttttagtagagacggggtttcactgtgttagccagggtggtcttgatctcctgacctcgtgatccgcccgcctcagcctcccaaagtgctggggttacaggtgtgagccactgcacccgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889405 153 + 189454096 tgcctgccaccatgcccggctaa-ttttttgtatttttagtagagacggggtttcactgtgttagccagggtggtcttgatctcctgacctcgtgatccgcccgcctcagcctcccaaagtgctggggttacaggtgtgagccactgcacccgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267367 150 - 25927173 cgc---ccaccgcgcccggctaa-ttttttgtatttttagtagagacggagtttcaccgtgttagccaggatggtcttgatctcctgacctcatgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccactgcgcccag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306663 153 + 4669795 cgcccgccaccacgcccggctag-ttttttgtatttttagtagagacggaatttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgtgagccactgcgcccag i cerAty1.NW_012001672v1 I 235 C 0 s chlSab2.chr7 134265783 143 + 135778131 ca-ccgcaaccatgcctggctac-ttttttgtatttttagtagagacggagtttca---------ccagggtggtcttgatctccggaccttgtgatccgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699107 153 - 2847728 cgcccgccaccatgcccggctaa-ttttttgtattttcagtagagacagagtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatctgcccgcctcggcctcccaaagtgctggcattacaggtgtgagccactgcgcccag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825542 153 + 2368649 cgcctgccaccatgcctggctaa-ttttttgtatttttagtagagacggggtttcactgtgttaaccagggtggtcttgatctcctgacctcgtgatctgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccgg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189577543 0 - 190850796 C e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1397173 0 - 2520184 C e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=14028.000000 s hg38.chr4_KI270789v1_alt 60966 2 + 205944 cc s panTro5.chr4 192852129 2 + 194502333 cc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736353 2 + 195804263 cc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772911 2 + 4876863 cc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658424 2 + 115148730 cc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942012 2 + 190429646 cc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889558 2 + 189454096 cc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267517 2 - 25927173 cc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306816 2 + 4669795 cc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134265926 2 + 135778131 cT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699260 2 - 2847728 cc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825695 2 + 2368649 cc i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1397173 2 - 2520184 cc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189577543 0 - 190850796 C e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=14976.000000 s hg38.chr4_KI270789v1_alt 60968 2 + 205944 TA s panTro5.chr4 192852131 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736355 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772913 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658426 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942014 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889560 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267519 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306818 2 + 4669795 TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134265928 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699262 2 - 2847728 TA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825697 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189577543 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1397175 2 - 2520184 ta i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e aotNan1.NW_018492112v1 3349270 53 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=25528.000000 s hg38.chr4_KI270789v1_alt 60970 4 + 205944 CTtt s panTro5.chr4 192852133 4 + 194502333 CTtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736357 4 + 195804263 CTtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772915 4 + 4876863 CTtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658428 4 + 115148730 CTtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942016 4 + 190429646 CTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889562 4 + 189454096 CTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267521 4 - 25927173 CTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306820 3 + 4669795 C-TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134265930 4 + 135778131 CTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699264 3 - 2847728 C-TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825699 4 + 2368649 CTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189577545 4 - 190850796 CTTT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3349323 4 - 5030052 CTtt i aotNan1.NW_018492112v1 I 53 C 0 s dasNov3.JH570353 1397177 4 - 2520184 cttt i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16888659 34 - 59632846 I e mm10.chr8 86525733 1129 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=56379.000000 s hg38.chr4_KI270789v1_alt 60974 6 + 205944 ttgttt s panTro5.chr4 192852137 6 + 194502333 ttgttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736361 6 + 195804263 ttgttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772919 6 + 4876863 ttgttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658432 6 + 115148730 ttgttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942020 6 + 190429646 TTGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889566 6 + 189454096 TTGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267525 6 - 25927173 TTGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306823 6 + 4669795 TTGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134265934 6 + 135778131 TTGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699267 6 - 2847728 TTGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825703 6 + 2368649 TTGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189577549 6 - 190850796 CTGCTC i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3349327 6 - 5030052 ctgctt i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16888693 6 - 59632846 TTGTTT i canFam3.chr16 I 34 C 0 s dasNov3.JH570353 1397181 6 - 2520184 ttgttc i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 953038 28 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=2062376.000000 s hg38.chr4_KI270789v1_alt 60980 225 + 205944 taagaacattgatgctctgttatttaatctctagaattcataactggcatatcttcattgtgaatCACACGCTTA-TTTTTTCTTTTCTGCTACTTTTTCTTACTTCTATGCT-------TTTTCTGCCCTGTGTTTTAAAGAGAAGAAAATCAGTGATGCCACACAAAACACTC---------CGTGGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTAGTGCTGACATTCTGTTCCC s panTro5.chr4 192852143 225 + 194502333 taagaacattgatgctctgttatttaatctctagaattcataactggcatatcttcattgtgaatCACACACTTA-TTTTTTCTTTTCTGCTCCTTTTTCTTACTTCTATGCT-------TTTTCTGCCCTGTGTTTTAAAGAGAAGAAAATCAGTGATGCCATACAAAACACTC---------CGTGGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTAGTGCTGACATTCTGTTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736367 225 + 195804263 taagaacattgatgctctgttatttaatctctagaattcataactggcatatcttcattgtgaatCACACACTTA-TTTTTTCTTTTCTGCTTCTTTTTCTTACTTCTATGCT-------TTTTCTGCCCTGTGTTTTAAAGAGAAGAAAATCAGTGATGCCATACAAAACACTC---------CGTGGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTAGTGCTGACATTCTGTTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3772925 225 + 4876863 taagaacattgatgctctgttatttaatctctagaattcataactggcatatcttcattgtgaatCACACACTTA-TTTTTTCTTTTCTGCTCCTTTTTCTTACTTCTATGCT-------TTTTCTGCCCTGTGTTTTAAAGAGAAGAAAATCAGTGATGCCATACAAAACACTC---------CGTGGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTAGTGCTGACATTCTGTTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658438 225 + 115148730 taagaacattgatgctgtgttatttaatctctagaattcataactggcatatctttattgtgaatCACATACTTA-TTTTTTCTTTTCTGCTCCTTTTTCTTACTTCTATGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCGCACAAAACCCTC---------CGTAGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTAGTGCTGACATTCTGTTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942026 224 + 190429646 TAAGAGCACTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGCATATCTTCATTGTGAATCACACACTTA-ATTTTTCTTTTCTGTT-CTTTTTCTTTCTTCTGTGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCACACAAAACACTC---------CGTAGTAGTCAGATCACAGC------AATGGTTTTAACATTTGTGGTGCTGACATTCTGTTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889572 219 + 189454096 TAAGAGCACTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGCATATCTTCATTGTGAATCACACACTTA-ATTTTTCCTTT------CTTTTTCTTTCTTCTGTGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCACACAAAACACTC---------CATAGTAGTCAGATCACAGC------AATGGTTTTAACATTTGTGGTGCTGACATTCTGTTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267531 225 - 25927173 TAAGAGCACTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGCATATCTTCATTGTGAATCACACATTTA-Atttttcttttctgttcctttttcttacttctgtgct-------ttttctGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCATACGAAACACTC---------CGTGGTAGTCAGATCACAGC------GATAGTTTTAACATTTGTGGTGCTGACCTTCTGTTCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3306829 225 + 4669795 TAAGAGCACTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGTATATCTTCATTGTGAATCACACACTTA-ATTTTTCTTTTCTGTTCCTTTTTCTTACTTCTGTGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCACACAAAACACTC---------TGCAGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTGGTGCTGACCTTCTGTTCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134265940 225 + 135778131 TAAGAGCATTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGCATATCTTAATTGTGAATCACACACTCA-ATTTTTCTTTTCTGTTCCTTTTTCTTTCTTCTGTGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCACACAAAACACTC---------CGTAGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTGGTGCTGACATTCTGTTCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699273 225 - 2847728 TAAGAGCACTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGTATATCTTCATTGTGAATCACACACTTA-ATttttcttttctgttcctttttcttacttctgtgct-------tttTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCACACAGAACACTC---------CGTAGTAGTCAGATCACAGC------GATGGTTTTAACATTTGTGGTGCTGACATTCTGTTCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825709 225 + 2368649 TAAGAGCATTGATGTTCTGTTATTTAATCTCTACAGTTCATAACTGGCATGTCTTCGTTGTGAATCACACACTTA-ATTTTTCTTTTCTGTTCCTTTTTCTTACTTCTGTGCT-------TTTTCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGATGCCGCACAAAACACTC---------TGTAGTAGTCAGATCACAGC------GATGGTGTTAACATTTGTGGTGCTGACATGCTGTTCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189577555 223 - 190850796 TAAGAACTTCGAAGCTCTGCTGTGTAATCTCCAGAATCCGTAACTGCTGTATCTTCTTTGTAAATCATG--CTTACTTTTTTCTTTTCTGCTCCTTTTTCTTACTTCTGTGCT-------CTTCCTGCCCAGTGTACTAAAGGGAGGAAAATCAGTGACGCCACACAAAACACTC---------CGTGGTGGTCAGGTCGCAGC------GATGGTTCGAG-GTGTGTAGTGCTGACACTCTGGTCCT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 953066 223 - 2196201 TAAGAACATGGATGTTCTGCCACTCAATCCCTAGAATTGGTAACCGGCATGTCTTCATGGCAAATCACA--CTTA-TTTTTTCTTTTCTGCTCCTTTTTCTTACTTCTGTGCT-------CTTCCTGCCCTGTGTATTAAAGAGAAGGAAATCGGTGACGCCACACAAAACACTC---------AGTAGGAGTCAGGTCGCAGC------GATGGTGTGAACGTCTGTCGTGCTGAGGTTCTGTTCCT i cebCap1.NW_016107886v1 I 28 C 0 s aotNan1.NW_018492112v1 3349333 223 - 5030052 taagaacattgatgctgtgctatttaatccctagaattcgtaactggcatatcttcattgtaaatCACA--CTTA-TTTTTTCTTTTCTGCTTCTTTTTCTTACTTCTGTGCT-------CTTCCTGCCCTGTGTATTAAAGAGAAGAAAATCAGTGACGCCACACAAAACACTC---------CGTAGTAGTCAGGTCACAGC------GACGGTCTGAACATTTGCAATGCTGAGATTCTGTTCCT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16888699 217 - 59632846 TAAGAATGTTGATGCCATGTTATTTGATCTCTAGAATTCATAACTGGTATA----CTTTGTGAATTGCACACTTT-TTC-----------CCCCTCTCATTTTCTTCTGTGCT--------TTTCTACAGT---TACTAAAAATAAGAGAATAAGTGATCCCAGAAAACTCACTCACATTT---TTTATTAGTCATATCACAGCTATACTGATAAGTATAAATGTTATAGTGCTGATATGCTTTTCT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397187 237 - 2520184 taagagtgttgatgctatggtatttaaatgctaaaatttataactggtggatcttcactgtgaattgcacacttA-GCACACTTTTTCT-CTCTTCTTCCTTACTGCAACACTACTTTTTTTTTCTGtcttagctattaaagatgagaaaatcagtgatcccaca-aaatcactcacctttgtctttagtaa--aaatcacagc------tatattttaaaaatttatagttcttacattgtgctact i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86525733 1129 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=3414617.000000 s hg38.chr4_KI270789v1_alt 61205 382 + 205944 GTTCTTGTCTCTTTCA-CTGAG-TTCtcctaccatcaggcaggttccatgctcgtcaccaggc-cctggctgcaacttttcataccctatcaacatttggttcactgatgattgttgtttgctagattttccaagcagttcc-atataaacaatgttcccatatctttgaacattcaaaaatcagtttgtattgcgtttatacttgattgaaataatag-ttggt-ataaaatttccgggttgcactttcttggtgca-aaatttcacaggtctcagctctttcagtattgaatactgctACAC-ACTGCCCTTGTGATTACAGATTCAAGCTGGCCATCAGACTTGCAAGA--CACAGACA-GCTTTAATCTGATGCTACATTTACTGGGCT s panTro5.chr4 192852368 383 + 194502333 GTTCTTGTCTCTTTCA-CTGAG-TTCtcctaccatcaggcaggttccatgcttgtcaccaggctcctggctgcaacttttcataccctatcaacatttggttcactgatgattgttgtttgctagattttccaagcagttcc-atataaacaatgttcccatatctttgaacattcaaaaatcagtttgtattgcgtttatacttgattgaaataatag-ttggt-ataaaatttctgggtttcactttcttggtgca-aaatttcacaggtctcagctctttcagtattgaatactgctACAC-ACAGCCCTTGTGATTACAGATTCAAGCTGGCCATCAGACTTGCAAGA--CACAGACA-GCTTTAATCTGATGCCACATTTACTGGGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736592 383 + 195804263 GTTCTTGTCTCTTTCA-CTGAG-TTCtcctaccatcaggcaggttccatgcttgtcaccaggctcctggctgcaacttttcataccctatcaacatttggttcactgatgattgttgtttgctagattttccaagcagttcc-atataaacaatgttcccatatctttgaacattcaaaaatcagtttgtattgcgtttatacttgattgaaataatag-ttggt-ataaaatttctgggtttcactttcttggtgca-aaatttcacaggtctcagctctttcagtattgaatactgctACAC-ACAGCCCTTGTGATTACAGATTCAAGCTGGCCATCAGACTTGCAAGA--CACAGACA-GCTTTAATCTGATGCTACATTTACTGGGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3773150 383 + 4876863 ATTCTTGTCTCTTTCA-CCGAG-TTCtcctaccatcaggcaggttccatgcttgtcaccaggcccctggctgcaacttttcatagcctatcaacatttcgttcactgatgattgttgtttgctagattttccaagcagttcc-atataaacaatgttcccatatctttgaacattcaaaaatcagtttgtattgcgtttatacttgattgaaataatag-ttggt-ataaaatttctgggtttcactttcttggtgca-aaatttcacaggtctcagctctttcagtattgaatactgctACAC-ACTGCCCTTGTGATTACAGATTCAAGCTGGCCATCAGACTTGCAAGA--CACAGACA-GCTTTAATCTGATGCCACATTTACTGGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112658663 383 + 115148730 GTTCTTGTCTCTTTCA-CTGAG-TTCtcctaccatcaggcaggttccatgctcatcaccaggcccctggctgcaacttttcataccctgtcaacatttggttcactgatgattgttgtttgctagattttccaagcagttcc-atataaacaatgttcccatatctttgaacattcaaaaatcagtttgtattgcttttatacttgattgaaataatag-ttggt-ataaaatctctgggttgcactttcttagtgca-aaatttcacgggtctcagctcttccagtattgaatactgctACAC-ACTGCCCTGTTGATTACAGATTGAAGCTGGCCATCAGACTTGCAAGA--CACAGACA-GCTTTAATCTGATACCGCATTTACTGGGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942250 367 + 190429646 GT-------TCTTTCA-CTGAG-TTCtcccaccatcaggcaggttccatgctcatcaccaggcctctggctgcaacttttcataccctatcaacatttggttcactgatgtttgttgtttgcgagatttttcaagcagttc---------caatgttcccatatttttaaacattcaaaaatcagtttgtgttgcttttagacttgattgaaagaatag-ttagt-ataacatctctgggttgcagtttcttGGTGCA-AAATTTCACAGGTCTCAGCTCTTCCAATATTGAATACTGCTACAC-ACTGACCTTGTGATTGCAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCTGATGCCACATTTACTGGACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187889791 375 + 189454096 GT-------TCTTTCA-CTGAG-TTCtcccaccatcaggcaggttccatgctcatcaccaggcccctggctgcaacttttcataccctatcaacatttggttcactgatgtttgttgtttgctaaatttttcaagcagttcc-atataaacaatgttcccatatctttaagcattcaaaaatcagtttgtgttgcttttatacttgattgaaagaatag-ttggt-ataaaatctctgggttgcagtttcttggtgca-aaatttcacaggtctcagctcttccaatactgaatactgctACAC-ACTGACCTTGTGATTGCAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CATAGACA-GCTTTAATCTGAGGCCACATTTACTGGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24267756 375 - 25927173 GT-------TCTTTCA-CTGAG-TTCTCCCACCATCAGGCAGGTTCCatgctcatcaccaggcccctggctgcaacttttcatactctatcaacatttggttcattgatgtttgttgtttgccagatttttcaagcagttcc-atataaacaatgttcccatatttttaaacattcaaaaatcagtttgtgttgcttttagacttgattgaaagaatag-ttagt-ataacatctctgggttgcagtttcttGGTGCA-AAATTTCACAGGTCTCAGCTCTTCCAATATTGAATACTGCTACAC-ACTGACCTTGTGATTGCAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCTGATGCCACATTTACTGGACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3307054 375 + 4669795 GT-------TCTTTCA-CTGAG-TTCtcccaccatcaggcaggttccatgctcatcaccaggcccctggctgcaacttttcataccctatcaacatttggttcactgatgtttgttgtttgctagatttttcaagcagttcc-atataaacaatgttcccatatttttaaacattcaaaaatcagtttgtgttcctttgagacttgattgaaagaatag-ttagt-ataacatctctgggttgtagtttcttggtgca-aaatttcacaggtctcagctcttccaatattgaatactgctACAC-ACTGACCTTGTGATTGCAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCTGATGCCACATTTACTGGACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134266165 374 + 135778131 GT-------TCTTTCA-CTGAG-TTCTCCCACCATCAGGCAGGTTCCATGCTCATCACCAGGCCCCTGGCTGCAGCTTTTCATACCCTATCAACATTTGGTTCACTGATGTTTGTTGTTTGCTAGATTTTTCGAGCAGTTCC-ATATAAACAATGTTCCCATATCTTTAAACATTCAAAAATCAGTTTGTGTTGCTTTTAGACTTGATTGAAAGAATAG--TAGT-ATAACATCTCTGGGTTGCAGTTTCTTGGTGCA-AAATTTCACAGGTCTCAGCTCTTCCAATACTGAATACTGCTACAC-ACTGACCTTGTGATTACAGATTCAAGTT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCGGAGGCCACATTTACTGGACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699498 374 - 2847728 GT-------TCTTTCA-CTGAG-TTCTCCCACCATCAGACAGGTTCCatgctcatcaccaggcccctggctgcaacttttcataccctatcaaca-tcggttcactgatgtttgttgtttgctagatttttcaagcagttcc-atataaacaatgttcccatatttttaaacattcaaaaatcagtttgtgttgcttttagacttgattgaaagaatag-ttggt-ataacgtctctgggttgcaatttcttGGTGCA-AAATTTCACAGGTCTCAGCTCTTCCAATATTGAATACTGCTACAC-ACTGACCTTGTGATTACAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCTGATGCCACATTTACTGGACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 825934 375 + 2368649 GT-------TCTTTCA-CTGAG-TTCtcccaccatcaggcaggttccatgctcatcaccaggccccttgctgcaactcttcataccctgtcaacatttgcttcactgatgtttgttgtttgctagatttttcaagcagttcc-atataaacaatgctcccatatctttaaacattcaaaaatcagtttgtgtggcttttatacttgaatgaaagaacag-ttggt-ataaaatctctgggttgcagtttcttggtgca-aaatttcacaggtctcagctcttccaatattgaatactgctACAC-ACTGACCTTGTGATGACAGATTCAAGCT-GCCATCAGCCTTGCAAGA--CACAGACA-ACTTTAATCTGATGCCACATTTACTGGACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189577778 358 - 190850796 GTTCTTGCCTCTCTCG-CTGAG-TCCTCTGAC----------------tgctcatcagccggc-cctggctgcggcttctcgtactccatcaacatgtggttcactgacgtttgacgcccggtagggttttcaagcagctcc-gtgtaaacagtgttccctaacccttaaacattcaaaactcagtttgtgctgcttctatacttgaatgaaagaagag-ttggt-ataaaatctctgggttgcactttcttggtgca-aaatttcatgggtctcaactcttccagtattgaacactgctgcac-ac--------tgaggacagATTCAAGCTGGCCCTCCGACTCGGAAAA--CATGGACA-GCTTTAATCTGATGGCACATTTACTGGGCT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 953289 359 - 2196201 GTTCTTGCCTCTTTCA-CTGAG-CTCTCCGCC------------TCCATGCTCCTCTCCAGGC-CCCGGCCGCAGCTTTTCCTGCTCTGTCAACATG-GGTTCACC-ATGCTTCTTGCTtggta-ggtttccaagcagttcc-gtgtaagcaatgttcccttatccttgaacattcaaaaaccagtttgtgttgctttcatacttgaatgaaagaagag-ttggt-ataaaatctctgggttgcactttcttggtgca-aaatttcatgggtctcagctcttccagtgtggaatgctgctgCAC-AC--------TGATGACGGATTCAAGCTGGCCATCCGACTCGGAAAA--CACAAACA-GCTTGAATCTGATGGGACCTTTACTGGGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349556 362 - 5030052 GTTCTTGTCTCTTTCA-CTGAG-TTCTCCGac------------tccgtgctcatcaccaggc-tccggctgcagcttttcatattctatcaacatttggtttaccgatgtttgttgctcggtagggttttcaagcagttcc-gtgtaaacaatgttcccttatccttgaacattcaaaaatcagtttgtgttgcttttatacttgaatgaaagaatag-ttggt-ataaaatctctgggttgtactttcttggtgca-aaatttcatgggtttcagctcttccagtgttgaacactgctgCAC-AC--------TGATGACAGATTCAAGCTGGCCATCCGACTCGGAAAA--CACAAACA-GCTTTAATCTGATGGCACATTTACTGGGCT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86526862 380 - 129401213 GTCCTCGTGTCTTACAGTTCAC-TTCTCCTACAATTTGGCATCCTGCA-GCTCTTTGA-GGGCCCAGGGCTGCATCTTTTCATACCATttcaacatttggtttactgttgtttgtccagtcgtggatgttttgaggggttcctatagaaacagtgttcccttatctttctaccccttccaatcagtttgctctgcccttctccttgaattaaagtgtgg-ctgccgagaaaatacctgcattacacttcctttctgca-gaattttatgggtgtCATTTCTCCTAGGGTTGAAGACTGCTGGGCTGCTGCCCTTGTGATTACAGATTCAAATTAACCA-CAGGTTCACATGACCCATAGAGG-CCTTT------ATGCACTGTACACTGGGCT i mm10.chr8 I 1129 I 1532 s canFam3.chr16 16888916 367 - 59632846 GGTCATATTTCCCACA-AACAA-CTTCTCACcctccagttaggttaaatgctcactgccaggcccttggctgcaaatttacatgtcatatcaacatatggttcactgatgtttgtcctatagtcaatttttaaagcagtttctgtggaaacaatattctcttatgtttaagcattcaaaa-----tcaatattgcctttatacttaaataaaactatgttttagc-aaaaaat------attccagtat-------aa-gaattttgtgggtctca-ttctcctggtgttgaatgttgctACAC-CCTGCTTCTGTGAAGACAGATCCAACTTGGCAGTCAGACTCAGGAGA--CAAAAATAGGTTTTAATGTGATACTGCATTTACCTGGCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397424 370 - 2520184 ggtcacatctcccaca-ctcagcttctcccagagttaagcagattcagtgttcactgccaggttcttggctgcaac--ctcctatcctaacagcatcaggctcaacaatgcttgtcctgtagcagggttttcaagaagctcc-cattaagtaatgctccctgatcttaga--atttcaaaatcagattgtgttgcttttatacttgaatacaagcatggtttggc-attaaattcttgggttttactttcttggtatgttaattttgtgggtctcgcttctccaagtgttgagtttggctgCCC-CACCATCATGTGATTACAGATCCAATCTGGCAATCAGACTCACAAGA--CAAAGTCG----TTAATGTAA------ATTTTTTGA--- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=4872331.000000 s hg38.chr4_KI270789v1_alt 61587 528 + 205944 TTAAAGGAGGATACAGGCCGGGAGACA---CAGCTGGTG--------------------------------TCCTGGGGCACCCA-CAGCTCCCTTTGCCCTTTCACCTATCCAGGGCCTATGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGCGGGCCACATGGATAATCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATGCTATTTCTAGACACAAAGCTAC-AAGCCACATATTGATTCACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCTATTTCAAATCTGTAATTTCCAAGtgtgtctgttagcttc-tgttg-attaggaaattatccccaaatttagtcacttcaaacagcaacagtttgttaacctaaggatctgctgaagagttcccatggtctgggctg---gctctggctaatctcgcccaggcttgctcaCATGACTGCAGTGCCTTAGCAGGATGGCAGAGGGC-GACTA-GCCCGTCATAGCCTGCCTGTGG-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G s panTro5.chr4 192852751 523 + 194502333 TTAAAGGAGGATACAGGCCGGGAGACA---CAGCTGGTG--------------------------------TCCTGGGGCACCCA-CAGCTCCCTTTGCCCTTTCACCTATCCAGGGCCTATGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGCGGGCCACATGGATAATCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATGCTATTTCTAGACACAAAGCTAC-AAGCCACATATTGATTCACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCCATTTCAAATCTGTAATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAAATTTAGTCACTTCAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCTATGGT-----CTG---GCTCCGGCTAATCTTGCCCAGGCTTGCTCACATGACTGCAGTGCCTTAGCAGGATGGCAGAGGGC-GACTA-GCCCGTCATAGTCTGCCTGTGG-TCTGGTGGTTGGCCATTTGCCTCTGGCTCC-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192736975 523 + 195804263 TTAAAGGAGGATACAGGCCGGGAGACA---CAGCTGGTG--------------------------------TCCTGGCGCACCCA-CAGCTCCCTTTGCCCTTTCACCTATCCAGGGCCTATGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGCGGGCCACATGGATAATCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATGCTATTTCTAGACACAAAGCTAC-AAGCCACATATTGATTCACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCCATTTCAAATCTGTAATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAAATTTAGTCACTTCAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCTATGGT-----CTG---GCTCCGGCTAATCTTGCCCAGGCTTGCTCACATGACTGCAGTGCCTTAGCAGGATGGCAGAGGGC-GACTA-GCCCGTCATAGTCTGCCTGTGG-TCTGGTGGTTGGCCATTTGCCTCTGGCTCC-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3773533 527 + 4876863 TTAAAGGAGGATACAGGCCGGGAGACA---CAGCTGGTG--------------------------------TCCTGG-GCACCCA-CAGCTCCCTTTGCCCTTTCACCTATCCAGGGCCTATGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGCGGGCCACATGGATAATCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATGCTATTTCTAGACACAAAGCTAC-AAGCCACATATTGATTCACAGCCCCTCTGTTCCAAGGGCAATGGAACACAGGTGATGAGGG-AGACA-----TTCCACATCTATTTCAAATCTGTAATTTCCAAGtgtgtctgttagcttc-tgttg-attaggaaattatccccaaatttagtcacttcaaacagcaacagtttgttAACCTAAGGATCTGCTGAAGAGTTCCCATGGTCTGGGCTG---GCTCCGGCTAATCTCGCCCAGGCTTGCTCACATGACTGCAGTGCCTTAGCAGGATGGCAGAGGGC-GACTA-GCCCGTCATAGCCTGCCTGTGG-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112659046 527 + 115148730 TTAAAGGAGGACACAGGCCGGGAGACA---CAGCTGTTG--------------------------------TCCTGGGGCACCCA-CAGCTCCCTTTGCCCTTTCACCTCTCCAGGGCCTATGTGGCTGCTGCAAACAAGAGTCAGGGTGCTTGCGGGCCACCTGGATAATCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACAAAGCTAC-AAGCCACATATTGATTCACAGCCCCCCTATTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCGACATCTATTTCAAATCTGTAATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAAATTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCCATGGTCTGGGCTG---GCTCTGGCTAATCTCACCCAGGCTTGCTCACGTGTCTGCAGTGCCTTAGCA-GATGGCAGAGGGT-GACTA-GCCCCTCATAGCCTGCCTGTGG-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188942617 526 + 190429646 TTAAAGGAGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAACCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACCAAGCTAC-AAGCCACATATTAATTAACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCTATTTCAAATCTGTCATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAC-TTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCCATGGTCTAGACTG---GTTCCCGCTAATCTCGCCCAGGCTTGCTCACGTGTCTGCAGTGCCATAGCA-GATGGCGGAGGGC-GACTA-GGCCCTCGTAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187890166 526 + 189454096 TTAAAGGAGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAACCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACCAAGCTAC-AAGCCACATTTTAATTAACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCTATTTCAAATCTGTCATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAC-TTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCCGTGGTCTAGACTG---GTTCCCGCTAATCTCGCCCAGGCTTGCTCACGTGTCTGCAGTGCCATAGCA-GATGGCAGAGGGC-GACTA-GCCCCTCGTAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24268131 526 - 25927173 TTAAAGGAGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAACCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACCAAGCTAC-AAGCCACATATTAATTAACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGAGGG-AGACA-----TTCCACATCTATTTCAAATCTGTCATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAC-TTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCCGTGGTCTAGACTG---GTTCCCGCTAATCTCGCCCAGGCTTGCTCACGTGTCTGCAGTGCCGTAGCA-GATGGCGGAGGGC-GACTA-GCCCCTCGTAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3307429 527 + 4669795 TTAAAGGAGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAACCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACAAAGCTAC-AAGCCACATATTAATTAACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGGGGG-AGACA-----TTCCACATCTATTTCACATCTGTCATTTCCAAGTGTGTCTGTTAGCTTC-TGTTG-ATTAGGAAATTATCCCCAC-TTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTCCCGTGGTCTAGACTG---GTTCCCGCTAATCTCGCCCAGGCTTGCTCACGTGTCTGCAGTGCTGTAGCAGGATGGCAGAGGGC-GACTA-GCCCCTCATAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134266539 525 + 135778131 TTAAAGGAGGACCCAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTATGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAGCCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACCAAGCTAC-AAGCCACATATTAATTAACGG--CCCCTGTTCCAAGGGCAATGGAACATAGGTGATGCGGG-AGACA-----TCCCACATCTATTTCAAATCTGTCATTTCCAAGTGTGTCTGTTAGCGTC-TGTCGAATTAGGAAATTATCCCCAC-TTTAGTCACTTAAAACAGCAACAGTTTGTTAACCTAAGGATCTGCTGAAGAGTTGCCATGGTCTAGACTG---GTTCCCGCTAATCTCGCCCGGGCTTGCTCACGTGTCTGCAGTGCCTTAGCA-GATGGCAGAGGGC-GACTA-GCCCCTCATAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2699872 526 - 2847728 TTAAAGGTGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------CCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAACCACAGCCTTGATTTCCCAACAATTTTTTATACTGTTTCTAGACACAAAGCTAC-AAGCCACATATTAATTAACAGCCCCCCTGTTCCAAGGGCAATGGAACATAGGTGATGGGGG-AGACA-----TTCCACATCTATTTCAAATCTGTCATTTCCAAGAgtgtctgttagcttc-tgttg-attaggaaattatccccac-tttagtcacttaaaacagcaacagtttgttaacctaaggatctgctgaagagttcccatggtctagactg---gttcctgctaatctcgcccaggcttgctcacgtgtctgcagtGCCGTAGCA-GATGGCAGAGGGC-GACTA-GCCCCTCGTAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTGGCCTCTGGCTCA-G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 826309 526 + 2368649 TTAAAGGAGGACACAGGCCAGGAGACA---CAGCTGGTG--------------------------------TCCTGGGGCACCCA-CAGCTCCCTTTGCCCTCTCACCTGTCCAGGGCCTATGTGGCTGCCACAAACAAGAATCAGGGTGCTTGTGGGCCACCTGGATAATCAGAAGCCACAGCCTTGATTTCCCAACACGTTTTTATACTGTTTCTAGACACAAAGCTAC-AAGCCGCATATTCATTAACAG--CCCCTGTTCCAAGGGCAATGGTACACAGGTGATGAGGG-AATCG-----TTCCACGTGTATTTCAAATCTGTAATTTCCAAGTGTGTCTGTTAGCTTC-TGTCG-ATTAGGAAATTATCCCCACATTTAGTCACTTAAAACAGCAACGGTTTGTTCACCTGAGGATCTGCTGAAGGGTTCCCGTGGTCTAGACTG---GTTCCCGCTCCTCTCACCCAGGCTTGCTCTCGTGTCTGCGGTGCCGTGGCAGGATGGCAGAGGGC-GACTG-GCCCCTCCTAGCCTGCCTGTGA-TCTGGTGGTTGGCCATTTGCCTCTGGCTCA-G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189578136 522 - 190850796 TTAGAGCCGGGCACAGGCCTGGAGGCA---CAGCTGGTG--------------------------------CTCTGGGCTGCCCA-CAGCTCCCTTTCTCCTCTCAGCTCTCCAGGGCCTGGGTGGCTGCCACAATCAAGAGTTGGGGTGCTTGTGGGACACCTGAAGACTCAGAAGCCACTGCCTTGATTTCCCAACAATTTTTTATACTGTT--TAGGCACAAAGCTAC-AAGCCACATATTAATTCACAGCCCCCCTGTTCCAAGGGCAATGGAACACAGGTGATGAGGG-ACACA-----TTCCACATCTAGCTCCAATCTGTAGTTTCCAAAtgtgtctgatagcttc-tgctg-attaagaaattgtccccaaatttagtcacttaaaacagcaatggtttattaacctaaggatctgctgaagagttcccatagtctgggctg---cctccagctcctctctcccaggcttgctcacgtgtctgtggt-cCTTAGCAGGATGGCAGAGGAC-AACTG-GCCCCTCATAG-CTACCTGTGG-TCTGGCGGTTGGCCATTTGCCTCTGATTC--- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 953648 522 - 2196201 TTAGAGGAGGGCACAGGCCTGCAGGCA---CGGCTGGCG--------------------------------CCCCTGGGTACCCA-CGGCTCCCTTTCTCCTCTCAGCTATCCAGGGCTTGTGTGGCTGCCACAAACAAGAGTCGGGGTGCTTGTGGGCTACCTGAAGACTCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATACTGTT--TAGACACAAAGCTAC-AAGCCACATATTAATTCCCAGCCCCCCTGTTCCAAGGGCAATGGAACACAGGTGATGAGGG-AGACA-----TTCCACATCTAGCTCCAATCTGTAGTGTCCAAGCCTGcctgttaccttc-tgttg-attaagaaattatccccaagtttagtcacttaaaacagcaacagtttattaacctaaggatctgcTGAAGAGTTCCCATAGTCTGGGCTG---GCTCCAGCTCATCTCGCCCAGGCGTGCTCACGTGTCCGCGGT-CCTTAGCAGGATGGCAGAGGAC-GACTG-GCCCCTCATAG-CTACCTGTGG-TCTGGCGGTTGGCCATTTGCCTCTGACTC--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3349918 522 - 5030052 TTAGAGGAGGGCACAGGCCTGGAGGCA---TGGCTGGTG--------------------------------CCCTGGGGTACCCA-CAGCTCCCTTTCTCCTCTCAGCTATCCAGGGCCTGTGTGGCTGCCACAAACAAGAGTCGGGGTGCTTGTGGGCCACCTGAAGACTCAGAAGCCACCGCCTTGATTTCCCAACAATTTTTTATACTGTT--TAGACACAAAGCTAC-AAGCCACATATTAATTCACAGCCCCCCTGTTCCAAGGGCAGTGGAACACAGGTGATGAGTG-AGACA-----TTCCACATCTAGCTCCAATCTGTAGTTTGCAAGCGTGTCTgttagcttc-tgttg-attaagaaattatccccaaatttagtcacttaaaacagcaacagtttattaacctaaggatctgccgaagagttcccatagtctgggctg---gctctggctcctctctcccaggcgtgctcacgtgtctgctgT-CCTTAGTAGGATGGCAGAGGAC-AACCG-GCCCCTCATAG-CTCCCTGTGG-TCTGGCGGTTGGCCATTTGCCTCTGACTT--- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16889283 543 - 59632846 -TTATAGAGGATACAGGACAGGGGACA---CAGCTGGTA---CAGAAACTTTA-----------TC----TCATTGGCAAATGCAGCAGTGCCTTTGGCCTTCTCCTCTATATGGAGGAATTACGGTTGGCACAAACAAATGTCAAAGTTCTTAGGGG-CATCTTGATACTGAGGATCCACTG-ATGGATTTCTCATCAATGTTTTAAATTGTT-CTAGACAGAAAAGCAT-AAGCTGCATGTCAATTAACAGATCCCTTATTCCTGGGGCAAAGGAACACAGGAGATGAGGGAAGACA-----TTCCATGTTTATTTCAAATATATAATTTCCAAGTGTGCCTGGTAGCTTCTTGGTC-TTtaagaaatgatcccaaaacttagtagcttaaaataaaaacagcaggttgactcatggttctgctgaatagtt-caatggtctgggctgggtggtctaactaatcttgaccaggcttgctcatgggcctgtgatcaactggcactttggtggagcactggttg-gttccagatagcctgcgcacggttctggtggttggc---tccccctgggctcagg i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1397794 524 - 2520184 -------AGGATACAGAACAG-AGACAGTTCAAGTGGTCAGTCAGCCACTCTAAGCACAAGGAGTCTTAGTTCCTAGAGCA--CA-AAGCTTCTTTTGCCCTCTCACCTATTCCAGACATATATGGCTG---------------------CTTGTGGGCCACCTGGACACTGAGAAGTCACTACCTTGCTTTCCCATCAATCTTTTTTA-------TAGACACAAAGGACCAAAACTGCCTGTCAATTCCCAGTTCTCCCAGTCCAAGGGCCGCCCCACATAGGAGATGAGAA-AGACACAGTGTTTCACAACGATTTTAACTCTATAATTTCCAGGtgtgtctcttagcttt-ttctg-tataagaaacaatcccaaagtcca--tgcttaaaataacgacagttttatgagcttggattctgct-aataggtctgaatgtctgggcgg---acactggccgagcttgccttggcttgctcacgtgtctgtgatcagctgGCA-GGCTGCTGAGGGC-AGGTGCATCCTAGATAGCCCCCACA-GG-TCTGGTGGCCGGCTCCCTGTC---AGCTCA-G i dasNov3.JH570353 C 0 I 2721 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86527242 1532 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=45726.000000 s hg38.chr4_KI270789v1_alt 62115 9 + 205944 CGTGGCGAT s panTro5.chr4 192853274 9 + 194502333 CGTGGTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192737498 9 + 195804263 CGTGGTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774060 9 + 4876863 CGTGGCGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112659573 7 + 115148730 TGT-GCGA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943143 9 + 190429646 CGTGGTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187890692 9 + 189454096 CGTGGTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24268657 9 - 25927173 CGTGGTGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3307956 9 + 4669795 CGTGGTGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267064 9 + 135778131 CGTGGTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2700398 9 - 2847728 CGTGGTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 826835 9 + 2368649 CGTGGCGAt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16889826 9 - 59632846 catgatgat i canFam3.chr16 C 0 I 1633 e calJac3.chr3 189578658 0 - 190850796 C e cebCap1.NW_016107886v1 954170 0 - 2196201 C e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1398318 2721 - 2520184 I e mm10.chr8 86527242 1532 - 129401213 I e aotNan1.NW_018492112v1 3350440 0 - 5030052 C e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=2755813.000000 s hg38.chr4_KI270789v1_alt 62124 396 + 205944 TGTTTCATTATTTTGCATTC--------TTttgttgttgttgttttttgttgtttttttttgtttg-------------------------ttttttgtttttcgtgttttttttgagacagg----gtctctctctgtcacccagactggagtgcagtgacgtgatctcagcttacagcaacctctgcctctgaggctcaagcaactctcccgcctctgcctcccaggtagctgggattacaggcgagcgccaccaccgcccagctaatttttgtatttttagtagagatgggttttcaccatgttggcccgggtggtctcgaactcctgacctcaaatgatccagccgcctcgccctcccaaagtgctgggattacaggcgtgagccactgcgcctgCC----TGTTGTTAATAGTGGTAAAATA-TTTGGTGCAG s panTro5.chr4 192853283 393 + 194502333 TGTTTCATTATTTTGCATTC--------ttttgttgttgttgttgttttttgttttttt---tttg-------------------------ttttttgttttttgtgttttttttgagacagg----gtctcactctgtcacccagactggagtgcagtgacgtgatctcagcttacagcaacctctgcctctgaggctcaagcaactctcctgcctctgcctcccaggtagctgggattacaggtgagcgccaccaccgcccagctaatttttgtatttttagtagagatgggttttcaccatgttggcccgggtagtctcgaactcctgacctcaaatgatccagccgcctcgccctcccaaagtgctgggattacaggcgtgagccactgcgcctgCC----TGTTGTTAATAGTGGTAAAATA-TTTGGTGCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192737507 390 + 195804263 TGTTTCATTATTTTGCATTC--------ttttgttgttgttgttgttttttgttttt-----tttg--------------------------tttttgttttttgtgttttttttgagacagg----gtctcactctgtcacccagactggagtgcagtgacgtgatctcagcttacagcaacctctgcctctgaggctcaagcaactctcctgcctctgcctcccaggtagctgggattacaggtgagcgccaccaccgcccagctaatttttgtatttttagtagagatgggttttcaccatgttggcccgggtagtctcgaactcctgacctcaaatgatccagccgcctcgccctcccaaagtgctgggattacaggcgtgagccactgcgcctgCC----TGTTGTTAATAGTGGTAAAATA-TTTGGTGCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774069 394 + 4876863 TGTTTCATTATTTTGCATTC--------TTttgttgttgttgttttttgttgttttttt---tttg------------------------tttttttgttttttgtgttttttttgagacagg----gtctcactctgtcacccagactggagtgcagtgacgtgatctcagcttacagcaacctctgcctctgaggctcaagcaactctcccgcctctgcctcccaggcagctgggattacaggcgagcgccaccaccgcccagctaatttttgtatttttagtagagatgggttttcaccatgttggcccgagtggtctcgaactcctgacctcaaatgatccagccacctcgccctcccaaagtgctgggattacaggcgtgagccactgcgcctgCC----TGTTGTTAATAGTGGTAAAATA-TTTGGTGCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112659580 365 + 115148730 TATTTCA-TATTTCA---TC--------Ttttgttgttgttgttttt---------------tttt-----------------------------------------ttttttttgagacagg----gtctcactctgtcacccagactggagtgcagtgacgtgatctcagcttacagcaacctctgcctctcaggctcaagcaactctcccgcctctgcctcccaggtagctgggattacaggtgagcgccaccaccgcccagctaatttttgtatttttagtagagatgggttttcaccatgttgacccgggtggtctcgaacccctgacctcaaatgatccagccacctcgccctcccaaagtgctgggattacaggcgtgagccactgcgcctggccTGTTGTTGTTAATAGTGATAAAATA-TTTGGTGCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943152 406 + 190429646 TGTTTCATTATTTTGCATTC--------TTCtgttgttgttttttgttgtgggttta-----ttttattttattttattttat--------------tattattttttttttttGgagacagg----gtttcactctgtcacccagactggagtgcagtgacatggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcctgcctctgcctcccaagtagctgggagtacaggcaagtgccaccaccgcccagctaatttttgtatttttagtctagatggggtttcaccatgttggcccgggtggtctcgaacctctggcctcaaatgatccagccgcctcaccttcccaaagtgctgggattacaggcgtgagccaccacgcctggcctgttgttgttAATAATGATAAAATA-TTTGGTTCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187890701 389 + 189454096 TGTTTCATTATTTTGCATTC--------TTCtgttgttgttttttgttgtgggtttg-----tttt-------------------------------ttttttctttttttttttgagacagg----gtttcactctgtcacccagactggagtgcagtgatgcggtctcagcttacagcaacctctgtctgtcaggctcaagtaattctcctgcctctgcctcccaagtagctgggattacaggcaagtgccaccaccgcccagctaatttttgtatttttagtctagatggggtttcaccatgttggcccgggtagtctcgaacctctggcctcaaatgatctagccgcctcaccttcccaaagtgctgggattacaggcgtgagccaccacgcctggcctgttgttgttAATAATGATAAAATA-TTTGGTTCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24268666 421 - 25927173 TGTTTCATTATTTTGCATTC--------TTCtgttgttgttttttgttgtgggttta-----ttttattttattttattttattttattttattttattttattttatttttttggagacagg----gtttcactctgtcacccagactggagtgcagtgacatggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcccgcctctgcctcccaagtagctgggagtacaggcaagtgccaccaccacccagctaatttttgtatttttagtagaggtggggtttcaccatgttggcccgggtggtctcgaactcctggcttcaaatgatctagccgcctcaccttcccaaagtgctgggattacaggcgtgagccaccgcgcctggcctgttgttgttAATAATGATAAAATATTTTGGTTCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3307965 380 + 4669795 TGTTTCATTATTGTGCATTC--------TTttgttgttgttgtttgttgtggggttt-----tttt----------------------------------------ttttttttggagatagg----gtttcactctgtcacccagactggagtgcagtgacatggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcccgcctctgcctcccaagtagctgggattacaggcaagtgccaccaccgcccagctaatttttgtatttttagtagaggtggggtttcaccatgttggcccgggtggtctcgaactcctggcctcaaatgatctagccgcctcaccttcccaaagtgctgggattacaggcgtgagccaccgcgcctggcctgttgttgttAATAATGATAAAATA-TTTGGTTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267073 385 + 135778131 TGTTTCAGTATTTTGCATTA--------TTttgttgttgttttttgttgtgggtttt-----tttt-----------------------------------ttttttttttttttgagacagg----gtttcactctgtcacccagactggagtgcagtaccacggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcccgcctctgcctcccaagtagctgggattacaggcaagtgccaccaccacccagctaatttttgtatttttagtagagatggggtttcaccatgttgccccgggtggtcttgaactcctggcctcaaatgatccagccgcctcaccttcccaaagtgctgggattacaggcgtgagccaccgcgcctggcctgttgtcgttAATAATGATAAAATA-TTTGGTTCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2700407 382 - 2847728 TGTTTCATTATTTTGCATTC--------TTttgttgttgttttttgttgtggg---t-----tttt-----------------------------------tttttttttttttggagatagg----gtttcactctgtcacccagactggagtgcagtgacatggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcccgcctctgcctcccaagtagctgggattacaggcaagtgccaccaccgcccagctaatttttgtatttttagtagaggtggggtttcactgtgttgccccgggtggtctcgaactcctggcctcaaatgatctagccgcctcaccttcccaaagtgctgggattacaggtgtgagccaccgcgcctggcctgttgctgttAATAATGATAAAATA-TTTGGTTCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 826844 370 + 2368649 tgtttcgttattttgcattc--------ttttgttgttg---tttgttgtgggtttt-----tttt-----------------------------------------ttttttttgagacagg----gtttcactctgtcacccagactggagtgcagtgacgcggtctcagcttacagcaacctctgtctctcaggctcaagtaattctcccgcctctgcctcccaagtagctgggattacaggaaagtgccaccaccgcccagctaatttttgtacttttagtagagatggggtttcaccatgttggcccgggtggtctcgaactcctggcctcaaatgatccagccgcctcaccttcccaaagtgctgcgattacaggcgtgagccaccgcatctggcctgttgttgt------tgATCAGATA-TTTGGTTCAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189578658 355 - 190850796 --GTTCATTATGTTGGAttc--------ttttgttgttgttg--------------------tttg--------------------------------------------------aaacagggtctgtctaactctgtcacccagactagagtgcaatgacgc-gtctcagctcaccgcaacctctgcttcctgggcccaagcgattctccaccctcagcctcccaagtagctgagattacgggcatgcaccaccacagcctggctaagttttgtatttttggtagagatggggtttcaccacgtcggccaggctgatctccaacttctggtctcaaatgatccagccacgtcgccctcccaaagtacggcgattacaggtgtgagccaccgcacctggcGTGTTGTTGTTAATAGTGATACAATA-TTTGGTT-AG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 954170 332 - 2196201 --TTTCATTATGTTGTATTC--------TTTAGTTGTTGTTG--------------------TTCG--------------------------------------------------AAACAGGGTCTgtcttactctgtcacccagactagagtgcaataatgc-atctcagcttaccgcaacctccgcttcccgggttcaagcaattctccaccctcggcctcccaggtagctgggattacaggcatgcaccaccaccgcctggct-atttttgta-ttttagtagagacggggtttcaccatgttggccaggctgatctccaa--------ctcaaatgatccagccacgtcacactcccaaggtgctgggattacaggtgcgagccacc-------------TGTTGTTAATAGTGATACAGTA-TTTGGTT-AG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3350440 362 - 5030052 --TTTCATTATGTTGTAttcttttgttattttgttattgttg--------------------tttg--------------------------------------------------aaacaggatctgtcttactctgtcacccagactagagtgcaatgacgc-atctcagcttaccgcaacctctgcttcccaggctcaagcgattctccaccctcagcctcccaagtagctgggatcacgggaatgcaccaccaccgcctggctaatttttgta-ttttagtagagatggggtttcaccatgttggccaggctgatctccaccttctggcctcaaatgatccagccacgtcgccctcccaaagtgctgggattacaggtgtgagccagcacacctggccTGTTGTTGTTAATAGTGATACAATA-TTTGGTT-AG i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1398318 2721 - 2520184 I e canFam3.chr16 16889835 1633 - 59632846 I e mm10.chr8 86527242 1532 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=606047.000000 s hg38.chr4_KI270789v1_alt 62520 86 + 205944 CTTCTCAGTGGCCACATTTTACAGTTTCGGATGCACTTTCTGGATCGGGCATGCATTTTCTGCTTGTGTAACTCTGCTTATTTTGC s panTro5.chr4 192853676 86 + 194502333 CTTCTCAGTGGCCACATTTTACAGTTTCGGATGCACTTTCTGGATCGGACATGCATTTTCTGCTGGTGTAACTCTGCTTATTTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192737897 86 + 195804263 CTTCTCAGTGGCCACATTTTACAGTTTCGGATGCACTTTCTGGATCGGACATGCATTTTCTGCTGGTGTAACTCTGCTTATTTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774463 86 + 4876863 CTTCTCAGTGGACACATTTTACAGTTTCGGATGCACTTTCTGGATCGGACATGCATTTTCTGCTGGTGTAACTCTGCTTATTTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112659945 86 + 115148730 CTTCTCAGTCACCACATTTTACAGTTTCAGATGCACTTTCTGGACCGGACATGCATTTTCTGCTGGTGTAACTCTGCTTATTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943558 71 + 190429646 CTTCTCAATGGCCATATTTTACAGTTTCGGATGCACTTTCTGGACTGGA-------------CTGGTGTAA--CTGCTTATTTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891090 73 + 189454096 CTTCTCAATGGCCACATTTTACAGTTTCGGATGCACTTTCTGGACTGGA-------------CTGGTGTAACTCTGCTTATTTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269087 73 - 25927173 CTTCTCAATGGCCACATTTTACAGTTTCGGATGCACTTTCTGGACTGGA-------------CTGGTGTAACTCTGCTTATTTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308345 73 + 4669795 CTTCTCAATGGCCGCATTTTACAGTTTCGGATGCACTTTCTGGACTGGA-------------CTGGTGTAACTCTGCTTATTTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267458 73 + 135778131 CTTCTCAATGGCCACATTTTACAGTTTCAGATGCACTTTCTGGACTGGA-------------CTGGTGTAACTCTGCTTATTTTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2700789 73 - 2847728 CTTCTCAATGGCCACATTTTACAGTTTCGGATGCACTTTCTGGACTGGA-------------CTGGTGTAACTCTGCTTATTTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827214 74 + 2368649 CTTCTCAATGGCCACATTTTACAGTTTCGGCTGCACTTTCTGAACTGGAC------------CTGGTGTAACTCTGCTCATTTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579013 86 - 190850796 CTTCTCAATGGCCGCATCTTACAGTTTCTGATGCACTTTCTTGATGGGACGTCCCTTTTCGGCTGGTGTAACTCTGCTTATTTTCC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 954502 86 - 2196201 CTTCTCAATGGCCGCGTTTTACAGTTCCTGATGCACTTTCTTCACGGGACATCCCTTTTCGGCTGGTGTAACTCTGCTTATTTTCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3350802 86 - 5030052 CTTCTCAATGGCCGCGTTTTACAGTTTCTGATGCACTTTCTTCATGGGACGTCCCTTTTCAGCTGCTGAAACTCTGCTTAGTTTCC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86528774 69 - 129401213 CCTCCCAAGGGTCACATATT---TTCTTGCATGTTCTATTTG-------------CTTTTTGCTGCTGT-ACTGTGTTTCTTTTAT i mm10.chr8 I 1532 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1398318 2721 - 2520184 I e canFam3.chr16 16889835 1633 - 59632846 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=77893.000000 s hg38.chr4_KI270789v1_alt 62606 12 + 205944 ATTATTT-TAAGG s panTro5.chr4 192853762 12 + 194502333 ATTATTT-TAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192737983 12 + 195804263 ATTATTT-TAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774549 12 + 4876863 ATTATTT-TAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660031 12 + 115148730 ATTATTT-TAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943629 12 + 190429646 ATTGTTT-GAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891163 12 + 189454096 ATTGTTT-GAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269160 12 - 25927173 ATTGTTT-GAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308418 12 + 4669795 ATTGTTT-GAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267531 12 + 135778131 ATTGTTT-GAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2700862 12 - 2847728 ATTGTTT-GAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827288 12 + 2368649 ATTGTTT-GAAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579099 12 - 190850796 ATTACTT-TAAGG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 954588 13 - 2196201 GTTACTTGTAAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3350888 13 - 5030052 ATTACTTGTAAGG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86528843 11 - 129401213 GTT-TGG-CAAGT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1401039 12 - 2520184 ATTATTC-TTAAT i dasNov3.JH570353 I 2721 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16889835 1633 - 59632846 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1959263.000000 s hg38.chr4_KI270789v1_alt 62618 249 + 205944 CATTTATAATTAATTCTGATTCCTCATTTTGGACTATGTTTTGT----------------------TTCTCCTGAACCGTCTCTTTC---C-TGTAGGTAGAGGGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGGTAGAGCCTCACAGTCATATTTGGTATCCAG----CGGCCATTGCTCTGCCCCAGCCT---------------------------------GTCATCTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGACCGGGGG s panTro5.chr4 192853774 249 + 194502333 CATTTATAATTAATTCTGATTCCTCATTTTGGGCTATGTTTTGT----------------------TTCTCCTGAACCATCTCTTTC---C-TGTAGGTAGAGGGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGGTAGAGCCTCACAGTCATATTTGGTATCCAG----CGGCCATTGCTCTGCCCCAGCCT---------------------------------GCCATCTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACACTACC---TCTGTTTCTAGACTGTGACCCAGGACCGGGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192737995 249 + 195804263 CATTTATAATTAATTCTGATTCCTCATTTTGGGCTATGTTTTGT----------------------TTCTCCTGAACCATCTCTTTC---C-TGTAGGTAGAGGGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGGTAGAGCCTCACAGTCATATTTGGTATCCAG----CGGCCATTGCTCTGCCCCAGCCT---------------------------------GCCATCTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACACTACC---TCTGTTTCTAGACTGTGACCCAGGACCGGGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774561 249 + 4876863 CACTTATAATTAATTCTGATTCCTCATTTTGGACTATGTTTTGT----------------------TTCTCCTGAACCGTCTCTTTC---C-TGTAGGTAGAGGGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGGAAGAGCCTCACAGTCATATTTGGTATCCAG----TGGCCATTGCTCTGCCCCAGCCT---------------------------------GCCATCTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTTTAGACTGTGACCCAGGACCGGGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660043 252 + 115148730 CATTTATAATTAATTCTGATTCCTCATTTCAGACTATGTTTTCT----------------------TTCTCCTGAGACATCTGTTTCCTAC-TGTAGGTAGAGAGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGGTAGAGCCTCATAGTCATATTTGGTGTCCAG----TGGCCATTGCTCTGCCCCAGCCT---------------------------------GCCATCTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTAcc---tctgtttctagactgtgacccaggaccggggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943641 249 + 190429646 CATTTATAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCATCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCATAGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTCGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGATCAGGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891175 249 + 189454096 CATTTATAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCGTCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCACGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTCGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGATCAGGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269172 249 - 25927173 CATTTATAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCATCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCAGAGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTTGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGATCAGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308430 249 + 4669795 CATTTCTAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCATCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCACAGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTCGGTCTGCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGATCAGGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267543 249 + 135778131 CATTTATAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCGTCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTTGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTACCTCTACC---TCTGTTTCTAGACTGTGACCCAGGATCAGGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2700874 249 - 2847728 CATTTCTAATTAATTCTGATTCCTCATTTCAGACTATGTTTTGT----------------------TTTTCCTGAACCATCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCACGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTCGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTGTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTACC---TCTGTTTCTAGACTGTGACCCGGGATCAGGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827300 247 + 2368649 CATTTATAATTAATTCTGATTCCTCATTTCAGACTGTGTTTTGT----------------------TTTTCCTGAACCGTCTCTTTC---CTTGTAGGTAGAG-GCAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------TCCCTGGCTAGGACAAGATAGAGCCACAGAGTCATATTTGGTCTCCAG----CAGCCATTATTCTGCCCCAGCCT---------------------------------GCCGTTTGGCTCTGGTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTCTGCC---TC--TTTCTAGACTGTGACCCGGGATCAGGGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579111 234 - 190850796 TGTTTATAATTAATTTTGATTCTTCTTTT----CTATGTTTT---------------------------------ACCATCTCTTTC---T-TGTACATAGAGGGAAGCA-------------------------------------------------------------------------TTTCATGGAG-----------------------------------GG-CCAG-G--------GCCTTGGCTAGGACAACGGAGAGCCGCAGAATCGAGTCTGGTCTCCAG----CAGCCATTGTGCCGCCCCAGCCT---------------------------------GCCACCTGGCTGTGTTGGGTTTGGTG------------------------------------------------------------------------GCCCA----TGTCTAACTTCACC---TCTGTTTCTAGACTGTGACCCAGGACCCGGGG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 954601 237 - 2196201 CATTTATAATTAATTTTGATTCTTCTTTC-TGACTGTGTTTT---------------------------------ACCATCTCTTTC---C-TGTACATAGAGGGAAGCA-------------------------------------------------------------------------TTTCACAGAG-----------------------------------GG-CCAG-G--------TCCTTGGCTAGGACAAGGGAAAGCCACAGAATCAAGTCTGGTCTCCAG----TGGCCATCGTGACGCCCCAGCCT---------------------------------GCCGCCTGGCTGTGTGGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTTCACC---TCTGTTTCTAGACTGTGACCCAGGAcccgtgc i cebCap1.NW_016107886v1 C 0 I 7 s aotNan1.NW_018492112v1 3350901 238 - 5030052 CATTTATAATAAATTTTGATTCTTCTTTTCTGACTATGTTTT---------------------------------ACCATCTCTTTC---C-TGTACATAGAGGGAAGCA-------------------------------------------------------------------------TTTCAAGGAG-----------------------------------GG-CCAG-G--------TCCTTGGCTAGGGCAACGGAGAGCTGCAGAATCAAGTGTGGTCTCCAG----TGGCCATCGTGCCGCCCCAGCCT---------------------------------GCCACCTGGCTGTGTTGGGTTTGGTG------------------------------------------------------------------------GCCCA----CGTCTAACTTCACC---CCTGTTTCTAAACCATGACCCAGGACCCGGGG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86528854 345 - 129401213 TGCTTATAATTGATTCTAAG---CCATTTAAAAGTATGGTTTTTtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCCAGCTCTTTG---C-TGTAAATAGAGGAATTCA-------------------------------------------------------------------------CTTCTCTGAG-----------------------------------GGATCAG-ATGAGGGATTCCTTTG---------GGAAGTCCTGCAGAGCTATGTC------CCAGTAGACAGCCACTCCTTTGTCCCAGCCTCTGAAGCCTGATGGTGTTGTGAATGTTCGCAAGGCCAGTTGGTTTCTTTGCGTCTCCTG----------------------CTGCTTCTGGAATTACAAGCTTCCTCCAAATTTCCTGCATGTAT--GTAATTCCA----CGGTTAACCT--CC---TCTGCTTCTAGATTTTAACCCCAGGCCAAGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16891468 428 - 59632846 CATTTATGCTTAGttctgattactcatcttggaatatgtttcat----------------------ttttcctggatcagctcttca---t-catgggtggaagaaggcaTTAAGGGAGATGAGAGCCATGAtttatttttagttttattttttaaaatttattttaaatgttctatttatttttTTATTGAGATATAATTGACATATAACACTGTAAGTTGAAGGTAGG-TTGG-A--------GGCATGATTAGGATATGCAAGACCAGCAGAGCCGTGTCTGATTTGAGG----CAGCTGTTCCTTTCCTGAGCTCT---------------------------------GAAGCCTggctgctgtgtggtcacaaggccaatctctctgtcctccttctccctcagggagactctgcttcctccaaatattgcatatgtatacatgattcca----tgtttaaccctatc---tc-gcttctagaatttcacccagggccaagga i canFam3.chr16 I 1633 C 0 s dasNov3.JH570353 1401051 219 - 2520184 AATTTACACTGAATCCTGAGTACACATTTCTAAACACGCTTCGC----------------------TTGTCCTGGACCAGCTCATCG---A-TGTAGGTGGAGGAAGGTG-------------------------------------------------------------------------TT-------G-----------------------------------GA-CCAGCG--------TCTCCTGCCTGA-------------------------CGGCCTTTCTG----TGGCC-----CCTGCCCGGGCCT---------------------------------GTGGCTTCCCCACTGCTTCCTCCAGA------------------------------------------------------------------------TCCCATGGGTGTGTGACTGCAGCTGATCTGTGTCCAGA-GACCATCCAGGACAAAGGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=72753.000000 s hg38.chr4_KI270789v1_alt 62867 9 + 205944 AAATTAGTA s panTro5.chr4 192854023 9 + 194502333 AAATTAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738244 9 + 195804263 AAATTAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774810 9 + 4876863 AAATTAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660295 9 + 115148730 aaattagta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943890 9 + 190429646 AAATTAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891424 9 + 189454096 AAATTAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269421 9 - 25927173 AAATTAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308679 9 + 4669795 AAATTAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267792 9 + 135778131 AAATTAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2701123 9 - 2847728 AAATTAGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827547 9 + 2368649 ACATTAGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579345 8 - 190850796 AGAGTAGC- i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3351139 9 - 5030052 AGATTAGTA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86529199 9 - 129401213 AAATTAACA i mm10.chr8 C 0 I 1 s canFam3.chr16 16891896 9 - 59632846 agattggta i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1401270 8 - 2520184 -AGACGGTG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 954838 7 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=1264975.000000 s hg38.chr4_KI270789v1_alt 62876 154 + 205944 G-CAGCCCGTGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTCTAGGACGGGCCTCTCAC----------ATTGGG------------------CTTTATGGTGTCCGCGGCCTCAG--------TGTCAGTACTCTGCTCCTCCCCACAAGCAGCCCTGCTCAGTTTGCCCTGGGCTGGCAGGCTTTTTCTCTGT s panTro5.chr4 192854032 155 + 194502333 GCCAGCCCATGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTCTAGGACGGGCCCCTCAC----------ATTGGG------------------CTTTACGGTGTCTGCGGCCTCAG--------TGTCAGTACTCTGCTCCTCCCCACAAGCAGCCCTGCTCAGTTTGCCCTGGGCTGGCAGGCTTTTTCTCTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738253 155 + 195804263 GCCAGCCCATGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTCTAGGACGGGCCCCTCAC----------ATTGGG------------------CTTTACGGTGTCTGCGGCCTCAG--------TGTCAGTACTCTGCTCCTCCCCACAAGCAGCCCTGCTCAGTTTGCCCTGGGCTGGCAGGCTTTTTCTCTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774819 155 + 4876863 GCCAGCCCGTGCCTCCAGTGCCA--CTGTGGCAAGCC-----------------CTCTAGGACGGGCCCCTCAC----------ATTGGG------------------CTTTACGGTGTCCACGGCCTCAG--------TGTCAGCACTCTGCTCCTCCCCACAAGCAGCCCTGCTCAGTTTGCCCTGGGCTGGCAGGCTTTTTCTCTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660304 155 + 115148730 gccagcctgtgcctccagtgcca--ctgtggtgagcc-----------------ctctaggacgggcccctcac----------attggg------------------ctttctggtgtctgcagcctcag--------tgtcaacgctctgctactccccacaagcagccctgctcagtgtaccctgggctggcaggctttttctctgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188943899 154 + 190429646 GACAGCCCGTGCCTCCAGTGCCA--CTGTGGTGAGCC-----------------CTGTAGGACGGGCCCCTCAC----------GCTGGG------------------CTTTCTGGTGTCTGTGGCCTCAG--------TGTCCGCGCTCGGCTCCTCCCCACAAGCGGCCGTGCTCCGTTTGCCATGGGCTGGCAGGCTTTTCC-CTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891433 154 + 189454096 GACAGCCCGTGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTGTAGGACGGGCCCCTCAC----------GCTGGG------------------CTTTCTGGTGTCTGTGGCCTCAG--------TGTCCGCGCTCGGCTCCTCCCCACAAGCGGCCGTGCTCCGTTTGCCATGGGCTGGCGGGCTTTTCC-CTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269430 154 - 25927173 GACAGCCCGTGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTGTAGGACGGGCCCCTCAC----------ACTGGG------------------CTTTCTGGTGTCTGTGGCCTCAG--------TGTCCGTGCTCGGCTCCTCCCCACAAGTGGCCGTGCTCCGTTTGCCCTGGGCTGGCGGGCTTTTCC-CTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308688 154 + 4669795 GCCAGCCCGTGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTGTAGGACGGGCCTCTCAC----------TCTGGG------------------CTTTCTGGTGTCTATGGCCTCAG--------TGTCCGCGCTCGGCCCCTCCCCACAAGTGGCCGTGCTCCGTTTGCCCTGGGCTGGCGGGCTTTTTC-CTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267801 154 + 135778131 GCCAGCCCGTGCCTCCAGTGCCA--CTGTGGCGAGCC-----------------CTGTAGGACGGGCCCCTCAC----------ACTGGG------------------CTTTCTGGTGTCTGTGGCCTCAG--------TGTCAGCTCTCGGCTCCTCCCCACGAGCAGCCCTACTCCGTTTGCCCTGGGCTGGCGGGCTTTTTC-CTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2701132 162 - 2847728 GACAGCCCATGCCTCCAGTGCCA--CTGTGGTGAGCC-----------------CTGTAGGACGGGCCCCTCAC----------ACTGGG------------------CTTTCTGGTGTCTGTGGCCTCTGGTGTCTGTGGTCCGCGCTCTGCTCCTCCCCACAAGTGGCCGTGCTCCGTTTGCCCTGGGCTGGCGGACTTTTCC-CTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827556 155 + 2368649 GCCAGCCCGTGCCTCCAGTGCCG--CTGTGGTGAGCC-----------------CTGTAGGACAGGCCCCTCAC----------ACTGGG------------------ctttctggtgtctgtggcctcag--------tgtcagtgctctgctcctccccacaagtggccctgctcagtttgccctgggctggcaggctttttctctgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579353 167 - 190850796 --CAGCCCATGCCTCCCATGCTG--CAGTGGTGAGCc-----------------ctctagggtgggcccctcct----------gttggaaaa----cacttgctggcctttctggtgtctgcagcctgag--------ggtcagtgctctgctccttcccacacacagccctgctcagtcagccctggactggcaggtgccttctctgt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 954845 168 - 2196201 -gcctcccgtgcctcccgtgccG--CGGTGGCGAGCc-----------------ctctagggtgggcccctccc----------attggaaaa----cacttgctggcctttctggtgtctgtggcctgag--------ggtcagcgctctgctcctccccacacacagcccttctcagtcagccctgggctggcaggtgtcttctctgt i cebCap1.NW_016107886v1 I 7 C 0 s aotNan1.NW_018492112v1 3351148 168 - 5030052 -GCAGCCTGTGTCTCCCATGCCA--CGGTGGCAAGCc-----------------ctctaggatgggcccctccc----------gttggaaaa----cacttgctggcctttctggtatctgcggcctgag--------ggtcagcgctctgctcctccccacacacagccctgctcagtcagccctgggctggcaagtgtcttctctgt i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86529209 170 - 129401213 -GTAGTCTTTGCTTACCATTCCATTCTTTTGCGAGCA-----------------TGGAATGATGGGTTTCCCACAGGAA----TAGTGGGAGAACATTGTTTGTTGGCTTTTCTACCCTCTGTGGTGTTGG----------------CTCCTCTCTTCCCCTTA-GCAGCCAGGCTCAGAGTGCACTGGTCTCACACCCTTGGTG-CAGT i mm10.chr8 I 1 C 0 s canFam3.chr16 16891905 189 - 59632846 ggtggtccatgcctgccattcta--ctgtttcaagcaaggaattcatgttttggctttaggatggacctctcac----------aatgga-acatattctttgctggaatttctggtgtctgtggcccaaa--------tgtcagctttctgcttttgcccacaaggagccctggtcaatttgcgctgtgcttaccgccctcgcttctat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1401278 174 - 2520184 -GCGGTC-GTGTCCAGCATTCCG--CTGCTGCAGGCCAGGAATTTCAGTTTC--CCTGAGGAGGGGCCCTCCCCTGGAAAGTGTGCTGGG-------------------CCTCTGGGCTCTGTGCCC---A--------GGTCAGCTCTCCACTTCTTCCCACGAGCAGTCCTGCTCAGCTGGCATCGCACCTGCAGCCCTCCTCTCTAT i dasNov3.JH570353 C 0 I 221 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=286756.000000 s hg38.chr4_KI270789v1_alt 63030 38 + 205944 GTTGAGGTTTGGCATTTCACCTCACTCCTGTTTTCATT s panTro5.chr4 192854187 38 + 194502333 GTTGAGGTTTGGCATTTCACCTCACTCCTGTTTTCATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738408 38 + 195804263 GTTGAGGTTTGGCATTTCACCTCACTCCTGTTTTCATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3774974 38 + 4876863 GTTGAGGTTTGGCATTTCACCTCACTCCTGTTTTCATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660459 38 + 115148730 gttgtggtttggcatttcacctcactcctgttttcatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944053 37 + 190429646 CCTGTGGTTTGGCGTTTTACCTCACTGC-GTTTTCGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891587 37 + 189454096 CCTGTGGTTTGGCGTTTTACCTCACTGC-GTTTTCGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269584 37 - 25927173 CCTGTGGTTTGGCGTTTTACCTCACTGC-GTTTTCGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308842 37 + 4669795 CCTGTGGTTTGGCGTTTCACCTCACTGA-ATTTTCGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134267955 37 + 135778131 CTTGTGGTTTGGTGTTTCACCTCACTGC-GTTTTCGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2701294 37 - 2847728 CCTGTGGTTTGGCGTTTTACCTCACTGC-GTTTTCGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 827711 38 + 2368649 cttgtggtttggcgtttcacctcactgctgttttcatt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579520 38 - 190850796 tttgtggtttgCCATTTCACCTCACTGCTGTTTTCCAT i calJac3.chr3 C 0 I 303 s cebCap1.NW_016107886v1 955013 38 - 2196201 tttgtggtttggcgtttCACCTCACTGCTGTTTTCCAT i cebCap1.NW_016107886v1 C 0 I 321 s aotNan1.NW_018492112v1 3351316 38 - 5030052 tttgtggtttggcatttCACATCACTGCTGTTTTCCAT i aotNan1.NW_018492112v1 C 0 I 313 s mm10.chr8 86529379 37 - 129401213 GTAGTGCTGTGTGTCGTCGCCTCACCACTGTTTTCAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16892094 38 - 59632846 ttggtgttttggttttttaccacactgttggttttgat i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11192710 3281 - 11315646 I a score=561363.000000 s hg38.chr4_KI270789v1_alt 63068 56 + 205944 AAAAGTAGACTTTTCCTTTCTATTTCAAGTTCTGTGGATGATTTTGGGAGAATGTT s panTro5.chr4 192854225 56 + 194502333 AAAAGTAGACTTTTCCTTTCTATTTCAAGTTCTGTGGATGATTTTGGGAGAATGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738446 56 + 195804263 AAAAGTAGACTTTTCCTTTCTATTTCAAGTTCTGTGGATGATTTTGGGAGAATGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775012 56 + 4876863 AAAAGTAGACTTTTCCTTTCTATTTCAAGTTCTGTGGATGATTTTGGGAGAATGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660497 56 + 115148730 aaaagtagacttttcctttctatttcaagttctgtggatgattttaggagaaTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944090 56 + 190429646 CAACGTAGACTTCTCCTTTCTGTTTCAAGTTCTGTGGATGATTTTGGGAGAACGTT i rheMac8.chr5 C 0 I 162 s macFas5.chr5 187891624 56 + 189454096 CAACGTAGACTTCTCCTTTCTGTTTCAAGTTCTGTGGATGATTTTGGGAGAACGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269621 56 - 25927173 CAACGTAGAATTCTCCTTTCTGTTTCAAGTTCTGTGGATGATTTTGGGAGAACGtt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3308879 56 + 4669795 CAACGTAGAATTCTCCTTTCTGTTTCAAGGTCTGTGGATGATTTTGGGAGAACGTT i cerAty1.NW_012001672v1 C 0 I 6 s chlSab2.chr7 134267992 56 + 135778131 AAACGTAGACTTCTCCTTTCTGTTTCAAGTTCTGTGGATGATTTTGGGAGAACGtt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2701331 56 - 2847728 CAACGTAGAATTCTCCTTTCTGTTTCAAGGTCTGTGGATGATTTTGGGAGAACGTT i manLeu1.NW_012102221v1 C 0 M 4495 s colAng1.NW_012116221v1 827749 56 + 2368649 aaaagtagactttttctttctatttcaagttctgtggatgattttgggagaACGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189579861 56 - 190850796 AAAAGTAGACTTTTCCTTTCTATCTTGAGTTCTCTGGGTGATTCTGGGAGCGTGTT i calJac3.chr3 I 303 C 0 s cebCap1.NW_016107886v1 955372 55 - 2196201 AAAAGTAGACTTTTCCTTTCGATTTCCAGTTCTATGGGTGATGTTGAGCG-ATGCT i cebCap1.NW_016107886v1 I 321 C 0 s aotNan1.NW_018492112v1 3351667 56 - 5030052 aaaaGTAGACTTTTCCTTTCTATTTCAAGTTCTGCGGGTGATTTTGGGAGAATGTT i aotNan1.NW_018492112v1 I 313 C 0 s otoGar3.GL873580 11195991 56 - 11315646 AAAAGTGGACTTTTCCTTCCTGCTTTGAGTTCTGTGAGTCATTTGGGGGAAATGCT i otoGar3.GL873580 I 3281 I 1 s mm10.chr8 86529416 51 - 129401213 AAACATGGAAT-----TTTCTGTCTCAAATTCTGTGGGCTGCTTTTGGGAAATGCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16892132 54 - 59632846 taaaatggactttgcct--ctgtttttaattttatgggttattttggggaaatgct i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=30633.000000 s hg38.chr4_KI270789v1_alt 63124 5 + 205944 TTCTT s panTro5.chr4 192854281 5 + 194502333 TTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738502 5 + 195804263 TTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775068 5 + 4876863 TTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660553 5 + 115148730 TTCTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187891680 5 + 189454096 CTTTT i macFas5.chr5 C 0 I 19 s macNem1.NW_012013133v1 24269677 5 - 25927173 ctttt i macNem1.NW_012013133v1 C 0 I 25 s cerAty1.NW_012001672v1 3308941 5 + 4669795 TTCTT i cerAty1.NW_012001672v1 I 6 I 19 s chlSab2.chr7 134268048 5 + 135778131 ttttt i chlSab2.chr7 C 0 I 31 s colAng1.NW_012116221v1 827805 5 + 2368649 CTTTT i colAng1.NW_012116221v1 C 0 I 21 s calJac3.chr3 189579917 5 - 190850796 TTCTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955427 5 - 2196201 TTCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3351723 5 - 5030052 TTCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196048 4 - 11315646 TTTT- i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86529467 5 - 129401213 ATCTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16892186 5 - 59632846 atctt i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I e manLeu1.NW_012102221v1 2701387 4495 - 2847728 M e rheMac8.chr5 188944146 162 + 190429646 I a score=1285757.000000 s hg38.chr4_KI270789v1_alt 63129 167 + 205944 TATATC-ATCTGCAAAT----------AC---GCttcct-catttcccacctcgactttc--catctt---ccactttcaatctttTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----TGTGTGTGTGT------------------------------GTGAG s panTro5.chr4 192854286 169 + 194502333 TATATC-ATCTGCAAAT----------AG---GCttcct-catttcccacctcgactttc--catctt---ccactttcaatctttTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----TGTGTGTGTGT----------------------------GAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738507 167 + 195804263 TATATC-ATCTGCAAAT----------AG---GCttcct-catttcccacctcgactttc--catctt---ccactttcaatctttTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----TGTGTGTGTGT------------------------------GAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775073 181 + 4876863 TATATC-ATCTGCAAAT----------AC---GCTTCCT-CATTTCCCACCTCGACTTTC--CATCTA---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----tgtgtgtgtgtgtgtgtgagaga----------------gagagag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660558 177 + 115148730 TATGTC-ATCTGCAGAT----------AT---GCTTTCT-CATTTCCCACCTCGACGCTC--CATCTT---CCACTTTCAATGTTTTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----TCtgtgtgtgt----gtgtgtgt----------------gtgtgAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944308 170 + 190429646 tatata-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---TATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGA-GGTGAGATA----TTTTCAGAGTTGTATTTCC-AAGAATCCTTTCAATTTCTCCA-------TTTTTGCGCTTTATCAC----TGTGTGTGTGT----GTGA--------------------GAGAGAG i rheMac8.chr5 I 162 C 0 s macFas5.chr5 187891704 174 + 189454096 tatata-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---TATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGA-GGTGAGATA----TTTTCAGAGTTGTATTTCC-AAGAATCCTTTCAATTTCTCCA-------TTTTTGCGCTTTATCAA----tgtgtgtgtgt----gtgtgtgt----------------gAGAGAG i macFas5.chr5 I 19 C 0 s macNem1.NW_012013133v1 24269707 190 - 25927173 TATATC-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---TATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGA-GGTGGGATA----TTTTCAGAGTTGTATTTCC-AAGAATCCTTTCAATTTCTCCA-------TTTTTGCGCTTTATCAC----tgtgtgtgtgt----gtgtgtgtgtgtgtgtgagagagagagagag i macNem1.NW_012013133v1 I 25 C 0 s cerAty1.NW_012001672v1 3308965 174 + 4669795 TATATC-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---TATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGA-GGTGGGATA----TTTTCAGAGTTGTATTTCC-AAGAATCCTTTCAATTTCTCCA-------TTTTTGCGCTTTATCAC----tgtgtgtgtgt----gtgtgtgt----------------gAGAGAG i cerAty1.NW_012001672v1 I 19 C 0 s chlSab2.chr7 134268084 164 + 135778131 TATATATATCTGCAAAT----------AC---GCTGCCT-CATTTCCCACCTCAACTTT---CATCTT---CCACTTTCAATC-TTTC---TTTTTT--------------TGGAAGGAGGGTGGGATA----TTTTCAGAGTTGTATTTTCGAAGAATCCTTTCAATTTCTTCA-------TTTTTGCGCTTTATCAC----TGTGTGTGTGT----GT----------------------------G i chlSab2.chr7 I 31 C 0 s manLeu1.NW_012102221v1 2705920 174 - 2847728 tatata-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---TATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TGGAAGGA-GGTGGGATA----TTTTCAGAGTTGTATTTCC-AAGAATCCTTTCAATTTCTCCA-------TTTTTGCGCTTTATCAC----tgtgtgtgtgt----gtgtgtgt----------------gagagag i manLeu1.NW_012102221v1 M 4495 C 0 s colAng1.NW_012116221v1 827831 186 + 2368649 TATATC-ATCTGCAAAT----------AT---GCTCCCT-TATTTCCCACCTCGACTTT---CATCTT---CCACTTTCAATCTTTTC---TTTTTT--------------TAGAAGGAGGGTGGGATA----TTTTCAGAGTCGTATTTTCCAAGAATCCTTTCAATTTCTCCA-------TTTTTGCCCTTTATCAC----tgtgtgtgtgt----gtgtgtgtgtgtgtgtga------gagagag i colAng1.NW_012116221v1 I 21 C 0 s calJac3.chr3 189579922 169 - 190850796 TATATT-GTCTGCAGAT----------AG---GCTCCCT-CATTTCTCACGCCTACTTTC--CATCTT---CCACTTTCAGTCTTTTC---TTTTTT--------------TGGAAGCTGGGTGAGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATTTCTCCA-------TTTTTGCCCTTTTTCAT----------tgtgt----gtgtgtgt------------------gtgtg i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955432 178 - 2196201 TACATT-GTCTGCACAT----------AT---GCTCCCT-CATTTCTCACCTCTGCTTTC--CATCTT---CCACTTTCAGTCTTTTCTTTTTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCTTTCAATCTCTCCA-------TTTTTGCCCTTTTTCAT----tgtgtgtgtgt----gtgtgtgt------------------gtgtg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3351728 179 - 5030052 TGTATC-GTCTGCAGAT----------AC---GCTCCCT-CATTTCTCACCTCGACTTTC--CATCTT---CCACTTTCAGTCTTTTC---TTTTTT--------------TGGAAGGAGGGTGGGGTA----TTGTCAGAGTTGTATTTTCCAAGAGCCCCTTCAATTTCTCCA-------TCTTTGCCCTTTTTCATtgtgtgtgtgtgtgt----gtgcgtgc------------------gtgtg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196052 150 - 11315646 CACGTC-ATCTTCAAAC----------AG-------------------------------------------CAATTTCACCCTTTGT---CTTTTTCCCCCTGACAAAGATGGGAGGGGGATGAGAGGACGTTGGTCAGAATCGTCTTTTGCAAGAGCACTTTCTGCCTCCCCG-------TGTTTGCCCTTGATC-C----TATGTGTGTGC----ATATG-------------------------- i otoGar3.GL873580 C 0 I 15 s mm10.chr8 86529472 168 - 129401213 TACATC-ATGTTCAATC----------AGGAAGCACAGC-CCTTTGACCTCTTTTCCCTG--AATCTCTGGCCGGTTTTCTGCGTTTT---TCTCCA--------------TGAAGATTTGTGAAGACA---------GGAACCTAGTTTTTCAGAAGTCCTTTTTATGCATACT-------GGTTTATCCATCATGAT----TGTCTGTGCAT----GCAGA-------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16892191 189 - 59632846 tatatc-atcttcagaTTACATGTACAAC---Accccttatcttttttctccctactttccagatttc---ccaacttcttccaatcc---tttttt--------------tgaaggtatccatggata----tcgtcagaattgtattttccaagagtccttccccattctccaattgctctttttGAACCTTTTCAT----TGTGTGTCCAT----GTATATG------------------------ i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=42362.000000 s hg38.chr4_KI270789v1_alt 63296 9 + 205944 AGAAAGAga s panTro5.chr4 192854455 9 + 194502333 AGAGAGAga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738674 9 + 195804263 AGAGAGAga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775254 9 + 4876863 agagagaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660735 9 + 115148730 AGAGAGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944478 9 + 190429646 AGAGAGAga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891878 9 + 189454096 AGAGAGAga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269897 9 - 25927173 agagagaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309139 8 + 4669795 AGAGAgag- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268248 9 + 135778131 AGAGACAga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706094 9 - 2847728 agagagaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828017 9 + 2368649 agagagaga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580091 9 - 190850796 tgtgtgtgA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955610 9 - 2196201 tgtgtgtgA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3351907 9 - 5030052 tgtgtgtgA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86529640 7 - 129401213 TGAAAGA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16892380 9 - 59632846 TGTGtatga i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11196202 15 - 11315646 I a score=676823.000000 s hg38.chr4_KI270789v1_alt 63305 74 + 205944 catacagcatacatatagaaagatgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataata s panTro5.chr4 192854464 74 + 194502333 catacagcatacatatagaaagatgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738683 74 + 195804263 catacagcatacatatagaaagatgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775263 74 + 4876863 gatacagcatacatatagaaagacgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660744 74 + 115148730 CTtacagcgtacatacagaaagatgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944487 74 + 190429646 catacagcacacatatagaaagatgtgc-aaaatgtaaatgtata-tgtaacaagtggttataaagccatataatg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891887 74 + 189454096 catacagcacacatatagaaagatgtgc-aaaatgtaaatgtata-tgtaacaagtggttataaagccatataatg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269906 74 - 25927173 CATACAGCACACATATAGAAAGATGTGC-AAAATGTAAATGTATA-TGTAACAAGTGGTTATAAAGCCATATAATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309147 73 + 4669795 -agacagcacacatatagaaagatgtgc-aaaatgtaaatgtata-tttaacaagtggttataaagccatataatg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268257 74 + 135778131 catacagcatacatatagaaagatgtgc-aaaatgtaaatgtata-tttcacaagtggttataaagccatataatg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706103 74 - 2847728 gagacagCACACATATAGAAAGATGTGC-AAAATGTAAATGTATA-TGTAACAAGTGGTTATAAAGCCATATAATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828026 74 + 2368649 CATACAGCATACATATAGAAAGATGTGC-AAAATGTCAATGTGTA-TTTAACAAGTGGTTATAAAGCCGTATAATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580100 73 - 190850796 Catacagcatgactatagaaagatgtgc-aaaaatt-aatgcata-tttagcaagtagttataaagccatataata i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955619 70 - 2196201 CATACAGCATGCATAT----AGATGTGC-AAAAGTTAAATGCATA-TTTAACCAGTAGTTACAAAGCCATATAATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3351916 74 - 5030052 Catacagcatgaatataaaaagatgtgc-aaaaattaaatgcata-tttaacaagcagttataaagccatataata i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196217 69 - 11315646 CATGTCGAGTAC-TATGGaaaggtgtacaaaaatttagacgtgcagtttaacaa------ataaagccaaacgctt i otoGar3.GL873580 I 15 C 0 s mm10.chr8 86529647 70 - 129401213 CATGTAACATACACATAAAAAGACACAT--AAATTCAAATGGACA--CTGGTAGGTACATATAA--CAAAACAGTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16892389 73 - 59632846 catatgatatatgtatagagaggcacac-aaaacttaaatgtacaattttacaagtagtaataaagcca-atact- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1401452 221 - 2520184 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=362114.000000 s hg38.chr4_KI270789v1_alt 63379 31 + 205944 tgcaacaaccacacaggtaaagaaataaagt s panTro5.chr4 192854538 31 + 194502333 tgcagcaaccacacaggtaaagaaataaagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738757 31 + 195804263 tgcagcaaccacacaggtaaagaaataaagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775337 31 + 4876863 tgcaacaaccacacaggtaaagaaataaagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660818 31 + 115148730 tgcaataaccacgcaggtgaagaaataaagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944561 31 + 190429646 tgcaacaaccacacaggtgaagaaataaagt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891961 31 + 189454096 tgcaacaaccacacaggtgaagaaataaagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24269980 31 - 25927173 TGCAACAACCACACAGGTGAAGAAATAAAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309220 31 + 4669795 tgcaacaaccacacaggtgaaaaaataaagt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268331 31 + 135778131 tgcaacaaccacacaggtgaagaaataaagt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706177 31 - 2847728 TGCAACAACCACACAGGTGAAGAAATAAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828100 31 + 2368649 TGCAAAAACCACACAGGTGaagaaataaagt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580173 31 - 190850796 tgcagcaaccacacaggtgaagaaataaagt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955689 31 - 2196201 GGCAGCAACCACACCGGTGAAGAAATAAAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3351990 31 - 5030052 tgcagcaaccacactggtgaagaaataaagt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196286 31 - 11315646 tgaaacagccatacaggtgaagaaattaagt i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86529717 31 - 129401213 TATAAAAACTATATAGGCAAAGAGATTAAAT i mm10.chr8 C 0 I 741 s canFam3.chr16 16892462 28 - 59632846 ---aaaaataacacaagtgaagaaatgaagc i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1401673 30 - 2520184 TGTAGCAGGTACACAGGTCGAGGGACCAGT- i dasNov3.JH570353 I 221 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=1265.000000 s hg38.chr4_KI270789v1_alt 63410 1 + 205944 -c s panTro5.chr4 192854569 1 + 194502333 -c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738788 1 + 195804263 -c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775368 1 + 4876863 -c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660849 1 + 115148730 -c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944592 1 + 190429646 -c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891992 1 + 189454096 -c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270011 1 - 25927173 -C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309251 1 + 4669795 -c i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268362 1 + 135778131 -c i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706208 1 - 2847728 -C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828131 1 + 2368649 -g i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580204 1 - 190850796 -c i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955720 1 - 2196201 -C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352021 1 - 5030052 -c i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196317 1 - 11315646 -c i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1401703 1 - 2520184 A- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892490 1 - 59632846 I e mm10.chr8 86529748 741 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=1706985.000000 s hg38.chr4_KI270789v1_alt 63411 222 + 205944 ttaccaaaacct-agcagtctcccaggtgtc---cctctccagtcaccacactcttcctcatg-ccccta---ccccagtacccccaggagtcaaacacttttctgcctttagtgtcatcatgtcttagctgtgtttataattttaccacctatatatgcattacg--aaaGA-GCTGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAAAGATACTTAG s panTro5.chr4 192854570 222 + 194502333 ttaccaaaacct-agcagtctcccaggtgtc---cctctccagtcaccacactcttcctcatg-ctccta---ccccagtacccccaggagtcaaacacttttctgcctttagtgtcatcatgtcttagctgtgtttataattttaccacctatatatgcattacg--aaaGA-GCTGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAAAGATACTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192738789 222 + 195804263 ttaccaaaacct-agcagtctcccaggtgtc---cctctccagtcaccacactcttcctcatg-ctccta---ccccagtacccccaggagtcaaacacttttctgcctttagtgtcatcatgtcttagctgtgtttataattttaccacctatatatgcattacg--aaaGA-GCTGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAAAGATACTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775369 209 + 4876863 ttaccaaaacct-agcagtctcccag---------------agtcaccacactcttcctcatg-c-ccta---ccccagtagccccaggagtcaaacacttttctgcctttagtgtcatcatgtcttagctgtgtttataattttaccacctatatatgcattacg--aaaGA-GCTGCTTCTCT--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAAAGATACTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112660850 221 + 115148730 ttaccaaaacct-agcagtctcccaggtgtc---cgtctccaatcaccacactcttcctcatg-ccccca---ccccagtacccccaggagtcaaacacttttctgcctttagtgtcatcatgtcttagctgtgtttataattttaccacctatacatgcattacg--aaaca-GCTGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGATAC-TAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944593 202 + 190429646 ttactgaaacct-aacagtcccccaggtgt----------------------tcttcctcatg-ctccca---ccccagtaaccccaggagtcaaacccttttctgccttcagtgtcatcatgtcttagctgtgtttataattttacctcctatatatgcatTATG--AAAGA-GCTGCTGCTTC--TTGCTATCTCTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGCTAT-TAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187891993 202 + 189454096 ttactgaaacct-aacagtcccccaggtgt----------------------tcttcctcatg-ctccca---ccccagtaaccccaggagtcaaacccttttctgctttcagtgtcatcatgtcttagctgtgtttataattttacctcctatatatgcatTATG--AAAGA-GCTGCTGCTTC--TTGCTATCTCTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGCTAT-TAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270012 202 - 25927173 TTCCTGAAACCT-AACAGTCCCCCAGGTGT----------------------TCCTCCTCATG-CTCCCA---CCCCAGTAACCCCAGGAGTCAAACCCTTTTCTGCCTTCAATGTCATCATGTCTTAGCTGTGTTTATAATTTTACCTCCTATATATGCATTATG--AAAGA-GCTGCTGCTTC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGCTAT-TAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309252 202 + 4669795 ttactgaaacct-aacagtcccccaggtgt----------------------tcctcctcatg-ctccca---ccccagtaaccccaggagtcaaacccttttctgccttcagtgtcatcatgtcttagctgtgtttataactttacctcctatatatgcatTATG--AAAGA-GCTGCTGCTTC--TTGCTATCTTTTTCTTGCTGTAC-------G---TCTTGTATCTTCAGAGCTAT-TAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268363 202 + 135778131 ttactgaaacct-aatagtcccccaggtgt----------------------tcctcctcatg-ctccca---ccccagtaaccccaggagtcaaacacttttctgccttcagtgtcatcatgtcttagctgtgtttgtaactttacctcctatatatgcatTATG--AAAGA-GCTGCTGCTTC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGATAT-TAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706209 202 - 2847728 TTACTGAAACCT-AACAGTCCCCCAGGTAT----------------------TCCTCCTCATG-CTCCCA---CCCCAGTAACCCCAGGAGTCAAACCCTTTTCTGCCTTCAGTGTCATCATGTCTTAGCTGTGTTTATAACTTTACCTCCTATATATGCATTATG--AAAGA-GCTGCTGCTGC--TTGCTATCTCTTTCTTGCTGTAG-------G---TCTTGTATCTTCAGAGCTAT-TAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828132 202 + 2368649 ttactgaaacct-aacagtcccccaggtgt----------------------tcctcctcgtg-ctgcca---ccccagtaaccccaggagtcaaacacttttctgccttcagtgtcatcatgtcttagctgtgtttataattttacctcctatatatgcatTATG--AAAGA-GCTGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTCCAGAGATAT-TAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580205 214 - 190850796 ttacccaaacct-agcagccgtgcaggagt----ccctccccatcaccacactcttccccatg-cccccg---ccctgatactcccaggagtcaaacacgtttctgcctt-agtgtcatc-tgccttagct--gtttataatttcaccatctat--atgcattacg--aaaca-GCGGCTTCTCC--TTGCTACCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCCAAGATAT-GAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955721 215 - 2196201 TTACCAAAACCT-AGCAGCCTGGCAGGAGT----CCCTCCCCATCGCCACACTCTTCCCCAGG-CCCCCG---CCCCAATACCCCCAGGAGTCAAACACTTTTCTACCTT-AGTGTCATC-TGCCTTAGCTGAGTTTATAATTTCA-CATCTAT--GTGCATTACG--AAAGG-GTGACTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCCAAGATAT-TAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352022 217 - 5030052 ttactgaaacct-agcagccttccaggagt----ccctccccattaccacactcttctccatgccccccc---ccccgacacccccaggagtcaaacacttttctgcctt-agtgtcacc-tgccttagctgtgtttctaatttcaccatctac--acgcatcacg--aaaGA-GTGGCTTCTCC--TTGCTATCTTTTTCTTGCTGTAG-------G---TCTTGTATCTTCTAAGATAT-TAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11196318 183 - 11315646 ttctcaaggcctcagccgtgctctgggtgt----------------------ccttccccacc-------------------------gag---acccctttttTACCTTCAACATAATCATTTCTTAGTTCTGTTTATAGTTTTATCCCCTCCATATGCACTCCG--AGAGGTGACTCCTCGCC--TTAGGATCTTCCTCTGGCTGTAA-------GTCTTCTTTTATCTTCAAGTGTAT-TAG i otoGar3.GL873580 C 0 I 801 s mm10.chr8 86530489 224 - 129401213 ttgctagcacctcagaaatttcctaagtat------ctgtctatcccaac--acttcacagag-cccctgaatccctagatcccccaaacaaacatcttttttctctgtttactgttgccatttcttaattatgtttacagttttaccgcctacgttttcattactTCAGATG-ACTGCT-CTCC--TAATTATGTTTTTCTTGTTTCAG-------GGCTCCTTGTGTCCTCAAGCCTAT-TAG i mm10.chr8 I 741 C 0 s canFam3.chr16 16892491 169 - 59632846 ctaccacacttt-tatagtccccagtgcatccctcccttccaatcacaacagtctccaccaca-cactca-----------------ataggcaactacttttctgtccttattgtaatcatttctcaattttgcttctaattttaccacctac--atgcattacc--taGTA-ATTTCT-CTCC--TTCGTATCT------------------------------------------------- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1401704 204 - 2520184 CTGCTGAGacctcagcagtcccc-----gc----ctgcccccgtcacagcgctcttcc------caccca---cccca----------aaggcaaccacttttgtgaatttagcg------ttccttggttgtgtttgtaactgcaccactaaagtccgcattgct--aagtg-attattccttccttcactatctgtcgcttgctgatgaatgcttg---ccttgcattttcaaggacat-tag i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=685913.000000 s hg38.chr4_KI270789v1_alt 63633 77 + 205944 AAATAGGGTTCCG-AATATAACTTTTTCTGTTTCTG-CA--CTCTCTCTCTTCTTTTGTGTTTCCTTTAATCTGTCAGACT s panTro5.chr4 192854792 77 + 194502333 AAATAGGGTTCCG-AATATAACTTTTTCTGTTTCTG-CA--CTCTCTCTCTTCTTTTGTGTTTCCTTTAATCTGTCAGACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739011 77 + 195804263 AAATAGGGTTCCG-AATATAACTTTTTCTGTTTCTG-CA--CTCTCTCTCTTCTTTTGTGTTTCCTTTAATCTGTCAGACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775578 72 + 4876863 AAATAGGGTTCCG-AATATAACTTTTTCTGTTTCTG-CA--CTCTCTCTC-----TTGTGTTTCCTTTAATCTGTCAGACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661071 77 + 115148730 AAATAGGGTTCCG-AATATAACTTTTTCTGTTTCTG-CA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944795 77 + 190429646 AAATAGGGTTCCG-AATAAAACTTTTTCTGTTTCTG-CA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892195 77 + 189454096 AAATAGGGTTCCG-AATAAAACTTTTTCTGTTTCTG-CA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270214 77 - 25927173 AAATAGGGTTCCG-AATAAAACTTTTTCTGTTTCTG-CA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309454 77 + 4669795 AAATAGGGTTCCA-AATAAAACTTTTTCTGTTTCTG-CG--CACTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268565 77 + 135778131 AAATAGGGTTCCA-AATAAAACGTTTTCTGTTTCTG-CA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706411 75 - 2847728 AAATAGGGTTCCG-AATAAAACTTTTTCTGTTTCTG-CG----CTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828334 77 + 2368649 AAATAGGGTTCCG-AATAAAACTTTTTCTGTTTCTG-TA--CTCTCTCCCTTCTTCTGTGTTTCCTTTAATCTGTCAGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580419 78 - 190850796 CAAGAGCGTTCTGAAATGTAACTTTTTCTGTTTCTG-CA--TTCTCTCCCTTCTTCTGTGTTCCGTTTAATCTGTCAGATG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 955936 78 - 2196201 CAATAGGGTTCTGAAATATAACTCTTTCTGTTTCTG-TG--TTCTCTCCCTTCTCCTGTGTTTCCTTTACTCTGTCAGATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352239 78 - 5030052 CAATAGGGTTATGAAATATAACTTTTTCTGTTTCTG-CA--TTCTCTCCCTTCTTCTGTGTTTCCTTTGATCTGTCAGATC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197302 77 - 11315646 AAACAGGCTTTTA-AATATAACTTCTTCTGGTTTTG-AA--ATCTCTCTCTTCCTCTTGGCTTCCTTTAATGTCTTTGATT i otoGar3.GL873580 I 801 C 0 s mm10.chr8 86530713 74 - 129401213 GAAGAGGCCTAAA-AATATCACTACT-----CTCTG-CAGCATCCCTCCTTCCTCTTGGGTACCTTTCAATCTGCCAGATG i mm10.chr8 C 0 C 0 s canFam3.chr16 16892660 36 - 59632846 ---------------------------------------------CTTTCTTTTTGTAAGTCTtcttgtatctttaagggt i canFam3.chr16 C 0 I 136 s dasNov3.JH570353 1401908 64 - 2520184 -aatcaggttttt-aaaaaagtaacttctgtttccgaca---------catttgcctggg------ttagtctatttgatt i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=257058.000000 s hg38.chr4_KI270789v1_alt 63710 26 + 205944 GATTTTGTTCCACTCA-CATGAAAACT s panTro5.chr4 192854869 26 + 194502333 GATTTTGTTCCACTCA-CATGAAAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739088 26 + 195804263 GATTTTGTTCCACTCA-CATGAAAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775650 26 + 4876863 GATTTTGTTCCACTCA-CATGAAAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661148 26 + 115148730 GAGTTTGTTCCACTTA-TATGAAAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944872 26 + 190429646 GATTTTGTTCCACTCA-TGTGAAAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892272 26 + 189454096 GATTTTGTTCCACTCA-TGTGAAAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270291 26 - 25927173 GATTTTGTTCCACTCA-TGGGAAAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309531 26 + 4669795 GATTTTGTTCCACTCA-TGTGAAAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268642 26 + 135778131 GATTTTGTTCCACTCA-TATGAAAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706486 26 - 2847728 GATTTTGTTCCACTCA-TGTGAAAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828411 26 + 2368649 GATTTTGTTCCACTCA-TATGAAAAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580497 24 - 190850796 GATTTTGTTCCGCTCA-TATGAAAA-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 956014 26 - 2196201 GATTTTGTGCCACTCA-CATGAAAACT i cebCap1.NW_016107886v1 C 0 I 31 s aotNan1.NW_018492112v1 3352317 26 - 5030052 GATTTTGTTCCACTCA-TATGAAAACT i aotNan1.NW_018492112v1 C 0 I 36 s otoGar3.GL873580 11197379 26 - 11315646 GGTTTTGTTCCTCTCC-TATTGGAAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86530787 26 - 129401213 GATTTTGTTCTGCCAA-TATTAAATAC i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1401972 27 - 2520184 gatcttttccctcttactattgaacat i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=119751.000000 s hg38.chr4_KI270789v1_alt 63736 16 + 205944 CTGTCCCCAGTGCCTC s panTro5.chr4 192854895 16 + 194502333 CTGTCCCCAGTGCCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739114 16 + 195804263 CTGTCCCCAGTGCCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775676 16 + 4876863 CTGTCCCCAGTGCCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661174 16 + 115148730 CTGTCCCAAATGCCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944898 16 + 190429646 CTCTCCCAAATGCCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892298 16 + 189454096 CTCTCCCAAATGCCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270317 16 - 25927173 CTCTCCCAAATGCCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309557 16 + 4669795 CTCTCCCAAATGCCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268668 16 + 135778131 CTCTCCCAAATGCCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706512 16 - 2847728 CTCTCCCAAATGCCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828437 16 + 2368649 GTCTCCCAAATGCCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580521 16 - 190850796 CTGTCTCAAATGCCTC i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11197405 16 - 11315646 TTGTCTCAAGTGCCAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86530813 15 - 129401213 TTGTCCCCAGTGCCT- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1401999 16 - 2520184 ttctctcaaatgctta i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=56850.000000 s hg38.chr4_KI270789v1_alt 63752 13 + 205944 CTGATCCTTGCCT s panTro5.chr4 192854911 13 + 194502333 CTGATCCTTGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739130 13 + 195804263 CTGATCCTTGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775692 13 + 4876863 CTGATCCTTGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661190 13 + 115148730 CTGATGCTTGGCT i nomLeu3.chr7b C 0 I 3 s rheMac8.chr5 188944914 13 + 190429646 CTGATCTGTGGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892314 13 + 189454096 CTGATCTGTGGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270333 13 - 25927173 CTGATCTGTGGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309573 13 + 4669795 CTGGTCTGTGGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268684 13 + 135778131 GTGATCTGTGGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706528 13 - 2847728 CTGGTCTGTGGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828453 13 + 2368649 CTGATCTGTAGCT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11197421 13 - 11315646 TTGATTTTCGGTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86530828 7 - 129401213 ---TTCTTTC--- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1402015 13 - 2520184 ttgagccttgact i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189580537 0 - 190850796 C e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=15188.000000 s hg38.chr4_KI270789v1_alt 63765 3 + 205944 CTG s panTro5.chr4 192854924 3 + 194502333 CTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739143 3 + 195804263 CTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775705 3 + 4876863 CTG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188944927 3 + 190429646 CTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892327 3 + 189454096 CTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270346 3 - 25927173 CTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309586 3 + 4669795 CTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268697 3 + 135778131 CTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706541 3 - 2847728 CTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828466 3 + 2368649 CTG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11197434 3 - 11315646 CTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86530835 3 - 129401213 TTG i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1402028 2 - 2520184 ct- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189580537 0 - 190850796 C e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e nomLeu3.chr7b 112661203 3 + 115148730 I a score=90860.000000 s hg38.chr4_KI270789v1_alt 63768 13 + 205944 CATTCATGACTAA s panTro5.chr4 192854927 13 + 194502333 CATTCATGACTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739146 13 + 195804263 CATTCATGACTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775708 13 + 4876863 CATTCGTGACTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661206 13 + 115148730 CATTCATGAGTAA i nomLeu3.chr7b I 3 C 0 s rheMac8.chr5 188944930 13 + 190429646 CATTCATGAGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892330 13 + 189454096 CATTCATGAGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270349 13 - 25927173 CATTCATGAGTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309589 13 + 4669795 CATTCATGAGTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268700 13 + 135778131 CATTCATGAGTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706544 13 - 2847728 CATTCATGAGTAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828469 13 + 2368649 CATTCATGAGTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580537 13 - 190850796 CATTGATGACTAG i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11197437 13 - 11315646 CACTCCTGTGTAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86530838 13 - 129401213 CACTGATGATAAA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1402030 7 - 2520184 ----cataagt-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=120337.000000 s hg38.chr4_KI270789v1_alt 63781 17 + 205944 GTGTGATGCACTGGGAG s panTro5.chr4 192854940 17 + 194502333 GTGTGATGCACTGGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739159 17 + 195804263 GTGTGATGCACTGGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775721 17 + 4876863 GCGTGATGCACTGGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661219 16 + 115148730 GTGTGATGCACTGGG-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944943 17 + 190429646 GTGTGATGCACTGGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892343 17 + 189454096 GTGTGATGCACTGGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270362 17 - 25927173 GTGTGATGCACTGGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309602 17 + 4669795 GTGTGACGCACTGGGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268713 17 + 135778131 GTGTGATGCTCTGAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706557 17 - 2847728 GTGTGATGCACTGGGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828482 17 + 2368649 GTGTGATGCACTGGGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580550 17 - 190850796 GTGCGACGTACTGGGAA i calJac3.chr3 C 0 C 0 s mm10.chr8 86530851 17 - 129401213 AACTTGGGCTCCGGGGG i mm10.chr8 C 0 I 500 s dasNov3.JH570353 1402037 17 - 2520184 gtgtgttacactaggaa i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=98294.000000 s hg38.chr4_KI270789v1_alt 63798 13 + 205944 ATGACTGGGAGTC s panTro5.chr4 192854957 13 + 194502333 ATGATTGGGAGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739176 13 + 195804263 ATGATTGGGAGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775738 13 + 4876863 ATGATTGGGAGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661235 13 + 115148730 ATGATTGGGAGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944960 13 + 190429646 ATGACTGGGAGTC i rheMac8.chr5 C 0 I 16 s macFas5.chr5 187892360 13 + 189454096 ATGACTGGGAGTC i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24270379 13 - 25927173 ATGACTGGGAGTC i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3309619 13 + 4669795 ATGACTGGGAGTC i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134268730 13 + 135778131 ATGACTGGGAGTC i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2706574 13 - 2847728 ATGACTGGGAGTC i manLeu1.NW_012102221v1 C 0 I 16 s colAng1.NW_012116221v1 828499 13 + 2368649 ATGACTGGGAGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580567 13 - 190850796 ATGACTGGGGGTC i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1402054 13 - 2520184 aagattggaggtt i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=2329.000000 s hg38.chr4_KI270789v1_alt 63811 1 + 205944 C s panTro5.chr4 192854970 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739189 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775751 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661248 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892374 1 + 189454096 C i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24270393 1 - 25927173 C i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3309633 1 + 4669795 C i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134268744 1 + 135778131 C i chlSab2.chr7 I 1 C 0 s colAng1.NW_012116221v1 828512 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580580 1 - 190850796 C i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402067 0 - 2520184 C e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=12803.000000 s hg38.chr4_KI270789v1_alt 63812 15 + 205944 GTA--GGGAGTGGGCGT s panTro5.chr4 192854971 15 + 194502333 GTA--GGGAGTGGGCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739190 15 + 195804263 GTA--GGGAGTGGGCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775752 14 + 4876863 GTA--TGGGAT-GGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661249 16 + 115148730 CTAT-GGGAGTGGGCGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892375 14 + 189454096 ---ATGGGAGGGTGTGT i macFas5.chr5 C 0 T 74 s macNem1.NW_012013133v1 24270394 14 - 25927173 ---ATGGGAGGGTGTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309634 14 + 4669795 ---ATGGGAGGGTGTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268745 14 + 135778131 ---ATGGGAGGGTGTGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189580581 16 - 190850796 -GGATGGGAGTGGGCGT i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1402067 14 - 2520184 ---tagtatgtgggcgg i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=9884.000000 s hg38.chr4_KI270789v1_alt 63827 9 + 205944 ATTGGCCAG s panTro5.chr4 192854986 9 + 194502333 ATTGGCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739205 9 + 195804263 ATTGGCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775766 9 + 4876863 ATTGGCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661265 9 + 115148730 ATTGGCCAG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189580597 9 - 190850796 ACTGGCCAG i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1402081 3 - 2520184 ----gct-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e macFas5.chr5 187892389 74 + 189454096 T e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=5251.000000 s hg38.chr4_KI270789v1_alt 63836 5 + 205944 TGGTC s panTro5.chr4 192854995 5 + 194502333 TAGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739214 5 + 195804263 TAGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775775 5 + 4876863 TGGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661274 5 + 115148730 TGGTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892315 5 + 189454096 TGATC i macFas5.chr5 T 74 C 0 s calJac3.chr3 189580606 5 - 190850796 TGGTC i calJac3.chr3 C 0 T 74 s dasNov3.JH570353 1402084 2 - 2520184 ta--- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=5702.000000 s hg38.chr4_KI270789v1_alt 63841 7 + 205944 CTTGCCT s panTro5.chr4 192855000 7 + 194502333 CTTGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739219 7 + 195804263 CTTGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775780 7 + 4876863 CTTGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661279 7 + 115148730 CTTGCCT i nomLeu3.chr7b C 0 T 83 s macFas5.chr5 187892320 7 + 189454096 TGTGGCT i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1402086 7 - 2520184 ctgacct i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189580611 74 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=6111.000000 s hg38.chr4_KI270789v1_alt 63848 3 + 205944 CTG s panTro5.chr4 192855007 3 + 194502333 CTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739226 3 + 195804263 CTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775787 3 + 4876863 CTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661203 3 + 115148730 CTG i nomLeu3.chr7b T 83 C 0 s macFas5.chr5 187892327 3 + 189454096 CTG i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1402093 3 - 2520184 ctg i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189580611 74 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=84982.000000 s hg38.chr4_KI270789v1_alt 63851 68 + 205944 CATTCATGACTAAGTGTGATGCACTGGGAGATGACTGGGAGTCCGTA-GGGAGTGGGCGTATTGGCCAG- s panTro5.chr4 192855010 68 + 194502333 CATTCATGACTAAGTGTGATGCACTGGGAGATGATTGGGAGTCTGTA-GGGAGTGGGCGTATTGGCCAG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739229 67 + 195804263 CATTCATGACTAAGTGTGATGCACTGGGAGATGATTGGGAGTCCGTA-TGGGAT-GGCGTATTGGCCAG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775790 68 + 4876863 CATTCGTGACTAAGTGTGATGCACTGGGAGATGATTGGGAGTCTGTA-GGGAGTGGGCGTATTGGCCAG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661206 68 + 115148730 CATTCATGAGTAAGTGTGATGCACTGGG-GATGATTGGGAGTCCCTATGGGAGTGGGCGTATTGGCCAG- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892330 68 + 189454096 CATTCATGAGTAAGTGTGATGCACTGGGAGATGACTGGGAGTCTCAT-GGGAGGGTGTGTATTGGCCAA- i macFas5.chr5 C 0 T 83 s calJac3.chr3 189580537 69 - 190850796 CATTGATGACTAGGTGCGACGTACTGGGAAATGACTGGGGGTCCGGATGGGAGTGGGCGTACTGGCCAG- i calJac3.chr3 T 74 C 0 s dasNov3.JH570353 1402096 12 - 2520184 ----------------------------------------------------------ggattagcagag i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=10334.000000 s hg38.chr4_KI270789v1_alt 63919 5 + 205944 TGGTC s panTro5.chr4 192855078 5 + 194502333 TAGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739296 5 + 195804263 TAGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775858 5 + 4876863 TGGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661274 5 + 115148730 TGGTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892315 5 + 189454096 TGATC i macFas5.chr5 T 83 C 0 s calJac3.chr3 189580606 5 - 190850796 TGGTC i calJac3.chr3 C 0 T 77 s dasNov3.JH570353 1402108 5 - 2520184 tgatc i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=4187.000000 s hg38.chr4_KI270789v1_alt 63924 7 + 205944 ---CTTGTCT s panTro5.chr4 192855083 7 + 194502333 ---CTTGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739301 7 + 195804263 ---CTTGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775863 7 + 4876863 ---CTTGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661279 7 + 115148730 ---CTTGCCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892320 7 + 189454096 ---TGTGGCT i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1402113 7 - 2520184 gtttttg--- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189580611 77 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=52830.000000 s hg38.chr4_KI270789v1_alt 63931 33 + 205944 CTGCATTCATGACTAAGTGTGATGCACTGGGAG s panTro5.chr4 192855090 33 + 194502333 CTGCATTCATGACTAAGTGTGATGCACTGGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739308 33 + 195804263 CTGCATTCATGACTAAGTGTGATGCACTGGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775870 33 + 4876863 CTGCATTCATGACTAAGCGTGATGCACTGGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661286 29 + 115148730 GTGCATTCA----TAAGTGTGATGCACTGGGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892327 33 + 189454096 CTGCATTCATGAGTAAGTGTGATGCACTGGGAG i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580534 33 - 190850796 CTCCATTGATGACTAGGTGCGACGTACTGGGAA i calJac3.chr3 T 77 C 0 s dasNov3.JH570353 1402120 31 - 2520184 ttgagtgca-gtctaaatgtca-gCGTTGAGAG i dasNov3.JH570353 C 0 I 195 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=31101.000000 s hg38.chr4_KI270789v1_alt 63964 38 + 205944 ATGACTGGGAGTCCGTA-GGGAGTG----------------------------------------------------------------------------------GGTGTATTGGCCAG s panTro5.chr4 192855123 120 + 194502333 ATGATTGGGAGTCCGTA-GGGAGTGGGCGTATTGGCCAGTAGTCCTTGCCTCTGCATTCATGACTAAGTGTGATGCACTGGGAGATGACTGGGAGTCCGTATGGGATGGCGTATTGGCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739341 38 + 195804263 ACGACGGGGAGTCCGTA-GGGAGTG----------------------------------------------------------------------------------GGTGTATTGGCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775903 37 + 4876863 ATGATTGGGAGTCCGTA-TGGGAT-----------------------------------------------------------------------------------GGCGTATTGGCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661315 37 + 115148730 ATGATTGGGAGTACGTA-TGGGAT-----------------------------------------------------------------------------------GGCGTATTGGCCAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892360 38 + 189454096 ATGACTGGGAGTCTCAT-GGGAGGG----------------------------------------------------------------------------------TGTGTATTGGCCAA i macFas5.chr5 C 0 T 83 s calJac3.chr3 189580567 39 - 190850796 ATGACTGGGGGTCCGGATGGGAGTG----------------------------------------------------------------------------------GGCGTACTGGCCAG i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=9336.000000 s hg38.chr4_KI270789v1_alt 64002 5 + 205944 TGGTC s panTro5.chr4 192855243 5 + 194502333 TGGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739379 5 + 195804263 TGGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775940 5 + 4876863 TGGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661352 5 + 115148730 TGGTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892315 5 + 189454096 TGATC i macFas5.chr5 T 83 C 0 s calJac3.chr3 189580606 5 - 190850796 TGGTC i calJac3.chr3 C 0 T 77 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=7290.000000 s hg38.chr4_KI270789v1_alt 64007 7 + 205944 CTTGGCT s panTro5.chr4 192855248 7 + 194502333 CTTGGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739384 7 + 195804263 CTTGGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775945 7 + 4876863 CTTGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661357 7 + 115148730 CTTGCCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892320 7 + 189454096 TGTGGCT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189580611 77 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=73093.000000 s hg38.chr4_KI270789v1_alt 64014 61 + 205944 CTGCATTCATGACTAAGTGTGATGCACTGGGAGATGACTGGGAGTCC----GTAGGGA-GTGGGTG- s panTro5.chr4 192855255 61 + 194502333 CTGCATTCATGACTAAGTGTGATGCACTGGGAGATGACTGGGAGTCC----GTAGGGA-GTGGGCG- i panTro5.chr4 C 0 I 412 s panPan2.chr4 192739391 60 + 195804263 CTGCATTCATGACTAAGTGTGATGCACTGGGAGATGATTGGGAGTCC----GTATGGG-ATGGCC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3775952 60 + 4876863 CTGCATTCATGACTAAGTGTGATGCACTGGGAGATGATTGGGAGTCC----GTATGGG-ATGGCG-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661364 56 + 115148730 GTGCATTCA----TAAGTGTGATGCACTGGGAGATGATTGGGAGTAC----GTATGGG-ATGGCG-- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892327 61 + 189454096 CTGCATTCATGAGTAAGTGTGATGCACTGGGAGATGACTGGGAGTCTCATGGGAGGGT-GTG----- i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580534 62 - 190850796 CTCCATTGATGACTAGGTGCGACGTACTGGGAAATGACTGGGGGTCC----GGATGGGAGTGGGC-G i calJac3.chr3 T 77 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=5001.000000 s hg38.chr4_KI270789v1_alt 64075 3 + 205944 TAT s panTro5.chr4 192855728 3 + 194502333 TAT i panTro5.chr4 I 412 C 0 s panPan2.chr4 192739451 3 + 195804263 TAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776012 3 + 4876863 TAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661420 3 + 115148730 TAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892388 3 + 189454096 TAT i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580596 3 - 190850796 TAC i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e canFam3.chr16 16892696 136 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=27685.000000 s hg38.chr4_KI270789v1_alt 64078 12 + 205944 TGGCCAGTGGTC s panTro5.chr4 192855731 12 + 194502333 TGGCCAGTGGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739454 12 + 195804263 TGGCCAGTGGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776015 12 + 4876863 TGGCCAGTGGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661423 12 + 115148730 TGGCCAGTGGTC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892391 12 + 189454096 TGGCCAATGGTC i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580599 12 - 190850796 TGGCCAGTGGTC i calJac3.chr3 C 0 T 74 s canFam3.chr16 16892832 12 - 59632846 tgccaagtgatc i canFam3.chr16 I 136 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=2100.000000 s hg38.chr4_KI270789v1_alt 64090 1 + 205944 C s panTro5.chr4 192855743 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739466 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776027 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661435 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892403 1 + 189454096 C i macFas5.chr5 C 0 T 83 s canFam3.chr16 16892844 1 - 59632846 c i canFam3.chr16 C 0 C 0 e calJac3.chr3 189580611 74 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=11320.000000 s hg38.chr4_KI270789v1_alt 64091 9 + 205944 TTGGCTCTG s panTro5.chr4 192855744 9 + 194502333 TTGGCTCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739467 9 + 195804263 TTGGCTCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776028 9 + 4876863 TTGGCTCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661436 9 + 115148730 TTGCCTGTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892321 9 + 189454096 GTGGCTCTG i macFas5.chr5 T 83 C 0 s canFam3.chr16 16892845 9 - 59632846 ttgcctttc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189580611 74 - 190850796 T e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=26519.000000 s hg38.chr4_KI270789v1_alt 64100 17 + 205944 CATTCATGACTAAGTGT s panTro5.chr4 192855753 17 + 194502333 CATTCATGACTAAGTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739476 17 + 195804263 CATTCATGACTAAGTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776037 17 + 4876863 CATTCATGACTAAGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661445 13 + 115148730 CATTCG----TAAGTGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892330 17 + 189454096 CATTCATGAGTAAGTGT i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580537 17 - 190850796 CATTGATGACTAGGTGC i calJac3.chr3 T 74 C 0 s canFam3.chr16 16892854 17 - 59632846 catacataaataagtga i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 956040 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=32748.000000 s hg38.chr4_KI270789v1_alt 64117 13 + 205944 GATGCACTGGGAG s panTro5.chr4 192855770 13 + 194502333 GATGCACTGGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739493 13 + 195804263 GATGCACTGGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776054 13 + 4876863 GATGCACTGGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661458 13 + 115148730 GATGCACTGGGGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892347 13 + 189454096 GATGCACTGGGAG i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580554 13 - 190850796 GACGTACTGGGAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 956071 13 - 2196201 GATGTACTGGGAA i cebCap1.NW_016107886v1 I 31 C 0 s canFam3.chr16 16892871 13 - 59632846 tgtgaactagaaa i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352343 36 - 5030052 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I e otoGar3.GL873580 11197450 0 - 11315646 C a score=54233.000000 s hg38.chr4_KI270789v1_alt 64130 15 + 205944 ATGATTGGGAGTCCG--- s panTro5.chr4 192855783 15 + 194502333 ATGATTGGGAGTCCG--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739506 15 + 195804263 ATGATTGGGAGTCCG--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776067 15 + 4876863 ATGATTGGGAGTCTG--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661471 15 + 115148730 ATGATTGGGAGTACG--- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892360 14 + 189454096 ATGACTGGGAGTCT---- i macFas5.chr5 C 0 C 0 s calJac3.chr3 189580567 15 - 190850796 ATGACTGGGGGTCCG--- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 956084 15 - 2196201 ATGACTGGGAGTCCG--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352379 15 - 5030052 ATGACTGGGAGTCCG--- i aotNan1.NW_018492112v1 I 36 C 0 s otoGar3.GL873580 11197450 15 - 11315646 ATGATTGGAAGTCCA--- i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16892884 18 - 59632846 atgattgggaattcactg i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e colAng1.NW_012116221v1 828513 0 + 2368649 C e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I a score=17889.000000 s hg38.chr4_KI270789v1_alt 64145 13 + 205944 TATGGGAT-GGCGT s panTro5.chr4 192855798 13 + 194502333 TATGGGAT-AGCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739521 13 + 195804263 TATGGGAT-AGCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776082 14 + 4876863 TAGGGAGTGGGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661486 13 + 115148730 TATGGGAT-GGCGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187892374 13 + 189454096 CATGGGAG-GGTGT i macFas5.chr5 C 0 I 2 s colAng1.NW_012116221v1 828513 12 + 2368649 TAT-GGAG-TGTGT i colAng1.NW_012116221v1 C 0 I 2 s calJac3.chr3 189580582 13 - 190850796 GATGGGAG-TGGGC i calJac3.chr3 C 0 I 2 s cebCap1.NW_016107886v1 956099 13 - 2196201 GATGCGAG-TGGGC i cebCap1.NW_016107886v1 C 0 I 2 s aotNan1.NW_018492112v1 3352394 13 - 5030052 GATGGGAG-TGGGC i aotNan1.NW_018492112v1 C 0 I 2 s otoGar3.GL873580 11197467 13 - 11315646 CATGAGGG-TGCTT i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16892902 13 - 59632846 tatgagtg-cactt i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I e manLeu1.NW_012102221v1 2706587 16 - 2847728 I e chlSab2.chr7 134268759 0 + 135778131 C e cerAty1.NW_012001672v1 3309648 0 + 4669795 C e macNem1.NW_012013133v1 24270408 0 - 25927173 C e rheMac8.chr5 188944973 16 + 190429646 I a score=8725.000000 s hg38.chr4_KI270789v1_alt 64158 1 + 205944 A s panTro5.chr4 192855811 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739534 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776096 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661499 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944989 1 + 190429646 A i rheMac8.chr5 I 16 C 0 s macFas5.chr5 187892389 1 + 189454096 A i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24270408 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309648 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268759 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706603 1 - 2847728 A i manLeu1.NW_012102221v1 I 16 C 0 s colAng1.NW_012116221v1 828527 1 + 2368649 A i colAng1.NW_012116221v1 I 2 C 0 s calJac3.chr3 189580597 1 - 190850796 A i calJac3.chr3 I 2 C 0 s cebCap1.NW_016107886v1 956114 1 - 2196201 A i cebCap1.NW_016107886v1 I 2 C 0 s aotNan1.NW_018492112v1 3352409 1 - 5030052 A i aotNan1.NW_018492112v1 I 2 C 0 s otoGar3.GL873580 11197480 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16892915 1 - 59632846 g i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064482 2 - 14256875 I a score=723780.000000 s hg38.chr4_KI270789v1_alt 64159 69 + 205944 TTGGCCAGTGGTCCCCTTAACAGAGCGGACCT------TTGTTGTTGGGCATCACCTGACCCCAGTGTCTAAAGG s panTro5.chr4 192855812 69 + 194502333 TTGGCCAGTGGTCCCCTTAACAGAGCGGACCT------TTGTTGTTGGGCATCACCTGACCCCAGTGTCTAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739535 69 + 195804263 TTGGCCAGTGGTCCCCTTAACAGAGCGGACCT------TTGTTGTTGGGCATCACCTGACCCCAGTGTCTAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776097 69 + 4876863 TTGGCCAGTGGTCCCCTTAACAGAGCGGGCCT------TTGTTGTTGGGCATCACCTGACCCCAGTGTCTAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661500 69 + 115148730 TTGGCCAGTGGTCCCCTTAACAGAGCGGGCCT------TTGTTGTTGGGCATCACCTGACTCCAGTGTCTAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188944990 69 + 190429646 TTGGCCAATGGTCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGTCATCACCTGACTCCAGCGTCTAAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892390 69 + 189454096 TTGGCCAATGGTCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGTCATCACCTGACTCCAGCGTCTAAAGG i macFas5.chr5 C 0 M 326 s macNem1.NW_012013133v1 24270409 69 - 25927173 TTGGCCAGTGGTCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGTCATCACCTGAGGTCAGCGTCTAAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309649 69 + 4669795 TTGGCCAGTGGTCCCCTTAACAGAGTGGGCCT------TTGTGGTTGGTCATCACCTGACTCCAGCGTCTAAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268760 69 + 135778131 TTGGCCAGTGGTCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGTCATCACCTGACTCCAGCGTCTCAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706604 69 - 2847728 TTGGCCAGTGGCCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGTCATCACCTGACTCCAGCGTCTAAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828528 69 + 2368649 TTGGCCAGTGGTCCCCTTAACAGAGTGGGCCT------TTGTTGTTGGGCATCACCTGACTCCAGCATCTAAAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580598 69 - 190850796 CTGGCCAGTGGTCTCCTTGACAGAGTGGTCCT------TTTTAGTCCGACGTCACCTGACTCCAGTGTCTAAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064484 68 - 14256875 TTGGCCAGTGGTCTCCTTAACAGAGTGGTCCT------TTTT-GTCTGGCATCACCGGACTCCAGTGTCTAAAGG i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 956115 68 - 2196201 CTGGCCAGTGGTCTCCTTAACAGAGGGGTCCT------TTTT-GTCCGGCCTCACCTGACTCCAGCGTCTAAAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352410 69 - 5030052 CTGGCCAGTGGTCTCCTTAACAGAGTGGCCCT------TTTTTGTCCGGCATCACCTGACTCCAGTGTCTAAAGG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197481 66 - 11315646 CTGGCAGGGGATGCC--TGGTGGAGTGGCCCT------CTGCTGTCAGGCCTCTGCAG-CCCCAGAGTCCAGAGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16892916 75 - 59632846 ttggcaagtggattccttagtaaaataatccttttttgttgttgttgggtatcactgaactccagtgtctagagt i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I a score=505256.000000 s hg38.chr4_KI270789v1_alt 64228 59 + 205944 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGC--CACGGGAACGGT s panTro5.chr4 192855881 59 + 194502333 AGAATTTCCTCCTTGGAGAT--AAGGTCTGACCGCAGCCTTCTGGGAGC--CACGGGAACGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739604 59 + 195804263 AGAATTTCCTCCTTGGAGAT--AAGGTCTGACCGCAGCCTTCTGGGAGC--CACGGGAATGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776166 59 + 4876863 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGC--CACGGGAACGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661569 59 + 115148730 AGAATTTCCTCCTTGGAGAT--AACATCTGACCGCAGCCTTCTGGGAGC--CACGGGAACGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945059 59 + 190429646 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGT--CACAGAAACGGT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270478 59 - 25927173 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGT--CACAGAAACGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309718 59 + 4669795 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGT--CACAGAAACGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268829 59 + 135778131 AGAATTTCCTCCTTGGAGAT--AACATCTGACCACAGCCTTCTGGGAGT--CACAGAAACGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706673 59 - 2847728 AGAATTTCCTCCTTGGAGGT--AACGTCTGACCGCAGCCTTCTGGGAGT--CACAGAAATGGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828597 59 + 2368649 AGAATTTCCTCCTTGGAGAT--AACGTCTGACCGCAGCCTTCTGGGAGT--CACAGAAACAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580667 58 - 190850796 AGAATCTCCTCCTGGGCGAT--AACGTCTGAATGCAGGCTTCTGGG-GC--CACAGGGACAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064552 51 - 14256875 AGAATCTCCTCCTTGGCGAT--AACATCTGAATGTAGCCTTCTGG----------GGAACAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956183 58 - 2196201 AGAATCTCCTCCTTGGCAAT--AACGTCTGAACATAGCCTTCTGGG-GC--CACAGGGACAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352479 58 - 5030052 AGAACCTCCTCCTTGGCGAT--AACGTCTGAAGGCAGACTTCTGGG-GC--CACAGGAACAGT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197547 61 - 11315646 AGCACGTCCTCTTAAGAGGTCACACATCTTACGGCAGTCTTCTGGAAGC--AGGCCAAAGGGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16892991 61 - 59632846 agaacctcctctttggggtt--tatgtctgactgaagccctctgaaagcagagcaggaagggg i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402151 195 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e macFas5.chr5 187892459 326 + 189454096 M a score=1296878.000000 s hg38.chr4_KI270789v1_alt 64287 167 + 205944 CTTGTGTGCCTGCAATTAGAACACACGTAATCACTTTATTTCTGAATTTAAGC-------CTCACCCAGTC-----CCCCATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCTAGCTAGGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTGTTTTCTT------------------------CGTAGGTTGTGGC-TTTCT-------------TTATTGTA s panTro5.chr4 192855940 167 + 194502333 CTTGTGTGCCTGCAATTAGAACACATGTAATCACTTTATTTCTGAATTTAAGC-------CTCACCCAGTC-----CCCCATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCTAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTATTTTCTT------------------------CTTAGGTTGTAGC-TCTCT-------------TTATTGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739663 167 + 195804263 CTTGTGTGCCTGCAATTAGAACACATGTAATCACTTTATTTCTGAATTTAAGC-------CTCACCCAGTC-----CCCCATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCTAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTATTTTCTT------------------------CTTAGGTTGTAGC-TCTCT-------------TTATTGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776225 165 + 4876863 CTTGTGTGCCTGCAATTAGAACACATGTAATCACTTTATTTCTGAATTTAAGC-------CTCACCCAG-------CCCCATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCTAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTATTTTCTT------------------------CTTAGGTTGTAGC-TTTCT-------------TTATTGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661628 167 + 115148730 CTTGTGTGCCTGCAATTAGAACGCATGTAATCACTTTATTTCTGAAtttaagc-------ctcacccagtc-----ccccacggttgc----------------------------ttatttgc----t----------------gact-cctagctgtgaaactttctgagat-tctctg-----agtgaatcacatttcttttctt------------------------cttaggttgcagc-tttct-------------ttattcta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945118 168 + 190429646 CTTGTGTCCCTGCAATTAGAATGCATGTAATCACTTTATTTCTGAATTTTAGC-------CTCACCGAGTC-----CCCCACGGTTGC----------------------------TTCTTTGC----T----------------GACT-CCAAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTAGGTTTCAGCTTTTCT-------------TTATTCTA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270537 168 - 25927173 CTTGTGTCCCTGCAATTAGAATGCATGTAATCACTTTATTTCCGAATTTTAGC-------CTCACCGAGTC-----CCCCATGGTTGC----------------------------TTCTTTGC----T----------------GACT-CCAAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTAGGTTTCAGCTTTTCT-------------TTATTCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309777 168 + 4669795 CTTGTGTCCCTGCAATTAGAATGCATGTAATCACTTTATTTCTGAATTTTAGC-------CTCACCGAGTC-----CCCCATGGTTGC----------------------------TTCTTTGC----T----------------GACT-CCAAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTAGGTTTCAGCTTTTCT-------------TTATTCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134268888 167 + 135778131 CTTGTGTCCCTGC-ATTAGAATGCATGTAATCACTTTATTTCTGAATTTTAGC-------CTCACTGAGTC-----CCCCATGGTTGC----------------------------TTCTTTGC----T----------------GACT-CCAAGCTATGGAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CCTAGGTTTCAGCTTTTCT-------------TTATTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706732 168 - 2847728 CTTGTGTCCCTGCAATTAGAATGCATGTAATCGCTTTATTTCCTAATTTTAGC-------CTCACCGAGTC-----CCCCATGGTTGC----------------------------TGCTTTGC----T----------------GACT-CCAAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTAGGTTTCAGCTTTTCT-------------TTATTCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828656 168 + 2368649 CTTGTGTCCCTGCAATTAGAATGCACATAATCACGTTATTTCTGAATTGTAGC-------CTCACCGAGTC-----CCCCGTGGTTGC----------------------------TTCTTTGC----T----------------GACT-CCAAGCTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTAGGTTTCACCTTTTCT-------------TTATTCTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580725 157 - 190850796 CGTGTGTTCCGTGAACTACAATGCGTGTTATCACTTCACT-----------------TGTCTCACCCAACC-----CACCATGGTTGC----------------------------TTATTTGC----T----------------AACT-CCAAGGTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTACATTGCAGC-TTCCT-------------TTATTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064603 174 - 14256875 CTTGTGTTCCGTGAATTAGAATGCATGTTATCACTTCATTTCTGAAttttagcctcatgtctcactcaatg-----caccaaggttgc----------------------------ttatttgc----t----------------gact-ccaaggtataaaactttctcagat-tctctg-----agtgaatcacatttcttttctt------------------------cttacattgcagc-ttcct-------------tttttcta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956241 174 - 2196201 CTTGTGTTCTGTGAATTAGAATGCATGTTATCACTTCATTTCTGAATTTTAGCCTCATGTCTCACCCAATC-----CACGATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCAAGGTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTTCTT------------------------CTTACCTTGCAGC-TTCCT-------------TTATTCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352537 158 - 5030052 CTTGTGTTCCGTGAATTAGAA----------------ATTTCTGAATTTTAGCCTCATGTCTCACCCAATC-----CACCATGGTTGC----------------------------TTATTTGC----T----------------GACT-CCAAGGTATGAAACTTTCTGAGAT-TCTCTG-----AGTGAATCACATTTCTTTACTT------------------------CTTACATTGCAGC-TTCCT-------------TTATTCTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197608 241 - 11315646 CTTGTGTCCCACCATTTAGAATATGTGTTTTCATTTAATCTCTCAATTTTAGCCTCACACCTCACCCAGTC-----CACCGTAGCTTCTAGGGATCTGATGGGGGCCTCCTGTGTTTTATTTCT----TCAGAGATGGAGCCCTGGACC-TCCTGCCTGGAGACTCAGTGTGACGTCTCTGCATACAGCCAACCCCAGACCACCACATGA---------------------CTCCAGGTATGAGACTTTTTGAGATCTTCAAAGTTGATCCA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893052 199 - 59632846 cttaagttccattattcaaaatatctattatcactaaatttctcaattttagcctcatatctcacccaatc-----caccaaggcccc----------------------------tggtgttc----t----------------gattgggtggcttctttttttttttaatt-tttctt-----taaagattttatttattcatgagagacacagagagagatgcagagacataggcagaggt-tctcc-------------ctgatgca i canFam3.chr16 C 0 I 429 s dasNov3.JH570353 1402346 186 - 2520184 tctgagtgcctggaaatctga-gtgtgcaactgctctgcctctaggttttgaacta----atctcccagttttcagctttataccttc----------------------------tgatctaccatat----------------gact-cagagttatcaaactttctgagct-tctctg---agagagaatcgtatatcttctcttttagca------------------cttaaatttcaat-tttcc-------------ttattcca i dasNov3.JH570353 I 195 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e macFas5.chr5 187892459 326 + 189454096 M a score=405842.000000 s hg38.chr4_KI270789v1_alt 64454 43 + 205944 CTAAATCAATGCCTACTAGTCTGTTAAATGTC-----------AAAGAAATATT s panTro5.chr4 192856107 43 + 194502333 CTAAATCAATGCCTAGTAGTCTGTTAAATGTC-----------AAAGAAATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739830 43 + 195804263 CTAAATCAATGCCTACTAGTCTGTTAAATGTC-----------AAAGAAATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776390 43 + 4876863 CTAAATCAACGCCTACTAGTCTGTTAAATGTC-----------AAAGAAATATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661795 43 + 115148730 ctcaatcaatgcctactagtctgttaaatgtc-----------aaagaaatatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945286 43 + 190429646 CTAAACCAATACCTACTAGTCTGTTAAATGTC-----------AAAGAAATATT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270705 43 - 25927173 CTAAACCAATACCTACTAGTCTGTTAAATGTC-----------AAAGAAATATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309945 43 + 4669795 CTAAACCAATACCTACTAGTCTGTTAAACGTC-----------AAAGAAATATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269055 43 + 135778131 CTAAATCAATACCTACTAGTCTGTTAAACATC-----------AAAGAAATATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706900 43 - 2847728 CTAAACCAATACCTACTAGTCTGTTAAACATC-----------AAAGAAATGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828824 43 + 2368649 CTAAATCAATACCTACTAGTCTGTTAAACATC-----------AAAGAAATATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580882 43 - 190850796 CTATATTAATGCCCACCAGTCTGTTAAATTTC-----------AAAGAAATGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064777 43 - 14256875 ctaaattaatgcccaccagtcagttaaatttc-----------aaagaaaagtt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956415 43 - 2196201 CTAAATTAATGCCCACCAGTCTGTTAAATTTC-----------AAAGAAATATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352695 43 - 5030052 CTAAATTAATGCCCACCAGTCTGTTAAATTTC-----------AAAGAAATGTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197849 43 - 11315646 CTAAATCAATTACTACTCATGTGGTGAACTTC-----------AAAGAAATGTT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1402532 53 - 2520184 ctaaatcagttaccactag-ctatcaaatttcccatttccaaaaaaaaaatgtt i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e macFas5.chr5 187892459 326 + 189454096 M a score=500507.000000 s hg38.chr4_KI270789v1_alt 64497 51 + 205944 AAACTTTTTATATTCTAATACTACT---CCCATTC-TTTTGTCCTAGTGGGCTTA s panTro5.chr4 192856150 54 + 194502333 AAACTTTTTATCTTCTAATATTACTTCTCCCATTC-TTTTGTCCTAGTGGGCTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739873 54 + 195804263 AAACTTTTTATCTTCTAATATTACTTCTCCCATTC-TTTTGTCCTAGTGGGCTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776433 54 + 4876863 AAACTTTTTATCTTCTAATATTACTTCTCCCATTC-TTTTGTCCTAGTGGGCTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661838 54 + 115148730 aaactttttatcttctaatattacttctcccattc-ttttgtcctagtgggctca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945329 54 + 190429646 AAATTTTATATCTTCTAATACTACTTCTTCCATTC-TTTTGTCCCAGTAGGCTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892785 54 + 189454096 AAATTTTATATCTTCTAATACTACTACTTCCATTC-TTTTGTCCCAGTAGGCTTA i macFas5.chr5 M 326 C 0 s macNem1.NW_012013133v1 24270748 54 - 25927173 AAATTTTATATCTTCTAATACTACTTCTCCCATTC-TTTTGTCCCAGTAGGCTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3309988 54 + 4669795 AAATTTTATATCTTCTAATACTACTTCTCCCATTC-TTTTGTCCCAGTAGGCTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269098 54 + 135778131 AAATTTTATATCTTCTAATACTACTTCTCCCATTA-TTTTGTCCCAGTAGGCTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706943 54 - 2847728 AAATTTTATGTCTTCGAATACTACTGCTCCCATTC-TTTTGTCCCAGTAGGCTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828867 54 + 2368649 AAATTTTATATCTCCTAATACTACTACTCCCATTC-TTTTGTCCCAGTAGGCTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580925 52 - 190850796 AAATTTTTAA---TCTAATATTACTTCTCCTGCTCTTTTTGCCCCAGTGGGCTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064820 55 - 14256875 aaacttttaatcttctaatattacttctcccattctttttgtcccagtgggctta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956458 55 - 2196201 CAACGTTTAATCTTCTAATATTACTTCTCCCATTCTTTTTGTCCCAGTGGGCTTA i cebCap1.NW_016107886v1 C 0 I 31 s aotNan1.NW_018492112v1 3352738 55 - 5030052 AAACTTTTAATTTTCTAATATTACTTCTCTCATTCTTTTTGTCCCAGAGGGCTTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197892 38 - 11315646 CCCGGTCTTGTCTGCTAATATCACTCCTC-----------------ATGGGCTCA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1402585 55 - 2520184 caacttcttatctgctactatcacctctcctattctttttgtccttacagactta i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I a score=132338.000000 s hg38.chr4_KI270789v1_alt 64548 20 + 205944 AGGATGTTTTAATTTATTTT- s panTro5.chr4 192856204 20 + 194502333 AGGATGTTTTAATTTATTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739927 20 + 195804263 AGGATGTTTTAATTTATTTT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776487 20 + 4876863 AGGATGTTTTAATTTATTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661892 19 + 115148730 tggatgttttaattta-ttt- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945383 19 + 190429646 TGGATGTTTTAATTTA-TTT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892839 19 + 189454096 TGGATGTTTTAATTTA-TTT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270802 19 - 25927173 TGGATGTTTTAATTTA-TTT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310042 19 + 4669795 TGGATGTTTTAATTTA-TTT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269152 19 + 135778131 TGGATGTTTTAATTTA-TTT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2706997 19 - 2847728 TGGATGttttaattta-ttt- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828921 19 + 2368649 TGGATGTTTTAATTTA-TTT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580977 19 - 190850796 TGCAGGTTTAAATTAA-TTT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064875 19 - 14256875 tgcaggtttaaattaa-ttt- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3352793 19 - 5030052 TGCATGTTTTAATTTA-TTT- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197930 19 - 11315646 GACATAATTTAATTTC-TCC- i otoGar3.GL873580 C 0 I 9 s dasNov3.JH570353 1402640 18 - 2520184 --tttatctttaatta-tttt i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I a score=78555.000000 s hg38.chr4_KI270789v1_alt 64568 8 + 205944 GCTGTCCT s panTro5.chr4 192856224 8 + 194502333 GCTGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739947 8 + 195804263 GCTGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776507 8 + 4876863 GCTGTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661911 8 + 115148730 gctctcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945402 8 + 190429646 GCTCtcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892858 8 + 189454096 GCTCTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270821 8 - 25927173 GCTCtcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310061 8 + 4669795 GCTCTCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269171 8 + 135778131 GCTCTCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707016 8 - 2847728 gctctcct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828940 8 + 2368649 GCTCTCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189580996 8 - 190850796 GCTCTCCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064894 8 - 14256875 gccctcct i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3352812 8 - 5030052 GCTGTCCT i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1402658 8 - 2520184 gctctcct i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e otoGar3.GL873580 11197949 9 - 11315646 I a score=110288.000000 s hg38.chr4_KI270789v1_alt 64576 15 + 205944 CGTAGTTGAttttct s panTro5.chr4 192856232 15 + 194502333 CTTAGTTGAttttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739955 15 + 195804263 CTTAGTTGAttttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776515 15 + 4876863 CTTAGTTGAttttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661919 15 + 115148730 cttagttgattttcT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945410 15 + 190429646 cttcgttgattttct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187892866 15 + 189454096 CTTAGTTGGTtttct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24270829 15 - 25927173 cttcgttgattttct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310069 15 + 4669795 CTTAGTTGATtttct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269179 15 + 135778131 CTTAGTTGATTTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707024 15 - 2847728 cttcgttgattttct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 828948 15 + 2368649 CTTAGCTGATtttct i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13064902 15 - 14256875 cttagttgattttct i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1402666 15 - 2520184 tttacttgattttct i dasNov3.JH570353 C 0 I 35 e calJac3.chr3 189581004 0 - 190850796 C e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352820 0 - 5030052 C e otoGar3.GL873580 11197949 9 - 11315646 I a score=62880.000000 s hg38.chr4_KI270789v1_alt 64591 18 + 205944 ttc--------------------------------------ttc-------------------tttctttttttt s panTro5.chr4 192856247 18 + 194502333 ttc--------------------------------------ttc-------------------tttctttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739970 18 + 195804263 ttc--------------------------------------ttc-------------------tttctttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776530 30 + 4876863 ttc--------------------------------------ttct-------ttttttttttttttttttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661934 37 + 115148730 TTC--------------------------------------TTCTTTCtttctttcttttttttttttttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945425 18 + 190429646 ttc--------------------------------------ttt-------------------cttctttctttt i rheMac8.chr5 C 0 I 38 s macFas5.chr5 187892881 18 + 189454096 ttc--------------------------------------ttt-------------------cttctttctttt i macFas5.chr5 C 0 I 36 s macNem1.NW_012013133v1 24270844 18 - 25927173 ttc--------------------------------------ttt-------------------cttctttctttt i macNem1.NW_012013133v1 C 0 I 42 s cerAty1.NW_012001672v1 3310084 18 + 4669795 ttc--------------------------------------ttt-------------------cttctttctttt i cerAty1.NW_012001672v1 C 0 I 33 s chlSab2.chr7 134269194 18 + 135778131 TTC--------------------------------------TTT-------------------Cttctttctttt i chlSab2.chr7 C 0 I 84 s manLeu1.NW_012102221v1 2707039 18 - 2847728 ttc--------------------------------------ttt-------------------cttctttctttt i manLeu1.NW_012102221v1 C 0 I 614 s colAng1.NW_012116221v1 828963 18 + 2368649 ttc--------------------------------------ttc-------------------tttctttttttc i colAng1.NW_012116221v1 C 0 I 27 s dasNov3.JH570353 1402716 56 - 2520184 ttcaaattactgcatttaaccagaaCTTTAATAAGGGATAGTTT-------------------ATTTTAtttttt i dasNov3.JH570353 I 35 C 0 e calJac3.chr3 189581004 0 - 190850796 C e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352820 0 - 5030052 C e saiBol1.JH378165 13064917 0 - 14256875 C e otoGar3.GL873580 11197949 9 - 11315646 I a score=608282.000000 s hg38.chr4_KI270789v1_alt 64609 147 + 205944 ttgagacagagtcttg------------ctctgtcccccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcccgcctcagcc-tcctgagcag--ctgggactacaggcacccgccaccatgcctgg s panTro5.chr4 192856265 147 + 194502333 ttgagacagagtcttg------------ctctgtcccccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcccgcctcagcc-tcctgagcag--ctgggattacaggcacccgccaccatgcctgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192739988 147 + 195804263 ttgagacagagtcttg------------ctctgtcccccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcccgcctcagcc-tcctgagcag--ctgggattacaggcacccgccaccatgcctgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776560 147 + 4876863 ttgagacagagtcttg------------ctctgtcccccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctcctgggttcaagtgattctcccgccttagcc-tcctgagcag--ctgggattacaggcacccgccaccatgcctgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112661971 145 + 115148730 ttgagacacagtcttg------------ctctgt--cccaggctggagtgcaatggtgtgatttcagctcactgcaacctccacctcccgtgttcaagtgattctcctgcctcagcc-tcctgagcag--ctgggattacaggcacccgccaccatgcctgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945481 147 + 190429646 ttgagacagagtcttg------------ctctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcc-tcctgagtgg--ctgggattataggcacccgccaccacgcctgg i rheMac8.chr5 I 38 C 0 s macFas5.chr5 187892935 147 + 189454096 ttgagacagagtcttg------------ctctgttgcccaggctggagtgcagtggcacgattttggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcc-tcctgagcgg--ctgggattataggcacccgccaccacgcctgg i macFas5.chr5 I 36 C 0 s macNem1.NW_012013133v1 24270904 147 - 25927173 ttgagacagagtcttg------------ctctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcc-tcctgagcgg--ctgggattataggcacccgccaccacgcctgg i macNem1.NW_012013133v1 I 42 C 0 s cerAty1.NW_012001672v1 3310135 118 + 4669795 ttgagacagagtcttg------------ctctgtt-cccaggctggagtgcagtcgcacgatctcggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcc-tcctgag------------------------------cgcctgg i cerAty1.NW_012001672v1 I 33 C 0 s chlSab2.chr7 134269296 139 + 135778131 ttgag-------nnnn------------nnnnnntgcccaggctggagtg-agtggcacgatctcggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcc-tcctgagtgg--ctgggattataggcacctgccaccacgcctgg i chlSab2.chr7 I 84 C 0 s colAng1.NW_012116221v1 829008 147 + 2368649 ttgagacagagtcttg------------ctctgttgcccaggctggagtgcagtggcatgatcttggctcactgcaacctccgcctcctgggtgcaagtgattctcctgcctcagcc-tcctgaatgg--ctgggattataggcgcccgccaccacacctgg i colAng1.NW_012116221v1 I 27 C 0 s dasNov3.JH570353 1402772 137 - 2520184 taaagatttatttttatttatttaattcccctccccccccggttg------------------tctgttttctgtg---tctttttgctgcgtcttgtttctttgtccgcttctgttgtcgtcagcggcacgggaagtgtgggc----ggcgccattcctgg i dasNov3.JH570353 C 0 I 202 e calJac3.chr3 189581004 0 - 190850796 C e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352820 0 - 5030052 C e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I e otoGar3.GL873580 11197949 9 - 11315646 I a score=632959.000000 s hg38.chr4_KI270789v1_alt 64756 136 + 205944 ctaatttttgtatttttagtagagacggggtttcaccatcttggccgggctggtctcgaactcctgacctcaggtgatctgtccgcctcggcctcccaaagtgttgggattacaggcgtgagccaccacgcccggc s panTro5.chr4 192856412 136 + 194502333 ctaatttttgtatttttagtagagacggggtttcaccatcttggctggcctggtctcgaactcctgacctcaggtgatctgtctgccttggcctcccaaaatgttgggattacaggcgtgagccaccacgcctggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740135 136 + 195804263 ctaatttttgtatttttagtagagacggggtttcaccatcttggctggcctggtctcgaactcctgacctcaggtgatctgtctgccttggcctcccaaaatgttgggattacaggcgtgagccaccacgcctggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776707 136 + 4876863 ctaatttttgtatttttagtagagacggggtttcaccatcttggccagcctggtctcgaactcctgacctcaggtgatctgtctgcctcggcctcccaaagtgttgagattacaggcgtgagccaccacgcctggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662116 136 + 115148730 ctaatttttgtatttttagtagagacagggtttcaccatcttggccgggctggtctcgaactcctgacctcaggtgatctgtctgcctcggcctcccaaagtgttgggattacaggcgtgagccaccacgcccggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945628 136 + 190429646 ctaatttttgtatttttattagagatggggtttcaccatcttgaccaggctgctctcgaactcctgacctcaggagatctgccctccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcctggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893082 136 + 189454096 ctaatttttgtatttttattagagatggggtttcaccatcttgaccaggctgctcttgaactcctgacctcaggagatctgccctccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcctggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271051 136 - 25927173 ctaatttttgtatttttattagagatggggtttcaccatcttgaccaggctgctctcgaactcctgacctcaggagatctgccctccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcctggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310253 136 + 4669795 ctaatttttgtatttttattagagatggggtttcaccatcttgaccaggctgctctcgaactcctgacctcaggagatctgccctccttggcctcccaaagtgctgggattacaggtgtgagccaccacgcctggc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269435 136 + 135778131 ctaatttttgtatttttattagagatggggtttcatcatcttgaccaggctgctctcgaattcctgacctcaggagatctgccctccttggcctcccaaagttctgggattacaggtgtgagccaccatgcctggc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829155 136 + 2368649 ctaatttttatatttttagtagagatggggtttcaccatcttgaccaggctgctctcaaactcctgacctcaggagatctgccctccttagcctcccaaagtgctgggattacaggtgtgagccaccacgactggc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189581004 0 - 190850796 C e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352820 0 - 5030052 C e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I e otoGar3.GL873580 11197949 9 - 11315646 I a score=7800.000000 s hg38.chr4_KI270789v1_alt 64892 1 + 205944 c s panTro5.chr4 192856548 1 + 194502333 c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740271 1 + 195804263 c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776843 1 + 4876863 c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662252 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945764 1 + 190429646 c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893218 1 + 189454096 c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271187 1 - 25927173 c i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310389 1 + 4669795 c i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269571 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829291 1 + 2368649 c i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581004 1 - 190850796 C i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3352820 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I e otoGar3.GL873580 11197949 9 - 11315646 I a score=16562.000000 s hg38.chr4_KI270789v1_alt 64893 2 + 205944 TT s panTro5.chr4 192856549 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740272 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776844 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662253 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945765 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893219 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271188 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310390 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269572 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829292 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581005 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3352821 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197958 2 - 11315646 TT i otoGar3.GL873580 I 9 C 0 e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e canFam3.chr16 16893251 429 - 59632846 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 64895 1 + 205944 A s panTro5.chr4 192856551 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740274 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776846 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662255 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945767 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893221 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271190 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310392 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269574 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829294 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581007 1 - 190850796 A i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3352823 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197960 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893680 1 - 59632846 a i canFam3.chr16 I 429 C 0 e cebCap1.NW_016107886v1 956513 31 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=119683.000000 s hg38.chr4_KI270789v1_alt 64896 11 + 205944 GTTGATTTTCT s panTro5.chr4 192856552 11 + 194502333 GTTGATTTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740275 11 + 195804263 GTTGATTTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776847 11 + 4876863 GTTGATTTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662256 11 + 115148730 GTTGATTTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945768 11 + 190429646 GTTGATTTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893222 11 + 189454096 GTTGATTTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271191 11 - 25927173 GTTGATTTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310393 11 + 4669795 GTTGATTTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269575 11 + 135778131 GTTGATTTTCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829295 11 + 2368649 GTTGATTTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581008 11 - 190850796 GTTGATTTTCT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 956544 11 - 2196201 GTTGATTTTCT i cebCap1.NW_016107886v1 I 31 C 0 s aotNan1.NW_018492112v1 3352824 11 - 5030052 GTTGATTTTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197961 11 - 11315646 GTTGATTTTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893681 11 - 59632846 gttgattttct i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e saiBol1.JH378165 13064917 0 - 14256875 C e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=360411.000000 s hg38.chr4_KI270789v1_alt 64907 37 + 205944 TAAGGCAGAGCAGATAACATTTGTGCTTACACTACCA s panTro5.chr4 192856563 37 + 194502333 TAAGGCAGAGCAGATAACATTTGTGCTTACACTACCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740286 37 + 195804263 TAAGGCAGAGCAGATAACATTTGTGCTTACACTACCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776858 37 + 4876863 TAAGGCAGAGCAGATAACATTTGTGCTTACACTACCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662267 37 + 115148730 TAAGGCAGAGCAGATAACATTTGTGCTTACACTGCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945779 37 + 190429646 TAAGGGAAAGCAGATAACGTTTGTGCTTCTACTACCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893233 37 + 189454096 TAAGGGAGAGCAGATAACGTTTGTGCTTCTACTACCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271202 37 - 25927173 TAAGGGAGAACAGATAACGTTTGTGCTTCTACTACCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310404 37 + 4669795 TAAGGGAGAGCAGATAACGTTTGTGCTTCTACTACCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269586 34 + 135778131 TAAGGGAGAGCAGATAACGTTTGTGCTT---CTACCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829306 37 + 2368649 TAAGGGAGAGCAGATAACGTTTGTGCTTCTACTACCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581019 37 - 190850796 TAAGGGTGAGCAGATAACATTTGTGCTTACACTACCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064917 37 - 14256875 taagggtgagcagataacatttgtgcttacactacca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956555 37 - 2196201 TAAGAGTGAGCAGATAACATTTGTGCTTACACTACCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3352835 37 - 5030052 TAAGGGTGAGCAGATAACATTTGTGCTTACACTACCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11197972 37 - 11315646 GAAGGAAGAGCAGGTAGCATGTGTGTTCAAACTACCA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893692 37 - 59632846 tgagggagggcagataatatataaattcaaactacca i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1402909 202 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=603352.000000 s hg38.chr4_KI270789v1_alt 64944 58 + 205944 CATTTAACCAACAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATAAGAGTTTCC s panTro5.chr4 192856600 58 + 194502333 CATTTAACCAACAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATAAGAGTTTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740323 58 + 195804263 CATTTAACCAACAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATAAGAGTTTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776895 58 + 4876863 CATTTAACCAACAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATAAGAGTTTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662304 58 + 115148730 CATTTAACCAAAAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATAAGAGTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945816 58 + 190429646 CATTTAACCAAAAT-------TTCAATCGAGGATAGTTTAAATAAAACTTTATATCAGAGTTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893270 58 + 189454096 CATTTAACCAAAAT-------TTCAGTCAGGGATAGTTTAAATAAAACTTTATATCAGAGTTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271239 58 - 25927173 CATTTAACCAAAAT-------TTCAATCGAGGATAGTTTAAATAAAACTTTATATCAGAGTTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310441 58 + 4669795 CATTTAACCAAAAT-------TTCAATCGGGGATAGTTTAAATAAGACTTTATATCAGAGTTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269620 58 + 135778131 CATTTAACCAAAAT-------TTCAATCAGGGATAGTTTAAATAAAACTTTATATCAGAGTTTCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829343 58 + 2368649 CATTTAACCAAAAT-------TTCAATTGGGGATAGTTTAAATAAAACTTTATATCAGAGTTTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581056 58 - 190850796 CATTTAACCAAAAT-------TTTAATCAGGAATAGTTTTAAGaaaattttatataatagtttcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13064954 58 - 14256875 catttaaccaaaaT-------TTCGATCAGGGATAGTTTTAAGAAAATTTTTTATAATAGTTTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956592 58 - 2196201 CATTTAACCAAAAT-------TTCGATCAGGGATAGTTTTAAGAAAATTTTATATAATAGTTTCC i cebCap1.NW_016107886v1 C 0 I 33 s aotNan1.NW_018492112v1 3352872 58 - 5030052 CATTTAACCAAAAT-------TTCGATCAGGGACAGTTTTAAGAAAATTTTATATAATAGTTTCC i aotNan1.NW_018492112v1 C 0 I 35 s otoGar3.GL873580 11198009 58 - 11315646 CACCTAATCAAAAT-------TTTCATCAGGGATAGTTTATGGGAAACTTTGTGTAAGATTTTCC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893729 58 - 59632846 aatttaaccagaag-------tTTTAGCAGGGATAGTTCAAGGAAAATTTCATGTAAGATTTTTC i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1403111 65 - 2520184 cactgggccaaagtccgtttcccCAATAAGGGATAGTTTAAAGGAACCTTCATGTAAGATTTCCC i dasNov3.JH570353 I 202 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=241449.000000 s hg38.chr4_KI270789v1_alt 65002 72 + 205944 CATTTCCTCCATTCTCTTTCTAGAAGtt---------tttttt------ctttt-tt-tttt-------ttAGTATTGTTATTACTTGTAACTGTC s panTro5.chr4 192856658 74 + 194502333 CATTTCCTCCATTCTCTTTCTAGAAGtt---------tttttt-----tcttttctt-tttt-------ttAGTATTGTTATTACTTGTAACTGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740381 73 + 195804263 CATTTCCTCCATTCTCTTTCTAGAAGtt---------tttttt-----tctttc-tt-tttt-------ttAGTATTGTTATTACTTGTAACTGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3776953 72 + 4876863 CATTTCCTCCATTCTCTTTCTAGAAGTT---------TTTTTT------CTTTT-CT-TTTT-------TTAGTATTGTTATTACTTGTAACTGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662362 64 + 115148730 CATTTCCTCCATTCTCTTTCTAGAAGtt---------tttttt----------t-tt-tttt-------ttagtatttttattACTTGTAAC---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945874 76 + 190429646 CATTTCCTCCATTCTCTTTCTAGAAGtt------tttttgtttgtttgtttgtt-tt-------------tagtgtttttattACTTGAAACTGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893328 76 + 189454096 CATTTCCTCCATTCTCTTTCTAGAAgtt---------ttttttgt---tttgtt-ttgtttt-------ttagtgtttttattACTTGAAACTGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271297 81 - 25927173 CATTTCCTCCATTCTCTTTCTAGAAGTt------ttgttgtttgtttgtttgtt-tt-tttt-------ttagtgtttttattACTTGAAACTGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310499 73 + 4669795 CATTTCCTCCATTCTCTTTCTAGAAG-----------ttgttttt---tttttt-tt-tttA-------ATAGTGTTTTTATTACTTGAAACTGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269678 87 + 135778131 CGTTTCCTCCATTCTCTTTCTAGAAGtttttttttttttttttttttttttttt-tt-tttt-------ttAGTGTTTTTATTACTTGAAACTGTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829401 72 + 2368649 CATTTCCTCCATTTTCTTTCTAGAAGTT------------TGTGT---TTTGTG-TT-TTTT-------TTAGTGTTTTTATTACTTGAAACTGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581114 35 - 190850796 --------------------------------------------------------t-ttttaaaaaaattagtatatttattaCTTGTAAT---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065012 33 - 14256875 --------------------------------------------------------T-TTTT--TAAAATTAGTATATTTATTACTTGTAAT---- i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11198067 56 - 11315646 TGTTTCTTCCATTCTTTTTCTAGAAGCT----------------------------C-TTTA-------ACATTTTTTTTATTACTTGTAAC---- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893789 57 - 59632846 TTTTTCTTTCATTCTTTTTCTAGGAGTT---------------------------CT-TTCA-----------TATTTTTATTACTTATAATTTTT i canFam3.chr16 I 2 I 5 s dasNov3.JH570353 1403176 56 - 2520184 CTTGTCTTCCATTCTCTTCCTAGTAGCT---------------------------CT-TTAA-------TAA-----TTTATTATTTGTAACTTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 956650 33 - 2196201 I e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3352930 35 - 5030052 I e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=122830.000000 s hg38.chr4_KI270789v1_alt 65074 12 + 205944 TGTGTGAGTGCA-- s panTro5.chr4 192856732 12 + 194502333 TGTGTGAGTGCA-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740454 12 + 195804263 TGTGTGAGTGCA-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777025 12 + 4876863 TGTGTGAGTGCA-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662426 8 + 115148730 ----TGAGTGCA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945950 12 + 190429646 TGTGTGAGTGCA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893404 12 + 189454096 TATGTGAGTGCA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271378 12 - 25927173 TGTGTGAGTGCA-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310572 12 + 4669795 TGTGTGAGTGCA-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269765 12 + 135778131 TATGTGAGTGCA-- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 829473 12 + 2368649 TGTGTGAGTGCA-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581149 12 - 190850796 TGTGTGAGTGCA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065045 12 - 14256875 TGTGTGAGTGTA-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956683 12 - 2196201 TGTGTGAGTGCA-- i cebCap1.NW_016107886v1 I 33 C 0 s aotNan1.NW_018492112v1 3352965 12 - 5030052 TGTGTTAGTGCA-- i aotNan1.NW_018492112v1 I 35 C 0 s otoGar3.GL873580 11198123 12 - 11315646 TTTGTGTGTGTC-- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893851 12 - 59632846 TGTGTGTATGCA-- i canFam3.chr16 I 5 I 2 s dasNov3.JH570353 1403232 12 - 2520184 --TGTGTATGCATG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e manLeu1.NW_012102221v1 2707057 614 - 2847728 I a score=104187.000000 s hg38.chr4_KI270789v1_alt 65086 10 + 205944 -----GAGATATAAT s panTro5.chr4 192856744 10 + 194502333 -----GAGATATAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740466 10 + 195804263 -----GAGATATAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777037 10 + 4876863 -----GAGATATAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662434 10 + 115148730 -----GAGATATAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945962 10 + 190429646 -----GAGATATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893416 10 + 189454096 -----GAGATATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271390 10 - 25927173 -----GAGATATAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310584 10 + 4669795 -----GAGATATAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269777 10 + 135778131 -----GAGATATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707671 10 - 2847728 -----GAGATATAAT i manLeu1.NW_012102221v1 I 614 C 0 s colAng1.NW_012116221v1 829485 10 + 2368649 -----GAGATACAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581161 10 - 190850796 -----GAGATATCAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065057 10 - 14256875 -----GAGATATGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 956695 10 - 2196201 -----GAGATATAAT i cebCap1.NW_016107886v1 C 0 I 315 s aotNan1.NW_018492112v1 3352977 10 - 5030052 -----GAGATATAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198135 10 - 11315646 -----AAGATAAAGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893865 10 - 59632846 -----AAGATGGCAT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1403244 10 - 2520184 ACTCTGGAAT----- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=46683.000000 s hg38.chr4_KI270789v1_alt 65096 3 + 205944 ATT s panTro5.chr4 192856754 3 + 194502333 ATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740476 3 + 195804263 ATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777047 3 + 4876863 ATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662444 3 + 115148730 ATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945972 3 + 190429646 ATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893426 3 + 189454096 ATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271400 3 - 25927173 ATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310594 3 + 4669795 ATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269787 3 + 135778131 ATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707681 3 - 2847728 ATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829495 3 + 2368649 ATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581171 3 - 190850796 ATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065067 3 - 14256875 ATT i saiBol1.JH378165 C 0 I 305 s cebCap1.NW_016107886v1 957020 3 - 2196201 aTT i cebCap1.NW_016107886v1 I 315 C 0 s aotNan1.NW_018492112v1 3352987 3 - 5030052 ATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198145 3 - 11315646 ATT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893875 3 - 59632846 ATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403254 3 - 2520184 ATT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=41820.000000 s hg38.chr4_KI270789v1_alt 65099 6 + 205944 -AAAAT-T s panTro5.chr4 192856757 6 + 194502333 -AAAAT-T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740479 6 + 195804263 -AAAAT-T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777050 6 + 4876863 -AAAAT-T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662447 6 + 115148730 -AAAAT-T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945975 6 + 190429646 -AAAAT-T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893429 6 + 189454096 -AAAAT-T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271403 6 - 25927173 -AAAAT-T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310597 6 + 4669795 -AAAAT-T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269790 6 + 135778131 -AAAAT-T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707684 6 - 2847728 -AAAAT-T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829498 6 + 2368649 -AAAAT-T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581174 5 - 190850796 -AAAAT-- i calJac3.chr3 C 0 I 310 s saiBol1.JH378165 13065375 5 - 14256875 -aaaaG-- i saiBol1.JH378165 I 305 C 0 s cebCap1.NW_016107886v1 957023 5 - 2196201 -AAAAT-- i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3352990 6 - 5030052 -AAAATT- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198148 6 - 11315646 -AAAAT-T i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893878 6 - 59632846 -AAAAT-T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403257 6 - 2520184 AAAAGT-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=37589.000000 s hg38.chr4_KI270789v1_alt 65105 5 + 205944 -----------------TATCA------------------ s panTro5.chr4 192856763 5 + 194502333 -----------------TATCA------------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740485 5 + 195804263 -----------------TATCA------------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777056 5 + 4876863 -----------------TATCA------------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662453 5 + 115148730 -----------------TATCA------------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945981 5 + 190429646 -----------------TATCA------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893435 5 + 189454096 -----------------TATCA------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271409 5 - 25927173 -----------------TATCA------------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310603 5 + 4669795 -----------------TATCA------------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269796 5 + 135778131 -----------------TATCA------------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707690 5 - 2847728 -----------------TATCA------------------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829504 5 + 2368649 -----------------TATCA------------------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581489 5 - 190850796 -----------------TATCA------------------ i calJac3.chr3 I 310 C 0 s saiBol1.JH378165 13065380 5 - 14256875 -----------------TATCA------------------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957029 5 - 2196201 -----------------TATCA------------------ i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3352996 5 - 5030052 -----------------TATCA------------------ i aotNan1.NW_018492112v1 C 0 I 292 s otoGar3.GL873580 11198154 5 - 11315646 -----------------TGCCA------------------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893884 5 - 59632846 -----------------TTTCC------------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403263 40 - 2520184 TTCAGGGTAGTGATATGAATCAATTTTACTTAAATAGTCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=419107.000000 s hg38.chr4_KI270789v1_alt 65110 39 + 205944 AATTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGC s panTro5.chr4 192856768 39 + 194502333 AATTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740490 39 + 195804263 AATTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777061 39 + 4876863 AATTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662458 39 + 115148730 AATTTCAGGGTAGTGATATTAGTCATTTAT--TTTAGTAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188945986 39 + 190429646 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893440 39 + 189454096 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271414 39 - 25927173 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310608 39 + 4669795 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269801 39 + 135778131 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707695 39 - 2847728 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829509 39 + 2368649 AGTTTCAGGTTGGTGATATTAATCATTTAT--TTTAGCAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581494 39 - 190850796 AGTTTAAGGGTAGTGATATTAATCATTTAT--TTTAGTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065385 39 - 14256875 AGTTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957034 39 - 2196201 AGTTTCAGGGTAGTGATATTAATCATTTAT--TTTAGTAGT i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11198159 35 - 11315646 GATTTCAGGGTAGTTCTATTGA----TTAT--TTCAGCAGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893889 36 - 59632846 AGTTTCAGTTTC---ATATTGACCAATTGT--TTTAGTAGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403303 41 - 2520184 AATTTCAGGGTAGTGATATGGATCAATTATACTTAAATAGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e aotNan1.NW_018492112v1 3353001 292 - 5030052 I a score=978448.000000 s hg38.chr4_KI270789v1_alt 65149 84 + 205944 AAAATTAAATGTTAACATTCAACTG-----TAAGATTGGAAGATTT-AACT---GTCTTTTCCCCCATTGAATTAATACAGAACAAAAATTTA s panTro5.chr4 192856807 87 + 194502333 AAAATTAAATGTTAACATTCAACTG-----TAAGATTGGAAGATTT-AACTAATGCCTTTTCCCCCATTGAATTAATACAGAACAAAAATTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740529 87 + 195804263 AAAATTAAATGTTAACATTCAACTG-----TAAGATTGGAAGATTT-AACTAATGCCTTTTCCCCCATTGAATTAATACAGAACAAAAATTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777100 87 + 4876863 AAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AACTAATGCCTTTTCCCCCATTGAATTAATACAGAACAAAAATTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662497 87 + 115148730 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AATTAATGCCTTTTCCCCCATTGAATTAATACAGAACAAAAATTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946025 87 + 190429646 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACAAAAATTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893479 87 + 189454096 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACAAAAATTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271453 87 - 25927173 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACAAAAATTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310647 87 + 4669795 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACAAAAATTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269840 87 + 135778131 GAAATTAAATGTTAACATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACGAAAATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707734 87 - 2847728 GAAATTAAATGTTAGCATTCAACTG-----TAAGGTTGGAAGATTT-AGCTAATGCCTTCTCCCCCATTGAATTAATACAGAACAAAAATTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829548 88 + 2368649 GAAATTAAATGTTAAGATTCAACTG-----TAAGGTTGGAAGATTTAAGCTAATGCCTTCTGCCCCATTGAATGAATACAGAACAAAAATTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581533 86 - 190850796 GAAATT-AATGTTAACAATAAACTA-----TAAGGTTGGAAGATTT-AACTAATGCCTTTTCCCCCACTGAATTAATACAGAACTAAAATTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065424 87 - 14256875 GAAATTAAATGTTAACATTAAACTA-----TAAGGTTGGAAGATTT-AACTAATGCTTTTTCCCCCACTGAATTAATACTGAACTAAAGTTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957073 87 - 2196201 GAAATTAAATGTTAACATTAAACTA-----TAAGGTTGTAAGATTT-AACTAATGCCTTTTCCCCCACTGAATTAATACTGAACTAAAATTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3353293 87 - 5030052 aaaaTCAAATGTTAACATTAAACTA-----TAAGGTTGGAAGATTT-AACTAATGGCTTTTGCCCCACTGAATTAATACAGAACTAAAATTTA i aotNan1.NW_018492112v1 I 292 C 0 s otoGar3.GL873580 11198194 87 - 11315646 GACACTAAATGTTAACATTAAATTATAAATTAAGTTTGGAAGACTT-AAATCATAG-TTTTCCCCCCTTGAATTACTGCAAAACCAA----CA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16893925 85 - 59632846 CAAACCAAATGTTAACATTAAACTG-----TAAGTTTGGAGGATTT-AACCATTTTTTTTTTTTTA--TGAATCAATATAGAATTAACTTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403344 79 - 2520184 CAAACCAAATATTGACATT--GCTC-----TAAGTTTGGAAGATT--ATCTCATTATTATTCTC-----AAATCAATATGGGACTAACATTTA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=27846.000000 s hg38.chr4_KI270789v1_alt 65233 2 + 205944 TA s panTro5.chr4 192856894 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740616 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777187 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662584 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946112 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893566 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271540 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310734 2 + 4669795 TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269927 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707821 2 - 2847728 TA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829636 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581619 2 - 190850796 TA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065511 2 - 14256875 TA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957160 2 - 2196201 TA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3353380 2 - 5030052 TA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198281 2 - 11315646 TA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1403423 2 - 2520184 TA i dasNov3.JH570353 C 0 I 2 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e canFam3.chr16 16894010 0 - 59632846 C e mm10.chr8 86530868 500 - 129401213 I a score=63104.000000 s hg38.chr4_KI270789v1_alt 65235 5 + 205944 TTTCt s panTro5.chr4 192856896 5 + 194502333 TTTCt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740618 5 + 195804263 TTTCt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777189 5 + 4876863 TTTCt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662586 5 + 115148730 TTTCt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946114 5 + 190429646 TTTCt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893568 5 + 189454096 TTTCt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271542 5 - 25927173 TTTCt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310736 5 + 4669795 TTTCt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269929 5 + 135778131 TTTCt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707823 5 - 2847728 TTTCt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829638 5 + 2368649 TTTCt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581621 5 - 190850796 TTTCt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065513 5 - 14256875 TTTCt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957162 5 - 2196201 TTTCt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3353382 5 - 5030052 TTTCt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198283 5 - 11315646 TTTCT i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1403425 2 - 2520184 I e canFam3.chr16 16894010 0 - 59632846 C e mm10.chr8 86530868 500 - 129401213 I a score=7321204.000000 s hg38.chr4_KI270789v1_alt 65240 759 + 205944 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctgacaaaggctctgccttcaagcctggaagcccatggctctaagtggcaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatataaaccccaatccccaggctccagaagcaggcaa-ggaag-taacaaacagaagagtagaagaatagcagaatggtgtggcagagagaagagaaggaacatctgaacatcgagaggagttcagctagggatggttggagaggagattggctgctggatggccaaactccaggggaagatcatcttcccactccatccaccttccagctccccatccatcccactgaaagccacctccaccactcaataaaacccccgcattcatccttcaagtctgtgtgaaatctgattcttcctggattctggacaaggacctgggtactgagagggcactgagctggttaacacttaagccatctgcaaacagcaaagctaaaagagtgcactgtaacacacgtccacttgggctttgggagttgcaggcacccacccttagatgctaccatggggccagagcccaaaacacactcagcctggctcctgcac----ctgcctgtgtgc-ccccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacacccctgtcgcatgtcctgtgaggggggtcagggaactctaccgttt s panTro5.chr4 192856901 757 + 194502333 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctgacaaaggctctgccttcaagcctggaagcccacggctctaagtggcaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatataaaccccaatccccaggctccagaagcaggcga-ggaag-taacaaacagaagagtagaagaatagcagaatggtgtggcagagagaagagaaggaacatctgaacatcgagaggagttcagcaagggatggttggagaggagatcggctgctggatggccaaactccaggggaagatcatcttcccactccatccaccttccagctccccatccatcccactgaaagccacctccaccactcaataaaacccccgcattcatccttcaagtctgtgtacaatctgattcttcctggattctggacaaggacctgggtactgagagggcactgagctggttaacacttaagccatctgcaaacaacaaagctaa--gagtgcactgtaacacacgtccacttgggctttgggagtcgcaggcacccacccttagatgctaccatggggccagagcccaaaacacactcagcctggctcctgcac----ctgcctgtgtgc-ccccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacacccctgttgcatgtcctgtgaggggggtcagggaactctaccattt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192740623 757 + 195804263 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctgacaaaggctctgccttcaagcctggaagcccacggctctaagtggcaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatataaaccccaatccccaggctccagaagcaggcga-ggaag-taacaaacagaagagtagaagaatagcagaatggtgtggcagagagaagagaaggaacatctgaacatcgagaggagttcagcaagggatggttggagaggagatcggctgctggatggccaaactccaggggaagatcatcttcccactccatccaccttccagctccccatccatcccactgaaagccacctccaccactcaataaaacccccgcattcatccttcaagtctgtgtacaatctgattcttcctggattctggacaaggacctgggtactgagagggcactgagctggctaacacttaagccatctgcaaacaacaaagctaa--gagtgcactgtaacacacgtccacttgggctttgggagttgcaggcacccacccttagatgctaccatggggccagagcccaaaacacactcagcctggctcctgcac----ctgcctgtgtgc-ccccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacacccctgttgcatgtcctgtgaggggggtcagggaactctaccattt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777194 759 + 4876863 gatacagacaggagacggggaaatactgggtagaagattatggtgccctgacaaaggctctgccttcaagcctggaagcccacggccctaagtggcaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatataaaccccaatccccaggctccagaagcaggcga-ggaag-taacaaacagaagagtagaagaatagcagaatggtgtggcagagagaagagaaggaacatctgaacatcgagaggagttcagctagggatggttggagaggagatcggctgctggatggccaaactccaggggaagatcatcttcccactccatccaccttccagctccccatccatcccactgaaagccacctccaccactcaataaaacccccgcattcatccttcaagtctgtgtacaatctgattcttcccagatgctggacaaggacctgggtactgagagggcactgagctggttaatacttaagccatctgcaaacagcaaagctaaaagagtgcactgtaacacacgtccacttgggctttgggagctgcaggcacccacccttagatgctaccatggggccagagcccaaaacacactcagcctggctcctgcac----ctgcctgtgtgc-ccccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacacccctgttgcatgtcctgtgaggggggtcagggaactctaccgttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112662591 757 + 115148730 gatagagacaggagacagggaaatactgggtagaagacgatggtgccctagcaaaggcctcgccttcaagcctggaagcccacggccctaagtgggaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccgctatcctgtacccatataaaccccaatccccaggctccagaagcaggcga-ggaag-tgacgaacagaagagtagaagaatagcagaatagtgtggcagagagaagagaaggaacatctgaacatcgagaggagttcagctggggatggttggagaggagatcggctgctggatggccaaactccaggggaagatcatcttcccactccatcccccttccagctccccatccatcccactgagagccacctccaccactcagtaaaacccctgcattcatccttcaagtctgtgtacaacctgattcttcctggattctggacaaggacctgggtactgagagggcactgagctggttaacatttaagccatctgcaaacagcaaagctaaaagagtgaactgtaacacacgtccgcatgggctttgggagttgcaggcacccacccttagatgctactgtggggccggagcccaaaacacactcagcctggctcctgcac----ctgcctgtggg--ccccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacaccgctgttgcatgtcctgcga-gggggtcagggaactctgcagctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946119 757 + 190429646 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggtcccgccttcaagcctggaagcccacggccctaagtgggaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatgtaaaccccaatccccaggctccagaagcaggtga-ggaag-tgaccagcagaagagtagaagagcagcagaacagtgtggcagagagaagagaaggaacatctgaacattgagagtagttcagcttgggatggttggagacgagatcggctgctggacagccaaactctggggaaagat-atcttcctactccatcccccttccagctccccatccatcccactgagagccacctccaccactcagtaaaacccccgcattcatccttcaagtctgtgtacaacctgattcttcctggattctggacaaggacctgggtactgacaggacactgagctggttaacactgaagccgtctgcagacagcaaagctaaaagagtgcgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccggagcccaaaacacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcaggggcagaacatacgagccacacccctgtcgcatgtcctgtgaggggggtcagggaactctactgttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187893573 757 + 189454096 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaagcccacggccctaagtgggaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatgtaaaccccaatccccaggctccagaagcaggtga-ggaag-tgaccagcagaagagtagaagagcagcagaacagtgtggcagagagaagagaaggaacatctgaacattgagagtagttcagcttgggatggttggagacgagatcggctgctggacagccaaactctggggaaagat-atcttcctactccatcccccttccagctccccatccatcccactgagagccacctccaccactcagtaaaacccccgcattcatccttcaagtctgtgtacaacctgattcttccgggattctggacaaggacctgggtactgacaggacactgagctggttaacactgaagccgtctgcagacagcaaagctaaaagagtgcgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccggagcccaaaacacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcaggggcagaacatacgagccacacccctgtcgcatgtcctgtgaggggggtcagggaactctactgttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24271547 755 - 25927173 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaagcccacggccctaagtgggaacaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactattctgtacccatgtaaaccccaatccccaggctccagaagcaggtgagggaag-tgaccagcagaagagtagaagagcagcagaacagtgtggcagagagaagagaaggaacatctgaacattgagagtagtacagcttgggatggttggagacgagatcggctgctggacagccaaactctggggaaagat-atcttcctactccatcccccttccagctccccatccatcccactgagagccacctccaccactcagtaaaacccccgcattcatccttcaagtctgtgtacaacctgattcttccgggattctggacaaggacctgggtaccgacagggcactgagctggttaacactgaagccgtctgcagacagcaaagctaaaagagtgcgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccggagcccaaaacacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcaggggcagaacatacgagccacacccctgtcgcatgtcctgtgaggtgggtcagggaact---ctgttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3310741 755 + 4669795 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccttgccttcaagcctggaagcccacagccctaagtgggaagaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatgtaaaccccaatccccaggctccagaagcagttga-ggaag-tgaccagcagaagagtagaagagcagcagaacagtgtggcagagagaagagaaggaacatctgaacattgagagtagttcagcttgggatggttggagacgagatcggctgctggacagccaaactctggggaaagatcatcttcctactccatcccccttccagctccccatccatcccactgagagccacctccatcactcagtaaaacccctgcattcatccttcaagtctgtgtacaacctgattcttcctggattctggacaaggacctgggtactcacagggcactgagctggttaacactgaagccgtctgcagacagcaaagctaaaagagtgcgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccggagcccaaaacacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcagaggcagaacatacgagccacacccctgtcgcatgtcctgtgaggtgggtcagggaact---ctgttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134269934 754 + 135778131 gatacagacaggagacagggaaatgctgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaagcccacggccctaagtgggaacaggcattcctgttttcctgtccaaaagttgccttttcacctgccatgccccactatcctgtacccatgtaaatcccaatccccaggctccagaagcaggcga-ggaag-tgaccaacagaagagtagaagaacagccgaaccgtgtggcagagagaagagaaggaacatctgaacactgagagtagttcagcttgggatggttggagacaagatcagctgctgcacagccaaactctggggaaagatcatcttcccactccatcccccttccagctccccatccatctcactgagagccacctccaccactcagt-aaacccccgcattcatccttcaagtctgtgtacatcctgattcttcctggattctggacaaggacctgggtactgacagggcactgagctggttaacacttaagccgtctgcagacagcaaagctaaaagagtgtgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccagagcccaaatcacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcagtggcagaacataggagccacacccctgtcgcatgtcctgtgaggggggtcagggaact---ctGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2707828 755 - 2847728 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaagcccacggccctaagtgggaagaggcattcctgttttcctgcccaaaagttgccttttcacctgccatgccccactctcctgtacccatgtaaaccccaatccccaggctccagaagcaggtga-ggaag-tgaccagcagaagagtagaagagcagcagaacagtgtggcagagagaagagaaggaacatctgaatattgagagtagttcagcttgggatggttggagacgagatcggctgctggacagccaaactctggggaacgatcatcttcctactccatcccccttccagctccccatccatcccactgagagccacctccaccactcaataaaacccccgcattcatccttcaagtctgtgtacaacctgattcttcctggattctggacaaggacctgggtactgacaggacactgagctggttaacactgaagcggtctgcagacagcaaagctaaaagagtgcgctgtaacacacacccacttgggctttgggagttgtaagtacccacccttagatgctaccgtagggccggagcccaaaacacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcaggggcagaacatatgagccacacccctgtggcatgacctgtgaggtgagtcagggaact---ctgttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 829643 743 + 2368649 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaagcccatggccctaggtgggaacaggcactcctgttttcctgcccaaaagttgccttttcacctgccatgccccactatcctgtacccatgtaaaccccaatccccaggctccagaagcaggcga-ggaagttgaccatcagaagagtagaa---cagcagaacagtgtggcagagagaagagaaggagcatctgaacattgagagt-gttcagcttgggatggttggagacaagatcggctgctggacagccaaactctggggaaagatcatcttcccactccatcccccttccagctccccatccatcccactgagagccacctccaccactcagtaaaacccccacattcatccttcaagtctgtgtacaacctgattcttcctggattctggacaaggacctgggtactg------------gctggttaacacttaagccgtgtgcggacagcaaagctaaaagagtgcactgtagcacacacccacttgggctttgggagttgtaagtacccacccttagatgctactgtagggccggagcccaaaatacattcagcctggctcctgcac----ctgcgtgtgtgc-ccccctcccat-aggggtttgagtgtgcagtggcagaacataggagccacacccctgacgcatgtcctgtgaggggggtcggggaactccactgttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189581626 755 - 190850796 gatacagacaggagacaaggaaatactgggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaaacccacggacctaagtgggaacgggcactcctgttttcctgcccaaaagttgccttttcacctgccgtgccccactgtctcata-ccatataaaccccagaccccaggctccaaaagtggatga-ggaaa-tgac-----aaag---agaagaacagcagaatggcgtggcagagagaacagacggaacatttgaacattgagagaagtttggctggggatggttggagaggagatgggctgctggatggccaaactcaaggggaaggtcatcttcccactccatctcccttccagctttccacccatcccactgagagccacctccaccactcagtaaaacccccacattcatccttccagtccatgtacagcctgattgttcctggattctggacaaggacctggataccaagagggcattgagctggttaacacttaagctgtctgcagccagcaaaactaaaagagtgcactgtaacacacatccacctgggctttgggagttgcaggcacacacccttagacgctaccatggggctggagcccagaacacatgccccctggctcctgcacctgcctgcctgtgtgctccccctcccataaggggcttgagtgtgcagtggcagagcatatgagccatgaccctgtcgcacgtcctgcacagggggtcagggaactctcctgttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13065518 750 - 14256875 gatacagacaggagacagggaaatactaggtagaagatgatggtgccctggcaaaggccccgccttcaagcctggaaacccacagacctaagtgggaatggacactcctgttttcctgcccaaaagttgccttttcacctgccatgccccactgtctcata-ccatataaaccccagaccccaggctccagaagcagataa-ggaaa-tgac-----aaagagcagaagaacagcagaatggcatggcagagagaacagatggaacatttgaacattgagagaagtttggctgaggattgttggaga-------ggctgctggacggccaaactccaggggaagatcaccttccaacaccatctcccttccagctccccattcatcccactgagagccacctccaccactcagtaaagcccccacattcatccttccagtccgtgtacaacctgattgttcctggattctggacaaagacctgtgtaccaagagggcattgagctggttaacacttgagctgtttgcagacagcaaagctgaaagagtgcactgtaacacacttccgcttgggctttcggagttgcaggcacccacccttagatgctactgtggggctggagcccaaaacacacgcgccctggctcctgcacctgtctgcctgtgt-ctctccctcccataaggggtttgagtgtgcagtggcagaacatatgagccacaaccctgtcacatgtcctgcaaagggggtcagggaactctgctgctt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957167 758 - 2196201 gatacagacaggagacagggaaatactgggtagaagatgatggtgccctggcaaaggccccaccttcaagcctggaaacccacagacctaactgggaatgggcacttctgttttcctgcccaaaagttgccttttcacctgccatgccccactgtctcata-tcatgtaaaccccagaccccaggctctagaagcagataa-ggaaa-tgac-----gaacagcagaagaacagcagaatggcatggcagagagaacagatggagcatttgaacattgagaggagtttggctggggatggttggagaggagatgggctgctggatggctaaactccaggggaagatcagtttcccactccatctcccttccagctccccatccatcccactgagagccatctccaccactcagtaaaacccccacattcatctttccagtccgtgtacaacctgattgttcctggattctggacaaggacctgggtaccaagagggcactgagctggttaacacttaagctgtctgcagacagtaaaactaaaagagtgcactgtaacacacttccgcttgggctttgggagttgcaggcacccacccttagatgctactgtggggctggagcccaaaacacacgcgccctggctcctgcacctgcctgcctgtgtgctccccttcccataaggggtttgagtgtgcagtggcagaacatatgagccacaaccctgtcacatgtcctgcaaagggggccagggaactctactgttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3353387 758 - 5030052 gatacagacaggagacagggaaatactgggtggaagatgatggtgccctagcaaaggccccgccttcaagcctggaaacccacagacctaagtgggaacgggcactcctgttttcctgcccaaaagttgccttttcacctgccacgccccactatctcata-ccatataaaccccagatcccaggctccagaagcagatga-ggaaa-tgac-----aaagaacagaagaacagcagaatggcgtggcagagagaacagacggaacatttgaacattgagaggagtctggctggggatgattggagagtagatgggctgctggacggtgaaactccaggggaagatcaccttcccactccatcccctttccacctccccatccatcccactgagagccacctccaccactcagtaaaactcccacattcatccttccagtcagtgtacaacctgattgttcctggattctggacaaggacctgggtaccaagagggcactgagctggttaacacttaagctgtctgcagacagcaaaactaaaagagtgcactgtaacacacttccgcttgggctttgggagttgcaggcacccacccttagatgctactgtggggctggagcccaaaacacacccgacttggctcctgcacctgcctgcctgtgtgcttcccctcccataaggggtttgagtgtgcagtggcagaacatacgagccacaaccctgtcacatgtcctgcaaagggggtcagggaactctactgttt i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1403425 2 - 2520184 I e canFam3.chr16 16894010 0 - 59632846 C e mm10.chr8 86530868 500 - 129401213 I e otoGar3.GL873580 11198288 0 - 11315646 C a score=19971.000000 s hg38.chr4_KI270789v1_alt 65999 3 + 205944 caT s panTro5.chr4 192857658 3 + 194502333 caT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192741380 3 + 195804263 caT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777953 3 + 4876863 caT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663348 3 + 115148730 caT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946876 3 + 190429646 cGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894330 3 + 189454096 cGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272302 3 - 25927173 cgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3311496 3 + 4669795 cgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134270688 3 + 135778131 GGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2708583 3 - 2847728 cgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 830386 3 + 2368649 cGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189582381 3 - 190850796 caT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066268 3 - 14256875 caG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957925 3 - 2196201 caT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354145 3 - 5030052 GAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16894010 3 - 59632846 CAT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e dasNov3.JH570353 1403425 2 - 2520184 I e mm10.chr8 86530868 500 - 129401213 I e otoGar3.GL873580 11198288 0 - 11315646 C a score=46459.000000 s hg38.chr4_KI270789v1_alt 66002 4 + 205944 TTCC s panTro5.chr4 192857661 4 + 194502333 TTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192741383 4 + 195804263 TTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777956 4 + 4876863 TTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663351 4 + 115148730 TTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946879 4 + 190429646 TTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894333 4 + 189454096 TTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272305 4 - 25927173 ttcC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3311499 4 + 4669795 ttcC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134270691 4 + 135778131 TTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2708586 4 - 2847728 ttcC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 830389 4 + 2368649 TTCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189582384 4 - 190850796 TTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066271 4 - 14256875 TTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957928 4 - 2196201 TGCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354148 4 - 5030052 TTCC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16894013 4 - 59632846 CTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403427 4 - 2520184 TTTC i dasNov3.JH570353 I 2 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I e otoGar3.GL873580 11198288 0 - 11315646 C a score=1936192.000000 s hg38.chr4_KI270789v1_alt 66006 173 + 205944 ACTGGTTGATAT-GAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG---AAAAAAAAAGG------CTACAAAGTTGTAGTGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAATATCTTGGCATCACTAGGACTTTGAGCTTTACCCAATACGGG s panTro5.chr4 192857665 173 + 194502333 ACTGGTTGATAT-GAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG---AAAAAAAAAGG------GTACAAAGTTGTAGTGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAGCTCAATATCTTGGCATCACTAGGACTTTGAGCTTTACCCAATACGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192741387 172 + 195804263 ACTGGTTGATAT-GAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG----AAAAAAAAGG------GTACAAAGTTGTAGTGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAGCTCAATATCTTGGCATCACTAGGACTTTGAGCTTTACCCAATACGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3777960 175 + 4876863 ACTGGTTGATAT-GAGATTTTGCAAATGATACACTGTAGATGAGATACTCTCAAAGAAAAAAAAAAAAGG------CTACAAAGTTGTAGTGTTCAATTACCTTATTCATGAATAC-TTTTTCCTAACCTAATTAACTCAATATCTTGGCATCACTAGGACTTTGAGCTTTACCCAATACGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663355 172 + 115148730 ACTGGTTGATAG-GAGATTTTGCAAATGATACGCTGTAGATCAGATACTCTCAAAG---AAAAAAAAAGG------CTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTC-ATATCTTGGCATCACTAGGACTTTGAGCTTTACCCGATATGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188946883 175 + 190429646 ACTGGTAGATACAGAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG--AAAAAAAAAAAG------GTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894337 174 + 189454096 ACTGGTAGATACAGAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG---AAAAAAAAAAG------GTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272309 173 - 25927173 ACTGGTAGATACAGAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG----AAAAAAAAAG------GTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3311503 173 + 4669795 ACTGGTAGATACAGAGATGTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG----AAAGAAAAAG------GTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134270695 171 + 135778131 ACTGGTGGATAC-GAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG----AAAAAAAAGG------CTACAAAATTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAA-CTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2708590 173 - 2847728 ACTGGTAGATACAGAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG----AAAAAAAAAG------GTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 830393 173 + 2368649 ACTGGTAGATAC-GAGATTTTGCAAATGATACACTGTAGATCAGATACTCTCAAAG---AAAAAAAAAAG------CTACAGAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAGTATATTGGCATCACTAGGATTTTGAGCTTTACCCAATACTGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189582388 172 - 190850796 CCTGGTAGATAG-GAGATTTTACAAATGATAAACTGTAGTTCAGATACTCTCAGGG----GAAAAAAAAG------CTACAACGTTGTGGTGTTCAGTTACCCTATTCATGAGTACTTTTTTCCTAACCTCAGTAACTCAATATCTTGGCATCACTAGGATTTTGAGCTTTACCCGATACCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066275 177 - 14256875 AGTGGTAGATAT-GAGATTTTAC-AATGATAAGTTGTAGTTCAGATACTCTCAGGG----AAAAAAAAAAAAAAGCCTACCGAGTTGTAGAGTTCAATTACCTTATTCATGAATACTTTTTTCCTAACCTAATTAACTCAATATCTTGGCATCACTAGGATTTTGAGCTTTCCCCTATACCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 957932 173 - 2196201 ACTGGTAGATAT-GAGATTTTACAAATGATAAACTGTAGTTCAGATAGTCTCAGGG----AAAAAAAAAAG-----CTACAAAGTTGTAGAGTTCAATTACCTTATTCATGAATCCTTTTTTCCTAACCTAATTAACTCAATATCTTGGCATCACTAGGATCTTGAGCTTTACCCGATACCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354152 172 - 5030052 ACGGGTAGATAT-GAGATTTTACAAATGATAAACTGTAGTTCAGATACTCTCAAAG----AAAAAAGAAG------CTACAAAGTTGTAGAGTTCAGTTACCTTATTCATGAATACATTTTTCCTAACCTAATTAACTCAATATCTTAGCATCACTAGGATTTTGAGCTTTACCCGATACCAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198288 145 - 11315646 ACTGGTAGATTC-GAGATTTTGCAGAAGACAC-----AGTTCA-----------------AGAAAAAATG------TTACAAAATTGTAGAATTCAATTACCTTATTCATGAACCATTTTCTCCTAACCTGA---------TGTCTTGTTGTCAGTAGGATTTTGAGATTTACCTATTAATGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16894017 167 - 59632846 TTTGGTAGATAT-GATATTTTATAGGTGATATATTGTAGACCAGACATCTTCAAAG---ATAAAAAAATG------TTACAAGCTTATAGAGGTCAGTTACTTTAT------ATACTTTTTTCCTCATCTAATAAACTCAATGTGTTGAAATCACTAGGTTTTTGAGATTTACCTATTTCTAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403431 148 - 2520184 ACTGTTAGAGAT-GAGGTTTTGCAAATAA---ATTGTAGAACAGACATGTTGAAAA--------------------C-----------AGCGCTGAGTTTCCTAATTTGTGAACACTTTTCTCCTAACTGGGTGAACTCAATATCTGGGCATCACTAGGATTTTGAGATTTACCCATTACTAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I e mm10.chr8 86530868 500 - 129401213 I a score=5317410.000000 s hg38.chr4_KI270789v1_alt 66179 433 + 205944 T----TTCTTTCTTCCCGAAGCGTTTGTTTTACTGCCCCAT----TTTATTGCTTTCAATTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCACCA------CTATCCTCCCTGCTGTCACCTTC-ATTCTATCTGTTCCACCTAT-CTT-T-TGAGGACATCTAGAGTTGAGGTTATTAACCTTATATCATG-TTCC-CTTC-TCCCCCC-ATTTGTACTCATTTTGTTTAGTGT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACAGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCTTCCTGGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTAGGATCTGGACTTCAGTCAGACCAGCAACATATTCGC s panTro5.chr4 192857838 433 + 194502333 T----TTCTTTCTTCCCGAAGCGTTTGTTTTACTGCCCCAT----TTTATTGCTTTCAATTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTGCTGTCACCTTC-ATTCTATCTGTTCCACCTAT-CTT-T-TGAGGACATCTAGAGTTGAGGTTATTAACCTTATATCATG-TTCC-CTTC-TCCCCCC-ATTTGTACTCATTTTGTTTAGTGT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACAGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCTTCCTAGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTAGGATCTGGACTTCAGTCAGACCAGCAACAGATTCGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192741559 433 + 195804263 T----TTCTTTCTTCCCGAAGCGTTTGTTTTACTGCCCCAT----TTTATTGCTTTCAATTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTGCTGTCACCTTC-ATTCTATCTGTTCCACCTAT-CTT-T-TGAGGACATCTAGAGTTGAGGTTATTAACCTTATATCATG-TTCC-CTTC-TCCCCCC-ATTTGTACTCATTTTGTTTAGTGT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACAGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCTTCCTAGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTAGGATCTGGACTTCAGTCAGACCAGCAACAGATTCGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778135 432 + 4876863 T----TTCTTTCTTCCCGAAGCGTGTGTTTTACTGCCCCAT----TTTATTGCTTTCAATTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTGCCTGCTGTCACCTTC-ATTCTATCTGTTCCACCTAT-CTT-T-TGGGGACATCTCGAGTTGAGGTTATTAACCTTATATCATG-TTCC-CTTC-TCCCACC-ATTTGTACTCA-TTTGTTTAGTGT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACAGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCTTCCTGGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTAGGATCTGGACTTCAGTCAGACCAGCAACAGATTCGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663527 402 + 115148730 T----TTCTTTCTTCCCAAAGCGTTTGTTTTACTGCCCCAT----TTTATTGCTTTCAATTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCGTCACCTTC-ATTCTCTCTGTTCCGTCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATCTCATG-TTCC-CTTC-TCCCCCCTATTTGTATTCACTTTGTTTAGTGT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACTGAGTAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTAC----------------GTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTAGGATATGGATTTC------------------TTCGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947058 433 + 190429646 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCGTCACCTTA-ATTCTGTCTGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATTATG-TTCC-CTTC-TCCCTCC-ATTTGTACTCATTTTATTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCCCACTGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894511 433 + 189454096 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCGTCACCTTA-ATTCTGTCTGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATTATG-TTCC-CTTC-TCCCTCC-ATTTGCACTCATTTTATTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGAGA-CA-AACCCCAACTGCTTGCTCACTGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272482 433 - 25927173 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCGTCAACTTA-ATTCTGTCTGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATTATG-TTCC-CTTC-TCCCTCC-ATTTGTACTCATTTTATTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGAGA-CA-AACCCCAACTGCTTGCTCACTGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAAGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3311676 433 + 4669795 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATACTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCATCACCTTA-ATTCTGTCTGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATTATG-TTCC-CTTC-TCCCTCC-ATTTGTACTCATTTTATTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACTGAATAGCCTGCAGTCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACGTTGGCATCAC--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134270866 433 + 135778131 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCATCACCTTC-ATTCTGTCTGTTCCACCTAT-CTT-T-TAGGGACATCTCAAGTTGAGGTTATTAACCTTATATCATG-TTCC-CTTC-TCCCTCC-ATTTGTACTCATTTTGTTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACTGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACGTTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2708763 433 - 2847728 T----TTCTTTCTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTATTGCTTTCAGTTAATGAAATCTGATGCTAAAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCA------CTATCCTCCCTACCGTCACCTTC-ATTCTGTCTGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATTATG-TTCC-CTTC-TCCCTCC-ATTTGTACTCATTTTATTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACTGAATAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACATTGGCATCAC--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCCTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 830566 433 + 2368649 T----TTCTTTTTTCCTGAAGCATTTGTTTTACTGCCCCAT----TTTACTGCTTTCAGTTAATGAAATCTGATTCTAAAACCAAGAGTTCCTGAGGTGTTAGTCACCAGCA------CTATCCTCCCTACCGTCACCTTC-ATTCTGTCCGTTCCACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATAGCATG-TTCC-CTTC-TCCCTCC-ATTGGTACTCGTTTTGTTTAGTGT-AGGTAATTCAAATGTAAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTCACTGAAGAGCCTGCAATCTGCCTTTTGCAATGATCACTCCGTCCTGGAGGGTACATTGGCATCAT--TGAGTCTGATGGCACCTGCTTCTGCCATGTTAGAACACTGCCTGCAGCCGTTGGATCTGGACTTCAGTCAGACCAGCAACAGATTCGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189582560 433 - 190850796 TTCC-TCCTTTCTTCCCGAAGCGTTTGTTTTACTGCCTCAT----TTTATTGCTTTCAATTAGTGAAATCTGATTCT-AAACCAAGAGTTCCTGAGGTG-TAGCCACCAGCC------CTACCCTCCCTACTGTCACC-TC-ATTCTATCTGCTCAGCCTAC-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTGTATCCTG-TTCC-CTTCTTCCCTCT-ATTTGTATTCATTTTGTCCAAAAT-GGGTAATTCAAATGTAAATTGCTTTGGTCA-GA-AACCCCGACC-CTTGCTCACTGAATAGCCTGCAGTCTGCTGTTTGCAGTGATCATGCCGTCCTGGAGGGTGTGTTGGCATCCC--TGGGTCTGAAGGCACCTGCTTCTGTCATGTTAGAATGCTCCCTGCAGCCCTCGGATCTGGACCTCAGTCAGGCCAGCAACAGATGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066452 436 - 14256875 TTCC-TCCTTTCTTCCGGAAGCCTTTGTTTTACTGCCTCAT----TTTATTGCTTTCAATTAGTGAAATCTGATTCT-AAACCAAGAGTTCCTGAGGTGTTAGCCACCAGCC------CTATCCTCCCTACTGTCACCTTC-AGTCTATCTGTTCAACCTGT-CTT-T-TGGGGACATCTCAAGTTGAGATTATTAACCTTGTATCATG-TTCC-CTTCTTCCCTCT-GTTTGTGCTCATTTTGTCCAAAAT-GGGTAATTCAAATGCAAATTGTTCTGGTCA-GA-AACCCCAACCGCTTGCTCACTGAATAGCCTGCAATCTGCTCTTTGCAATGATCACTCCGTCCTGGAGGGTATGTTGGCATCCC--TGAGTCTGAAGGCACCTGCTTCGGTCACGTTAGAACGCTCCCTGCAGCCCTCGGATCTGAACCTCAGTCAGGCCAGCAACAGATTAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958105 436 - 2196201 TTCC-TCCTTTCTTCCTGAAGCCTTTGTTTTACTGCCTCAT----TTTATTGCTTTCAATTAGTGAAATCTGATTCT-AAACCAAGAGTTCCTGAGGCATTAGCCACCAGCC------CTCTCCTCTCTACTGTCACCTGC-ATTCTATCTGTTCAGCCTGT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACCTTATATCATG-TTCC-CGTCTTCCCTCC-ATTTGTACTCATTTTGTCCAAAAT-GGGTAATTCAAATGTAAATTGTTTTGGTCA-GA-AACCCCAACTGCTTGCTCACTGAATCGCCTGCAATCTGCTCTTTGCAATGATCACTCCGTCCTGGAGGGTATGTTGGCATCCC--TGAGTCCGAAGACACTTGCTTCTGTCACGTTAGAACGCTCCATGCAGCCCTCGGATCTGGACCTCAATCAGGCCAGCAACAGATTAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354324 421 - 5030052 TTCC-TCCTTTCTTCCCGAAGCGTTTGTTTTACTGCCTCAT----TTTATTGCTTTCAATTAGTGAAATCTGATTCT-AAACT--GAGTTCCTGAGGTGTTAGCCACCAGCC------CTATCCTCCCTACTGTCACC--------------TTCAACCTAT-CTT-T-TGGGGACATCTCAAGTTGAGGTTATTAACTTTATATCACG-TTCC-CTTCTTCCCTCT-ATTTGTACTCATTTTGTCCAAAAT-GGGTAATTCAAATGTGAATTGTTTTGGTCA-CA-AACCCCAACTGCTTGCTGACTGAATAGCCTGCAATCTGCTCTTTGCAATGACCACTCCGTCCTGGAGGGTACGTTGGCATCCC--TGAGTCTGAAGGCACCTGCTTCTGTCATGTTAGAATGCTCCCTGCAGCCCTCGGATCTGGACCTCAATCAGGCCAGCAACAGATTAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198433 414 - 11315646 CTCC-TTCTTTCTTCCTGAAGCATGTGTTTTACTGCCCCAT----TTTATTGCTTTCTGATAAGGAAGTGTA----------TGAAAATTCCTGAGGTGTTAACCACCAGCGCTCTCCCTCTCCTGCCTGAGGTTGCCACC-ATTCTATCTGTTCAACCTTT-CTTCT-TGGGGACATCTCAAGTCAAGGTTATTCTCATCACATCAGC-TTCCTCTTT-ACCCTCT-GTTCCTGTTC---CTGTCCTGTAT-GGGCCATTCAAATGTAAAT-----TGGGCA-CACAGCCCCAACTGCTGGCTCA-TGAATGCCCTGTTACCCGCTTTTTCTAATGATCACTTCATCCTGACA--CACTTAGGCCTCTT-----------AGGCACGTGCCTCCCCTGTGCTAGAACAATCCCTGCAGCC-TTGGGTCTGAACTTGAATGAGGCCTGCAGCAGCAGAGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86531368 438 - 129401213 t----ttctttctttctGAAGATTTTGTTCTGCTGACCCATTTAATTAATTGCTTCCAACTAATGAACTCTAATTCTAAAATCAAGGCCTCCTGCAGTGCTGGCCAGTAGCA------CTTTCTGTCCCACTGTTATCTTCTATTCGGTCTGTTCAACCTCT-CTT-TATGGGGACATCTCATGCTAAGGTTATTAACCTCACATCATG-TGCC-CATC-TCCCCTT-CTTTGTACTCATTTTGTCCAGTGTGGGGCAATTCAAAAGTAAAACGTTTCGGCCA-TA-AATCCCAAGTCCTTACTCATGGAATATGCTGCAATCTACTCCGTGCAATCAGCAGGCCATTCTGGAG-GCCCATTCATAGCCG--TGAGTATTAGAGCAAATACCTCTGCAGTGTTAGAAGACT-CCCACAGCCCTTGGACATGAACTTCAATGAGGTCAGTGGCAGAACTGA i mm10.chr8 I 500 C 0 s canFam3.chr16 16894184 431 - 59632846 -TTTGTCCTTTCCTACTAAAGCATTTGTTTCACTGCCTCAT----TTTATTGCTTTCAATTAATGAAATCCAATTCTAAAACTACAATTTCCTCAGGTATTAGCTACCAGTA------CTATCCTCCCCACTGTCATCTCC-ATTCTATCTATTCAGTGTCT-CTTTT-TGGGGACATCCCAAGTTAAGGTTATTAACCTCACATCATGCTTCT-CTTT-GCCCTTC-ACTTGTACTCATTTTGTCTGGCTT-GGGTAATTCCAGAGTAAATTATTTTGGTCA-CA-AA-ACCAACTCCTTGCTCAAAGCAT-GCCTTGAATCTGCTTTTTGCAGTGAGCAGTCCATCCTGGAAGGCATTTTGGAATCTTTCTAAGTCTGATGACATCTATCTCTGCTATGTCAGAACACCCCCTGTGACTTT--GATCTGAACTTCAATGAGGTCAGGAAGAGT----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403579 395 - 2520184 -TTC-CTCCTTTCCCCTGAAGCACTTGCTTTCCTGTCCCAT----TTTACTGCTTTCAATTAATGAAATCCAATTCGGAGACCAAAGTTTCCCGAGGTGTTA--------------------CCTCCTTCCTGTCGTCTCC-AC----TCTGCTCAGCCTCTCCTT-T-TGGGGACATCTTAAGTTAAGGTTGTTAAGCTCACATCATG-TTTC-CCTT-TCTCCTC-ATTTGCACTCGTCTT-TCCAGTGT-GGGTAATTCAGATGTAAATGGTTTTGGTCACCA-AACCCCAAC------------GTATAGCCTGCCCTACACA----GCAGTGGTCAGCCC--CCTGGAAGGTGGGCTAACCCCCT--CCAGCCTGACGGTGCCTCCTTCTGCCACGTGAGATC-CCCCCTGCAGCCTCAGATACCTAACTTCTGTTATGCCAGTAAAGAGC---- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I e micMur3.chr14 17475897 1377 - 93316391 I a score=314394.000000 s hg38.chr4_KI270789v1_alt 66612 30 + 205944 --TTTTTTCTCTTCTTTGTTTGCCTATTTCTC s panTro5.chr4 192858271 30 + 194502333 --TTTTTTCTCTTCTTTGTTTGCCTATTTCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192741992 30 + 195804263 --TTTTTTCTCTTCTTTGTTTGCCTATTTCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778567 30 + 4876863 --TTTTTTCTCTTCTTTGTTTGCCTATTTCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663929 30 + 115148730 --TTTTTTCTCTTCTTTGTTTGCCTATTTCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947491 30 + 190429646 --TTTTTTCTCTTCTTTGTTTGCCTGTTTCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894944 30 + 189454096 --TTTTTTCTCTTCTTTGTTTGCCTGTTTCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272915 30 - 25927173 --TTTTTTCTCTTCTTTGTTTGCCTGTTTCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312109 30 + 4669795 --TTTTTTCTCCTCTTTGTTTGCCTGTTTCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271299 30 + 135778131 --TTTTTTCTCTTCTTTGTTTGCCTGTTTCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709196 30 - 2847728 --TTTTTTCTCCTCTTTGTTTGCCTGTTTCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 830999 30 + 2368649 --TTTTTTCTCTTCTTTGTTTGCCTGTTTCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189582993 29 - 190850796 --TTTCTTACCTTCTTT-TTTGCCTAGGGCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066888 29 - 14256875 --TTTCTCACCTTCTTT-TTTGCCTAGTTCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958541 29 - 2196201 --TTTCTTACCTTCTTT-TTTGCCTAGTTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354745 29 - 5030052 --TTTCTTACCTTCTTT-TTTGCCTAGTTCTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477274 30 - 93316391 --TTTTTTCTCTTCTTTGTTTCACTGCTCCTG i micMur3.chr14 I 1377 C 0 s otoGar3.GL873580 11198847 24 - 11315646 --TTTTCTCTTTCCTTCATTTGACTG------ i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86531806 28 - 129401213 ----CTTATTCCTCTCTGTTCAAACGCTTCCG i mm10.chr8 C 0 C 0 s canFam3.chr16 16894615 26 - 59632846 --GGTTTTCTCTTCTTTGATTGCTCCTG---- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1403974 32 - 2520184 TTTCTTCCCTTCTCTTTGTTTTACTGTCTCTG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3896410 2195 + 3993831 I a score=134548.000000 s hg38.chr4_KI270789v1_alt 66642 13 + 205944 TGTCTTCTAATTG s panTro5.chr4 192858301 13 + 194502333 TGTCTTCTAATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742022 13 + 195804263 TGTCTTCTAATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778597 13 + 4876863 TGTCTTCTAATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663959 13 + 115148730 TGTCTTCTAATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947521 13 + 190429646 TGTCATCTAATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894974 13 + 189454096 TGTCATCTAATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272945 13 - 25927173 TGTCATCTGATTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312139 13 + 4669795 TGTCATCTGATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271329 13 + 135778131 TGTCATCTGATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709226 13 - 2847728 TGTCATCTGATTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831029 13 + 2368649 TGTCATCTGATTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583022 9 - 190850796 TGTC----GATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066917 9 - 14256875 TGTC----GATTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958570 9 - 2196201 TGTT----GATTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354774 9 - 5030052 TGTC----GGTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477304 13 - 93316391 TGTCTCCTAATTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3898605 13 + 3993831 TGTCTCCTAATTA i proCoq1.NW_012145301v1 I 2195 C 0 s otoGar3.GL873580 11198871 10 - 11315646 ---CTCCTAATTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86531834 13 - 129401213 AGTTTCCTAATTA i mm10.chr8 C 0 I 159 s canFam3.chr16 16894641 13 - 59632846 TGTCTCCTAATTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404006 13 - 2520184 CTTCTCTTAATTA i dasNov3.JH570353 C 0 C 0 a score=372725.000000 s hg38.chr4_KI270789v1_alt 66655 24 + 205944 TTTTAAAGGTGAAGGAGAGTAGTA s panTro5.chr4 192858314 24 + 194502333 TTTTAAAGGTGAAGGAGAGTAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742035 24 + 195804263 TTTTAAAGGTGAAGGAGAGTAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778610 24 + 4876863 TTTTAAAGGTGAAGGAGAGTAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663972 24 + 115148730 TTTTAAAGGTGAAGGAGAGTAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947534 24 + 190429646 TTTTAAAGGTGAAGGAAAGTAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187894987 24 + 189454096 TTTTAAAGGTGAAGGAAAGTAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272958 24 - 25927173 TTTTAAAGGTGAAGGAAAGTAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312152 24 + 4669795 TTTTAAAGGTGAAGGAAAGTAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271342 24 + 135778131 TTTTAAAGGTGAAGGAAAGTAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709239 24 - 2847728 TTTTAAAGGTGAAGGAAAGTAGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831042 24 + 2368649 TTTTAAAGGTGAAGGAAAGTAGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583031 18 - 190850796 TTTTAAAGGTGAAGGAG------A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066926 24 - 14256875 TTTTAAAGGTGAAGGAGAGTAGTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958579 24 - 2196201 TTTTAAAGGTGAAGGAGAGTGGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354783 24 - 5030052 TTTTAAAGGTGAAGGAGAGTAGTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477317 24 - 93316391 TTTTAAAGGTGAAGGAGAATAGTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3898618 24 + 3993831 TTTTAAAGGTGAAGGAGAACAGTA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198881 24 - 11315646 TTTTACAGGTGAAGGAGAATGGTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16894654 24 - 59632846 TTTTAAAGCTGAAAAGGAATGATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404019 24 - 2520184 TTTTAGATATGAACGAGTGTTTTT i dasNov3.JH570353 C 0 I 72 e mm10.chr8 86531847 159 - 129401213 I a score=53602.000000 s hg38.chr4_KI270789v1_alt 66679 4 + 205944 GTAC s panTro5.chr4 192858338 4 + 194502333 GTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742059 4 + 195804263 GTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778634 4 + 4876863 GTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112663996 4 + 115148730 GTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947558 4 + 190429646 GTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895011 4 + 189454096 GTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272982 4 - 25927173 GTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312176 4 + 4669795 GTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271366 4 + 135778131 GTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709263 4 - 2847728 GTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831066 4 + 2368649 GTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583049 4 - 190850796 GTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066950 4 - 14256875 GTAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958603 3 - 2196201 -TAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354807 4 - 5030052 GTAC i aotNan1.NW_018492112v1 C 0 I 137 s micMur3.chr14 17477341 4 - 93316391 GTAA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3898642 4 + 3993831 GTAT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198905 4 - 11315646 GTAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16894678 4 - 59632846 GGTC i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1404043 72 - 2520184 I e mm10.chr8 86531847 159 - 129401213 I a score=98724.000000 s hg38.chr4_KI270789v1_alt 66683 8 + 205944 AGAaataa s panTro5.chr4 192858342 8 + 194502333 AGAaataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742063 8 + 195804263 AGAaataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778638 8 + 4876863 AGAaataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664000 5 + 115148730 AGA---AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947562 8 + 190429646 AGAaataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895015 8 + 189454096 AGAaataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272986 8 - 25927173 AGAAATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312180 8 + 4669795 AGAAATAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271370 8 + 135778131 AGAAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709267 8 - 2847728 AGAAATAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831070 8 + 2368649 AGAaataa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583053 8 - 190850796 AGAAATAA i calJac3.chr3 C 0 I 134 s saiBol1.JH378165 13066954 8 - 14256875 AGAAATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958606 8 - 2196201 AGAAATAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354948 8 - 5030052 agaaaTAA i aotNan1.NW_018492112v1 I 137 C 0 s micMur3.chr14 17477345 8 - 93316391 GGaaataa i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3898646 8 + 3993831 GGAAATAA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198909 8 - 11315646 GCAAATCA i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894682 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I a score=15561.000000 s hg38.chr4_KI270789v1_alt 66691 1 + 205944 t s panTro5.chr4 192858350 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742071 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778646 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664005 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947570 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895023 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272994 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312188 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271378 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709275 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831078 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583195 1 - 190850796 T i calJac3.chr3 I 134 C 0 s saiBol1.JH378165 13066962 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958614 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354956 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477353 1 - 93316391 t i micMur3.chr14 C 0 I 75 s proCoq1.NW_012145301v1 3898654 1 + 3993831 T i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198917 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894682 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I a score=5362.000000 s hg38.chr4_KI270789v1_alt 66692 1 + 205944 a s panTro5.chr4 192858351 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742072 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778647 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664006 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947571 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895024 1 + 189454096 a i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 831079 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583196 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066963 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958615 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 I 135 s aotNan1.NW_018492112v1 3354957 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3898655 1 + 3993831 A i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198918 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17477354 75 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894682 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I e manLeu1.NW_012102221v1 2709276 0 - 2847728 C e chlSab2.chr7 134271379 0 + 135778131 C e cerAty1.NW_012001672v1 3312189 0 + 4669795 C e macNem1.NW_012013133v1 24272995 0 - 25927173 C a score=16721.000000 s hg38.chr4_KI270789v1_alt 66693 3 + 205944 ata s panTro5.chr4 192858352 3 + 194502333 ata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742073 3 + 195804263 ata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778648 3 + 4876863 ata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664007 3 + 115148730 ATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947572 3 + 190429646 ata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895025 3 + 189454096 ata i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3312189 1 + 4669795 --A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271379 1 + 135778131 --A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709276 1 - 2847728 --A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831080 3 + 2368649 ata i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583197 3 - 190850796 ACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13066964 3 - 14256875 ACA i saiBol1.JH378165 C 0 I 136 s cebCap1.NW_016107886v1 958751 3 - 2196201 ACA i cebCap1.NW_016107886v1 I 135 C 0 s aotNan1.NW_018492112v1 3354958 3 - 5030052 ACA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3898656 3 + 3993831 GTa i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11198919 3 - 11315646 GTG i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17477354 75 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894682 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I e macNem1.NW_012013133v1 24272995 0 - 25927173 C a score=12376.000000 s hg38.chr4_KI270789v1_alt 66696 1 + 205944 a s panTro5.chr4 192858355 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742076 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778651 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664010 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947575 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895028 1 + 189454096 a i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3312190 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271380 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709277 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831083 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583200 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067103 1 - 14256875 A i saiBol1.JH378165 I 136 C 0 s cebCap1.NW_016107886v1 958754 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354961 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3898659 1 + 3993831 a i proCoq1.NW_012145301v1 C 0 I 66 s otoGar3.GL873580 11198922 1 - 11315646 A i otoGar3.GL873580 C 0 I 22 e micMur3.chr14 17477354 75 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894682 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I e macNem1.NW_012013133v1 24272995 0 - 25927173 C a score=246349.000000 s hg38.chr4_KI270789v1_alt 66697 32 + 205944 cacaa--------------aattaaaattaaattaaaatgt-aaaaa s panTro5.chr4 192858356 32 + 194502333 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742077 32 + 195804263 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778652 32 + 4876863 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664011 32 + 115148730 CACAA--------------AATTAAAATTAAATTAAAATGT-AAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947576 32 + 190429646 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895029 32 + 189454096 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24272995 24 - 25927173 -ACAA--------------AATTA-----AAATTAAAATGT-GAA-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312191 27 + 4669795 CACAA--------------AATTA-----AAATTAAAATGT-GAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271381 32 + 135778131 CACAA--------------AATTAAAATTAAATTAAAATGT-AAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709278 27 - 2847728 CACAA--------------AATTA-----AAATTAAAATGT-GAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831084 32 + 2368649 cacaa--------------aattaaaattaaattaaaatgt-aaaaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583201 28 - 190850796 CACAA--------------AATTAAAG-----TTAAAATGTAAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067104 32 - 14256875 CACAA--------------AATTAAAGTTAAATTAAAATGT-AAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958755 32 - 2196201 CACAA--------------AATTAAAGTTAAATTAAAATGT-AAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354962 32 - 5030052 CACAA--------------AATTAAAGTTAAATTAAAATGT-AAAAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11198945 46 - 11315646 tacaaattcaattctatttaatttaaatgaaataacaattt-taaaa i otoGar3.GL873580 I 22 C 0 s canFam3.chr16 16894682 3 - 59632846 --------------------------------TTA------------ i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3898660 66 + 3993831 I e micMur3.chr14 17477354 75 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I e mm10.chr8 86531847 159 - 129401213 I a score=12376.000000 s hg38.chr4_KI270789v1_alt 66729 1 + 205944 a s panTro5.chr4 192858388 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742109 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778684 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664043 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947608 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895061 1 + 189454096 a i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3312218 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271413 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709305 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831116 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583229 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067136 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958787 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354994 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477429 1 - 93316391 a i micMur3.chr14 I 75 C 0 s otoGar3.GL873580 11198991 1 - 11315646 a i otoGar3.GL873580 C 0 I 3 e proCoq1.NW_012145301v1 3898660 66 + 3993831 I e dasNov3.JH570353 1404043 72 - 2520184 I e canFam3.chr16 16894685 0 - 59632846 C e mm10.chr8 86531847 159 - 129401213 I e macNem1.NW_012013133v1 24273019 0 - 25927173 C a score=1009029.000000 s hg38.chr4_KI270789v1_alt 66730 68 + 205944 taaGTACAGAATTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA s panTro5.chr4 192858389 68 + 194502333 taaGTACAGAATTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742110 68 + 195804263 taaGTACAGAATTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778685 68 + 4876863 taaGTACAGAATTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664044 68 + 115148730 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATATTGGTTCCAAGTGCTTTAG---------GTTGGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947609 68 + 190429646 taaGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895062 68 + 189454096 taaGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273019 57 - 25927173 -AAGTACAGAACTAATTTTTCTCTGGCTTGAAT-----TTAAAATGTTAA----------TTTAG---------GTTGGAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312219 68 + 4669795 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271414 68 + 135778131 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709306 68 - 2847728 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831117 68 + 2368649 taaGTACAGAACTAATTTTTCTGTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583230 68 - 190850796 TAAGCACAGGACTAATCTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067137 68 - 14256875 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGTTTTAG---------GTTGGAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958788 68 - 2196201 TAAGTACAGAACTAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCACGTGCTTTAG---------ATTGGAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3354995 68 - 5030052 TAAGTACAGAACGAATTTTTCTCTGGCTTGATT-----TTAAAATGTTAGTTCCAAGTGCTTTAG---------GTTGGAGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477430 68 - 93316391 taagtacagaaataaTTTTTCTCTGGCTTGATT-----TAAAAATGTTAGTTTTAAGTGCTTTCG---------GTTGGAGA i micMur3.chr14 C 0 I 93 s proCoq1.NW_012145301v1 3898726 68 + 3993831 taaatacagaaataaTTTTTCTCTGGCTTGATT-----TAAAAACGTTAGTCCTAAGTGCTTTAG---------GTTGGAGA i proCoq1.NW_012145301v1 I 66 I 85 s otoGar3.GL873580 11198995 70 - 11315646 TGAGTACAGAAATCATTATTCTCTGGCTTGATTTAGAATAAAGGTGTTAGTTGCAAGTGCTTTAG---------GTCTG--- i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16894685 76 - 59632846 -AAGTGCAGAAATAATATTTCTCTGGTTTGATT-----TTACAATATTAGTTCCAGGTGCTTTAGGACCATTTAGCTGGAGA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1404043 72 - 2520184 I e mm10.chr8 86531847 159 - 129401213 I a score=79665.000000 s hg38.chr4_KI270789v1_alt 66798 8 + 205944 ---TGTTTCCG s panTro5.chr4 192858457 8 + 194502333 ---TGTTTCCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742178 8 + 195804263 ---TGTTTCCG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778753 8 + 4876863 ---TGTTTCCG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664112 8 + 115148730 ---TGTTTCCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947677 8 + 190429646 ---TGTTTCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895130 8 + 189454096 ---TGTTTCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273076 8 - 25927173 ---TGTTTCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312287 8 + 4669795 ---TGTTTCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271482 8 + 135778131 ---TGTTTCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709374 8 - 2847728 ---TGTTTCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831185 8 + 2368649 ---TGTTTCTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583298 8 - 190850796 ---GGTTTCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067205 8 - 14256875 ---TGTTTCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958856 8 - 2196201 ---TGTTTCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355063 8 - 5030052 ---TGTTTCTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11199065 5 - 11315646 ------TTCTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16894761 11 - 59632846 TATTACTTTTA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3898794 85 + 3993831 I e micMur3.chr14 17477498 93 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I e mm10.chr8 86531847 159 - 129401213 I a score=347613.000000 s hg38.chr4_KI270789v1_alt 66806 35 + 205944 ACCCGAGCATGTCTTCCCC--CACGTAAGCATCCCTT s panTro5.chr4 192858465 35 + 194502333 ACCCGAGCATGTCTTCCCC--CACATAAGCATCCCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742186 35 + 195804263 ACCCGAGCATGTCTTCCCC--CACGTAAGCATCCCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778761 35 + 4876863 ACCCGAGCATGGCTTCCCC--CACGTAAGCATCCCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664120 35 + 115148730 ACCCGAGCATGGCTCCGCC--CACGTAAGCATCCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947685 35 + 190429646 ACCCGAGCATGGCTCCCCC--CATGTAAGCATCCCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895138 35 + 189454096 ACCCGAGCATGGCTCCCCC--CATGTAAGCATCCCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273084 35 - 25927173 ACCTGAGCATGGCTCCCCC--CACGTACGCATCCCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312295 35 + 4669795 ACCCGAGCATGGCTCTCCC--CACGTAAGCATACCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271490 35 + 135778131 ACCTGAGCATGGCTCCCCC--CACGTAAGCATCCCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709382 35 - 2847728 ACCCGAGCATGGCTCCCCC--CACGTAAGCATCCCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831193 35 + 2368649 ACCCGAGCATGGCTCCCCC--CACGTAAGCATCCCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583306 37 - 190850796 ACCCGAGCATGGCTCCCCCAACCCATAGGCATCTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067213 37 - 14256875 ACCTGAGCATGGCTTCCCCAACCCATAAGCATCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958864 37 - 2196201 ACCCGAGCATGGCTCCCCCAACCCATAAGCAACTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355071 37 - 5030052 ACCCGAGCATGGCGCCCCCAACCCATAAGCATCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11199070 35 - 11315646 ATCAGAGCCTGGTCTTTCT--TCTGTAAGCCCCCCTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532006 35 - 129401213 ATCTGAGTGTGGTTCTTCT--ACTACAAGCACCCTGT i mm10.chr8 I 159 C 0 s canFam3.chr16 16894772 35 - 59632846 GTTACAGTGCATTTCCTCC--ACCGTAAAGGGCCCCT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3898794 85 + 3993831 I e micMur3.chr14 17477498 93 - 93316391 I e dasNov3.JH570353 1404043 72 - 2520184 I a score=8360.000000 s hg38.chr4_KI270789v1_alt 66841 1 + 205944 -C s panTro5.chr4 192858500 1 + 194502333 -C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742221 1 + 195804263 -C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778796 1 + 4876863 -C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664155 1 + 115148730 -C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947720 1 + 190429646 -C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895173 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273119 1 - 25927173 -C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312330 1 + 4669795 -C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271525 1 + 135778131 -C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709417 1 - 2847728 -C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831228 1 + 2368649 -C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583343 1 - 190850796 -C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067250 1 - 14256875 -C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958901 1 - 2196201 -C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355108 1 - 5030052 -C i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11199105 1 - 11315646 -C i otoGar3.GL873580 C 0 I 36 s mm10.chr8 86532041 1 - 129401213 -C i mm10.chr8 C 0 I 17 s canFam3.chr16 16894807 1 - 59632846 -C i canFam3.chr16 C 0 I 38 s dasNov3.JH570353 1404115 1 - 2520184 A- i dasNov3.JH570353 I 72 C 0 e proCoq1.NW_012145301v1 3898794 85 + 3993831 I e micMur3.chr14 17477498 93 - 93316391 I a score=114508.000000 s hg38.chr4_KI270789v1_alt 66842 8 + 205944 ACACATTc s panTro5.chr4 192858501 8 + 194502333 Acacattc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742222 8 + 195804263 Acacattc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778797 8 + 4876863 Acacattc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664156 8 + 115148730 ACACATTc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947721 8 + 190429646 Acacagtc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895174 8 + 189454096 Acacagtc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273120 8 - 25927173 ACACATTc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312331 8 + 4669795 Acacagtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271526 8 + 135778131 ACACATTc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709418 8 - 2847728 Acacagtc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831229 8 + 2368649 ACACATTc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583344 8 - 190850796 ACATATTc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067251 8 - 14256875 ACATATTc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958902 8 - 2196201 ACATATTc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355109 8 - 5030052 ACATATTc i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3898879 8 + 3993831 acacattc i proCoq1.NW_012145301v1 I 85 C 0 s otoGar3.GL873580 11199142 8 - 11315646 acacgtgc i otoGar3.GL873580 I 36 C 0 s mm10.chr8 86532059 8 - 129401213 AAACAGTT i mm10.chr8 I 17 C 0 s canFam3.chr16 16894846 8 - 59632846 acatattt i canFam3.chr16 I 38 C 0 s dasNov3.JH570353 1404116 8 - 2520184 ACATATTC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17477498 93 - 93316391 I a score=4775316.000000 s hg38.chr4_KI270789v1_alt 66850 327 + 205944 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacgtctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatttctgggacagggatcctatctccaagagttg-ttgaaaggattaaatgatacagtgcacttaatgttcctggtagataagaagt--gctctataagtagtga-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATATACTCTGCAATTCCGTGCTGCTTTCATACGTTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATTTTTCAGGG s panTro5.chr4 192858509 327 + 194502333 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacgtctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatctccaagagttg-ttgaaaggattaaatgatacagtgcacttaatgttcctggtagataagaagt--gctctataagtagtga-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATATATTCTGCAATTCCGTGCTGCTTTCATACGTTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATTTTTCAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742230 327 + 195804263 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacgtctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatctccaagagttg-ttgaaaggattaaatgatacagtgcacttaatgttcctggtagataagaagt--gctctataagtagtga-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATATACTCTGCAATTCCGTGCTGCTTTCATACGTTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATTTTTCAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3778805 327 + 4876863 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacatctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcttatctccaagagttg-ttgaaaggattaaatgatacagtgcacttaatgttcctggtagataagaagt--gctctataagtagtga-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATATACTCTGCAATTCCGTGCTGCTTTCATACGTTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATTTTTCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664164 327 + 115148730 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacgtctcaccagctgtataatc------ttgggaaagt----aggaaattcactttacttctttatctctgggacagggatcctatctccaagagttg-ttgaaaggattaaatgatacagtgcacttaaagttcctggtagataagaagc--actctataagtagtga-ccatt---tttATCATCTGT----GTAGATGTTAAAGTT-----TGCCTGGGTATTCTAGGATTATATACTCTGCAATCCCATGCTGCTTTCATACATTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATTTTTCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188947729 327 + 190429646 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacctctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaggggttg-ttgaaaggattaaatgatacagtgtacttaacgttcctggtagataagaagc--actccagaagtagtgg-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACTCTGCAATCCCGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895182 327 + 189454096 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacctctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaggggttg-ttgaaaggattaaatgatacagtgtacttaacgttcctggtagataagaagc--actccagaagtagtgg-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACCCTGCAATCCCGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCGAGGACACTGAGAAAAGATTTTTCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273128 327 - 25927173 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacctctcaccagctgtataatc------ttcggacagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaggggttg-ttgaaaggattaaatgatacagtgtacttaacgttcctggtagataagaacc--actccagaagtagtgg-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACTCTGCAATCCCGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312339 327 + 4669795 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacctctcaccagctgtctaatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaggggttg-ttggaaggattaaatgatacagtgtacttaaagttcctggtagataagaagc--actccagaagtagtgg-ccatt---tttATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACTCTGCAATCCTGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271534 327 + 135778131 tttgaaa---tcag-ctgctctgatcctaaatgtaggcct---cacctctcaccaactgtataatc------ttgggaaagt----aggaaactcactttactactttatctctgggacagggatccaacccccaagggttg-ttgaaaggattaaatgatacagtgtacttaaagttcctggtagataagaagc--actccataagtagtgg-cCATT---TTTATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACTCTGCAATCCTGTGCTGCTTTCATACATTTCCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709426 327 - 2847728 tttgaaa---tcag-ctgctctcatcctaaatgtaggcct---cacctctcaccagctgtctaatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaggggttg-ttgaaaggattaaatgatacagtgtacttaaagttcctggtagataagaagc--actccagaagtagtgg-ccatt---tttATCATCTGT----GTAGATGTTAAAGTT-----TGCCAGGATATTCTAGGATTATCTACTCTGCAATCCCGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831237 327 + 2368649 tttgaaa---tcag-ctgctctgatcctaaaggtaggcct---cacctctcaccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatctctgggacagggatcctatccccaagggttg-ttgaaaggattaaatgatacagtgtacttaaagttcctggtagataagaagc--actccacaagtagtgg-ccatt---tttATCATCTGT----GTAGATGTTAAAGTT-----TGTCAGGATATTCTAGGATTATATACTCTGCAATCCCGTGCTGCTTTCATACATTTGCTCTGATAAAACTACCCTAGGACACTGAGAAAAGATTTTTCAGGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583352 311 - 190850796 tttgaaa---tcag-ctgctgtgatcctaaatgtaggccc---cacctctcgccagctgtgtaatc------tcgggaaagt----aggaaactcactttacttctttatctgtaagacagggatcctatctccaagggtt------gaggattaaatgatacagtgtacttacagttcctggtagataagaagc--actccataggtagtgg-ccatt---tttATCATCTGT----G-------TAAAGTT-----TGCC-GGATATTCTAGGATTCTATACTCTGCAATCTAGTGCTGTTTTCATACATCTGCTCT-ATAAAACTTCCCTAGGACAC--AGAAAAGATATTTCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067259 320 - 14256875 tttgaaa---ccag-ctgcggtgatcctaaatgtaggccc---ctcctctccccagctgtataatc------ttgggaaagc----aggaaacacactttacttttttatctgtaagacacggatcctatctccaagggttg-ctgagaggattaaatgatacagtgtatctacagttcctggtagataagaagc--cctctgtaagtagtga-cCATT---TTTATCATCTGT----G-------TAAAGTT-----TGCCAGGATATTCTGGGATTCTATACTCTGCAATCTAGTGCTGTTTTCATGCATTTGCTCTGAAAAAATTTCCCTAGGACACCGAGAAAAGATATTTCAGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 958910 319 - 2196201 tttgaaa---tcag-ctgctgtgatcctacatgtaggccc---cacttctccccagctgtgtaatc------ttggg-aagt----agaaaacgcactttacttctttacctgtaagacggggatcctatctccaagggctg-tcgagaggattaaatgatacagtgtacttacagttactggtagataagaagc--actccataagtagtga-ccatt---tttATCATCTGT----G-------TAAAGTT-----TGCCAGGATATTCTAGGATTCTATACTCTGCAATCTAGTGCTGTTTTCTTACATTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATAGTTCAGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355117 319 - 5030052 tttgaaa---tcag-ctgctgtgatcctaaatgtaggccc---cacctctccccagctgtataatc------ttgggaaagt----aggaaactcactttacttctttatccgtaagacagggatcctatctccaagggttg-ttgagaggattaaatgatacagtgta-ttaaagttcctggtagataagaagc--actccataagtagtga-ccatt---tttATCATCTGT----G-------TACAGTT-----TGCCAGGATATTCTAGGATTCTATACTCGGCAATCTAGTGACGTTTTCATACATTTGCTCTGATAAAACTTCCCTAGGACACTGAGAAAAGATATTTCAGGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477591 326 - 93316391 tttgaaa---tcagattgctctgggcctaaacatgggccc---cacctctcagcagctgcgtaatc------ttgggaaagt----aggaaactctcttcacttgtttacctgt-----agggatcctatctccaagagttgtttgaaaggattaaatgatacaaagtacttaaagttcctggaagataagaagctagctccacaaatagtga-cCATG---TTTATCATCTGT----GTAGACATTAACATT-----TGCCAGGATGTTCTAGGATTACACACTCTGTGATTCAGTGCTGCTTTCATATATTTACTGTGATAAAACTTTCCCAGGACACTGAGAGAAGACTTTGCAGGG i micMur3.chr14 I 93 C 0 s proCoq1.NW_012145301v1 3898887 330 + 3993831 tttgaga---tcagatcgctctgggcctaaacatgggccc---cgcctctcagcagctgtgtaatc-----tttgggaaagt----aggaaactctcttcacttctttatctgtaggacagggatcctatctccaagagttgtttgaaaggattaaatgatacaaagtacttaaagtttctggaagataagaagt--gctccacaaatagtgg-cCATT---TTTATCATCTGT----GCAGATGGGAACGTT-----TGCCAGGATGTTCTAGGATTATACACTCTGTGATTCAGTGCTGCTGTCCTATATTTACTGTGATAAAACTTCCCTAGGACACTGAGAGATGACTTTGTAGGG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11199150 320 - 11315646 ttggaaa---tctggttgcttt-gcccccctcatcccccccatcacttctcaccacctgtataacctgatctccgggaaagt----aagaaa--ctcttcacttctttacctgtaagacagggatcctatctgcaagagctatttgaaaggactaaatgacacaaagcacttaaaactcctgggataTAAACCGC--ACTCCACAAATAGGGA-CCATT---TCTATCACTGGTCACAGTTGATAGAAACGTTAAGTGTGCCCGGATACTCTAGGACTGTGTCCTCTGTCATTCAGTACTGTTTTCATAAACTTACTCT------------------------GAGAAGACTTTGCAGGG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532067 323 - 129401213 ATAGAAAAGGTAGG-CTGCTGTGGGCATGAAAATGGGGCC---TGACTCTTTCAAG--------TC------TTAGGATGAT----AGCAAACTTCCTTCTTGTTCCTAACTCTAAGACAGGGATTCTATCTTCAGGAGTCC-TCAAAACAATTGAAGAAGGCA-TTTACTTAAAATTT-TGGCAGATGTAACCT--TTCACGTAAAGAGGAATCCATTTTCTTTTTCATCTGT----TTAGACATCACTGTA-----TGCTAGGGCGTACCAGAGTTGTGTGCTCTGTAATACAGTTTTGGTCTTACACATTTTTACTGATAAAAGATTTCTCAGAGA-TGAGAAAAGATTTCTCAAAG i mm10.chr8 C 0 I 379 s canFam3.chr16 16894854 325 - 59632846 tttgaaa---tcagattgttgtaagattaaacctgggccc---cacattttactagctgtataatt------ttgataaagt----aggaagctctatttacttctttatctgtaggatgtggatcctatctccaagcattg-tggaagggattaaatgagaccatgtacttaaactccctgatagataagaagc--actttataaatagtga-ctat----tttatCATTTGT----GTACATGTTAAAGTT-----TTCCAGGATATTTTGGGATTATATGCTCTGTCATTTAATACTGCTTTCATACATTTAGTCTGATAACACTTCCCTAGGACACT--GAAAAAATACTTCAGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404124 306 - 2520184 TTTGAAA---TCAA-CTGA---GCCTTTAGACATGGGACT---TGCT-------------------------TTGGGAAAGGGTGAAAGAAATTCTcttcacttctttttctgtagaacaaggatcctatctg-aaaggtta-ctgaaatgatgaaatgagg-aaagtgcttcaagttactggtagataagaagc--actccgtaaatggcaa-cCATT---TTGATCATCTGC----ATAGATGTTAAAGTT-----TGCCAGGATATTTTAGGACAATACATGCTGTAGTAAAGTACTCTTTTCATACACTTACTATGATAAAACTGT-CTAGGATATTGAAAAAAGTCTTTTCATGG i dasNov3.JH570353 C 0 C 0 a score=751899.000000 s hg38.chr4_KI270789v1_alt 67177 60 + 205944 CTGACTAAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCTT----AAGAAAGAAAAAAAAA s panTro5.chr4 192858836 60 + 194502333 CTGACTAAGCCCTGCTTAAATA-CTTTCCAGCTGTTCTGGTTCTT----AAGAAAGAAAAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742557 59 + 195804263 CTGACTAAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCTT----AAGAAAGAAAAAAAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779132 59 + 4876863 CTGACTAAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCTT----AAGAAGAAAAAAAAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664491 60 + 115148730 CTGACTAAACCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT----AAGAAATAAAAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948056 53 + 190429646 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCTT----------AAAAAAAAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895509 53 + 189454096 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT----------AAAAAAAAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273455 55 - 25927173 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT--------AAAAAAAAAAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312666 54 + 4669795 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCTT---------AAAAAGAAAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271861 54 + 135778131 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT---------AAAAAAAAAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709753 49 - 2847728 CTGACCGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGTTCCT--------------AAAAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831564 53 + 2368649 CTGACTGAGCCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT----------AAAAAAAAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583663 59 - 190850796 CTGACTGAGTCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTT----AAGAGAGAAAGAAAA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067579 55 - 14256875 ----CTGAGTCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTG----AAGAAAGAAAGAAAA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959229 59 - 2196201 CTGACTGAGTCCTGCTTAAACA-TTTTCCAGCTGTTCTGGCTCTG----AAGAAAGAAAGAAAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355436 63 - 5030052 CTGACTGAGTCCTGCTTAAATA-TTTTCCAGCTGTTCTGGCTCTTaagaaagaaagaaagaaaa- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477917 59 - 93316391 CTGGCTGAGCCCTGTTTAAATA-TTTTTCAGCTGTTCTGGCTCTT----AGGAAAGAAAAAAAA- i micMur3.chr14 C 0 I 3 s proCoq1.NW_012145301v1 3899217 58 + 3993831 CTGGCTGAGCCCTG-TTAAATA-TTTTTCAGCTGTTCTGGCTCTT----AAGAAAGAAAACAAA- i proCoq1.NW_012145301v1 C 0 I 18 s otoGar3.GL873580 11199470 49 - 11315646 CTGC-----------TTAAATATTTTTTCAGCTGCTCTGCCTCTT----AAGACAGAAAAACAC- i otoGar3.GL873580 C 0 I 4 s canFam3.chr16 16895179 57 - 59632846 CTGCCTAAGCCCTGCTTAGATA-TTTTTCAGCTGTTCTGACTCTT----AAAGAAAAAAGAA--- i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1404430 59 - 2520184 CTGGCTGAAGCCTGCTTACATA-TTTTTCAACTGCTCTGGCTTTA----AGGAAGAAAAGCATT- i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86532390 379 - 129401213 I a score=134608.000000 s hg38.chr4_KI270789v1_alt 67237 14 + 205944 ATAGATTCTTAAAA s panTro5.chr4 192858896 13 + 194502333 -TAGATTTTTAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742616 13 + 195804263 -TAGATTTTTAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779191 13 + 4876863 -TAGATTTGTAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664551 13 + 115148730 -TAGATTTTTAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948109 13 + 190429646 -TAGATTTTTAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895562 13 + 189454096 -TAGATTTTTAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273510 13 - 25927173 -TAGATTTTTAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312720 13 + 4669795 -TAGATTTTTAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271915 13 + 135778131 -TAGATTTTTAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709802 13 - 2847728 -TAGATTTTTAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831617 13 + 2368649 -TAGATTTTTAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583722 13 - 190850796 -AAAGATTTTCAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067634 13 - 14256875 -AAAGATTTTCAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959288 13 - 2196201 -AAAGATTTTCAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355499 13 - 5030052 -aaagaTTTTCAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477979 14 - 93316391 TTGGATTTTTAAAA i micMur3.chr14 I 3 C 0 s otoGar3.GL873580 11199523 14 - 11315646 TTAGGTTTTTAAAT i otoGar3.GL873580 I 4 C 0 s canFam3.chr16 16895238 13 - 59632846 TTATATTTTTAAA- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1404489 14 - 2520184 TCAGATTTTAAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3899275 18 + 3993831 I e mm10.chr8 86532390 379 - 129401213 I a score=15341.000000 s hg38.chr4_KI270789v1_alt 67251 2 + 205944 -ga s panTro5.chr4 192858909 2 + 194502333 -GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742629 2 + 195804263 -GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779204 2 + 4876863 -GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664564 2 + 115148730 -GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948122 2 + 190429646 -GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895575 2 + 189454096 -GA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273523 2 - 25927173 -GA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312733 2 + 4669795 -GA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271928 2 + 135778131 -GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709815 2 - 2847728 -GA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831630 2 + 2368649 -GA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583735 2 - 190850796 -GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067647 2 - 14256875 -GA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959301 2 - 2196201 -GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355512 2 - 5030052 -GA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477993 1 - 93316391 -T- i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11199537 2 - 11315646 -GA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532769 2 - 129401213 -GA i mm10.chr8 I 379 C 0 s canFam3.chr16 16895251 2 - 59632846 -GA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404503 2 - 2520184 AG- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3899275 18 + 3993831 I a score=1324029.000000 s hg38.chr4_KI270789v1_alt 67253 96 + 205944 -------gaattaactcatttattcttactc--tttattctctgtGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAGT-AATCACAG--GATACATC s panTro5.chr4 192858911 96 + 194502333 -------GAATTAACTCATTTATTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAGT-AATCACAG--GATACATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742631 96 + 195804263 -------GAATTAACTCATTTATTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAGT-AATCACAG--GATACATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779206 96 + 4876863 -------GAATTAACTCATTTATTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAGT-AATCACAG--GATACATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664566 98 + 115148730 -------GAATTAACTCATTTATTCTTGCCC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAGT-AATCACAGGAGATACATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948124 96 + 190429646 -------GAATTAACTCTTTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895577 96 + 189454096 -------GAATTAACTCTTTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273525 96 - 25927173 -------GAATTAACTCTTTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312735 96 + 4669795 -------GAATTAACTCTTTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134271930 96 + 135778131 -------GAATTAACTCTCTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCGAT-AACCACAG--GATACATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709817 96 - 2847728 -------GAATTAACTCTTTTTTTCTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CCTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831632 96 + 2368649 -------GAATTAACTCTTTTTTTTTTGCTC--TTTATTCTCTGTGTCTGAGGGGAGACCCTACCAA---CTTCCCATC-------TATGACTCCCAAT-AACCACAG--GATACGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583737 96 - 190850796 -------GAATGAGTGGCTTTATTTTTGCTC--TTTATTCTCTGTGTCTGAGAGGAGACCCTACCAA---CCTCCCATC-------TATGACTTCCAAT-AACCACAT--GATACATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067649 95 - 14256875 -------GAATTAGT-GCCTTATTTTCGCTC--TTTATTCTCCGTGTCTGAGGGGAGACCCTACCGA---CCTCCCACC-------TATGACTTCCAAT-AACCACAT--GATACTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959303 95 - 2196201 -------GAATTAGTGCCTTTATTTTTGCTC--TTTATTCTC-GTGTCTGAGGGGAGACCCTACCGA---CCTCCCATC-------CATGACTTCCAAT-AACCACAT--GATACTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355514 96 - 5030052 -------GAATTAGTGCCTTTATTTTTGCTC--TTTATTCTCCGTGTCTGAGGGGAGACCCTACCGA---CCTCCCATC-------TATGACTTCCAAT-AATCACAT--GATACATC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17477994 95 - 93316391 -------GACTTAGCTTATTTAGTCTTGCTC---TTTTTCTCCATATCTAAGGGGAGACCCTACAAA---CGTCTCGTC-------TGTGACTACCAAT-AACCGCAT--GATACATC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3899293 97 + 3993831 -------GACTTAACTTATTTAGTCTTGCTC--TTTTTTCTCCATATCTAAGGGGAGACCTTACAAA---CGTCCCGTC-------TGTGACTTCCAATAAACCGCAT--GATACATC i proCoq1.NW_012145301v1 I 18 C 0 s otoGar3.GL873580 11199539 88 - 11315646 ---------ATTAGCTTATTTTTTCT--------GTTTTCTCCATATGTAAGGGGGGACCCTATAAA---CTTCCCTTC-------TATGACTATCAAT-AATCACAA--AATGCATC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532771 91 - 129401213 -------AAATGAACTCATTTATTCTTCCTG--TTCACTCTCCATTAATGAGGGTA-ACCTCACAAA---TCAGCCATG-------TGTGGTTCCCAAG-AATCACAT--GAGA---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16895253 101 - 59632846 -------GAATTAGCTCATTTTTTTTTTTCCAGTTTACTTCCCATACCAGAAGAGAAAAAGCACAAAACTTCTCTCATC-------TACAGCTCCAAAT-AGCCACAT--GATAGGtc i canFam3.chr16 C 0 I 8811 s dasNov3.JH570353 1404505 109 - 2520184 GGTCATttcatttattcatttatttattttg--tttattttccatatatttGGAGAAACTCCACAAA---TCTCCCATCTGATCCATGTGGAT-CAAAT-ATTCACAT--GATACATC i dasNov3.JH570353 C 0 C 0 a score=193135.000000 s hg38.chr4_KI270789v1_alt 67349 21 + 205944 ATTGTCT-----------------------------------------GGGAAGAGAGGGA-G s panTro5.chr4 192859007 21 + 194502333 ATTGTCT-----------------------------------------GGGAAGAGAGGGA-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742727 21 + 195804263 ATTGTCT-----------------------------------------GGGAAGAGAGGGA-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779302 21 + 4876863 ATTGTCT-----------------------------------------GGGAAGAGAGGGA-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664664 21 + 115148730 ATTGTCT-----------------------------------------AGGAAGAGTGGGA-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948220 21 + 190429646 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895673 21 + 189454096 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273621 21 - 25927173 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312831 21 + 4669795 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272026 21 + 135778131 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709913 21 - 2847728 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831728 21 + 2368649 ATTATCT-----------------------------------------AGGAAGAGAGGGA-G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583833 62 - 190850796 ATTGTCTAGGAAGAGAGGGAGAGGGCCACGGGCGTTACATCATTGTCTAGGAAGAGAGGGA-G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067744 20 - 14256875 ATTGTCT------------------------------------------GGAAGACAGGGA-A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959398 21 - 2196201 ATTGTCT-----------------------------------------AGGAAGACAGGGA-G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355610 21 - 5030052 ATTGTCT-----------------------------------------AGGAAGAGACGGA-G i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17478089 21 - 93316391 ATTGTCT-----------------------------------------AGAAAGAAAGAGAG- i micMur3.chr14 C 0 I 766 s proCoq1.NW_012145301v1 3899390 20 + 3993831 ATTGTCT-----------------------------------------AGGAAGGGAGGAG-- i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11199627 20 - 11315646 ATTGTCT-----------------------------------------AAGGAGGGAAGAG-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532862 11 - 129401213 ------------------------------------------------AGGCAGCAGAG---- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1404614 21 - 2520184 ATTATAT-----------------------------------------CTCAAAAAGAGGA-A i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16895354 8811 - 59632846 I a score=203983.000000 s hg38.chr4_KI270789v1_alt 67370 18 + 205944 AGGGCC--------ACAGGCTTGGCA s panTro5.chr4 192859028 18 + 194502333 AGGGCT--------ACAGGCTTGGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742748 18 + 195804263 AGGGCC--------ACAGGCTTGGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779323 18 + 4876863 AGGGCC--------ACAGGCTTGGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664685 18 + 115148730 AGGGCC--------ACAGGCTTGGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948241 18 + 190429646 AGGGCC--------ACAGGCTTGGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895694 18 + 189454096 AGGGCC--------ACAGGCTTGGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273642 18 - 25927173 AGGGCC--------ACAGGCTTGGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312852 18 + 4669795 AGGGCC--------ACAGGCTTGGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272047 18 + 135778131 AGGGCC--------ACAGGCTTGGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709934 18 - 2847728 AGGGCC--------ACAGGCTTGGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831749 18 + 2368649 AGGGTC--------ACAGGCTTGGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583895 17 - 190850796 AGGGCC--------ACGGGCGTGGT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067764 18 - 14256875 TGGGCC--------ACTGGCCTGGCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959419 18 - 2196201 AGGGCC--------ACAGGCCTGGCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355631 18 - 5030052 AGGGCC--------ACAGGCCTGGCA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3899410 18 + 3993831 AGGGCT--------GTAGGCTCAGCA i proCoq1.NW_012145301v1 C 0 I 236 s otoGar3.GL873580 11199647 18 - 11315646 AAGGCC--------GTAGACTCGGCA i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86532873 12 - 129401213 AAATTC--------AGAAGA------ i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1404635 26 - 2520184 GGGGTCGAGTGCTTAGAGACATGGCA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17478110 766 - 93316391 I e canFam3.chr16 16895354 8811 - 59632846 I a score=698673.000000 s hg38.chr4_KI270789v1_alt 67388 76 + 205944 AAGTCCGAACTTCCGGTCTTCCTGCT----------------TTCCAATATCCCCAGGCTTCTGGCCTTGTACACGG--TTAACGTG---TT-------TCAGC s panTro5.chr4 192859046 76 + 194502333 AAGTCCGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCCAGGCTTCTGGCCTTGTACACGG--TTAACGTG---TT-------TCAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742766 76 + 195804263 AAGTCCGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCCAGGCTTCTGGCCTTGTACACGG--TTAACGTG---TT-------TCAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779341 76 + 4876863 AAGTCCGAACTTCCAGGCTTCCTGCT----------------TTCCAATATCCCCGGGCTTCTGGCCTTGTACACGG--TTAACGTG---TT-------TCAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664703 76 + 115148730 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTGTACACAG--TTAACGTG---TT-------TCAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948259 76 + 190429646 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTTCACACAG--TTAACACG---TT-------TCCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895712 76 + 189454096 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTTCACACAG--TTAACACG---TT-------TCCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273660 76 - 25927173 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTTCACACAG--TTAACACT---TT-------TCCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312870 76 + 4669795 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTTCACACAG--TTAACACG---TT-------TCCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272065 76 + 135778131 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAATATCCCTGGGCTTCTGGCCTTGCACACAG--TTAACGTG---TT-------TCCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2709952 76 - 2847728 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TTCCAGTATCCCTGGGCTTCTGGCCTTGCACACAG--TTAAAATG---TT-------TCCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831767 76 + 2368649 AAGTCAGAACTTCCAGTCTTCCTGCT----------------TCCCAATATCCCTGGGCTTCTGGCCTTGCTCACAG--TTAACGTG---CT-------TCGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583912 77 - 190850796 -GGTCAGCACTTGCAGTCTTCCTGCT----------------TTGCAGTATCCCTGGGCTTCTGGCCTTGTGCACAGCCTTACTGTG---TT-------TCAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067782 78 - 14256875 GAGTCAGGACTTGTAGTCTTCCTGCT----------------TTGCAATATCCCTGGGCTTCTGACCTTGTACACAGCCTTACTGTG---TT-------TCAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959437 78 - 2196201 GAGTCCAGACTTGCAGTCTTCCTGCT----------------TTGCAATATCCCTGGGCTTCTGGCCTCGTACACGGCCTTACTGTG---TT-------TCAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355649 78 - 5030052 GAGTCAGGACTTGCAGTCTTCCTGCT----------------TTGCTATATCCCTGGGCTTCCGGCCTTGTACACAGCCTTACTGTG---TT-------TCAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11199666 81 - 11315646 AAACGGGGACTTCTGGTTTCCCAGTT----------------CCCCAGTATTCCCAGGCTTTAGCTCTTATTCACAGCCTGGAAGTAAGTAT-------TCCCT i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86532885 71 - 129401213 AATCGGGAATGTCTAG--TTCCCATT----------------TCCCAGTACTTCAAGGAATCA----------ACAC--TTGAAGTT---TTTAAGTAGTCAGA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1404661 87 - 2520184 -------GAAATCAATTATTTCTGTTTATACATGAAAACTTCTTCCAATATTTTTAGGCATCAACCCCTGTATACATTCTGGAAGTG---TT-------TCAGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3899428 236 + 3993831 I e micMur3.chr14 17478110 766 - 93316391 I e canFam3.chr16 16895354 8811 - 59632846 I a score=832519.000000 s hg38.chr4_KI270789v1_alt 67464 82 + 205944 TAGTGCTGAGTGTTGCATTCTGCCCCTTCAACCAGATCA-C-TTCCGCTGAAAGTTTGCATCTCCCAGTATCAGTGTTGGGGAA s panTro5.chr4 192859122 82 + 194502333 TAGTGCTGAGTGTTGCATTCTGCCCCTTCAACCAGATCA-C-TTCCGCTGAAAGTTTGCATCTCCCAGTATCAGTGTTGGGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742842 82 + 195804263 TAGTGCTGAGTGTTGCATTCTGCCCCTTCAACCAGATCA-C-TTCCGCTGAAAGTTTGCATCTCCCAGTATCAGTGTTGGGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779417 82 + 4876863 TAGTGCTGAGTTTTGCATTCTGCCCCTTCAACCAGATCA-C-TTCCGCTGAAAGTTTGCATCTCCCAATATCAGCGTTGGGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664779 82 + 115148730 TAGTGCTGAGTATTGCATTCTGCCCCTTCAACCAGATCA-C-TTCTGCTGAAAGTTTGCATCTCCCAATATCAGCGTTGAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948335 82 + 190429646 TAGTGCTGAGTATTGCATTCTGCCCCTTCAACGAGATCA-C-TTTCACTAAAAGTTTGCATCTCCCAATATCAGAGATGAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895788 82 + 189454096 TAGTGCTGAGTATTGCATTCTGCCCTTCCAACCAGATCA-C-TTTCACTAAAAGTTTTCATCTCCCAATATCAGCAATGAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273736 82 - 25927173 TAGTGCTGAGTATTGCATTCTGCCCTTTCAACCAGATCA-C-TTTCACTAAAAGTTTTCATCTCCCAATATCAGCAATGAGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3312946 82 + 4669795 TAGTGCTGAGTATTGCATTCTGCCCCTTCAACCAGATCA-C-TTTCACTAAAAGTTTGCATCTCCCAGTATCAGCGATGAGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272141 82 + 135778131 TAGTGCTGAGTATTGCATTCTGCCCCTTCAATCAGATCA-C-TTTCACTAAAAGTTTGCATCTCCCAATATCAGCGATGAGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710028 82 - 2847728 TAGTGCTGAGTATTGCATTCTGCCCCTTCAACCAGATCA-C-TTTCACTAAACGTTTGCATCTCCCAATATCAGCGATGAGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831843 82 + 2368649 TAGTGCTGAGTATCGCATTCTGCCCCTTCAACCAGATCA-C-TTTCACTAAAAGTTTGCATCTCCCAATATCAGCGATGAGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189583989 77 - 190850796 TAGTACTGAGGACTGCGCTCTACCCTT-----CAAATCA-C-TTCCACCGAAAGTTTGGATCTCCCAATTTCAGTGTTTAGGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067860 77 - 14256875 CAGTATTGAGGACTGTATTCTACCCTT-----CAAATCA-C-TTCCACTAAAAGTTTGGATCTCCCAACTTCAGTGTTTAGGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959515 77 - 2196201 TGGTGCTGAGGACTGCATTCTACCCTT-----CAGATCA-T-TTCCACTAAAAGTTTGGATCTCTCAATTTCAGTGTTTAGGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355727 77 - 5030052 TAGTACTGAGGACTGCATTCTACCCTT-----CAAATGA-C-TTCCACTAAAAGTTTGGATCTCCTAATTTCGGTGTTTAGGAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11199747 82 - 11315646 TGGGGTTAAATATTG-GCTCTGCCTGATCAGCTAGATGAGA-TTTCATTAGAAGTTTGCTTCCTTTGATTTTAATGTTTTGGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86532956 79 - 129401213 TAGCCTTGAAGATCAGATCATAACTCATAAATTAGTCAT-A-TTCCATTACAAA-ATGCATCTTTCA--TTCAAGGTTCAGGAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16904165 83 - 59632846 TAGTGCTAAATATTGGGTTCTGACCTCTCAACTAGATCC-TATTTCACTAAAAGATTGCATCTTCTGACTTCAATATCTAGGAC i canFam3.chr16 I 8811 C 0 s dasNov3.JH570353 1404748 83 - 2520184 TAATGCTGAATATTGGATACTGGCCTATCAACTAGATCA-TATTCTACTAAAAGGCTGCATCTTCTGATTGCAAAGGTTAGGTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3899428 236 + 3993831 I e micMur3.chr14 17478110 766 - 93316391 I a score=1029913.000000 s hg38.chr4_KI270789v1_alt 67546 78 + 205944 GCCAAATGAAATCT---ATCAATCCCAGTTCAGAATGTAAAGAAACTGAAGATC--CTCTTTCCCCATAT-GGATTATTAT---ATC s panTro5.chr4 192859204 78 + 194502333 GCCAAATGAAATCT---ATCAATCCCAGTTCAGAATGTAAAGAAACTGAAGATC--CTCTTTCCCCAGAT-GGATTATTAT---ATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192742924 78 + 195804263 GCCAAATGAAATCT---ATCAATCCCAGTTCAGAATGTAAAGAAACTGAAGATC--CTCTTTCCCCAGAT-GGATTATTAT---ATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779499 78 + 4876863 GCCAAGTGAAATCT---ATCAATCCCTGTTCAGAATGTAAAGAAATTGAAGATC--CTCTTTCCCCAGAT-GGATTATTAT---ATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664861 78 + 115148730 GCCAAGTGAAATCT---ATCAATCCCTGTTCAGAATGTAATGAAATTGAAGATC--TTCTTTCCCCAGAT-GGATTATTAT---ATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948417 79 + 190429646 ACCAAGTGAAATCT---ATCAATCCGTGTTTAGAATGGAATGAAACTGAAGATC--CTGTTTCCCCAGAT-GGATTATTACA--ATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895870 79 + 189454096 ACCAAGTGAAATCT---ATCAATCCGTGTTTAGAATGGAATGAAACTGAAGATC--CTGTTTCCCCAGAT-GGATTATTACA--ATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273818 79 - 25927173 ACCAAGTGAAATCT---ATCAATCCGTGTTTAGAATGGAATGAAACTGAAGATC--CTGTTTCCCCAGAT-GGATTATTACA--ATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313028 79 + 4669795 ACCAAGTGAAATCT---ATCAATCTGTGTTCAGAATGGAATGAAACTGAAGATC--CCGATTCCCCAGAT-GGATTATTACA--ATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272223 79 + 135778131 ACCAAGTGAAATCT---ATCAATCCGTGTTCAGAATGGAATGAAACTGAAGATC--CTGTTTCCCCAGAT-GGATTATTACA--ATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710110 82 - 2847728 ACCAAGTGAAATCTATCATCAATCTGTGTTCAGAATGGAATGAAACTGAAGATC--CCGATTCCCCAGAT-GGATTATTACA--ATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 831925 79 + 2368649 ACCAAGTGAAATCT---ATCAATCCGTGTTCAGAATGGAATGAAACTGAAGATC--CTGTTTCCCCAGAT-GGATTATTACA--ATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584066 79 - 190850796 GCCAAGTGAAATCT---ATGAACCCCTGTTCAGAATGTAATGAAATTGAAGATC--CTCTTTCCGCAGAT-GGATTATTATA--ATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13067937 79 - 14256875 GCCAAGTGAAATCT---ATGAACCCCTGTTCAGAATGTAATGAAATTGAAGATC--CTCTTTCCCCAGAT-GGATTATTATA--ATC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959592 79 - 2196201 GCCAAGCGAAATCT---ATGAATCCCTGTTCAGAATGTAATGAAATTGAAGATC--CTCTTTCCCCAGAC-GGATTATTATA--ATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355804 79 - 5030052 GCCAAGTAAAATCT---ATGCATCCCTGTTCAGAATGTAATGAAACTGAAGACC--CTCTTTCCCCAGAT-GGATTATTATA--ATC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17478876 76 - 93316391 GCCAAGTGAAGTCT---ATGAATCCCTGTTCAGAATGTAATAAAATTGAAGATA--ATCTTTTCTCAGAT-GGATTATCACA----- i micMur3.chr14 I 766 C 0 s otoGar3.GL873580 11199829 77 - 11315646 GCCAAGTGAA-TCT---ATACATCCCTGCTCAGAATGTAATAAAACTGAAGATA--ATCTTTTCCCAGAT-GGATGATCACAGC--- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86533035 81 - 129401213 GTCACATGAAATTT---TAAAGTCCTCAGAGAGAATGTGATGAAATCAAAGATCATCTTTTTTCTTAGAG-AGATCATCAAA--ACT i mm10.chr8 C 0 I 3 s canFam3.chr16 16904248 80 - 59632846 TCTAAGTAAAATCT---ATAAATCGCTGTTTAGAATGTAATAAAATTGAAGATG--ATCTTTTCCCAAGTGGGATCATCATG--ATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404831 76 - 2520184 GCCTAGTGAAACCT---ATAAATTCCTACTCAGAATGTAATAAAATTGAAGATC--ATCTTTTCCCAAAT-GAATCATTATG----- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3899428 236 + 3993831 I a score=671366.000000 s hg38.chr4_KI270789v1_alt 67624 53 + 205944 ATCATAGCATTTGGAGAAGCC-AAGATCAACAAAAAAGCAGTTAGCAGGTAT----GC------ s panTro5.chr4 192859282 53 + 194502333 ATCATAGCATTTGGAGAAGCC-AAGATCAACAAAAAAGCAGTTAGCAAGTAT----GC------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743002 53 + 195804263 ATCATAGCATTTGGAGAAGCC-AAGATCAACAAAAAAGCAGTTAGCAAGTAT----GC------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779577 53 + 4876863 ATCATAGCATTTGGAGAAGCC-AAGATCAACAAAAAAGCAGTTAGCAGGTAT----GC------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664939 53 + 115148730 ATCATAGCATTTGGAGAAGCC-AAGATCAACAAAAAAGCAGTTAGCAGGTGT----GC------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948496 52 + 190429646 ATCATAGCATTTGAAGAAGCC-AAGATCAAC-AAAAAAGAGTTACCAGGTGT----GC------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187895949 53 + 189454096 ATCATAGCATTTGAAGAAGCC-AAGATCAACAAAAAAAGAGTTACCAGGTGT----GC------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273897 53 - 25927173 ATCATAGCATTTGAAGAAGCC-AAGATCAACAAAAAAAGAGTTACCAGGTGT----GC------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313107 53 + 4669795 ATCATAGCATTTGAAGAAGCC-AAGATCAACAAAAAAAGAGTTACCAGGTGT----GC------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272302 53 + 135778131 ATCATAGCATTTGAAGAAGCC-AAGATCAACAAAAAAAGAGTTACCAGGTGT----GC------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710192 53 - 2847728 ATCATAGCATTTGAAGAAGCC-AAGATCAACAAAAAAAGAGTTACCAGGTGT----GC------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832004 53 + 2368649 ATCATAGCATTTGAAGAAGCC-AAGACCAATAAAAAAAGAGTTACCAGGTGT----GC------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584145 52 - 190850796 ACCGCAGCATTTGGAGAAGCC-CAGATCAACAGAAGAGCAGTGAGCA-ATGT----GC------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068016 53 - 14256875 ATCACAGCATTTGGAGAAGCC-AAGATCAACAGAAGAGCAGTTAGCAGATGT----GT------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959671 53 - 2196201 ATCATAGCATTTGGAGAAGCC-AAGATCAACAGAAGAGCAGTTAGCAGATGT----GC------ i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3355883 53 - 5030052 ATCACAGCATCTGGAGAAGCC-GAGATCAACAGAAGAGCAGTTAGCAGATGT----GC------ i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17478952 50 - 93316391 ATCATAACATTTGGAGAAGCCAAAGATCAACATAAAAACAATTAACAA--------GT------ i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3899664 58 + 3993831 ATCATAGCATTTGGAGAAGACAAAGATCAACATAAAAGCAATTAACAAGTATCTGCGT------ i proCoq1.NW_012145301v1 I 236 C 0 s otoGar3.GL873580 11199906 43 - 11315646 -------CATTTGGAGAAGCCAAAGATCAACATGAAAGCAATTAACAG--------GT------ i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86533119 50 - 129401213 ATCA----AGTTGGAGGAGTTGACCATCAATCTGAAAACAACGTGTGGGAAT----gc------ i mm10.chr8 I 3 I 1408 s canFam3.chr16 16904328 50 - 59632846 ATCATGGTAATTGGAGAAATT-AA-ATAGAAATGAAAACAATTAATAGGTGT------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1404907 60 - 2520184 ATCATAACATTTGGAGATGCCAAAGATCAAAATAAAAGCAATCAGTAGTTGT----GTGTATGT i dasNov3.JH570353 C 0 C 0 a score=6213132.000000 s hg38.chr4_KI270789v1_alt 67677 464 + 205944 ATGTGTGTGTGCTATTTGAACATTACACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTGAAAAACTTTTCCTCCCTCAAGACAAAAAGAA--GTATAGCTCATTTCATTTTAGGATATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATAGAATATTCTTTC-------AATTGTTAATTTCTCCAAGAAAGTTCAGCTCTCTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATCCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAACAATACATTGAAAATTTGGAA-----------GTGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--CTGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTGGAGTATG--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- s panTro5.chr4 192859335 464 + 194502333 ATGTGTGTGTGCTATTTGAACATTACACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTGAAAAACTTTTCCTCCCTCAAGACAAAAAGAA--GTATAGCTCATTTCATTTTAGGATATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATAGAATATTCTTTC-------AATTGTTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATCCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAACAATACATTGAAAATTTGGAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--CTGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTGGAGTATG--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743055 464 + 195804263 ATGTGTGTGTGCTATTTGAACATTACACAT-AGTAATTTTTCAGAAAAGATTTTCATCTCTGAAAAACTTTTCCTCCCTCAAGACAAAAAGAA--GTATAGCTCATTTCATTTTAGGATATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATAGAATATTCTTTC-------AATTGTTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATCCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAACAATACATTGAAAATTTGGAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--CTGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTGGAGTATG--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3779630 461 + 4876863 ATGTGTGTGTGCAATTTGAACATTACACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTGAAAAACTTTTCCTCCCTCAAGACGAAAAGAA--GTATAGCTCATTTCATTTTAGGATATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATAGAATATTCTTTC-------AATTGTTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATCCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAACAATACACTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATA---ACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--CTGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTGGAGTATG--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112664992 464 + 115148730 ATGTGTGTGTGCTATTTGAACATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTGAAAAACTTTT----CCTCAAGACAAAAAGAA--GTATAGCACATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGCATTTTTAAATTAGACATATG-TTTGATAGAATATTCCTTC-------AATTGTTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATCCTTATACTTGTTTGTCTTCAGTGCATTCATGT-TTTAAAATAATACATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAGTAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--CTGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTATTTGTATTTAGAGTACA--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188948548 459 + 190429646 ATGTGTGTGTGCTATTTGAATATTAGACAT-AGTAGTTTTTCAGAAAAGAT-----TCTCTAAAAAGCGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAAACATATC-TTTGATACAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTTTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAGCAATACATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTAGAGTACG--CACACTTATCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896002 464 + 189454096 ATGTGTGTGTGCTATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAGCGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGTATTTTAAAATTAAACATATC-TTTGATACAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAGCAATACATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTAGAGTACG--CACACTTATCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24273950 464 - 25927173 ATGTGTGTGTGCTATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAGCGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGTATTTTAAAATTAAACATATC-TTTGATACAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAGCAATACATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCGTGTTCTGATTTGATATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTAGAGTACG--CACAGTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313160 463 + 4669795 ATGTGTGTGTGCTATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAGTGTTTCCTCCCTCAAGATAAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATGCAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGGGCATTCATGT-TTTAAAGCAATACATTG-GAATTTGAAA-----------ATGTTTTTACTTCAAATAAGTACATTGGCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTTGTATTTAGAGTACG--CACACTTGTCTG----------------------AGACAGTTCTCTTTCTCACA---GT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272355 464 + 135778131 GTGTGTGTGTGCTATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAACGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTCAGCACTTTAAAATTAGACATATC-TTTGATACAATATTCCTTT-------GATTGTTAACTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAGCAATACATTGAAAATTTGAAA-----------TTGTTTTTGCTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--ATGATTTCTGTTGGTAGTCTTGGATGTTTTCTGTACTTGTATTTAGAGTATG--CACACTTGCCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710245 464 - 2847728 ATGTGTGTGTGCTATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAGCGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACGTAATCT-GTCTTTGGGCTTCAGCATTTTAAAATTAGACATATC-TTTGATATAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAT--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGGGCATTCATGT-TTTAAAGCAATACATTGCAAATTTGAAA-----------ATGTTTTTACTTCAAATAAGTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCGTGTTCTGATTTGCTATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCCGTACTTGTATTTAGAGTATG--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832057 461 + 2368649 ATGTGTGTG---TATTTGAATATTAGACAT-AGTAATTTTTCAGAAAAGATTCTCATCTCTAAAAAATGTTTCCTCCCTCAAGATGAAAAGAA--GTATAGCTCATTTCATTTTAGGACATAATCT-GTCTTTGGGCTTTAGCATTTTAAAATTAGACATATC-TTTGATACAATATTCCTTC-------GATTGTTAATTTCTCCAGAAAAGTTCAGCTCTTTGGAATCAGATTGA--------GAA--------------TTTTTGTTAAATGCTTATA----TTTGTCTTCAGTGCATTCATGT-TTTAAAGCAATACATTGAAAATTTGGAA-----------ATGTTTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGTTGCAGTGTTCCATGTTCTGATTTGATATTTTTC--ATGATTTCTGTTAGTAGTCTTGGATGTTTTCTGTACTCGTATTTAGAGTACA--CACACTTGTCTG----------------------AGACAGTTCTATTTCTCACA---GT--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584197 458 - 190850796 ACGTGTGTG-----TTTGAAGATTAGACAC-GGTAATTTTTCAGAAAGAATTCTCATCTCTGAAAAACTTTTCCAGTCTCAAGATTAAAAGAG--GTATAGCTCATTCCATTTTAGGACATAATCT-GTCTTTGGACCTCAGCATTTTAAAATTAGAAATATC-TTTGATGGAATATTCCTTT-------GATTATTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTAACTGA---CGTG--------------ATTTTGTTAAATTCTTACA----TTTGTCTTCAG------TGTGT-TTTAAAACAACACATTGAAAATTAGAAA-----------ATGTTTTTACTTCAAGTAACTACATTGTCTTTTTCTAAAATGAGAAGTCGCAGTGTCCCATGTTCTGATTTGGTGTTTTTC--CTCGTTTCTGTTAGTAGTCTGGGATGTTTTCTGTCCTTGCGTGTAGATTACA--CACACTTGTCTG----------------------GGACAGTTTTATTTCTCACA---GT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068069 467 - 14256875 ATGTGTGTG---TATTTGAACATTCGACAT-AGTAATTTTTCAGAAAGGATTCTCATCTCCGAAAAACTTTTCCAGTCTCAAGATTAAAAGAA--GTATAGCTCATTCCATTTTAGGACGTAATCT-GTCTTTGGACCTCAGCATTTTAAAATTAGAAATATC-TTTGATGGAATATTCCTTC-------GATTGTTAATTTCGCCAGGAAAGTTCAGCTCTTTGGAATCAGATTAACTGA---CATT--------------ATTTTGTTAAATTCTTACA----TTTGTCTTCAGCACGTTCATGT-TTTAAAACACCGCATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATAACGACATTGTCTTTTTCTAAAATGAGACGTCGCAGTGTTTCGTGTTCTGATTT-GTGTTTCTC--CTCATTTCTGTTAGTAGTCAGGGATGTTGTCTGTACGTGCATTTGGATTACA--CACACTTGTCTG----------------------GGAGAG-TGTATTTCTCACAGTTGT--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 959724 466 - 2196201 ATGTGTGTG---TGTTTGAACATTAGACAT-AGTAACTTTTCAGAAAGGATTCTCATCTCTGAAAAAGTTCTCCAGTCTCAAGATTAAAAGAA--GTATAGCTCATTCCATTTTAGGACATAATCT-GTCTTTGGACATCAGCATTTAAAAATTAAAAATATC-TTTGATGGAATATTCCTTC-------CATTGTTAATTTCTCCAAGAAAGTTCAACTCTTTGGAATCAGGTTAACGGA---CATT--------------ATTTTGTTAAATTCTTACG----TTTGTCTTCAGTGCATTCACGT-TTTAAAACAACGCACTGAAAATTTGAAA-----------ATGTCTTTACTTCAAATAACTACATTGTCTTTTTCTAAAATGAGAAGCCGCAGTGTTCCATGTTCTGATTTGGTGTCTTTC--CTCATTTCTGTTAGCAGTCTGGGATGTTTTCTGTACTTGCATTTAGATGACG--CACACTTGTCTG----------------------GGATGGTTTTATTTCTCACA---GT--- i cebCap1.NW_016107886v1 C 0 I 48 s aotNan1.NW_018492112v1 3355936 466 - 5030052 ATGTGTGTG---CATTTGAACATTAGACTT-AGTAATTTCTCAGAAAGGATTCTCATCTCTGGAAAACTTTTCCAGTCTCAAGATTAAAAGAA--CCATAGCTCATTCCATTTTAGGACGTAATCT-GTCTTGGGACCTCAGCATTTTAAAATTAGAAATATC-TTTGATGGAATATTCCTTT-------GATTGTTAATTTCTCCAAGAAAGTTCAGCTCTTTGGAATCAGATTAACTGA---CATT--------------ATTTTGTTAAATTCTTACA----TTTGTCTTCAGTGTGTTCACAT-TTTAAAACAATGCATTGAAAATTTGAAA-----------ATGTTTTTACTTCAAATAACTACATTATCTTTTTCTAAAATGAGAAGTCACAGTGTTCCGTGTTCTGATTTGGTGTCTTTC--CTCATTTCTGTTAGTAGTCTGGGATGTTTTCTGTACTTGCATTTAGATTATG--CACACTTGTCTG----------------------GGACAGTTTTATTTCTCACA---GT--- i aotNan1.NW_018492112v1 C 0 I 40 s micMur3.chr14 17479002 473 - 93316391 GTGTGTGTGTGTTAATTGAACATTAGATATAAGTAATTTTTCAGAAAGGATTCTCATTTCTAGAAAATTTTTCCTCCCTCAAGATTAAAAGAG--GTACAGCTCATTTCTTTCTAGGACA--------TAATTTGTCTTTGACATTTTTAAATTAGAAATATA-TTTAAGAAAATATTTCTTC-------AATTGTTATTTTCTCCAAGAAGTTTCTGCTCTTTGGAATCAGATTAACTAA---TGATTTTTGTTG---TTGTTCTTGTCAAATCCTTATA----TTTGTCTTTGGTACATCCATGT-TTTAAAA-AACA-ATTTGAAATTTGAAA-----------ATGTATTTATTTCAAATAACTAAGTTGCCTTTTTCTAAAATGAAAAGTTGTTGTTTTCCATGCTATGACTCAATGGTTTTT-GCTGATTTCTGTTAGTAGTCTTGGCTATTTTCTGTACCTGTACCTAGTACACA--CACACTTGTCTG----------------------GGACAGTTCTATTTTTCACA---GT--- i micMur3.chr14 C 0 I 3 s proCoq1.NW_012145301v1 3899722 480 + 3993831 GCGTGTGTGTATTAATTGAACATTAGATATAAGTAATTTGTTAGAAAGGATTTTCATCTCTGGAAAACTTTTCCTTCCTCTAGATTAAAAGAG--GTACAACTAATTTCCTTTTAGGACA---TTT-GTCTTTGGGCTTTGGTATTTTTAAATTTGAAATACC-TTTAAGAAAATATTTCTTC-------AATTGTTAGTTTCTCCAAGAGAGTTCTGCTCTTTAGAATCAGATTAACTAA---TGAtttttgttgttattgttgttgttAAATCCTTATA----TTTGTCTTTGGTGCAACCATGT-TTTAAAA-AAAG-ATTCGAAATTTGAAA-----------ATATATTTACTTCAAATAACTAAGTTGCCTTTTTCTAAAATGAAAACTTGTTGTGTTCCATGCTATGACTTGCTGTTTTTT-GCTGATTTCTGTTAGTCGTCTTGGCTATTTTCTGTACCTGTACCTAGTACATA--CATACTTGTCTG----------------------GGATGGTTCTATTTTTCACA---GT--- i proCoq1.NW_012145301v1 C 0 I 3 s otoGar3.GL873580 11199949 471 - 11315646 GTGTGTGTG----AACTGAGCATGTGATATAAGTCATTTTTCAGAAAAGATTCTCATCTCTGAAAAACTTTTCCTCTTTCAAGATTAAAAGAGATATATAGCTCATTTCCTTCTAGGTCGTAATCT-GTCTTTGAGCTCTGGCATTTTAAAATTAGAAAGACC--TTAAGGAAATATTTCTTT-------GATTGTTAGATTTTCCAAGAAAGTTCTACTCTTTGGAATCAGGTTACCTAA---TGAT--------------TTGTTGTGAAATTCTTATG----TTTATCTTTGGTGCATTCATGTGTTTAAAA-AACATATTTCAAACATGAAA-----------ATGTAGCTACTTCCAATAAGTAAGTTGCATTTTTCTAAGATGAAAAGTTGTTGAGTTTTATGTTGTAACTTGATGTTTTTCGGCTGAGTTCTCTCAGTAGTCTTGGGTGTTTTCTGCACTTGTACCTAGTACACACGCACACTTGTCTG----------------------GGACAGTTCTATTTTTCACG---GT--- i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16904378 485 - 59632846 -TGTATGTT---TAATTGAACATTGGGTAT-GTCATTTTTCAAAAAAGGATTCTTATTTATGAAAA-TTTTTTCTCCTTCAAGATTGAAAGAA--GTATAACTCATTTCTTTTTAGAATATAACCTCATATTTGGTC-------TTTTAAAATTATAAATAGCTTTTCAAAAAATACTCATTTTTAAAAAAATTTTCAGTTTCTCAAAGAAAATTCTGCTCTTTGGAGTCAGATTAACTGATTCTATT--------------TTTTTTTTAAGTCTTTATA----TTTGTTTTTGGTGTATCTGTGt-ttttaacaaatatatattaaaattaaaa-----------atatattta----aGACAATTAGATTATC-TTTACCAAATTAAATAGTTGCTATTTTCCATGTTCTCATTAAATGTTTTGT---TCATTTCTTTGTTGGGTCTTAGATATTTTGTATAATTATACTTAGGATACA--CAGACTTGTCCAACTTGTCTGTCCAGACAAATCCAGATAGTTATATTTTTCACA---AT--- i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1404967 450 - 2520184 GTGCATGTGTTTTAAATGAGCATTAGCCAT--GTCATTTTTCAGAGAATATTCTCATCTCTGGAAAGCTTTTCATCTCTCAGGATTAAAATTG--GTA---------------TAGGGTATAAT---GTCTTTTGACTTTGGCATCTTAAAA-TAAATGGGCC-TTTTAAAAAATATTCTCTT----------TCATAATGTCTCCAAGGTAATTATGTTCTTTGGAATCAGGTTAACTGA---TAAA--------------TTTTTGTTAAATCTTTATA----TTTTTCTTTGGTACTTCCATAT-TTTAAAA-AGCATATTTAAAA--TGAAatatatatatatatatatatatGTTAAATA--CACATC----TTTTCAGCAATGCAGAATTGCTGTGTTCCATGTTCTGA-TCACTGTTTTTG--TTGACTTTT-TTAGGAGTCTTGGATATTTTCTGTACCTGCACCTGGTGTATT--CTGACTTGTCTG----------------------GGAAAGTTGTATTTTTCACA---GCTGT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86533169 1408 - 129401213 I a score=209594.000000 s hg38.chr4_KI270789v1_alt 68141 21 + 205944 CTTCACTGTGCCACATATTTG s panTro5.chr4 192859799 21 + 194502333 CTTCACTGTGCCACATATTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743519 21 + 195804263 CTTCACTGTGCCACATATTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780091 21 + 4876863 CTTCACTGTGCCACATATTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665456 21 + 115148730 CGTCACTGTGCCACATATTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949007 20 + 190429646 CATCACTGTGCCACATG-TTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896466 20 + 189454096 CATCACTGTGCCACATG-TTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274414 20 - 25927173 CATCACTGTGCCACATG-TTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313623 20 + 4669795 CATCACTGTGCCACATG-TTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272819 20 + 135778131 CATCACTGTGCCATATA-TTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710709 20 - 2847728 CATCACTGTGCCACATG-TTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832518 20 + 2368649 CATCACTGTGCCACATA-TTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584655 21 - 190850796 TGTCACTGTGCCGAATATTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068536 21 - 14256875 TGTCACTGTGCCGAACATTTG i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17479478 21 - 93316391 TGTCACTGTGGCACATATTTG i micMur3.chr14 I 3 C 0 s proCoq1.NW_012145301v1 3900205 21 + 3993831 TGTCGCTGTGGCACATATTTG i proCoq1.NW_012145301v1 I 3 C 0 s otoGar3.GL873580 11200423 21 - 11315646 TGTCATCATGCCACATATTTG i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16904866 21 - 59632846 GGTCATTATGCCACATATTTG i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1405417 21 - 2520184 TCTCATTGTGCCACTTATTTG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 960190 48 - 2196201 I e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I a score=63558.000000 s hg38.chr4_KI270789v1_alt 68162 7 + 205944 CTTCCCT s panTro5.chr4 192859820 7 + 194502333 CTTCCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743540 7 + 195804263 CTTCCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780112 7 + 4876863 CCTCCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665477 7 + 115148730 CCTCCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949027 7 + 190429646 CTTCCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896486 7 + 189454096 CTTCCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274434 7 - 25927173 CCTCCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313643 7 + 4669795 CCTCCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272839 7 + 135778131 CCTCCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710729 7 - 2847728 CCTCCCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832538 7 + 2368649 CCTCCCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584676 6 - 190850796 CCT-CCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068557 7 - 14256875 CCTCCCC i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17479499 7 - 93316391 CCTTCCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3900226 7 + 3993831 CCTCCCC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11200444 2 - 11315646 -----CT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16904887 7 - 59632846 CCTCCTT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 960190 48 - 2196201 I e dasNov3.JH570353 1405438 0 - 2520184 C e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I a score=153242.000000 s hg38.chr4_KI270789v1_alt 68169 14 + 205944 GTCATCTTCAAAAG s panTro5.chr4 192859827 14 + 194502333 GTCATCTTCAAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743547 14 + 195804263 GTCATCTTCAAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780119 14 + 4876863 GTCATCTTCAAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665484 14 + 115148730 GTCGTCTTCAAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949034 14 + 190429646 GTCGTCTTCAAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896493 14 + 189454096 GTCGTCTTCAAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274441 14 - 25927173 GTCGTCTTCAAAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313650 14 + 4669795 GTCGTCTTCAAAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272846 14 + 135778131 GTCATATTCAAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710736 14 - 2847728 GTCGTCTTCAAAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832545 14 + 2368649 GTCATCTTCAAAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584682 14 - 190850796 ATCTTCTTCAAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068564 14 - 14256875 ATCTTCCTCAAAAG i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17479506 14 - 93316391 GTCTTCTTCAAAAG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3900233 14 + 3993831 GTCTTCTTCAAAAG i proCoq1.NW_012145301v1 C 0 I 4 s otoGar3.GL873580 11200446 14 - 11315646 GTCTTCTTCAAAAG i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 960190 48 - 2196201 I e dasNov3.JH570353 1405438 0 - 2520184 C e canFam3.chr16 16904894 0 - 59632846 C e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I a score=6588.000000 s hg38.chr4_KI270789v1_alt 68183 2 + 205944 AG s panTro5.chr4 192859841 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743561 2 + 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780133 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665498 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949048 2 + 190429646 AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896507 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274455 2 - 25927173 AT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313664 2 + 4669795 AT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272860 2 + 135778131 AT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710750 2 - 2847728 AC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832559 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584696 2 - 190850796 AG i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13068578 2 - 14256875 AG i saiBol1.JH378165 C 0 I 1 s micMur3.chr14 17479520 2 - 93316391 AG i micMur3.chr14 C 0 I 10 s otoGar3.GL873580 11200460 2 - 11315646 AG i otoGar3.GL873580 C 0 I 1 e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e dasNov3.JH570353 1405438 0 - 2520184 C e canFam3.chr16 16904894 0 - 59632846 C e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I a score=633485.000000 s hg38.chr4_KI270789v1_alt 68185 117 + 205944 TGGGCTAAggccaggcgcggtggctcacacctgtaatgctgacactttgggaggccgaggcgggtggatcacgaggtcaggagatggagaccatcctggctaacaaggcgaaatgct s panTro5.chr4 192859843 117 + 194502333 TGGGCTAAggccaggcgcggtggctcacacctgtaatgctgacactttgggaggccgaggcgggtggatcatgaggtcaggagatggagaccatcctggctaacaaggtgaaatgct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743563 117 + 195804263 TGGGCTAAggccaggcgcggtggctcacacctgtaatgctgacactttgggaggccgaggcgggtggatcattaggtcaggagatggagaccatcctggctaacaaggcgaaatgct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780135 117 + 4876863 TGGGCTAAggccgggcgcggtggctcacacctgtaatgctgacactttgggaggccgaggcgggtggatcacaaggtcaggagatggagaccatcctggctaacaaggcgaaacgct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665500 116 + 115148730 TGGGCTAAggccgggcgtggtggctcacgcctgtaatgctgacactttgggaggcccaggtgggcggatgacgaggtca-gagatggagaccatcctggctaacaaggtgaaaccct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949050 117 + 190429646 TGGGCTAAggccaggcatggtggttcatgcctgtaatgctgacgctttgggagaccgaggtgggtggatcccgaggtcaggagatggagaccatcctggccaacatagcaaaactct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896509 117 + 189454096 TGGGCTAAggccaggcatggtggttcatgcctgtaatgctgacgctttgggagaccgaggtgggtggatcccgaggtcaggagatggagaccatcctggccaacatagcaaaactct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274457 117 - 25927173 TGGGCTAAggccaggcacggtggttcatgcctgtaatgctgacgctttgggagaccgaggtgggtggatcccgaggtcaggagatggagaccatcctggccaacatagcaaaactct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313666 117 + 4669795 TGGGCTAAggccaggcacggtggttcatgcctgtaatgctgacgctttgggagaccgaggtgggtggatcacaaggtcaggagatggagaccatcctggccaacatagcgaaactct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272862 117 + 135778131 TGTGCTAAggccaggcgcggtggttcatgcctgtaatgctgacgctttgggagacctaggtgggtggatcacgaggtcaggaaatggagaccatcctggccaacatagcgaaactct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710752 117 - 2847728 TGGGCTAAggccaggcacggtggttcatgcctgtaatgctgacgctttgggagaccgaggtgggtggatcacaaggtcaggagatggagaccatcctggccaacatagcgaaactct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832561 117 + 2368649 TGGGCTAAggccaggagcagtggctcacacctgtaatgctgacactttgggagaccgaggtgggtggatcacgaggtcagaagatggagaccatcctgcccaacatagcgaaactct i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e dasNov3.JH570353 1405438 0 - 2520184 C e canFam3.chr16 16904894 0 - 59632846 C e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I e saiBol1.JH378165 13068580 1 - 14256875 I e otoGar3.GL873580 11200462 1 - 11315646 I a score=7800.000000 s hg38.chr4_KI270789v1_alt 68302 1 + 205944 g s panTro5.chr4 192859960 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743680 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780252 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665616 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949167 1 + 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896626 1 + 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274574 1 - 25927173 g i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313783 1 + 4669795 g i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272979 1 + 135778131 g i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710869 1 - 2847728 g i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832678 1 + 2368649 g i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16904894 1 - 59632846 G i canFam3.chr16 C 0 C 0 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e dasNov3.JH570353 1405438 0 - 2520184 C e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I e saiBol1.JH378165 13068580 1 - 14256875 I e otoGar3.GL873580 11200462 1 - 11315646 I a score=103055.000000 s hg38.chr4_KI270789v1_alt 68303 16 + 205944 tctttactaaaaatac s panTro5.chr4 192859961 16 + 194502333 tctttactaaaaatac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743681 16 + 195804263 tctttactaaaaatac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780253 16 + 4876863 tctttactaaaaatac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665617 16 + 115148730 tctctactaaaaattc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949168 16 + 190429646 tctctactgaaaatac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896627 16 + 189454096 tctctactgaaaatac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274575 16 - 25927173 tctctactgaaaatac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313784 16 + 4669795 tctctactaaaaatac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272980 16 + 135778131 tctctactaaaaatac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710870 16 - 2847728 tctctactaaaaatac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832679 16 + 2368649 tctctactaaaaatac i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16904895 16 - 59632846 TCTTCTTCAAAACTGC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1405438 16 - 2520184 TCTTTCTTCGAAATAC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I e saiBol1.JH378165 13068580 1 - 14256875 I e otoGar3.GL873580 11200462 1 - 11315646 I a score=832117.000000 s hg38.chr4_KI270789v1_alt 68319 161 + 205944 aaaaaattagccgggcatggtggtgtgcatctgtagtcccagctacccgggaggctgaggcaggagaatcacttgaacccgggaggcgaaaagttgcagtgagccaagatcgcgccactgcactccagcctgggtaacagagcgagagactccat-------------gaaaaa s panTro5.chr4 192859977 161 + 194502333 aaaaaattagccaggcatggtggtgtgcatctgtagtcccagctacccgggaggctgaggcaggagaatcacttgaacccgggaggcg-aaagttgcagtgagccaagatcgcgccactgcactccagcctgggtaacagagtgagagactccatc------------aaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743697 160 + 195804263 aaaaaattagccaggcatggtggtgtgcatctgtagtcccagctacccgggaggctgaggcaggagaatcacttgaacccgggaggcg-aaagttgcagtgagccaagatcgcgccactgcactccagcctgggtaacagagtgagagactccat-------------caaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780269 173 + 4876863 aaaaaattagctgggcgtggtggtgcacatctgtagtcccagctacccgggaggctgaggcaggagaatcacttgaacctcggaggcg-aaggttgcagtgagccgagatcgcgccactgcactccagcctgggtaacagagcgggagactccatcaaaaaaaaaaaaaaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665633 171 + 115148730 aaaaaattagccgggtgtggtggtgcgcatctgtagtcccagctgctcgggaggctgaggcaggagaatcacttgaacccgggaggcg-aaggttgcagtgagccgagatcgtgccactgcactccagcctgggtaacagagtgagagactctgtcaaaaaaaata--aaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949184 165 + 190429646 aaaaaattagccaggtgtggtggtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccgggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgggtaacagagctagagactccatcaaaa--------aaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896643 165 + 189454096 aaaaaattagccaggtgtggtggtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccgggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgggtaacagagcgagagactccatcaaaa--------aaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274591 164 - 25927173 aaaaaa-tggccaggtgtggtggtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccgggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgggtaacagagcgaaagactccatcaaaa--------aaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313800 165 + 4669795 aaaaaattagacaggcgtggtggtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccaggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgggtaacagagtgagagactccatcaaaa--------aaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134272996 163 + 135778131 aaaaaattagccaggtgtggtggtgctcacctgtagtcccaggtacttggaaggctaaggaaggagaatcactggaacccgggaggtg-gaagttgcagtgagctgagatcacaccactgcactgcagcctaggtaac--agccagagactccaataaaa--------aaaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2710886 165 - 2847728 aaaaaattagacaggcgtggtggtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccaggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgggtaacagagtgagagactccatcaaaa--------aaaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832695 157 + 2368649 aaaaaattagccaggtgtggtagtgctcacctatagtcccaggtacttggaaggctaaggcaggagaatcactggaacccgggaggcg-gaggttgcagtgagctgagatcacgccactgcactgcagcctgtgtaacagagcgagagactccat----------------aaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e dasNov3.JH570353 1405454 0 - 2520184 C e canFam3.chr16 16904911 1 - 59632846 I e mm10.chr8 86533169 1408 - 129401213 I e aotNan1.NW_018492112v1 3356402 40 - 5030052 I e saiBol1.JH378165 13068580 1 - 14256875 I e otoGar3.GL873580 11200462 1 - 11315646 I a score=40538.000000 s hg38.chr4_KI270789v1_alt 68480 7 + 205944 aaaagaa s panTro5.chr4 192860138 7 + 194502333 aaaaGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743857 7 + 195804263 aaaaGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780442 7 + 4876863 aaaaGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665804 7 + 115148730 aaaaGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949349 7 + 190429646 aaaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896808 7 + 189454096 aaaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274755 7 - 25927173 aaaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313965 7 + 4669795 aaaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273159 7 + 135778131 aaaGTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711051 7 - 2847728 aaaaaaG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832852 7 + 2368649 aaaaTAG i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3356442 7 - 5030052 AAAAGAG i aotNan1.NW_018492112v1 I 40 I 1 s mm10.chr8 86534577 7 - 129401213 AGAAGAG i mm10.chr8 I 1408 I 1 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e dasNov3.JH570353 1405454 0 - 2520184 C e canFam3.chr16 16904911 1 - 59632846 I e saiBol1.JH378165 13068580 1 - 14256875 I e otoGar3.GL873580 11200462 1 - 11315646 I a score=-8251.000000 s hg38.chr4_KI270789v1_alt 68487 1 + 205944 -T s panTro5.chr4 192860145 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743864 1 + 195804263 -T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780449 1 + 4876863 -T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665811 1 + 115148730 -T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949356 1 + 190429646 -G i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187896815 1 + 189454096 -G i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24274762 1 - 25927173 -a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313972 1 + 4669795 -a i cerAty1.NW_012001672v1 C 0 I 2 s chlSab2.chr7 134273166 1 + 135778131 -G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711058 1 - 2847728 -T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832859 1 + 2368649 -T i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11200463 1 - 11315646 -T i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86534585 1 - 129401213 -T i mm10.chr8 I 1 C 0 s dasNov3.JH570353 1405454 1 - 2520184 C- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189584698 1 - 190850796 I e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e canFam3.chr16 16904911 1 - 59632846 I e aotNan1.NW_018492112v1 3356449 1 - 5030052 I e saiBol1.JH378165 13068580 1 - 14256875 I a score=1766.000000 s hg38.chr4_KI270789v1_alt 68488 1 + 205944 -G s panTro5.chr4 192860146 1 + 194502333 -G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743865 1 + 195804263 -G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780450 1 + 4876863 -G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665812 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949358 1 + 190429646 -G i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187896817 1 + 189454096 -G i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24274763 1 - 25927173 -G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313975 1 + 4669795 -G i cerAty1.NW_012001672v1 I 2 C 0 s chlSab2.chr7 134273167 1 + 135778131 -G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711059 1 - 2847728 -G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832860 1 + 2368649 -G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584699 1 - 190850796 -G i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13068581 1 - 14256875 -A i saiBol1.JH378165 I 1 C 0 s aotNan1.NW_018492112v1 3356450 1 - 5030052 -G i aotNan1.NW_018492112v1 I 1 C 0 s dasNov3.JH570353 1405455 1 - 2520184 T- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 960190 48 - 2196201 I e proCoq1.NW_012145301v1 3900247 4 + 3993831 I e micMur3.chr14 17479522 10 - 93316391 I e canFam3.chr16 16904911 1 - 59632846 I e mm10.chr8 86534586 0 - 129401213 C e otoGar3.GL873580 11200464 0 - 11315646 C a score=116153.000000 s hg38.chr4_KI270789v1_alt 68489 8 + 205944 GGCTAGAG s panTro5.chr4 192860147 8 + 194502333 GGCTAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743866 8 + 195804263 GGCTAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780451 8 + 4876863 GGCTAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665813 8 + 115148730 GGCTAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949359 8 + 190429646 GGCTAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896818 8 + 189454096 GGCTAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274764 8 - 25927173 GGCTAGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313976 8 + 4669795 GGCTAGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273168 6 + 135778131 --CTAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711060 8 - 2847728 GCCTAGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832861 8 + 2368649 GGCTAGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584700 8 - 190850796 GCCTAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068582 8 - 14256875 GGCTAGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960238 8 - 2196201 GGCTAGAA i cebCap1.NW_016107886v1 I 48 C 0 s aotNan1.NW_018492112v1 3356451 8 - 5030052 GACTAGAA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3900251 8 + 3993831 GGCTAGAT i proCoq1.NW_012145301v1 I 4 C 0 s otoGar3.GL873580 11200464 8 - 11315646 GGCCAGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86534586 8 - 129401213 GGCTACAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16904912 8 - 59632846 GGCTAGAT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1405456 8 - 2520184 GGCTAGAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17479522 10 - 93316391 I a score=2086519.000000 s hg38.chr4_KI270789v1_alt 68497 125 + 205944 CTTGGCTACACTGCGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACCGACTCTG----------GAATTGTGTGCTCATATCAGACAGGTTGTGGCTAAA s panTro5.chr4 192860155 125 + 194502333 CTTGGCTACACTGCGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACCGACTCTG----------GAATTGTGTGCTCATATCAGACAGGTTGTGGCTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743874 125 + 195804263 CTTGGCTACACTGCGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACCGACTCTG----------GAATTGTGTGCTCATATCAGACAGGTTGTGGCTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780459 125 + 4876863 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTTACTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665821 123 + 115148730 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACAGACTCTG----------GAATTGTGTGCTCATCTC--ATAGGTTGTAGCTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949367 125 + 190429646 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896826 125 + 189454096 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274772 125 - 25927173 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3313984 125 + 4669795 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTTTCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273174 125 + 135778131 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTGCCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGCTGTGGCTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711068 125 - 2847728 CTTGGCTACACTGTGAGATTTATTGTCTTTGAACTTTCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGTGTGCTCATATCAGATAGGTTGTGGCTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832869 124 + 2368649 CTTGGCTACACTGTGAGATTTATTGTCTTCGAACTGCCACTTATTCTGAGCTGCTCAGTTCCATTAATCAGCCTGACTTACTGACTCTG----------GAATTGT-TGCTCATATCAGATAGGTTGTGGCTAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584708 132 - 190850796 CTTGGCTACACTGTGAGATTTGTTGTCTTTGAACTGCCACTGACTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACTGGCTCTGGTGCTCTCT-GGAT--TGTGCTCATATCAGGTAGGTGGTGGCTGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068590 134 - 14256875 CTTGGCTACACTACGAGATTTATTGTCTTTGGACTGCCACTTACTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACTGGCTCTGGTGCTCTCT-GGATTGTGTGCTCATATCGGATAGGTGGTGGCTGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960246 134 - 2196201 CTTGGCTACGCCATGAGATTTATTGTCTTTGAACTGCCACTTACTCTGAGCTGCTCACTTCCATTAATCAGCCAGACTCACTGGCTCTGGTGCTCTCT-GGATTGTGTGCTCATATCAGATAGGTGGTGGCTGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356459 133 - 5030052 CTTGGCTACGCCATGAGATTTA-TGTCTTTAAACTGCCACTTACTCTGAGCTGCTCACTTCCATTAATCAGCCTGACTTACTGGCTCTGGTGCTCTCT-GAATTGTGTGCTCATATCAGATGGGTGGTGGCTGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17479532 135 - 93316391 CTTAGCTACACTGCAAGATTTATCGTCGTTGAACTACCACTTACACCAAGCTGCTCACATCCATTAATCAGCCTGACTTACTGACCCTGGTGCTATCTGGAGTTGTGTGCTTACATCAGATAGGCTGTAGCTGAA i micMur3.chr14 I 10 C 0 s proCoq1.NW_012145301v1 3900259 135 + 3993831 CTTAGCTACACTGTAAGATTTATTGTCTTTGAACTACCACTTACACCAAGCTGCTGACATCCATTAATCAGCCTGACTTACTGACCCTGGTGCTATCTGGAGTTGTGTGCTTACATCAGATAGGTTGTAGCTCAA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11200472 133 - 11315646 CTTAGCT--ACTGCAAGATTTATTGTCTTTGAACGGCCACTTACATCGAGTGGCTCACACCTATTAATCAGCCTGACTTACTGACCCTGGTGCTGTCCAGAGATGTGTGCTTACATCAGATAGGTTGCCGTGAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86534594 134 - 129401213 CTTGGGTACCTGCTAAGATTTATTGTCTTTGAACTGCCACTTCTTCTTGGCTGTCCACATTCATTAATCAGTATGACTTACTGGCTAGGGTGCTATCT-GCAATGTGTGTTTTTATCAGATAGGCTGTGGCTAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16904920 135 - 59632846 CTTGGCTATAGTGTAAGATTTATTGTCTTTGAGCTGCCACTGCTTCTGAGCTGCTGACACCCATTAATCAGTCTGACTTACTGATCCTGGTGCTATCTGGAACTGTGTGCTTATATTAGATAGGTTGTAGCTGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1405464 134 - 2520184 CTTGGCTATCCTCTAAGATTTATTGTCTTTGAACTGTCGCTGATTCTGAGCTGTCCACAGTCATTAATCAGGCTGACTTACTAATCCTGGTGCTCTCTGAAACTGTGTGCT-ATGTCAGATAGGTGGTAGCTAGA i dasNov3.JH570353 C 0 M 187 a score=1134687.000000 s hg38.chr4_KI270789v1_alt 68622 73 + 205944 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAGTC-ATGCTGGCAAATAT------------------------GTGGG s panTro5.chr4 192860280 73 + 194502333 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAGTC-ATGCTGGCAAATAT------------------------GTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192743999 73 + 195804263 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAGTC-ATGCTGGCAAATAT------------------------GTGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780584 73 + 4876863 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAGAC-ATGCTGGCAAATAT------------------------GTGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112665944 73 + 115148730 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAGTC-ATGCTGGCAAATAT------------------------GTGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949492 73 + 190429646 GTCCATCCATTATATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ACGCTGGCAGGTAT------------------------GTGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187896951 73 + 189454096 GTCCATCCATTATATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ACGCTGGCAGGTAT------------------------GTGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274897 73 - 25927173 GTCCATCCATTATATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ACGCTGGCAGGTAT------------------------GTGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314109 73 + 4669795 GTCCATCCATTATATTTCTAGGCCCTTACTTCTCTGTACAACCCCAGTTCAATC-ACGCTGGCAAGTGT------------------------GTGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273299 73 + 135778131 GTCCATCCATTATATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ATGCTGGCAAGTAT------------------------GTGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711193 73 - 2847728 GTCCATCCATTATATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ACGCTGGCAGGTAT------------------------GTGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 832993 73 + 2368649 GTCCATCCATTACATTTCTAGGCCCTCACTTCTCTGTACAACCCCAGTTCAATC-ATGCTGGCAAATAT------------------------GTGGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584840 73 - 190850796 GTCCATCCATTATATTTCTAGGCTCTCACTTCCCTGTACAATCTCAGTTCAATC-ATGCTGGCAGATAT------------------------GTGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068724 73 - 14256875 GTCCATCCATTATATTTCTAGGCTCTCACTTCCCTGTACAGTCTCAGTTCAATC-ATGCTGGCAAATAT------------------------GTGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960380 73 - 2196201 GTCCATCCATTACATTTCTAGGCTCTCACTTCCCTGTACAATCTCAGTTCAGTC-ATGCTAGCAAATAT------------------------GTGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356592 73 - 5030052 GTCCATCCATTATATTTCTAGGCTCTCACTTCTCTGTGCAATCTCAGTTCAATC-ATGCTGGCAAATAT------------------------GTGGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17479667 73 - 93316391 GTCCATCCATTATATTTCTAGGCTCTCACTTCTCTGTACAACCCCAGTTCAATC-ATGCTGGCGAATAT------------------------CTGGG i micMur3.chr14 C 0 I 262 s proCoq1.NW_012145301v1 3900394 73 + 3993831 GTCCATCCACTATATTTCTAGGCTATCACTTCTCTGTACAATCCCAGTTCAATC-ATGCCGGCGAATAT------------------------CTGGG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11200605 73 - 11315646 GGCTATCCATTATCTTTCTCGGCTTTCACTTCTCTGTGCAATTCCAGTTGACTC-ACGCCTGCACATAC------------------------CCAGG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86534728 72 - 129401213 GTCCATCCATTATTTCTC-AGACTCTAGCTTCCTGCCTCCATCCCGGATTAATC-ATTCTGGCAAATAT------------------------CTGAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16905055 98 - 59632846 GTTCATCCTTTATGTTTCCAGATTCTAACGTCTCTGTACAACCCCTGCTTAATCAATGCTGGCAAATATCTATATGATCCCAGCTTAATCATGCTGGG i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1405598 187 - 2520184 M a score=644669.000000 s hg38.chr4_KI270789v1_alt 68695 48 + 205944 ---------------------------GAGCGCTCAGCCCTGAGGAGTTCCATAAGGGAAAGTT------CCACATGGGCT s panTro5.chr4 192860353 48 + 194502333 ---------------------------GAGCACTCAGCCCTGAGGAGTTCCATAAGGGAAAGTT------CCACATGGGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744072 48 + 195804263 ---------------------------GAGCACTCAGCCCTGAGGAGTTCCATAAGGGAAAGTT------CCACATGGGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780657 48 + 4876863 ---------------------------GAGTGCTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACATGGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666017 48 + 115148730 ---------------------------GAGCGCTCAGCCCTGAGAAGTTCTATAAGGGAAAGTT------CCACATGGGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949565 48 + 190429646 ---------------------------GCGCGCTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------TCACATGGGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897024 48 + 189454096 ---------------------------GCGCGCTCAGCCCTGTGGAGTTCTATAAGGGAAAGTT------TCACATGGGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24274970 48 - 25927173 ---------------------------GCGCGCTCAGCCCTGTGGAGTTCTATAAGGGAAAGTT------TCACATGGGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314182 48 + 4669795 ---------------------------GCACGCTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACATGGGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273372 48 + 135778131 ---------------------------GCACGCTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACATGGGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711266 48 - 2847728 ---------------------------GCACGCTCAGCCCTGAGGAGTTCTATAAGGGGAAGTT------CCACATGGGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833066 48 + 2368649 ---------------------------GTGCACTCAGCCCTGAGGAGTTCTATAAGGGGAAGTT------CCACATGGGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584913 48 - 190850796 ---------------------------GAGCACTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACATGGGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068797 48 - 14256875 ---------------------------GAGCACTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACATGGGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960453 48 - 2196201 ---------------------------GAGCACTCAGCCCTGAGAAGTTCTATAAGGGAAAGTT------CCACATGGTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356665 48 - 5030052 ---------------------------GAGCACTCAGCCCTGAGGAGTTCTATAAGGGAAAGTT------CCACACAGGCT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3900467 48 + 3993831 ---------------------------GAGCATTTAGTCCTGAGGGGTTCTGTAAGAGGAAGTT------CCACATGGGCT i proCoq1.NW_012145301v1 C 0 I 219 s otoGar3.GL873580 11200678 46 - 11315646 ---------------------------TACCGCTCAGCTCTCA-GGGCTCTGTAAGGGGAAGAT-------AGCATGGACT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86534800 48 - 129401213 ---------------------------GAGCATTTATCCTTGAAGGGTTCTATAAGGGAAGGAT------CCAAATGAGCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16905153 81 - 59632846 AAGTATCACACAGACATTATAGAACACCCTCACTTAGCTTTGAGGGGTTCTATAAGGGAAAATTCTAAATCTATATGGGCT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17479740 262 - 93316391 I e dasNov3.JH570353 1405598 187 - 2520184 M a score=390869.000000 s hg38.chr4_KI270789v1_alt 68743 34 + 205944 TGGATTATATACCT------------------------------------------------------------AATAACTCAGAG-C-AAATTTG s panTro5.chr4 192860401 34 + 194502333 TGGATTATATACCT------------------------------------------------------------AATAACTCAGAG-C-AAATTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744120 34 + 195804263 TGGATTATATACct------------------------------------------------------------aataactctgag-c-aaatttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780705 34 + 4876863 TGCATTATATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666065 34 + 115148730 TGGATTATATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949613 34 + 190429646 TGGATTATATACCC------------------------------------------------------------AGTAATTCAGAG-C-AAATCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897072 34 + 189454096 TGGATTATATACCC------------------------------------------------------------AGTAATTCAGAG-C-AAATCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275018 34 - 25927173 TGGATTATATACCC------------------------------------------------------------AGTAATTCACAG-C-AAATCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314230 34 + 4669795 TGGATTATATACCC------------------------------------------------------------AGTAATTCAGAG-C-AAATCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273420 34 + 135778131 TGGATTATATAGCC------------------------------------------------------------AACAATTCAGAG-C-AAATCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711314 34 - 2847728 TGGATTATATACCC------------------------------------------------------------AGTAATTCAGAG-C-AAATCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833114 34 + 2368649 TGGATTATATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584961 34 - 190850796 TGGATTGTATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068845 34 - 14256875 TGGATTGTATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960501 34 - 2196201 TGGATTGTATGCCC------------------------------------------------------------AATAATTCAGAG-C-AAATCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356713 34 - 5030052 TGGATTGTATACCC------------------------------------------------------------AATAATTCAGAG-C-AAATCTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11200724 94 - 11315646 TGGATTGTACACCCCACGGGGTGGGGAACCTGTGGCCTTCTAGATCCTGGAGTGTGGCCTTTTGACTGAATCCAAACTTTTCAGAG-C-AAATCCT i otoGar3.GL873580 C 0 I 61 s mm10.chr8 86534848 35 - 129401213 TGGATGATAAACTC------------------------------------------------------------GATAACTCAGAATC-AAATCTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16905234 35 - 59632846 TAGATTATATACCC------------------------------------------------------------AATAATTCAGAA-CTAAATCTG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3900515 219 + 3993831 I e micMur3.chr14 17479740 262 - 93316391 I e dasNov3.JH570353 1405598 187 - 2520184 M a score=1229456.000000 s hg38.chr4_KI270789v1_alt 68777 88 + 205944 TGAAAGCTT-------------------------------------CACATGTCATTTACAATTTGTAGGCACTGCAGAACTGT-AGATTCTAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT s panTro5.chr4 192860435 86 + 194502333 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGG--CTGCAGAACCGT-AGATTCTAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744154 86 + 195804263 tgaaagctt-------------------------------------catatgtcatttacaatttgtagg--ctgcagaaccgt-agattctaaagagagaaggcTATGCCTTCTG-ATGATAGTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780739 88 + 4876863 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGGCACTGCAGAACCGT-AGATTCTAAAAAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666099 88 + 115148730 TGAAAGCTT-------------------------------------CATATGTCATTTACAGTTTGTAGGCACTGCAGAACTGT-AGATTCTAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949647 88 + 190429646 TGAAAGCTT-------------------------------------CATATGTCATTTACAGTTTGTAGGCACTGTAGAACCGT-AGATTCGAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897106 88 + 189454096 TGAAAGCTT-------------------------------------CATATGTCATTTACAGTTTGTAGGCACTGTAGAACCGT-AGATTCGAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275052 88 - 25927173 TGAAAGCTT-------------------------------------CATATGTCATTTACAGTTTGTAGGCACTGTAGAACCGT-AGATTCGAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314264 88 + 4669795 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGGCACTGCAGAACCGT-AGATTCCAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273454 88 + 135778131 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGGCACTGCAGAACCGT-AGATTTGAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711348 88 - 2847728 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGGCACTGCAGAACCGT-AGATTCCAAAGAGAGAAGGCTGTGCCTTCTG-ATGATAGTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833148 88 + 2368649 TGAAAGCTT-------------------------------------CATATGTCATTTACAATTTGTAGGTACTGCAGAACCGT-AGATTCAAAAGAGAGAAGGCTATGCCTTCTG-ATGATAGTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189584995 88 - 190850796 TGAAAGCTT-------------------------------------CGTCTGTCATTTACAATTTGTAGGCACCACAGAACCAT-AGATTCGAAAGAGAGAAGGATATGACCTCTG-ATGATCATCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068879 88 - 14256875 TGAAAGCTT-------------------------------------TGTCTATCATTTACAATTTGTAGGCATCGCAGAACCAT-AGATTCGAAAGAGAGAAGGATATGACCTCTG-ATGATCGTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960535 88 - 2196201 TGAAAGCTT-------------------------------------CGTCTGTCATTTGCAATTTGTAGGCACTGCAGAACCAT-AGATTCGAAAGAGAGAAGGATATGACCTCTG-ATGATCGTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356747 88 - 5030052 TGAAAGCTT-------------------------------------CGTCTGTCATTTACAATTTGTAGGCACTGCAGAACCAT-AGATTCGAAAGAGAGAAGGATATGACCTCTG-ATAATCGTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480002 88 - 93316391 TGAAAGCTT-------------------------------------CAGATGTGATTTACAATCTGTAGAGACTGCAGAACTGT-AGATTTTAAATAGAGAAGGATGTTCCCTCGG-ATGATATTCT i micMur3.chr14 I 262 C 0 s proCoq1.NW_012145301v1 3900734 89 + 3993831 TGAAAGCCT-------------------------------------CAGATGTCATTTACAATCTGTAGGCACTGCAGAACTGTAAGATTTTAAATAGAGAAGGATGTGCCCTCTG-ATGATATTCT i proCoq1.NW_012145301v1 I 219 C 0 s otoGar3.GL873580 11200879 125 - 11315646 TGAAGGACCACATGTGGCTTTGAGGGTACAGGTTCCCCAGCCCTGACAGATGTCATTCACAATCTGTAGGCACTGTGGGACTGC-AGATGTAAGATAAAGAAGTATGTACCCTCTG-ATGATATTCt i otoGar3.GL873580 I 61 I 282 s mm10.chr8 86534883 87 - 129401213 TGAAAGTGC-------------------------------------CAGGTGTAATTCACAACCTCCAGGCATTGCAGAACTGC-AGGTTTTTAGTGGAGAAG--TTTGCATACTGAATGGTAAACT i mm10.chr8 C 0 C 0 s canFam3.chr16 16905269 84 - 59632846 TAAAAGCTT-------------------------------------CAGATGTCATTTACAATCTGTATGCACTGCAGAACTGT-GTATTTTCAATAAACA----CAAGCTCTCTG-ATGGTCTTCT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1405598 187 - 2520184 M a score=389888.000000 s hg38.chr4_KI270789v1_alt 68865 25 + 205944 TAAATCATGGAAAGCTAAAACAATA s panTro5.chr4 192860521 25 + 194502333 TAAATCATGGAAAGCTAAAACAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744240 25 + 195804263 TAAATCATGGAAAGCTAAAACAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780827 25 + 4876863 TAAATCATGGAAAGCTAAAACAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666187 25 + 115148730 TAAATCATGGAAAGCTAAAACAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949735 25 + 190429646 TAAATCATGGAAAGCTAAAACAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897194 25 + 189454096 TAAATCATGGAAAGCTAAAACAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275140 25 - 25927173 TAAATCATGGAAAGCTAAAACAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314352 25 + 4669795 TAAATCATGGAAAGCTAAAACAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273542 25 + 135778131 TAAATCATGGAAAGCTAAAACAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711436 25 - 2847728 TAAATCACGGAAAGCTAAAACAATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833236 25 + 2368649 TAAGTCATGGAAAGCTAAAGCAATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189585083 25 - 190850796 TATATCATGGAAAGCTAAAACAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068967 25 - 14256875 TAAATCATGGAACGCTAAAGCAATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960623 25 - 2196201 TAAATCATGGAACGCTAAAACAATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356835 25 - 5030052 TAAATCATGGAAAGCTAAAACAATA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480090 25 - 93316391 TAAATCATTGAAAGCTAAAACAGTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3900823 25 + 3993831 TAAATCATGGAAAGCTAAAACAATA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11201286 20 - 11315646 TGAACTATGAAAAGCAAA-----TA i otoGar3.GL873580 I 282 C 0 s mm10.chr8 86534970 23 - 129401213 TAAATCATGAACAGTTAAAACAG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16905353 25 - 59632846 CAACTCATTGAAAGCTAAAACAATG i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1405598 187 - 2520184 M a score=613303.000000 s hg38.chr4_KI270789v1_alt 68890 39 + 205944 AACACCTCAAATTCAGTGTATCTTTGCCTTGGA--AAAAGG s panTro5.chr4 192860546 39 + 194502333 AACACCTCAAATTCAGTGTATCTTTGCCTTGGA--AAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744265 39 + 195804263 AACACCTCAAATTCAGTGTATCTTTGCCTTGGA--AAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780852 39 + 4876863 AACACCTCAAATTCAGTGTATCTTTGCCTTGGA--AAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666212 39 + 115148730 AACACCTCAAATTCAGTGTATCTTTGTCTTGGA--AAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949760 39 + 190429646 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897219 39 + 189454096 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275165 39 - 25927173 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314377 39 + 4669795 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273567 39 + 135778131 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711461 39 - 2847728 AACACCTCAAATTCAGTGTATTTTTGCCTTGGA--AAAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833261 39 + 2368649 AACACCTCAAATTCAGTGTATCTTTGCCTTGGA--AGAAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189585108 39 - 190850796 AACACCTTAAAATCAGCGTATCTCTGCCTTGGA--AAAAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13068992 39 - 14256875 AACACCTCAAATTCAGCGTATCTTTACCTTGGA--AAAAGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960648 39 - 2196201 AACACCTCAAATTCAGCATATCTTTACCTTGGA--AAAAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356860 39 - 5030052 AACACCTCAAATTCAGCGTATCTTTGCCTTGGA--AAAAGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480115 39 - 93316391 AACATCCCAAATTCAGTGTCCCTTTGCCTTGGA--AAGGGG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3900848 41 + 3993831 AACACCCCAAATTCAGTGTACCTTTGCCTTAGAATAAAAGG i proCoq1.NW_012145301v1 C 0 I 11 s otoGar3.GL873580 11201306 38 - 11315646 AACAT-GCAAATTCAGTGTATTTCCACCTTGGA--AAAAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86534993 35 - 129401213 AACTCCTGATATTCAATGTATC----ACTTAGA--AAAAAA i mm10.chr8 C 0 I 2 s canFam3.chr16 16905378 38 - 59632846 AACACCCCA-GTTCAATAAATGTTTTCGTTGGA--TAAAAA i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1405785 39 - 2520184 AATATCCCAAAGTAAATGTACCTTTGCCCTGGG--TAAACT i dasNov3.JH570353 M 187 C 0 a score=123078.000000 s hg38.chr4_KI270789v1_alt 68929 9 + 205944 GTTAGACTT s panTro5.chr4 192860585 9 + 194502333 GTTAGACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744304 9 + 195804263 GTTAGACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780891 9 + 4876863 GTTAGACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666251 9 + 115148730 GTTAGACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949799 9 + 190429646 GTTAGACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897258 9 + 189454096 GTTAGACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275204 9 - 25927173 GTTAGACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314416 9 + 4669795 GTTAGACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273606 9 + 135778131 GTTAGACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711500 9 - 2847728 GTTAGACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833300 9 + 2368649 GCTAGACTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189585147 9 - 190850796 GCCGAACTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069031 9 - 14256875 GTTGGACTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960687 9 - 2196201 GTTGGACTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3356899 9 - 5030052 GTTGGACTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480154 9 - 93316391 GTGAGTCTT i micMur3.chr14 C 0 I 1 s otoGar3.GL873580 11201344 8 - 11315646 -CAAGTCTT i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86535030 9 - 129401213 GCCACACTT i mm10.chr8 I 2 I 1 s canFam3.chr16 16905417 9 - 59632846 GTTAGATTT i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1405824 9 - 2520184 GTCATACTT i dasNov3.JH570353 C 0 I 1 e proCoq1.NW_012145301v1 3900889 11 + 3993831 I a score=3791780.000000 s hg38.chr4_KI270789v1_alt 68938 244 + 205944 CATGGTTGCAATTCACCTCACTCGCCTGTGGTTCATTGATTCTGACATCTAATTAAATTGATCATCTACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGCAAAGAAAACTTAGCTCATACTTGTAATTTACTTTAAGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TGGTTTTGACTAGGAAATTGTACACAATTGTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA s panTro5.chr4 192860594 244 + 194502333 CATGGTTGCAATTCACCTCACTCGCCTGTGGTTCATTGATTCTGACATCTAATTAAATTGATCATCTACAGTGATCAC-AAGGCAA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTAATTTACTTTAAGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TGGTTTTGACTAGGAAATTGTACACAATTGTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744313 244 + 195804263 CATGGTTGCAATTCACCTCACTCGTCTGTGGTTCATTGATTCTGACATCTAATTAAATTGATCATCTACAGTGATCAC-AAGGCAA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTAATTTACTTTAAGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TGGTTTTGACTAGGAAATTGTACACAATTGTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3780900 240 + 4876863 CATGGTTGCAATTCACCTCACTCGCCTGTGGTTCATTGATTCTGACGTCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA-----------TTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTAATTTACTTTAAGGTTTCTATCCAGAATTGGGAACAAATAAGAAAT-------------TGGTTTTGACTAGGAAATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666260 244 + 115148730 CATGGTTGCAGTTCACCTCACTCGCCTGTGGTTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTACGGTTTCTATCTGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTATACAATTCTA-ATCATAATTTGGACTGGAATAATAACCATTGTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188949808 247 + 190429646 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGAAACACT----ACTGGCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATCCAGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACGCAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897267 244 + 189454096 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATCCAGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275213 244 - 25927173 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATAGTTTCTATCCAGAATTGGGAACAAATAAGAAAT-------------CTGTTTTGACTAGGAAATGGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314425 241 + 4669795 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGTGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACACAATTCTA----ATAATTTGGACTGGAATAATAACCACTGTACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273615 243 + 135778131 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGC-AAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATACGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711509 241 - 2847728 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGTGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAGTAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACACAATTCTA----ATAATTTGGACTGGAATAATAACCACTGTGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833309 244 + 2368649 CATGGTTGCAATTCACCTCACTCACCTGTGGCTCATTGATTCTGACATCTAATTAAATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAAACACTACTGGCAAAGTAAACTTAGCTCATACTTGTGATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGAAATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCACTGTGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189585156 244 - 190850796 CGTAGTTGCGATTCACCTGACTGGCCTGTGGGTCACGGGTTCTGACATCTCATTAGATTGATCAGCCACAGTGACCAC-AAGGCGA---CTG----TTTGCCAGACGTTACAGGCAAAATAAACGTAGCTCCTGTTTGTAATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGATATTGTACACAATTCTA-GTCATAATTTGGACTGGAATAATAATCATTGTGCA i calJac3.chr3 C 0 I 297 s saiBol1.JH378165 13069040 233 - 14256875 CACGCTTGTCATTCACCTGATTGGCCTGTGGTTCATGGATTCTGACATCTCATTAGATTCATCAGCCACAGTGATCAC-AAG-----------------GCCAGACATTACAGGCAAAATAAACTTAGCT-CTGTTTGTGATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------TCGTTTTGACTAGGATATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCATTGTGCA i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 960696 244 - 2196201 CATGGTTGCAATTCACCTGACTGGCCTGTGGTTCATGGATTCTGACATCTCATTAGATTGATCAGCCACAGTGATCAC-AAGGCAA---TTG----TTTGCCAGACATTATAGGCAAAATAAACTTAGCTCCTGTTTGTGATTTACTTTATGGTTTCTATCTGGAATTGGGAACAAATAAGAAAT-------------TTGTTTTGACTAGGATATTGTACACAATTCTA-GTCATAATTAGGACTGGAATAATAACCATTGTGCA i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3356908 243 - 5030052 CATGGTTGCAATTCACCTGACTGGCCTGTGGTTCATGGATTCTGACATCTCATTAGATTGATCAGCCACAGTGATCAC-AAGGCGA---TTG----TTTGCCAGACATCACAGGCGAAATAAACTTAGCTCCTATTTGTGATTTACTTTATGGTTTCTATCCGGAATTGGGAACAAATAAGAAAT-------------T-GTTTTGACTAGGATATTGTACACAATTCTA-ATCATAATTTGGACTGGAATAATAACCGTTGTGCA i aotNan1.NW_018492112v1 C 0 I 1 s micMur3.chr14 17480164 245 - 93316391 GATGGTTGCAATTCACCTCACTTG-CTGTGGTTCATTGGTTCTGACATGTCAATAAAATGATCAGCCCCAATGATCACTAAAGCAA---CTG----TTTGGCAAACATTACTGGCAACATAAACTTAGATTATACTTGTGATTTACTTTATGATTTCTTTCCAGGATTGGGGATAAATAAGGAAT-------------TTGTTTCTAACAAGAGATTGTATACAATTCTACATCATAATTTGTACTGGTATAATAATTATCATACA i micMur3.chr14 I 1 C 0 s proCoq1.NW_012145301v1 3900900 245 + 3993831 CATGGTTGCAATTCACCTCACTTGCCTGTGGTTCATTGGTTCTGACATGTCACTAAATTGATCAG-CCCAATGATCACTACAGCAA---TTG----TTTGCCAAACATTACTGGCAACATAAACTTAGCTTATACTTGTGATTTATTGTATGATTTCTATCCAGGATTGGAAAGAAATAAGGAAT-------------TTGTTTCGAGTAGGAAATTGTACACAATTCTACATCGTAATCTGTACTGGTGTAATAACCACCACGTA i proCoq1.NW_012145301v1 I 11 C 0 s otoGar3.GL873580 11201353 236 - 11315646 CATGGTTG---------TCACTTGCCTATGATCCATTGATTCTGACATCTCATTAAACTGATCAACCCCAATGATCACTAAAGCAA---TTAACTTTTTGACAAACATTAGTGGCAAAGTAAACTTAGCTTACATTTGTGATTTACTTTATGATTTCTGTCCAGGATTGGGAACAAATAAGGAAT-------------TTGTTTTGCATAGGAAATGGTATGCAATTCTACATCATAATTTGTACTGGTAT-----CTAATAAACA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86535040 245 - 129401213 CAGAGTTATAATTCACCTCAGTTGCCTGTGGTTCATTGATTCTGACATCTAATTAAATTGATCAGCTCCAATGATCACCAAGGCAA---CTG----TTGGCCAAACATTACTAGAAAAATAAGCTTGGTTTAAATTTCTGATTTATTTCATGGTTTCTACCCAAAATTGGAAATGCATAAG-AAT-------------TTGTTTTGAAGCAGAAATTATACACAACTGAGCACCATAATTTATATTGGCATATTAGCCACTCTGCG i mm10.chr8 I 1 I 1 s canFam3.chr16 16905427 253 - 59632846 CATGGTTGCAATTCACCTCATTCACCCATGGTGCACGGATTTTGACATCTAATTAAATTGATCAGCCACAAAAATCACTAAGGCAA---TTG----TTTTCCAAGCATCACTAGCAAAATAAATTTAGATTATACTTGCGATGTACTCTATTGTTTCTATCCAGAAGTGGGAACAAATAAGGAACAGGAAATTGAGCATAATTTGAATTAGGAAACA--ATACAATTGTATATAATAATTTATGC----ATAATGACCACTGTGCA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1405834 242 - 2520184 TATGGTAGCAACCCACTTCCCTTGCCTATGGCTCATTGACTGGGACATCTAATTAAATTGACCTGCCACAGTGATCATTAAGGAAA---TTG-----TTGCCAAGCATCACTGGCAAAATGATCTTAGATTATGCTTGTGGTTTATTTGAATGTTTCCATCTGGAATTGGTAACAAATAAGGAAT-------------TCATTTTGAGTAGGAAATTGAACATATTTACACATCATAATTCATACTGGTATAAT---TACTGTGCA i dasNov3.JH570353 I 1 C 0 a score=20993.000000 s hg38.chr4_KI270789v1_alt 69182 2 + 205944 TT s panTro5.chr4 192860838 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744557 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781140 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666504 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188950055 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897511 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275457 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314666 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273858 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711750 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833553 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13069274 1 - 14256875 -T i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 960941 1 - 2196201 -T i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3357152 1 - 5030052 -T i aotNan1.NW_018492112v1 I 1 C 0 s micMur3.chr14 17480409 2 - 93316391 TT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901145 2 + 3993831 TT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11201589 2 - 11315646 TT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86535286 1 - 129401213 T- i mm10.chr8 I 1 C 0 s canFam3.chr16 16905680 2 - 59632846 TT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406076 2 - 2520184 TT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189585400 297 - 190850796 I a score=4670996.000000 s hg38.chr4_KI270789v1_alt 69184 319 + 205944 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTATATTTATAGTTAACTGAATTTTGCCAATGTTTTCTTTCCACAAAGC---TTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACGAAAAGTATCTGTCAACTTTCAAGAAATAAAATGTTTTTG-TT------AAAAATCAATATTTATTAAAGCGAA-TGTCTTTTGAAAATTCAAGCAATATATAATTTGCAAACATTTGATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAATGGGTCAAGATAATAAATCAATATTTTCTCTCAAATTCTG s panTro5.chr4 192860840 322 + 194502333 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTATATTTATAATTAATTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAATGAAAAGTATCTGTCAACTTTCAAGAAATAAAATGCTTTTG-TT------AAAAATCAATATTTATTAAAGCGAA-TGTCTTTTGAAAATTCAAGCAATATATAATTTGCAAACATTTGATTAAAATAGTTTCAGTAATATATTTTTAGCTTCAGTGGGTCAAGATAATAAATCAATATTTTCTCTCAAATTCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744559 322 + 195804263 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTATATTTATAATTAATTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAATGAAAAGTATCTGTCAACTTTCAAGAAATAAAATGCTTTTG-TT------AAAAATCAATATTTATTAAAGCGAA-TGTCTTTTGAAAATTCAAGCAATATATAATTTGCAAACATTTGATTAAAATAGTTTCAGTAATATATTTTTAGCTTCAGTGGGTCAAGATAATAAATCAATATTTTCTCTCAAATTCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781142 322 + 4876863 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTATATTTATAGTTAACTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACGAAAAGTATCTGTCAACTTTCAGGAAATAAAATGCTTCTG-TT------AAAAATCAGTATTTATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATATATAATTTGCAAACATTTGATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAATATTTTCTCTCAAATTCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666506 312 + 115148730 TGCTTGTTTCTGACTTTGTTAATCTTCATAATATTCCTTTCAGGAGGTTGGTTATATTTATAGTTAATTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG---TTTAAGAAAAGAAACGAAAAGTATCTGTCAACTTTCAAGAAATAAAATGCTTTTG-TT------AAAAATCAATATTTATTA-----AA-TGTCATTTGAAAATTCAAGCAATATATAATTTGCAAACATTTGA-TAAAATAGTTTCAGTA--ATATTTTTAGCTTGAATGGGTCAGGATAATAAATCAATATTTTCTCTCAAATTCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188950057 319 + 190429646 TGCTTGTTTCTGACTTTGTTAGTCTCCATAATATTCCTTTCAGGAGGTTGGTTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAATAAACTAAAAGTATCTGTCAACTTTCAAGAAATAA---GCTTTTG-TT------AAAAATCAATATTTATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATATATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAGTATTTTCTCTCAAATTCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187897513 315 + 189454096 TGCTTGTTTCTGACTTTGTTAGTCTCCATAATATTCCTTTCAGGAGGTTGGTTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAATAAACTAAAAGTATCTGTCAACTTTCAAGAAATAA---GCTTTTG-TT------AAAAATCAA----TATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAGTATTTTCTCTCaaattctg i macFas5.chr5 C 0 I 1365 s macNem1.NW_012013133v1 24275459 315 - 25927173 TGCTTGTTTCTGACTTTGTTAGTCTCCATAATATTCCTTTCAGGAGGTTGGTTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAATAAACTAAAAGTATCTGTCAACTTTCAAGAAATAA---GCTTTTG-TT------AAAAATCAA----TATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAGTATTTTCTCTCAAATTCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314668 319 + 4669795 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGAAGGTTGGCTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAATAAACTAAAAGTATCTGTCAACTTTCAAGAAATAA---GCTTTTG-TT------AAAAATCAGTATTTATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAACATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAGTATTTTCTCTCAAATTCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134273860 316 + 135778131 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCATAAAGC---TTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACTAAAAGTATCTGTCAACTTTCAAGCAATAA---GCTTTTG-TT------AAAAATCAATATTTATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAGTCAGTATTTTCTCTCaaattctg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2711752 319 - 2847728 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGAAGGTTGGCTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAATAAACTAAAAGTATCTGTCAACTTTCAAGAAATAA---GCTTTTG-TT------AAAAATCAATATTTATTAAAGCAAA-TGTCATTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATAAATCAGTATTTTCTCTCAAATTCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833555 319 + 2368649 TGCTTGTTTCTGACTTTGTTAGTCTTCATAATATTCCTTTCAGGAGGTTGGCTGTATTTATAGTTATTTGAATTTTGCCAATGTTTTCTTTCCACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACTAAAAGTATCTGTCAATTTTCAAGCAATAA---GCTTTTG-TT------AAAAATCAATATTTATTAAAGCAAA-TGTCACTTGAAAATTCAAGCAATGTATAACTTGCAAACATTTCATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTGGGTCAAGATAATGAATCAGTATTTTCTCTCAAATTCTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189585697 309 - 190850796 TGCTTGTTTCTTACGGTGTTAGTCTTCATAATATTCATTTCAGGAGGTTGGATGTATTTATAGTTAATTGAATTTTGCCATTGTTTTCTTTCAACAAAGC---TTGTTGT-ATTTAATTG-TCTTTAAGAAAAGATACTAAAAGTATCTCTCAACTTTCAAGCAATAAAATGCTTTTG-TT-------AAGATCAATATTTACTAAAACG----------TGAAAATTTAAGCAATATATAACTTGCAAACATTTGATTAAAATAGTTTCAGTAATATATTTTTAGCTTGAGTAAGTCAAGATAGTAAATCAATATTTTCTCTCAAATTCTG i calJac3.chr3 I 297 C 0 s saiBol1.JH378165 13069275 317 - 14256875 TGCTGATTTCTTATGTTGTTAGTCTTCATAATAGTCATTTCAGGAGGTTGGCTGTATT--TAGTTAATTGAATTTTGCCATTGTTTTCTTTCAACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACTAAAAGTTTCTGTCAACTTTCAAGGGATAAAATGCTTTTG-TT-------AAAATCAATATTTACTAAAACA---TGTCATTTGAAAATTTAAGCAATATATAACTTACAAACATTTGATTAAAATGGTTTCAGTAATATATTTTTAGCTTGAGTAGGTCAAGATAGTAAATCAATATTTTCTCTCAAATTCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 960942 319 - 2196201 TACTTGTTTCTTACTTTATTAGTCTTCATAATATTCATTTCAGGAGGTTGGCTGTATTTATAGTTAATTGAATTTTGCCATTGTTTTCTTTCAACAAAGCTTGTTGTTGT-ATTTAATTG-TCTTTAAGAAAAGAAACTAAAAGTTTCTGTCAACTTTCAAGCAATAAAATGCTTTTG-TT-------AAAATCAATATTTACTAAAGCA---TGTCATTTGAAATTTTAAGCAATATATAACTTGCAAACATTTGATTAAAATAGTTTCAGTAATATACTTTTAGCTTGAGTAGGTCAAGGTAGTAAATCAATATTTTCTCTCAAATTCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357153 316 - 5030052 TGCTTGCTTCTTACATTGTTAGTCTTCATAATATTCATTTCAGGAGGTTGGCTGTATTCATAGTTAATTGAATTTCGCCATTGTTTTCTTTCAACAAAGC---TTGTTGT-ATTTAATTG-TTTTTAAGAAAAGAAACTAAAAGTATCTGTCAACTTTCAAGCAATAAAATGCTTTTG-TT-------AAGATCGATATTTACTAAAATA---TGTCATTTGAAAATTTAAGCAATACATAACTTGCAAACATTTGATTAAATTAGTTTCAGTAATATATTTTTAGCCTGAGTAGGTCAAGATAGTAAATCAATATTTTCTCTCAAATTCTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480411 318 - 93316391 TACTTGTTTCTTATTTGGTTAATCTTCACAATATTAATTG-GGGAGGCTTTTGATTTTTATAGTTAAGTGAATTTTACCAATGTTTTATTTTGACAAACCTTGCTAGTGTAATTTAATTG-TCTTTAAGGAAAGAGACTAAAAGTATCTCTCAACTTTCAAG---TAAAATGCTTTTG-TT-------AAAATCAATACTTATTAAAGCAAA-CATCTTTTGAAAATTTAAGCCATGTATGACTTACAAACATTTGATTAAAATAGTTTCAATAATGGATATTTAGCTTGAAGATTTCAAGATGATAATTCAATATAGTCTCTCAAATTCTG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901147 304 + 3993831 TGTTTGTTTCTTAATTGGTTAATCTTCACAACATTAATTTCAGGAGGCTTTCCATTTTTATAGTTGAGTGAATTTTACGAATGTTTTATTTTGACAAAGCCTGTTAGTGT-ATTTAATTG-TCTTTAAGGAAAGAAACTAAAAGTATCTGTCAACTTTCAAG---TAAAATGCCTTTGCCT-------AAAATCAATACTTATTAAAGCAAG-CATCTTTTGAAAATTCAATCAATCTATAATTTGCAAACATTTG---------------ATAATGGATATTTAGCTTGAAGATTTCAAGATGATAAATCAATATTTCCTCTCAAATTCTG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11201591 316 - 11315646 TGCTTGTTTCTTACTTGGTTAATCATCATAATGTTAATTTCAGGAGGCTTTGCATGTTTATAGATAAATGAAGCTTACCAATGTTTTATTTTGACAAAGCTTGCTGTTAT-ATTTAATTG-TCTTTAAAGAAAGAAGCTAAAAGTATC-GTCAACTTCCAAG---TAAAATGCTTTTA-TT-------AAGAT-AATACTTATTAAAGCAAA-TATCTTTTGGAAATTCGAACAATCTATAAATTGCAAACATTTGGTTAAAATAGTTTCAATAATAGATGTTTAGCTTGAGGACTTCAAGATGAAACATCAATATTTTCTCTGAAATTTTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86535287 310 - 129401213 TGCTTTTATCG---TTTGCTTGTCTTTGTCATATTAATTTCAGGGGCTTTCTCATATTTGTACTTAATTCACTTTTACTAGTTTTTTCTTTCAACAAACCCTGCTGTTGC-ACATAATTG-TTTTTAAGGAAAGAAA----------ATGCCACCTTC--AGTACTCCAATGCTTTTG-TTAAAAAAAAAAATCAATCTTTATTTAATCAGA-CATCATTTGAAAAACCCA-TAACACATAACTTAGAAACATTTGGTTAAAATAGTTTCAATGGTAGAT-TTTGGCATAAGTATTTCAAGACAATAAGTCAGTATTTG-TCTCAAATCCTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16905682 283 - 59632846 TTCTTGTTTCTTAGTTTGTAAATTTCCATAATATTAATTTCAGGAGGCTTGC--------CAGTAAATTCAATTTTGCC--TGTTTTCTGTCAACAAAACTTTCTATTTA-ATTTAATCG-TCTTTAAGAAAAGAAACTAGGAGTGTCTTACAACTTTCAACATATAA--TGTTTTTG-TT-------AAAATCAATCTTTATCAAAGCAAA-TATCatttaaaattct-------------tttgtaaa--------taaaatagtttaaataatgtatttttaaatGGAACATCTCATAACG-----TCAATAGTTTCTCTCAAATTCTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406078 322 - 2520184 TATTTGATTCTTACTTTGTTAGTCTCCATAATATTAATTTTAGAACACCTGCCATTTTGGGGGTTGATTCAATTTTGCCAATGTTTTCTTTCAACAAAGTTTGTAATTGA-ATTTAATTGTTTTTTAAGAAAATAAATTAGAAGTGGCTGTCAACTTACAAGTAATACAATACTTTAG-TT-------AAAACCAAGCTATGTTAAAGAAACTTATCCTTGAAAAATGCAAGCAACTTA-AATGCACAAACATTTGTTTAAAATATTTTTAGTAATGGATTTTTAGCTTGAATATTTCAAGATCACAAATCAATATTTTCTCTCAAATTCTG i dasNov3.JH570353 C 0 C 0 a score=60501.000000 s hg38.chr4_KI270789v1_alt 69503 3 + 205944 ATA s panTro5.chr4 192861162 3 + 194502333 ATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744881 3 + 195804263 ATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781464 3 + 4876863 ATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666818 3 + 115148730 ATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188950376 3 + 190429646 ATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899193 3 + 189454096 ATA i macFas5.chr5 I 1365 C 0 s macNem1.NW_012013133v1 24275774 3 - 25927173 ATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3314987 3 + 4669795 ATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134274176 3 + 135778131 ata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2712071 3 - 2847728 ATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 833874 3 + 2368649 ATA i colAng1.NW_012116221v1 C 0 I 1442 s calJac3.chr3 189586006 3 - 190850796 ATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069592 3 - 14256875 ATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961261 3 - 2196201 ATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357469 3 - 5030052 ATA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480729 3 - 93316391 ACA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901451 3 + 3993831 ATA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11201907 3 - 11315646 ATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86535597 3 - 129401213 ATA i mm10.chr8 C 0 I 2 s canFam3.chr16 16905965 3 - 59632846 ATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406400 3 - 2520184 ATA i dasNov3.JH570353 C 0 C 0 a score=19110.000000 s hg38.chr4_KI270789v1_alt 69506 1 + 205944 A s panTro5.chr4 192861165 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744884 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781467 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666821 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188950379 1 + 190429646 A i rheMac8.chr5 C 0 I 1371 s macFas5.chr5 187899196 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24275777 1 - 25927173 A i macNem1.NW_012013133v1 C 0 I 1420 s cerAty1.NW_012001672v1 3314990 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 I 1379 s chlSab2.chr7 134274179 1 + 135778131 a i chlSab2.chr7 C 0 I 1433 s manLeu1.NW_012102221v1 2712074 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 I 1380 s calJac3.chr3 189586009 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069595 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961264 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357472 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480732 1 - 93316391 A i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901454 1 + 3993831 A i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11201910 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86535602 1 - 129401213 A i mm10.chr8 I 2 C 0 s canFam3.chr16 16905968 1 - 59632846 A i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1406403 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 833877 1442 + 2368649 I a score=-5988.000000 s hg38.chr4_KI270789v1_alt 69507 2 + 205944 CG- s panTro5.chr4 192861166 2 + 194502333 CG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744885 2 + 195804263 CG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781468 2 + 4876863 TG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666822 2 + 115148730 CA- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187899197 2 + 189454096 TG- i macFas5.chr5 C 0 I 2 s calJac3.chr3 189586010 2 - 190850796 CA- i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13069596 2 - 14256875 CA- i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 961265 2 - 2196201 CA- i cebCap1.NW_016107886v1 C 0 I 2 s aotNan1.NW_018492112v1 3357473 2 - 5030052 TG- i aotNan1.NW_018492112v1 C 0 I 2 s micMur3.chr14 17480733 2 - 93316391 CA- i micMur3.chr14 C 0 I 2 s proCoq1.NW_012145301v1 3901455 2 + 3993831 CA- i proCoq1.NW_012145301v1 C 0 I 2 s otoGar3.GL873580 11201911 2 - 11315646 CA- i otoGar3.GL873580 C 0 I 2 s mm10.chr8 86535603 2 - 129401213 TA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16905970 1 - 59632846 T-- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1406404 2 - 2520184 -AA i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 833877 1442 + 2368649 I e manLeu1.NW_012102221v1 2712075 1380 - 2847728 I e chlSab2.chr7 134274180 1433 + 135778131 I e cerAty1.NW_012001672v1 3314991 1379 + 4669795 I e macNem1.NW_012013133v1 24275778 1420 - 25927173 I e rheMac8.chr5 188950380 1371 + 190429646 I a score=380544.000000 s hg38.chr4_KI270789v1_alt 69509 31 + 205944 --TGTAAA---AAA---GTTCTTTGAAACAATAATAAAA s panTro5.chr4 192861168 31 + 194502333 --TGTAAA---AAA---GTTCTTTGAAACAATAATAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744887 31 + 195804263 --TGTAAA---AAA---GTTCTTTGAAACAATAATAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781470 31 + 4876863 --TGTAAA---AAA---GTTCTTTGAAACAATAATAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666824 31 + 115148730 --TGTTAA---AAA---GTTCTTTGAAACAATAATAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951751 31 + 190429646 --TGTAGA---AAA---GTTCTTCGAAATGATAATGAAA i rheMac8.chr5 I 1371 C 0 s macFas5.chr5 187899201 31 + 189454096 --TGTAGA---AAA---GTTCTTCGAAATGATAATGAAA i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24277198 31 - 25927173 --TGTAGA---AAA---GTTCTTCGAAATGATAATGAAA i macNem1.NW_012013133v1 I 1420 C 0 s cerAty1.NW_012001672v1 3316370 31 + 4669795 --TGTAGA---AAA---GTTCTTCAAAACGATAATGAAA i cerAty1.NW_012001672v1 I 1379 C 0 s chlSab2.chr7 134275613 31 + 135778131 --TGTAGA---AAA---GTTCTTTGAAACGATAATGAAA i chlSab2.chr7 I 1433 C 0 s manLeu1.NW_012102221v1 2713455 31 - 2847728 --TGTAGA---AAA---GTTCTTCAAAACGATAATAAAA i manLeu1.NW_012102221v1 I 1380 C 0 s colAng1.NW_012116221v1 835319 31 + 2368649 --TGTAGA---AAA---GTTCTTTGAAACGATAATGAAC i colAng1.NW_012116221v1 I 1442 C 0 s calJac3.chr3 189586014 31 - 190850796 --TGTAAA---ACA---GTTTTTCACAACAATAATAAAA i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13069600 31 - 14256875 --TGTAAA---AAG---GTTTTTCAAAACACTAATAAAA i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 961269 31 - 2196201 --TGTAAA---AAA---GGTTTTCAAAACAATAATAAAA i cebCap1.NW_016107886v1 I 2 C 0 s aotNan1.NW_018492112v1 3357477 31 - 5030052 --TATAAA---AAA---GTTTTTCAAAACAATAATAAAA i aotNan1.NW_018492112v1 I 2 C 0 s micMur3.chr14 17480737 31 - 93316391 --TGTTAA---AAA---TGTTCTTTAAACAATAATAAAA i micMur3.chr14 I 2 C 0 s proCoq1.NW_012145301v1 3901459 31 + 3993831 --TGTTAA---AAA---TGTTCTTTAAACAATAATAAAA i proCoq1.NW_012145301v1 I 2 C 0 s otoGar3.GL873580 11201915 31 - 11315646 --TGTTAA---AAA---AGTCCTTTAAACAATCATAAAA i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86535605 29 - 129401213 --TGTAAAAAGAAA---GTTCTT-----CAATGATAAAA i mm10.chr8 C 0 I 1077 s canFam3.chr16 16905971 34 - 59632846 --TATATA---AAATATGTCCTTCAAAACAATAATGAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406406 16 - 2520184 TAGGTAAA---AAA---TGCTT----------------- i dasNov3.JH570353 C 0 C 0 a score=115922.000000 s hg38.chr4_KI270789v1_alt 69540 7 + 205944 CTTAAGA s panTro5.chr4 192861199 7 + 194502333 CTTAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744918 7 + 195804263 CTTAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781501 7 + 4876863 CTTAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666855 7 + 115148730 CTTAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951782 7 + 190429646 TTTAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899232 7 + 189454096 TTTAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277229 7 - 25927173 TTTAAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316401 7 + 4669795 CTTAAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275644 7 + 135778131 CTTAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713486 7 - 2847728 CTTAAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835350 7 + 2368649 CTTAAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586045 7 - 190850796 CTTAAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069631 7 - 14256875 CTTAAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961300 7 - 2196201 CTTAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357508 7 - 5030052 CTTAAGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480768 7 - 93316391 CTTAAGA i micMur3.chr14 C 0 I 53 s proCoq1.NW_012145301v1 3901490 7 + 3993831 CTTAAGA i proCoq1.NW_012145301v1 C 0 I 1 s otoGar3.GL873580 11201946 7 - 11315646 CTTAAGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16906005 7 - 59632846 CTTAAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406422 3 - 2520184 ----AGA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86535634 1077 - 129401213 I a score=316992.000000 s hg38.chr4_KI270789v1_alt 69547 30 + 205944 AAAAGCAGTCAG-TAAAGCTACTGATGATTC s panTro5.chr4 192861206 30 + 194502333 GAAAGCAGTCAG-TAAAGCTACTGCTGATTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744925 30 + 195804263 AAAAGCAGTCAG-TAAAGCTACTGCTGATTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781508 30 + 4876863 AAAAGCAGTCAG-TAAAGCTACTGATGATTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666862 30 + 115148730 AAAAGCAGTCAG-TAAAGCTACTGATGATTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951789 24 + 190429646 AAAAGCAGTTAA-------TACTGATGAGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899239 24 + 189454096 AAAAGCAGTTAA-------TACTGATGAGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277236 24 - 25927173 AAAAGCAGTTAA-------TACTGATGAGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316408 31 + 4669795 AAAAGCAGTCAGTTAAACTTACTGATGCGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275651 31 + 135778131 AAAAGCAGTCAGTTAAACCTACTGATGAGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713493 31 - 2847728 AAAAGCAGTCAGTTAAACTTACTGATGAGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835357 31 + 2368649 AAAAGCAGTCAGTTAAACCTACTGATGAGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586052 30 - 190850796 AAACGCAGTCAG-TAAAGCTGCCGATGATTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069638 30 - 14256875 AATGGCAGTCAG-TAAAGCTATTGATGATTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961307 27 - 2196201 A---GCAGTCAG-TAAAGCTACTGATGATTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357515 30 - 5030052 AAAAGCAGTCAG-TAAAGCTACTGATGATTC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3901498 30 + 3993831 AAGAGCAATCGA-TAAAGCTACTGATGACTC i proCoq1.NW_012145301v1 I 1 C 0 s otoGar3.GL873580 11201953 30 - 11315646 AAAAGCAATCAG-TTAAACTACTGATGACTC i otoGar3.GL873580 C 0 T 1936 s canFam3.chr16 16906012 30 - 59632846 AAAAGCTGTTAA-TAGAACTATGGATGACTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406425 30 - 2520184 AAAAGCAGTCAA-TAAACCTATTGATCACTC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17480775 53 - 93316391 I e mm10.chr8 86535634 1077 - 129401213 I a score=15561.000000 s hg38.chr4_KI270789v1_alt 69577 1 + 205944 T s panTro5.chr4 192861236 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744955 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781538 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666892 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951813 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899263 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277260 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316439 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275682 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713524 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835388 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586082 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069668 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961334 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357545 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3901528 1 + 3993831 T i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16906042 1 - 59632846 T i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1406455 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17480775 53 - 93316391 I e mm10.chr8 86535634 1077 - 129401213 I e otoGar3.GL873580 11201983 1936 - 11315646 T a score=22485.000000 s hg38.chr4_KI270789v1_alt 69578 2 + 205944 TT s panTro5.chr4 192861237 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744956 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781539 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666893 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951814 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899264 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277261 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316440 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275683 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713525 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835389 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586083 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069669 2 - 14256875 TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961335 2 - 2196201 TT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357546 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3901529 2 + 3993831 TT i proCoq1.NW_012145301v1 C 0 I 19 s otoGar3.GL873580 11200047 2 - 11315646 TC i otoGar3.GL873580 T 1936 C 0 s canFam3.chr16 16906044 1 - 59632846 T- i canFam3.chr16 I 1 I 2 s dasNov3.JH570353 1406456 2 - 2520184 TT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17480775 53 - 93316391 I e mm10.chr8 86535634 1077 - 129401213 I a score=394450.000000 s hg38.chr4_KI270789v1_alt 69580 38 + 205944 ATTTCCTTTTATGAGATAA----------------------------------TCAGTCTTTTGACTTCAGC s panTro5.chr4 192861239 38 + 194502333 ATTTCCTTTTAGGATATAA----------------------------------TCAGTCTTTTGACTTCAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744958 38 + 195804263 ATTTCCTTTTAGGATATAA----------------------------------TCAGTCTTTTGACTTCAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781541 38 + 4876863 ATTTCCTTTTAGGATATAA----------------------------------TCAGTCTTTTGACTTCAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666895 38 + 115148730 ATTTCCTTTTAGGATATAA----------------------------------TCAGTCTTCTGACTTAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951816 38 + 190429646 ATTTCCTTTTAGGACATAA----------------------------------TCGGTTTTTTGACTTCAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899266 38 + 189454096 ATTTCCTTTTAGGACATAA----------------------------------TCGGTTTTTTGACTTCAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277263 38 - 25927173 ATTTCCTTTTAGGACATAA----------------------------------TCGGTTTTTTGACTTCAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316442 38 + 4669795 ATTTCCTTTTAGGACATAA----------------------------------TCAGTTTTTTGACTTCACC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275685 38 + 135778131 ATTTCTTTTTAGGACATAA----------------------------------TCAGTTTTTTGACTTCAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713527 38 - 2847728 ATTTCCTTTTAGGACATAA----------------------------------TCAGTTTTTTGACTTCAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835391 38 + 2368649 ATTTCCTTTTAGGACACAA----------------------------------TCAGTTTTTTGACTTCAAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586085 38 - 190850796 ATTTCATTTTAGGACACGA----------------------------------TCAGTTTTTTGACTTCAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069671 38 - 14256875 ATTTCCTTTTAGGACATAG----------------------------------TCAGTCTTTTGACTTCAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961337 38 - 2196201 ATTTCCTTTTAGGACATAA----------------------------------TCAGTCTTTTGACATCACC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357548 38 - 5030052 ATTTCCTTTTAGGACATAA----------------------------------TCAGTCTTTTGACTTCAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11200049 38 - 11315646 ATTTCCTTCTAGGTCGTAA----------------------------------TCTGTCTTTGAGCTCTGGC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16906047 72 - 59632846 CTTTAAGTTTAATATAGAAACAAGGTCCAggggtgcctgggtggctcagatggttaagcatctgccttcagc i canFam3.chr16 I 2 T 1613 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e dasNov3.JH570353 1406458 0 - 2520184 C e mm10.chr8 86535634 1077 - 129401213 I a score=232131.000000 s hg38.chr4_KI270789v1_alt 69618 22 + 205944 ATTTTAAAATTAAAAATACCTT s panTro5.chr4 192861277 22 + 194502333 ATTTTAAAATTAAAAATACCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192744996 22 + 195804263 ATTTTAAAATTAAAAATACCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781579 22 + 4876863 ATTTTAAAATTAAAAATACCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666933 22 + 115148730 ATTTTAAAATTAAAAATACCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951854 22 + 190429646 ATTTTGAAATTAAAAATACTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899304 22 + 189454096 ATTTTGAAATTAAAAATACTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277301 22 - 25927173 ATTTTGAAATTAAAAATACTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316480 22 + 4669795 ATTTTGAAATTAAAAATACCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275723 22 + 135778131 ATTTTGAAATTAAAAATACCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713565 22 - 2847728 ATTTTGAAATTAAAAATACCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835429 22 + 2368649 ATTTTGAAATCAAAAATACCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586123 21 - 190850796 ATTTTAAAATAAAAAGTG-TTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069709 21 - 14256875 attttaaaattaaaaata-ttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961375 21 - 2196201 ATTTTAAAATTAAAAATA-TTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357586 21 - 5030052 ATTTTAAAATTAAAAACA-TTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11200087 22 - 11315646 ATTTTAAAATTAGAAAGACCTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16904506 22 - 59632846 CTTTTAAAATTATAAATAGCTT i canFam3.chr16 T 1613 I 1 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e dasNov3.JH570353 1406458 0 - 2520184 C e mm10.chr8 86535634 1077 - 129401213 I a score=12376.000000 s hg38.chr4_KI270789v1_alt 69640 1 + 205944 T s panTro5.chr4 192861299 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745018 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781601 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666955 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951876 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899326 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277323 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316502 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275745 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713587 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835451 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586144 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069730 1 - 14256875 t i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961396 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357607 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16904529 1 - 59632846 T i canFam3.chr16 I 1 C 0 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e dasNov3.JH570353 1406458 0 - 2520184 C e mm10.chr8 86535634 1077 - 129401213 I e otoGar3.GL873580 11200109 0 - 11315646 C a score=982814.000000 s hg38.chr4_KI270789v1_alt 69641 107 + 205944 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCAAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA s panTro5.chr4 192861300 107 + 194502333 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCAAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745019 107 + 195804263 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCAAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781602 107 + 4876863 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCAAGAAAGTTCTGCTCTTAGGAATTAGATTAACTAATGA-TA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112666956 107 + 115148730 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCAAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951877 103 + 190429646 GATAGGATATTTCTTTA-------ACTGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTACATTTGTCGTCAGTACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899327 103 + 189454096 GATAGGATATTTCTTTA-------ACTGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTACATTTGTCGTCAGTACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277324 99 - 25927173 GATAGGATATTTCTT-----------TGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTACATTTGTCGTCAGTACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316503 99 + 4669795 GATAGGATATTTCAC-----------TGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTTTATTTGTCTTCAGGACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275746 103 + 135778131 GATAGGATATTTCTTTC-------ACTGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTGTATTTGTCTTCAGTACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713588 99 - 2847728 GATAGGATA----TTTC-------ACTGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-TA-TTTTTTGTTAAATCCTTTTATTTGTCTTCAGTACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835452 103 + 2368649 GATAGGATTTTTCTTTC-------ACTGTTAATTTCTCCAACAAAGTTCTGCTCTTTGTAATTAGAT----TAATGA-CA-TTTTTTGTTAAATCCTTATATTTGTCTTCAGTACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586145 99 - 190850796 GATAGAATATTCCTTTC-------ACCATTAATTTCTCCTAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTCAAATTCT--------CCTTCAGTGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069731 108 - 14256875 GATAGAATAATCCTTTC-------ACTGTTAATTTCTTCTAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGATTT-TTTTTTGTCAAATTCTTCTATTTGCCTTCGGTATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961397 107 - 2196201 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCTAGAAATTTCTGCTCTTTGGAATTAGATTAACTAATGA-TT-TTTTTTGTCAAATTCTTCTATTTGCCTTCAGTATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357608 107 - 5030052 GATAGAATATTCCTTTC-------ACTGTTAATTTCTCCTAGAAAGTTCTGCTCTTTGGAATTAGATTAACTAATGA-TA-TTTTTTGTCAAATTCTTCTATTTGCCTTCAATATA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11200109 105 - 11315646 AAGGAAATATTTCTTTG-------ATTGTTAGATTTTCCAAGAAAGTTCTACTCTTTGGAATCAGGTTACCTAATGA----TTTGTTGTGAAATTCTTATGTTTATCTTTGGTGCA i otoGar3.GL873580 C 0 I 1773 s canFam3.chr16 16904530 115 - 59632846 CAAAAAATACTCATTTTTAAAAAAATTTTCAGTTTCTCAAAGAAAATTCTGCTCTTTGGAGTCAGATTAACTGATTC-TATTTTTTTTTTAAGTCTTTATATTTGTTTTTGGTGTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406458 8 - 2520184 --------------------------TGTTGATC---------------------------------------------------------------------------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e mm10.chr8 86535634 1077 - 129401213 I a score=27149.000000 s hg38.chr4_KI270789v1_alt 69748 2 + 205944 TC s panTro5.chr4 192861407 2 + 194502333 TC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745126 2 + 195804263 TC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781709 2 + 4876863 TC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667063 2 + 115148730 TC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951980 2 + 190429646 TC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899430 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277423 2 - 25927173 TC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316602 2 + 4669795 TC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275849 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713687 2 - 2847728 TC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835555 2 + 2368649 TC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586244 2 - 190850796 TC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069839 2 - 14256875 TC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961504 2 - 2196201 TC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357715 2 - 5030052 CC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11201987 2 - 11315646 TC i otoGar3.GL873580 I 1773 C 0 s canFam3.chr16 16904645 2 - 59632846 TC i canFam3.chr16 C 0 I 1610 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e dasNov3.JH570353 1406466 0 - 2520184 C e mm10.chr8 86535634 1077 - 129401213 I a score=79253.000000 s hg38.chr4_KI270789v1_alt 69750 12 + 205944 CTAGTAGACTT--G s panTro5.chr4 192861409 12 + 194502333 CTAGGAGACTT--G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745128 12 + 195804263 CTAGTAGACTT--G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781711 12 + 4876863 CTAGTAGACTT--G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667065 12 + 115148730 CTAGTAGACTT--G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951982 14 + 190429646 GTAGTAGACTTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899432 14 + 189454096 GTAGTAGACTTAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277425 14 - 25927173 GTAGTAGACTTAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316604 14 + 4669795 CTAGTAGACTTAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275851 14 + 135778131 CTAGTAGACTTAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713689 14 - 2847728 CTAGTAGACTTAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835557 14 + 2368649 CTAGTAGACTTAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586246 14 - 190850796 CTGGTAGACTTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069841 14 - 14256875 CTGGTAGACTTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961506 14 - 2196201 CTGGTAGACTTTAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357717 14 - 5030052 CTGGTAGACTTTGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11201989 14 - 11315646 CTAGTTGAGCTCCA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1406466 4 - 2520184 CTAA---------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901531 19 + 3993831 I e micMur3.chr14 17480775 53 - 93316391 I e canFam3.chr16 16904647 1610 - 59632846 I e mm10.chr8 86535634 1077 - 129401213 I a score=138733.000000 s hg38.chr4_KI270789v1_alt 69762 9 + 205944 TTTAGATAG s panTro5.chr4 192861421 9 + 194502333 TTTAGATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745140 9 + 195804263 TTTAGATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781723 9 + 4876863 TTTAGATAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667077 9 + 115148730 TTTAGAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188951996 9 + 190429646 TTTAGAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899446 9 + 189454096 TTTAGAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277439 9 - 25927173 TTTAGAAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316618 9 + 4669795 TTTAGAAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275865 9 + 135778131 TTTAGAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713703 9 - 2847728 TTTAGAAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835571 9 + 2368649 TTTAGAAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586260 9 - 190850796 TTTAGAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069855 9 - 14256875 TTTAGAAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961520 9 - 2196201 TTTAGAAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357731 9 - 5030052 TTTAGAAAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480828 9 - 93316391 TTTAGAAAG i micMur3.chr14 I 53 C 0 s proCoq1.NW_012145301v1 3901550 9 + 3993831 TTTAGAAAG i proCoq1.NW_012145301v1 I 19 C 0 s otoGar3.GL873580 11202003 9 - 11315646 CTTAGAAAG i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1406470 9 - 2520184 TTTAGAAAG i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16904647 1610 - 59632846 I e mm10.chr8 86535634 1077 - 129401213 I a score=144947.000000 s hg38.chr4_KI270789v1_alt 69771 11 + 205944 CAGACCCAAGA s panTro5.chr4 192861430 11 + 194502333 CAGACCCAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745149 11 + 195804263 CAGACCCAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781732 10 + 4876863 CAGA-CCAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667086 11 + 115148730 CAGACCCGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952005 11 + 190429646 CAGATCCAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899455 11 + 189454096 CAGATCCAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277448 11 - 25927173 CAGATCCAAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316627 11 + 4669795 CAGATCCAAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275874 11 + 135778131 CAGATCCAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713712 11 - 2847728 CAGATCCAAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835580 11 + 2368649 CAGTTCCAAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586269 11 - 190850796 CACCTCCAAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069864 11 - 14256875 CACATCCAAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961529 11 - 2196201 CACATCCAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357740 11 - 5030052 CACATCCCAGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480837 11 - 93316391 CAGATCCAAGA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901559 11 + 3993831 CAGATCCAAGA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11202012 11 - 11315646 CAAATCTAAGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16906257 11 - 59632846 AAGGTCCAATG i canFam3.chr16 I 1610 C 0 s dasNov3.JH570353 1406479 11 - 2520184 CAGATTCAATA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86535634 1077 - 129401213 I a score=1073387.000000 s hg38.chr4_KI270789v1_alt 69782 69 + 205944 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATAGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATGCTTTCTT s panTro5.chr4 192861441 69 + 194502333 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATAGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATGCTTTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745160 69 + 195804263 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATAGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATGCTTTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781742 68 + 4876863 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATAGAGGATTCT-AA----TT--------------TTCTTAAG--AAAATGCTTTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667097 69 + 115148730 GTGAAATTCAAATAATTAGCAGGAATGGAAA-ATAGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAGTGCTTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952016 71 + 190429646 GTTAAATTCGAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TAT--------------TTTTTAAGAAAAAATGCTTTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899466 71 + 189454096 GTTAAATTCGAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TAT--------------TTTTTAAGAAAAAATGCTTTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277459 71 - 25927173 GTTAAATTCGAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TAT--------------TTTTTAAGAAAAAATGCTTTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316638 71 + 4669795 GTTAAATTCAAATAATTAGCAGAAATGGAAA-ATGGAGAATTCT-AA---TTT--------------TTCTTAAGAAAAAATGCTTTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275885 71 + 135778131 GTTAAATTCCAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TTT--------------TTCTTAAGAAAAAATGCGTTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713723 71 - 2847728 GTTAAATTCAAATAATTAGCAGAAATGGAAA-ATGGAGAATTCT-AA---TTT--------------TTCTCAAGAAAAAATGCTTTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835591 71 + 2368649 GTTAAATTCGAATAATTAGCAGGAATGGAAA-ATGGAAGATTCT-AA---ATT--------------TTCTTAACAAAAAATGCTTTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586280 69 - 190850796 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---CTT--------------TTCTAAAG--AAAATGCTTTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069875 69 - 14256875 GTTAAATCCAAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATGCTTTCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961540 69 - 2196201 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATGCTTTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357751 69 - 5030052 GTTAAATTCAAATAATTAGCAGGAATGGAAA-ATGGAGGATTCT-AA---TTT--------------TTCTTAAG--AAAATACTTTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480848 69 - 93316391 ATTAAATTCAAATAACTAGCAGGAATAGAAA-ATGGAAGATTTT-AA---TTT--------------TTTTCAAG--AAAATGCTTTCTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901570 69 + 3993831 ATTAAATTCAAATAACTAGCAGGAATAGAAA-ATGGAAGATTTT-AA---TTT--------------TTCTCAAG--AAAATGCTTTCTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11202023 83 - 11315646 ATTAAATTCAAATAACCAGCAGGAATAGAAA-ATGGAGGTTTTT-AA---TTTTTCTGAAGAAAAAATTCTGAAG--AAAATTCTTTCTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86536711 71 - 129401213 GTTAAATTCAAATAATTAGGATAAATA-AAA-GTGGAGAATTTT-AACTTTTT--------------TTTTCAAA--TGAATTCTttttt i mm10.chr8 I 1077 I 6439 s canFam3.chr16 16906268 70 - 59632846 GTGAAATCCAAATAATTAGCATAAATTAAAATAAATAGAGTTTT-AA---TTT--------------TTCTCAAG--AAATTATTATTTT i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1406490 67 - 2520184 GGTAAATTCAAATTATTAGAAGAAATAAAAT-ATGGAGGACTGTCAA---CTT--------------TTTATAAG--AAAATATTTT--- i dasNov3.JH570353 C 0 C 0 a score=290944.000000 s hg38.chr4_KI270789v1_alt 69851 21 + 205944 ATCATTGGC-AAAAGAATGAGT s panTro5.chr4 192861510 21 + 194502333 ATCATTGGC-AAAAGAATGAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745229 21 + 195804263 ATCATTGGC-AAAAGAATGAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781810 21 + 4876863 ATCATTGGC-AAAAGAATGAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667166 21 + 115148730 ATCATTGGC-AAAACAATGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952087 21 + 190429646 ATCATTGAG-GAAACAATGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899537 21 + 189454096 ATCATTGAG-GAAACAATGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277530 21 - 25927173 ATCATTGAG-AAAAGAATGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316709 21 + 4669795 ATCATTGGC-AAAACAATGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275956 22 + 135778131 ATCATTGGCAAAAACAACGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713794 21 - 2847728 ATCATTGGC-AAAACAATGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835662 21 + 2368649 ATCATTGGC-AAAACAATGAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586349 21 - 190850796 ATCATTGGC-AAAACAATGAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069944 21 - 14256875 ATCATTGGC-AAAACAATGAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961609 21 - 2196201 ATCATTGGC-AAAACAATGAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357820 21 - 5030052 ATCATTGGC-AGAACAATGAGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480917 21 - 93316391 ATCAATGGC-AAACCAGTGAGT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901639 21 + 3993831 ATCAATGCC-AAAGCAGTGAGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11202106 21 - 11315646 ATCAATGGC-AAAATGGTGAGT i otoGar3.GL873580 C 0 I 294 s canFam3.chr16 16906341 21 - 59632846 ATCATTAGT-AAAACAGGAAGT i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1406557 18 - 2520184 ATTGTTGGT-AAA---GTGAGT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86536782 6439 - 129401213 I a score=19110.000000 s hg38.chr4_KI270789v1_alt 69872 1 + 205944 T s panTro5.chr4 192861531 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745250 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781831 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667187 1 + 115148730 T i nomLeu3.chr7b C 0 I 303 s rheMac8.chr5 188952108 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899558 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277551 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316730 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275978 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713815 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835683 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586370 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069965 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961630 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357841 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480938 1 - 93316391 T i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901660 1 + 3993831 T i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11202421 1 - 11315646 T i otoGar3.GL873580 I 294 C 0 s canFam3.chr16 16906362 1 - 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406575 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86536782 6439 - 129401213 I a score=277611.000000 s hg38.chr4_KI270789v1_alt 69873 18 + 205944 TATTCACAGACATTTTTA s panTro5.chr4 192861532 18 + 194502333 TATTCACAGACATTTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745251 18 + 195804263 TATTCACAGACATTTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781832 18 + 4876863 TATTCACAGACATTTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667491 18 + 115148730 TATTCAGAGACATTTTTA i nomLeu3.chr7b I 303 C 0 s rheMac8.chr5 188952109 18 + 190429646 TATTCACAGACATTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899559 18 + 189454096 TATTCACAGACATTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277552 18 - 25927173 TATTCACAGACATTTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316731 18 + 4669795 TATTCACAGACATTTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275979 16 + 135778131 TATT--CAGACATTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713816 18 - 2847728 TATTCACAGACATTTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835684 18 + 2368649 TATTCACAGACATTTTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586371 18 - 190850796 TATCCACAGACATTTTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069966 18 - 14256875 TATTCACGGACATTTTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961631 18 - 2196201 TATTCACAGACATTTTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357842 16 - 5030052 TATTCA--GACATTTTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480939 18 - 93316391 CATTCACAGTCATTTGTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3901661 18 + 3993831 CATTCACAGGTATTTTTA i proCoq1.NW_012145301v1 C 0 I 1294 s otoGar3.GL873580 11202422 18 - 11315646 TATTCTCAGGTATATTTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16906363 18 - 59632846 TATTCACAGGCATCTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406576 18 - 2520184 TATTTACAGGCATTTTTA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86536782 6439 - 129401213 I a score=252440.000000 s hg38.chr4_KI270789v1_alt 69891 18 + 205944 TTCCATTATTCTGTGAGT s panTro5.chr4 192861550 18 + 194502333 TTCCATTATTCTGTGAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745269 18 + 195804263 TTCCATTATTCTGTGAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781850 18 + 4876863 TTCCATTATTCTGTGAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667509 18 + 115148730 TTCCATTATTCTGTGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952127 18 + 190429646 TTCCGTTATTCTGTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899577 18 + 189454096 TTCCGTTATTCTGTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277570 18 - 25927173 TTCCGTTATTCTGTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316749 18 + 4669795 TTCCGTTATTCTGTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134275995 18 + 135778131 TTCCGTTATTCTGTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713834 18 - 2847728 TTCCGTTATTCTGTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835702 18 + 2368649 TTCCGTTATTCTGTGGGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586389 18 - 190850796 TTCCACTATTCCGTGAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13069984 18 - 14256875 TTCCACTATTCTGTGAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961649 18 - 2196201 TTCCACTATTCTATGAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357858 18 - 5030052 TTCCATTATTCTGTGAGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17480957 18 - 93316391 TTCCATCATCCTGTGAGT i micMur3.chr14 C 0 I 68 s otoGar3.GL873580 11202440 18 - 11315646 TTCTATCATTCCGTGACT i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16906381 18 - 59632846 TTCTGTTCTTGTGTGAGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406594 18 - 2520184 TTCTATAGTTCCATGTAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e mm10.chr8 86536782 6439 - 129401213 I a score=143211.000000 s hg38.chr4_KI270789v1_alt 69909 20 + 205944 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- s panTro5.chr4 192861568 16 + 194502333 --AAAGA-----AAGAGGAG-------------------------GCA-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745287 16 + 195804263 --AAAGA-----AAGAGGAG-------------------------GCA-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781868 20 + 4876863 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667527 20 + 115148730 --AAAGAAAAG-AAGAGGAG-------------------------GCA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952145 20 + 190429646 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899595 20 + 189454096 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277588 20 - 25927173 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316767 21 + 4669795 --AAAGAAAGGAAAGAGGAG-------------------------GCA-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276013 20 + 135778131 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713852 21 - 2847728 --AAAGAAAGGAAAGAGGAG-------------------------GCA-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835720 20 + 2368649 --AAAGAAAGG-AAGAGGAG-------------------------GCA-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586407 18 - 190850796 --AAAGAAAGG-AAGAGGAG-------------------------G---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13070002 18 - 14256875 --AAAGAAAGG-AAGAGGAG-------------------------G---- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961667 18 - 2196201 --AAAGAAAGG-AAGAGGAG-------------------------G---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357876 18 - 5030052 --AAAGAAAGG-AAGAGGAG-------------------------G---- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202459 20 - 11315646 --AAGAAAAAG-TTTAGAGG-------------------------GCA-- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16906399 44 - 59632846 ---TAAAAAGT-ATTAGGGGTACCATGTTCTCTCTATATATATCTGTA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1406612 24 - 2520184 TAAGAAAAAGT-GGGAGGGG-------------------------GGATA i dasNov3.JH570353 C 0 I 5213 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17480975 68 - 93316391 I e mm10.chr8 86536782 6439 - 129401213 I a score=59296.000000 s hg38.chr4_KI270789v1_alt 69929 9 + 205944 TGTTGA-GGT s panTro5.chr4 192861584 9 + 194502333 TGTTGA-GGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745303 9 + 195804263 TGTTGA-GGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781888 9 + 4876863 TGTTGA-GGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667547 9 + 115148730 TGTTGA-GGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952165 9 + 190429646 TGTTGA-GGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899615 9 + 189454096 TGTTGA-GGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277608 9 - 25927173 TGTTGA-GGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316788 9 + 4669795 TGTTGA-GGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276033 9 + 135778131 TGTTGA-GGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713873 9 - 2847728 TGTTGA-GGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835740 9 + 2368649 TGTTGA-GGT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11202479 10 - 11315646 TATTTAGGGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16906443 9 - 59632846 TGTGTA-AAT i canFam3.chr16 C 0 I 1 e calJac3.chr3 189586425 0 - 190850796 C e cebCap1.NW_016107886v1 961685 0 - 2196201 C e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17480975 68 - 93316391 I e dasNov3.JH570353 1406636 5213 - 2520184 I e mm10.chr8 86536782 6439 - 129401213 I e aotNan1.NW_018492112v1 3357894 0 - 5030052 C e saiBol1.JH378165 13070020 0 - 14256875 C a score=305552.000000 s hg38.chr4_KI270789v1_alt 69938 32 + 205944 TTTCTTTTCCTAATGATG------------TTACATTAATTATT s panTro5.chr4 192861593 32 + 194502333 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745312 32 + 195804263 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781897 32 + 4876863 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667556 32 + 115148730 TTTCTTTTCCTAATGATG------------TTACAGTAATTATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952174 44 + 190429646 TTTCTTTTCCTAATAATGTAATGTAATTCTTTACATTAATTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899624 44 + 189454096 TTTCTTTTCCTAATAATGTAATGTAATTCTTTACATTAATTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277617 32 - 25927173 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316797 32 + 4669795 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276042 32 + 135778131 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713882 32 - 2847728 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835749 32 + 2368649 TTTCTTTTCCTAATGATG------------TTACATTAATTATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586425 32 - 190850796 GTTTGCTCCCTAACGATG------------TTACGTTAATTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13070020 32 - 14256875 GTTTCTTCCCTAATGATG------------TTACATTAATCATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961685 32 - 2196201 GTTTGCTCCCTAATGATG------------CTACATTAATTACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357894 32 - 5030052 GTTTGTTCCCTAATGATG------------CTACATTAATTATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202489 28 - 11315646 TTTTTTCCCCTAATGACA------------TTATATCAGA---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543221 28 - 129401213 TTTTTTTTTTCAATAACA------------TTGTTTCACA---- i mm10.chr8 I 6439 C 0 s canFam3.chr16 16906453 32 - 59632846 TATATTTTCCTAACAACA------------TAAGAGTAGTCTTT i canFam3.chr16 I 1 I 20 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17480975 68 - 93316391 I e dasNov3.JH570353 1406636 5213 - 2520184 I a score=428375.000000 s hg38.chr4_KI270789v1_alt 69970 35 + 205944 GTAGCCAAGATACGCTTTT-GAATACGATACAAAAA s panTro5.chr4 192861625 35 + 194502333 GTAGCCAAGATACGCTTTT-GAATACGATACAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745344 35 + 195804263 GTAGCCAAGATACGCTTTT-GAATACGATACAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781929 35 + 4876863 GTAGCCAAGATACGCTTTT-GAATACGATACAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667588 35 + 115148730 GTTGCCAAGATACGCTTTT-GAATAGGATCCAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952218 35 + 190429646 GTAGCCAACATACGCTTTT-GGATATGATACAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899668 35 + 189454096 GTAGCCAACATACGCTTTT-GGATATGATACAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277649 35 - 25927173 GTAGCCAACATACGCTTTT-GGATATGATACAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316829 35 + 4669795 GTAGCCAACATACGCTTTT-GGATATGATACAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276074 35 + 135778131 GCAGCCAACATACGCTTTT-GGATATGACACAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713914 35 - 2847728 GTAGCCAACATACACTTTT-GGATATGATACAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835781 35 + 2368649 GTAGCCAACATACGCTTTT-GGATATGATACAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586457 35 - 190850796 GCAGCCGAGATAAGCTTTT-GAATACGATACCAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13070052 35 - 14256875 ATAGCCAAGATAGGCTTTT-GAATACCATACCAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961717 34 - 2196201 GTCGCCAAGATATGCTTTT--AATACGATACCAAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3357926 35 - 5030052 GTAGCCAAGATAGGCTTTT-GAATATGATACCAAAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17481043 35 - 93316391 GTAGCCAAGATAGGCTTTT-GAATATGATACAAAAA i micMur3.chr14 I 68 I 3855 s otoGar3.GL873580 11202517 35 - 11315646 GTAACCAAGATATGCTTTG-GAATAAGGCACAGTGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543249 32 - 129401213 GAAGCCAACATACATTTTA-AAATAC---ACAAAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16906505 28 - 59632846 GTAGTCAAGATATTCCTTT-GAATAGAAA------- i canFam3.chr16 I 20 C 0 s dasNov3.JH570353 1411849 36 - 2520184 GCAGGCAAGATATGCTTTTTTGATATGATGGAACAA i dasNov3.JH570353 I 5213 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I a score=308200.000000 s hg38.chr4_KI270789v1_alt 70005 31 + 205944 CATACCTACAATAATGATCATAAAAATATTC- s panTro5.chr4 192861660 31 + 194502333 CATACCTACAATAATGATCATAAAAATATTC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745379 31 + 195804263 CATACCTACAATAATGATCATAAAAATATTC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781964 31 + 4876863 CATACCTACAATAATGATCATAAAAATATTG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667623 31 + 115148730 CATACCTGCAATAATGATCATAAAAATCTTC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952253 31 + 190429646 CATACCTGCAATAATGATCATAAGAATACTC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899703 31 + 189454096 CATACCTGCAATAATGATCATAAGAATACTC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277684 31 - 25927173 CATACCTGCAATAATGGTCATAAGAATACTC- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316864 31 + 4669795 CATACCTGCAATAATAATCATAAGAATACTC- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276109 31 + 135778131 CATACCTGCACTAATGATCATAAGAATACTC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713949 31 - 2847728 CATACCTGCAATAATAATGATAAGAATACTC- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835816 31 + 2368649 CATGCCTGCAGTAATGATCATAAGCATACTC- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586492 31 - 190850796 CATACATGCAATAACGATCATAGAAATATTC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13070087 31 - 14256875 CATACCTGCAATAATGATCATAAAAATATTC- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 961751 31 - 2196201 CATCCCTGCAATAATGATCAGAACAATATTC- i cebCap1.NW_016107886v1 C 0 I 332 s aotNan1.NW_018492112v1 3357961 31 - 5030052 CATACCTGCAGTAATGATCATGAAAATATTC- i aotNan1.NW_018492112v1 C 0 I 332 s otoGar3.GL873580 11202552 29 - 11315646 AATACCTGCAATAATAAT-ACAAAGGTAGT-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543281 15 - 129401213 ----------------GTTTTGGAGATAATT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16906533 31 - 59632846 AGTATATGCAATAATTACTGCAAAAATAGTC- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1411885 31 - 2520184 AGTATCTGCAATATTG-TCACAAAGGTAGTGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I a score=153057.000000 s hg38.chr4_KI270789v1_alt 70036 33 + 205944 CTTTTTCCATCGCTGAAAATTGC-CTTTATTTGA s panTro5.chr4 192861691 33 + 194502333 CTTTTTCCATTGCTGAAAATTGC-CTTTATTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745410 33 + 195804263 CTTTTTCCATTGCTGAAAATTGC-CTTTATTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3781995 33 + 4876863 CTTTTTCCATCGCTCAAAATTGC-CTTTATTTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667654 28 + 115148730 C-TTTTCTATCGCTCAAAATGGC-----GTTTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952284 29 + 190429646 CTTTTTCCATCCCTCAAAATTGC-----TTTTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899734 29 + 189454096 CTTTTTCCATCCCTCAAAATTGC-----TTTTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277715 29 - 25927173 CTTTTTCCATCCCTCAAAATTGC-----TTTTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316895 29 + 4669795 CTTTTTCCATCCCTCAAAATTGC-----CTTTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276140 29 + 135778131 CTTTTTCCATCCCTCAAAATTGC-----CTTTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2713980 29 - 2847728 CTTTTTCCATCCCTCAAAGTTGC-----CTTTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835847 29 + 2368649 CTTTTTCCATCCCTCAAAATTGC-----CTTTGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586523 20 - 190850796 ---TTTCCATCGCTCAAATTTGG----------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13070118 20 - 14256875 ---TTTCCGTCACTCAAATTTGG----------- i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11202581 32 - 11315646 -TTTTCCCATCTTTCAAACTCAT-CTGTATGTGG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543296 24 - 129401213 --------GTCATTCAG--TTGCTCGTTATGTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16906564 27 - 59632846 --GTTTCCACTAGTCAGAATTGT-----CTTTAC i canFam3.chr16 C 0 I 4 s dasNov3.JH570353 1411916 33 - 2520184 CCATCTTCATCATTGAAAATGGA-CTTTATGTGA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 961782 332 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e aotNan1.NW_018492112v1 3357992 332 - 5030052 I a score=112673.000000 s hg38.chr4_KI270789v1_alt 70069 9 + 205944 CAGGATGAT s panTro5.chr4 192861724 9 + 194502333 CAGGATGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745443 9 + 195804263 CAGGATGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782028 9 + 4876863 CAGGATGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667682 9 + 115148730 CAGGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952313 9 + 190429646 CAAGGTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899763 9 + 189454096 CAAGGTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277744 9 - 25927173 CAAGGTGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316924 9 + 4669795 CAAGGTGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276169 9 + 135778131 CAAGATGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714009 9 - 2847728 CAAGGTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835876 9 + 2368649 CAAGATGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586543 9 - 190850796 CAGGATGAt i calJac3.chr3 C 0 I 296 s saiBol1.JH378165 13070138 9 - 14256875 CAGGATGAt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 962114 9 - 2196201 CAGGATGAT i cebCap1.NW_016107886v1 I 332 C 0 s aotNan1.NW_018492112v1 3358324 9 - 5030052 CAGGATGAT i aotNan1.NW_018492112v1 I 332 C 0 s otoGar3.GL873580 11202613 9 - 11315646 CAGAATGAA i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86543320 9 - 129401213 CAGGACAAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16906595 9 - 59632846 CGAGAAAAT i canFam3.chr16 I 4 I 1 s dasNov3.JH570353 1411949 9 - 2520184 CAGGACAAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I a score=48724.000000 s hg38.chr4_KI270789v1_alt 70078 5 + 205944 CTTCT s panTro5.chr4 192861733 5 + 194502333 CTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745452 5 + 195804263 CTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782037 5 + 4876863 CTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667691 5 + 115148730 CTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952322 5 + 190429646 CTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899772 5 + 189454096 CTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277753 5 - 25927173 CTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316933 5 + 4669795 CTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134276178 5 + 135778131 CTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714018 5 - 2847728 CTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 835885 5 + 2368649 CTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586848 5 - 190850796 cTTTT i calJac3.chr3 I 296 C 0 s saiBol1.JH378165 13070147 5 - 14256875 ttttt i saiBol1.JH378165 C 0 I 1574 s cebCap1.NW_016107886v1 962123 5 - 2196201 CTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3358333 5 - 5030052 CGTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202623 5 - 11315646 TTTTT i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86543329 5 - 129401213 ATTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16906605 3 - 59632846 TTT-- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1411958 5 - 2520184 ATTTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I a score=387584.000000 s hg38.chr4_KI270789v1_alt 70083 46 + 205944 ATGCATCTCATCCGACTGTCTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG s panTro5.chr4 192861738 46 + 194502333 ATGCATCTCATCCGACTGTCTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745457 46 + 195804263 ATGCATCTCATCCGACTGTCTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782042 46 + 4876863 ATGCATCTCATCCGACTGTCTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667696 46 + 115148730 ATGCATCTCATCCTACTGTGTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952327 46 + 190429646 GTGTATCTCATCCTACTGTCTGTATTTGCCTTCTGCTT--------------------------------------------------------TGGTGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899777 46 + 189454096 GTGTATCTCATCCTACTGTCTGTATTTGCCTTCTGCTT--------------------------------------------------------TGGTGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277758 46 - 25927173 GTGTATCTCATCCTACTGTCTGTATTTGCCTTCTGCTT--------------------------------------------------------TGGTGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3316938 36 + 4669795 GTGTATCTCATC----------TATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i cerAty1.NW_012001672v1 C 0 I 61 s chlSab2.chr7 134276183 46 + 135778131 GTGTATCTCATCCTACTGTCTGTATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714023 36 - 2847728 GTGTATCTCATC----------TATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i manLeu1.NW_012102221v1 C 0 I 57 s colAng1.NW_012116221v1 835890 46 + 2368649 GTGTATCTCATCTTACTGTCTGCATTTCCCTTCTGCTT--------------------------------------------------------TGGTGGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586853 46 - 190850796 AGGCATCTCATCCTACTGTCTGTATGTCCCTTCTGCTT--------------------------------------------------------TGGTAGAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962128 46 - 2196201 ATGCATCTCATCCTACTGTCTGTATATCCCCTCTGTTT--------------------------------------------------------TGGTAGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3358338 46 - 5030052 ATACATCTCACCCTACTGTCTGTATATCCCTTCTGCTT--------------------------------------------------------TGGTAGAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202628 35 - 11315646 ATGCATCTCATCCTACTG----TATTTCCCTTCTACTT--------------------------------------------------------C------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543334 46 - 129401213 ATGCTCTTTGTCCTACTTTTATTATTAACTTTTTACTC--------------------------------------------------------TGGTAAGG i mm10.chr8 C 0 I 384 s canFam3.chr16 16906608 101 - 59632846 ATGTATCTCCTC-TGTAGTTTTTATTCCCTTTTTCTTCATAGGAAGTGGTCTTTGTTAAAAGAGAGTGAAGGGGgggacacctgggtggctcagtggttgag i canFam3.chr16 C 0 I 187 s dasNov3.JH570353 1411963 46 - 2520184 ATATGTCCTTATCTACCATATTCTTTCCCATCTAACTT--------------------------------------------------------TTATAGGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=-3871.000000 s hg38.chr4_KI270789v1_alt 70129 1 + 205944 -T s panTro5.chr4 192861784 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745503 1 + 195804263 -T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782088 1 + 4876863 -T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667742 1 + 115148730 -T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952373 1 + 190429646 -C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899823 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277804 1 - 25927173 -C i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276229 1 + 135778131 -C i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 835936 1 + 2368649 -C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586899 1 - 190850796 -T i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962174 1 - 2196201 -C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3358384 1 - 5030052 -T i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1412009 1 - 2520184 A- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16906709 187 - 59632846 I e mm10.chr8 86543380 384 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=25635.000000 s hg38.chr4_KI270789v1_alt 70130 3 + 205944 GGG- s panTro5.chr4 192861785 3 + 194502333 GGG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745504 3 + 195804263 GGG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782089 3 + 4876863 GGG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667743 3 + 115148730 GGG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952374 3 + 190429646 GGG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899824 3 + 189454096 GGG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277805 3 - 25927173 GGG- i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276230 3 + 135778131 GGG- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 835937 3 + 2368649 GGG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586900 3 - 190850796 GGG- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962175 3 - 2196201 GGG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3358385 3 - 5030052 GGG- i aotNan1.NW_018492112v1 C 0 I 11 s mm10.chr8 86543764 3 - 129401213 GGG- i mm10.chr8 I 384 C 0 s canFam3.chr16 16906896 3 - 59632846 gag- i canFam3.chr16 I 187 C 0 s dasNov3.JH570353 1412010 3 - 2520184 -GGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e saiBol1.JH378165 13070152 1574 - 14256875 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=5658.000000 s hg38.chr4_KI270789v1_alt 70133 1 + 205944 G s panTro5.chr4 192861788 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745507 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782092 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667746 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952377 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899827 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277808 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276233 1 + 135778131 G i chlSab2.chr7 C 0 I 45 s colAng1.NW_012116221v1 835940 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189586903 1 - 190850796 C i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962178 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86543767 1 - 129401213 G i mm10.chr8 C 0 I 5 s canFam3.chr16 16906899 1 - 59632846 a i canFam3.chr16 C 0 I 5 s dasNov3.JH570353 1412013 1 - 2520184 G i dasNov3.JH570353 C 0 I 7 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e aotNan1.NW_018492112v1 3358388 11 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=6006.000000 s hg38.chr4_KI270789v1_alt 70134 1 + 205944 T s panTro5.chr4 192861789 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745508 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782093 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667747 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952378 1 + 190429646 T i rheMac8.chr5 C 0 I 4 s macFas5.chr5 187899828 1 + 189454096 T i macFas5.chr5 C 0 I 4 s macNem1.NW_012013133v1 24277809 1 - 25927173 T i macNem1.NW_012013133v1 C 0 I 4 s colAng1.NW_012116221v1 835941 1 + 2368649 T i colAng1.NW_012116221v1 C 0 I 53 s calJac3.chr3 189586904 1 - 190850796 T i calJac3.chr3 C 0 I 18 s cebCap1.NW_016107886v1 962179 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 I 13 s dasNov3.JH570353 1412021 1 - 2520184 T i dasNov3.JH570353 I 7 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16906900 5 - 59632846 I e mm10.chr8 86543768 5 - 129401213 I e aotNan1.NW_018492112v1 3358388 11 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e chlSab2.chr7 134276234 45 + 135778131 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=-39453.000000 s hg38.chr4_KI270789v1_alt 70135 8 + 205944 gagag-----aga---- s panTro5.chr4 192861790 8 + 194502333 gagag-----aga---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745509 8 + 195804263 gagag-----aga---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782094 13 + 4876863 CTTGGTTACAaga---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667748 8 + 115148730 CTTCT-----GGC---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952383 4 + 190429646 GTTA------------- i rheMac8.chr5 I 4 I 35 s macFas5.chr5 187899833 4 + 189454096 GTTA------------- i macFas5.chr5 I 4 I 9 s macNem1.NW_012013133v1 24277814 4 - 25927173 GTTA------------- i macNem1.NW_012013133v1 I 4 I 34 s calJac3.chr3 189586923 4 - 190850796 gaga------------- i calJac3.chr3 I 18 C 0 s cebCap1.NW_016107886v1 962193 4 - 2196201 gaga------------- i cebCap1.NW_016107886v1 I 13 C 0 s mm10.chr8 86543773 4 - 129401213 gaga------------- i mm10.chr8 I 5 C 0 s canFam3.chr16 16906905 4 - 59632846 aaga------------- i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1412022 8 - 2520184 ---------GAGATTGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e aotNan1.NW_018492112v1 3358388 11 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e chlSab2.chr7 134276234 45 + 135778131 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=1074.000000 s hg38.chr4_KI270789v1_alt 70143 3 + 205944 -gag s panTro5.chr4 192861798 3 + 194502333 -gag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745517 3 + 195804263 -gag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782107 3 + 4876863 -gag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667756 3 + 115148730 -GGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187899846 3 + 189454096 -GGG i macFas5.chr5 I 9 C 0 s calJac3.chr3 189586927 3 - 190850796 -gag i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962197 3 - 2196201 -cag i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86543777 3 - 129401213 -gac i mm10.chr8 C 0 C 0 s canFam3.chr16 16906909 3 - 59632846 -gaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1412030 3 - 2520184 TTA- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e aotNan1.NW_018492112v1 3358388 11 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e chlSab2.chr7 134276234 45 + 135778131 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e macNem1.NW_012013133v1 24277818 34 - 25927173 I e rheMac8.chr5 188952387 35 + 190429646 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=-2393.000000 s hg38.chr4_KI270789v1_alt 70146 24 + 205944 agagaga------------------------------------------------------------------------------gagagagagagagggag s panTro5.chr4 192861801 68 + 194502333 agagagagggagagagagagagagagggagggagggagagagagagggagg----------------------------------gagagagagagagagag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745520 96 + 195804263 agagaga------gaggaggagagagagaggaggagggaggaggagagaggaggaggagagagagagagaggaggaggagagagagagagagagagagagag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782110 7 + 4876863 agagaca----------------------------------------------------------------------------------------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667759 7 + 115148730 GGGAAGA----------------------------------------------------------------------------------------------- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187899849 7 + 189454096 AGAGAGA----------------------------------------------------------------------------------------------- i macFas5.chr5 C 0 C 0 s calJac3.chr3 189586930 24 - 190850796 agagaga------------------------------------------------------------------------------gagagagagagagagag i calJac3.chr3 C 0 I 2 s cebCap1.NW_016107886v1 962200 24 - 2196201 agacaga------------------------------------------------------------------------------gagagagagagagagag i cebCap1.NW_016107886v1 C 0 I 21 s aotNan1.NW_018492112v1 3358399 24 - 5030052 agagaga------------------------------------------------------------------------------cagagagagacagagag i aotNan1.NW_018492112v1 I 11 C 0 s mm10.chr8 86543780 24 - 129401213 agagaga------------------------------------------------------------------------------gacagagacagagagag i mm10.chr8 C 0 I 2 s canFam3.chr16 16906912 24 - 59632846 agagaaa------------------------------------------------------------------------------gagaaagagaaagagaa i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1412033 17 - 2520184 AGGGAGC------------------------------------------------------------------------------CAGGCAAAGA------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e chlSab2.chr7 134276234 45 + 135778131 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e macNem1.NW_012013133v1 24277818 34 - 25927173 I e rheMac8.chr5 188952387 35 + 190429646 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=19316.000000 s hg38.chr4_KI270789v1_alt 70170 30 + 205944 ggagggagg---------------------gagggagagggagaga-gagaC s panTro5.chr4 192861869 30 + 194502333 ggagggaga---------------------gagagagagagagaga-gagaC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745616 51 + 195804263 agagagagagNNNNNNNNNNNNNNNNNNNNgagagagagagagaga-gagaC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782117 21 + 4876863 ------------------------------gagagagagagagaaa-gCGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667766 14 + 115148730 ------------------------------GACAGAGGGAGAGA-------- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187899856 16 + 189454096 ------------------------------CAGAGCGCGTGAGCAA------ i macFas5.chr5 C 0 C 0 s calJac3.chr3 189586956 28 - 190850796 agagagaga---------------------gaaagagagagagaga-gag-- i calJac3.chr3 I 2 C 0 s aotNan1.NW_018492112v1 3358423 24 - 5030052 ----agaga---------------------gagagagagaaagaga-gag-- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86543806 29 - 129401213 agagaggag---------------------aagagaagagaagagaagag-- i mm10.chr8 I 2 C 0 s canFam3.chr16 16906938 28 - 59632846 agaaagaga---------------------aagagaaagagaaaga-gag-- i canFam3.chr16 I 2 C 0 e cebCap1.NW_016107886v1 962224 21 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412050 0 - 2520184 C e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e chlSab2.chr7 134276234 45 + 135778131 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e macNem1.NW_012013133v1 24277818 34 - 25927173 I e rheMac8.chr5 188952387 35 + 190429646 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=4095.000000 s hg38.chr4_KI270789v1_alt 70200 1 + 205944 A s panTro5.chr4 192861899 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745667 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782138 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s macNem1.NW_012013133v1 24277852 1 - 25927173 A i macNem1.NW_012013133v1 I 34 C 0 s chlSab2.chr7 134276279 1 + 135778131 A i chlSab2.chr7 I 45 C 0 s calJac3.chr3 189586984 1 - 190850796 a i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3358447 1 - 5030052 a i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86543835 1 - 129401213 a i mm10.chr8 C 0 C 0 s canFam3.chr16 16906966 1 - 59632846 a i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 962224 21 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412050 0 - 2520184 C e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e macFas5.chr5 187899872 0 + 189454096 C e rheMac8.chr5 188952387 35 + 190429646 I e nomLeu3.chr7b 112667780 0 + 115148730 C e otoGar3.GL873580 11202663 0 - 11315646 C a score=9227.000000 s hg38.chr4_KI270789v1_alt 70201 6 + 205944 AGGCGG s panTro5.chr4 192861900 6 + 194502333 AGGCGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745668 6 + 195804263 AGGCGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782139 6 + 4876863 AGGCGT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188952422 6 + 190429646 ATGCAT i rheMac8.chr5 I 35 C 0 s macFas5.chr5 187899872 6 + 189454096 ATGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277853 6 - 25927173 ATGCAT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276280 6 + 135778131 ATGCAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189586985 6 - 190850796 gCGCAA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3358448 6 - 5030052 ATGCAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86543836 6 - 129401213 agagaa i mm10.chr8 C 0 C 0 s canFam3.chr16 16906967 6 - 59632846 AGGGGT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 962224 21 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412050 0 - 2520184 C e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 835942 53 + 2368649 I e manLeu1.NW_012102221v1 2714059 57 - 2847728 I e cerAty1.NW_012001672v1 3316974 61 + 4669795 I e nomLeu3.chr7b 112667780 0 + 115148730 C e otoGar3.GL873580 11202663 0 - 11315646 C a score=30251.000000 s hg38.chr4_KI270789v1_alt 70207 4 + 205944 AAGC s panTro5.chr4 192861906 4 + 194502333 AAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745674 4 + 195804263 AAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782145 4 + 4876863 AAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667780 4 + 115148730 CAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952428 4 + 190429646 AAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899878 4 + 189454096 AAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277859 4 - 25927173 AAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3317035 4 + 4669795 AAGC i cerAty1.NW_012001672v1 I 61 C 0 s chlSab2.chr7 134276286 4 + 135778131 AAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714116 4 - 2847728 AAGC i manLeu1.NW_012102221v1 I 57 C 0 s colAng1.NW_012116221v1 835995 4 + 2368649 AAGC i colAng1.NW_012116221v1 I 53 C 0 s calJac3.chr3 189586991 4 - 190850796 AAGC i calJac3.chr3 C 0 I 14 s aotNan1.NW_018492112v1 3358454 4 - 5030052 AGGC i aotNan1.NW_018492112v1 C 0 I 6 s mm10.chr8 86543842 4 - 129401213 gaga i mm10.chr8 C 0 C 0 s canFam3.chr16 16906973 4 - 59632846 CATC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 962224 21 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412050 0 - 2520184 C e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11202663 0 - 11315646 C a score=1400487.000000 s hg38.chr4_KI270789v1_alt 70211 155 + 205944 AGAGCCTTTGCGGGTAGAGCAGATAAAGATTCCCAGACAAATTTCATGGGT-G--AAGTGGCCAATTTACTTCTTTTATAGCTGAATGTCA---------TTTT-TTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CATATTAATAAT--------ATTCAG-AGTCTCCTCT s panTro5.chr4 192861910 158 + 194502333 AGAGGCTTTGCGGGTAGAGCAGATAAAGATTCCCAGACAAATTTCATGGGT-GAAAAGTGGCCAATTTACTTCTTTTATAGCTGAATGTCA--------TTTTT-TTTTGTGGATT--TTTCCACCAAGTAGTGAAAACTCA----CATATTAATAAT--------ATTCAG-AGTCTCCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745678 158 + 195804263 AGAGGCTTTGCGGGTAGAGCAGATAAAGATTCCCAGACAAATTTCATGGGT-GAAAAGTGGCCAATTTACTTCTTTTATAGCTGAATGTCA--------TTTTT-TTTTGTGGATT--TTTCCACCAAGTAGTGAAAACTCA----CATATTAATAAT--------ATTCAG-AGTCTCCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782149 159 + 4876863 AGAGGCTTTGGGGGTAGAGCAGATAAAAATTCCCAGACAAATTTCATGGGT-GAAAAGTGGCCAATATATTTCTTTTATAGCTGAATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CATATTAATAAT--------ATTCAG-AGTCTCCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667784 159 + 115148730 AGAGGCTTTGCGGGTAGAGCAGATAAAAATTCCCAGACAAATTTCATGGGT-GAAAAATGGCCAATTTATTTCTTTTATAGCTGAATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CATATTAATAAT--------ATTCAG-AGTCTCCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952432 150 + 190429646 AGAGGCTTTGTGGGTAGAGCAGATAAAAATTCCCAGACAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTATATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTC---AGTCTCCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187899882 150 + 189454096 AGAGGCTTTGTGGGTAGAGCAGATAAAAATTCCCAGACAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTATATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTC---AGTCTCCTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24277863 150 - 25927173 AGAGGCTTTGTGGGTAGAGCAGATAAAGATTCCCAGACAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTATATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTC---AGTCTCCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3317039 148 + 4669795 AGAGGCTTTGTGGGTAGAGCAGATAAAACTTCC----CAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTACATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTCAG-AGTCTCCTCT i cerAty1.NW_012001672v1 C 0 I 491 s chlSab2.chr7 134276290 150 + 135778131 AGCGGCTTTGTGGGTAGAGCAGATAAAATTTCCCAGACAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTACATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ACTC---AGTCTCCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714120 148 - 2847728 AGAGGCTTTGTGGGTAGAGCAGATAAAACTTCC----CAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTACATAGCTGGATGTCA--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTCAG-AGTCTCCTCT i manLeu1.NW_012102221v1 C 0 I 505 s colAng1.NW_012116221v1 835999 152 + 2368649 AGAGGCTTTGTGGGTAGAGCCGATAAAAATTCCCAGACAAATTTCATGAGT-GAAAGATGGCCAATTTATTTCTTACATAGCTGGATGTCG--------TTTTTATTTTGTGGATT--TTTCCATCAAGTAGTGAAAACTCA----CA-------AAT--------ATTCAG-AGTCTCCTCT i colAng1.NW_012116221v1 C 0 I 499 s calJac3.chr3 189587009 157 - 190850796 AGAGGCTTTGTGGGCAGAGCAGATAAAAATCCCCAGACCAATTTCATGGGT-GAAAAGTGGCCATTTTATTTCTTTTATTGCTGAATGTCA--------CTTTTATTTTCTGGATT--TTTCCATCAAGTAGTGAAAACTCAG---CATATT---AAT--------ATTCAA-ATTCTCCTCT i calJac3.chr3 I 14 C 0 s cebCap1.NW_016107886v1 962245 156 - 2196201 AGAGGCTTTGTGGGCAGAGCAGATAAAAATTCCCAGACCAGTTTCATGGGT-GAAAAATGG-CATTTTATTTCTTCTGTTGCTGAATGTCA--------TTTTTATTTTCTGGATT--TTTCCATCAAGTAGTGAAAACTCAG---CATATT---AAT--------ATTCAA-AGTCTCCTCT i cebCap1.NW_016107886v1 I 21 C 0 s aotNan1.NW_018492112v1 3358464 157 - 5030052 AGAGGCTTTGTGGGCAGAGCAGATAAAAATTCCCAGACCAATTTCATGGGT-GAAAAATGGCCATTTTATTTCTTCTATTGCTGAATGTCA--------TTTTTATTTTCTGGATT--TTTCCATCAAGTAGTGAAAACTCAG---CATATT---AAT--------ATTCAA-AGTCTCCTCT i aotNan1.NW_018492112v1 I 6 C 0 s otoGar3.GL873580 11202663 157 - 11315646 --AGACCTTAGTAGTATAACAGGTAAAAACCTGCAGACACATTTCATGGCT-GAAAAATTACTGGTTTGTTTCTTCTGTAGCTGAGTGTCA--------TTTCTGCCTTGTGCATT-CTTTTCATCAAGGAGTGGGAGCTCT-------------AGTTGCCCTGGATTCAA-ACTCTCCTCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543846 127 - 129401213 ----------agagaagagaagagaaga------------------------gaagagaagaaagaTTAGTTGT----CAGTTGAATGACACTGACAGTTTTACATTTTGTGTATT-ATTCCCATCAGATTTTGGAAACTCAG---CACCAT---GTA--------ATTC---AGTTTCTTTT i mm10.chr8 C 0 I 1 s canFam3.chr16 16906977 148 - 59632846 CAAGGCTTTGT-AGTATAGCATATATAATTTTCAGGACAAATGTCATAGGT-GAAAAAGTATCA----ATTTCTTCTATAGCTGAATGTAA--------T-----TTTTGAGAATTGTATTTCATTTAGTAGTAGAAACTTG----TACTC----ATT--------AATTAATAGTTTCATCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1412050 152 - 2520184 ------TTTGTTAGTATAACAGGTATAA-TTCCTGACAAAACTCCACATGTGGAAAAAATGCCACTTTATTTCTTTTGACGCTGAATGCCG--------TTTTTATTTTGAGAGTC-CACTTCTTTTGGTAGCTGAAATTTAGTACCA-------AGT-------AATTCAG-AGTTTGTCCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=287832.000000 s hg38.chr4_KI270789v1_alt 70366 44 + 205944 GGCCATTTAAGCA--CCCTCTTTGTCCAGAGTCAAGTC-AGATTCTT s panTro5.chr4 192862068 46 + 194502333 GGCCATTTAGGCACCCCCTCTTTGTCCAGAGTCAAGTC-AGATTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745836 44 + 195804263 GGCCATTTAGGCA--CCCTCTTTGTCCAGAGTCAAGTC-AGATTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782308 44 + 4876863 GGCCATTTAAGTA--CCCTCTTTGTCCAGAGTCAAGTC-AGATTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667943 44 + 115148730 GGCCATTTTAGTA--CTCTCTTTGTCCAGAGTCAGATC-AGATTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952582 43 + 190429646 GGCCATTTAAGCA--CCCTC-TTGGCCAGAGTCAAGTC-AGATTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900032 43 + 189454096 GGCCATTTAAGCA--CCCTC-TTGGCCAGAGTCAAGTC-AGATTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278013 43 - 25927173 GGCCATTTAAGCA--CCCTC-TTGGCCAGAGTCAAGTC-AAATTCTT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276440 44 + 135778131 GGCCATTTAAGCA--CCCTCTTTGTCCAGAGTCAAGTC-AGATTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587166 44 - 190850796 GGCAATTTAAACA--CCCTCTTGGTCCGGAGTCAAGTC-AGACTCTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962401 44 - 2196201 GGCAATTTAAACA--CCCTCTTGGTCCAGTGTCAAGTC-AGACTCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3358621 44 - 5030052 GGCAATTTAAACA--CTCTCTTGGTCCAGAGTCAAGTC-AGACTCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202820 45 - 11315646 GGCAAGTTTGGTG--TCCAGTTTGTCCAGCATCAGTTCTACAGTTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86543974 41 - 129401213 ---CATTTAGACA--TTGTCTTTGTCCAAGATCAAATC-TGAGTCTT i mm10.chr8 I 1 I 10809 s canFam3.chr16 16907125 44 - 59632846 GACACCTTAGGCA--CCCTCTTTCTCCAGGGTCAAATT-AAATTCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1412202 45 - 2520184 AACAGTTTAAGGT--GGCTCTCTCTCCACAGTCAAATCTAAATTCAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=739660.000000 s hg38.chr4_KI270789v1_alt 70410 158 + 205944 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTG-GGGGGAGGTTTCTCACCCTTGGCGATCCTCTCCTCCGCACAGGGGCGTCTGTGGGGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCTGCCAGTTCCCAGAGGAACCCTCTCTTCTGGCCACACGCCCGC s panTro5.chr4 192862114 158 + 194502333 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTT-GGGGGAGGTTTCTCGCCCTTGGCGATCGTCTTCTCCGCACAGGGGCGTCTGTGGGGGTG---------------------TCCGCCATTTTGTTTGG---TCTCCGCTGCCAGTTCCCAGAGGAACCCTCTCTTCTGGCCACACGCCCGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192745880 158 + 195804263 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTT-GGGGGAGGTTTCTCGCCCTTGGCGATCGTCTTCTCCGCACAGGGGCGTCTGTGGGGGTG---------------------TCCGCCATTTTGTTTGG---TCTCCGCTGCCAGTTCCCAGAGGAACCCTCTCTTCTGGCCACACGCCCGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782352 158 + 4876863 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTTGGGGGGAGGTTTCTCACCCTTGGCGATCGTCTCCTCCGCGCAGGGGCGTCTGTGGGGGTG---------------------TCCGCCATTTTGTTTGG---CCTCAGCTGCCAGTT-CCAGAGGAACCCTCTCTTCTGGCCACACGCCCGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112667987 157 + 115148730 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTGGGGAGGAGGTTTCTCGCCCTTGGCGATCGTCTCCTCCGCACAGGGGCGTCTGTGGAGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCCGCCAGTTCCC--AGGAACCCTCTCTTCTGGCCACACGCCCGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952625 156 + 190429646 GGCGGCCCGCCTGGCGCCACCTGTGTGAGGGGAGGAGGAGGTTTCTCGCCC--GGC-CTCGTCTGCTCCGCACAGGGGCGTCTGTGGAGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCTGCCGGTTGCCAGAGGAACCCTCTCTGCTGGCCGCAGGCCCGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900075 156 + 189454096 GGCGGCCCGCCTGGCGCCACCTGTGTGAGGGGAGGAGGAGGTTTCTCGCCC--GGC-CTCGTCTGCTCCGCACAGGGGCGTCTGTGGAGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCTGCCGGTTGCCAGAGGAACCCTCTCTGCTGGCCGCAGGCCCGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278056 156 - 25927173 GGCGGCCCGCCTGGCGCCACCTGTGTGAGGGGAGGAGGAGGTTTCTCGCCC--GGC-ATCGTCTGCTCCGCACAGGGGCGTCTGTGGAGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCCGCCAGTTGCCAGAGGAACCCTCTCTGCTGGCCGCAGGCCCGC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276484 155 + 135778131 GGCGGCCCTCCTGGCGCCACCTGTGTGAGGGGAGGAGGAGGTTTCTCGCCC--GGC-ATCGTCTGCTCCGCACACGGGCG-CTGTGGAGGTG---------------------TCCGCCATTTTGTTTGG---TCTCAGCTGCCGGTTGCCAGAGGAATCCTCTCTGCTGGCCGCAGGCCCAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587210 154 - 190850796 GGTGGCCCTCCTGGCACCACGTGTGTGAGGCG---GAGAGGGTTCTTGGCCTTGGTGAGAGTCACCTCTCTACAGGGGCGTC--TGGAGGTG---------------------TCTGTCATTTTGTTTGG---TTTCAGCTGTCAGTTCCCAGAGGAGCCCTGTCTTTCAGCCACCTGCCCGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962445 154 - 2196201 GGCGGCCCTCCTGGCGCCACGTGTGTGAGGTG---GAGAGGTTTCTTGCCCTTGGCGAGAGTCACCTCTGTGCGGGGGCGTC--TGGACGTG---------------------TCTGTCATTTTGTTTGG---CCTCAGCTGCCAGTTCCCAGAGGAGCCCTGTCTTTCGGCCACCTGCCCGC i cebCap1.NW_016107886v1 C 0 I 207 s aotNan1.NW_018492112v1 3358665 154 - 5030052 GGCGGCCCTCCTGGCGCCATGTGTGTGAGGCG---GAGAGGTTTCTTTCCCTTGGCGAGAGTCACCTCTGCACAGGGGCGTC--TGGAGGTG---------------------TCTGTCATTTTGTTTGG---TCTCAGCTGCCAGTTCCCAGAGGAGCCCTGTCTTTCGGCCACCTGCCCGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11202865 167 - 11315646 GGAGG-CCTCGTCAGGCCAGGTGTGTGAGGTG---GACTGACTCCTCGTCCCCGGTGGTAAAGCCGCCTGCTCAGGGGCATCTGTGGAGATGTGACACTGAGCATTAGTTCACTGCACTATCTCACCGGGGCTCCTCAGGTCCCGGTTCCC-GGGGAAACTTCTCCTCCTCC----------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907169 145 - 59632846 GGAAGCATTCTTTATGCCAAATCTATGAGGTG---GAGGGACCTCTTGTCTTTGGTCATGGTCATCTCTGAACATTATTATCTGCAGAGATA---------------------TACATATTTTCATTAGGATTCCCCAGCTACGAATTTTCCACTGAATCTTTTCTTCT-------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1412247 101 - 2520184 GGATGTACTCCTTACCCCAGGTGTAGG--------------------------------------------GCAACAGTGGCTGTAGATACA-------------------------------TGTTTGGCTGCCCCAGCTGTCGATTTC---ATGAACCCTC----CTCACCACAGCTCCCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=466547.000000 s hg38.chr4_KI270789v1_alt 70568 93 + 205944 TTGATGGTCACAGGCCTCCGTCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACGTGACGACTTCCCTGGCCCTCTAGGGTTCTCAGG s panTro5.chr4 192862272 93 + 194502333 TTGATGGTCACAGGCCTCCATCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACGTGACGACTTCCCTGGCCCTCTAGGGTTCTCAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746038 93 + 195804263 TTGATGGTCACAGGCCTCCATCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACGTGACGACTTCCCTGGCCCTCTAGGGTTCTCAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782510 93 + 4876863 TTCGTGGTCACAGGCCTCCGTCAGCGGCTTCTCCATCCCGCTCTGGCAAGCTGAAGTACGTGACGACTTCCCTGGCCCTCTAGGGTTCTCAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668144 93 + 115148730 TTCATGGTCACAGGCCTCCGTCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACGTGACGACTTCCCTGGCCCTCTAGGGTTCTCAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952781 93 + 190429646 TTCATGGTCGCACGCCTCCGTCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACTCGACGCCGTCCCTGGCCCTCTAGGGTTCTCGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900231 93 + 189454096 TTCATGGTCGCACGCCTCCGTCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACTCGACGACGTCCCTGGCCCTCTAGGGTTCTCGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278212 93 - 25927173 TTCATGGTCGCACGCCTCCGTCAGCGGCTTCTCCATCCCTCTCTGGCAAGCTGAAGTACTCGACGACGTCCCTGGCCCTCTAGGGTTCTCGGG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276639 93 + 135778131 TTCATGGTCACACGCCTCCGCCAGCGGCTTCTCCATCCCTCCCTGGCAAGCTGAAGTACTCGCCGGCTTCCCTGGCCCTCTAGGGTTCTCGGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587364 87 - 190850796 TTCATGTTCACGTCTCT-GGCCAGCAGCCTCTCCGCCCCTCTCT-----GCTGAAGTACTTCACGACTTCCCCAGCCCTCCAGGGCTCCAAGG i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3358819 91 - 5030052 TTCATGTTCACATCTCT-GGCCAGCAGCCTCTCCTCCCCTCTCT-GCAAGCTCAAGTACTTGACGACTCCCCCGGCCCTCCATGGTTCCAAGG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11203032 89 - 11315646 TTCATGGTCA---GCTTTCCTCAGTTGCTTCTTGATCCCGCTTTAGCAAACTACAGTACGTGGCTTCTTCCCTGACCCTCC-GGGTTCTGGGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907314 90 - 59632846 ---CTGTCCATATCTCTCCTTCAGCTGCTTCTTCATCCCTCTTTGGTAAACAAAAGTATTTGGCTTTTTACCCAGCCCTCTAGAGGCCTTGGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1412348 88 - 2520184 -TCGACATCA-AGGTCTCC-TCAGCTGCCTCTCTAACCCTCT-TGGCAAA-AGAAGCATTTGTCTCTTTTCTTGACCCACTTTGAATATTAGG i dasNov3.JH570353 C 0 I 679 e cebCap1.NW_016107886v1 962599 207 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=459369.000000 s hg38.chr4_KI270789v1_alt 70661 124 + 205944 CCGTCAGGTACGGGTCTCTGTCAATCTGGCACCTGACAGCTGAGACAAACGAAAAAGACGCTCCGCTCG-----------------------CTGATTCCTGGGCCGCGCGGGGTCACGGGGCGCTGCGGC-TTTCCTGGAATCTCCT s panTro5.chr4 192862365 124 + 194502333 CCGTCAGGTGTGGGTCTCTGTGAATCTGGCACCTGACAGCTGAGACAAACGAAAAAGACGCTCCGCTCG-----------------------CTGATTCCTGGGCCGCGCGGGGTCACGGGGCGCTGCCGC-TTTCCTGGAATCTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746131 124 + 195804263 CCGTCAGGTGTGGGTCTCTGTGAATCTGGCACCTGACAGCTGAGACAAACGAAAAAGACGCTCCGCTCG-----------------------CTGATTCCTGGGCCGCGCGGGGTCACGGGGCGCTGCCGC-TTTCCTGGAATCTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782603 124 + 4876863 CCGTCAGGTACGGGTCTCTGTGAATCTGGCACCTGACAGCTGAGACAAACGAAAAAGACGCTCCGCTCG-----------------------CTGATTCCTGGGCCGCGCGGGGTCACGGGGCGCTGCCGC-TTTCCTGGAATCTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668237 124 + 115148730 CCATCAGGTACGGGTCTCTGTGAACCTGGCACCTGACAGCTGAGACAAACGAACCAGGCGCTCCGCTCG-----------------------CTGATTCCTGGGCCGCGCGGGGTCACAGGGCGCTGCAGC-TTTCCTGGAATCTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952874 124 + 190429646 CTACCAGGTACGGGGCTGTGTGAACCTGGCACCTGACGGCTGAGACAGACAAGGCGGACGTTCTGCTCG-----------------------CTGATGCCGGGGCCGCGCGGGGTCACAGGGCGCTGCCGC-TGTCCTGGAACCTACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900324 124 + 189454096 CTACCAGGTACGGGGCTGTGTGAACCTGGCACCTGACGGCTGAGACAGACAAGGCGGACGTTCTGCTCG-----------------------CTGATCCCGGGGCCGCGCGGGGTCACAGGGCGCTGCCGC-TGTCCTGGAACCTACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278305 124 - 25927173 CTACCAGGTACGGGGCTGTGTGAACCTGGCACCTGACGGCTGAGACAGACAAGGCGGACGTTCTGCTCG-----------------------CTGATCCCGGGGCCGCGCGGGGTCACAGGGCGCTGCCGC-TGTCCTGGAACCTACT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276732 124 + 135778131 CTACCAGGTACGGGGCTGTGTGAACCTGGCACCTGACGGCTGAGACAGACAAGGCGGACGTTCTGCTCG-----------------------CTGGTCCCAGGGCCGCGCGGGGTCACAGGGCGCTGCCGC-TGTCCTGGAATCTACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587451 113 - 190850796 ACACCAGGCAC------CTGTGAACCTCTCA-CTGACAGCTGAGAC---AAGAACAGACGCTCTGCTCG-----------------------CTGATTCCTGGGCCACATGCGGTCACAGGGTGCGGCTGCTTTTCCTGGGCTCCA-- i calJac3.chr3 C 0 I 1 s aotNan1.NW_018492112v1 3358910 111 - 5030052 CCATCAGGCAC------CTGTGAACCTTGCA-CTGACAGCTGAGACA-AAAAAACAGACACTCTGCTCG-----------------------CTGATTTCTGGGCCACATGTGGTCACAGGGTGC----GCTTTTCCTGCGCTCCA-- i aotNan1.NW_018492112v1 C 0 I 1 s otoGar3.GL873580 11203121 138 - 11315646 CC-TCAGCTGC-CATCTCTGTGAACCTGGGACCTGAGAGCTGAGACACACCACACACGCATTCTCCTCGGAGCCACCCCCTCCTCACCGTCCCCGTGCCCCAGGCCGCAGGGGG-----GGGGGCAA--GT-TTTCCTGTCCCCTCCC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907404 109 - 59632846 TCATCAAGTACAAATCTCCATGAATCTTTGGTGAGAGAACTTTGACACATAATACAAATATTCTG---G-----------------------CTATCT------------GGAGTCCTGGAGGGGCTCTTT-TTCTCTGGACTCTTCT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 962599 207 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412436 679 - 2520184 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=268663.000000 s hg38.chr4_KI270789v1_alt 70785 57 + 205944 CAGGATTCAGGCACACCCTGTGCTCTCAGGTTCACTAAACCCGTCTGGGGTTTCTA-C s panTro5.chr4 192862489 57 + 194502333 CAGGATTCAGGCACACCCTGTGCTCTCAGGTTCACTAAACCCGTCTGGGGGTTCTA-C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746255 57 + 195804263 CAGGATTCAGGCACACCCTGTGCTCTCAGGTTCACTAAACCCGTCTGGGGGTTCTA-C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782727 57 + 4876863 CAGGATTCAGGCACACCCTGTGCTCTCAGATTCACTACACCCGTCTGGGGTTTCTA-C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668361 57 + 115148730 CAGGATTCAGGCACACCCTGTGCTCCCAGATTCACCAAACCCGTCTGGGGTTTCTA-C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188952998 56 + 190429646 CGGGATTCAGGCGCACCCTGTGCTCACAGATCCACCAAACC-GCCTGGGGTTTCTG-C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900448 56 + 189454096 CGGGATTCAGGCGCACCGTGTGCTCACAGATCCACCAAACC-GTCTGGGGTTTCTG-C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278429 56 - 25927173 CGGGATTCAGGCGCACCCTGTGCTCACAGATCCACCAAACC-GTCTGGGGTTTCTG-C i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276856 55 + 135778131 CGGGATTCAGGCGCACCCGGTGCTCACGGATCCACCGAACC--CGTCGGGTTTCTG-C i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587565 57 - 190850796 CAGGATTCGGGCACACCCTGTGTGCCCAGCTTCACCAAACCCATTTGGGGATTCTA-C i calJac3.chr3 I 1 C 0 s cebCap1.NW_016107886v1 962806 57 - 2196201 CAGGATTCGGGCACACCCAGTGCGCTCAGCTTCACCAGACCCATGTGGGGCTTCTA-C i cebCap1.NW_016107886v1 I 207 C 0 s aotNan1.NW_018492112v1 3359022 57 - 5030052 CAGGATTTGGGTACACCCAGTGAGCCCAGCTTCACCAAACCCATGTGGGGCTTCTA-C i aotNan1.NW_018492112v1 I 1 C 0 s otoGar3.GL873580 11203259 56 - 11315646 TGACACGGAGCCACATCCTGCGCTTGCAGATTC-CCTGACCTCTCGGGGCGGCCAG-C i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907513 55 - 59632846 GAAGATTAGGG---ACCCTCTGGTTTCACATTTACCAAATCTACCTAGAGTTTCTAGT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1412436 679 - 2520184 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=103667.000000 s hg38.chr4_KI270789v1_alt 70842 18 + 205944 ACACGACCTGAAGGCATC s panTro5.chr4 192862546 18 + 194502333 ACACGACCTGAAGGCATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746312 18 + 195804263 ACACGACCTGAAGGCATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782784 18 + 4876863 ACACGACCTGAAGGCATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668418 18 + 115148730 ACACGACCTGGAGGCATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953054 18 + 190429646 GCACGACCTGGAGGCACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900504 18 + 189454096 GCACGACCTGGAGGCACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278485 18 - 25927173 GCACGACCTGGAGGCACC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276911 18 + 135778131 GCACGAGCTGGCAGCACC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587622 18 - 190850796 CCATGACCTGGAGGCATC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962863 18 - 2196201 CCACAACCTGGAGGCATC i cebCap1.NW_016107886v1 C 0 I 91 s aotNan1.NW_018492112v1 3359079 18 - 5030052 CCACGACCTGGAGGCATC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11203315 16 - 11315646 TCCTG--CAGGAGGCACG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907568 18 - 59632846 ATACTATTAGGAAGTATC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1413115 18 - 2520184 ACTCTGCCAGGAGGCATC i dasNov3.JH570353 I 679 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=508021.000000 s hg38.chr4_KI270789v1_alt 70860 112 + 205944 -TCCGCCCTTTGGCGGCAGATAGAGGA------------------ATAGAAACGACTGAGGAGAC-ATGAAGCAGGGAGGAAA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAACGTCCAG-GAGACA s panTro5.chr4 192862564 112 + 194502333 -TCCGCCCTTTGGCGGCAGATAGAGGA------------------ATAGAAACGACTGAGGAGAC-ATGAAGCAGGGAGGAAA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAACGTCCAG-GAGACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746330 112 + 195804263 -TCCGCCCTTTGGCGGCAGATAGAGGA------------------ATAGAAACGACTGAGGAGAC-ATGAAGCAGGGAGGAAA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAACGTCCAG-GAGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782802 112 + 4876863 -TCCGCCCTTTGGCGGCAGATAGAGGA------------------ATAGAAACGACTGAGGAGAC-ATGAAGCAGGGAGGAAA-ACCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAACGTCCAG-GAGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668436 112 + 115148730 -TCCGCCCTTTGGCGGCAGATAGAGGA------------------ATAGAAACGACTGAGGAGAC-ATGAAGCAGGGAGGAAA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAACGTCCGG-GAGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953072 112 + 190429646 -TCCGCCCTTTGGCGGCGGATAGAGGA------------------CTAGAAACGACTGAGGAGAC-GTGAAGCAGGGAGGAGA-AGCCGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAATGTCCAG-GGGACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900522 112 + 189454096 -TCCGCCCTTTGGCGGCGGATAGAGGA------------------CTAGAAACGACTGAGGAGAC-GTGAAGCAGGGAGGAGA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAATGTCCAG-GGGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278503 112 - 25927173 -TCCGCCCTTTGGCGGCGGATAGAGGA------------------CTAGAAACGACTGAGGAGAC-GTGAAGCAGGGAGGAGA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAGCGTCCAG-GGGACT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134276929 111 + 135778131 -TCCGCCCTTTGGCGGCGGCTAGAGGA------------------CTAGAAACGACGGAGGAGAC-GTGAAGC-GGGGGGAAA-AGCTGGATGAGAGGAAGCACAGGGAGTGG-AAGGCAGCGTCCGG-GGGACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587640 113 - 190850796 -ACTGCGCTTTCGC-ACAGATGGAGGA------------------GTGGAAATGACCGAGGAGGCGGTGACGCAGGGAGGAGA-AGCTGGATGAGAGCAAGGACGGGGAGTGG-AGGGCGACACCCAGTGCGGCC i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3359097 113 - 5030052 -ACTGCGCTTCCAC-GCAGATGGAGGA------------------GTGGAAACGACCGAGGAGACGGTGACGCAGGGAGGAGA-AGATGGATGAGAGCAGGGACAGGGAGTGG-AAGGCAACACCTAGTGTGACC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11203331 106 - 11315646 -GGGGGCCTTCCCTGCCAAGTGGAGGA------------------GGAGAAACAATTGAGGAGAA-ATGGAAGAAGTTTTAAA-AACTGAAGGCGAGAAACAACA------GG-ATGGCAGGGTCCCT-TGGGCT i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16907587 131 - 59632846 -GGTGCCCTTTCATGGTAAGCAGAGGAGTAGACTTCTGCTTGATTGTAGAAACAATCAAGGGGAAGATGGAGGGAGTAAGAAAGAACTGGGTGAGAGAATG-GCAGGGAGCAG--TGGCAATGTCCCATGGCACA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1413133 101 - 2520184 TGGTATAGTTTGGCAGTAGATAGAGGA------------------GTAGAA---------------AAAAAATGGGGGGGGGG-GACTGGATGAGCGTATGTGAGGGAAGGGGCCACACAAAGACCTGTGGGGCA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 962881 91 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=548095.000000 s hg38.chr4_KI270789v1_alt 70972 103 + 205944 ---CGGCTCCTGATGCCCTTTCGTCTCGGTGGGCTCTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAG s panTro5.chr4 192862676 103 + 194502333 ---CGGCTCCTGATGCCCTTTCGTCTCGGTGGGCTCTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746442 103 + 195804263 ---CGGCTCCTGATGCCCTTTCGTCTCGGTGGGCTCTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3782914 103 + 4876863 ---CGGCTCCTGGTGCCCTTTCGTCTCGGTGGGCTCTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668548 103 + 115148730 ---AGGCTCCTGATGCCCGTTCGTCTCGGTGGGCTCTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTGCGGACTCCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953184 103 + 190429646 ---CGGCTCCTCATGCCGTTTTGTCTCGATGAACTGTTTGT-GGCGAACCGCTGTTTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900634 103 + 189454096 ---CGGCTCCTCATGCCGTTTCGTCTCGATGAACTGTCTGT-GGCGAACCGCTGTCTGCTTGAGAGGAA--------AAGGGAAGTCATATTTGG--TGCCATCCTCTGGACTCCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278615 113 - 25927173 ---CGGCTCCTCATGCCGTTTCGTCTCGATGAACTGTCTCT-GGCGAACCGCTGTCTGCTTGAGAGGAAAAAGGAACAAGGGAAGTCATATTTGGGCTGCCATCCTCTGGACTCCAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134277040 103 + 135778131 ---CGGCCCCTCATACCATTTTGTCTCAATGAACTGTCTGT-GGCGAACCGTTGTCTGCTTGAGAGGAA--------AAGGGAAGTCACATTTGG--TGCCATCCTCTGGACTCCAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587753 100 - 190850796 ---CAGCTCCTGGTGCCT-CCCACCTGGGTGGGCT-TCTGT--GCAAACCATTGTCTGCGGGAGAGCAA--------AAGGGAAGTCACATTTGG--TGCTGTCCTTTGGACTCCAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 962972 100 - 2196201 ---CGGCTCCTGATGCCC-TTCGTCTGGGTGGGCT-TCTGT--GCAAACCACTGTCTGCGTGAGAGCAA--------AAGGGAAGTCACATTTGG--TGCTGTCCTTTGGACTCCAA i cebCap1.NW_016107886v1 I 91 C 0 s aotNan1.NW_018492112v1 3359210 101 - 5030052 ---CAAATCCTGATGCCCTTTCGTCTGAGTGGGCT-TCTGT--GCAAACCATTGTCTGCATGAGAGGAA--------AAGGGAAGTCACATTTGG--TTCTGTCCTTTGGACTCCAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11203440 96 - 11315646 ----AGACTCCGATGCCTGTTTGTCCTTGTGGACTTTCCGG-GGC---CAGGTGGCTTCCTGACAGGGT--------A---GAACTGACGCTCAG--CGCCACCCTCTGGACTCCAG i otoGar3.GL873580 I 3 I 132 s canFam3.chr16 16907718 97 - 59632846 ---TGATTCCCCATGCTCATTCAT---AGTGGACTTCCTATGGGCAAACA---GTCCTCTTGAGGGGAA--------AAGTAGAGTCATGTTTTG--TATTATCTGCTGGACTCAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413234 98 - 2520184 CAAAGAGCCCTCTCGCTCATCCGT---AGTGGGCTCGGTGG--GCAGACG---GTCTTCCTGAGGGGAA--------AAGTCCAGTCATGGTTA---TGCCACCATCTGGTCTCAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I a score=41995.000000 s hg38.chr4_KI270789v1_alt 71075 7 + 205944 ATGTTTT s panTro5.chr4 192862779 7 + 194502333 ATGTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746545 7 + 195804263 ATGTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783017 7 + 4876863 ATGTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668651 7 + 115148730 ATGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953287 7 + 190429646 GTGTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900737 7 + 189454096 GTGTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24278728 7 - 25927173 GTGTTTT i macNem1.NW_012013133v1 C 0 I 769 s chlSab2.chr7 134277143 7 + 135778131 GTGTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587853 7 - 190850796 GCGTTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 963072 7 - 2196201 GCGTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3359311 7 - 5030052 GCGTTTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16907815 7 - 59632846 ACGGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413332 7 - 2520184 GGGCTTT i dasNov3.JH570353 C 0 I 19 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=36622.000000 s hg38.chr4_KI270789v1_alt 71082 8 + 205944 TGTGCCTG s panTro5.chr4 192862786 8 + 194502333 TGTGCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746552 8 + 195804263 TGTGCCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783024 8 + 4876863 TGTGCCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668658 8 + 115148730 TGTGCCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953294 8 + 190429646 CATGCCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900744 8 + 189454096 CATGCCTG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134277150 8 + 135778131 CGTGCCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189587860 8 - 190850796 TGTGCCTG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 963079 8 - 2196201 TGTGCCTG i cebCap1.NW_016107886v1 C 0 I 884 s aotNan1.NW_018492112v1 3359318 8 - 5030052 TGCGCCTG i aotNan1.NW_018492112v1 C 0 I 766 s canFam3.chr16 16907822 8 - 59632846 GGTTTTTG i canFam3.chr16 C 0 I 152 e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=16376.000000 s hg38.chr4_KI270789v1_alt 71090 5 + 205944 GCCAT s panTro5.chr4 192862794 5 + 194502333 GCCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746560 5 + 195804263 GCCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783032 5 + 4876863 GCCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668666 5 + 115148730 GCCGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953302 5 + 190429646 GCCat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900752 5 + 189454096 GCCat i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134277158 5 + 135778131 GCCAT i chlSab2.chr7 C 0 I 721 s calJac3.chr3 189587868 5 - 190850796 GCCAT i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=5096.000000 s hg38.chr4_KI270789v1_alt 71095 2 + 205944 AA s panTro5.chr4 192862799 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746565 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783037 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668671 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953307 2 + 190429646 aa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187900757 2 + 189454096 aa i macFas5.chr5 C 0 C 0 s calJac3.chr3 189587873 2 - 190850796 AA i calJac3.chr3 C 0 I 3664 e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=1911.000000 s hg38.chr4_KI270789v1_alt 71097 1 + 205944 T s panTro5.chr4 192862801 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746567 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783039 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668673 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953309 1 + 190429646 t i rheMac8.chr5 C 0 I 119 s macFas5.chr5 187900759 1 + 189454096 t i macFas5.chr5 C 0 I 11 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=46580.000000 s hg38.chr4_KI270789v1_alt 71098 105 + 205944 tatatatatatgcgcatatatatatatatttgcatatatatatatttgcatatatatatatat-tttgtttg-------------tttgtttgtttttggagacagaatctcactctgt s panTro5.chr4 192862802 65 + 194502333 tatatatatatgagcatatatatatatat----atatat--------------------------------------------------tttgtttttggagacagaatctcactctgc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746568 63 + 195804263 tatatatatatatgagcatatatatat------atatat--------------------------------------------------tttgtttttggagacagaatctcactctgc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783040 65 + 4876863 tatatatatatatgcgcatatatatatat----atatCT--------------------------------------------------TTTGGttttggagacagaatctcactctgc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668674 98 + 115148730 TATATATATATATGCGCatatatatatat----atatat----atatgcgcatatatatatatatatatata-------------tatatatatatTTGgagacagaatctcactctgt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187900771 111 + 189454096 tatatatatgtgtgtgtgtgtgtgtgtgt----gtgtgt----gtgtgtgtatatatatatatatatatatatttttttttttttttttttttttttttgagacggagtcttgctctgt i macFas5.chr5 I 11 I 1 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e rheMac8.chr5 188953310 119 + 190429646 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=102221.000000 s hg38.chr4_KI270789v1_alt 71203 59 + 205944 gcccaggctggagtgaagtggcgcgatctgggctcactgcaagccccgccttccggctt s panTro5.chr4 192862867 59 + 194502333 gcccaggctggagtgaagtggcgccatctcggctcactgcaagccccgccttccggctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746631 59 + 195804263 gcccaggctggagtgaagtggcgccatctcggctcactgcaagccccgccttccggctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783105 59 + 4876863 gcccaggctggagtgaagtggcgcgatctcggctcactgcaagctccgccttccggctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668772 59 + 115148730 gcccaggctggagtgcagcggcgcgatctcggctcactgcaagctccgcctcccggctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953429 59 + 190429646 ccccgggctggagtgcagtggcgcgatctcggctccctgcaagctccgcctcccaggtt i rheMac8.chr5 I 119 C 0 s macFas5.chr5 187900883 59 + 189454096 ccccgggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccaggtt i macFas5.chr5 I 1 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413339 19 - 2520184 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=104078.000000 s hg38.chr4_KI270789v1_alt 71262 57 + 205944 cccgccattctcctgcctcagcctcgc--gagtagctgggacgacaggcg-c---cgccacca s panTro5.chr4 192862926 57 + 194502333 cccgccattctcctgcctcagcctcgc--gagtagctgggactacaggcg-c---cgccacca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746690 57 + 195804263 cccgccattctcctgcctcagcctcgc--gagtagctgggactacaggcg-c---cgccacca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783164 57 + 4876863 cccgccattctcctgactcagcctcgc--cagtagctgggactacaggcg-c---cgccacca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668831 58 + 115148730 cccgccattctcctgcctcagcctccg--gagtagctgggactacaggcgcc---cgccacca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188953488 57 + 190429646 cccgccattctcctgcctcagcctctc--gagtagctgggactgcagggg-c---cgccacca i rheMac8.chr5 C 0 I 553 s macFas5.chr5 187900942 57 + 189454096 cccgccattctcctgcctcagcctctc--gagtagctgggactgcaggcg-c---cgccacca i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1413358 62 - 2520184 CCTGCTACAGTCCCTTCCAAACCTTGCTTGTGTAACTGAGGACACACACG-TATGTGTAAATA i dasNov3.JH570353 I 19 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=1874.000000 s hg38.chr4_KI270789v1_alt 71319 2 + 205944 gg s panTro5.chr4 192862983 2 + 194502333 cg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746747 2 + 195804263 cg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783221 2 + 4876863 cg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668889 2 + 115148730 cg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187900999 2 + 189454096 cg i macFas5.chr5 C 0 C 0 s dasNov3.JH570353 1413420 2 - 2520184 AG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16907830 152 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e rheMac8.chr5 188953545 553 + 190429646 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=4014.000000 s hg38.chr4_KI270789v1_alt 71321 7 + 205944 -cttagct----- s panTro5.chr4 192862985 7 + 194502333 -cttggct----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746749 7 + 195804263 -cttggct----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783223 7 + 4876863 -cttgact----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668891 7 + 115148730 -cctggct----- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187901001 7 + 189454096 -cccggct----- i macFas5.chr5 C 0 I 558 s canFam3.chr16 16907982 7 - 59632846 -TCTTCCT----- i canFam3.chr16 I 152 I 1 s dasNov3.JH570353 1413422 13 - 2520184 CTTAGACTCTTCT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e rheMac8.chr5 188953545 553 + 190429646 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=-1300.000000 s hg38.chr4_KI270789v1_alt 71328 1 + 205944 -G s panTro5.chr4 192862992 1 + 194502333 -G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746756 1 + 195804263 -G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783230 1 + 4876863 -G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668898 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s dasNov3.JH570353 1413435 1 - 2520184 T- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16907989 1 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 836151 499 + 2368649 I e manLeu1.NW_012102221v1 2714268 505 - 2847728 I e chlSab2.chr7 134277163 721 + 135778131 I e cerAty1.NW_012001672v1 3317187 491 + 4669795 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e macFas5.chr5 187901008 558 + 189454096 I e rheMac8.chr5 188953545 553 + 190429646 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=4664.000000 s hg38.chr4_KI270789v1_alt 71329 1 + 205944 T s panTro5.chr4 192862993 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746757 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783231 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668899 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954098 1 + 190429646 T i rheMac8.chr5 I 553 C 0 s cerAty1.NW_012001672v1 3317678 1 + 4669795 T i cerAty1.NW_012001672v1 I 491 C 0 s chlSab2.chr7 134277884 1 + 135778131 T i chlSab2.chr7 I 721 C 0 s manLeu1.NW_012102221v1 2714773 1 - 2847728 T i manLeu1.NW_012102221v1 I 505 C 0 s colAng1.NW_012116221v1 836650 1 + 2368649 T i colAng1.NW_012116221v1 I 499 C 0 s canFam3.chr16 16907990 1 - 59632846 C i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1413436 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e macFas5.chr5 187901008 558 + 189454096 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=7800.000000 s hg38.chr4_KI270789v1_alt 71330 1 + 205944 C s panTro5.chr4 192862994 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746758 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783232 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668900 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954099 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901566 1 + 189454096 C i macFas5.chr5 I 558 C 0 s cerAty1.NW_012001672v1 3317679 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277885 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714774 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836651 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16907991 1 - 59632846 C i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413437 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203536 132 - 11315646 I a score=16562.000000 s hg38.chr4_KI270789v1_alt 71331 2 + 205944 AA s panTro5.chr4 192862995 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746759 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783233 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668901 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954100 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901567 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3317680 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277886 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714775 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836652 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11203668 2 - 11315646 AA i otoGar3.GL873580 I 132 C 0 s canFam3.chr16 16907992 2 - 59632846 AA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413438 2 - 2520184 AA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 963087 884 - 2196201 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3359326 766 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I a score=182118.000000 s hg38.chr4_KI270789v1_alt 71333 22 + 205944 ATTA-GCTATTTTTAAGGTAATC s panTro5.chr4 192862997 22 + 194502333 ATTA-GCTATTTTTAAGGTAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746761 22 + 195804263 ATTA-GCTATTTTTAAGGTAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783235 22 + 4876863 ATTA-GCTATTTTTAAGGTAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668903 22 + 115148730 ATTA-GCTATTTTTAAGGTAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954102 22 + 190429646 ATTA-GCTATTTTTAAAGTAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901569 22 + 189454096 ATTA-GCTATTTTTAAAGTAATT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3317682 22 + 4669795 ATTA-GCTATTTTTAAAGTAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277888 22 + 135778131 ATTA-GCTATTTTTAAAGTAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714777 22 - 2847728 ATTA-GCTATTTTTAAAGTAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836654 22 + 2368649 ATTA-GCTATTTTTAAAGTAATG i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 963971 22 - 2196201 ATTA-GCTGTTTTTAAGGCAATT i cebCap1.NW_016107886v1 I 884 C 0 s aotNan1.NW_018492112v1 3360092 22 - 5030052 ATTA-GCTATTTTTAAGGCAATT i aotNan1.NW_018492112v1 I 766 C 0 s otoGar3.GL873580 11203670 20 - 11315646 ACCA-GACATTTTTAAAGTAG-- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16907994 23 - 59632846 ATTAGGTTATTTTTAAGGTAGCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413440 22 - 2520184 ATTT-GGTATTTGTGAAGTAGTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e proCoq1.NW_012145301v1 3901679 1294 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I a score=22920.000000 s hg38.chr4_KI270789v1_alt 71355 2 + 205944 GA s panTro5.chr4 192863019 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746783 2 + 195804263 GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783257 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668925 2 + 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954124 2 + 190429646 GA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901591 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3317704 2 + 4669795 GA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277910 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714799 2 - 2847728 GA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836676 2 + 2368649 GA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 963993 2 - 2196201 GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3360114 2 - 5030052 GA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3902973 2 + 3993831 GA i proCoq1.NW_012145301v1 I 1294 C 0 s canFam3.chr16 16908017 2 - 59632846 GA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413462 2 - 2520184 GA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24278735 769 - 25927173 I e otoGar3.GL873580 11203690 0 - 11315646 C a score=419996.000000 s hg38.chr4_KI270789v1_alt 71357 48 + 205944 TTCTGAAAGGCAAGTCAGAATGTATAAAGC-TCAAATGAAC--TTCTCTAT s panTro5.chr4 192863021 48 + 194502333 TTCTGAAAGGCAAGTCAGAATGTATAAAGC-TCAGATGAAC--TTCTCTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746785 48 + 195804263 TTATGAAAGGCAAGTCAGAATGTATAAAGC-TCAGATGAAC--GTCTCTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783259 48 + 4876863 TTCTGCAAGGCAAGTCAGAATGTATAAAGC-TCAGATGAAC--TTCTCTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668927 48 + 115148730 TTCTGAAAGGCAAGTCAGAATGTATAAAGC-TCAAATGAAC--ATCTCTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954126 48 + 190429646 TTCTGAAAGGCAAATCAGAATGTATAAAAC-TCAAATGAAC--TTTTCTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901593 48 + 189454096 TTCTGAAAGGCAAATCAGAATGTATAAAAC-TCAAATGAAC--TTTTCTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24279504 50 - 25927173 TTCTGAAAGGCAAATCAGAATGTATAAAAC-TCAAATGAACCTTTTTCTAT i macNem1.NW_012013133v1 I 769 C 0 s cerAty1.NW_012001672v1 3317706 48 + 4669795 TTCTGAAAGGCAAGTCAGAATGTACAAAAC-TCAAATGAAC--TTTTCTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277912 48 + 135778131 TTCTGAAAGGCAAATCAGAATGTATAAAAC-TCAAATGAAC--TTTTCTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714801 48 - 2847728 TTCTGAAAGGCAAGTCAGAATGTATAAAAC-TCAAATGAAC--TTTTCTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836678 48 + 2368649 TTCTGAAAGGCAAGTCAGAATGTATAAAAC-TCAAATGAAC--TTTTCTAT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 963995 48 - 2196201 TTCTGAAAAGCAAGTGTGAATGTGTGAAGC-TCATGTGGAC--TTCCCCGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3360116 48 - 5030052 TTCTGAAAAGCAAGTGTGAATGTGTAAAGC-TCACGTGAAC--TTCTCTAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3902975 48 + 3993831 TTCTGAAAAACAAGTCATAGTTTATAAAGT-TCAAATGAAC--TTCTCTAT i proCoq1.NW_012145301v1 C 0 I 2561 s otoGar3.GL873580 11203690 33 - 11315646 --CTGAA-------------TTTATAAAGT-TAAAATGAAC--TTCTCCCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16908019 36 - 59632846 TTCCAAAAAATAAGTCaaaatttataaaat-ttatat-------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413464 48 - 2520184 TTCTGAAAC-CAAGTGAAAATTTCTAAAAAGTCAAATGTAA--TTCTATAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=152453.000000 s hg38.chr4_KI270789v1_alt 71405 20 + 205944 GTT-ACACACTGTTTCTGTAC-------------- s panTro5.chr4 192863069 20 + 194502333 GTT-ACACACTGTTTCTGTAC-------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746833 20 + 195804263 GTT-ACACACTGTTTCTGTAC-------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783307 20 + 4876863 GTT-ATACACTGTTTCTGTAC-------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668975 20 + 115148730 GTT-ATACACTGTTTCTGTAC-------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954174 20 + 190429646 GTT-ACACACTGTTTCTGTAC-------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901641 20 + 189454096 GTT-ACACACTGTTTCTGTAC-------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24279554 21 - 25927173 GTTAACACACTGTTTCTGTAC-------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3317754 20 + 4669795 GTT-ACACACTGTTTCTATAC-------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277960 20 + 135778131 GTT-ATACACTGTTTCTGTAC-------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714849 20 - 2847728 GTT-ACACACTGTTTCTGTAc-------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836726 20 + 2368649 GTT-ACACACTGTTTCTGTAC-------------- i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 964043 20 - 2196201 GTT-AGATGCTGTTTCTGTGC-------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3360164 20 - 5030052 GTT-AGATGCTGTTTCTGTCC-------------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11203723 20 - 11315646 ATG-GTAGGTTGTACCTGTAC-------------- i otoGar3.GL873580 C 0 I 5920 s canFam3.chr16 16908055 20 - 59632846 att-atGTATTACTTCTATAG-------------- i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1413512 34 - 2520184 ATT-ATATATCATATTTAGATTTCTAATACATATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=623901.000000 s hg38.chr4_KI270789v1_alt 71425 87 + 205944 CAttcagtcttgac-------tccactcttcct---g-ccgccctcagtctagttgcag------------------------tc---------caggtgccctg-----ttttcagttccta-aa-ccacaccatgt s panTro5.chr4 192863089 88 + 194502333 TATTCAGTCTTGAc-------tccactcttcct---gcccgccctcaatctagttccag------------------------tc---------caggtgccctg-----ttctcggttccta-aa-ccacaccatgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746853 88 + 195804263 TATTCAGTCTTGAc-------tccactcttcct---gcccgccctcaatctagttccag------------------------tc---------caggtgccctg-----ttctcggttccta-aa-ccacaccatgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783327 88 + 4876863 TATTCAGTCTTGAc-------tccactcttcct---gcccgccctcaatctagttccaa------------------------tc---------caggtgccccg-----ttttcggttccta-aa-ccacaccatgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112668995 88 + 115148730 TATTGAGTCTTGAC-------Tccactcttcct---gcccaccctcaatctagttccag------------------------tc---------caggtgccctg-----ttttcagttccta-aa-ccacaccatgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954194 92 + 190429646 TATTCGGTCTTGAC---TCCTTCCATTCTTCCT---GCTCACCCTCAGGCTAGTTCCAA------------------------TC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-AA-CCACACCATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901661 92 + 189454096 TATTCAGTCTTGAC---TCTTTCCATTCTTCCT---GCTCACCCTCAGGCTAGTTCCAA------------------------TC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-AA-CCACACCATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24279575 92 - 25927173 TATTCAGTCTTGAC---TCCTTCCATTCTTCCT--GGCTCACCCTCA-GTTAGTTCCAA------------------------TC---------CAGGTGCCCTG------TTTCAGTTCCTA-AACCCACACCATGT i macNem1.NW_012013133v1 C 0 I 4279 s cerAty1.NW_012001672v1 3317774 95 + 4669795 TATTCAGTCTTGAC---TCTTTCCACTCTTCCGTGAGCCCACCCGCAGTCTAGTTCCAA------------------------TC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-AA-CCACACCGTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134277980 92 + 135778131 TATTCAGTCTTGAC---TCCTTCCATTCTTCCT---GCCCACCCTCAGGCTAGTTCCAA------------------------TC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-AA-CTACACCATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714869 92 - 2847728 tattcagtcttgac---tccttccactcttcct---gcccacccgcagtctagttccaa------------------------tc---------caggtgccctg-----ttttcagttccta-aa-ccacaccgtgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836746 92 + 2368649 TATTCAGTCTTGAC---TCCTTCCACTCTTCCT---GCCCACCCTCAGTCTGGTTCCAA------------------------TC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-AA-CCACACCATGT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 964063 91 - 2196201 TTTTCAGCCTTGAC---TCCTTCCCCTGTTCCT---GCCCACCCTCAGTCCAGTTCCAA------------------------AC---------CAGGGGTCCCA-----TCTTCAGTTCCT--GA-CCACACCATGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3360184 92 - 5030052 TTTTCAGTCTTGAC---TCCTTCCACTCTTCCT---GCCCACCCTTAGTCCAGTTCCAA------------------------AC---------CAGGTGCCCTG-----TTTTCAGTTCCTA-GA-CCGCACCGTGT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16908077 91 - 59632846 TCATCACCCTTGAC--------------TTCTT---GTCTACCCTGATTCTAGTTTCAA------------------------ACTCACACACATATATACATAG-----GTTCCAGTTACTCTGA-TTATTTCATGT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1413546 124 - 2520184 CATTCATCCATTCCAATTCCTTCAAGTCTTCCT---GCTTCCCTTTTCCATAGCACTGAACTCACACACATGTGTTCAtaggttc---------cagccaccctgaattgcttccaatcccta-ca-ccacaccatgc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=476654.000000 s hg38.chr4_KI270789v1_alt 71512 77 + 205944 catctctagcatcaagcatttttctctacagcatttttccttcctacctacaacccatactttatatagttaacttc s panTro5.chr4 192863177 77 + 194502333 catctccagcatcaagcatttttctctacagcatttttccttcctacctacaacccatactttatatagttaacttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192746941 77 + 195804263 catctccagcatcaagcatttttctctacagcatttttccttcctacctacaacccatactttatatagttaacttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783415 77 + 4876863 catctctagcatcaagcatttttgtctacagcatttttccttcctgcctacaacccatactttatatagttaacttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669083 77 + 115148730 catctctagcgtcaagcatttttgtctacaacatttttccttcctacccacaactcatactttatatcgttcacttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954286 77 + 190429646 GATCTCAAGCATCAAGCATTTTTGTCTACAACGTTCTTCCTTCCTATCTACAGCCAATGCTTTATATAATTAACTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901753 73 + 189454096 GATCTCAAGCATCAAGCATTTTTGTCTACAACATT----CTTCCTACCTACAGCCAATGCTTTATATAATTAACTTC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3317869 77 + 4669795 GATCTCAAGCATCAAGCATTTATGTCTACAACATTCTTCCTTCCTACCTACAGCCCCTGCTTTATATAATTAACTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278072 77 + 135778131 GATCTCAAGCATCAAGCATTTTTGTCTACAACATTCTTCCTTCCTTCCTACAGCCAGTGCTTTATATAATTAACTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2714961 77 - 2847728 gatctcaagcatcaagcatttatgtctacaacattcttccttcctacctacagcccctgctttatataattaacttc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836838 77 + 2368649 GATCTCAAGCATCAAGCATTTTTGTCTACAACATTCTTCCTTCCTACCTACAGCCAGTGCTTTATATAATTAACTTC i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 964154 75 - 2196201 GATCG-CAGCAGCAAGCACTTTCACCTAGAACGTTTTTCCTTCCTACCTATAACCCACGCTTTATAGAG-CAACTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3360276 77 - 5030052 GATCGCCAGCAGCAAGCACTTACGCCTAGAACACTTTTCCTTCCTACCTATAACCCATGCTTTATAGAGTTAACTTC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16908168 77 - 59632846 TATCTCTTATATCAAAGATTTTTGTCTAAAACATTCTTCCTTTATACTCATAATCAATGcttcacatgggttatttc i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413670 61 - 2520184 tatctcttgcatcagagatttttgtccaga---------------acctgcatcccat-cttaatatgggtgactgc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e macNem1.NW_012013133v1 24279667 4279 - 25927173 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=893254.000000 s hg38.chr4_KI270789v1_alt 71589 106 + 205944 tattcctcatttttatcttcatttcgagtaacagacttgggaaaa-tcttccataaattcgtaagtttaagtggagaagccct--tatgtgtgtgtccacagtatccca s panTro5.chr4 192863254 106 + 194502333 tattcctcatttttatcttcatttcgagtaatagacttgggaaaa-tcttccataaattcataagtttaagtgaagaaaccct--tatgtgtgtgtccacagtatccca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747018 106 + 195804263 tattcctcatttttatcttcatttcgagtaatagacttgggaaaa-tcttccataaattcataagtttaagtgaagaaaccct--tatgtgtgtgtccacagtatccca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783492 106 + 4876863 tattcctcatttttatcttcatttcgagtaatagacttgggaaaa-tcttccataaattcataagtttaagtgaagaaaccct--tatgtgtgtgtccacagtatccca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669160 106 + 115148730 tattcctcatttttatcttcatttcgagtaatacacttgggaaaa-tcttccataaattcataagtttaagtgaagaaaccct--tacgtgtgtgtccacagtatccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954363 107 + 190429646 TATTCCTCATTTTTTTCTTCATTTTGAGTAATAGACTTGGGAAAAGTCTTCCATAAATTCGTAAGTTTAAGTGAAGAAACCCT--TACGTGTGTGTCTGTCGTATCCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901826 107 + 189454096 TATTCCTCATTTTTTTCTTCATTTTGAGTAATAGACTTGGGAAAAGTCTTCCATAAATTCGTAAGTTTAAGTGAAGAAACCCT--TACGTGTGTGTCTGTAGTATCCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24283946 107 - 25927173 TATTCCTCATTTTTTTCTTCATTTTGAGTAATAGACTTGGGAAAAGTCTTCCATAAATTCGTAAGTTTAAGTGAAGAAACCCT--TACGTGTGTGTCTGTAGTATCCCA i macNem1.NW_012013133v1 I 4279 C 0 s cerAty1.NW_012001672v1 3317946 107 + 4669795 TATTCCTCATTTTTTTCTTCATTTTGAGTAATAGACTTGGGAAAAGTCTTCCATAAATTCGTAACTTCAAGTGAAGAAACCCT--TGTATGTGTGTCCACAGTATCCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278149 107 + 135778131 TATTCCTCATTTTTTTCTCCATTTTGAGTAATAGACTTGGGAAAAGTCTTCCATAAATTCGTAAGTTTAAGTGAAGAAACCCT--TACGTGTGTGTCCATAGTATCCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2715038 107 - 2847728 tattcatcatttttttcttcattttgagtaatagacttgggaaaagtcttccataaattcataagttcaagtgaagaaaccct--tgtgtgtgtgtccacagtatccca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 836915 107 + 2368649 TATTCCTCATTTTCTTCTTCATTTTGAATAATAGACTTGGGAAAAGTCTTCCATAAATTCATAAGTTTAAGTGAAGAAACCCT--TACGTGTGTGTCTACAGTATCCCA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 964229 105 - 2196201 TATTCTTCATTTTTATCCTCATTCCAAGTAATGGACTTGGGAAAAGTCTTCCATAATTTCAT--GTTTAAGTGAGGAAACCCT--TATGTGTGTGTCCGTAGTACCCCA i cebCap1.NW_016107886v1 C 0 I 3545 s aotNan1.NW_018492112v1 3360353 105 - 5030052 TATTCTTCACTTTTATCCTCATTCCAAGTAATAGACTTGGGAAAAGTCTTCCATAAGTTCAT--GTTTAAGTGAGGAAACCCT--CATGTGTGTGTCCGTAGTATCCCA i aotNan1.NW_018492112v1 C 0 I 1892 s canFam3.chr16 16908245 107 - 59632846 tattcatcctttagatcttcattttgggtaataggctcaggaaaaatcttccttatcttc--aaatttaagtgaggaaatccttatatatgtgtgtccacagtatctaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413731 99 - 2520184 --tttcattctttagagctcatttc-agta-----ctttcatgaagtcttccataaatccctaagtttaagctaagaaatgct--catgtatgtgctcatagcattcca i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=511505.000000 s hg38.chr4_KI270789v1_alt 71695 118 + 205944 tagcgcttggtactgtgttaccataacac--acaccactgccttgtcattgtct------a--tttaccaccagactaag---tccaag----aggcttc--tt--ttttgttttgtttt--------gttttgtgtttgtt----tgttt s panTro5.chr4 192863360 122 + 194502333 tagcgcttggtactgtgttaccataacacttatatcattgccttgtcattgtct------a--tttaccaccagactaag---tccaag----aggcttt--tttgttttgttttgtttt--------gttttgtgtttgtt----tgttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747124 120 + 195804263 tagcgcttggtactgtgttaccataacacttatatcattgccttgtcattgtct------a--tttaccaccagactaag---tccaag----aggcttc--tt--ttttgttttgtttt--------gttttgtgtttgtt----tgttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783598 118 + 4876863 tagcgcttggtactgtgttaccataacac--atatcattgccttgtcattgtct------a--tttaccaccagactaag---tccaag----aggcttc--tt--ttttgttttgtttt--------gttttgtgtttgtt----tgttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669266 107 + 115148730 tagcgcttggta---------cataac----atatcattgccttgtcattgtct------g--tttaccaccagactaag---tccaag----aggcttc--tt--ttttgttttgtttt--------gttttgtgtttgtt----tgttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954470 105 + 190429646 TAGCGCTCGGGACTGCGTTATCATAACACTTGTATCATTGCCTCGtcattgtct------a--tttaccaccagattaag---tcccag----aggcttc--tt--ttttgttg-----------------------ttgtt----tgttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187901933 105 + 189454096 TAGCGCTCGGGACTGCGTTATCATAACACTTGTATCATTGCCTTGtcattgtct------a--tttaccaccagattaag---tcccag----aggcttc--tt--ttttgttg-----------------------ttgtt----tgttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24284053 105 - 25927173 TAGCGCTCGGGACTGCGTTATCATAACACTTGTATCATTGCCTCGtcattgtct------a--tttaccaccagattaag---tcccag----aggcttc--tt--ttttgttg-----------------------ttgtt----tgttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3318053 107 + 4669795 TAGCGCTCGGGACTGTGTTAGCATAACACTTGTATCATTGCCTCGtcactgtct------a--tttaccaccagattaag---tcccag----aggcttc-ttt--ttttgttg----------------------tttgtt----tgttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278256 109 + 135778131 TAGTGCTCGGGACTGTGTTATCATAACACTTGTATCATTGCCTCGtcattgtct------a--tttactaccagattaag---tcccag----aggcttc--tt--ttttgttgt-------------------tgtttggt----tgttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2715145 110 - 2847728 tagcgcttgggactgtgttatcataacacttgtatcattgcctcgtcattgttt------g--tttaccaccagattaag---tcccag----aggcttc-ttt--ttttgttgt-------------------tgtttgtt----tgttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 837022 111 + 2368649 TAGCGCTCGGTACTGTGTTATCATAACACTTGTATCATTGCCTCGtcattgtct------a--tttaccaccagattaag---tcccag----aggcttctttt--ttttgttgt-------------------tgtttgtt----tgttt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16908352 136 - 59632846 tagtattttgtattttattgtcagaac--ttgtataaaatgcctataactatct------aggttctccagaatactaag---ctctgagggcaggcttc--at--gtctattttggtctctgttctaatcttgtgcctatcacagtgctt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1413830 131 - 2520184 tag-acttcacatccgactgtcataacacgtatgacattgcctcgtaattgtccctcgtaa--ttccccaggagatggagctcccccag-ggcgggctgc--at--gtctatcttgtccc--------ctgttctattcctg----tgcct i dasNov3.JH570353 C 0 I 3425 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=42773.000000 s hg38.chr4_KI270789v1_alt 71813 7 + 205944 gagatgg s panTro5.chr4 192863482 7 + 194502333 gagatgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747244 7 + 195804263 gagatgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783716 7 + 4876863 cagatgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669373 7 + 115148730 gagatgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954575 7 + 190429646 gagatgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187902038 7 + 189454096 gagatgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24284158 7 - 25927173 gagatgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3318160 7 + 4669795 gagatga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278365 7 + 135778131 gagatgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2715255 7 - 2847728 gagatga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 837133 7 + 2368649 gagatgg i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16908488 7 - 59632846 aacatgg i canFam3.chr16 C 0 I 3034 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=2159480.000000 s hg38.chr4_KI270789v1_alt 71820 386 + 205944 agtcttacactgtcgcctgggctggagtgcaatagcgtgaccttggctcactgcaacctccacctcctgagttcacgcgattctcctacctcagcctcccgagtagctgggattacaggtgcgcattaccacgcccggctaattttt-tgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatccgcccacctcagcctcctaaagtgctgggattacaggtgtgagccaccgcgcccagccccaagaggcttcttgtaggtcttgtctgttgttctattctagtgccttgcacagtgcttgaaatatggaagAATCTGTAAAAAATCATATTGAGTAcagttggctctctgga s panTro5.chr4 192863489 386 + 194502333 agtcttacactgtcgcctgggctggagggcaatagcgtgaccttggctcactgcaacctccacctcctgggttcacgcgattctcctacctcagcctcccgagtagctgggattacaggtgcgcattaccacgcccggctaattttt-tgtgtttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatctgcccacctcagcctcctaaagtgctgggattacaggtgtgagccaccgcgcccagccccaagaggcttcttgtaggtcttgtctgttgttctattctagtgccttgcacactgcttgaaatatggaagAATCTGTAAAAAATCATATTGAGTAcagttggctctctgga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747251 386 + 195804263 agtcttacactgtcgcctgggctggagggcaatagcgtgaccttggctcactgcaacctccacctcctgggttcacgcgattctcctacctcagcctcccgagtagctgggattacaggtgcgcattaccacgcccggctaattttt-tgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatctgcccacctcagcctcctaaagtgctgggattacaggtgtgagccaccgcgcccagccccaagaggcttcttgtaggtcttgtctgttgttctattctagtgccttgcacactgcttgaaatatggaagAATCTGTAAAAAATCATATTGAGTAcagttggctctctgga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3783723 385 + 4876863 agtcttacactgtcgcctggactggagggcaatagcgtgaccttggctcactgcaacctccacctcctgggttcacgcgattctcctacctcagcctcccgagtagctgggattacaggtgcacattaccacgcccggctaattttt-tgtatttttagtagcgatgggatttcactatgttggccagactggtctcaaactcctgaccttgtgatccgcccacctcagcctcctaaagtgctgggattacaggtgtgagccaccgcgcccagccccaagaggcttcttgtaggtcttgtctgttgttctattctagtgccttgcacagtgcttgaaatatggaagAATCTGTAAAAAATCATA-TGAGTAcagttggctctctgga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669380 387 + 115148730 agtcttacactgtcgcccgggctggaatgcaatggcgtgatcttggctcactgcaacctccacctcctgggttcacgcaattctcctacctcagcctcccgagtagctgggattacaggtgcacactaccacgcccggctaatttttctgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagccccaagaggcttcttgtaggtcttgtctgttgttctatcccagtgccttgcacagtgcttgaaatatagaagAATCTGTAGAAAATCATATTGAGTAcagttggctctctgga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954582 385 + 190429646 agtcttacagtgtcacccaggctggagtgcagtagcgtgacctcggctcactgcaacctccgcctcctggattcacgtgattctcttacctcaacctcccgagtaggtggcattacaggtgcatgccaccatg-ctggctaacttct-tgtatttttagtagagatggggtttcactgtgttggccagactggtctcaaactcctgaccttgtgatccgcctgtctcagcttcccaaagtgctgggattacaggcgtgagctactgcgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagccttgcacagtgcttgaaatatggaagAATCTGTAAAAATTCATATTGAGTAcagctggctctctgga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187902045 385 + 189454096 agtcttacagtgtcacccaggctggagtgcagtagcgtgacctcggctcactgcaacctccgcctcctggattcacgtgattctcttacctcaacctcccgagtaggtggcattacaggtgcatgccaccacg-ctggctaacttct-tgtatttttagtagagatggggtttcactgtgttggccagactggtctcaaactcctgaccttgtgatccgcctgtctcagcttcccaaagtgctgggattacaggcgtgagctactgcgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagccttgcacagtgcttgaaatatggaagAATCTGTAAAAATTCATATTGAGTAcagctggctctctgga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24284165 385 - 25927173 agtcttacagtgtcacccaggctggagtgcagtagcgtgacctcggctcactgcaacctccgcctcctggattcacgtgattctcttacctcaacctcccgagtaggtggcattacaggtgcatgccaccacg-ctggctaacttct-tgtatttttagtagagatggggtttcactgtgttggccagactggtctcaaactcctgaccttgtgatccgcctgtctcagcttcccaaagtgctgggattacaggcgtgagctactgcgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagccttgcacagtgcttgaaatatggaagaatctgtaaaaattcatattgagtAcagctggctctctgga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3318167 385 + 4669795 agtcttacagtatcacccaggctggagtgcaatagcgtgaccttggctcactgcaacctccgcctcctgggttcatgtgattctcttgcctcaacctcccaagtagctgggattacaggtgcacaccaccacg-ccggctaattttt-tgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatccgcctgtctcagcttcccaaagtgctgggattacagacacgagccactgcgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagcctggcacagtgcttgaaatatggaagaatctgtaaaaattcatattgagtAcagttgtctctctgga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278372 385 + 135778131 agtcttacagtgtcacccaggctggagtgcagtagcgtgacctcagctcactgcaacctccgcctcctggattcatgtgattctcttacctcaacctcccgagtaggtgggattacaggtgcatgccaccacg-ctggctaacttct-tgtatttttagtagagatgtggtttcactgtgttggccagactggtctcaaactcctgaccttgtgatctgcctgtctcagcttcccaaagtgctgggattacaggcgtgagccactgtgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagccttgcacagtgcttgaaatatggaagaatctgtaaaaattcatattgagtAcagctggctctctgga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2715262 385 - 2847728 agtcttacagtgtcacccaggctggagtgcaatagcgtgaccttggctcactgcaacctccgcctcctgggttcacgtgattctctcgcctcaacctcccaagtagctgggattacagttgcacaccaccacg-ccggctaattttt-tgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatccgcctgtctcagcttcccaaagtgctgggattacagacatgagccactgcgcacagccccaagaggcttgttgtaggtcttgtctgttgttctattctagagccttgcacagtgcttgaaatatggAAAAATCTGTAAAAATTCGTATTGAGTAcagttggctctctgga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 837140 385 + 2368649 agtcttacactgtcacccaggctggagtgcaatagcgtgaccttggctcactgcaacctccgcctcctgggttcacgtgattctcttacctcaaactcccgagtagctgggattacaggtgcacaccaccatg-ccggctaattttt-tgtatttttagtagagatggggtttcactatgttggccagactggtctcaaactcctgaccttgtgatccacctatctcagcttcccaaagtgctgggattacaggcgtgagccactgcgcccagccccaagaggcttgttgtaggtcttgtccgttgttctattctagagccttgcacagtgcttgaaatatggaagAATCTGTAAAAATTCACATTGAGTACAGTTGGCTCTCTGGA i colAng1.NW_012116221v1 C 0 M 8832 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=493725.000000 s hg38.chr4_KI270789v1_alt 72206 111 + 205944 tccgtgggctccacatccttggattcaaccaactgtagattgaaaatattcaaaaa-ttaaaaaaaaatcgcatctgtactgagcaggtacagacttttttcttgtcattat s panTro5.chr4 192863875 110 + 194502333 tccgtgggctccacatccttggattcaaccaactgtagattgaaaatattcaaaaa-tt-ttaaaaaatcgcatctgtagtgagcaggtacagacttttttcttgtcattat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747637 110 + 195804263 tccgtgggctccacatccttggattcaaccaactgtagattgaaaatattcaaaaa-tt-ttaaaaaatcgcatctgtagtgagcaggtacagacttttttcttgtcattat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784108 111 + 4876863 tccgtgggctccacatccttggattcaaccaactgtagattgaaaatattcaaaaa-ttaaaaaaaaatcgcatctgtactgagcaggtacagacttttttcttgtcattat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669767 111 + 115148730 tctgtgggctccacatccttggattcaaccaactgtagattgaaaatattcaaaaa-ttaaaaaaaaatcgcatctgtactgagcaggtacagacttttttcttgtcattat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188954967 110 + 190429646 tccaggggctccgtatccttggattcaaccaactgtagattgaaaatattcaaaaa-tt-aaaaataatcgcacctgtactgagcaggtacagacttttttcttgtcattat i rheMac8.chr5 C 0 I 61 s macFas5.chr5 187902430 110 + 189454096 tccaggggctccgtatccttggattcaaccaactgcagattgaaaatattcaaaaa-tt-aaaaataatcgcacctgtactgagcaggtacagacttttttcttgtcattat i macFas5.chr5 C 0 I 61 s macNem1.NW_012013133v1 24284550 110 - 25927173 tccaggggcttcgtatccttggattcaaccaactgtagattgaaaatattcaaaaa-tt-aaaaataatcgcacctgtactgagcaggtacagacttttttcttgtcattat i macNem1.NW_012013133v1 C 0 I 61 s cerAty1.NW_012001672v1 3318552 111 + 4669795 tccatgggctccatatccttggattcaaccaactgtagattgaaaatattgaaaagttt-aaaaaatatcgcatctgtactgagcaggtacagacttttttcttgtcattat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134278757 109 + 135778131 tccaggggctccgtatccttggattcaaccaactgtagattgaaaatattcaaaaa-tt-aaaaataatcgcatctgtactgagcaggtacagac-tttttcttgtcattat i chlSab2.chr7 C 0 I 56 s manLeu1.NW_012102221v1 2715647 111 - 2847728 tccatgggctccatagccttggattcaaccaactgtagattgaaaatattcagaagttt-aaaaaatatcgcatctgtactgagcaggtacagacttttttcttgtcattat i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e otoGar3.GL873580 11203743 5920 - 11315646 I a score=21438.000000 s hg38.chr4_KI270789v1_alt 72317 12 + 205944 tccttaaacgaa s panTro5.chr4 192863985 12 + 194502333 tccttaaacgaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747747 12 + 195804263 tccttaaacgaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784219 12 + 4876863 tccttaaacgaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669878 12 + 115148730 tccttaaacgaa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3318663 12 + 4669795 tccttaaaggaa i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2715758 12 - 2847728 tccttaaaggaa i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e chlSab2.chr7 134278866 56 + 135778131 I e macNem1.NW_012013133v1 24284660 61 - 25927173 I e macFas5.chr5 187902540 61 + 189454096 I e rheMac8.chr5 188955077 61 + 190429646 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=2839706.000000 s hg38.chr4_KI270789v1_alt 72329 636 + 205944 accgtataacaactattcacatagcatttacattgtattaggtattctaagtaatctagagatgattaaagaaaaagcgaggatgtgtgtagcttatatg-aaatagtgtgccttgttatatcagggacttgagcatctgtagattttggtgtctttgggggtcctagagccactcccctgcggatacggagggatgagtgTATGgaggtggtaaatgacttgctccaggtcacattagtgagtgaaagagcaagggatgtgctctcggccattcagttctagaatctgtgcatttaaccacgatgcatataGCCAGACACAGAGCTGTTATTCCAAAACACTGAGAATTAGTAACAAGGGCTCTTTAAACTATTGGATCTAAACT-AATTTCAACTAGATTAAATCTACTTCATTACTTTTTACAAATGTTGTTTCCTGGGTGGGGCCTTTT-GGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAA-TGAATTTCATCCAAAATACA-TTTTCTGCAGATTTAAATGTCTGTGtatattacatatacacgcatctgtatctatgcatgtctttacatagatatatccataaatgtatatgttatataCAGCGTATTAGGGATAGTTCTCCAGAG--A s panTro5.chr4 192863997 632 + 194502333 accgtataacaactattcacatagcatttacattgtattaagtattctaagtaatctagagatgattaaagaaaaagagaggatgtgtgtagcttatatg-aaatagtgtgccctgttatatcagggacttgagcatctgtagattttggtgtc--tgggggtcctagagccactcccctgtggatacagagggatgagtgTATGgaggtggtaaatgacttgctctaggtcacattagtgagtgaaagagcaagggatgtgccctcggccattcagttctagaatctgtgcatttaaccacgatgcatataGCCAGACACAGAGCTGTTATTCCAAAACACTGAGAATTAGTAACAAGGGCTCTTTAAACTATTGGATCTAAACT-AATTTCAACCAGATTAAATCTATTTCATTACTTTTTACAAATGTTGTTTCCTGGGTGGGGCCTTTT-GGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAA-TGAATTTCATCCAAAATACA-TTTTCTGCAGATTTAAATGTCTGTGtatattacatatacacgcatctgtatctatgcatgtctttacat--atatacccataaatgtatatgttatataCAGCGTATTAGGGATAGTTCTCCAGAG--A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192747759 632 + 195804263 accgtataacaactattcacatagcatttacattgtattaagtattctaagtaatctagagatgattaaagaaaaagagaggatgtgtgtagcttatatg-aaatagtgtgccctgttatatcagggacttgagcatctgtagattttggtgtc--tgggggtcctagagccactcccctgtggatacagagggatgagtgTATGgaggtggtaaatgacttgctctaggtcacattagtgagtgaaagagcaagggatgtgccctcggccattcagttctagaatctgtgcatttaaccacgatgcatataGCCAGACACAGAGCTGTTATTCCAAAACACTGAGAATTAGTAACAAGGGCTCTTTAAACTATTGGATCTAAACT-AATTTCAACCAGATTAAATCTATTTCATTACTTTTTACAAATGTTGTTTCCTGGGTGGGGCCTTTT-GGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAA-TGAATTTCATCCAAAATACA-TTTTCTGCAGATTTAAATGTCTGTGtatattacatatacacgcatctgtatctatgcatgtctttacat--atatacccataaatgtatatgttatataCAGCGTATTAGGGATAGTTCTCCAGAG--A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784231 636 + 4876863 accgtataacaactattcacatagaatttacattgtattaggtattctaagtaatctagagatgattaaagaaaaagcgaggatgtgtgtagcttatatg-aaatagtgtgccctgttatatcagggacttgagcatctgtagattttggtgtctttgggggtcctagagccactcccctgtggatacggagggatgagtgTATGgaggtggtaaatgacttgctccaggtcacattagtgagtgaaagagcaagggatgtgccctcggccattcagttctagaatctgtgcatttaaccctgatgcatataGCCAGACACAGAGCTGTCATTCCAAAACACTGAGAATTAGTAACAAGGGCTCTTTAAACTATTGGATCTAAACT-AATTTCAACCAGATTAAATCTATTTCATTACTTTTTACAAATGTTGTTTCCTGGGTGGGGCCTTTT-GGAGTGATGAAGTTAATTATGAAATAAAAATGGAAAAA-TGTATTTCATCCAAAATACA-TTTTCTGCAGATTTAAATGTCTGTGTATATTACATATACACGCATCTGTATCTATGCATGTCTTTACATAGATATACCCATAAATGTATATGTTATATACAGCGTATTAGGGATAGTTCTCCAGAG--A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112669890 636 + 115148730 accgtataacaactattcacatagcatttacattgtattaggtattctaagtaatctagaaatgattaaaggaaaagcgagga--tgtgtagcttatgtg-aaatagtgtgccctgttatatcagggacttgagcatctttagattttggtgtctttgggggtcctagagccattcccctgtggatacggagggatgagtgTATGgaggtggtaaatgacttgctccaggtcacattaatgagtgaaagtgcaagggatgtgccctcggccgttcagttctagaatctgtgcatttaaccacgatgcatataGCCAGACATAGAGCTGTTATTCCAAAACACTGAGAATTAGTAACAAGGGCTCTTTAAACTATTGGATCTAAACTCAATTTCAACCAGATTAAATCTATTTCATTACTTTTTACAAATGTTGTTTTCTGGGTGGGGCCTTTT-GGAAGGATGAAGTTAATTATGAAATAAAAATGGAAAAA-TGAATTTCATCCAAAATACATTTTTCTGCAGATTTAAATGTCTGTGTATATTACATATACACGCATTTCTATATATGCACATCTTGACATAGATATACCCATAAATGTATATGTTATACACAGTGTATTAGGGATAGTTCCCCAGAG--A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188955138 632 + 190429646 atcgtgtaacaactattcacatagcatttacattgtattaggtattctaag-----tagagatggctaaggaaaaagcgaggatgtgtgtagcttgtgtacaaatagtgtgcccttttatatcagggacttgagcatctgtagtttttgatgtctttgggggtcctagagccactcccctgtgaat-cggagggatgaatgTATTgaggtggtaaatgactcgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcagttctagaatctgtgcatttaaccacgatgcATATGGCCAGACACAGAGCTGTTATTGCAAAACACTAAGAATTGGTAACAAGGGCTCTTTAAACTATTGGATCTAATCCCAATTTCAACCAGATTAAATCTATATCATTACTTTTTACAAATGTTGTTTCCTGGGTGAGGCCTTTTTGGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAATTGAATTTCGTCCAAAATACA-TCTTCTGCAGatataaatgtc-gtgtatattatatatacatgcatctgtatatatggacatctttacatagatatacccataaatgtgtatgttatatacaatgtatTAGGGAGAGTTCTCCAGAG--- i rheMac8.chr5 I 61 C 0 s macFas5.chr5 187902601 637 + 189454096 atcgtgtaacaactattcacatagcatttacattgtattaggtattctaagtaatctagagatggctaaggaaaaagcgaggatgtgtgtagcttgtatacaaatagtgtgcccttttatatcagggacttgagcatctgtagtttttgatgtctttgggggtcctagagccactcccctgtgaat-cggagggatgaatgTATTgaggtggtaaatgactcgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcagttctagaatctgtgcatttaaccacgatgcATATGGCCAGACACAGAGCTGTTATTCCAGAACACTAAGAATTGGTAACAAGGGCTCTTTAAACTATTGGATCTAATCCCAATTTCAACCAGATTAAATCTATATCATTACTTTTTACAAATGTTGTTTCCTGGGTGAGGCCTTTTTGGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAATTGAATTTCGTCCAAAATACA-TCTTCTGCAGATATGAATGTC-GTGtatattatatatacacgcatctgtatatatgcacatctttacatagatatacccataaatgtgtatgttatatacaatgtatTAGGGAGAGTTCTCCAGAG--- i macFas5.chr5 I 61 C 0 s macNem1.NW_012013133v1 24284721 637 - 25927173 atcgtgtaacaactattcacatagcatttacattgtattaggtattctaagtaatctagagatggctaaggaaaaagcgaggatgtgtgtagcttgtatacaaatagtgtgcccttttatatcagggacttgagcatctgtagtttttgatgtctttgggggtcctagagccactcccctgtgaat-cggagggatgaatgTATTgaggtagtaaatgactcgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcagttctagaatctgtgcatttaaccacgatgcATATGGCCAGACACAGAGCTGTTATTCCAAAACACTAAGAATTGGTAACAAGGGCTCTTTAAACTATTGGATCTAATCCCAATTTCAACCAGATTAAATCTATATCATTACTTTTTACAAATGTTGTTTCCTGGGTAAGGCCTTTTTGGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAATTGAATTTCGTCCAAAATACA-TCTTCTGCAGATATGAATGTC-GTGtatattatatatacacgcatctgtatatatgcacatctttacatagatatacccataaatgtgtatgttatatacaatgtatTAGGGAGAGTTCTCCAGAG--- i macNem1.NW_012013133v1 I 61 C 0 s cerAty1.NW_012001672v1 3318675 628 + 4669795 atcgtgtaacaactattcacatagcatttacattgtattaggtattctaagtaatctagagatgactaaggaaaaagcgaggatgtgtgtagcttgtatacaaatagtgtgcccttttatatcagggacttgaggttctgtagttttttatgtctttgggggtcctagagccactcccctgcg-----ggagggatgaaggtatggaggtggtaaatgactcgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcagttctagaatctgtgcatttaaccacgatgcATATGGCCAGACACAGAGCTGTTATTCCAAAACACTAAGAATTGGTAACAAAGGCTCTTTACACTATTGGATCTAATCCCAATTTCAGCCAGATTAA------ATCATTACTTTTTACAAATGTTGTTTCCTGGGTGAGGGCTTTTGGGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAATTGAATTTGGTCCAAAATACA-TTTTCTGCAGatataaatgtc-atgtgtattatatatacacgcatctgtatatatgcacatctttacatagatatacccataaatatatatgttatatacaatgtatTAGGGAGAGTTCTCCAGAGA-- i cerAty1.NW_012001672v1 C 0 I 810 s chlSab2.chr7 134278922 639 + 135778131 atcgtgtaacagctattcacatagcatttacattgtattaggtattctaagtaatctagagatggctaaggaaaaagcgaggatgtgtgtagcttgtatacaaatagtgtgcccttttatatcagggacttgagcatctgtagtttttgatgtctttgggggtcctagagccactcccctgtggatacggagggatgaatgTATTgaggtggtaaatgacttgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcagttctagaatctatgcatttaaccacgatgcATATGGCCAGACACAGAGCTGTTATTCCAGAACACTAAGAATTGGTAACAAGGGCTCTTTCAACTATTGAATCTAATCCCAATTTCAACCAGATTAAATCTATATCATTACTTTTTACAAATGTTGTTTCCTGGGTGAGGCCTTTTTGGAATGATGAAGTTAATTATGAAATAAAAACGGAAAAATTGAATTTCGTCCAAAATACA-TCTTCTGCAGatataaatgtc-gtgtatattatatatatatgcatctgtatatatgcacatctttacatagatatacccataaatgtgtatgttatatacaatgtatTAGGGAGAGTTCTCCAGAG-A- i chlSab2.chr7 I 56 C 0 s manLeu1.NW_012102221v1 2715770 629 - 2847728 atcgtgtaacaactattcacatagcatttacattgtattaggtattctaaggaatctagagatgactaaagaaaaagcgaggatgtgtgtagcttgtatacaaacagtgtgcccttttatatcagggacttgaggttctgtagtttttgatgtctttgggggtcctagagccactcccctgtggatacggagggatgaatgTATGgaggtggtaaatgactcgctccaggtcacactagtgagtaaaagagcaagggatgtgcccttggccattcaattctagaatctgtgcattaaaccacgatgcATATGGCCAGACACAGAGCTGTTATTCCAAAACACTAAGAATTGGTAACAAAGGCTCTTTAAAC--TTGGATCTAATCCCAATTTCAACCAGATTAA------ATCATTACTTTTTACAAATGTTGTTTCCTGGGTGAGGGCTTTTGGGAATGATGAAGTTAATTATGAAATAAAAATGGAAAAATTGAATTTGGTCCAAAATACA-TTTTCTGCAGatataaatgtc-atgtgtattatatatacacgcatctgtatatatgcacatctttacatagatatacccataaatgtatatgttatatacaatgtatTAGGGAGAGTTCTC--GAG-A- i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e otoGar3.GL873580 11203743 5920 - 11315646 I a score=43039.000000 s hg38.chr4_KI270789v1_alt 72965 29 + 205944 CAGAacacacgcacatatata--------------------------cacacaca s panTro5.chr4 192864629 55 + 194502333 CAGAacacacgcacatatatacacacacacacatatacacacacatccacacaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192748391 55 + 195804263 CAGAACacacgcacatatatacacacacacacatatacacacacatacacacaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784867 41 + 4876863 CAGAacacacgcacatatatacacacacacaca--------------tatacaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112670526 39 + 115148730 CAGAacacacacacacatatacacacacata----------------cacataca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188955770 28 + 190429646 -AGAacatacatacatacacacacacaca-------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187903238 28 + 189454096 -AGAacatacatacatacacacacacaca-------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24285358 28 - 25927173 -AGAacatacatacatacacacacacaca-------------------------- i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134279561 19 + 135778131 --GAacatatatacacacaca---------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2716399 19 - 2847728 --GAacatatacacacacaca---------------------------------- i manLeu1.NW_012102221v1 C 0 I 99 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e cerAty1.NW_012001672v1 3319303 810 + 4669795 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=26834.000000 s hg38.chr4_KI270789v1_alt 72994 15 + 205944 cacacccacaccctg s panTro5.chr4 192864684 15 + 194502333 cacacccacaccctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192748446 15 + 195804263 cacacccacaccctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784908 15 + 4876863 cacacccacaccctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112670565 15 + 115148730 cacccccacacccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188955798 15 + 190429646 tatacacacatcccc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187903266 15 + 189454096 tatacacacatcccc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24285386 15 - 25927173 tatacacacatcccc i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134279580 11 + 135778131 ----cacacatcaca i chlSab2.chr7 C 0 I 19 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e manLeu1.NW_012102221v1 2716418 99 - 2847728 I e cerAty1.NW_012001672v1 3319303 810 + 4669795 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=61679.000000 s hg38.chr4_KI270789v1_alt 73009 39 + 205944 gcgcacacacacacatccacacacacatatatgtgcaca s panTro5.chr4 192864699 39 + 194502333 gtgcacacacacacatccacacacacatatatatgcaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192748461 39 + 195804263 gtgcacacacacacatccacacacacatatatatgcaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3784923 39 + 4876863 gcgcgcacacacacatccacacacacatatatgtgcaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112670580 23 + 115148730 ----------------ccacacacacatatatatgcaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188955813 30 + 190429646 cgatatacacacacatccacatccacacac--------- i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187903281 30 + 189454096 cgatatacacacacatccacatccacacat--------- i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24285401 37 - 25927173 cgatatacacacacatccacatccacacatccacaca-- i macNem1.NW_012013133v1 C 0 I 2 s chlSab2.chr7 134279610 21 + 135778131 cgatatacacacacatccaca------------------ i chlSab2.chr7 I 19 I 2 s manLeu1.NW_012102221v1 2716517 37 - 2847728 cgatatacacacacatccacatccacacatccacaca-- i manLeu1.NW_012102221v1 I 99 I 4 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e cerAty1.NW_012001672v1 3319303 810 + 4669795 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=180730.000000 s hg38.chr4_KI270789v1_alt 73048 46 + 205944 --cat--acacacacacacacaca--cCCCgccaagcacctcgtaacaatgt s panTro5.chr4 192864738 44 + 194502333 --cat----acacacacacacaca--cCCCACcaagcacctcataacaatgt i panTro5.chr4 C 0 I 5 s panPan2.chr4 192748500 42 + 195804263 --cat------acacacacacaca--cCCCACcaagcacctcataacaatgt i panPan2.chr4 C 0 I 5 s gorGor5.CYUI01015356v1 3784962 48 + 4876863 --catacacacacacacacacaca--cCCCgccaagcacctcgtaacaatgt i gorGor5.CYUI01015356v1 C 0 I 5 s nomLeu3.chr7b 112670603 44 + 115148730 --cat----atacacacacacaca--ccctgccaagcacctcataacaatgt i nomLeu3.chr7b C 0 I 5 s rheMac8.chr5 188955844 44 + 190429646 --cat----acatacacacacaca--cCCTgtcaagcacctcgtaataatgt i rheMac8.chr5 I 1 I 5 s macFas5.chr5 187903312 44 + 189454096 --cat----acatacacacacaca--cCCTgtcaagcaccttgtaataatgt i macFas5.chr5 I 1 I 5 s macNem1.NW_012013133v1 24285440 44 - 25927173 --cat----acatacacacacaca--cCCTgtcaagcaccttgtaataatgt i macNem1.NW_012013133v1 I 2 I 245 s cerAty1.NW_012001672v1 3320113 46 + 4669795 --cat----acatacacacacacacCCCCTgtcaagcaccttgtaataatgt i cerAty1.NW_012001672v1 I 810 I 5 s chlSab2.chr7 134279633 46 + 135778131 cgcat----acatacacacacaca--cCCTgtcaagcaccttgtaataatgt i chlSab2.chr7 I 2 I 5 s manLeu1.NW_012102221v1 2716558 46 - 2847728 tacat----acagacacacacacC--CCCTgtcaagcaccttgtaataatgt i manLeu1.NW_012102221v1 I 4 I 5 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e otoGar3.GL873580 11203743 5920 - 11315646 I a score=5457072.000000 s hg38.chr4_KI270789v1_alt 73094 1248 + 205944 ttaacagaagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcatagtgcagcgcattactcacatgtttgtggtgatgctggtgtaaacaaatcgtgctgccggtcatataaaagtatagcacagcccaggcacggtggttcatgccagtaatcccagccctttgggaggccgaggttagtggatcacctgaggtcaggagtttgagactagcctggccaacataatgaaaccccgtctctactaaaaatacaaaaattcgccgggcatggtggtgcgtgcctatagtcccagctactctggaggctgcagcaggagaattgcttgaacccaggaggcggaggttgcaatgagccaagatcgtgccattgtactccagcttgggcaatagagctagactccatctgaaaaaaaaaaaa-tatagcacatgtaattatgtacagtacatatttgacaataataataaatgactgttacctgtttatgtgtttactatatcgtatgttttatcattatggtagagtgtatttctacttacaaaaacagtg--aactgtaaagcagcctcaggtacctccttaaggagctcttccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttcccgtgggacaagatggaggtggaagacagtgatattcatgatgctgacccccgtgtaggcctaggctaatgtgtgtttgtgtattagtttaaaaaactaaaaattaataaacatagaggaaaacttatagagatat----aaagaaaatatttttctgcagctgtacaatatgcctatgtttcaagctaagtgttattacaaaatagtcaaaaggttaaaacagtcaaaaggttaaaattaaaagtttatgaagtgaaaatgttacatcagccaactttaatttattaaggaaggaagagcgtttcttttttaatgatgtagtgtagcctctaagtagttttcatgaagtttgcagttgttacccagaccttcataggcgctcactactcactcagtgacttacccagagtagcttccagtccttcaagctctattcatgtgaagtgaactacacaggtataccagtttttatattttataccataattttaccgtcccttttctatgtttgggtacacaaataccattgtgtttccgttgcc s panTro5.chr4 192864787 1248 + 194502333 ttaacagaagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcatagtgcagcgcattactcacatgtttgtggtgatgctggtgtaaacaaatcgtgctgctggtcatataaaagtatagcacagcccaggcacggtggttcatgccagtaatcccagccctttgggaggccgaggttagtggatcacctgaggtcaggagtttgagactagcctggtcaacataatgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggtgcgtgcctatagtcccagctactctggaggctgcagcaggagaattgcttgaacccaggaggcggaggttgcagtgagccaagatcgcgccattgtactccagcttgggcaatagagctagactccatctgaaaaaaaaaaaagtatagcacatgtaattatgtacagtacatatttgacaataataataaatgactgttacctgtttatgtgtttactatatcgtatgttttatcattatggtagagtgtatttctacttacaaaaatagtg--aactgtaaagcagcctcaggtacctccttaaggagctcttccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttcccgtgggacaagatggaggtggaagacagtgatattcatgatgctgacccccgtgtaggcctaggctaatgtgtgtttgtgtattagtttaaaaaactaaaaattaataaacatagaggaaaacttatagagatat----aaagaaaatatttttctgcagctgtacaatatgcctatgtttcaagctaagtgttattataaaatagtcaaaaggttaaaacagtcaaaaggttaaaattaaaagtttatgaagtgaaaatgttacatcagccaactttaatttattattgaaggaagagcgtttcttttttaatgatgtagtgtagcctctaagtagttttcatgaagtttgcagttgttacccagaccttcataggcgctcactactcactcagtgacttacccagagtagcttccagtccttcaagctctgttcatgtgaagtgaact-cacaggtataccagtttttatattttataccataattttaccgtcccttttctatgtttgggtacacaaataccattgtgtttccgttgcc i panTro5.chr4 I 5 C 0 s panPan2.chr4 192748547 1243 + 195804263 ttaacagaagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcatagtgcagcgcattactcacatgtttgtggtgatgctggtgtaaacaaatcgtgctgccggtcatataaaagtatagcacagcccaggcacggtggttcatgccaataatcccagccctttgggaggccgaggttagtggatcacctgaggtcaggagtttgagactagcctggccaacataatgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggtgcgtgcctatagtcccagctactctggaggctgcagcaggagaattgcttgaacccaggaggcggaggttgcagtgagccaagatcgcgccattgtactccagcttgggcaatagagctagactccatctgaaaaaaaaaaag-tatagcacatgtaattatgtacagtacatatttgacaataataataaa----tgttacctgtttatgtgtttactatatcgtatgttttatcattatggtagagtgtatttctacttacaaaaatagtg--aactgtaaagcagcctcaggtacctccttaaggagctcttccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttcccgtgggacaagatggaggtggaagacagtgatattcatgatgctgacccccgtgtaggcctaggctaatgtgtgtttgtgtattagtttaaaaaactaaaaattaataaacatagaggaaaacttatagagatat----aaagaaaatatttttctgcagctgtacaatatgcctatgtttcaagctaagtgttattataaaatagtcaaaaggttaaaacagtcaaaaggttaaaattaaaagtttatgaagtgaaaatgttacatcagccaactttaatttattattgaaggaagagcgtttcttttttaatgatgtagtgtagcctctaagtagttttcatgaagtttgcagttgttacccagaccttcataggcgctcactactcactcagtgacttacccagagtagcttccagtccttcaagctctgttcatgtgaagtgaact-cacaggtataccagtttttatattttataccataattttaccgtcccttttctatgtttgggtacacaaataccattgtgtttccgttgcc i panPan2.chr4 I 5 C 0 s gorGor5.CYUI01015356v1 3785015 1237 + 4876863 ttaacagaagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcatagtgcagcgcattactcacatgtttgtgttgatgctggtgtaaacaaatcgtgctgccggtcatataaaagtacagcacagcccaggcacggtggttcatgccagtaatcccagccctttgggaggccgaggttagtggatcacctgaggtcaggagtttgagactagcctggccaacataatgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggtgcgtgcctatagtcccagctactctggaggctgcagcaggagaattgcttgaacccaggaggcggaggttgcagtgagccaagatcgcgccattgtactccagcttgggcaatagagctagactccatgtgaaaaaaaaaaag-tatagcacatgtaattatgtacagtacatatttgacaataataataaatgactgttacctgtttatgtgtttactatatcgtatgttttatcattatggtagagtgtatttctacttacaaaaacagtg--aactgtaaagcagcctcaggtacctccttaaggagctcttccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttcccgtgggacaagatggaggtggaaga----------catgatgctga-ccccgtgtaggcctaggctaatgtgtgtttgtgtattagtttaaaaaactaaaaattaataaacatagaggaaaacttatagagatat----aaagaaaatatttttctgcagctgtacaatatgcctatgtttcaagctaagtgttattataaaatagtcaaaaggttaaaacagtcaaaaggttaaaattaaaagtttatgcagtgaaaatgttacatcagccaactttaatttattattgaaggaagagcgtttcttttttaatgatgtagtgtagcctctaagtagttttcatgaagtttgaagttgttacccagaccttcataggcgctcactactcactcactgacttacccagagtagcttccagtcctgcaagctctattcatgtgaagtgaactacacaggtataccagtttttatattttataccataattttaccgtcccttttctatgtttgggtacacaaataccattgtgtttccgttgcc i gorGor5.CYUI01015356v1 I 5 C 0 s nomLeu3.chr7b 112670652 1229 + 115148730 ttaacagaagaccacatagacaatggtggtaacatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtagccagaataaagtcatagtgcagcacattactcatatgtttgtggtgatgctggtgtaaataaatcgtgctgccggtcatataaaagtatagcacagcccaggcatggtggttcatgccagtaatcccagccctttgggaggccgaggttagtggatcacctgaggtcaggagtttcagactagcctggccaacataatgaaagc-------------aacaacaaaaattaaccgggcatggtggtgcgtgcctgtagtcccagctactctggaggctgcagcaggagaattgcttgaacccaggaggtggaggttgcaatgagccaagatcgctccattgtactccagcttgggcaatagagctagactccatctgaaaaaaaaag---tatagcacatgtaattatgtacagtacatatttgacaataatagtaaatgactgttacctgtttatgtgtttactatatcctatgttttatcattatggtagagtgtatttctacttataaaaacagtg--aactgtaaagcagcctcagttacctccttgaggagctcttccagaagccattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttcctgtgggacaagatagaggtggaagacagtgatattcatgatgctga-ccctgtgtaggcctaggctaacgtgtgtttgtgtattagtttaaaaaactaaaaattaataaacatagaggaaaacttatagagatataaaaaaagaaaatatttttctgcagctgtacaatatgcctatgtttcaagctaagtgtt------aaatagtccaaaggttaaaacagtcaaaaggttaaaattaaaagtttatgaagtgaaaatgttacatcagccaactttaatttattattgaaggaagagcatttcttttttaatgatgtagtgtagcctctaagtagttttcatgaagtttgcagttgttgcccaggccttcataggcactcactactcactcactgacttacccagagtagcttccagt-ctgcaagctctattcatgtgaagtgaactacacaggtatactagtttttatattttataccataattttaccgtcctttttctatgtttgggtacacaaataccattgtgttcccgttgcc i nomLeu3.chr7b I 5 C 0 s rheMac8.chr5 188955893 1218 + 190429646 ttaacaggagaccacatagacaatggtggtaccataacatgagattctagtggagctggaaaattcctgttgcctggtgatgctgtggccagaataaagtcatagtgtggcacattactcacgtgtttgtggtgatgctcatgtaaacaaatcgtgctgccggtcatataaacgcatagcacaggctgggcgtggttgctcactcctgtaatcccagcactttgggaagccaaggttagtggattacctgagttcaggagtttgagactagcctggccaacatagtggaaccccgcctctactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgttatcccagctactctggaggctgcggcaggataatggcttgaacctgggatgtggagcttgtggtgagctgagatcacaccattgctctccagcctgggcaacagagcaagaccccatctaaaaaaa-ata---cgtaacacatgtaattatgtacagtacatatttgacaataa---taagtggctgttacctgtttacgtgtttactacatcatgtgttttatcattatggtagagtatatttctacttataaaaacagtattaactgtgaaacagcctcaggtacctccttcaggagctcctccagaaggcattgctatcacaggagatgaccgcttcatgtgtgtttggcccctgaagcccttccagtgggacaagatggagatggaagacagtgacattcatgatgctga-ccctgtgtaggcctaggttaacgtgtgtttgtgtattagttttaaaaactaaa----aataaacatagaggaaaact--tagagatataaagaaagaaaatattttt-tgcagctgtataatatacctgtgtttcaagctaagtgttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacgtcagccaac-----cttattactgaagaaagaacctttcttttttgacgacgtagtgtagcctctacatagtttttgtgaagtttgcagttgttacccaggccttcataggtgctcactactcactcactgactcacccagagtagcttccagtcctgcaagctctattcgtgtgaagtgaactacacaggtgtaccagtttttatattttataccacaattttaccgtcccttttctatgtttgggtacacagatactattgtgttcccgttgca i rheMac8.chr5 I 5 C 0 s macFas5.chr5 187903361 1219 + 189454096 ttaacaggagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctgttgcctggtgatgctgtggccagaataaagtcatagtgtggcacattactcacgtgtttgtggtgatgcttatgtaaacaaatcgtgctgccggtcatataaacgcatagcacaggctgggcgtggttgctcactcctgtaatcccagcactttgggaagccaaggttagtggattacctgagttcaggagtttgagactagcctggccaacatagtggaaccccgcctctactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgttatcccagctactctggaggctgcggcaggagaatggcttgaacctgggatgtggagcttgtggtgagctgagatcacaccattgctctccagcctgggcaacagagcaagaccccatctaaaaaaa-ata---tgtaacacatgtaattatgtacagtacatatttgacaataa---taagtggctgttacctgtttacgtgtttactacatcatgtgttttatcattatggtagagtatatttctacttataaaaacagtattaactgtgaaacagcctcaggtacctccttcaggagctcctccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttccagtgggacaagatggagatgaaagacagtgacattcatgatgctga-ccctgtgtaggcctaggttaacgtgtgtttgtgtattagttttaaaaactaaa----aataaacatagaggaaaact--tagagatataaagaaagaaaatagttttgtgcagctgtataatatacctgtgtttcaagctaagtgttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacgtcagccaac-----cttattactgaagaaagaacctttcttttttgacgacgtagtgtagcctctacatagttttcgtgaagtttgcagttgttacccaggccttcataggtgctcactactcactcactgactcacccagagtagcttccagtcctgcaagctctattcgtgtgaagtgaactacacaggtgtaccagtttttatattttataccacaattttaccgtcccttttctatgtttgtgtacacagatactattgtgttcccattgca i macFas5.chr5 I 5 C 0 s macNem1.NW_012013133v1 24285729 1217 - 25927173 ttaacaggagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcata--gtggcacattactcacgtgtttgtggtgatgctcgtgtaaacaaatcgtgctgccagtcatataaaagcatagcacaggctgggcgtggttgctcactcctgtaatcccagcactttgggaagccaaggttagtggatcacctgagttcaggagttcgagactagcctggccaacatagtggaaccctgcctctactaaaaatacaaaaattaaccaggcatggtggcgggcgcctgtaatcccggctaccctggaggctgcggcaggagaatggcttgaa-ctgggaggtggagcttgcagtgagctgagatcacaccattgcactccagcctgggcaacagagcaagaccccatctaaaaagatata---tataacacatgtaattatgtacagtacatatttgacaataa---taagtggctgttacctgtttacgtgtttactacatcatatgttttatcattatggtagagtgtatttctacttataaaaacagtattaactgtgaaacagcctcaggtacctccttcaggagctcctccagaaggcattgctatcacaggagatgacagcttcatgtgtgtttggcccctgaagcccttccagtgggacaagatggagatgaaagacagtgacattcatgttgctga-ccctgtgtaagcctaggttaacgtgtgtttgtgtattagttttaaaaactaaa----aataaacatagaggaaaact--tagagatataaagaaagaaaatatttttgtgcagctgtataatatacctgtgtttcaagctaagtgttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacgtcagccaac-----cttattactgaagaaagaacctttcttttttgacgacgtagtgtagcctctacatagttttcgtgaagtttgcagttgttacccaggccttcataggtgctcactactcactcactgactcacccagagtagcttccagtcctgccagctctattcgtgtgaagtgaactacacaggtgtaccagtttttatattttataccacaattttaccgtccctttcctatgtttgggtacacagatactattgtgttcccgttgca i macNem1.NW_012013133v1 I 245 C 0 s cerAty1.NW_012001672v1 3320164 1217 + 4669795 ttaacaggagaccacatagacaatggtggtaccatgacatgagattctagtggatctggaaaattcctattgcctggtgatgctgtggccagaataaagtcata--gtggcatattactcacgtgtttgtggtgatgctcgtgtaaacaaatcgtgctgccagtcatataaacacatagcacaggctgggcgtggttgctcactcctgtaatcccagcactttgggaagccaaagttagtggatcacctgagttcaggagttcgagactagcctggccaacatagtggaaccctgcctctactaaaaatacaaaaattaaccaggcatggtggcgggcacctgtaatcccagctaccctggaggctgcggcaggagaatggcttgaa-ctgggaggtggagcttgcagtgagctgagatcacaccattgcactccagcctgggcaacagagcaagaccccatctaaaaagataca---tataacacatgtaattatgtacagtacatatttgacaataa---taagtggctgttacctgtttacgtgtttactacatcatatgttttatcattatggtagagtgtatttctacttataagaacagtattaactgtgaaacagcctcaggtacctccttcaggagctcctccagaaggcattgttatcacaggagatgacaactgcatgtgtgtttggcccctgaagcccttccagtgggacaagatggagatggaagacagtgatattcatgatgctga-ccctgtgtaggcctaggctaacatgtgtttgtgtattagttttaaaaactaaaaattaataaacatagaggaaaact--tagagatataaagaaagaaaatatttttgtgcagctgtgtaatatgcctgtgtttcaagc----tgttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacgtcagccaac-----cttattactgaagaaagagcctttcttttttgacgacgtagtatagcctctacatagttttcgtgaagtttgcagttgttacccaggccttcataggtgctcactactcactcactgactcacccagagtagcttccagtcctgccagctctattcgtgtgaagtgaactacacaggtgtaccagtttttatattttataccacaattttactgtcccttttctgtgtttgggtacacagatactattgtgttcccgttgca i cerAty1.NW_012001672v1 I 5 C 0 s chlSab2.chr7 134279684 1223 + 135778131 ttaacaggagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcatagtgtggcacattactcatgtgtttgtggtgatgctcatgtaaacaaatcgtgctgccggtcacataaaagcatagcacaggctgggcgtggttgctcactcctgtaatcccagcacttcgggaagccaaggttagtggattacctgagttcaggagttggagactagcctggccaacatagtggaaccccacctctactaaaaatacaaaaattagccaggcgtggtggtgggcgcctgttatcccagctactctggaggctgcggcaggagaatggcttgaacctgggatgtggagcttgcagtgagctgagatcacaccattgctctccagcctgggcaacagagcaagaccccatctaaaaaaa-ata---tgtaacacatgtaattatgtatcgtacgtatttgacaataa---taagtggctattacctgtttatgtgtttactacatcatatgttttatccttatggtagagtgtatttctacttataaaaatagtattaactgtgaaacagcctcaggtacctccttcaggcgctcctccagaaggcattgctgtcacaggaaatgacagcttcatgcgtgattggcccctgaagcccttccagtgggacaagagggagatggaaaacagtgacattcatgatgctga-ccctgtgtaggcctaggctaacgtgtgtttgtgtattagttttaaaaactaaaaattaataagcatagaggaaaact--tagagatatgaagaaagaaaatatttttgtgcagctgtataaaacgcctgtgtttcaagctaagtgttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacatcagccaac-----tttattactgaagaaagagcctttcttttttgatgacgtagtgtagcctctacatagttttcgtgaagtttgcagttgttacccaggccttcataggtgctcactactcactgactgactcccccagagcagcttccagtcctgcaagctctattcatgtgaagtgaactacacaggtgtaccagtttttatattttatacgagaattttaccatcccttttctatgtttgggtacatagatactattgtgttcccgttgca i chlSab2.chr7 I 5 C 0 s manLeu1.NW_012102221v1 2716609 1214 - 2847728 ttaacaggagaccacatagacaatggtggtaccatgacatgagattctagtggagctggaaaattcctattgcctggtgatgctgtggccagaataaagtcata--gtggcacattactcacgtgtttgtggtgatgctcgtgtaaacaaatcgtgctgccggtcatataaaagcatagcacaggctgggcgtggttgctcactcctgtaatcccagcactttgggaagccaaggttagtggatcacctgagttcaggagttcgagactagcctggccaacatagtggaaccctgcctctactaaaaatacaaaaattaaccaggcatggtggcgggcgcctgtaatcccagctaccctggaggctgcggcaggagaatggcttgaa-ctgggaggtggagcttgcagtgagctgagatcacaccattgcactccagcctgggcaacagagcaagaccccatctaaaaagataca---tatgacacatgtaattatgtacagtacatatttgacaataa---gaagtggctgttacctgtttacgtgtttactacatcatatgttttatcattatggtagagtgtatttctacttataagaacagtattaactgtggaacagcctcaggtgcctccttcaggagctcctccagaagccattgctatcacaggagatgacagctgcatgcgtgtttggcccctgaagcccttccagtgggacaagatggagatggaagacagtgatattcatgatgctga-ccctgtgtaggcctaggctaacatgtgtttgtgtattagttttaaaaactaaaaattaataaacatagaggaaaact--tagagatataaagaaagaaaatatttttgtgcagctgtataatatgcctgtgtttcaa-------gttatta-----------------taaagcagtcaaaaggttaaaattagaagtttatgaagtgaaaatgttacgtcagccaac-----cttattactgaagaaagagcctttcttttttgacgacgtagtgtagcctctacatagttttcgtgaagtttgcagttgttacccaggccttcataggtgctcactactcgctcactgactcacccagagtagcttccagtcctgcaagctctattcgtgtgaagtgaactacacaggtgtaccagtttttgtattttgtaccacaattttaccgtcccttttctatgtttgggtacacaaatactattgtgttcccgttgca i manLeu1.NW_012102221v1 I 5 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 837525 8832 + 2368649 M e otoGar3.GL873580 11203743 5920 - 11315646 I a score=3788046.000000 s hg38.chr4_KI270789v1_alt 74342 696 + 205944 tgcagtattcagcacagtaacctcctgtacaagtttgcagcctagaacaataggctctactgtctagtccaggtgtgtaggaggctgtgccaactagatgtgtgtaaatgc----------actctagaatgttcacacaaaggcaaaattgcctaacaacgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAAagagagac--atagagagagagagagCGTGCACACACAAGAATGACAGGGAGAGagagatttattataggattattatgggaattggctcccataattctaaagactgagaagtcccatgatctgctgaagaactaggaaagccgatggtataattaggtctgagtccaaaggcccacaaattaggaccaccacactagctggctgtggtgtcagtatctgtcatcccaccgatttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacatagagagaccccagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctccagggcaggagaagatggatgtcctaggtcaaacagagagaaaattctccctttctctgtgtttttgctctatttgggccctcagtggattggatggga-gtgcccagctgcttagtgaaggtgatttcctttactcggt s panTro5.chr4 192866035 698 + 194502333 tgcagtattcagcacagtaacctcctgtacaagtttgcagcctagaacaataggctctactgtctagtccaggtgtgtaggaggctgtgccaactagatgtgtgtaaatgc----------actctagaatgttcacacaaaggcaaaattgcctaacaacgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAAagagagacagagagagagagagagagCGTGCACACACAAGAATGACAGGGAGAGagagatttattataggattattatgggaattggctcccataattctaaagactgagaagtcccatgatgtgctgaagaactaggaaagccggtggtataattaggtctgagtccaaaggcccacaaattaggaccaccacactagctggctgtggtgtcagtatctgtcatcccaccgatttggggggctgaagtgggaggatcacttgaaccaggagttggagaccagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctccagggcaggagaagatggatgtcctaggtcaaacagagagaaaattctccctttctctgtgtttttgctctatttgggccctcagtggattggatggga-gtgcccagctgcttagtgaaggtgatttcctttactcggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192749790 698 + 195804263 tgcagtattcagcacagtaacctcctgtacaagtttgcagcctagaacaataggctctactgtctagtccaggtgtgtaggaggctgtgccaactagatgtgtgtaaatgc----------actctagaatgttcacacaaaggcaaaattgcctaacaacgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAAagagagacagagagagagagagagagCGTGCACACACAAGAATGACAGGGAGAGagagatttattataggattattatgggaattggctcccataattctaaagactgagaagtcccatgatgtgctgaagaactaggaaagccggtggtataattaggtctgagtccaaaggcccacaaattaggaccaccacactagctggctgtggtgtcggtatctgtcatcccaccgatttggggggctgaagtgggaggatcacttgaaccaggagttggagaccagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctccagggcaggagaagatggatgtcctaggtcaaacagagagaaaattctccctttctctgtgtttttgctctatttgggccctcagtggattggatggga-gtgcccagctgcttagtgaaggtgatttcctttactcggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3786252 682 + 4876863 tgcagtattcagcacagtaacctcctgtacaagtttgcagcgtagaacaataggctctactgtctagtccaggtgtgtaggaggctgtgccaactagatgtgtgtaaatgc----------actgtagaatgttcacacaaaggcaaaattgcctaacaatgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAAagagagac--atagagagagagcgagCGTGCACACACAAGAATGACAGGGAGagagagatttattataggattattatgggaattggctcccataattctaaagactgagaagtcccatgatc--------------aaaagccggtggtataattaggtctgagtccaaaggcccacaaattaggaccaccacactagctggctgtggtgtcagtatctgtcatcccaccgatttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcagcatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctccagggcaggagaagatggatgtcctaggtcaaacagagagaaaattctccctttctctgtgtttttgctctatttgggccctcagtggattggatggga-gtgcccagctgcttagtgaaggtgatttcctttactcggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112671881 693 + 115148730 tgcagtattcagcacagtagcctgctgtacaagtttgcagcctagaacaataggctatactgtctagtccaggtgtgtaggaggctgtgccagctagatgtgtgtaaatgc----------actctagaatgttcacacaaaggcaaaatcgcctaacaacgcattcctcagaatgtatccccccttgttaagtgacacgtgactcca--tatatatacaAagagagac----atagagagagagagCGTGCACACACAAGAATGACAGGGAGAGagagattcattataggattattatgggaatttgctcccataattctaaagactgagaagtcccatgatctgctgaagaactaggaaagccggtggtataattaggtctgagtccaaaggcccacaaattaggACCACCACACTAGCTGGCTGTGGTGTTGGTATctgtaatcccacctatttggggggctgaagtgggaggatcacttgagccaggagtttgagactagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaaTcaggagcaccagtgctccagggcaggagaagatggatgtcctaggtcaaacagagagaaaattctccctttctctgtgtttttgctctatttgggccctcaggggattgggtgggatgcgcccagctgcttagtgaaggtgatttcctttactcggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957111 679 + 190429646 tgcagtgttcagcacagcaacctgctgtgcaagtttgcagcctagaacaataggctatactgtatagtccaggtgtgtaggaggctgtgccagctggatgtgtgtaagtgc----------actctagaatgttcacacaaaggcaaaattgcttaacgtcgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAGAGAGAGAG------------------GGAGCACAC--GTGAATGACAGGGAGagagagatttattataggattattatgggaattggctcccataattctaaagactgagaggtcccatgatctgcagaagaactaggaaagccggtgatataatttggtctgagtccaaaggcccacaaattaggacgaccacactagctgggtgtggtgttggtgtctgtaatcccacctgtttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagagggatgtcccagctcaaacagagagaaaattctccctttctctgtctttttgctctatttgggccctcagtggattggatgggatgcgcccagctgcttagtgatggtgattttctctagttggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187904580 692 + 189454096 tgcagtgttcagcacagcaacctgctgtacaagtttgcagcctagaacaataggctatactgtatagtccaggtgtgtaggaggctgtgctagctggatgtgcgtaagtgcactctagaatactctagaatgttcacacaaaggcaaaattgcttaacgtcgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATTTACAGAGAGAGAG------------------AGAGCGCACACGTGAATGACAGGGAGAGagagatttattataggattattatgggaattggctcccataattctaaagactgagaggtcccatgatctgcagaagaactaggaaagccggtgatataatttggtctgagtccaaaggcccacaaattaggACGACCACACTAgctgggtgtggtgttggtgtctgtaatcccacctgtttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacatagagagaccctagctctaaaacagaaaaaaagaaaatcaggagcaccagtgctctagggcagaagaagagggatgtcccagctcaaacagagagaaaattctccctttctctgtctttttgctctatttgggccctcagtggattggatgggatgcgcccagctgcttagtgatggtgattttctctagttggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24286946 681 - 25927173 tgcagtgttcagcacagcaacctgctgtgcaagtttgcagcctagaacaataggctatactgtatagtccaggtgtgtaggaggctgcgccagctggatgtgtgtcagtgc----------actctagaatgttcacacaaaggcaaaattgcttaacgtcgcatttctcagaatgtatccccccttgttaagtgacacgtgactCCATGTATATATACAGAGAGAGAG------------------AGAGCACACATAAGAATGACAGGGAGagagagatttattataggattattatgggaattggctcccataattctaaagactgagaggtcccatgatctgcagaagaactaggaaagccggtgatataatttggtctgagtccaaaggcccacaaattaggacgaccacactagctgggtatggtgttggtgtctgtaatcctacctgtttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagagggatgtcccagctcaaacagagagaaaattctccctttctctgtctttttgctctatttgggccctcagtggattggatgggatgcgcccagctgcttagtgatggtgattttctctagttggt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3321381 681 + 4669795 tgcagtgttcagcacagcaacctgctgtacaagtttgcagcctagaacaataggctatactggatagtccaggtgtgtaggaggctgtgctagctggatgtgtgtaagtgc----------gctctagaatgttcacacaaaggcaaaattgcttaacgtcgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAGAGAGAGAG------------------AGAGCACACATAAGAATGACAGGGAGagagagatttattataggattattatgggacttggctcccataattctaaagactgagaggttccatgatctgcagaagaactaggaaagccggtgatacaattcggtctgagtccaaaggcccacaaattaggacgaccacactagctgggtgtggtgttggtgtctgtaatcccacctgtttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagagggatgtcccagctcaaacagagagaaaattctccctttctctgtctttttgctctatttgggccctcagtggattggatgggatgcgtccagctgcttagtgatggtgattttctctactcggt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134280907 677 + 135778131 tgcagtattcagcacagcaacctgctgtgcaagtttgcagcctagaacaataggctatactacatagtccaggtgtgtaggaggctgtgccagctggatgtgtgtaattgc----------actctagaatgttcacacaaaggcaaaattgcctaacgacgcatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAGAGAGAGAC------------------AGCGCACACATAAGAATGACAGGGAGAGagagatttattataggattattatgggacttggctcccataattctaaagactgagaggtcctatgatctgcagaagaactaggaaagccggtgatacaattcggtctgagtccaaaggcccacaaattaggACGACCACACTAgctgggtgtggtgttggtgtctgtaatcccacctatttgtggggctgaagtgggaggatcatttgagccaggagtttgagaccagcctgagcaacat----agaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagatggatgtcctagctcaaacagagagaaaattctccctttctctgtctttttgctctatttgggccctcagtggattggatgggatgcgcccagctgcttagtgacggtgattttctctacttggt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2717823 681 - 2847728 tgcagtgttcagcacagcaacctgctgtacaagtttgcagcctagaacaataggctgtactggatagtccaggtgtgtaggaggctgtgctagctggatgtgtgtaagtgc----------actctagaatgttcacacaaaggcaaaattgcttaacgtcacatttctcagaatgtatccccccttgttaagtgacacatgactCCATGTATATATACAGAGAGAGAG------------------AGAGCACACATAAGAATGACAGGGAGagagagatttattataggattattatgggacttggctcccataattctaaagactgagaggtcccatgatctgcagaagaactaggaaagccagtgatataatttggtctgagtccaaaggcccacaaattaggacaaccacactagctgggtgtggtgttggtgtctgtaatcccacctgtttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcttgagcaacatagagagaccctagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagagggatgtcccagctcaaacagagagaaaattctccctttctccgtctttttgctctatttgggccctcagtggattggatgggatgcgcccagctgcttagtgatggtgattttctctactcggt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 846460 672 + 2368649 tgcagtattcagcacggcaacctgctgtacaagtttgcagcctaggacaataggctgtactgtacagcccaggtgtgcaggaggccgtgccagctggatgtgtgtaagtgc----------gctctagaaggttcacacaaaggcaaaattgcctaacaacgcatttctcagaatggatcccccc---ttaagtgacacatgactCCATGTATATATACAGAGAGAGA--------------------GCGCACACATAAGAATGACAGGGGgagagagatttattgtgggatttttatgggacttggctcccacaattctaaagactgagaggtcccatgatctgcagaagaactaggaaagccggtgatataatttggtctgagtccaaaggcccacaaattaggTCGACCACACTAgctgggtgtggtgttggtgtctgtaatgccacctatttggggggctgaagtgggaggatcacttgagccaggagtttgagaccagcctgagcaacat----agaccccagctctaaaacag-aaaaaagaaaatcaggagcaccagtgctctagggcagaagaagatggatgtcctagctcaaacagagagaaaattctccctttctctgtcttttggctctatttgggccctcagtggattggatgggatgcgcccagcggctcagtggcggtgattttctctacgcggt i colAng1.NW_012116221v1 M 8832 I 75 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=18629.000000 s hg38.chr4_KI270789v1_alt 75038 5 + 205944 atact s panTro5.chr4 192866733 5 + 194502333 ctact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750488 5 + 195804263 ctact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3786934 5 + 4876863 atact i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672574 5 + 115148730 ctact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957790 5 + 190429646 ctacc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905272 5 + 189454096 ctacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287627 5 - 25927173 ctacc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322062 5 + 4669795 ctacc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281584 5 + 135778131 ctacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718504 5 - 2847728 ctacc i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e colAng1.NW_012116221v1 847132 75 + 2368649 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=616230.000000 s hg38.chr4_KI270789v1_alt 75043 114 + 205944 aagtcaaatgctaatcttttctgggaacacattcacagacacacgcaaaaagtatgatttcccagttttctaggcatcctttagcccagttaagtgggcacgtaaagctaaaca s panTro5.chr4 192866738 114 + 194502333 aagtcaaatgctaatcttttgtgggaacacattcacagacacacgcaaaaagtatgatttcccagttttctaggcatcctttagcccagtcaagtgggcacgtaaagctaaaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750493 114 + 195804263 aagtcaaatgctaatcttttgtgggaacacattcacagacacacgcaaaaagtatgatttcccagttttctaggcatcctttagcccagtcaagtgggcacgtaaagctaaaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3786939 114 + 4876863 aagtcaaatgctagtcttttctgggaacacattcacagacacacgcaaaaagtatgatttcccagttatctaggcatcctttagcccagtcaagtgggcacgtaaagctaaaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672579 112 + 115148730 aagtcaaatgctaatcttttctaggaacacattcacag--acacgcagaaagtatgatttaccagttatctaggcatcctttagcccagtcaagtggacacagaaagctgaaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957795 114 + 190429646 aagtcaaaagctcatcttttctgggaacacactcacagacacacacaaaaattataatttaccggttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905277 114 + 189454096 aagtcaaaagctcatcttttctgggaacacactcacagacacacacaaaaattatgatttaccggttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287632 114 - 25927173 aagtcaaaagctcatcttttctgggaacacactcacagacacacacaaaaattatgatttaccggttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322067 114 + 4669795 aagtcaaaagctcatcttttctgggaacacactcacagacacacacaaaaattatgatttaccggttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281589 112 + 135778131 aactcaaaagctcatcttttctgggaacgcactcacag--acacacaaaaattatgatttatcagttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718509 114 - 2847728 aagtcaaaagctcatcttttctgggaacacactcacagacacacacaaaaattatgatttgccggttatctaggcatcctttagcccagtcaagtggacacataaagctaaaca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847207 114 + 2368649 aagtcaaaggctcatcttttctgggaacacactcacagtcacacacaaaaattatgatttaccggttatctaggcatcctgtagcccagtcaagtggacacataaagctaaaca i colAng1.NW_012116221v1 I 75 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1413961 3425 - 2520184 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=12007.000000 s hg38.chr4_KI270789v1_alt 75157 2 + 205944 tc s panTro5.chr4 192866852 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750607 2 + 195804263 tc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787053 2 + 4876863 tc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672691 2 + 115148730 tc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957909 2 + 190429646 tc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905391 2 + 189454096 tc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287746 2 - 25927173 tc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322181 2 + 4669795 tc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281701 2 + 135778131 tc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718623 2 - 2847728 tc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847321 2 + 2368649 tc i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1417386 2 - 2520184 TT i dasNov3.JH570353 I 3425 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16908495 3034 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=176899.000000 s hg38.chr4_KI270789v1_alt 75159 30 + 205944 ataTACATGT-ATGTATGAATATATACATGT----- s panTro5.chr4 192866854 30 + 194502333 ataTACATGT-ATGTATGAATATATACATGT----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750609 30 + 195804263 ataTACATGT-ATGTATGAATATATACATGT----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787055 30 + 4876863 ataTACATGT-ATGTATGAATATATACATGT----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672693 30 + 115148730 ataTACATGT-ATGTATGAATATATACATGT----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957911 30 + 190429646 aTGTACATGT-ATGTCTGAATATATATATGT----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905393 30 + 189454096 aTGTACATGT-ATGTCTGAATATATATATGT----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287748 30 - 25927173 aTGTACATGT-ATGTTTGAATATATATATGT----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322183 30 + 4669795 aTGTACATGT-ATGTCTGAATATATATATGT----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281703 30 + 135778131 aTGTACATGT-ATGTCTGAATATATATATGT----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718625 30 - 2847728 aTGTACATGT-ATGTCTGAATATATATATGT----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847323 30 + 2368649 aTGTCCATGT-ATGTATGAATATATACATGT----- i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16911529 30 - 59632846 ATGAATATAG-ACAGATGAACATACACATAT----- i canFam3.chr16 I 3034 C 0 s dasNov3.JH570353 1417388 36 - 2520184 ATATTTATGTAACATCTGTGTGCATACTTGCTGTGT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I e otoGar3.GL873580 11203743 5920 - 11315646 I a score=1055309.000000 s hg38.chr4_KI270789v1_alt 75189 152 + 205944 TCCT----TACCCTGGATTTCTCTTT---------CCCTGTCACTCTTATAA-------TTTGTGTATTTATTTGGGGAAA----GAATAGTTA-TCAAGAATT-TCTAGAGGAAGCCAACTGTCTACATAA--GCTTCAGAGTTACAACGCCTAACTCTATCCAATCTAAGTTAAATTT s panTro5.chr4 192866884 152 + 194502333 TCCT----TACCCTGGATTTCTCTTT---------CCCTGTCACTCTTATAA-------TTTGTGTATTTATTTGGGGAAA----GAATAGTTA-TCAAGAATT-TCTAGAGGAAGCCAACTGTCTACATAA--GCTTCAGAGTTACAACGCCTAACTCTATCCAATCTAAGTTAAATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750639 152 + 195804263 TCCT----TACCCTGGATTTCTCTTT---------CCCTGTCACTCTTATAA-------TTTGTGTATTTATTTGGGGAAA----GAATAGTTA-TCAAGAATT-TCTAGAGGAAGCCAACTGTCTACATAA--GCTTCAGAGTTACAACGCCTAACTCTATCCAATCTAAGTTAAATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787085 152 + 4876863 TCCT----TACCCTGCATTTCTCTTT---------CCCTGTCACTCTTATAA-------TTTGTGTATTTATTTGGGGAAA----GAATAGTTA-TCAAGAGTT-TCTAGAGGAAGCCAACTGTCTACATAA--GCTTCAGAGTTACAATGCCTAACTCTATCCAATCTAAGTTAAATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672723 151 + 115148730 TCCT----TACCCTGGATTTCTCTTT---------CCCTGTCACTCTTATAA-------TTTGTGTATTTATTTGGGGAAA----GAATAGTTA-TCAAGA-CT-TCTAGAGGAAGCCAACTGTTTACATAA--GCTTCTGAGTTACAAAGCCTAACTCTATCCAATCTAAGTTAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188957941 153 + 190429646 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCATAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905423 153 + 189454096 TCCT----CACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTTAACTGTCTTCATAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287778 153 - 25927173 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCATAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322213 153 + 4669795 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCATAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281733 153 + 135778131 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCGTAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718655 153 - 2847728 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTATAA-------TTTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCATAA--GCTTCTGAGTTACAATGCCTGACTCTATCCAATCTAAGTTAAATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847353 153 + 2368649 TCCT----TACCCTGGATTTCTCTTT---------CCTTATCACTCTTACAA-------TCTGTGTGTTTATTTGGGGAAA----GAATAGTTA-TCAAGACTTCTCTAGAGGAAGTCAACTGTCTTCATAA--GCTTCTGAGTTACAACGCCTGACTCTATCCAATCTAAGTTAAATTT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11209663 172 - 11315646 TTCT----GGCCCACCATTTTTCTTTGCACCCCCCCCCCGGCATACTTACAATTATTTGTTTGTGTGTTTATTTTGGAAAAAGATAGATAGTTA-TCAAGACCAATCTGGTGGAAGGCAAGTGTCTGCATGG--GCTTCTGAGTCATAAAACCTGACTCTATCCAA-CCAGGTTAAATTT i otoGar3.GL873580 I 5920 C 0 s canFam3.chr16 16911559 157 - 59632846 ---------ACCCCCGTTTTCTCTTA---------CCCTAGGAC-CTTTTAACTACCTGTTTGTGTATTTCTTTGGGAAGA----AGATAGTGAGGCAAGACTCCCCTAAAGGAAAGCAACAGTCAATATGGGTGCTCCTGACTCATCAACCAAGACTCTATCCAATACAAATTAAACCT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1417424 156 - 2520184 TCATATACTACCCTGAGTTTCCCTTA---------ACATAGCACTCTTGTAATTACGTGCTTATGTATTTTTCC-----------AGATAGTCA-GCAAGATTCCTCCTGAGGAAGGCAGCC-TCTGCCCAG--AATCCTGAGTTGCAGAGCCTGACCCCGTCCAATCCAGGTTAGACTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189587875 3664 - 190850796 I e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=6711.000000 s hg38.chr4_KI270789v1_alt 75341 2 + 205944 -AA s panTro5.chr4 192867036 2 + 194502333 -AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750791 2 + 195804263 -AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787237 2 + 4876863 -AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672874 2 + 115148730 -AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958094 2 + 190429646 -AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905576 2 + 189454096 -AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287931 2 - 25927173 -AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322366 2 + 4669795 -AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281886 2 + 135778131 -AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718808 2 - 2847728 -AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847506 2 + 2368649 -AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189591539 2 - 190850796 -aa i calJac3.chr3 I 3664 C 0 s otoGar3.GL873580 11209835 2 - 11315646 -AA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16911717 1 - 59632846 -A- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1417580 2 - 2520184 TA- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 964334 3545 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=2842962.000000 s hg38.chr4_KI270789v1_alt 75343 343 + 205944 GAATGAATGTTGAGTACATCTGGTTTGTATATGGTGTTTTGGCAGAGCT---CA---AT---TTAATTCATCTCAAAAAGCATCCAGTGAGCACATACCAAATAATGGCCTCATTTCAGGCTTTGGGCTGTATAAATaacatacatcccaatgtggggaaaccagacaataaacac-------aataatttac-------agag-aatt-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacatcgtttgggattgcaattttaaacagagtCAAAACTTGA-AATA--ATTTTAGTATGTTGCAAATATATCTAAAATAC--GT-AGGACGTCTTGC-ATGGTCACG s panTro5.chr4 192867038 343 + 194502333 GAATGAATGTTGAGTACATCTGGTTTGTATATGGTGTTTTGGCAGAGCT---CA---AT---TTAATTCATCTCAAAAAGCATCTAGTGAGCACATACCAAATAATGGCCTCATTTCAGGCTTTGGGCTGTATAAATaacgtacatcccaatgtggggaaaccagacaataaacac-------aataatttac-------agag-aact-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtagggaggag-aggaactacatcgtttgggattgcaattttaaacagagtCAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAC--AT-AGGACGTCTTGC-ATGGTCACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192750793 343 + 195804263 GAATGAATGTTGAGTACATCTGGTTTGTATATGGTGTTTTGGCAGAGCT---CA---AT---TTAATTCATCTCAAAAAGCATCTAGTGAGCACATACCAAATAATGGCCTCATTTCAGGCTTTGGGCTGTATAAATaacgtacatcccaatgtggggaaaccagacaataaacac-------aataatttac-------agag-aact-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtagggaggag-aggaactacatcgtttgggattgcaattttaaacagagtCAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAC--AT-AGGACGTCTTGC-ATGGTCACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787239 343 + 4876863 GAATGAATGTTGAGTACATCTGGTTTGTATATGGTGTTTTGGCAGAGCT---CA---AT---TTAATTCATCTCAAAAAGCATCTAGTGAGCACATACCAAATAATGGCCTCATTTCAGGCTTTGGGCTGTATAAATaacatacatcccaatgtggggaaaccagacaataaacac-------aataatttac-------agag-aatt-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacatcgtttgggattgcaattttaaacagagtCAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAC--GT-AGGACATCTTGC-ATGGTCACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112672876 337 + 115148730 GAATGAATGTTGAGTACATCTGGTTTGTATATGGTGTTGTCGCAGAGCT---CA---AT---TTAATGCATTTCAAAAAGCATCTAGTGAGCACATACCAAATAATGGCCTCATTTCAGGCTTTGGGCTGTATAAATAAC--acatcccaatgtggggaaaccagacaataa--ac-------aataatttac-------agat-aatt-taaaggaagatgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacatcgtttgggatcgcaattttaaac--agTCAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAT--GT-AGGAAATCTTGT-ATGGTCACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958096 344 + 190429646 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTGTTCTGGCAGAGCT---CA---AT---TTAATTCATCTCTAAAAGCATCCAGTGAGCACATACCAAATAATGGCCGCATTTCAGGCTTTGGGTTGTATAAATAACACACATCCCAATGTGAGGAAACCAGACAATAAACAC-------AATAGTTTAC-------AGAG-AATT-TAAAGGAGGGTGAGTGTCATGAGAAGAAAATAGTAAAAGGTAAGGAAGAG-AGGAACTACATCGTTTGGGATCGCAATTTTAATTAGAGTAAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AGGAAATCTTGTAACGGTCACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905578 344 + 189454096 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTGTTCTGGCAGAGCT---CA---AT---TTAATTCATCTCTAAAAGCATCCAGTGAGCACATACCAAATAATGGCCGCATTTCAGGCTTTGGGCTGTATAAATAACATACATCCCAATGTGAGGAAACCAGACAATAAACAC-------AATAGTTTAC-------AGAG-AATT-TAAAGGAGGGTGAGTGTCATGAGAAGAAAATAGTAAAAGGTAAGGAGGAG-AGGAACTACATCATTTGGGATCGCAATTTTAATTAGAGTAAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AGAAAATCTTGTAACAGTCACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24287933 320 - 25927173 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTGTTCTGGCAGAGCT---CA---AT---TTAATTCATCTCTAAAAGCATCCAATGAGCACATACCAAATAATGGCCGCATTTCAGGCTTTGGGCTGTATAAATaacatacatcccaatgtgaggaaaccagacaataaacac-------aatagtttac-------agag-aatt-taaaggagggtgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacatcgtttgggatcgcaattttaa---------------------------ttagaatgTTGCAAATATATCTAAAATAA--GT-AGGAAATCTTGTAACGGTCACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322368 344 + 4669795 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTGTTCTGGCAGAGCT---CA---AT---TTAATTCATCTCTAGAAGCATCCAGTGAGCACATACCAAATAATGGCTGCATTTCAGGCTTTGGGCTGTATAAATAAGAtacatcccaatgtgagaaaaccagacaataaacac-------aatagtttac-------agag-aatt-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacattgtttgggatcgcaattttaaatagagtAAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AGGAAATCTTGTTATGGTCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134281888 345 + 135778131 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTATTCTGGCAGAGCT---CA---TT---TTAATTCATCTCTAAAAGCATCCAGTGAGCACATACCAAAGAATGGCCGCATTTCAGGCTTTGGACTGTATAAATaacatacatcccaaagtaaggaaaccagacaataaacac-------aatagtttac-------agag-aatt-taaaggaggatgagtgtcgtgagaagaaaatagtaaaaggtaaggaggagaaggaactacatcttttgggatcgcaattttaaatagagtCAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AGGAAATCTTGTTACGGTCACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2718810 344 - 2847728 GAATGAATTTTGAGTACATCTGGTTTGTATATGGTGTTCTGGCAGAGCT---CA---AT---TTAATTCATCTCTAGAAGCATCCAGTGAGCACATACCAAATAATGGCTGCATTTCAGGCTTTGGGCTGTATAAATaacgtacatcccaatgtgaggaaaccagacaataaacac-------aatagtttac-------agag-aatt-taaaggaggatgagtgtcatgagaagaaaatagtaaaaggtaaggaggag-aggaactacattgtttgggatcgcaattttaaatagagtAAAAACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AGGAAATCTTGTAATGGTCACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847508 325 + 2368649 GAATGAATTTTGAGTACATCTGGTTTGCATATGGTGGTCTGTCAGGGCT---CA---AT---TTAATTCATCTCTAAAAGCGTCCAGTGAGCACATAGCAAATAATGGC-------------------TGTATAAATAACATACATCCCAATGTGAGGAAACCAGACATTAAACAC-------AATAGTTTAC-------AGAG-AATT-TAAAGGAGGATGCGTGTCATGAGAAGAAAATGGTAAAAGGTAAGGAGGAG-AGGAACTACATCGTTTGGGATCGCAATTTTAAATAGAGTCAACACTTGA-AATA--ATTTTAGAATGTTGCAAATATATCTAAAATAA--GT-AAGAAATCTTGTTACGGTCACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189591541 333 - 190850796 gaaTGAA------------CTGGTTTGTATACGGTGTTTTGGCAATGCT---CA---AT---TTAATTCATCTCAAAAAGCATCTAGTCAGCACACACCAGCTCATGGCC-CATTTCAGGCTCTGGGCTGCATAAAT-ACATGCAT-CCAATGTGGG-AAACTAGACGACAAACGCAGTATCAAATAAATTTC-------AGAG-GATT-TAAAGGAGGATGAATGTCACGAGAAGAAAATAGTGAAAGGTGAGGAGGAG-AGGAACTACAACGTTTGGGATTGCAGTTTTACCTAGAGTCAAAACTTTA-AATA--ATTTCAGAATGTTGCAAATATGTCTAGAATAT--TT-AGAAAATC-TGT-GCAGTCATA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 967879 347 - 2196201 GAATGAACGTTGAATGCATCTGGTCTGTGTATGGTGTTTTGGCAGTGCT---CA---AT---TTAATTCATCTCAAAAAACATCTAGTGAGCACGTACAAGATCACGGCC-CATTTCAGGCTTGGGGCTGTGTAAATAACATGCAT-CCAACCTGGGAAAACTAGACAACAAACACAATATCAAATAAATTAC-------AGGG-AATG-TAAAGGAGGATGAGTGTCAAGAGAAGAAAACAGT-AAAAGTAAGGAGGAG-AGGAACTACATCGTTTGGGATTGCGATTTTAAATAGAGTCAAAACTTTA-AATA--ATTTTAGAATGTCGCAAATATGTCTAGAATAT--TT-AGAAAATCTTGT-GCAGTCAGA i cebCap1.NW_016107886v1 I 3545 C 0 s otoGar3.GL873580 11209837 346 - 11315646 GGGTGAATGTTGGCT--------TCTGTATATGATGTGTTGGCAGGGTTCAGCA---AT---TTGattcattttca-aagcatttattaagcacataccacataatggcc-tgttttaggtcttgggacatgtaagtaatatacatttcagtgtggggaaaacagatagttagcct-------aatataaaacacaggatagag-aatt-ttaatgatgtcggatgttatggtaagcatgcagtaaaaggtaagaagcat-aggaattgaagaatttgtgattgcaattttaaatatggcagATACTTAA-AACATTTTTTTAGAGTGTTGCCAGTATATTGAATACAT--TTAAGAAAATCTTGG-ACAGTCAAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16911718 336 - 59632846 GACTAAGTATTGAGTCGGCATGCTTTGTGTATGGTGTCCTAGCATAGTT---CAATGAT---GTAattcatc-cactaaatatttattaagcacctgtcatgggatggca-catttcagagtttgggatatataagtaacatatattgcaatgtggagaaatcacataataaacgcaatataaagtaaattat-------agag-aactgtaatggggtatgagtattactggaataatacagtaaaaggtaagaaagat-aggaattacag-atttaggatttcaatttcaaatagagtagtcaCTTAA-T-----ATTTTAAAGTGTTACAAATGT--------------T-ATTTAATCTTGG-ACAATAACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1417582 349 - 2520184 CAGCGAACACAGAAGCCACCTGTTTTGAATATGGTG--CCGGCAGAGTT---CA---ACAAatctattcattcc--aaaacgtttatggagtacccaccatgtgatg--tgcatgtcaggctttgggatacataaataacacacatttcaatatggggaaagcagacaacaagcacaaaaa--aataaattat-------agagaaatt-tagaagaaaaggagtgttatttgaacaaaatagaaaaagataaggatgaa-aggaattacagagtttgggattataattttaaatagaatggtcaTTTAAGAATG--TTTTTACAGTGTTGTAAATATACTCAACGCCATTTT-AGACACTCTTGG-ACAGTTAAA i dasNov3.JH570353 C 0 I 1 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13070152 1574 - 14256875 I a score=935589.000000 s hg38.chr4_KI270789v1_alt 75686 98 + 205944 TAAGTCTAGAATTCGAA--AAATAGCT---AGAGAATAAACTGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTATATTATAGCAAGGTAATT s panTro5.chr4 192867381 98 + 194502333 TAAGTCTAGAATTAGAA--AAATAGCT---AGAGAATAAACTGAAAATTCAAAATTAACATATTAGAAAAATTTTGGAACTTTTATATTATAGCAAGGTAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751136 98 + 195804263 TAAGTCTAGAATTAGAA--AAATAGCT---AGAGAATAAACTGAAAATTCAAAATTAACATATTAGAAAAATTTTGGAACTTTTATATTATAGCAAGGTAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787582 98 + 4876863 TAAGTCTAGAATTAGAA--AAATAGCT---AGAGAATAAACTGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTCTATATTATAGCAAGGTACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673213 98 + 115148730 TAAGTCAAGAATTAGAA--AAATAGCT---AGAGAATAAACTGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGATAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958440 98 + 190429646 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187905922 98 + 189454096 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288253 98 - 25927173 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322712 98 + 4669795 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTCTAAATTATAGCAAGGTAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282233 98 + 135778131 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719154 98 - 2847728 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAACGGAAAATTCAAAATTAATATATTAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847833 93 + 2368649 TAAATCCAGAATTAGAA--AAATAGCT---AGAGAATAAATGGAAAATTCAAAATTAA-----TAGAAAAATTTTGGAACTTTTAAATTATAGCAAGGTAATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189591874 100 - 190850796 TACCTCTAGAGCTAGAA--AAAGAGCTAC-AGAGAATAAACTGAAAACCTAAAATTCGTATATTAGAAAAATCTTGGAACTTTCAAATTATAGTAAGGGAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071726 100 - 14256875 taaaccTAGAGCTCGAA--AAACAGCTAC-AGAGTATAAACTGAAAACTTAAAATTCACATATTAGAAAAATGTGGAGACTTTTAAATTACAGCAAGGGAATG i saiBol1.JH378165 I 1574 C 0 s cebCap1.NW_016107886v1 968226 100 - 2196201 TACATCTAGAGCTAGAA--AAACAGCTAC-AGAGAATAAACTGAAAACTTAAAATTCATATATTAGAAAAATTTTGGGACTTTTAAATTATAGCAAGGGAATG i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11210183 101 - 11315646 TGCATCTAGAATTAGAAACAAATAGCTATAAAGAAAGAAAATGAAAATTCAAAATCAATGTTTTGGATAAATTTTGTAACTT--AAATTATAATAAGGTTATT i otoGar3.GL873580 C 0 I 1254 s canFam3.chr16 16912054 87 - 59632846 --TATCTGGAATT------AAATAGCT---ATAA---GAACAGAAAATCTAAAATTAACATACTTGGAATATTTTCAAACTTTTTAATTATAGCA--GTCACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1417932 91 - 2520184 CAACTCTATAATT-TAA--AAATAGAT---GTAAAGGAA----AAATTTCAAAATTAACAGGGGAGAAAA--TTGAAAACTTTTAAATTATAGCATGGGCAGT i dasNov3.JH570353 I 1 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=179522.000000 s hg38.chr4_KI270789v1_alt 75784 18 + 205944 AAAA-----TATTTTCATAAATG--- s panTro5.chr4 192867479 18 + 194502333 AAAA-----TATTTTCATAAATG--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751234 18 + 195804263 AAAA-----TATTTTCATAAATG--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787680 18 + 4876863 AAAA-----TATTTTCATAAATG--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673311 18 + 115148730 AAAA-----TATTTTCATAAATG--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958538 18 + 190429646 AACA-----TATTTTCATGAAGG--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906020 18 + 189454096 AAAA-----TATTTTCATAAAGG--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288351 18 - 25927173 AAAA-----TATTTTCATAAAGG--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322810 18 + 4669795 AAAA-----TATTTTCATAAAGG--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282331 18 + 135778131 AAAA-----TATTTTCATAAAGG--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719252 18 - 2847728 AAAA-----TATTTTCATAAAGG--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847926 18 + 2368649 AAAA-----TATTTTCATAAAGG--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189591974 18 - 190850796 AAAA-----TATTTTCATAAAGG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071826 18 - 14256875 AAAA-----TATTTTCATAACGG--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968326 18 - 2196201 AAAA-----TACTTTCATAAAGG--- i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16912141 23 - 59632846 AAAATACCTTATTTTCATAAAGA--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1418023 21 - 2520184 AAAA-----TATTTTCATAAAATCTC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e otoGar3.GL873580 11210284 1254 - 11315646 I a score=360448.000000 s hg38.chr4_KI270789v1_alt 75802 34 + 205944 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- s panTro5.chr4 192867497 34 + 194502333 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751252 34 + 195804263 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787698 34 + 4876863 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673329 34 + 115148730 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958556 34 + 190429646 TACCTTTATTTTGTTATCAGGAATTAGGCAATGG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906038 34 + 189454096 TACCTTTATTTTGTTATCAGGAATTAGGCAATGG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288369 34 - 25927173 TACCTTTATTTTGTTATCAGGAATTAGGCAATGG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322828 34 + 4669795 TAACTTTATTTTGTTATCGGGAATTAGGCAAAGG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282349 34 + 135778131 TAACTTTATTTTGTTGTCAGGAATTAGGCAAAGG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719270 34 - 2847728 TACCTTTATCTTGTTATCAGGAATTAGGCAAAGG- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 847944 34 + 2368649 TACCTTTATTTTGTTATCAGGAATTAGGCAAAGG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189591992 34 - 190850796 TAACTTTATTTTGTTATCAGGAATTAGGCAAAGT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071844 34 - 14256875 TACCTTTATTTTGTTATCAGGAACTAGGCAAAGG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968344 29 - 2196201 TACCTTTATTTTGTT-----GAATTAGGCAACGG- i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11211538 34 - 11315646 TACTGTTATTTTGTTTTTAAGAATTAAGCACAGG- i otoGar3.GL873580 I 1254 C 0 s canFam3.chr16 16912164 33 - 59632846 TTCCTTT-TTTTGTTTTCAAGGATTAGGCAAAAG- i canFam3.chr16 C 0 I 5827 s dasNov3.JH570353 1418044 34 - 2520184 CTCTTTTATTTTGTTTTCAATG-CTAGGCAAAAGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=493565.000000 s hg38.chr4_KI270789v1_alt 75836 52 + 205944 CTGTTGAAATATTCGCAAATACAACCCAGCTC--TAGAAATCAGGAAGTGGTGC s panTro5.chr4 192867531 52 + 194502333 CTGTGGAAATATTCGCAAATACAACCCAGCTC--TAGAAATGAGGAAGTGGTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751286 52 + 195804263 CTGTGGAAATATTCGCAAATACAACCCAGCTC--TAGAAATGAGGAAGTGGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787732 52 + 4876863 CTGTTGAAATATTCGCAAATACAGCCCAGCTC--TAGAAATGAGGAAGTGGTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673363 52 + 115148730 CTGTTGAAATATTCGCAAATACAACCCAGCTC--TAGAAATGAGGAAGTGGTGC i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 188958590 52 + 190429646 CTGCTGAAATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187906072 52 + 189454096 CTGCTGAAATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24288403 52 - 25927173 CTGCTGAAATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3322862 52 + 4669795 CTGCTGAGATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134282383 52 + 135778131 CTGCTGAAATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2719304 52 - 2847728 CTGCTGAGATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 847978 52 + 2368649 TTGCTGAAATATTCACAAATACGACCCAACTC--TAGAAATGAGGAAGTGGTGC i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189592026 52 - 190850796 CTACTGGAGTATTCACAAGTACAGCCCTACTC--TAGAAATAAGGAGGCGGTGC i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13071878 52 - 14256875 CTACTGAAGTATTCACAAATACAGCCCTACTC--TAGAAATGAGGAGGCAGTGC i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 968373 52 - 2196201 CTACTGAAATATTCACAAATACAGCCCTCCTC--TAGAAATGAGGAGGCGGCGC i cebCap1.NW_016107886v1 C 0 I 61 s otoGar3.GL873580 11211572 53 - 11315646 CTATT-CAATATTTAAAAATACAGCTGAGCTCTGTAGAAATGAGGAACCACTGC i otoGar3.GL873580 C 0 I 1 s dasNov3.JH570353 1418078 54 - 2520184 CTGTTTAAATATTCAAAAGCACAGTTCATCTCTGTAGCAATGAGAAAGTGATCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=299813.000000 s hg38.chr4_KI270789v1_alt 75888 39 + 205944 ----TCTACGGATATGCAGGAGGGAGTGCTGAAAGAACAGCTC s panTro5.chr4 192867583 39 + 194502333 ----TCTACGGATATGCAGGAGGGAGTGCTGAAAGAACAGCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751338 39 + 195804263 ----TCTACGGATATGCAGGAGGGAGTGCTGAAAGAACAGCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787784 39 + 4876863 ----TCTACGGATATGCAGGAGGGAGTGCTGAAAGAACAGCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673416 39 + 115148730 ----TCTACGGATATGCAGGAGGGAGTGCTGAAAGAACAGCTC i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188958643 39 + 190429646 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i rheMac8.chr5 I 1 I 7 s macFas5.chr5 187906125 39 + 189454096 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24288456 39 - 25927173 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3322915 38 + 4669795 ----TCTCCGG-TATCCAGGAGGGAGTGCTGAAAGAACAGCTC i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134282436 39 + 135778131 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2719357 39 - 2847728 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 848031 39 + 2368649 ----TCTACGGATATCCAGGAGGGAGTGCTGAAAGAACAGCTC i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189592079 38 - 190850796 ----TCTATTGACGGGCAGGCGGGAGCGCTG-GGGGACAGCTC i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13071931 38 - 14256875 ----TCTATTGACAGGCAGGTGGGAGTGCTG-AGGGACAGCTC i saiBol1.JH378165 I 1 C 0 s otoGar3.GL873580 11211626 36 - 11315646 ----TCTGTTGATAAGTAGGACAGAGTGCTGAGGGAACTG--- i otoGar3.GL873580 I 1 C 0 s dasNov3.JH570353 1418132 40 - 2520184 CCTAACTGCTGATGAACAGGGCGGAGTGCTAGAGGACCGG--- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=11049.000000 s hg38.chr4_KI270789v1_alt 75927 3 + 205944 ATG s panTro5.chr4 192867622 3 + 194502333 ATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751377 3 + 195804263 ATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787823 3 + 4876863 ATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673455 3 + 115148730 ATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187906164 3 + 189454096 ATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288495 3 - 25927173 ATG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134282475 3 + 135778131 ATG i chlSab2.chr7 C 0 I 4 s colAng1.NW_012116221v1 848070 3 + 2368649 ATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592117 3 - 190850796 GGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071969 3 - 14256875 AGG i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1418172 1 - 2520184 --G i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e manLeu1.NW_012102221v1 2719396 0 - 2847728 C e cerAty1.NW_012001672v1 3322953 0 + 4669795 C e rheMac8.chr5 188958682 7 + 190429646 I e otoGar3.GL873580 11211662 0 - 11315646 C a score=-450.000000 s hg38.chr4_KI270789v1_alt 75930 4 + 205944 AGGT- s panTro5.chr4 192867625 4 + 194502333 AGGT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751380 4 + 195804263 AGGT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787826 4 + 4876863 AGGT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673458 4 + 115148730 AGGT- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187906167 4 + 189454096 CGAC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288498 4 - 25927173 CGAC- i macNem1.NW_012013133v1 C 0 C 0 s calJac3.chr3 189592120 4 - 190850796 CGGC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071972 4 - 14256875 CAGC- i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1418173 4 - 2520184 -TATT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848073 0 + 2368649 C e manLeu1.NW_012102221v1 2719396 0 - 2847728 C e chlSab2.chr7 134282478 4 + 135778131 I e cerAty1.NW_012001672v1 3322953 0 + 4669795 C e rheMac8.chr5 188958682 7 + 190429646 I e otoGar3.GL873580 11211662 0 - 11315646 C a score=28037.000000 s hg38.chr4_KI270789v1_alt 75934 5 + 205944 AGTGC s panTro5.chr4 192867629 5 + 194502333 AGTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751384 5 + 195804263 AGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787830 5 + 4876863 AGTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673462 5 + 115148730 AGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958689 5 + 190429646 AGTGC i rheMac8.chr5 I 7 C 0 s macFas5.chr5 187906171 5 + 189454096 AGTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288502 5 - 25927173 AGTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322953 4 + 4669795 -GTGC i cerAty1.NW_012001672v1 C 0 I 8 s chlSab2.chr7 134282482 5 + 135778131 AGTGC i chlSab2.chr7 I 4 C 0 s manLeu1.NW_012102221v1 2719396 4 - 2847728 -GTGC i manLeu1.NW_012102221v1 C 0 I 8 s calJac3.chr3 189592124 5 - 190850796 AGTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13071976 4 - 14256875 AGCA- i saiBol1.JH378165 C 0 I 24 s dasNov3.JH570353 1418177 5 - 2520184 AGAGC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848073 0 + 2368649 C e otoGar3.GL873580 11211662 0 - 11315646 C a score=40288.000000 s hg38.chr4_KI270789v1_alt 75939 8 + 205944 AGGCAGAG s panTro5.chr4 192867634 8 + 194502333 AGGCAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751389 8 + 195804263 AGGCAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787835 8 + 4876863 AGGCAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673467 8 + 115148730 AGGCAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958694 8 + 190429646 AGGCAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906176 8 + 189454096 AGGCAGAG i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24288507 8 - 25927173 AGGCAGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322965 8 + 4669795 AGGCAGAG i cerAty1.NW_012001672v1 I 8 C 0 s chlSab2.chr7 134282487 8 + 135778131 AGGCAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719408 8 - 2847728 AGGCAGAG i manLeu1.NW_012102221v1 I 8 C 0 s calJac3.chr3 189592129 8 - 190850796 AGGCTTGG i calJac3.chr3 C 0 C 0 s dasNov3.JH570353 1418182 3 - 2520184 AAG----- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13071980 24 - 14256875 I e colAng1.NW_012116221v1 848073 0 + 2368649 C e otoGar3.GL873580 11211662 0 - 11315646 C a score=5500.000000 s hg38.chr4_KI270789v1_alt 75947 1 + 205944 G s panTro5.chr4 192867642 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751397 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787843 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673475 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958702 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906186 1 + 189454096 G i macFas5.chr5 I 2 C 0 s cerAty1.NW_012001672v1 3322973 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282495 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719416 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189592137 1 - 190850796 G i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 968425 61 - 2196201 I e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418185 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13071980 24 - 14256875 I e colAng1.NW_012116221v1 848073 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e otoGar3.GL873580 11211662 0 - 11315646 C a score=101307.000000 s hg38.chr4_KI270789v1_alt 75948 18 + 205944 CAGGTTGATGGCAGCAGT s panTro5.chr4 192867643 18 + 194502333 CAGGTTGATGGCAGCAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751398 18 + 195804263 CAGGTTGATGGCAGCAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787844 18 + 4876863 CAGGTTGATGGCAGCAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673476 18 + 115148730 CAGGTTGATGGCAGCAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958703 18 + 190429646 CAGGCTGATGGCAGCAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906187 18 + 189454096 CAGGTTGATGGCAGCAGT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3322974 18 + 4669795 CAGGCTGATGGCAGCAGT i cerAty1.NW_012001672v1 C 0 T 35 s chlSab2.chr7 134282496 18 + 135778131 CAGGCTGATGGCAGCAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719417 18 - 2847728 CAGGCTGATGGCAGCAGT i manLeu1.NW_012102221v1 C 0 T 35 s colAng1.NW_012116221v1 848073 7 + 2368649 -----------CAACAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592138 18 - 190850796 TGGGTTGACGGCAGCAGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 968486 18 - 2196201 TGGGTTGATGGCAGCGGT i cebCap1.NW_016107886v1 I 61 C 0 s otoGar3.GL873580 11211662 11 - 11315646 -----GGAGGGTAGCA-- i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418185 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13071980 24 - 14256875 I e macNem1.NW_012013133v1 24288515 0 - 25927173 C a score=7800.000000 s hg38.chr4_KI270789v1_alt 75966 1 + 205944 G s panTro5.chr4 192867661 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751416 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787862 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673494 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958721 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906205 1 + 189454096 G i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3322957 1 + 4669795 G i cerAty1.NW_012001672v1 T 35 C 0 s chlSab2.chr7 134282514 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719400 1 - 2847728 G i manLeu1.NW_012102221v1 T 35 C 0 s colAng1.NW_012116221v1 848080 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592156 1 - 190850796 G i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 968504 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418185 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13071980 24 - 14256875 I e macNem1.NW_012013133v1 24288515 0 - 25927173 C e otoGar3.GL873580 11211673 0 - 11315646 C a score=11265.000000 s hg38.chr4_KI270789v1_alt 75967 2 + 205944 AC s panTro5.chr4 192867662 2 + 194502333 AC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751417 2 + 195804263 AC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787863 2 + 4876863 AC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673495 2 + 115148730 AC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958722 2 + 190429646 AC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906206 2 + 189454096 AC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3322958 2 + 4669795 AC i cerAty1.NW_012001672v1 C 0 I 35 s chlSab2.chr7 134282515 2 + 135778131 AC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719401 2 - 2847728 AC i manLeu1.NW_012102221v1 C 0 I 35 s calJac3.chr3 189592157 2 - 190850796 GC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072004 2 - 14256875 GC i saiBol1.JH378165 I 24 C 0 s cebCap1.NW_016107886v1 968505 2 - 2196201 GC i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418185 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848081 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e otoGar3.GL873580 11211673 0 - 11315646 C a score=124573.000000 s hg38.chr4_KI270789v1_alt 75969 37 + 205944 TCCAATTTGCTCTCACTCTGTGTCTC---CATTCACTTTG s panTro5.chr4 192867664 1 + 194502333 T--------------------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751419 37 + 195804263 TCCAATTTGCTCTCACTCTGTGTCTC---CATTCACTTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787865 37 + 4876863 TCCAATTTGCTCTCACTCTGTGTCTC---CATTCACTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673497 37 + 115148730 TCCAATTTGCTCTCACTCTGTGTCTC---CATTCCCTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958724 24 + 190429646 TCCAGTTTGCTCTCA--CTCTGTCTC-------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906208 35 + 189454096 TCCAGTTTGCTCTCA--CTCTGTCTC---Cattcactttg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3322995 37 + 4669795 TCCAGTTTGCTCTCActctctgtctc---cattcattttg i cerAty1.NW_012001672v1 I 35 C 0 s chlSab2.chr7 134282517 37 + 135778131 TCCAGTTTGCTCTCActctctgtgtc---cattcactttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719438 37 - 2847728 TCCAGTTTGCTCTCActctctgtctc---cattcactttg i manLeu1.NW_012102221v1 I 35 C 0 s calJac3.chr3 189592159 34 - 190850796 TCCGATTTGCTCTCA--CTCTGTC-C---CATTCACTGTG i calJac3.chr3 C 0 T 71 s saiBol1.JH378165 13072006 35 - 14256875 TCCAACTTGCTCTCA--CTCTGTCTC---CATTCACTTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968507 35 - 2196201 TCCAATTTGCCCTCA--CTCTGTCTC---cattcactttg i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1418185 15 - 2520184 --------------------TGTTTCACACATTCA----- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848081 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e otoGar3.GL873580 11211673 0 - 11315646 C a score=7497.000000 s hg38.chr4_KI270789v1_alt 76006 2 + 205944 GT s panPan2.chr4 192751456 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787902 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673534 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187906243 2 + 189454096 gt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3323032 2 + 4669795 gt i cerAty1.NW_012001672v1 C 0 T 74 s chlSab2.chr7 134282554 2 + 135778131 gt i chlSab2.chr7 C 0 T 74 s manLeu1.NW_012102221v1 2719475 2 - 2847728 gt i manLeu1.NW_012102221v1 C 0 T 74 s calJac3.chr3 189592122 2 - 190850796 GC i calJac3.chr3 T 71 C 0 s saiBol1.JH378165 13072041 2 - 14256875 GT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 968542 0 - 2196201 C e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418200 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848081 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e rheMac8.chr5 188958748 0 + 190429646 C e panTro5.chr4 192867665 0 + 194502333 C e otoGar3.GL873580 11211673 0 - 11315646 C a score=12976.000000 s hg38.chr4_KI270789v1_alt 76008 3 + 205944 AGT s panPan2.chr4 192751458 3 + 195804263 AGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787904 3 + 4876863 AGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673536 3 + 115148730 AGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187906245 3 + 189454096 agt i macFas5.chr5 C 0 T 64 s cerAty1.NW_012001672v1 3322960 3 + 4669795 AGT i cerAty1.NW_012001672v1 T 74 C 0 s chlSab2.chr7 134282482 3 + 135778131 AGT i chlSab2.chr7 T 74 C 0 s manLeu1.NW_012102221v1 2719403 3 - 2847728 AGT i manLeu1.NW_012102221v1 T 74 C 0 s calJac3.chr3 189592124 3 - 190850796 AGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072043 3 - 14256875 CGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968542 2 - 2196201 -gt i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11211673 3 - 11315646 AGG i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418200 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848081 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e rheMac8.chr5 188958748 0 + 190429646 C e panTro5.chr4 192867665 0 + 194502333 C a score=4190.000000 s hg38.chr4_KI270789v1_alt 76011 1 + 205944 G s panPan2.chr4 192751461 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787907 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673539 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3322963 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282485 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719406 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189592127 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072046 1 - 14256875 G i saiBol1.JH378165 C 0 T 67 s cebCap1.NW_016107886v1 968544 1 - 2196201 a i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11211676 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418200 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e colAng1.NW_012116221v1 848081 0 + 2368649 C e macNem1.NW_012013133v1 24288515 0 - 25927173 C e macFas5.chr5 187906248 64 + 189454096 T e rheMac8.chr5 188958748 0 + 190429646 C e panTro5.chr4 192867665 0 + 194502333 C a score=15669.000000 s hg38.chr4_KI270789v1_alt 76012 4 + 205944 CAGG s panPan2.chr4 192751462 4 + 195804263 CAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787908 4 + 4876863 CAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673540 4 + 115148730 CAGG i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3322964 4 + 4669795 CAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282486 4 + 135778131 CAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719407 4 - 2847728 CAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848081 4 + 2368649 CAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592128 4 - 190850796 CAGG i calJac3.chr3 C 0 I 1 s otoGar3.GL873580 11211677 4 - 11315646 CATG i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 968545 0 - 2196201 C e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418200 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e saiBol1.JH378165 13072047 67 - 14256875 T e macNem1.NW_012013133v1 24288515 0 - 25927173 C e macFas5.chr5 187906248 64 + 189454096 T e rheMac8.chr5 188958748 0 + 190429646 C e panTro5.chr4 192867665 0 + 194502333 C a score=2915.000000 s hg38.chr4_KI270789v1_alt 76016 3 + 205944 CAG s panPan2.chr4 192751466 3 + 195804263 CAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787912 3 + 4876863 CAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673544 3 + 115148730 CAG i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3322968 3 + 4669795 CAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282490 3 + 135778131 CAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719411 3 - 2847728 CAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848085 3 + 2368649 CAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592133 2 - 190850796 TT- i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13071980 2 - 14256875 CA- i saiBol1.JH378165 T 67 C 0 s otoGar3.GL873580 11211681 3 - 11315646 CAG i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 968545 0 - 2196201 C e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418200 0 - 2520184 C e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e macNem1.NW_012013133v1 24288515 0 - 25927173 C e macFas5.chr5 187906248 64 + 189454096 T e rheMac8.chr5 188958748 0 + 190429646 C e panTro5.chr4 192867665 0 + 194502333 C a score=228338.000000 s hg38.chr4_KI270789v1_alt 76019 45 + 205944 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAATTTGCTCTCA-ctctct s panTro5.chr4 192867665 20 + 194502333 ---------------------------------------------------------------------------------------------------CCAATTTGCTCTCA-CTCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751469 45 + 195804263 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAATTTGCTCTCA-CTCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787915 45 + 4876863 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAATTTGCTCTCA-CTCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673547 119 + 115148730 AGGCAGGTTGATGGCAGCAGTGACTCCAATTTGCTCTCACTCTGTGTCTCCATTCCCTTTGGTAGTGCAGGCAGAGGCAGGTTGATGGCAGCAGTGACTCCAATTTGCTCTCA-CTCTCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187906184 43 + 189454096 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA---CTCT i macFas5.chr5 T 64 C 0 s macNem1.NW_012013133v1 24288515 43 - 25927173 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA---CTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3322971 45 + 4669795 AGGCAGGCTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA-ctctct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282493 45 + 135778131 AGGCAGGCTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA-ctctct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719414 45 - 2847728 AGGCAGGCTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA-ctctct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848088 45 + 2368649 AGGCAGGTTGATGG--------------------------------------------------------------------------CAGCAGTGACTCCAGTTTGCTCTCA-ctctct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592135 45 - 190850796 GGGTGGGTTGACGG--------------------------------------------------------------------------CAGCAGCGGCTCCGATTTGCTCTCA-CTCTGT i calJac3.chr3 C 0 I 13 s saiBol1.JH378165 13071982 43 - 14256875 GGGTGGGTTGATGG--------------------------------------------------------------------------CAGCGGTGGCTCCAACTTGCTCTCA-CTCT-- i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11211684 43 - 11315646 ---AAGGAAGATCA--------------------------------------------------------------------------CAGCAATGGCTCTGACATGCTCTCACCTCCCT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1418200 40 - 2520184 --GTAGATGGATTG--------------------------------------------------------------------------CAGCAGTGACTC-AATGTGTTTGTG-tccc-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 968545 0 - 2196201 C e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e rheMac8.chr5 188958748 0 + 190429646 C a score=214527.000000 s hg38.chr4_KI270789v1_alt 76064 29 + 205944 gccttca-ttcactttggtagtgtcctctt s panTro5.chr4 192867685 29 + 194502333 gcctcca-ttcactttggtagtgtcctctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751514 29 + 195804263 gcctcca-ttcactttggtagtgtcctctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787960 29 + 4876863 gcctcca-ttcactttggtagtgtcctctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673666 29 + 115148730 gcctcca-ttcactttggtagtgtcctctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958748 24 + 190429646 -----Ca-ttcactttggtagtatcctctt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906227 29 + 189454096 GTCTCCa-ttcactttggtagtatcctctt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288558 29 - 25927173 GTCTCCa-ttcactttggtagtatcctctt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323016 29 + 4669795 gtctcca-ttcattttggtggtatcctctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282538 29 + 135778131 gtgtcca-ttcactttggtagtatcctgtt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719459 29 - 2847728 gtctcca-ttcactttggtggtatcctctt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848133 29 + 2368649 gtctcca-ttcactttggtagtatcctctt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13072025 29 - 14256875 GTCTCCA-TTCACTTTGGTCGTGTCCTCTG i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11211727 30 - 11315646 GCTCCTACTTAACTTTGGTCATGccctctc i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1418240 29 - 2520184 gtttcca-cgtgctttggtagtgccctctg i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189592180 13 - 190850796 I e cebCap1.NW_016107886v1 968545 0 - 2196201 C e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=1170472.000000 s hg38.chr4_KI270789v1_alt 76093 139 + 205944 acacagacgctgggattggaaaccagattgctttgacaaatgggaaattagcaaatatgagatgtgcag--------caacttgagaagt--gctcatgtgctgaggcatgtttattgatacactt-agagacccgagaccactatgcaa s panTro5.chr4 192867714 141 + 194502333 ccacagacgctgggattggaaaccagattgctttgacaaacgggacattagcaaatatgagatgtgcgg--------caacttgagaagttgcctcatgtgctgaggcatgtttattgatacactt-agagacccgagaccactatgcaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751543 139 + 195804263 ccacagacgctgggattggaaaccagattgctttgacaaacgggacattagcaaatatgagatgtgcgg--------caacttgagaagt--gctcatgtgctgaggcatgtttattgatacactt-agagacccgagaccactatgcaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3787989 139 + 4876863 acacagacgctgggattggaaaccagattgctttgagaaacgggacattagcaaatatgagatgtgcag--------caacttgagaagt--gctcatgtgctgaggcatgtttattgatacactt-agagacccgagaccactatgcaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673695 139 + 115148730 acacagacgctgggattggaaaccagattgctttgacaaatggggcattagcaaatatgagacatgcaa--------caacttgagaagt--gctcatgtgctgaggcatgtttattgatacactt-agagacctgagaccactatgcaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958772 135 + 190429646 --acagacgctgggattggaaaccaaattgctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgacacactt-agagacccaagaccactacgcaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906256 135 + 189454096 --acagacgctgggattggaaaccaaattgctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgacacactt-agagacccaagaccactacgcaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288587 135 - 25927173 --acagacgctgggattggaaaccaaattgctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgacacactt-agagacccaagaccactacgcaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323045 135 + 4669795 --acagacgctgggattggaaagcagattgctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgatacactt-agagacctgagaccactatgcaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282567 135 + 135778131 --acagacgctgggattggaaaccagattgctttgacaaatgaggcgttagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgatacactt-agagacccgagaccactacgcaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719488 136 - 2847728 --acagacgctgggattggaaaccagatggctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgatacacttaagagaccccagaccactatgcaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848162 135 + 2368649 --acagatgctgggattggaaaccagattgctttgacaaatgaggcattagcaaatatgagacatgcag--------caacttgagaagc--ac-catgcactgaggc-tgtttattgatacactt-agagacccgagaccactacacaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592193 139 - 190850796 ACACAGCCGCTGGGATTGGAAACCAGATTGCTTTGACAAGTGGGGCGCTAGCAAATATGAGACTTGCAG--------CCACTTGAGAAGT--GCTCATGCACTGAAGTATGTTTACTGATCCATTT-AGAGTCCCAAGACCCCTGCGCAA i calJac3.chr3 I 13 C 0 s saiBol1.JH378165 13072054 139 - 14256875 ACACAGCCGCTGGGATTGGAAACTGGATTGCTTTGACAAGTGGGGCACTAGCAAATATGGGTCTTGCAG--------CAACTTGAGAAGT--ACTTGTGCACTGAAGCATGTTTTTTGATGCATtt-ggagacccaagaccactatgcaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968545 127 - 2196201 ------------ggattggaaaccagattgctttgacaagtggggcaccagcaaatatgagtcttgcag--------cagcttgagaagt--actgctgcactgaagcatgtTGATTCATGCATTT-AGAGACCCAAGACCAGTATGCAA i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11211757 83 - 11315646 atacagactctgggactggatatcagattgctttgacaaatgggacattagccaatacgttacattcag--------aaattcaaaaact--g--------------------------------------------------------- i otoGar3.GL873580 C 0 I 79 s dasNov3.JH570353 1418269 146 - 2520184 atacagtctctgggattggtcatctgattactttggccaatggggcatttgcaaatatgaggcctgtaggcatttgaacatttgaaaaga--gttcatttattgaggtttgcttcttgCTGCACCT-GGAGCCCTGAGGCCACC-CGCAA i dasNov3.JH570353 C 0 I 50 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I a score=2352094.000000 s hg38.chr4_KI270789v1_alt 76232 304 + 205944 atatgcgcccaccagccctctggaggatgagatgattgcctccaacaactgagccaagcatggttttatttttgtttttgtttccgttttggttttcagatggagtctcacttttttgcccaggctggagtgcagtggtgtgatcgcagctcaatgcaacctctg-cttcccaggttcaagcaattcttctgtctcagcctcctgagtagctgggactacaggagtgtgccaccatgcccggctaatttttgtatttttagtagagatggggtttcaccatgttagtcaggctggtctcgaactc s panTro5.chr4 192867855 304 + 194502333 atatgctcccaccagccctctggaggatgagatgattgcctccaacaactgagccaagcatggttttatttttgtttttgtttccgtttttgttttcagatggagtctcgcttttttgcccaggccggagtgcagcggtgtgatcgcagctcactgcaacctttg-cttcccaggttcaagcaattcttctgtctcagcctcctgactagctgggactacaggagcgtgccaccatgcccggctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcgaactc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751682 304 + 195804263 atatgctcccaccagccctctggaggatgagatgattgcctccaacaactgagccaagcatggttttatttttgtttttgtttccgtttttgttttcagatggagtctcgcttttttgcccaggccggagtgcagcggtgtgatcgcagctcactgcaacctttg-cttcccaggttcaagcaattcttctgtctcagcctcctgactagctgggactacaggagcgtgccaccatgcccggctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcgaactc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788128 304 + 4876863 atatgctcccaccagccctctggaggatgagatgattgcctccaacaactgagccaagcatggttttatttttgtttttgtttccgtttttgttttcagatggagtctcgcttttttgcccaggctggagtgcagtggtgtgatcgcagctcactgcaacctctg-cttcccaggttcaagcaattcttctgtctcagcctcctgagtagctgggactacaggagcgtgccaccatgcccggctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggctggtctcgaactc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112673834 301 + 115148730 atatgctcccaccagccctctggaggatgagatgattgcccccaacaactgagccaagcatggttttattttt-tatttattt--atttattttttcagatggagtcttgcttttttgcccaggctggagtgcagtggtgtgatagcgtctcactgcaacctctg-cctcccaggttcaagcaattcttctgtctcagcctcctgagtatctgggactacaggagtgtgccaccatgcccggctaatttttgtatttttagtagagatggggtttcatcatgttggtcaggctggtctcgaactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188958907 297 + 190429646 atatgctccgaccagccctctggaggatgagatgactgcccccaacaactgagccaagcg-----ttgtttt--gttttgtttttgtttttgttttcagatgaagtctcggttttttgcccagactggagtgcagtggtgagatcttggctcactgcaacctttg-cctcccgggttcaagcaattcttctgtttcggtctcctgagtagctgggattacaggtgcccgtcaccatgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcaaactc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906391 302 + 189454096 atatgctccgaccagccctctggaggatgagatgactgcccccaacaactgagccaagcgttgttttgtttt--gttttgtttttgtttttgttttCagatgaagtctcggttttttgcccagactggagtgcagtggtgagatcttggctcactgcaacctttg-cctcccaggttcaagcaattcttctgtttcggtctcctgagtagctgggattacaggtgcccgtcaccatgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcaaactc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24288722 302 - 25927173 atatgctccgaccagccctctggaggatgagatgactgcccccaacaactgagccaagcgttgttttgtttt--gttttgtttttgtttttgttttCagatgaagtctcggttttttacccagactggagtgcagtggtgagatcttggctcactgcaacctttg-cctcccgggttcaagcaattcttctgtttcggtctcctgagtagctgggattacaggtgcccgtcaccatgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcaaactc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323180 301 + 4669795 atatgctccgaccagacctctggaggatgagatgactgcccccaacaactgagcccagcggagttttgtttt--gtttggtttttgtttttgttttcagatgaagtcttgg-tttttgcccagactggagtgcagtggtgagatcttggctcactgcaacctctg-cctcccgggttcaagcaattcttctgtctcgctctcctgagtagctgggattacaggtgcctgccaccatgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcaaactc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282702 296 + 135778131 atatgctccgactagccctctggaagatgagatgactgcccccaacaactgagccaagcgtagt-----ttt--gttttg-ttttgtttttgttttcaaatgaagtcttggttttttgcccagacaggagtgcagtggtgagatcttggctcactgtaacctctg-cctcccgggttcaagcaattcttctgtctcgctctcctgagtagctgggattacaggtgcctgccaccatgcccagctaatttttgtgtttttagtagagagaacgtttcaccatgttggtcaggctggtctcaaactc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719624 300 - 2847728 atacgctccgaccagccctctggaaggtgagatgactgcccccagcaactgagcccagcggagttttg-ttt--gttttgtttttgtttttgttttcagatgaagtcttgg-tttttgcccagactggagtgcagtggtgagatcttggctcactgcaacctctg-cctcccgggttcaagcaattcttctgtctcgctctcctgagtagctgggattacaggcgcccgccaccatgcccagctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtctcaaactc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848297 302 + 2368649 atatgctccgaccagccctctggaggatgagatgactgcccccagcaactaagccaagcctagttttgttta--gttttgtttttgtttttgttttcagatgaagtctgggttttttgcccagactggagtgcagtggtgagatctcggctcactgcaacctctg-cctccagggttcaagcagttcttctgtctcagtctcctgagtagctgggattacaggcacccgctactatgcctggctaatttttgtatttttagtagagacaaggtttcaccatgttggtcaggctggtcttgaactc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592332 293 - 190850796 ATACGCCCCGA-CAGCCCTCGGGAGGCTGAGGTGACTGCCCCCAACAACCGAGCCAACCATGGt----------tttttgtttgtttgcttgtttcgagatggagcctcgctttgttgcccaggctggagtgcagtggtgcgatctcggctcactgcagcctctg-cctcccgggttcaagcaattcttctgcctcagcttcctgaatagctgggactacaggtgcgcatcaccatgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggcccggctggtctcaaactc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072193 271 - 14256875 atacaccccgaccagccctctggaggatgagatgactgcccccaacaactaagtcaa---------------------------------tgttttgagatggagtctcacgttgttgcccaggttggagtgcagtggtgtgatctcagctcactgcaacctctg-cctcccgggttaaagcaattcttctgtctcagcttcctgagtatctgggactacaggcgcacgccaccatgcccagctaatttttgtatttttagtagagatgaggtttcaccatgttggtcaggctggtctcgaactc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968672 295 - 2196201 ATACGCCCCGACCAGTCCTCTGGAGGATGACATGACTGCCCCCAACAACTAAGGCAGCCGTGGt----------tttttgtttgtttgcttgttttgagatggagtcttgctttgttgcccaggctggagtgcagtggtgtgatcttggctcaccgcagcctctgtccccccgggttcaagcaattcttctgtctcagccttctgagtagctgggactataggcgcacgccaccatgtccagctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactc i cebCap1.NW_016107886v1 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e dasNov3.JH570353 1418415 50 - 2520184 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e otoGar3.GL873580 11211840 79 - 11315646 I a score=210514.000000 s hg38.chr4_KI270789v1_alt 76536 28 + 205944 ctgacctcaggtgatccactcacttcgt s panTro5.chr4 192868159 28 + 194502333 ctgacctcaggtgatccactcacttcgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192751986 28 + 195804263 ctgacctcaggtgatccactcacttcgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788432 28 + 4876863 ctgacctcaggtgatccactcacttcgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674135 28 + 115148730 ctgacctcaggtgatccactcacttcgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959204 28 + 190429646 ttaacctcaggtgatccgccctccttgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906693 28 + 189454096 ttaacctcaggtgatccgccctccttgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289024 28 - 25927173 ttaacctcaggtgatccgccctccttgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323481 28 + 4669795 ctaacctcaggtgatccgccctccttgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134282998 28 + 135778131 ctaacctcaggtgatccgccctccttgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719924 28 - 2847728 ctgacctcaggtgatccgccctccttgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848599 28 + 2368649 atgacctcaggtgatccaccctccttgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592625 28 - 190850796 ctggcctcaggtgatccacctgcctcgg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072464 28 - 14256875 ctggcctcaggtgatctacctgcctcag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968967 28 - 2196201 ctggcctcaggtgatccacccgcctcgg i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1418465 27 - 2520184 CCAGCCACAGCTGA-CCAACAACTCCAT i dasNov3.JH570353 I 50 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e aotNan1.NW_018492112v1 3360458 1892 - 5030052 I e otoGar3.GL873580 11211840 79 - 11315646 I a score=150554.000000 s hg38.chr4_KI270789v1_alt 76564 14 + 205944 cctcccaaagtgct s panTro5.chr4 192868187 14 + 194502333 cctcccaaagtgct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752014 14 + 195804263 cctcccaaagtgct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788460 14 + 4876863 cctcccaaagtgct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674163 14 + 115148730 cctcccaaagtgct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959232 14 + 190429646 cctcccaaagtgct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906721 14 + 189454096 cctcccaaagtgct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289052 14 - 25927173 cctcccaaagtgct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323509 14 + 4669795 cctcccaaagtgct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283026 14 + 135778131 cctcccaaagtgct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719952 14 - 2847728 cctcccaaagtgct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848627 14 + 2368649 ccttccaaggtgct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592653 14 - 190850796 cctcccaaagtgct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072492 14 - 14256875 cctcccaaagtgct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 968995 14 - 2196201 cctcccaaagtgct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362350 14 - 5030052 cctcccaaagtgct i aotNan1.NW_018492112v1 I 1892 C 0 s dasNov3.JH570353 1418492 4 - 2520184 -CTCT--------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I e otoGar3.GL873580 11211840 79 - 11315646 I a score=284589.000000 s hg38.chr4_KI270789v1_alt 76578 29 + 205944 gggattacaagcgtgagccactgcgccca s panTro5.chr4 192868201 29 + 194502333 gggattacaagcgtgagccactgtgccta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752028 29 + 195804263 gggattacaagcgtgagccactgtgccta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788474 29 + 4876863 gggattacaagcgtgagccactgcgccca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674177 29 + 115148730 gggattacaagcatgagccaccgtgccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959246 29 + 190429646 ggggttacaagtgtgagccactgtaccca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906735 29 + 189454096 ggggttacaagtgtgagccactgtaccca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289066 29 - 25927173 ggggttacaagtgtgagccactgtaccca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323523 29 + 4669795 gggattacaagtgtgagccactgtgccca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283040 29 + 135778131 ggggttacaagtgtgagccactgtaccca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719966 29 - 2847728 ggggttacaagtgtgagccactgtgccca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848641 29 + 2368649 gggattacaagtgtgagccactgtgccta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592667 29 - 190850796 gggattacaggcgtgagccactgagctca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072506 29 - 14256875 gggattacaggcatgaaccactgagctca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969009 29 - 2196201 gggatcacaggtgtaggccactgagctca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362364 29 - 5030052 gggattacaggcgtgagccaccgcactca i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11211919 29 - 11315646 AGAGTTACAGACTTGCTCCAACAACCCCA i otoGar3.GL873580 I 79 C 0 s dasNov3.JH570353 1418496 25 - 2520184 GAGGTTACCAACACCGGCCAT----CTCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e canFam3.chr16 16912197 5827 - 59632846 I e mm10.chr8 86544015 10809 - 129401213 I a score=1762955.000000 s hg38.chr4_KI270789v1_alt 76607 175 + 205944 accctgagccaaccatggtttaaccaccagtg---atctgagtggccaggtggtctctgatgatccacaagctgaccaaggttatcacagatgctcacataagtct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc s panTro5.chr4 192868230 175 + 194502333 accctgagccaaccatggtttaaccaccagtg---atctgagtggccaggtggtctctgatgatccacaagctgaccaaggttatcacagatgctcacatgagtct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752057 175 + 195804263 accctgagccaaccatggtttaaccaccagtg---atctgagtggccaggtggtctctgatgatccacaagctgaccaaggttatcacagatgctcacatgagtct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788503 175 + 4876863 accctgagccaaccatggtttaaccaccagtg---atctgagtggccaggtggtctctgatgatccacaagctgaccaaggttatcacagatgctcacatgagtct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674206 175 + 115148730 accctgagccaaccatagtttaaccaccagtg---atctgagtggccgggtggtctttgatgatccacgagctgaccaaggttatcacagatgctcacatgagtct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggccgtc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959275 175 + 190429646 accctgagccaaccttggtttaaccaccagtt---atctgagtggccaggtggtctttgatgatccacaagctgaccacggttatcacagatgctcacgtgagtct-agcccag-acgagaacatccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906764 175 + 189454096 accctgagccaaccttggtttaaccaccagtg---atctgagtggccaggtggtctttgatgatccacaagctgaccaaggttatcacagatgctcacgtgagtct-agcccag-acgagaacatccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289095 175 - 25927173 accctgagccaaccttggtttaaccaccagtg---atctgagtggccaggtggtctttgatgatccacaagctgaccaaggttatcacagatgctcacgtgagtct-agcccag-acgagaacatccaagcagagtgcagctgaaattgctt--tcatag---a---atgagcta-ataaatggtcgtc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323552 174 + 4669795 accctgagccagccatggtttaaccaccagtg---atctgagtgg-caggtggtctttgatgatccacgagctgaccaaggttatcacagatgctcacgtgagtct-ggcccag-acgataacatccaagcagagtgcagctgaaattgctt--tcatag---g---atgagcta-ataaatggttgtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283069 163 + 135778131 accctgagccaaccttggtttaactaccagtg---atctgagtggccaggtggtctttgataatccacgagctgaccaaggttatcacagatgctcacgtgagtct-agcccag-aggagaacaaccaagcagagtgcagctgaaattgctt--tcatag-------------------aatggtcatc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2719995 174 - 2847728 accctgagccagccatggtttaaccaccagtg---atctgagtgg-caggtggtctttgatgatccacgagctgaccaaggttatcacagatgctcacgtgagtct-ggcccag-acgagaacatccaagcagagtgcagctgaaattgctt--tcacag---a---atgagcta-ataaatggtcgtc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848670 156 + 2368649 accctgagccaaccatggtttaaccacc------------------taggtggtctctgatgatccacgagctgaccaaggttatcacagatgctcacatgagtct-agcccag-accagtacatccaagcagagtgcagctgaaattgctt--tcatag---a---atgagct-----aatggtcgtc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592696 173 - 190850796 gccCTGAGCCAACCATGGTTTGACTGCCAGTT---ACCTGAGTGGCCAGGAGGTCTTGGATGATCCAGGAGCTGACCAAGGTTatcacagatgctcacatgagtct-agcccag-accagaacttccaagcaaagt--agctgaaattgctt--tcatag---a---atgagctacataaacgg-tgtc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072535 176 - 14256875 gccctgagccaaccatgatttgaccgccagtt---acctgagtggccaggaggtcttggatgatcccggagctgaccaaggctatcacagatgctcacgtgagtct-agcctgg-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---g---atgagttacataaacggttgtc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969038 161 - 2196201 gccCTGAGCCAACCATGGTT------------------tgagtggccaggaggtcttggatgatccaggagctgaccaaggttatcacagatgctcatatgagcct-agcccag-accagaacttccaagcagagtgcagctgaaattgctt--tcatag---a---atgagctacataaatggttgtc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362393 176 - 5030052 gccCTGCGCCAACCATTGTTTGACCACCGGTT---ACCTGAGTGGCCAGGAGGTCTTGGATCATCCAGAAGCTGACCAAGGTTatcacagatgctcacatgagtct-cgcccag-accagaacttccaagtagcgtgcagctgaaattgctt--tcatag---a---atgtgctacataaacggttgtc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11211948 162 - 11315646 --------CCAACCACCGTTCAACTGCTAGAT---ATGCGAGAAGCCAGGTGGGCTCAGCTTACCCACATGCTGATGGAGGTTatcacaggagctcagatgagtcc-gcctgag-actagaatgttccagcagagtgtaggctaaattgctt--cc---t---a---atataata-atgaacgg--agc i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16918024 174 - 59632846 ACCCCAAACTAATAGTTagtcatccaccaactcaaatctgagaggccaggctgtctcagttgatgctcaggctg------------acagatgctcaggtaactctgagactagaacctgaaccttccggcaaaatctagctcaagttgcctcctcatagaata---atgaactgaataaatggctatt i canFam3.chr16 I 5827 C 0 s dasNov3.JH570353 1418521 126 - 2520184 ------------------------------------GCACAACGACCAG---------------------ACTGGTTGAGGTTatcacagatgaacagatgaatct-agctgag-gccagaacaccc-agcagaccttaccccaaaatgcctacccacag---agtcatgggctacataagtggatgtt i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3903023 2561 + 3993831 I e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I a score=438205.000000 s hg38.chr4_KI270789v1_alt 76782 34 + 205944 atgtt-a-aaccagtaaggttaag-tggtttgttaca s panTro5.chr4 192868405 34 + 194502333 atgtt-a-atccagtaaggttaag-tggtttgttaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752232 34 + 195804263 atgtt-a-atccagtaaggttaag-tggtttgttaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788678 34 + 4876863 atgtt-a-aaccagtaaggttaag-tggtttgttaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674381 34 + 115148730 atgtt-a-aaccagtatggttaag-tggtttgttaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959450 34 + 190429646 atgtt-a-aaccagtaaggtgaag-tggtttgttaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906939 34 + 189454096 atgtt-a-aaccagtaaggtgaag-tggtttgttaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289270 34 - 25927173 atgtt-a-aaccaataaggtgaag-tggtttgttaca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323726 34 + 4669795 atgtt-a-aaccagtaagctaaag-tggtttgttaca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283232 34 + 135778131 atgtt-a-aaccagtaaggtaaag-tggtttgttaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2720169 35 - 2847728 atgttaa-aaccagtaagctaaag-tggtttgttaca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848826 34 + 2368649 atgtt-a-aaccagtaaggtaaag-tggtttgttaca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189592869 34 - 190850796 acgtt-a-aaccagtggggttagc-tggtttgttaca i calJac3.chr3 C 0 I 441 s saiBol1.JH378165 13072711 34 - 14256875 atgtt-a-aaccagtgaggttagg-tggtttgttatg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969199 34 - 2196201 acgtt-a-aaccagtgaggttagg-tggtttgttaca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362569 34 - 5030052 atgtt-a-aagcagtgaggttagg-tggtttgttacg i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3905584 34 + 3993831 atgtt-a-aaccaccaaggttagg-tggtttgttaca i proCoq1.NW_012145301v1 I 2561 C 0 s otoGar3.GL873580 11212112 34 - 11315646 atgtt-a-agccaataatgttggg-aggtttgttata i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16918198 35 - 59632846 gtatt-g-aactaataaggttgagacagtttgttata i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1418647 35 - 2520184 atatt-agagccagaaaggctggg-tgattcgttaca i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I a score=298289.000000 s hg38.chr4_KI270789v1_alt 76816 25 + 205944 cagcaaaagctaactgacacaGTGC s panTro5.chr4 192868439 25 + 194502333 cagcaaaagctaactgacacaGTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752266 25 + 195804263 cagcaaaagctaactgacacaGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788712 25 + 4876863 cagcaaaagctaactgacacaGTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674415 25 + 115148730 cagcaaaagctaactgacacaGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959484 25 + 190429646 cagcaaaagctaactgacacaATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906973 25 + 189454096 cagcaaaagctaactgacacaATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289304 25 - 25927173 cagcaaaagctaactgacacaATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323760 25 + 4669795 cagcaaaagctaactgacacaATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283266 25 + 135778131 cagcaaaagctaactgacacaATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2720204 25 - 2847728 cagcaaaagctaactgacacaATGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848860 25 + 2368649 cagcaaaagctaactgacacaATAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189593344 25 - 190850796 cagcaaaacctaaccgacacaGTGT i calJac3.chr3 I 441 C 0 s saiBol1.JH378165 13072745 25 - 14256875 tagcaaaatctaacccacacaGTGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969233 25 - 2196201 tagcaaaacctaaccgacacaGTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362603 25 - 5030052 tagcaaaacctaaccgacacaGTGT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3905618 21 + 3993831 gagcagaagctgac----ATAGTGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11212146 19 - 11315646 gggcagcagctgac------AGTGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16918233 25 - 59632846 aattaaaagctaactgacataGCAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1418682 22 - 2520184 cagcaaaagctcactgacacaG--- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17481078 3855 - 93316391 I e mm10.chr8 86544015 10809 - 129401213 I a score=2576883.000000 s hg38.chr4_KI270789v1_alt 76841 177 + 205944 ATTTAACTACTTCAATTCTGATAGCCCATCACAGAATATTTTAGCTAAGAAC------TA---CATCTAATTTA--TAGTCCTTTATATTTTTTTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACG--TTTTTGTTACCTATGTAGACAATG s panTro5.chr4 192868464 180 + 194502333 ATTTAACTACTTCAATTCTGATAGCCCATCACAGAATATTTTAGCTGAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTTTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACG--TTTTTGTTACCTATGTAGACAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752291 180 + 195804263 ATTTAACTACTTCAATTCTGATAGCCCATCACAGAATATTTTAGCTGAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTTTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACG--TTTTTGTTACCTATGTAGACAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788737 180 + 4876863 ACTTAACTACTTCAATTCTGATAGCCCATCACAGAATATTTTAGCTAAGAAC------TACTTCGTCTAATTTA--TAGTCCTTTATATTTTTTTCTG-TTGGACGCATTTCACAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACG--TTTTTGTTACCTATGTAGACAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674440 180 + 115148730 ATTTAACTACTTCAATTCTGATAGCCCATCACAGAATATTTTAGCTAAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAGTGCATCATTATGCATACG--TTTTTGTTACCTATGTAGACGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959509 180 + 190429646 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------AACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACA--TTTTTGTTACCTATGTAGACGATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187906998 180 + 189454096 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------AACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACA--TTTTTGTTACCTATGTAGACGATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289329 180 - 25927173 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------AACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACA--TTTTTGTTACCTATGTAGACGATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323785 180 + 4669795 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATGTA--TTTTTGTTACCTATGTAGACGATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283291 179 + 135778131 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------TACTTCATCTAATTTA--TGGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGCACCATTATGCATACA---TTTTGTTACCTATGTAGACGATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2720229 180 - 2847728 ATCTAACTACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCGTAGAGACAAACTAGTTGCTGTTTAGGTAAAATAATGCACCATTATGCATACA--TTTTTGTTACCTATGTAGACGATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 848885 180 + 2368649 ATCTAACCACTTCAATTCTGACAGCCCATCATAGAATATTTTAGGTAAGAAC------TACTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGACAAACTAGTTGCTATTTAAGTAAAATAATGTACCATTATGCATACA--TTTTTGTTACCTATGTAGACGATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189593369 178 - 190850796 ATTTAACGACTTCAGTTCTGATAACCCATCATAGAACATTTTAGCTAAG--C------TACTTCATCTAATTCA--TAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGAAAAACGAGTTGCTATTTAAGTAAAATAAGGCACCGTTATGCAAACG--TTTTTGTCACCTATGTAGACACTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072770 178 - 14256875 GTTTAACTACTTCAGTTCTGACAGCCCATCAGAGAATATTTTAGCTAAG--C------TACTTCATCTAATTTA--GAGTCCTTTATATTTTTCTCTG-TTGGAAGCATTTCATAGAGAAAAACTAGTTGTTATTTAAGTAAAATAAGGCACCATTATGCATACG--TTTTTGTCACCTATGTAGACAATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969258 178 - 2196201 ATTTAACTACTTCAGTTCTGATAGCCCGTCATAGACTATTTTAGCTAAG--C------TGCTTCATCTAATTTA--TAGTCCTTTATATTTTTCTCTG-TCGGAAGCATTTCATAGAGAAAAACTAGTTGCTATTTAAGTAAAATAAAGCACCATTACGCATACG--TTTTTGTCACCCATGTAGACAATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362628 178 - 5030052 ATTTAACTACTTCAGTTCTGATAGCCCATCATAGAATATTTTAGCTAAG--C------TACTTCATCTAATTTA--TAGTCCTTTATGTTTTTCTCTG-TTGGAAGCATTTCATAGAGAAAAACCAGTTGCTATTTAAGTAAAATAAGGCACCATTATGCATACT--TCTTTGTCACCTATGTAGACAATG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17484933 180 - 93316391 ATTTGACCACTTCAGTTCTGTTAGCCCATCCTAGGATATTTTAGCCAAAAAC------AACTTAATCTTATTTT--TAGGCTTTTATATTTTCCTCTG-TTGGAAATATTTC--AGAGGCAAACTAGTTGCTACTTAAGTAAAACGATAGACCATTATGCATACATTTTTTTGTTACCTATGTAGACAATA i micMur3.chr14 I 3855 C 0 s proCoq1.NW_012145301v1 3905639 179 + 3993831 ATTTGATCACTTCAGTTTTGTTAGCCCATCATAGGATACTTTAGCCAAAAAT------GACTTAATCTTATTTA--TAGGCTTTTATATTTTCCTCTG-TTGGAAACATTTC--AGAGGCAAACCAGTTGCTACTTAAGTAAAACGATACACCATTACGCATACA-TTTTTTGTTACCTACGTAGACAATA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11212165 187 - 11315646 ATTTAATCACTTCAATTCTGATACCCCGTTGTAAGATATTTTAGCCAAGAACTACTGATACTTAATCACATTTA--TAGGCTTTTATATTTTCCTCTG-TTGAAACCATCTCATAAAGGCGAACTAGATGCTGTTCAAGTGAAATGATACACCATTATGCATACA-TTTTTTGTTACCTATGTAGACAATA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16918258 161 - 59632846 ATTTAACCACTTCAATGCTGATAACCTATCACAGGCTAATGTAGCCAAAAAT------TACATAATCTTATCCATGTAGACTTTTATATTTTCCTTAATTTGAAAATAATTCATAAAGACAAGCTAGTTGATATGTAAAGAAAGTTATATATCCTTATGCATACA--TT---------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1418704 161 - 2520184 ACTTTACCCCTCCAATTCTAATAG---------GGGCACTTTAGCCAGAAAG------TACATATTCTTGTTCA--CAAA-GTTTATATGTTACTCTG-TTGGAAATATTTCATAGAGGCAAACTAGTTGCT-----------ATACTACATCATCATGCATGCACTCTTTTGTTACCTATGTAGACAAAG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86544015 10809 - 129401213 I a score=11863247.000000 s hg38.chr4_KI270789v1_alt 77018 758 + 205944 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACTTATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTCTTTCCCTACTACCTCCCAAAT----AAAGAGTTACCTGCTAGGCGCACATCTATCCCACGAATTTGTCAGCTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAAT--AGAGTATGAAAATTGAAATTAGACACACTTACT-ATAAAATGTGATGATTATTTCCATTCCAGGACCAAATTGAA-T-----------------TAAAAAAAACTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGCAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG--TTTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ACGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCACAACAGAACGCTAACGCGGGTGCTTGATTACAACAAGCCATCCAATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAACGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTCCCT s panTro5.chr4 192868644 758 + 194502333 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACTTATAAATTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTC-TTCCCTACTACCTCCCAAAT----AAAGAGTTACCTGCTAGGCGCACATCTATCCCACGAATTTGTCAGCTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATACAGAGTATGAAAATTGAAATTAGACACACTTACT-ATAAAATGTGATGATTATTTCCATTCCAGGACCAAACTGAA-T-----------------TAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGCAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG---TTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ACGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCACAACAGAACGCTAATGCCAGTGCTTGATTACAACAAGCCATCCAATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCACAGACAAATTATTTGATCAACGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTCCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192752471 758 + 195804263 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACTTATAAATTGTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTC-TTCCCTACTACCTCCCAAAT----AAAGAGTTACCTGCTAGGCGCACATCTATCCCACGAATTTGTCAGCTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATACAGAGTATGAAAATTGAAATTAGACACACTTACT-ATAAAATGTGATGATTATTTCCATTCCAGGACCAAACTGAA-T-----------------TAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGCAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG---TTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ACGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCACAACAGAACGCTAATGCCAGTGCTTGATTACAACAAGCCATCCAATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCACAGACAAATTATTTGATCAACGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTCCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3788917 760 + 4876863 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACTTATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTCTTTCCCTACTACCTTCCAAAT----AAAGAGTTACCTGCTAGGCGCACATCTATCCCACGAATTTGTCAGCTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATACGGAGTATGAAAATTGAAATTAGACACACTTACT-ATAAAATGTGATGATTATTTCCATTCCAGGACCAAATTGAA-T-----------------AAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGCAAGCCAACTTCTGCCCAGTAATGTTCGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG--TTTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCGGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCACAACAGAACGCTAATGCCGGTGCTTGATTACAACAAGCCATCCAATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTCTATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAACGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTCCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112674620 762 + 115148730 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACTTATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAGCACAGTCTTTCCCTACTACCTCCCAAAT----AAAGAGTTACCAGCTAGGTGCACATCTATCCCATGAATTTGTCAGCTCAAAGGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATACAGAGTATGAAAATTGAAATTAGACGCACTTATT-ATAAAATGTGATGATTATTTCCATTCCAGGATCAAATTGAA-T-----------------AAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGCAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAGTTTTTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAAAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACAGAGCACT-------TATTTCATCACAACAGAACGCTAATGCCAGTGCTTGATTACAACAAGCCATCCAATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTCCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188959689 754 + 190429646 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACATGTAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCC----C----AAACAGTTACCTGCTAGGCACACAT-----CTATGAATTTGTCAGCGCAAAGGAACAAGGACAGCAGTTATGCTTGATTATACAGAACAAATGCAGAGTATGAAAATTGAAATTAGACACACTTATT-ATAAAATG---TGATTATTTCCATTCCAGAACCAAATTGAA-T-------------AAAAAAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCTAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAGTAGTCTGTTCATCACAGGTGATAAAG-TTTTTTT-TTTA-------AAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCAGT-------TATTTCATCCCAACAGAGCGCTAATGCCAGTGCTTGATTACAACAAGCCATCCGATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTTTATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCACTAATAAAACTACACTATATTCTC-AGGCCTGTTATATGGGCACAGACAAATTATTTGATCAATGGTATTGAGCAAAAGGAGAAGCACTCATTGTCTCTAATCTCTTTTCCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187907178 757 + 189454096 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACATGTAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCC----C----AAACAGTTACCTGCTAGGCACACAT-----CTATGAATTTGTCAGCGCAAAGGAACAAGGACAGCAGTTATGCTTGATTATGCAGAACAAATGCAGAGTATGAAAATTGAAATTAGACACACTTATT-ATAAAATG---TGATTATTTCCATTCCAGAACCAAATTGAA-TT-----------AAAAAAAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCTAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAGTAGTCTGTTCATCACAGGTGATAAAGTTTTTTTT-TTTA-------AAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCAGT-------TACTTCATCCCAACAGAGCGCTAATGCCAGTGCTTGATTACAACAAGCCATCCGATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCACTAATAAAACTACACTATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGGTATTGAGCAAAAGGAAAAGCACTCATTGTCTCTAATCTCTTTTCCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24289509 755 - 25927173 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACATGTAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCC----C----AAACAGTTACCTGCTAGACACACAT-----CTATGAATTTGTCAGCGCAAAGGAACAAGGACAGCAGTTATGCTTGATTATACAGAACAAATGCAGAGTATGAAAATTGAAATTAGACACACTTATT-ATAAAATG---TGATTATTTCCATTCCAGAACCAAATTGAA-T-------------AAAAAAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTTTGCCTAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAGTAGTCTGTTCATCACAGGTGATAAAGTTTTTTTT-TTTT-------AAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCAGT-------TATTTCATCCCAACAGAGCGCTAATGCCAGTGCTTGATTACAACAAGCCATCCGATTGTATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCACTAATAAAACTACACTATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGATATTGAGCAAAAGGAGAAGCACTCATTGTCTCTAATCTCTTTTCCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3323965 765 + 4669795 AGAAAAAAGAATTGTTTTAAATTCCTAGGGACACAGATAAGTTCTAGGTTGACATTAATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCCCAAAC----AAACAGTTACCTGCTAGGCACACATCTATCCTATGAATTTGTCAGCGCAAAGGAACAAGGACAGCAGTTATGCTTGATTATACAGAACAAATGCAGGGTATGAAAATTGAAATTAGATATACTTATT-ATAAAATGTGATGATTATTTCCATTCCAGAACCAAATTGCA-T-------------TAAAAAAAAAAAACTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG-TTTTTTT-TTTT-------AAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTATGCTTTATATG-CAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACAGAGCACT-------TACTTCATCCCAACAGAACGCTAATGCCAGTGCTTGATTACAACAAGCCATCCGATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCGCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGGTATTGAGCAAAAGGAGAAACACTCATTGTCTCTAATCTCTTTTCCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134283470 765 + 135778131 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACAGATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCC----CAAAAAAACAGTTACCTGCTAGGCACACATCTATCCTATGAATTTGTCAGCACAAAGGAACAAGGACAGCAGTTATGCTTGATTATACAGAACAAATGCAGAGTGTGAAAATTGAAATTAGACACACTTATT-ATAAAATGTGATGATTATTTCCATTCCAGAACCAAATTGAATT---------------AAAAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCTAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAGTAGTCTGTTCATCACAGGTGATAAAG-TTTTTTT-TTTT-------AAGTCAATAAATTGCTTTTTACTACTACAGTAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCCCAACAGAACGCTAATGCCAGTGCTTGATTACAATAAGCCATCCGATTGCGTGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCGCTAATAAAACTACACTATTTTCTC-AGGCCCGTTATATGGGCGCAGACAAATTATTTGATCAATGGTATTGAGCAAAAGGAGAAGCACTCATTGTCTCTAATCTCTTTTCCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2720409 767 - 2847728 AGAAAATAGAATTGTTTTAAATTCCTAGGGACACAGATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTATGTCTAAG--CAGTCTTTCCCTACTACCTCC----C----AAACAGTTACCTGCCAGGCACGCATCTATCCTATGAATTTGTCAGTGCAAAGGAACAAAGACAGCAGTTATGCTTGATTATACAGAATAAATGCAGAGTATGAAAATTGAAATTAGACATACTTATT-ATAAAATGTGATGATTACTTCCATTCCAGAACCAAATTGAA-T---------------AAAAAAAAAACCTTATTGATCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAG-ttttttt-ttttttttttAAAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTATGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTTCATCCTAACAGAACGCTAATGCCAGTGCTTGATTACAACAAGCCATCCGATTGCATGAATTTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCGCTAATAAAACTACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGATATTGAGCAAAAGGAGAAGCACTCATTGTCTCTAATCTCTTTTCCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849065 777 + 2368649 AGAAAAGAGAATTGTTTTAAATTCCTAGGAACACATATAAGTTCTAGGTTGACATTTATCAAATTTTCATTATTTTGTCTAAG--CAGTCTTTCCCTACTACCTCCCAAAC----AAACAGTTACCTGCTAGGCACACATCTATCCTATGAATTTGTCAGCTCAAAGGAACAAGGGCAGCAGTTATGCTTGATTACACAGAATAGATGCAGAGTATGAAAATTGAAATTAGACATACTTATT-ATAAAATGTGATGATTATTTCCATTCCAGAACCAAATTGAA-TTaaaacaaaacaaaacaaaaaaaaaCCTTATTGGTCTGGATTGAATTTCAATTTGCTAAGATTTGAGTAAGCCAACTTCTGCCCAGTAATGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGTTCATCACAGGTGATAAAGTTTTTTTC-CTTT-------AAGTCAATAAATTACTTTTTACTACTACAGGAGAA---------ATGTGTGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCACTTGAGGACTAA-ATTACGGAGCACT-------TATTCCATCCCAACAGAACGCTAATGCCACTGCTTGATTAC---AAGCCATCCGATTGCATGAATGTGGGCTGCAAGGCACCCAGGCTTTTATATTCATTAGCAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACGACACCATTTTCTC-AGGCCTGTTATATGGGCGCAGACAAATTATTTGATCAATGATATTGAGCAAAAGGAGAAACACTCATTGTCTCTAATCTCTTTTCCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189593547 745 - 190850796 AGGAAATAGAATTGTTTTAAATTCCTAGACACAC----AAGTTCTAGGCTGACACTGATCAAATTTGCATTATTA-GTCTAAGCACAGTCTTTCCTCACTGGCTCCCAAAT----AAACAGTTACCTGCTGG---TGTATCTATTCTATGCATTTGTCACCTCAAAGGAACGAGACCAGTAGTTAT--CTGATTATACAGAATAAATGCATAGGATGAAAATTGAAATTAGACATGCTCATT-TAAAGATGTGATGATTCTTTCCATTCCAGGACCAAATCGAA-T----------------AAAAAAAACCCTCATTGATCTGGATTGAATTTCAGTTTGCTAAGGTTTGAACAAGCCAACTTCTGCCCAGTAACGTTTGAATAGAAAGGCTTAGGAG-GCCAATAGTCTGCTCATCACAGGTGATAAAG--GTTTTT-TAAA-------AAGTCAATAAATTACTCTT---TACTACAGGAGAA---------ATGTACGTTTTATGTGCCAACAAAGAGGGGAAATGCCAGAAGCACTTGAAGGCTAA-ATCACAGAGCACT-------TACTT-----CACCAGAAAGCCAGTGCCGGTGCCTGATTACAACAAGCTGTCAGATCGCACGAATTTGGGCTGCAAGGCACCCAGGC-TTTATAGTCATTAGGAAGGTTATTGATTCTGGAAAGTTGCCTCTAATAAAACGACACCATTTTATC-AGGCCTGTTATATAGGCACAGACAAACTATTTGATCAATGATATTGAGCAAAACGAAAAGCATTCGTTGTCTTGAATCTCTTCTACCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13072948 748 - 14256875 AGGAAATACAATTGTTTTAAATTCCTAGGGACAC----AAGTTCTAGGCTGACATTTATCAGATTTTCATGATTA-GTCTAAGCACAGTCTTTCCTCACTACCTCCCAAAT----AAACAGCCACCTGCTAG---TGTGTCTACTCTACGCATTTGTCAGCTCACAGGAACGAGGCCAGCAGTTAT--CTGCTGATACAGAATAAATACATAGGACGGAAACTGAAAGTAGACATGCTCAAC-TAAAAATGTGATGATTCTTTCCATTCCAGGACCAAATCGAA-T-----------------AAAAAAACGCTCATTGATCTGGATTGAATTTCAATTTGCGAAGCTTTGAGGAAGCCAACTTCTGCCCAGTAACGTTTGAATAGAAAAGCTTATGAG-GCCAATAGTCTGCTCATCACAGGTGATAATG--TTTTTTATAAA-------AAGTCAATAAATTACCTTT---TACTACAGGAGAA---------ATGTACGTTTTATATGCCAACAAAGAGTGGAAATGCCAGAAACACTTGAGGGCTAA-ATCACGGAGCACT-------TACCTCATTGCACCAGAACGCTGGTGCCAGTGCCTGATTACAACAAGCCATCCAGTTGCACGGATTTGGGCTGCAAGGCTGGGTGCC-TTTATATTCATTAGGAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTGCACCATTTTATC-AGGTCTGTTATATAGGCACAGACAAATTATTTGATCAATGATATTGAGCAAAACGAAAAGCATTCACTGTCT--AATCTCTTCTTCCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 969436 749 - 2196201 AGGAAATACAATTGTTTTAAATTCCTAGGGACAC----AAGTTCTAGGCTGACATTTATCAGATTTGCATGACTA-GTCTAAGCACAGTGTTTCCTCACTTCCTCCCAAAT----AAACAGCCACCTTCTTG---TGTGTCTGTTCTATGCATTTGTCAGCTCAAAGGAACGAGGCCAGCAGTTAT--CTGCTTACACAGAATAAATACATAGGATGAAAACTGAAATTAGACATGCTCATT-TAAAAACGTGATGATTCTTTCCATTCCAGGACCAAATCGAA-T-----------------AAAAAAACCCTCATTGATCTGGATTGAATTTCGATTTGCTAAGGTTTGAGCAAGGCAGCTTCTGCCCAGTAACGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGCACATCACAGGTGATAACG--TTTTTT-TAAA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATGTACGTTTTATATGCCAACAAAGAGTGGAAATGCCAGAAACACCTGAGGGCTAA-ATCACGGAGCACT-------TACTTCATTGCACCAGAACGCTGGTGCCAGTGCCTGATTACAACAAGCCATCCGGTCGCACGAATTTGGGCTGCAAGGCACCCAGGC-TTTATATTCATTAGGCAGGTTATTGATTCTGGAAAGCTACCTCTAATAAAACTACCCCATTTTATC-AGGACTGTTATATAGGCACAGACAAATTATTTGATCAATGATATTGAGCAAAACGAAAGGCATTCGCTGTCTCCAATCTCTTCTTCCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3362806 740 - 5030052 AGGAAATACAATTGTTTTAAATTCCTAGGGACAC----AAGTTCTAGGCTGACATTTATCAAATTTGCATTATTA-GTCTAAGCACAGTCTTTCCTCACTACTTCCCAAAT----AAACAGTTGCCTGCTTG---TGTATCTATTCTATGCATTTGTCAGCTCAAAGGAATGAGGCCAGCAGTTAT--CTGATTATACAGAATAAATATATAGGATGAAAACTGAAATTAGAC----------TAAAAATGTGATGATTCTTTCCATTCCAGGAGCAAATCGAA-T-----------------AAAAAAACCCTCATTGATCTGGATTGAATTTCAATTTGCTAAGGTTTGAGCAAGCCAACTTCTGCCCAGTAACGTTTGAATAGAAAGGCTTATGAG-GCCAATAGTCTGCTCATCACAGGTGATAAAG--TTTTCT-TAAA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATGTATGTTTTATATGCCAACAAAGAGTGGAAATGCCAGAAACACTTGAGGGCTAA-ATCACGGAGCACT-------TACTTGGTCGCAGCAGAACGCTAGTGCCAGTGCCTGATTACAAGAAGCCATCCAGTTGCACGAATTTGGGCTGCAAGGCACCCAGGC-TTTCTATTCATTAGGAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACCATTTTATC-AGGCCTGTTGTATAGGCACAGACAAATTATTTGATCAATGATATTGAGCAAAACGAAAAGCGTTCACTGTCTCTGATCTCTTCTTCCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17485113 760 - 93316391 AGAAAATATAATTGTTTTGAAGTCCTAGTAATATTTACAAATTCTAGGTTGACATTTATCACGTTTTCATTGTTATGTCTAGGCACAGTCTTTCCCCACTCCCTCCTAAAT----AAATAGTTACCTGCTGGGTACACAGCTGTCTTATGCATTTGTCAACTTAAAGGAACGAGGCCAGCAGTTATGCTAGGTTATGGAGAATAAATACATAGTACGAAAATTGAAATTGGACATGCTTATT-ATAAAATGTGATGATTATTTTCATTCCAGGACCAAATTGAA-T------------------AAAAAAACATTATTGATCTGGATTAAATTCGAGTTTGCTAAGGTTAGAGTAAGCCAACTTCTGTCCAGTAATGTTTGAATAGAAAGGCTTACAAAGGCCAATAGTCTGTTCATCACAGGTGATAACA--TTTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATTTCTGCTTTATATGCCAACAAAGAGTCGAAATGCCAGAAGCACTTGAGGACTAA-ATTACTAAACACT-------TATTTTATCACAACAGAACGTTAAAGCCAGTGCTTGATTATAACAAGCAATCCAGTTGCATGAATTTGGGCTGCAAGGCACTCAGGTTTTTATATTCATTAGAAAAGTTATTGATTCTGGAAAGTTGCCTCTAATAAAACGACACTGTTTTCTC-AGGCCTGTTATATGGGCACAGACAAATTATTTGATCAATGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTTTCCT i micMur3.chr14 C 0 I 4870 s proCoq1.NW_012145301v1 3905818 754 + 3993831 AGAAAATATAATTGTTTTGAAGTCCTAGTAACATTTACAACTTCTAAGTTGACATTTATCACGTTTTCATTATTATGTCTAGGCACAGTCTTTCCCTGCTTCCTCCCAAAT----TAATAGTTACCTGCTGGGTACACATCTGTCTTACACATTTGTCAACTCAAAGGAATGAGACCAGCAGTTATGCTTGGTTATACAGAATAAATACATAGTATGAAAATTGAAATTAGACATGCTTATT-ATAAAATGTGATGATTATTGCCATTCCAGGACCAAATTGAA-T--------------------AAAAACATTATTGATCTGGATTAAATTTGAGTTTGCTAAGGTCAGAGCAAGCTAACTTCTGTCCAGTAATGTTTGAATAGAAAGGCTTACAAA-GCCAATAGTCTGTTCATCACAGGTGATAACA-TTTTTTT-TTTA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATTTCTGCTTTATATGTCAACAAAGAGATGAAATGCCAGAAGCACTTGAGGACTAA-ATTACTAAACACT-------TATTTTATCACAACAGAACGTTAATGCCAGTGCTTGATTATAACAAGCAACCCAGCTGCATGAATTTGGGCTGCAAGGCACTCAGGTTTTTATATTCATTAGAAAAGTTATTGATTCTGGAAAGTTACCTCTAATAAAACTACACTATTTTCTC-AGGGCTGTTACATGGGC----ACAAATTATTTGATCAATGATACTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATTTCTTTCCCCT i proCoq1.NW_012145301v1 C 0 I 2221 s otoGar3.GL873580 11212352 755 - 11315646 A-AAAATATAATTGTTTTCAAGTCCTAAGAACATTTACAAGTTCTAGGCTGACATTTATCAAATTTTCATTATTATGTCTAGGCAAAGTCTTTCCCCA-TACCTCCAAAAT----AAATAGTTACCTGCTAGGTATACATCTATCTTATGTACTTGTCAACTCA---GAACGAGACCAATGGTTATGCTTGATTATATGGAATAAATACACAGTATGAAAATTGAAATTAGACATACTCATT-ATAAAATGTGATAATTGTTTCCATTGCAGGACATAATTGAA-T------------------TAAAAAACATTATCGATCTGGATTGAATTCCAATTTACTAAGGTTAGAGCAAGCTAGCTTCTGTCC----ATATTTGAATAGAAAGGCTTACAAG-GGCAATAGTCTATTCATCACAGGTGATATTA--TTTTTT-TT---------AAGTCAATAAGTTTCTTTT---TATGACACAAAAC---------ATTTCTGTTTTATATGCCAACAAAGAGTTGAAATTCCAGAAGCACTTGGAGGCTAA-ATTACTAAACACTTACCATGTATCTTATCACAACAGAACGTTAATGCCAGTGCTTGATTATAACAAGCAATCTGATTGCATGAATTTGGGCTTCAAGGCACTCAGGTTTTTATATTCATTAGAGAAGTTATTGATTCTTCAAAGTTACCTTTAATAAAACTACACTATTTTCTC-AGGCATATTATATGGGCACAGACAAATTATGTGATCGATGATATTGAGCAAAAGGAAAAGCATTCATTGTCTCTAATCTCTTTACCCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86554824 748 - 129401213 AGATAATATATTTATTCTCTAGTCTTGACAACTGTTATAG--TATAATATGACATATAACATATTTTAGTTAC---ATCTAGG--CATTTGGTCACCTCTGTTTCC----C----AAATAGCTACCCAGTAGTCATCCATCTATTATATGCAATTACCAACTCCAAGGAACAAGGTAAGCATTTATTTTTTATTATACAATATGAATGTATATCAT-AAAACTGAAATTAGCTATGCTTTTTAATGAAATGTAATGATTATTT-CATTCCAGCAACAGACTGAT-G-----------------CTTAAAAAGCCTATTGCTTTGGATTGAACTTCAGTTTGCTAAGG---GAGGGAACTAACTTTTACCCACCAATATTTGATTAGATAGATTGGCAAG-GCCAACAG-CTGCTCATTACAGGTGATAAAA---GTTTT-AAAA-------AAGTCAATAAATTGCTTTT---TACTACAGGAGAATTTTTTTTTTTTTTTACTTTATATGCCAACAAAGAGTTGCAATGCCAGAAGCAGTTGAGGGCTAA-ATTACTAAACACT-------TATTTTATCAGAACAGAATGCTAATGCCAGTGCTTGATTACAATAAGCAATACAATTGCAGGAATTTGGACTCCAAGGCAACCAGACTTTTATATTCATTAGAAAAGTTATTGATTCTGGAAGGTCTCCACTAATAAAACTACACTCTTCTCTC-AGGCCTGTGCTGTGGACACGGGCAGCTTGTCTGATCAATGGTCTCGAGCATAAGAAAAAGCATTCATTGCTTCTAATCTCCTTG---- i mm10.chr8 I 10809 C 0 s canFam3.chr16 16918419 731 - 59632846 ----------ATAATTT--AAGTCTTAGGAATATTTACAAGTTCTAGGTAGACATT-ACTAAATTTTCAATATTATGTTTAGGCACATTCTTTCTCCACCACCTCC----T----ACATAGTTACCTGATAAGTGCACATCTATGCAATGCATTTGTCAACTCAGAAGAACAAGGCCAGCAGTTATGCTTGATTATACAGAATAAATACATAGTGTGAAAATTGAAATTAGACATGCTTATT-ATAAAATGTGATGATTATTTCCATTCCAGGACCAAATGAAA-T-------------------AAAACGCCTTATTGATCTGGATTGAATTTCAATTTGCTAAGGTTGGTGCAAGCCAACTTCTGTCCTGCAATATCTGA-TAGAAAGGCTTGTGAG-GCCAATAGCCTATTCATCACAGGTGATAAAA-----------AA-------AAGTCAATAAATTACTTTT---TACTACAGGAGAA---------ATTTCTGCTTTATATGCCAACAAAGAGTTGAAATGCCAGAAGCAGCTGAAGACTAA-ATTACTAAACACT-------TATTTTATCACATCAGAGCATTAATGCCAGTGCTTGATTACAACAAGCAATCCAATTGCATGAATTTGGACTTCAAGGCACCCGGGCTTTTATATTCATTAGAAAAGTTATTGATTCTGGAAAGTTACCACTAATAAAACTACACTATTTTCTC-AGGCATGTTATATAGGCACAGACAGATTATTTGATCAATGATATTGAGCA-AAGGCAAAGTACTCATTGCCTCTAATCTCTTTTCCCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1418865 695 - 2520184 AGCAAATATAATCATTT-GAAGTATTAGGGACATTTGCAACTTCTAGATGGACATTTATCAAATTTTCATGTTTATGTCTAGGCACAAACTTTCCCCACCAACTC-----T----A---------------GGTACACACCCATGGCATGCAC-TGTCAACTCTCAGGAAGAAGGCCTGCAGTTAT-------TACACAGAGTAATTACACAGCGTGAAAATTGAAATTCGACGTGCTTAGC-TTAAGATGTGATGACTGCTTCCATTCCACGACCAAATAGAA-T-------------------AAAAAGCCTTATCGATCTGGATTGAATTTCAATTAACTAATCTTGAGGTGAGCCAAATTCAGTCCAGTAATATTTGAAAAGAAAGGTTTCTAAG-ACCAACAACTTGTTCATCACA-------------------TTTT-----------------------------TACTACAGGAGAA---------AATTCTGCTTTACATGCCAAGAAAGA-TGGAAATGCCCGAAGCAGTTAAGGACTAAGATTACTAAACATT-------TATTTTATCACAACCGAACGTTAATGCCAATGCTTGATGACAACGAGCAATCCAACTGCATGAACTTGGACTGCACGGCACCAAGGCTTTTATATTCGTTAGAAAAGCTGTTGATTCTGGGAAGTGACCACTAATAAAATGTCACCATTTTCTCAAGACCTGTTACATGGGCACAGGCAGAGTGTTTGATCAATGCTATTGAGCAAAAGGAAAAGCACTCCTTGAGCTTAATCTTTCTTCCCT i dasNov3.JH570353 C 0 C 0 a score=1155781.000000 s hg38.chr4_KI270789v1_alt 77776 113 + 205944 CCTCCCAGAATTGTACATGGCGATCATCAGCAGTATGAAGAGGAGCTGTGGGGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT s panTro5.chr4 192869402 113 + 194502333 CCTCCCAGAATTGTACATGGCGATCATCAGCAGTATGAAGAGGAGCTGTGGGGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTGTATAGCTACATA-AATAT-TTGATAATTAAATCACATTGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753229 113 + 195804263 CCTCCCAGAATTGTACATGGCGATCATCAGCAGTATGAAGAGGAGCTGTGGGGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTGTATAGCTACATA-AATAT-TTGATAATTAAATCACATTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789677 113 + 4876863 CCTCCCAGAGTTGTACCTGGCGATCATCAGCAGTATGAAGAGGAGCTGTGGTGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675382 113 + 115148730 CCTCCCAGAATTGTACATGGCAACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960443 113 + 190429646 CCTCCCTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATctg------atttggtttcatatagctatata-aataa-ttgataattaaatcacattgttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187907935 113 + 189454096 CCTCCCTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATCTA-AATAT-TTGATAATTAAATCACATTGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290264 113 - 25927173 CCTCCTTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATCTA-AATAT-TTGATAATTAAATCACATTGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324730 113 + 4669795 CCTCCCTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284235 113 + 135778131 CCTCCCTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721176 113 - 2847728 CCTCCCTGAATTGTACATGGCGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATATA-AATAT-TTGGTAATTAAATCACATTGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849842 113 + 2368649 CCTCCCTGAATTGTACATGGTGACCAGCAGCAGCATGAAGAGGAGCTGTGGGGCC-------------------------------------------------ACATCTG------ATTTGGTTTCATATAGCTATATA-AATAT-TTGATAATTAAATCACATTGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189594292 111 - 190850796 CTGCCCTGAGTTGAACATGGCTAC---CAGCCGCATGAAGAGGAACCGTGGGGCC-------------------------------------------------AGGTCTG------ATTTGGTTTTATGTAGCTATATATAACAT-TTGATAATTAAATCGCAtttttt i calJac3.chr3 C 0 I 224 s saiBol1.JH378165 13073696 114 - 14256875 CTGCCTTGAGTTGTACATTGCTACCAGCAGCAGCATGAAGAGGAACAGTGGGGCC-------------------------------------------------GGGTATG------ATTTGGTTTTATGTAGCTATATATAACAT-TTGATAATTAAATTGCACTGTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 970185 113 - 2196201 CTGCCCTGAGTTGTGCATTGCCACCAGCAGCAGCATGAAG-GGAATAGTGGGGCC-------------------------------------------------GGGTCTG------ATTGGGTTTTATGTAGCTATATGTAACAT-TTGATAATTAAATTGCattgctt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3363546 116 - 5030052 CTGCCCTGAGTTGTACATTGCTACCAGCAGCGGCGTGAAGAGGAACAGTGGGGCC-------------------------------------------------AGGTCTG----ATATTTGGTCTTATGTAGCTATATATAACAT-TTGATATTTAAATTGCACTGTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11213107 145 - 11315646 CCTTTCTAAATTGTACATTG-------CAACAGCAGGAGGAGTCACAGTGGCTCCATGCAAAGCTA-GCACAGGCAGCTCTG----------TGTACAATAGAAAAGTCTT------ATCTGGCTTCATGTAGCTCCCTATAATTT-TTGATAATTAAATTGACTTGTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86555572 150 - 129401213 --TGTCTAGGCTGTGCATTGCTGTTGTCAGAAGCATGAAGAGTACATGTGGGTCC----TATGCTGTGCATTGTCAGTGTTG-------CCATGAGCAATAGATATGCCAT------CTTGGGTTCTGCATAGCTACTTATAAGAT-TTGTTAATTAAATCACATAGTTT i mm10.chr8 C 0 I 4 s canFam3.chr16 16919150 154 - 59632846 CCCTTTTAAGTTATACATTGGTCTCAGCAGCAGGATGATGAGTAAACATGGACCC---------CGTATAAGCCCAGTGTGGGTCCCCTTTCTGTACAACAGAAAGTACTG------CTTTGGCCTCACACAGCTGTATATGACTT-TTGATAATGAAATTGCATTGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1419560 138 - 2520184 CCCTTCAGACTTGCACGCTG-GACCAGTTGTGGTGCAATGAATAAATGTGGAGGC----CACGGAGCCCAGCGTGAGC--------------------------AGGTCTGTGCACAACGAGGCTTCATGATGCTATCTA-AATTTCTTAATAACAAAACTGCATTGTTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I a score=322743.000000 s hg38.chr4_KI270789v1_alt 77889 35 + 205944 CAATAAGA-ATATT---AAATAAAAGCTAAAGTTAAAAA s panTro5.chr4 192869515 35 + 194502333 CAATAAGA-ATATT---AAAtaaaagctaaagttaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753342 35 + 195804263 CAATAAGA-ATATT---AAAtaaaagctaaagttaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789790 35 + 4876863 CAATAAGA-ATATT---AAAtaaaagctaaagttaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675495 35 + 115148730 Caataaaa-atatt---aaataaaagctaaagttaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960556 35 + 190429646 caataaaa-atatt---aaacaaaagctaaagttgaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908048 35 + 189454096 CAATAAAA-ATATT---AAACAAAAGCTAAAGTTGAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290377 35 - 25927173 CAATAAAA-ATATT---AAACAAAAGCTAAAGTTGAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324843 35 + 4669795 CAATAAAA-ATATT---AAAtaaaagctaaagttaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284348 35 + 135778131 Caataaaa-atatt---aaataaaaactaaagttgaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721289 35 - 2847728 CAATAAAA-ATATT---AAAtaaaagctaaagttaaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849955 35 + 2368649 CAATAAAA-ATATT---AAAtaaaagctaaagttaaaaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13073810 31 - 14256875 TAATAAAA-ATAT-------TAAAAGCCAAAGTGAAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 970298 35 - 2196201 taatacaa-atatt---aaataaaagctaaagtgaaaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3363662 35 - 5030052 TAATAAAA-ATATT---AAATAAAAGCTAAAGTGAAAAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11213252 39 - 11315646 TATTAAAAGATATTAGAAAGTAGAAACTAAACTTAAACA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86555726 27 - 129401213 caatgaag-gagtt---agggaaaggaccaa-------- i mm10.chr8 I 4 C 0 s canFam3.chr16 16919304 34 - 59632846 TGATAAAA-ACATT----AATAAAACCTAAAGTAAAAAA i canFam3.chr16 C 0 I 8681 s dasNov3.JH570353 1419698 24 - 2520184 ----------TGAT---AAATGGAA--TAGAATTAAAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I a score=56020.000000 s hg38.chr4_KI270789v1_alt 77924 6 + 205944 TGACAA s panTro5.chr4 192869550 6 + 194502333 tgacaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753377 6 + 195804263 tgacaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789825 6 + 4876863 tgacaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675530 6 + 115148730 tgacaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960591 6 + 190429646 tgaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908083 6 + 189454096 TGAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290412 6 - 25927173 TGAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324878 6 + 4669795 cgaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284383 6 + 135778131 tgaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721324 6 - 2847728 tgaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849990 6 + 2368649 tgaaaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13073841 6 - 14256875 TGATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 970333 6 - 2196201 tgacaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3363697 6 - 5030052 TGacaa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11213291 6 - 11315646 TGAAAA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1419722 6 - 2520184 TGGCAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555753 0 - 129401213 C a score=10920.000000 s hg38.chr4_KI270789v1_alt 77930 1 + 205944 A s panTro5.chr4 192869556 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753383 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789831 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675536 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960597 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908089 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290418 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324884 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284389 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721330 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849996 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13073847 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 970339 1 - 2196201 a i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3363703 1 - 5030052 a i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11213297 1 - 11315646 A i otoGar3.GL873580 C 0 I 78 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419728 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555753 0 - 129401213 C a score=10920.000000 s hg38.chr4_KI270789v1_alt 77931 1 + 205944 A s panTro5.chr4 192869557 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753384 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789832 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675537 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960598 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908090 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290419 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324885 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284390 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721331 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849997 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13073848 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 970340 1 - 2196201 a i cebCap1.NW_016107886v1 C 0 I 3236 s aotNan1.NW_018492112v1 3363704 1 - 5030052 a i aotNan1.NW_018492112v1 C 0 I 592 s mm10.chr8 86555753 1 - 129401213 a i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419728 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e otoGar3.GL873580 11213298 78 - 11315646 I a score=84650.000000 s hg38.chr4_KI270789v1_alt 77932 15 + 205944 TAggccgggtgtgtt s panTro5.chr4 192869558 15 + 194502333 taggccgggtgtgtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753385 15 + 195804263 taggccgggtgtgtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789833 15 + 4876863 tgggccaggtgtgtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675538 15 + 115148730 taggccgggtgcgtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960599 15 + 190429646 taggccaggtgcatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908091 15 + 189454096 TAggccaggtgcatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290420 15 - 25927173 TAggccaggtgcatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324886 15 + 4669795 taggccaggtgcgtt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284391 15 + 135778131 taggccaggtgcatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721332 15 - 2847728 taggccaggtgcgtt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 849998 15 + 2368649 taggccaggtgcgtt i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86555754 15 - 129401213 gaagctgaacgggtt i mm10.chr8 C 0 I 7109 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419728 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C e otoGar3.GL873580 11213298 78 - 11315646 I a score=578274.000000 s hg38.chr4_KI270789v1_alt 77947 104 + 205944 ggcttacgcctgtaatcccagcactttgggaggccgagatgggtg----------gatcacttgaggtcaggagtttg-agaccagcctgaccaatatggtgaga-ccccatctct s panTro5.chr4 192869573 104 + 194502333 ggcttacgcctgtaatcccagcactttgggaggccgagatgggtg----------gatcacttgaggtcaggagtttg-agaccagcctgaccaatatggtgaga-ccccatctct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753400 104 + 195804263 ggcttacgcctgtaatcccagcactttgggaggccgagatgggtg----------gatcacttgaggtcaggagtttg-agaccagcctgaccaatatggtgaga-ccccatctct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789848 104 + 4876863 ggcttacgcctgtaatcccagcactttgggaggccgagatgggtg----------gatcacttgaggtcaggagtttg-agaccagcctgaccaatatggtgaga-ccccatctct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675553 104 + 115148730 ggcttacgcctgtaatcccagcaatttgggaggccgaggtgggtg----------gatcacttgaggtcaggagtttg-agaccagcctgaccaacatggtgaga-ccccatctct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960614 115 + 190429646 gactcacacctgtaatcccagcactttggcaggctgaggtgggtggatcagttgagatcacttgagatcaggagtttg-agaccagcctgaccaacatggtgagacccccatctct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908106 115 + 189454096 gactcacacctgtaatcccagcactttggcaggctgaggtgggtggatcacttgagatcacttgagatcaggagtttg-agaccagcctgaccaacatggtgagacccccatctct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290435 115 - 25927173 gactcacacctgtaatcccagcactttggcaggctgaggtgggtggatcacttgagatcacttgagatcaggagtttg-agaccagcctgaccaacatggtaagacccccatctct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3324901 116 + 4669795 gactcacacctgtaatcccagcactttggcaggctgaggtgggtgggtcacttgaggtcacttgagatcaggagtttgtagaccagcctgaccaacatggtgagacccccatctct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284406 105 + 135778131 gactcacacctgtaatcccagcactttggcaggctgaggtgggtg----------gatcacttgagatcaggagtttg-agaccagcctgaccaacatggtgagacccccatctct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721347 105 - 2847728 gactcacacctgtaatcccagcactttggcaggctgaggtgggtg----------ggtcacttgagatcaggagtttg-agaccagcctgaccaacatggtgagacccccatctct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 850013 115 + 2368649 ggctcacacctgtaatcccagcactttggcaggctgaggtgggtggatcacttgagatcacttgagatcaggagtttg-agaccagtctgaccaacatggtgagacccccatctct i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419728 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C e otoGar3.GL873580 11213298 78 - 11315646 I a score=13326.000000 s hg38.chr4_KI270789v1_alt 78051 2 + 205944 ac s panTro5.chr4 192869677 2 + 194502333 ac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753504 2 + 195804263 ac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789952 2 + 4876863 ac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675657 2 + 115148730 ac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960729 2 + 190429646 ac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908221 2 + 189454096 ac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290550 2 - 25927173 ac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325017 2 + 4669795 ac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284511 2 + 135778131 ac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721452 2 - 2847728 ac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 850128 2 + 2368649 ac i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11213376 2 - 11315646 AT i otoGar3.GL873580 I 78 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419728 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C a score=36900.000000 s hg38.chr4_KI270789v1_alt 78053 5 + 205944 taaaa s panTro5.chr4 192869679 5 + 194502333 taaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753506 5 + 195804263 taaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789954 5 + 4876863 taaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675659 5 + 115148730 taaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960731 5 + 190429646 taaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908223 5 + 189454096 taaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290552 5 - 25927173 taaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325019 5 + 4669795 taaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284513 5 + 135778131 taaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721454 5 - 2847728 taaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 850130 5 + 2368649 taaga i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11213378 5 - 11315646 CAAGA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1419728 5 - 2520184 TAAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C a score=906748.000000 s hg38.chr4_KI270789v1_alt 78058 176 + 205944 aatacaaaagttattcgggcatggtggcaggcatc---tgtaatcctggctacttggg--aggctgaggcaggagaatcacttgaacccaggaggttgaggttgtagtgagcctagac-tgcaccattgcacttcagcctggtcaataaaagcaaaactccatctc------------aaaaaaaaTGACAAAA s panTro5.chr4 192869684 177 + 194502333 aatacaaaagttattcgggcatggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcacttgaacccaggaggctgaggttgcagtgagcctagac-tgcaccattgcacttcagcctggtcaataaaagcaaaactccatctc-----------aaaaaaaaaagacaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753511 177 + 195804263 aatacaaaagttattcgggcatggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcacttgaacccaggaggctgaggttgcagtgagcctagac-tgcaccattgcacttcagcctggtcaataaaagcaaaactccatctc-----------aaaaaaaaaaagcaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3789959 178 + 4876863 aatacaaaagttattcgggcacggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcacttgaacccaggaggctgaggtttcagtgagcctagac-tgcaccatggcacttcagcctggtcaataaaagcaaaactccatctc----------aaaaaaaaaaagacaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675664 176 + 115148730 aatacaaaagttattcgggcgtggttgcaggcgcc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttaagcccgggaggttgaggttgcagtgagcctagac-tgcaccattgcacttcagcctggtcaacaaaagcgaaactccatctc------------aaaaaaaaagacaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960736 175 + 190429646 aatacaaaagt-----------ggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttgaacccgggaggttgaggttgcagtgagcctggac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcatt--aaaaaaaaaaaaaaaagacaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908228 177 + 189454096 aatacaaaagt-----------ggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttgaacccgggaggttgaggttgcagtgagcctagac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcattaaaaaaaaaaaaaaaaaagacaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290557 177 - 25927173 aatacaaaagt-----------ggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttgaacccgggaggttgaggttgcagtgagcctagac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcattaaaaaaaaaaaaaaaaaagacaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325024 172 + 4669795 aatacaaaagt-----------cgtggcaggcacc---tgtaatcctggctgcttggg--aggctgaggcaggagaatcgcttgaacccgggaggttgaggttgcagtgagcctagac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcatt-----taaaaaaaaaaaagacaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284518 175 + 135778131 aatacaaaagt-----------ggtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttgaacccgggagattgaggttgcagtgagcttagac-tgcaacattgcacttcagcctgggcaacaaaagcaaaactccatctcatt--aaaaaaaaaaaaaaaaggcaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721459 170 - 2847728 aatacaaaagt-----------cgtggcaggcacc---tgtaatcctggctacttggg--aggctgaggcaggagaatcgcttgaacctgggaggttgaggttgcagtgagcctagac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcat-------aaaaaaaaaaaagacaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 850135 170 + 2368649 aatacaaaagt-----------ggtggcaggcacc---tgtaatcctggctacttggg--aggctgacgcaggagaatcgcttgaacccgggaagttgaggttgcagtgagcctagac-tgcaacattgcacttcagcctggtcaacaaaagcaaaactccatctcat-------aaaaaaaaaaaagacaaaa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11213383 146 - 11315646 AATGTAAAATCTG---------TGTGGAAGGCAACAAATGAAGCCCTCCCAACACCGATTAAGATGAAACCTGCACGGC----GAATCAGGAAAGATGCTGCGGCTGTGTTTCTTGAAGTGAAATAATGGATTGTAACACAGTCTAT----------CTCAATCTC------------AAA------------- i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1419733 0 - 2520184 C e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C a score=6006.000000 s hg38.chr4_KI270789v1_alt 78234 1 + 205944 T s panTro5.chr4 192869861 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753688 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790137 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675840 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960911 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908405 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290734 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325196 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284693 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 850305 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1419733 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e saiBol1.JH378165 13073849 0 - 14256875 C e manLeu1.NW_012102221v1 2721629 0 - 2847728 C e otoGar3.GL873580 11213529 0 - 11315646 C a score=804020.000000 s hg38.chr4_KI270789v1_alt 78235 123 + 205944 AGTATAATATTATATTCATAAAAATAATTTTACATTTACACAAAGGTGTAATTC---AC---TGTACATTAGCTTCAACAAAA-CATCCATAAGTTATTCAATTCCCAGTTATCGGCTGCTTGAACTTTT s panTro5.chr4 192869862 123 + 194502333 agtataatattatattcataaaaataattttacatttacacaaaggtgtaattc---ac---tgtacattagcttcaacaaaa-catccgtaagttattcaattcccagttatcggctgcttgaactttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753689 123 + 195804263 agtataatattatattcataaaaataattttacatttacacaaaggtgtaattc---ac---tgtacattagcttcaacaaaa-catccgtaagttattcaattcccagttatcggctgcttgaactttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790138 123 + 4876863 agtataatattatattcataaaaatacttttacatttacacaaaggtgtaattc---ac---tgtacattagcttcaacaaaa-catccataagttattcagttcccagttatcggctgcttgaactttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675841 121 + 115148730 agtataatattatattcataaaaataaTTTTACATTTACACAAAG--GTAATTC---AC---TGTACATTAGCTTCAGCAAAA-CATCCATAAGTTATTCAATTTCCAGTTACTGGCTGCTTGAACTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188960912 124 + 190429646 agtataacattatattcataaaaataattttacatgtacacaaagatgtaattt---ac---tgtgcattagcttcaacaaaagcatccataagttactcaatttccagttattggctgcttgaactttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908406 124 + 189454096 AGTATAATATTATATTCATAAAAATAATTTTACATGTACACAAAGATGTAATTT---AC---TGTGCATTAGCTTCAACAAAAGCATCCATAAGTTACTCAATTTCCAGTTATTGGCTGCTTGAACTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290735 122 - 25927173 AGTATTATATTATATTCATAAAAATAATTTTACATGT--ACAAAGATGTAATTT---AC---TGTGCAttagcttcaacaaaagcatccataagttactcaatttccagttattggctgcttgaactttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325197 121 + 4669795 agtataa---tatattcataaaaataattttacatttacacaaagatgtaattt---ac---tgtacattagcttcagcaaaagcatccataagttattcaatttccagttactggctgcttgaactttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284694 124 + 135778131 agtataatattatattcataaaaataaTTTTACATGTACACAAAGATGTAATTT---AC---TGTACATTAGCTTCAACAAAAGCATCCATATGTTACTCAATTTCCAGTTATTGGCTGCTTGAACTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721629 122 - 2847728 --tataatattatattcatagaaataattttacatttacacaaagatgtaattt---ac---tgtacattagcttcaacaaaagcatccataagttactcaatttccagttattggctgcttgaactttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 850306 124 + 2368649 agtataatattatattcataaaaataattttacatttacacaaagatgtaattt---ac---tgtacattagcttcagcaaaagcatccataagttactcaatttccagttatcggctgcttgaactttt i colAng1.NW_012116221v1 C 0 M 1381 s saiBol1.JH378165 13073849 118 - 14256875 AGTAT---ATTATATTCATAAAAATAACTTGACATTTACACAAAGTGGTGATTC---AT---TGTATACAGGCTTCAGCCAAAGCACCCAGATGTTATTCAACTTCCAGTTATCACCTGCCTGAACT--- i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11213529 67 - 11315646 -------------------------ACTTTTGTGGTGACGCACA----TAATTC---ACTGATGTACATCAGCTTCAGCAAAATGACGCAGAAGTTACT------------------------------- i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1419734 127 - 2520184 AATATAACATTATGTTAATGGAAAGAATTTTAAATTTGAGCACGTGCACAATTCTTTGT---TGTGATTTGGCTTTAACAAAATCATCCAAAGGTTATGCAATGTTCAGTTATCAGCTGCTTGAACTGCT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I a score=270115.000000 s hg38.chr4_KI270789v1_alt 78358 52 + 205944 ATGCCCTTTAGCTCCAT-CTGTTAAAGAACGCATACCTCCATAGAGCTCCCAT s panTro5.chr4 192869985 52 + 194502333 atgctctttagctctat-ctgttaaagaacgcatacctccatagagctcccat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753812 52 + 195804263 atgctctttagctctat-ctgttaaagaacgcatacctccatagagctcccat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790261 52 + 4876863 atgccctttagctctat-ctgttaaagaacgcatacctccatagagctcccat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112675962 52 + 115148730 ATGCTCTTTAGCTCTAT-CTGTTAAAGAACGTATACCTCCATAGAGCTTCCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961036 52 + 190429646 atgcccttttgctctat-ctgttaaagaacatatacctccatagagcttccgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908530 52 + 189454096 ATGCCCTTTTGCTCTAT-CTGTTAAAGAACGTATACCTCCATAGAGCTTCCGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290857 52 - 25927173 atgcccttttgctctat-ctgttaaagaacgtatacctccatagagcttccgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325318 52 + 4669795 atgcccttttgctctat-ctgttgaagaacgtatatctccatagagcttctgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284818 52 + 135778131 ATGCCCTTTTGCTCTAT-CTGTTAAAGAATGTATACCTCCATAGAGCTTCCGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721751 52 - 2847728 atgcccttttgctctat-ctgttaaagaacgtatacctccatagagcttccgt i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13073967 31 - 14256875 --------------------GTTAAAGACCG--TAGCCCCAAAGAATTTCCAT i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11213596 37 - 11315646 ----------GTTTTGT-CTGTTAAAGTAAGT-----TCTGCAGAGTTTCTAT i otoGar3.GL873580 C 0 I 5 s dasNov3.JH570353 1419861 51 - 2520184 ATGCAAATCAGTGCTTCACTGTTAAAGGATG--TTGCTCCATGGAGTTTCTAT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e canFam3.chr16 16919338 8681 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M a score=2181205.000000 s hg38.chr4_KI270789v1_alt 78410 307 + 205944 AAAATAGTTTTTAATTAA-T-TT-AATCAAAGAATATTGT-TCCAAGAATATAGTTAATACACTGAATGGAATTTTTATAAATAAAATTAATAAAGATGGAAATGT--GTTACTT---------------AAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattgcattaatttggggaaaattaatat-t-taaaaatagtgagttttccaatccaatca-caaag-tataccttac----------------------cattta s panTro5.chr4 192870037 307 + 194502333 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tccaagaatatagttaatacactgaatggaatttttataaataaaattaataaagaTGGAAATGT--GTTACTT---------------AAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaagttccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttggggaaaattaatat-t-taaaaatagtgagttttccaatccaatca-caaag-tataccttac----------------------cattta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192753864 307 + 195804263 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tccaagaatatagttaatacactgaatggaatttttataaataaaattaataaagaTGGAAATGT--GTTACTT---------------AAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaagttccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttggggaaaattaatat-t-taaaaatagtgagttttccaatccaatca-caaag-tataccttac----------------------cattta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790313 307 + 4876863 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tccaagaatatagttaatacactgaatggaatttttataaataaaattaataaagaTGGAAATGT--GTTACTT---------------AAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttggggaaaattaatat-t-taaaaatagtgagttttccaatccaatca-caaag-tataccttac----------------------cattta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676014 308 + 115148730 AAAATAGTTTTTAATTAA-T-TT-AATCAAAGAATATTGT-TCCAAGAATATAGTTAATACACTGAATGGAATTTTTATAAATGAAATTAATAAAGATGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatgtggggaaaattaatat-t-taaaaatattgagttttccaatccaatca-caaag-tagacctcac----------------------cattta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961088 309 + 190429646 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tcaaagaatatagttaatacactgaatggaatttttataagtaaaattaataaagaTGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagctattctatcattgtttgtgtttctattt-aaatattagaatcaccttgccacattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttgtggaaaattaatat-t-taaaaatattgagttttccaacccaatca-caaaggtatacttcac----------------------aattta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908582 309 + 189454096 AAAATAGTTTTTAATTAA-T-TT-AATCAAAGAATATTGT-TCAAAGAATATAGTTAATACACTGAATGGAATTTTTATAAGTAAAATTAATAAAGATGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagctattctatcattgtttgtgtttctattt-aaatattagaatcaccttgccacattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttgtggaaaattaatat-t-taaaaatattgagttttccaacccaatca-caaaggtatacttcac----------------------aattta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24290909 309 - 25927173 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tcaaagaatatagttaatacactgaatggaatttttataagtaaaattaataaagaTGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagctattctatcattgtttgtgtttctattt-aaatattagaatcaccttgccacattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttgtggaaaattaatat-t-taaaaatattgagttttccaacccaatca-caaaggtatacttcac----------------------aattta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325370 309 + 4669795 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tcaaagaatatagttaatacactgaatggaatttttataagtaaaattaataaagaTGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagctattctatcattgtttgtgtttccattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattatattaatttggggaaaattaatat-t-taaaaatattgagttttccaacccaatca-caaaggtatacctcac----------------------aattta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134284870 309 + 135778131 AAAATAGTTTTTAATTAA-T-TT-AATCAAAGAATATTGT-TCAAAGAATACAGTTAATACACTGAATGGAATTTTTATAAGTAAAATTAATAAAGATGGAAATCT--GTTACTT--------------AAAAAAA-----TAAGATTCtagctattctatcattgtttgtgtttctattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttgtggaaaattaatat-t-taaaaatactgagttttccaacccaatca-caaaggcagacctcac----------------------cattta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2721803 309 - 2847728 aaaatagtttttaattaa-t-tt-aatcaaagaatattgt-tcaaagaatatagttaatacactgaatggaatttttataagtaaaattaataaagaTGGAAATCT--GTTACTT--------------AAAAAAA-----Taagattctagttattctatcattgtttgtgtttctattt-aaatattagaatcaccttgccaaattccacac----aaaaatcctgctgatattttgattggaattgcattgaatctattacattaatttgtggacaattaatat-t-taaaaataatgagttttccaacccaatca-caaagatatacctcac----------------------cattta i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13073998 330 - 14256875 AAAATAGCTTTAAATTAA-T-TT-AATCAAAGAATGTTG--TCAAAGAATATAGTTAATACACTGAAGGAAATTTTTATGAATAAAATTAATAAAGATGGAAATTT--GTTACCT--------------CAAAAAC-----caagattctagctattgtattgttgtttgtgtttccattt-aaatatcagaatcaccttgccaaattccacac----aaaaatcctgctggtattttgattggaattgcactgactctattacattaatttggggaaagttaatat-t-taaaaatattgagttttccaatccaagca-caaaggtctacctcaccTGCTAGTGTATCTGTTCTATGCATTTG i saiBol1.JH378165 C 0 I 91 s otoGar3.GL873580 11213638 301 - 11315646 AAAGCAGTTTTTGATTAATT-TT-ATTCAAAGAATACTGT-TCAAAGAATAT---------ATTGAAGGGAATTTTCataaa-aatatcaattaaaatataaatc----ttagtt--------------aaaaaaataaattaagattatagctattttattg----ttgtgtttcctttt-aaatcttagactcaatgtgccagtttccacacacaaaaaaatccttctggtattttgactggcattacattgaatttattacattaacttgaagaaaattaatac-t-taaaaatactgagttttccatttcaa-aa-caagg-tacacctcac----------------------cactta i otoGar3.GL873580 I 5 I 1 s canFam3.chr16 16928019 302 - 59632846 aAAAAGATTTTAAATTAA-TATT-GATGGAAGGATAGTATATCACAGTAGAT---------------TGGAATTCTCATAAAGAAAATTAATCAATATGGAAATCTTAGCTACTTTT---TGTATGTTTTAGAAaa-----tatggttttaactattctat---ggttttcatttttatttaaaatattataatcaccatgccaatttccat------agaaatcctgctaa---tttaattggaattgc-ttgaaccta-tagatcaatttgagtaaaaataatat-cataaaaatattgaattttcaaaaacaatgagcaaggtcatacctcac----------------------cattta i canFam3.chr16 I 8681 C 0 s dasNov3.JH570353 1419912 310 - 2520184 AAAACAGTTTTTAATTAA-T-TTCAGTAAAAAATTATTGC-TCC------ACAGTCAGTATACTGAGGAGAATTTTCATAAATAAAATTAGTC---ATGGAAATCT----TACTTTCAAACTTTCTTTAAATAAAG-----Taagattttagcaattctgtggttctttgcatttccatgt-aaaccttaggatcaccttgccaatttcca-------caaactcctgctggcattttgactggaattagattgaatcta-taaatcaattttggaaaaattagcatct-taaaattattgagttttccagttcatgag-catgggtgcatcttgt----------------------cattta i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3363705 592 - 5030052 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M a score=582056.000000 s hg38.chr4_KI270789v1_alt 78717 75 + 205944 t-tagaaattt-aattt-tctcagcaatgttt--tagttttcagtgtggaca-ttttccacctattttcttaaatttatct s panTro5.chr4 192870344 75 + 194502333 t-tagaaattt-aattt-tctcagcaatgttt--tagttttcagtgtggaca-ttttccacctattttcttaaatttatct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754171 75 + 195804263 t-tagaaattt-aattt-tctcagcaatgttt--tagttttcagtgtggaca-ttttccacctattttcttaaatttatct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790620 75 + 4876863 t-tagaaattt-aattt-tctcagcaatgttt--tagttttcagtgtggaca-ttttccacctattttcttaaatttatct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676322 76 + 115148730 t-tagaaattt-aattt-tctcagcaatgttt-gtagttttcagtgtggaca-ttttccacctattttcttaaatttacct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961397 77 + 190429646 tgtagaaattt-aattt-tctcagcgatgttt-gtagttttcaatatggaca-ttttccacctattttcttaaatttatct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187908891 77 + 189454096 tgtagaaattt-aattt-tctcagcgatgttt-gtagttttcaatatggaca-ttttccacctattttcttaaatttatct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24291218 77 - 25927173 tgtagaaattt-aattt-tctcagcgatgttt-gtagttttcaatatggaca-ttttccacctattttcttaaatttatct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3325679 77 + 4669795 tgtagaaattt-aattt-tctcagcaatgttt-gtagttttcagtatggaca-ttttccacctattttcttaaatttatct i cerAty1.NW_012001672v1 C 0 I 312 s chlSab2.chr7 134285179 77 + 135778131 tgtagaaattt-aattt-tctcagcgatgttt-gtagttttcagtatggaca-ttttccacctattttcttaaatttatct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2722112 77 - 2847728 tgtagaaattt-aattt-tctcagcaatgttt-gtagttttcagtatggaca-ttttccacctattttcttaaatttgtct i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13074419 76 - 14256875 -ttagaaattt-aattt-tctcagcaatgttg-gcagttttcagtatggaca-ttttccacatatttcctaaattttatct i saiBol1.JH378165 I 91 C 0 s aotNan1.NW_018492112v1 3364297 76 - 5030052 -TTAGAAATTT-AATTT-TCTAAGCAACATTT-GCAGTTTTCAGTATGGACA-TTTTCCACATATTTCCTTAATTTTATCT i aotNan1.NW_018492112v1 I 592 C 0 s otoGar3.GL873580 11213940 77 - 11315646 -ttagaacttt-aatttctcttaccaatattt-gtagttttcagtatggata-tttttcatatattttatcaaatttatct i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16928321 80 - 59632846 tttagaactttaaattc-tctcaacaatatttaaaagtttccactgtggaagctttcccacatcttttgttgaatttttcc i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1420222 68 - 2520184 tttagaatctt-tatttcttttatcaatgttacatagattttagtgtggctg------------ttcaattaaatttatcc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M a score=125752.000000 s hg38.chr4_KI270789v1_alt 78792 20 + 205944 ctaaatatgacatattcttt s panTro5.chr4 192870419 19 + 194502333 ctaaatatgacata-tcttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754246 20 + 195804263 ctaaatatgacatattcttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790695 20 + 4876863 ctaaatatgacatattcttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676398 20 + 115148730 ctaaatatgacatattcttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961474 20 + 190429646 ctaaatatGACATAttcttt i rheMac8.chr5 C 0 I 313 s macFas5.chr5 187908968 20 + 189454096 ctaaatatgacatattcttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24291295 20 - 25927173 ctaaatatgacatattcttt i macNem1.NW_012013133v1 C 0 I 290 s cerAty1.NW_012001672v1 3326068 20 + 4669795 CTAAATATGACATATTCTTG i cerAty1.NW_012001672v1 I 312 C 0 s chlSab2.chr7 134285256 20 + 135778131 ctaaatatGACATAttcttt i chlSab2.chr7 C 0 I 307 s manLeu1.NW_012102221v1 2722189 20 - 2847728 ctaaatatGACATAttcttt i manLeu1.NW_012102221v1 C 0 I 301 s saiBol1.JH378165 13074495 16 - 14256875 c----taTGACATATTCTTG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3364373 20 - 5030052 CTAAATATGACATATTCTTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11214017 20 - 11315646 gtcaatatcatatatttttg i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16928401 17 - 59632846 ataaatataa-atattta-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1420290 14 - 2520184 ctatatattGCATT------ i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M a score=41147.000000 s hg38.chr4_KI270789v1_alt 78812 8 + 205944 atg-ttctt s panTro5.chr4 192870438 8 + 194502333 atg-ttctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754266 8 + 195804263 atg-ttctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790715 8 + 4876863 atg-ttctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676418 8 + 115148730 atg-ttctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961807 8 + 190429646 ATG-TTCTT i rheMac8.chr5 I 313 C 0 s macFas5.chr5 187908988 7 + 189454096 -TT-TTTTT i macFas5.chr5 C 0 I 2862 s macNem1.NW_012013133v1 24291605 8 - 25927173 ATG-TTCTT i macNem1.NW_012013133v1 I 290 C 0 s cerAty1.NW_012001672v1 3326088 8 + 4669795 ATA-TTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134285583 8 + 135778131 ATG-TTCTT i chlSab2.chr7 I 307 C 0 s manLeu1.NW_012102221v1 2722510 8 - 2847728 ATG-TTCTT i manLeu1.NW_012102221v1 I 301 C 0 s saiBol1.JH378165 13074511 7 - 14256875 --ACTTTTT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3364393 6 - 5030052 --A-TTTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11214037 5 - 11315646 gtg-tt--- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16928418 8 - 59632846 atg-ctctt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1420304 8 - 2520184 ATT-TTATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M a score=108469.000000 s hg38.chr4_KI270789v1_alt 78820 22 + 205944 ataTAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA s panTro5.chr4 192870446 22 + 194502333 ataTAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754274 22 + 195804263 ataTAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790723 22 + 4876863 ataTAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676426 22 + 115148730 atgtaa---atAT------TTAAAGTT-----------------------------------------------------------------------------CACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961815 22 + 190429646 ACATAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24291613 22 - 25927173 ACATAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326096 22 + 4669795 ATATAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134285591 22 + 135778131 ACATAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2722518 22 - 2847728 ATATAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CATA i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13074518 22 - 14256875 ATAGAA---ATAT------TTAAAGTT-----------------------------------------------------------------------------CATG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3364399 22 - 5030052 ATATAA---ACAT------TTAAAGTT-----------------------------------------------------------------------------CATA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11214042 28 - 11315646 atataa---atATTGATAGTTGATGTT-----------------------------------------------------------------------------CATA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16928426 102 - 59632846 gtataaggtatgt------ttaaaatttttagttttaattatttgttgctcatatataaatgaaaatgatttttgaacattggtaacgtgtcctgcaatcttgctaca i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1420312 22 - 2520184 ATTAGA---GAAT------TGTGAGTT-----------------------------------------------------------------------------TATA i dasNov3.JH570353 C 0 I 2169 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I a score=3044731.000000 s hg38.chr4_KI270789v1_alt 78842 516 + 205944 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaactgggagacattatttgtaaaatatatgtctgacaaagaacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatataaagaaaaattgcaaatatggaaaagattgagatacat--ttgaaaatagaaaatacatgacccacaagcagattaaaagctgctcaacaccatcagttatcaggaaaatgcaaattaaaatcacagca--------------atttatccattcacac-actaaaatgattacaatttaaaacccaatagtaataagatttggcaaa--aatatggggcaacaaaacttctcatata-ctgctgaacagctttataaaacggtgcgaccacttaggagaattgtttggc-agtttcttaggcttagatatttgtgccaaagaattgaaacct-ggttcacaaaaatacttgcctagaaatggtcacagcagcttgattcatcatagccccagaagagagacaacccaaatgtccatcacatc s panTro5.chr4 192870468 516 + 194502333 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaactgggagacattatttgtaaaatatatgtctgacaaagaacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatataaagaaaaattgcaaatatggaaaagattgagatacat--ttgaaaatagaagatacatgacccacaagcagattaaaagctgctcaacaccatcagttatcaggaaaatgcaaattaaaagcacagca--------------atttatccattcacac-actaaaatgattacaatttaaaacccaatagtaataagatttggcaaa--aatatggggcaacaaaacttctcatata-ctgctgaacaggtttataaaacggtgcaaccacttaggagaattgtttggc-agtttctcaggcttagatatttgtcccaaagaattgaaacat-ggttcacaaaaatacctgcctagaaatggtcacagcagcttgattcaccatagccccaaaagagaggcaacccaaatgtccatcacatc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754296 516 + 195804263 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaactgggagacattatttgtaaaatatatgtctgacaaagaacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatataaagaaaaattgcaaatatggaaaagattgagatacat--ttgaaaatagaagatacatgacccacaagcagattaaaagctgctcaacaccatcagttatcaggaaaatgcaaattaaaagcacagca--------------atttatccattcacac-actaaaatgattacaatttaaaacccaatagtaataagatttggcaaa--aatatggggcaacaaaacttctcatata-ctgctgaacaggtttataaaacggtgcaaccacttaggagaattgtttggc-agtttctcaggcttagatatttgtcccaaagaattgaaacat-ggttcacaaaaatacctgcctagaaatggtcacagcagcttgattcaccatagccccaaaagagaggcaacccaaatgtccatcacatc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3790745 516 + 4876863 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaatcaccaactgggagacattatttgtaaaatatatgtctgacaaagaacttgtatccaaaaagtaaaaataatttttgcaatta---------------------aataataa---caatataaagaaaaattgcaaatatggaaaagattgagatacat--ttgaaaacagaagatacacgacccacaagcagattaaaagctgctcaacaccatcagttatcaggaaaatgcaaattaaaatcacagca--------------atttatccattcacac-actaaaatgattacaatttaaaacccaatagtaataagatttggcaaa--aatatggggaaacaaaacttctcatata-ctgctgaacaggtttataaaacggtgcaatcacttaggagaattgtttggc-agtttctcaggcttagatatttgtcccaaagaattgaaacat-ggttcacaaaaatacttgcctagaaatggtcacagcagcttgattcatcatagccccaaaagagagacaacccaaatgtccatcacatc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676448 516 + 115148730 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcagaccaccaactgggagacattatttgtaaaacatatgtttgacaaagaacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatataaagaaaaattgcaaatatggaaaagattgagatacat--ttgaaaatagaagatacatgacccacaagcagattaaaagctgctcaacaccatcagttatcaggaaaatgcaaattaaaatcacagca--------------atttatccattcacac-actaaaatgattacaatttaaaacccaatagtaataagatttggcaaa--aatatggggcaacaaaacttctcatata-ccactgaacaggtttataaaacggtgcaaccacttaggagaattgtttggc-agtttctcaggcttagatatttgtccc-aagaattgaaacacaggttcacaaaaatacttgcctagaaatggtcacagcaggttgattcatcatagccccaaaagagagacaacccaaatgtccatgaaatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188961837 502 + 190429646 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaa-tgggagatattatttgtaaaacatatgtctgacaaagaacttgtatccaaaaagtataaataacttttacaatta---------------------aataataa---caatataaagaaaaattacaaatatggaaaagattgagatacat--ttgacaatagaagatttatgacccacaagcagatta----------aacatcatcagttatcaggaaaatgaaaattaaaat--cagca--------------atttatccattcacac-actaaaataattacaatttaaaacccaatagtaataagatttggcaaa--aatatgggacagcaaaacttctcatatg-ctgctgaccaggtttataaaacggtgcagccacttaggagaattgtttggc-ggtttctcaggcttcgatatttgtcccaaagaattgaaacacaggttcacaaaaatacttgcttagaaatggtcacagcagcttgattcatcatagccccaaa--ggagacaatccaaatgtccatcaaatc i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24291635 504 - 25927173 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaa-tgggagatattatttgtaaaacatatgtctgacaaagaacttgtatccaaaaagtataaataacttttacaatta---------------------aataataa---caatataaagaaaaattacaaatatggaaaagattgagatacat--ttgacaatagaagatttatgacccacaagcagatta----------aacatcatcagttatcaggaaaatgaaaattaaaatcacagca--------------atttatccattcacac-actaaaataattacaatttaaaacccaatagtaataagatttggcaaa--aatatgggacagcaaaacttctcatatg-ctgctgaccaggtttataaaacggtgcagccacttaggagaattgtttggc-ggtttctcaggcttcgatatttgtcccaaagaattgaaacacaggttcacaaaaatacttgcttagaaatggtcacagcagcttgattcatcatagccccaaa--ggagacaatccaaatgtccatcaaatc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326118 506 + 4669795 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaa-tgggagatattatttgtaaaacatatatctgacaaagaacttgtatccaaaaagtataaataacttttgcaatta---------------------aataataa---caatataaagaaaaattacaaatatggaaaagattgagatacat--ttgacaatagaagatttatgacccacaagcagatta----------aacatcatcagttatcaggaaaatgaaaattaaaatcacagca--------------atttatccattcacac-actaaaataattacaatttaaaacccaatagtaataaaatttggcaaa--aatatgggacagcaaaacttctcatata-ctgctgaccaggtttataaaacggtgcaaccacttaggagaattgtttggc-agtttctcaggcttcgatatttgtcccaaagaattgaaacacgggttcacaaaaatacttgcctagaaatggtcacaggagcttgattcatcatagccccaaatgagagacaatccaaatgtccatcaaatc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134285613 503 + 135778131 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaa-tgggagatattatttgtaaaacatatgtctgacaaagaacttgtatccaaaaagtataaataacttttgcaatta---------------------aataat------aatataaagaaaaattacaaatatggaaaagattgagatacat--ttgacaatagaagatttatgacccacaagcagatta----------aacatcatcagttatcaggaaaatgaaaattaaaatcacagca--------------atttatccattcacac-actaaaataattacaatttaaaacccaatagtaataagatttggcaaa--aatatgggacagcaaaatttctcatata-ctgctgaccaggtttataaaacgttgcaatcacttaggagaattgtttggc-agtttctcaggcttagatatttgtcccaaagaattgaaacacgggttcacaaaaatatttgcttagaaatggtcacagcagcttgattcatcataaccccaaatgagagacaatccagatgtccatcaaatc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2722540 506 - 2847728 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaa-tgggagatactatttgtaaaacatatgtctgacaaagaacttgtatccaaaaagtataaataacttttgcaatta---------------------aataataa---caatataaagaaaaattacaaatatggaaaagattgagatacat--tttaccatggaagatgtatgacccacaagcagatta----------aacatcatcagttatcaggaaaatgaaaattaaaatcacagca--------------atttatccattcacac-actaaaataattacaatttaaaccccaatagtaataaaatttggcaaa--aatatgggacagcaaaacttctcatgtg-ctgctgaccaggtttataaaacagtgcaaccacttacgagaattgtttgac-ggtttctcaggcttcgatatttgtcccaaagaattgaaacacgggttcacaaaaatacttgcctagaaatggtcacagcagcttgattcatcatagccccaaatgagagacaatccaaatgtccatcaaatc i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13074540 506 - 14256875 TCCA------------------------------------------------------------------------------------------TGAg------aaaat------tcaaaccaccaactgggagacattatgtgtaaaacctatgt----caaataacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatatggagaaaaactgcaaatagggaaaagattgagatacat--ttgacaataggagatatatgacccacaggcagatgaaaagctgctcaccatcgttagttatcaggaaaatgcaaattaaaatcacaggg--------------atatatccattcacac-actcaaatgactgcaatttaacactcaataataacaagatttggcaaa--gaagtagggcaacaagaatcctcatatg-ctgctgaacaggcttataaaatggtgcagccacttaggagaattgtttggc-agtttgtcaggcttaggtatttatcctgaagaactgaa--gcaggtttacaaaaatccttgcgtagaaatggtcacagcagctcaattcatcattgtcccaaatgagagacaacccaaatgtccacc----- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3364421 514 - 5030052 TTCA------------------------------------------------------------------------------------------TAAg------aaaat------tcaaaccaccaaccgggagacattatttgtaaaacatatgtctgacaaataacttgtatccaaaaggtataaataatttttgcaatta---------------------aataataa---caatgtagagaaaaactgcaaatagggaaaagatggagatacat--ttgacaatagaagatatatgacccacaagcagatgaaaagctgctcaccatcatcagttatcaggaaaattcaaattaaaatcacaggg--------------atatgtccattcacac-actcaaatgactacaatttaatactcaataatagcaagatttggcaaa--gaagcggggcaac---aattctcacatg-ctgctgaacaggtttataaaatggtgcagccacttaggagaattgtttggc-agtttctcaggcttaggtatttatcctgaagaactgaaacacaggtttacaaaaatacttgcatagaaatggtcacagcagctcgattcatcacagtcccaaatgatagacaacccaaatgtccaccaaatc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11214070 502 - 11315646 CTCA------------------------------------------------------------------------------------------TAGGACAtgaaaagt------tcaaaccacaaactgggtggttatatttgtagaccatatgcctgactaaggaggtgtattgaaaaggcatgaggaatttgtacaacta---------------------aataataatattaacaaaaagaagaattgaaaatgggcaaaatgttgaaatacac--ttgacaatatatgatatgtgaaccac-ggcaaataaaaagctgctcaagatcattagttaccagggaaatgcaaattacaggcacagtgaagcgcgcacaaacacacacacacacacac-acacaaataactac-attaaaagttcac---caataagatttgtcaagtttgtgtggggcgatgga--ttcttacatc-atgttga-taggtatgtaaaattgttcaaccccgtgagagaattgtttggcaaatttcttatttttgagtatttatccagaggaaataaagc--------------------------aaatgttcattacagctttattcataatagctccaaa-------caacacaaatgtccattaaGTC i otoGar3.GL873580 C 0 I 973 s canFam3.chr16 16928528 603 - 59632846 ttcactcattagttttaataagctttttctagatttcttagaattttttatgtGCGGAGAaacatttaaaacatctacgcttcagaaaatcagttaag------aagatgaaaaatcaaaccacctactaagagacaatgtttgtaacacatat--ctgacacaggacttgtatcc-caaggtataaagca-ttttactactacttaacaaccaccaccaccacaataatag---caataaaaagcacaattgcaaataggctaaagtttgaaacagatgcttaatgatggaagatatatgaaccgcaagcagatga-aagctgttcaacattattagttattagagaaatgcagatgaaaatctcagtg--------------acatatcagtacacacgactaaaatga---------aaaatcctaagatcataagatttgg-aag--gttgttgagtcatcagaattcttatatatttgctga-tggacttgtaaaatggtacaaccactctggggaatgccttagc-agtttcttactcttagg-------------gaaatgga-----taccctctaaaatacctatgtagaaatattcacagcagtttcatttataatagccccaaatggatcacaatcca-atgtccatcaaatc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I a score=65683.000000 s hg38.chr4_KI270789v1_alt 79358 10 + 205944 acagacatgg s panTro5.chr4 192870984 10 + 194502333 acagacatgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754812 10 + 195804263 acagacatgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791261 10 + 4876863 acagacatgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676964 10 + 115148730 acagacatgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962339 10 + 190429646 acagacatgg i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292139 10 - 25927173 acagacatgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326624 10 + 4669795 acagacatgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286116 10 + 135778131 acagacatgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723046 10 - 2847728 acagacatgg i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13075046 6 - 14256875 ----acatgg i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3364935 10 - 5030052 acagacatgg i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16929131 10 - 59632846 atggacatgg i canFam3.chr16 C 0 I 529 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11214572 973 - 11315646 I a score=509904.000000 s hg38.chr4_KI270789v1_alt 79368 93 + 205944 gaaaatgaat---------------------------------------------caacaaCATAGATCTCATGTT----------AGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCtctagaaaac s panTro5.chr4 192870994 103 + 194502333 gaaaatgaat---------------------------------------------caacaaCATAGATCTCATGTTATTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCtctagaaaac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754822 103 + 195804263 gaaaatgaat---------------------------------------------caacaaCATAGATCTCATGTTATTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCtctagaaaac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791271 100 + 4876863 gaaaatgaat---------------------------------------------caacaaCAGAGATCTCATGTTATTTTAGGTTA---TCTTCTAAGTGGGCAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCtctagaaaac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112676974 103 + 115148730 gaaaatgaat---------------------------------------------caacaaCATAGATCTCATGTTATTTTAGGTAAGTCTCTTCTAAGTGGAGAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAGAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962349 103 + 190429646 gcaaatgaat---------------------------------------------caacaaCATAGATGTCATGTTCTTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAAAAC i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292149 103 - 25927173 gcaaatgaat---------------------------------------------CAACAACATAGATGTCATGTTCTTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326634 103 + 4669795 gcaaatgaat---------------------------------------------caacaaCATAGATCTCATGTTCTTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286126 103 + 135778131 gcaaatgaat---------------------------------------------CAACAACATAGATCTCATGTTCTTTTAGGTAAGTCTCTTCTAAGTAGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723056 103 - 2847728 gcaaatgaat---------------------------------------------CAACAACATAGATCTCATGTTCTTTTAGGTAAGTCTCTTCTAAGTGGACAGGTTTTTATTTTCCAATCCAGTAAGACAAATTCTCTAGAAAAC i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13075052 148 - 14256875 gaaaagtaatcatgatatgtgcatacaatgaactgctctgtaataaatactgttgcagaaacatagatCTCATGTTGTTTTAGGCAGGTCTCTCCTCAGCGAGCAGGTTTTTATTTTCTATTCCAGTGAGACGAATTCTCTAGAAAAC i saiBol1.JH378165 C 0 I 1565 s aotNan1.NW_018492112v1 3364945 148 - 5030052 gaaacgtaatcatgatatgtgcatacggtgaaatgctctgtaataaaTACTGTTGCAGAAACATAGATCTCATGTTGTTTTAGGTAGGTCTCTTCTCAGCGAACAGGTTTTTATTTTCCAGTCCAGTAAGACAAATTCTCTAGAAAAC i aotNan1.NW_018492112v1 C 0 I 1494 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16929141 529 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11214572 973 - 11315646 I a score=16557.000000 s hg38.chr4_KI270789v1_alt 79461 3 + 205944 --ggc s panTro5.chr4 192871097 5 + 194502333 tgggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754925 5 + 195804263 tgggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791371 5 + 4876863 tgggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677077 5 + 115148730 TGGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962452 5 + 190429646 TGGAC i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292252 5 - 25927173 TGGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326737 5 + 4669795 TGGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286229 5 + 135778131 TGGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723159 5 - 2847728 TGGAC i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16929141 529 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11214572 973 - 11315646 I a score=142856.000000 s hg38.chr4_KI270789v1_alt 79464 34 + 205944 atagtacccacctcacaagttcactgtgagcatt s panTro5.chr4 192871102 34 + 194502333 atagtacccacctcacaagttcactgtgagcatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754930 34 + 195804263 atagtacccacctcacaagttcactgtgagcatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791376 34 + 4876863 atagtacccacctcacaagttcactgtgagcatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677082 34 + 115148730 atagtacccacctcacaagttcactgtgagcatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962457 34 + 190429646 atagtacccacctcacaagttcattgtgagcatt i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292257 34 - 25927173 atagtacccacctcacaaattcattgtgagcatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326742 34 + 4669795 atagtacccacctcacaagttcattgtaagcatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286234 34 + 135778131 atagtacctacctcacaagttcattgtgagcatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723164 34 - 2847728 atagtacccacctcacaagttcattgtgagcatt i manLeu1.NW_012102221v1 C 0 C 0 s canFam3.chr16 16929670 30 - 59632846 ataataggtgcctcaaaagatgattgtaat---- i canFam3.chr16 I 529 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11214572 973 - 11315646 I a score=122628.000000 s hg38.chr4_KI270789v1_alt 79498 26 + 205944 aaatgaattggtttatttaacacatg s panTro5.chr4 192871136 26 + 194502333 aaatgaattggtttatttaacacatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754964 26 + 195804263 aaatgaattggtttatttaacacatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791410 26 + 4876863 aaatgaattggtttatttaacacatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677116 26 + 115148730 aaatgaattggtttatttaacacgtc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962491 26 + 190429646 aaatgaattggtttatttaacacgtc i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292291 26 - 25927173 aaatgaattggtttatttaacacgtc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326776 26 + 4669795 aaatgaattggtttatttaacacgtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286268 26 + 135778131 aaatgaattggtttatttaacacgtc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723198 26 - 2847728 aaatgaattggtttatttaacatgtc i manLeu1.NW_012102221v1 C 0 C 0 s otoGar3.GL873580 11215545 25 - 11315646 aaatgaattggtatatttaa-atgtg i otoGar3.GL873580 I 973 I 2 s canFam3.chr16 16929700 23 - 59632846 aaatgaaccggtatat---acatgta i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e colAng1.NW_012116221v1 850430 1381 + 2368649 M e macFas5.chr5 187908995 2862 + 189454096 I a score=769756.000000 s hg38.chr4_KI270789v1_alt 79524 150 + 205944 tcaaac-attgtctg-----gAAAATTCAGAGCACTATATATTCAGAGCACTATGTATATGAGTCTTGGTTATGAGTATTACTGAAACTTCTAtgtgccttgcttttcctgtatttcttgtcacctcattccccttcctcatggctccttttgaag s panTro5.chr4 192871162 150 + 194502333 tcaaac-attgtctg-----gAAAATTCAGAGCACTATATATTCAGAGCACTATATATATGAGTCTTGGTTATGAGTATTACTGAAACTTCTATGTGCCTTGCTTTTCCTGTATTTCTTGTCACCTCGTTCCCCTTCCTCATGGCTCCTTTTGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192754990 150 + 195804263 tcaaac-attgtctg-----gAAAATTCAGAGCACTATATATTCAGAGCACTATATATATGAGTCTTGGTTATGAGTATTACTGAAACTTCTATGTGCCTTGCTTTTCCTGTATTTCTTGTCACCTCATTCCCCTTCCTCATGGCTCCTTTTGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791436 134 + 4876863 tcaaac-attgtctg-----gaaaattcagagcactata----------------tatatgagtcttggttatGAGTATTACTGAAACTTCTATGTGCCTTGCTTTTCCTGTATTTCTTGTCACCTCGTTCCCCTTCCTCATGGCTCCTTTTGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677142 150 + 115148730 tcaaac-attgtctg-----gAAAATTCAGAGCACTATATATTCAGAGCACTATATATATGAGTCTTGGTTATGAGTATTACTGAACCTTCTATGTGTCTTGCttttcctgtatttcttgtcaccttgctccccttcctcatggctccttttgaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962517 149 + 190429646 tcaaac-attgtctg-----AAAAATTCAGAGCACTGTATGTTCAGAGCACTATATATATGAGTCTTGGTTATGAG-ATTACTGAACCttctgtgtatcttgcttttcctgtatttcttgtcccctcgttccccttcctcatggctccttttgaag i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292317 149 - 25927173 tcaaac-attgtctg-----AAAAATTCAGAGCACTGTATGTTCAGAGCACTATATATATGAGTCTTGGTTATGAG-ATTACTGAACCttctgtgtatcttgcttttcctgtatttcttgtcccctcgttccccttcctcatggctccttttgaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326802 149 + 4669795 tcaaac-attgtctg-----AAAAATTCAGAGCACTGTATATTCAGAGCACTATATATATGAGTCTTGGTTATGAG-ATTACTGAACCttctgtgtgtcttgcttttcctgtatttcttgtcccctggttccccttcctcatggctccttttgaag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286294 149 + 135778131 tcaaac-attgtctg-----AAAAATTCAGAGCACTGTATGTTCAGAGCACTATATATATGAGTCTTGGTTATGAG-ATTACTGAACCttctgtgtgtcttgcttttcctgtatttcttgtcccctggttccccttcctcatggctccttttgaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723224 149 - 2847728 tcaaac-attgtctg-----AAAAATTCAGAGCACTGTATATTCAGAGCACTATATATATGAGTCTTGGTTACGAG-ATTACTGAACCttctgtgtatcttgcttttcctgtatttcttgtcccctggttccccttcctcatggctccttttgaag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 851814 149 + 2368649 TCAAAC-ATTGTCTG-----AAAAATTCAGAGCACTGTATATTCAGAGCACTATACGTATGAGTCTTGGTTATGAG-ATTACTGAACCttctgtgcgtcttgctttttctgtatttcttgtcctctcgctccccttcctcatggctccttttgaag i colAng1.NW_012116221v1 M 1381 C 0 s otoGar3.GL873580 11215572 132 - 11315646 tcagacaatcacctg-----gcaaacatgaggcacCACA----------------CACGTGCATCTTGGTTCCTGATGTTACTGAGCCTTCTGTAGGCCCTGCCATTCC--TCCTCCTTATCCCCCCATAActctccctc-tggcttcttttgaag i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16929723 147 - 59632846 TCGAAC-ATTAGCTGTTCTTTCTTTTTTTAAACATTAGCTGTTCAAAGCACTATTTA----AGACTTGATTATAAGTATTATTGAACCTTCTGTATGTTCCTCTTTTC--ATATCTCTTGTGTCCATATACCCCTTCTC--TGGCTCCATATGAAG i canFam3.chr16 C 0 I 633 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=6188.000000 s hg38.chr4_KI270789v1_alt 79674 4 + 205944 atag----- s panTro5.chr4 192871312 4 + 194502333 ATAG----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192755140 4 + 195804263 ATAG----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791570 4 + 4876863 ACAG----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677292 4 + 115148730 atag----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962666 4 + 190429646 agag----- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292466 4 - 25927173 agag----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326951 4 + 4669795 agag----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286443 4 + 135778131 agag----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723373 4 - 2847728 agag----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 851963 4 + 2368649 agag----- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11215704 9 - 11315646 tgactaacg i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3906572 2221 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16929870 633 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=434538.000000 s hg38.chr4_KI270789v1_alt 79678 71 + 205944 tatttaatttacatctccattactgtttggaagctatgtcctttgttatactattttaatagtcaccctta s panTro5.chr4 192871316 71 + 194502333 TATTTAATTTACAtctccattactgtttggaagctatgtcctttgttatactattttaatagtcaccctta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192755144 71 + 195804263 TATTTAATTTACAtctccattactgtttggaagctatgtcctttgttatactattttaatagtcaccctta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791574 71 + 4876863 TATTTAATTTACAtctccattactgtttggaagctatgtcctttgttatactattttaatagtcaccctta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677296 71 + 115148730 tatttaatttacatctccattactgttcggaagctatgtcctttgttatactattttaatagtcaccctta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962670 71 + 190429646 tatttaatttacatctccatcactgtttggaagctatgtcctttgttatactattataatagtcactctta i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292470 71 - 25927173 tatttaatttacatctccatcactgtttggaagctatgtcctttgttatactattataatagtcactctta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3326955 71 + 4669795 tatttaatttacgtctccatcactgtttggaagctatgtcctttgttatactattgtaatagtcactctta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286447 71 + 135778131 tatttaatttacatctccatcactgtttggaagctatgtcctttgttatactattataatagtcactctta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723377 71 - 2847728 tatttaatttacgtctccattactgtttggaagctatgtcctttgttatactattgtaatagtcactctta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 851967 71 + 2368649 tatttaatttatgtctccattactgtttggaagctatgtcctttgtcatactattttaatagtcactccta i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3908793 71 + 3993831 tatttaattttcttctcctttactgtttgtaagctatgtcctatatgatattattttaatagttaccttta i proCoq1.NW_012145301v1 I 2221 C 0 s otoGar3.GL873580 11215713 70 - 11315646 tatttaattttcttctctttaactgtttggaagtgatgtcc-atatgatatcattttaatagttgcctttg i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16929870 633 - 59632846 I e mm10.chr8 86555769 7109 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=3037213.000000 s hg38.chr4_KI270789v1_alt 79749 522 + 205944 aaatttgaatgtgtgtataaaacgtaagtcctaaagttaatcagtgt--c-tttactttcttcaccctcagattcaaggacctaagaatgatttatttctcatcattcctttcaaatcacacttgca---gttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttgatatt-aacaaaagcaagagtc---------------agatctcctctgtgttcctt-gtctcccttccttgatacatttc-agaccttccttatgggaccttattctttgtttgtttttgaagcccaacc-ttagaagctgtttta-tgaggcttatt---tagaagtaaactctttcaaaatctgctcatttgtc--tttatttt-gtcctcattctcgaaagatactttag--ccgtataaactattctccattgcccat--------tattttctctgaacac-----------------------------------attgagggcgtttcactgtgttcttgctttgctca-ttgtttttgtggctcagctagctgtcagtctgaat---gttccttcgtaggatgtgcg s panTro5.chr4 192871387 527 + 194502333 aaatttgaatgtatgtataaaacgtaagtcctaaagttaatcaatgt--c-tttactttcttcaccctcagattcaaggacctaagaatgatttatttctcatcattcctttcaaatcacatttgcagttgttgtattttttaaatttctgccttgcttttataacccacaaattagacattgtttgatattgaacaaaagcaagagtc---------------agatctcctctgtgttcctt-gtctcccttccttgatacatttc-agaccttccttatgggaccttattctttgtttatttttgaagcccaacctttagaagctgtttta-tgaggcttatt---tagaagtaaactctttcaaaatctgctcatttgtc--tttatttt-gtcctcattctcgaaagatactttag--ccgtataaactattctccattgccctt--------tattttctctgaacac-----------------------------------attgagggcgtttcactgtgttcttgctttgctca-ttgtttttgtggctcagctagctgtcagtctgact---gttccttcgtaggATGTGCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192755215 527 + 195804263 aaatttgaatgtatgtataaaacgtaagtcctaaagttaatcaatgt--c-tttactttcttcaccctcagattcaaggacctaagaatgatttatttctcatcattcctttcaaatcacatttgcagttgttgtattttttaaatttctgccttgcttttataacccacaaattagacattgtttgatattgaacaaaagcaagagtc---------------agatctcctctgtgttcctt-gcctctcttccttgatacatttc-agaccttccttatgggaccttattctttgtttatttttgaagcccaacctttagaagctgtttta-tgaggcttatt---tagaagtaaactctttcaaaatctgctcatttgtc--tttatttt-gtcctcattctcgaaagatactttag--ccgtataaactattctccattgccctt--------tattttctctgaacac-----------------------------------attgagggcgtttcactgtgttcttgctttgctca-ttgtttttgtggctcagctagctgtcagtctgact---gttccttcgtaggatgtgcg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3791645 522 + 4876863 aaatttgaatgtatgtataaaacgtaagtcctaaagttaatcaatgt--c-tttactttcttcaccctcagattcaaggacctacgaatgatttatttgtcatcattcctttcaaatcacatttacagttgttgtatttttaaaatttctgccttgcttt-----cccacaaattagacattgtttgatagtgaacaaaagcaagagtc---------------agatctcctctgtgttcctt-gtctcccttccttgatacatttc-agaccttccttatgggaccttattctttgtttgtttttgaagcccaacctttagaagctgttttg-tgaggcttatt---tagaagtaaactctttcaaaatctgctcatttgtc--tttatttt-gtcctcattctcgaaagatactttag--ctgtataaactattctccattgcccat--------tattttctctgaacac-----------------------------------actgagggcgtttcactgtgttcttgctttgctca-ttgtttttgtggctcagctagctgtcagtctgaat---gttcctttgtagaatgtgcg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677367 527 + 115148730 aaatgtgaatgtgtgtataaaacgtaagtcctaaagttaatcaatgt--c-tttactttcttcacccgcagattcaaggacctaagaatgatttatttctcatcattcctttcaaatgacatttgca---gttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttgatattgaacaaaagcaagagtcagtt-----------agatctactctgtgttcctt-gtctcccttccttgatacatttc-agaccttccttatgggacc-tattgtttgtttgtttttgaagcccaacctttagaagctgtttta-tgaggcttatt---tagaagtaaactctttcaaaatctgctcatttgtc--tttatttt-gtcctcattcttgaaagattctttag--ccgtataaactattctccattgcccat--------tattttctctgaacac-----------------------------------attgagggcgtttcactgtgttcttgctttgctca-ttgtttttgtggctcagctagctgtcagtctgaat---gttccttcgtaggATGTGCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188962741 531 + 190429646 aaatttgaatgtgtgtataaaacgtaagtcctaaagttgatcagtgt--c-tttactttcttcaccctcagattcaaggaccttagaatgatttatttcttatcattcctttcaaatcacgtttgcaattgttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttaatattgaacaaaagcaagagtcagtt-----------agatctactctgtgttcctt-atctcccttccttgatacatttc-agaccttccttatgggaccctattctttg----tttttgaagcccagcctttagaaactgttttattgagggttatt---tagaagtaaacgctttcaaaatctgctcatttgtctttttttttt-gtcctcattcttgaaggatactttagcaccgtataaactattcgtcattgcccat--------ta-tttctctgaatac-----------------------------------attgagggtgttccactgtgttcttgctttgctca-ttgtttttgtagttcagctagctgtcagtcagaat---gttccttcgtaggatttgcg i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24292541 531 - 25927173 aaatttgaatgtgtgtataaaacgtaagtcctaaagttgatcagtgt--c-tttactttcttcaccctcagattcaaggacctttgaatgatttatttcttatcattcctttcaaatcacgtttgcaattgttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttaatattgaacaaaagcaagagtcagtt-----------agatctactctgtgttcctt-atctcccttccttgatacatttc-agaccttccttatgggaccctattctttg----tttttgaagcccagcctttagaaactgttttattgagggttatt---tagaagtaagcgctttcaaaatctgctcatttgtctttttttttt-gtcctcattcttgaaggatactttagcactgtataaactattcgtcattgcccat--------ta-tttctctgaatac-----------------------------------attgagggcgtcccactgtgttcttgctttgctca-ttgtttttgtagttcagctagctgtcagtcggaat---gttccttcgcaggatttgcg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3327026 526 + 4669795 aaatttgaatgtgtgtataaaacgtaagtcctaaagttgatcagtgt--c-tttactttcttcaccctcagattcaaggaccttagaatgatttatttcttatcattcctttcaaatcacgtttgcaattgttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttaatattgaacaaaagcaagagtcagtt-----------agatctactctgtgttcctt-atctcccttccttgatacatttc-agaccttccttatgggaccctattctttg----tttttgaagcccaacctttagaaac--ttttattgagggttatt---tagaagtaaacgctttcaaaatctgctcatttgtc--tttatttt-gtcctcattcttaaaagatactttag--ccgtgtaaactattcttcattgcccat--------tattttctctgaatac-----------------------------------attgcgggcgttccactgtgttcttgctttgctca-ttgtttttgtagttcagctagctgtcagtcggaat---gttccttcgtaggattggcg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134286518 563 + 135778131 aaatttgaatgtgtgtataaaacgtaagtcctaaagttgatcagtgt--c-tgtactttcttcaccctcagattcaaggaccttagaatgatttatttcttatcattccttgcaaatcacgtttgcaattgttgtatttttaaaacttctgccttgcttttataaccgacaaattagacattgtttaatattgaacaaaagcaagagtcagtc-----------agatctactctgtgttcctt-atctcccttccttgatacatttc-agaccttccttatgggaccctattctttg----tttttgaagcccagcctttagaaactgttttattgagggttatt---tagaagtaaacgctttcaaaatctgctcatttgtc--ttttttttggtcctcattcttgaaggatactttag--ccgtataaactattcatcattgcccgt--------ta-tttctctgaatacattgagggcgttccactgtgttcttgcttTAATACATTGAGGGCGTTCCACTGTGTTCTTGCTTTGCTCA-TTGTTTTTGTAGTTCAGCTAGCTGTCAGTCGGAAT---GTTCCTTCGTAGGATTTGCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723448 526 - 2847728 aaatttgaatgtgtgtataaaacgtaagtcctaaagttgatcagtgt--c-tttactttcttcaccctcagattcaaggaccttagaatgatttatttcttatcattcctttcaaatcacatttgcaattgttgtagttttaaaatttctgccttgcttttataactcacaaattagacattgtttaatattgaacaaaagcaagagttagtt-----------agatccactctgtgttcctt-atctcccttccttgatacatttc-agaccttccttatgggaccctattctttg----tttttgaagcccaacctttagaaac--ttttattgagggttatt---tagaagtaaacgctttcaaaatctgctcatttgtc--tttatttt-gtcctcattcttgaaagatactttag--ctgtataaactattcttcattgcccat--------tattttctctgaatac-----------------------------------attgagggcgtcccactgtgttcttgctttgctca-ttgtttttgtagttcagctagctgtcagtcggaat---gttccttcgcaggatttgcg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 852038 524 + 2368649 aaatttgaatgtgtgtataaaacgtaagtcctaaagttggtcagtgt--cttttactttcttcaccctccgattcaaggaccttagaatgatttatttcttatcattcctttcaaatcacatttgcaattgttgtatttttaaaatttctgccttgcttttataacccacaaattagacattgtttaatattgaacaaaagcaagagtc---------------agatctgctctgtgttcctt-atctcccttccttgatacatttctagaccttccttatgggaccctattctttg----tttttgaagcccaacctttagaaac--ttttattgagggttatt---tagaagtaaacgctttcaaaatctgctcatttgtc--tttttttg-gtcctcattcttgaaagatactttag--ccgtataaactattctttgttgcccat--------tattttctctgaatac-----------------------------------accgagggcattccactgtgttgttgctttgctcg-ttatttctgtagttcagctagctgtcggtcggaat---gttccttcgtaggatttgcg i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3908864 502 + 3993831 aattttgagcatgtgtat-----ataag-ctctaatttaatcaccat--c-tttactttcttcctcttcaaatttgaggatcttagaatgctttagttcccatcacccctttcaaat-acatttgcaattgtcatatttttaaaatttctagcttgcttttgtaaccccaaaattagacattgtttaatattttataaaagca--aat-----------------gtcataccctgtgttccttactctcccttccttgttgcatttc-ggaccttcc-tgtgggacccttttccttc----ttttggaagcccatccttcagaagttagtttaccgagggacatt---taaaagtaaactctttcaaaatctgctcatttg--------------tcttcattcttggaagatactttag--ctgtgtaaacaattctagattggccat--------tattttctctgaacac-----------------------------------attgaggacatttcactgtattcttgctttgtgcc-ttgtttttgtgggtaagctaactgtcagtcttaat---gtagcttagtaggatttgtg i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11215783 512 - 11315646 aattttgagcacatacat-----gtaagtcccaaatttaatcagtat--c-ttaactttctt-ctcttcaatttcaaggaccttggaatgcttcatttcccctcacccctttgaaat-acatttgcaattgtcccatttttataatgtctagctggctcttgtgacccatacattagactttgtttaatattttatgaaacaa--actcatct-----------agacatacccttt--------ctctcccttccttgatgcattgc-aaaccttcc-tgttggaacctttt-cttc----ctttagaagcccattctttggaagttaaattactgagggacatt---tagaagtaaacactttcaaaatctgctcatttgtc-------ttt-atcttcattcttgaaagcttcttcag--ctgtgtgaacaattctagactgactttattttctatattttctctgaatat-----------------------------------actgagggcatgtcactgtattcttgctttattca-ttgttttcatgg----gctaactgtcagtctaaGTCAGCTAACTGAGTAGGATTTGTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86562878 509 - 129401213 AAAAATAAAGACGTACTTATAACCTAAGTC-----ATCAATTAATGTAAT-TTAATCCCTTTCACTTCCAG--TCAATGACATTACATAGATTTATTTTCCATCACCTCTTTCAGAGCATGTTTATAAATGTCATG-TTTTGAAATTGCAGATTAGTTTTTACAACCCACAAATTA--------------------AAAAAAAAAAGTTCATTCTATAACACAGCGTTTTAGTCTGCTGTCCCT-TCCTCTGGGTATCGTTACATGAC-AGATCA----TACAAGGtccctttccttc----ttttagatacatacctttcaggaggttttttattgacgggtgctcagtagaagttcactcatct---gtctgctcatttgtt--gttatttt--tcctcatcctttaaagatactttac--ctgtgtaaacatttctagactgactat--------tattttcgctaagtat-----------------------------------catgagcacattccaccatattcctgttttgttcatttatttttatgaataagccagctgtcactttaaGT---ACACCTTGTTAGGATTTGTG i mm10.chr8 I 7109 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16929870 633 - 59632846 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=2417528.000000 s hg38.chr4_KI270789v1_alt 80271 390 + 205944 cttgtttcttct-agatccctttgagCACTGTAGACGCAGGTCCTCTTTATAGTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTTCGCA--------------------------------------------------TAAACAGTATGGGCTTAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAACAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATTGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTT-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCCTG-TGC-----TGTGCTC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT s panTro5.chr4 192871914 390 + 194502333 CTTGTTTCTTCT-AGATCCCTTTGAGCACTGTAGACGCAGGTCCTCTTCATAGTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTTCGCA--------------------------------------------------TAAACAGTATGGGCTTAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAACAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATTGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTT-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCA-TGC-----TGTGCTC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192755742 390 + 195804263 cttgtttcttct-agatccctttgagCACTGTAGACGCAGGTCCTCTTCATAGTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTTCGCA--------------------------------------------------TAAACAGTATGGGCTTAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAACAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATTGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTT-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCA-TGC-----TGTGCTC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3792167 390 + 4876863 cttgtttcttct-agatccctttgagCACTGTAGACGCACGTCCTCTTTATAGTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGATCGCA--------------------------------------------------TAAACAGTATGGGCTTAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAACAGGGGTGAAGTTTTTACTTTTTCTCCATCTCT-----ATGAAAATTGAGACAGGAGTTA---GGCAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTGAGGTT-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCG-TGC-----TGTGCTC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTTATC-----CA-TGCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112677894 389 + 115148730 CTTGTTTCTTCT-AGGTCCCTTTGGGCACTGTAGACGCATGTCCTCTTTATACTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTACGCA--------------------------------------------------TAAACAGTATGGACTTAGGTTCCCAACC-ATAG-CAGCCCAGTGGGTACCACATTAACA-GGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAGATTGAGACAGGAGTTA---GGTAGATTGTTTTTCCGT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTT-TG-AA--CTGTAGGCCACAGGA------CACTGCGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAGTGCTAGCTTTCCTCCTCG-TGC-----TGTGCTC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188963272 390 + 190429646 cttgtttctTCT-CGGTCCCTTTGGGCACTGTAGACGCAGGTCCTTTTTATACTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACA--------------------------------------------------TAAACAGTATGGACTGAGGTTCCCAGCC-ACGG-CAGCCCAGTGGGTACCACATCAGCAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATGGAGACAGGAGTTA---GGTAGATTGTTCTTCCAT----TCTCAGGGGTCTGGCTTTGTGCAGATGGTCTCAGGTC-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGTTTCAATGCTCGCTTTCCTCCTCA-TGC-----TGTGGCC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24293072 415 - 25927173 cttgtttctTCT-CGGTCCCTTTGGGCACTGTAGACGCAGGTCCTTTTTATACTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTATTGAGGTCCACATAAACAGTATGGACTGAGGTCCACA--------------------------------------------------TAAACAGTATGGACTGAGGTTCCCAACC-ACGG-CAGCCCAGTGGGTACCACATCAGCAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATGGAGACAGGAGTTA---GGTAGATTGTTCTTCCAT----TCTCAGGGGTCTGGCTTTGTGCAGATTGTCTCAGGTC-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTCGCTTTCCTCCTCA-TGC-----TGTGGCC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3327552 390 + 4669795 cttgtttcttcc-tggtccctttGGGCACTGTAGACGCAGGTCCTCTTTATACTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACA--------------------------------------------------TAAACAGTATGGACTGAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAGCAGAGGTGAAGTTTTTACTTCTTCTCCATCTTT-----ATGAAAATTGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTC-TG-AA--CTCTAGGCCACGGGA------CACAGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCA-TGC-----TGTGGCC-CTGCCTAGGTCCTGCCCACATGGACTTCTTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287081 440 + 135778131 CTTGTTTCTTCT-CGGTCCCTTTGGGCACTGTAGACGCAGGTCCTCTTTATACTACAATTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACATAAACAGTATGGTCTGAGGTCTACATAAACAGTATGGACTGAGGTCCACGTAAACAGTATGGACTGAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAGCAGGGGTGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATGGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTGTGCAGATGGTCTCAGGTC-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATTCTAGCTTTCCTCCTCA-TGC-----TGTGGCC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2723974 390 - 2847728 cttgtttcttct-tggtccctttGGGCACTGTAGACGCAGGTCCTCTTTATACTACAATTCT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACA--------------------------------------------------TAAACAGTATGGACTGAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATCAGCAGGGGGGAAGTTTTTACTTTTTCTCCATCTTT-----ATGAAAATGGAGACAGGAGTTA---GGTAGATTGTTTTTCCAT----TCTCAGGGGTCTGGCTTTGTGCAGATGGTCTCAGGTC-TG-AA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCA-TGC-----TGTGGCC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 852562 390 + 2368649 tttgtttcttct-tggtccctttGGGCACTGTAGATGCAGGTTGTCTTTATACTACAGTTTT-GGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACA--------------------------------------------------TAAACAGTATGGACTGAGGTTCCCAACC-ATGG-CAGCCCAGTGGGTACCACATTAGCAGGGGTGAAGTTTTTACTTTTTCCCCATCTTT-----ATGAAAATTGAGACAGGAGTTA---GGTAGATAGTTTTTCCAT----TCTCAGGGGTCTGGCTTTATGCAGATGGTCTCAGGTC-TG-GA--CTCTAGGCCACAGGA------CACTGGGTGT-----GGTCCCAGGG----AGTCTGGTGGCTTCAATGCTAGCTTTCCTCCTCA-TGC-----TGTGCCC-CTGCCTAGGTCCTGCCCACATGGACTTCCTTCACCTTCATGCAGGCTCATC-----CA-TGCTTC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3909366 393 + 3993831 cttgtttctttC-AGGTCCCTGTGAACACTGCAGACTCAGACCCACTTTATAGCACAATTTTGGGCTTGT------------------------------------------------------------------------------------------------------------------------------------------------GTAT-------------------------TGAGGTCCACA--------------------------------------------------TAAACAGAATGGTTTCAGGCTCCAAGCC-AAGGCCAGGCAAGTGAACAACACATTGGCAGGAGATAATTTTTTATTTTTTCTCCATCCTT-----ATGCAAGTTGAAACAGCAGTTA---GATGGATTGTTTTTCCATC---TCCCAGGGTTCTGGCTTCGTGCAGATGGTCTCAGATC-TGAAA--CTCTGGGCCACAGGA------CACTGAATGT------GTCCTAGG-----TGTCTAGAGGCTTCCACTCTCACATTTCTCCCTT-TGC-----TGTGCCC-CCGCCTGGCCCCTGCCCATGTGGGCTTCTTCCACTGCCAAGCCGGCTCATC-----CACTGCTTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11216295 548 - 11315646 CTTGTTTCCTTC-AGGTCCCTGTGAACAAC-CAGATTCAGATCCACTTT---GTACAATTTTGGGCTTGTATATTGAGAGCTACATTAGTATAATCTTGAGCTGGTATATCAAGGGCTACAGTATTACAATCTTCGACTTGGATATCAAGTGCTAGGTTAATATAATCTTGGCCTTGTACCCTGAGGGATACATTAGTACAATCTTGATCATGAATAT-------------------------TGAGGGCTATA--------------------------------------------------TAAACAG-ATGGATTCAGGCTGTAAACC-CGGGCCAGGCCAGTGAACATCACATTGGCAGGGGAGAACTTTTAATTTTTTCTCCATCCTT-----ATGTAAGTTAAAACAGCAGTTAGATGATGGATTGTTTTTCCATC---TCCCAGGGTTCTGGTTTCATGCAGATGGTCTCAGATC-TGAAA--TGCTAGGCCACAGGA------CATTGGATGT------GTCCCAGGGCatttttatagtgatttctacacctatctttgtcctgc-ttctggtttgcactc-tgaccaagttccagtcta-atcagcttcctcaaactcc-agcctctacatcttcatctctgctct i otoGar3.GL873580 C 0 I 366 s mm10.chr8 86563387 401 - 129401213 CCTTGTTTACTT-AGGTCCCTGTGAGCATAAGAGGCTTAAGTCTACTATATATTATAATTTGGGGCTTGG------------------------------------------------------------------------------------------------------------------------------------------------GAGT-------------------------TAAGGTCTGCA--------------------------------------------------TAAACACTATGGATTCAGGCTGCATGCC-AAGGGTAAGCTACTAGACATTAAATTAGCAGGGATAATGTTTATATATTTTTTTCTTTTCTCATGCATGCCAAGTAAGATTTCATTTA---GCTATGTTTTTTTTCCCTCATTTTTCTGTGTTTTGGCTTTGTAAAAATGGTGTTAGAAC-CA-AAACTTCTAGCCCACATAA------TTCTGGATGT-----GTTTTCAAGG----TATCAGTGGGC--CATTGCCCATTTTCATATGCAGTCT-----TGAACTCTCTGCTTAGCTCCTAACCACTTAAAGTGGATTCCATTCCATGTATGTTTGTC--------TGTTAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16930503 387 - 59632846 CTGGTGTCTTCTCAGGTACATGTAAGCATGATTTACCCAGGTCCACTTTATATTACAATTTCCAACTTGT------------------------------------------------------------------------------------------------------------------------------------------------ATAT-------------------------TGAGGGCTACA--------------------------------------------------TAAACAGTATAGATTCAGGCTCCAGGCCAATAA-CAGGCCAGTGAAAATCAGATGAACAGGAAAAATCTTTCTATTTTTCCTTAATGTC------ATTCAAGTAGAGACAGCAGTTA---GGAAAATTGATTTCCCAGC---TCCCAGGGTTCTAGCTTTGTGTAGGTGGTCTCAGATCATG-AA--CTTTGGGCCACAGGGATCCCCTTCAGGATATCTTACGGTCTTAGAA----GATCTAGTGACTCC-ATGAGCACTTCTCTCCCTG-TGC-------------TTG-TTAGCTCCTGCCCATGCAGGTT---------TTTATG-AGATTCATC-----CACTGCTCT i canFam3.chr16 I 633 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=634283.000000 s hg38.chr4_KI270789v1_alt 80661 116 + 205944 ACACGTTATGCATGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTATATGAATAAAAATCAAGAGAGATGCAAGATCCGTAGTCAGTCATATTTGTGGAAATCGAA----ATCC s panTro5.chr4 192872304 116 + 194502333 ACACGTTATGCATGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTATATGAATAAAAATCAAGAGAGATGCAAGATCCGTAGTTAGTCATGTTTGTGGAAATCGAA----ATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756132 116 + 195804263 ACACGTTATGCATGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTATATGAATAAAAATCAAGAGAGATGCAAGATCCGTAGTTAGTCATGTTTGTGGAAATCGAA----ATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3792557 116 + 4876863 ACACGTTATGCATGCCCATTTGTATGTCCCAACTTAGCATTTTGATTTGTTATATGAATAAAAATCAAGAGAGATGCAAGATCCGTAGTTAGTCATGTTTGTGGAAATCGAA----ATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678283 116 + 115148730 ACACGTTATGCATGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTATATGAATAAAAATCAAGAGAGATGCAAGATCCCTAGTCAGTCCTATTTGTGGAAATCGAA----ATCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188963662 116 + 190429646 ACATGTTATGCGAGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTACATGAATAAAAATCAGAAGAGATGCAAGATACCTAGTCAGTCATGTTTGTGGAAATCGAA----ACCC i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24293487 116 - 25927173 ACATGTTATGCAAGCCCATTTGTGTGTCCCAACTTAGCATTTTGATTTGTTACATGAATAAAAATCAGAAGAGATGCAAGATACCTAGTCAGTCATGTTTGTGGAAATCGAA----ACCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3327942 120 + 4669795 ACATGTTATGCAAGCCCATTTGTGTGTCCCAATTTAGCATTTTGATTTGTTATATGAATAAAAATCAGAAGAAATGCAAGATACCTAGTCAGTCATATTTGTGGAAATTGAACACCCCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287521 116 + 135778131 ACATGTTATGCAAGCCCATTTGTGTGGCCCAACTTAGCATTTTGATTTGTTACATGAATAAAAATGAGAAGAGATGCAAGATACCTAGTCAGTCATATTTGTGGAAATCGAA----ACCC i chlSab2.chr7 C 0 I 6 s manLeu1.NW_012102221v1 2724364 116 - 2847728 ACATGTTATGCAAGCCCATTTGTGTGTCCCAATTTAGCATTTTGATTTGTTATATGAATAAAAATCAGAAGAAATGCAAGATACCTAGTCAGTCATATTTGTGGAAATTGAA----ACCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 852952 116 + 2368649 ACATGTCATGCAAGCCCATTTGTGTGTCCCAACTTAGTATTTTGATTTGTTATATGAATAAAAATCAGGAGAGATGCAAGATACCTAGTCAGTCATATTTGTGGAAAGCGAA----ACCC i colAng1.NW_012116221v1 C 0 I 442 s proCoq1.NW_012145301v1 3909759 116 + 3993831 AGAAGCTACAGATGCCTATTTGTGTGCACCAATTTAGCATTTCTGTCTGCTGTATAAATAAAAATCTGGAGAGATGCAAAATCTCTGGTTAGTCCCATTTGTGGAAATAGAA----ATCC i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86563788 102 - 129401213 ---AGTTACACATGCC--TTTGGCAGACCTCACTGAACATT----CCTGTTTCAT-----AAAATCAGAATAAGTTGAGAAGCTCTGGTCAGTCATATTTTCAGCAATATAA----ATGT i mm10.chr8 C 0 I 1 s canFam3.chr16 16930890 80 - 59632846 AAACTTTATGTGTGTTTATTTGTATGTCCCTGTTGAGCAGTTTTACTTGTTGTGTA-------------------GCATGATTTCTAATCATCC-----------------A----ATCC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=555137.000000 s hg38.chr4_KI270789v1_alt 80777 108 + 205944 CCCACACA--TTTTTTCATCCATTTGAATTTATTAAGTTTGAGGAAAATGTCTTAACAAATAAGCAAGTTTGGCTAGTCCTAGAAACTATATCTCTAACTTCTAACTTGG s panTro5.chr4 192872420 108 + 194502333 CCCACACA--TTttttcatccatttgaatttattaagtttgaggaaaatgtcttaacaaataagcaagtttggctagtcctagaaattatatctctaacttctaacttgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756248 108 + 195804263 CCCACACA--TTttttcatccatttgaatttattaagtttgaggaaaatgtcttaacaaataagcaagtttggctagtcctagaaattatatctctaacttctaacttgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3792673 108 + 4876863 CCCACACA--TTttttcatccatttgaatttattaagtttgaggaaaatgtcttaacaaataagcaagtttggctagtcctagaaactatatctctaacttctaacttgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678399 108 + 115148730 CCTACACA--TTTTTTCATCCATTTGAATTTATTAAGTTTGAGGAAAATGTCTTAACAAATAAGCAAGTTTGGCTAGTCCTAGAAACTATATCTCTAACTTCTAACTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188963778 101 + 190429646 CACACACA--TTttttcatccatttgaatttatccagtttgaggaaaatgtcttaacaaataagcaagtttggttagtactagaaacaatatc-------tctaacttgg i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24293603 101 - 25927173 CACACACA--TTTTTTCATCTATTTGAATTTATCCAGTTTGAGGAAAATGTCTTAACAAATAAGCAAGTTTGGTTAGTCCTAGAAACAATATC-------TCTAACTTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328062 102 + 4669795 CCCACACA--------CACAcatttgaatttatccagtttgaggaaaatgtcttaacaaataagcaagtttggttagtcctagaaacagtatctctaacttctaacttgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287643 110 + 135778131 CCCCCACACATTTTTTCATCCATTTGAATTTATCCAGTTTGAGGAAAATGTCTTAACAAATAAGCAAGTTTGGTTAGTCCTAGAAACAGTATCTCTAACTTCTAACTTGG i chlSab2.chr7 I 6 C 0 s manLeu1.NW_012102221v1 2724480 102 - 2847728 CCCCCACA--------CACAcatttgaatttatccagtttgaggaaaatgtcttaacaaataagcaagtttggttagtcctagaaacagtatctctaacttctaacttgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 853510 108 + 2368649 CCCACACA--TTttttcatccatttgaatttatcaagtttgaggaaaatgtcttaacaaataagcaagtttggctagtcctagaaacaatagctctaacttctaacttgg i colAng1.NW_012116221v1 I 442 C 0 s proCoq1.NW_012145301v1 3909875 94 + 3993831 CCCACA-A--GAttttctttcattttaattcaataagtttgaggaaaa-----caacaagtaaacatgtgtggctcgtcttagaaactatgtc-------tctagcttg- i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86563891 101 - 129401213 CCACAAGA--TTTTTTCATGCATTTCAATTCATTAAGTTTGAGGGCAAAATATTGATGTGTGAGCATAAATGGTTAGT--TAGCAAATCTATG-----CTGTTAGTGAGA i mm10.chr8 I 1 C 0 s canFam3.chr16 16930970 95 - 59632846 ---------CCCATTTCATTCATTTCAATTTATTAGGTTTGAGATAGAAATATTAGCAAGTAAGCATATGTGGTT-GTCCTAAAAAAACCATGTC-----TCTAGTTTGA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=143057.000000 s hg38.chr4_KI270789v1_alt 80885 31 + 205944 GAGTTACTGTACCAATTATATGGTGAAAAAA-- s panTro5.chr4 192872528 31 + 194502333 gagttactgtaccaattatatggtgaaaaaa-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756356 31 + 195804263 gagttactgtaccaattatatggtgaaaaaa-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3792781 31 + 4876863 gagttactgtaccaattatatggtgaaaaaa-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678507 31 + 115148730 GAGTTACTGTACCAATTACATGGTGAAAAAA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188963879 30 + 190429646 gagttaccataccaattctacggtgaaaa-a-- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24293704 30 - 25927173 GAGTTACCATACCAATTCTACGGTGAAAA-A-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328164 30 + 4669795 aagttaccataccaattctatggtgaaaa-a-- i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2724582 31 - 2847728 gagttaccgtaccaattctatggtgaaaaga-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 853618 30 + 2368649 gagttactgtaccaattcgatggtgaaaa-a-- i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3909969 31 + 3993831 gaactactgtaccaattatatggtgaaaaaa-- i proCoq1.NW_012145301v1 C 0 I 568 s mm10.chr8 86563992 31 - 129401213 GACTTACACTATCAATTATGTGGTTAAAGAA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16931065 33 - 59632846 GAATTAGTGTATCAATTACAGAACAGAAAAAAA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1472556.000000 s hg38.chr4_KI270789v1_alt 80916 358 + 205944 ATTATAGTTCATAATTATTTGGTATTAAAAGAGACCTAAAAATTATTTTT---T------ATTCATTCCTTTTACATCTATGAGGC-----AAAA-TGACAATGCAAAATTATATAAATGTGATTATCTACCCGCAAAATTTGGATTAAAGACTATTTTCATGTGAAAAATGTGAAAAAGATAAAACGTCACA---------CAGACTGTGAGAAAAAATG-TACTGTTTTC-ACATGTTCTTGTAAA-TATATTCTTATCCTTTTTATCTAACGTGTAGCTAAATATCAAA-------------GGGCCATTGAC----TATATATATATATA-------TAGCTGATGC--TGAAAAAGGCTGTTGAATTGTTTCAA-TTAACAATATAGCAAAAATACTAAAGCCTTTC s panTro5.chr4 192872559 356 + 194502333 attatagttcataattatttggtattaaaagagacctaaaaattattttt---t------attcattccttttacatctatgaggc-----aaaa-tgacaatgcaaaattatataaatgtgattatctactagcaaaatttggattaaagactattttcatgtgaaaaatgtgaaaaagataaaacgtcaca---------tagactgtgagaaaaaata-tattgttttc-acatgttcttgtaaa-tatattcttatcctttttatctaacgtgtagctaaatatcaaa-------------gggccattgac------tatatatatata-------tagctgatgc--tgaaaaaggctattgaattgtttcaa-ttaacaatatagcaaaaatactaaagcctttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756387 356 + 195804263 attatagttcataattatttggtattaaaagagacctaaaaattattttt---t------attcattccttttacatctatgaggc-----aaaa-tgacaatgcaaaattatataaatgtgattatctactagcaaaatttggattaaagactattttcatgtgaaaaatgtgaaaaagataaaacgtcaca---------tagactgtgagaaaaaata-tattgttttc-acatgttcttgtaaa-tatattcttatcctttttatctaacgtgtagctaaatatcaaa-------------gggccattgac------tatatatatata-------tagctgatgc--tgaaaaaggctattgaattgtttcaa-ttaacaatatagcaaaaatactaaagcctttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3792812 356 + 4876863 attatagttcataattatttggtattaaaagagacctaaaaattattttt---t------attcattccttttacatctatgaggc-----aaaa-taacaatgcaaaattatataaatgtgattatctaccagcaaaatttggattaaagactattttcatgtgaaaaatgtgaaaacgataaaacatcaca---------tagactgtgagaaaaaatg-tattgttttc-acatgttcttgtaaa-tatattcttatcctttttatctaacgtgtagctaaatatcaaa-------------gggccattgac------tatatatatata-------tagctgatgc--tgaaaaaggctattgaattgtttcaa-ttaacaatatagcaaaaatactaaagcctttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678538 355 + 115148730 ATTATAGTTCATAATTATTTGGTATTAAAAGAGACCTAAAAATCATATTT---T------ACTCATTCCTTTTACATCTATGAGGC-----AAAA-TGACAATGCAAAATTATATAAATGTGATTATCTACCAGCAAAATTTGGATTAAAGACTATTTTCATGCGGAAAATGTGATAAAGATAAAACGTCACA---------TAGACTGTGAGAAAAAATG-TATTGTTTTC-ACATGTTC--------TATATTCTTATCCTTTTTGTCTAACGTGTAGCTAAATATCAAA-------------GGGCCATTGACtatatatatatatatata-------taGCCGATGC--TGAAAAAGGCTATTGAATTGTTTCAA-TTAGCAACATGGCAAAAATATTAAAGCCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188963909 363 + 190429646 attatagttcataattatttggtattaaaagatacct-aaaatgagtttt---t------attcattccttttacatctatgaggc-----aaaa-cgacaatgcaaaattatatgaatatgattttccaccagtaaaatttggattaaagactattttcatgtggaaaatgtgataaagataaaaggtcaca---------tagactgtgagaaaaaatg-tattgttttc-acaagttcttgtaaa-tatattcttaccctttttgtctaatgtgtagctaaatatcaaa-------------gggccattgac------ta-atacatatattagtttttgctgatgctatgaaaaagtctattgaattgtttcaa-ttaacaacatggcaaaaatattaaagcctttc i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24293734 364 - 25927173 ATTATAGTTCATAATTATTTGGTATTAAAAGATACCT-AAAATGAGTTTT---T------ATTCATTCCTTTTACATCTATGAGGC-----AAAA-Cgacaatgcaaaattatatgaatatgattttccaccagtaaaatttggattaaagactattttcatgtggaaaatgtgataaagataaaaggtcaca---------tagactgtgagaaaaaata-tattgttttc-acaagttcttgtaaa-tatattcttaccctttttgtctaatgtctagctaaatatcaaa-------------gggccattgac------tatatacatatattagtttttgctgatgctatgaaaaagtctattgaattgtttcaa-ttaacaacatggcaaaaatattaaagcctttc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328194 361 + 4669795 attatagttcataattatttggtattaaaagatacct-aaaatgattttt---t------attcattccttttacatctatgaggc-----aaaa-cgacaatgcaaaattatataaatatgattttccaccagtaaaatttggattaaagactattttcatgtggaaaatgtgataaagataaaaggtcaca---------tagactgtgagaaaaaatg-ta---ttttc-acaagttcttgtaaa-tatattcttatcctttttgtctaatgggtagctaaatatcaaa-------------gggccattgac------tatatacatatattagtttttgctgatgctgtgaaaaagtctattgaattgtttcaa-ttaacaacatggcaaaaatattaaagcctttc i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2724613 364 - 2847728 attatagttcataattatttggtattaaaagatacct-aaaatgattttt---t------attcattccttttacatctatgaggc-----aaaa-cgacaatgcaaagttatataaatatgattttccaccagtaaaatttggattaaagactattttcatgtggaaaatgtgataaagataaaaggtcaca---------tagactgtgagaaaaaatg-tattgttttc-acaagttcttgtaaa-tatattcttatcctttttgtctaatgtgtagctaaatatcaaa-------------gggccattgac------tatatacatatattagtttttgctgatgctgtgaaaaagtctattgaattgtttcag-ttaacaacatggcaaaaatattaaagcctttc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 853648 365 + 2368649 attatagttcataattatttggtattaaaagatacct-aaaatgattttt---t------attcattccttttacatccatgaggc-----aaaa-cgacaatgcaaaattatataaatatgattttccaccagtaaaatttggattaaagactattttcatgtggaaaatgtgataaagataaaaggtcaca---------ttgactgtgagaaaaaatg-tattgttttc-acaagttcttataaattatagtcttatcctttttgtctaatgtgtagctaaatatcaaa-------------gggccattgac------tatatacatatattagtttttgctgatgctgtgaaaaagtctattgaattgtttcaa-ttaacaacatggcaaaaatattaaagcctttc i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86564023 339 - 129401213 ---------------------AGATGAAAAGATTCAGAATAACAATATCTTCAT------GTTCATTCCTTGTATATCAATGTGGG-----AAAAGAGATAATACaatatttttaaaatatttttatataCCAG-AAAAGTTAAAATAAAGACTCTTTTCATGTGT---ATGGCAGAAAACTCAAAATTTGCC---------CAGGCTTTCATAAAAAATATTATTTTATTC-ACA--TTCTGACTAA-AATATTCTTAACA-TTTTATATAAAATATAGTCACATATCAAAGTCAGGTATGATGGTACCAATAAT------TACAT--------------TTTTCGAGGC--TGAGAAAGGTTGCTGAATTGTTTTAG-CTAGTTAAATGGCAAGCATAGCAAAGACTCCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16931098 374 - 59632846 ATAGCATTTCATAATTTCTTTGTCTTAGAAGTGTTCTAAAAATAACAATA---TCCCCAGCTTCATCCCTTGTGTATCCATGAGGCAAGCAAAAC-AGACAGTGTGAAATTATTTAAATATCACAATGTACCAGTAGAATTTGAACAAAGGACTATCTTCATAGAGAAAACATAATAAAAATGTCAATTTCTACATTGACATTAGACTTTGAG-AAAAGTA-CATTGTTCTCTTCATGTTCT----GA-TAGAGTCCTCTCC-TTTTGTCTAAAATAGAGTTGAATTTCAAA-------------AGGCTATTGAC------AAT-TGCCTATTTTAT---TTACAGATAC--TTAAAAAG-CTATTGAAATGTTTCAGCCTAATGACTCAGTAAAAATAACAAAGGTTTTC i canFam3.chr16 C 0 I 51 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3910000 568 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=-4593.000000 s hg38.chr4_KI270789v1_alt 81274 4 + 205944 ACt--t s panTro5.chr4 192872915 4 + 194502333 aCA--t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756743 3 + 195804263 aCA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793168 3 + 4876863 aCA--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678893 3 + 115148730 ACA--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964272 4 + 190429646 aca--t i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294098 4 - 25927173 aca--t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328555 4 + 4669795 aca--t i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2724977 6 - 2847728 acattt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854013 5 + 2368649 aca-tt i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86564362 4 - 129401213 GTT--T i mm10.chr8 C 0 I 231 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3910000 568 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16931472 51 - 59632846 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1054572.000000 s hg38.chr4_KI270789v1_alt 81278 297 + 205944 tttt----ttttttttttttgagacagtctcactctgtcgcccaggctggagtgcagtggcccgatctcagctcagtgcaacctctgcctcccgggttcacgccattctcctgcctcagcctccaaagtagctgggattataggcacacaccaccatgcccagctaatttttgtgttttttgtagagatggggtttcaccatgatggccaggatggtctcaatctcctgacctcatgatcc-gcctgcctaggcctcccaaagtgctgggattacaggcgtgagccactgtgcccagccCTT s panTro5.chr4 192872919 297 + 194502333 tttt----ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcccgatctcagctcattgcaacctccgcctcccgggttcacgccattctcctgcctcagcctccaaagtagctgggattataggcacacaccaccatgcccagctaatttttgtgttttttgtggagatggggtttcaccacggtggccaagatggtctcgatctccttacctcacgatct-gcctgcctaggcctcccaaagtgctgggattacaggcgtgagccaccttgcccagccCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192756746 296 + 195804263 -ttt----ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcccgatctcagctcattgcaacctccgcctcccgggttcacgccattctcctgcctcagcctccaaagtagctgggattataggcacacaccaccatgcccagctaatttttgtgttttttgtggagatggggtttcaccacggtggccaagatggtctcgatctccttacctcacgatct-gcctgcctaggcctcccaaagtgctgggattacaggcgtgagccaccttgcccagccCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793171 295 + 4876863 ---t----ttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggcccgatctcagctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctccaaagtagctgggattataggcacacaccaccatgcccagctaatttttgtgttttttgtagagatggggtttcaccatggtggccaagatggtctcgatctccttacctcatgatttgggaggcctaggcctcccaaagtgctgggattacaggcgtgagccaccgtgcccagccCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112678896 292 + 115148730 --------TGttttttttgaggcagagtctctctctgtcgcccaggctggagcgcagtggcccaatctcagctcactgtaacctctgcctcccgggttcacgccactctcctgcctcagcctcccgagtagctgggattataggcacacaccaccatgcccagctaatttttgtattttttgtagagatggggtttcaccatgatggccaagatggtct-gatctcctgaccttgtgatcc-gcccgccttggcctcccaaagtgctgggattacaggcgtgagccaccctgcccACCCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964276 300 + 190429646 ttttttg-ttttgtttttgagacacagtctcactctgttgcccaggctggagtgcagtggcccaatctcagttcactgcaacctctgcctcccaggttcaggagattctcttgcgtcagcctcccaagtagctgggactacaggcacacaccaccatgcctagctaatttttgtctttttagtagagatgaggttacaccatgatggacaggatggtctcgatctcccgacctcatgatcc-gcccacctcggcctcccatagtgctgggattacaggtgtgagccaccgcgcctggccCTT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294102 300 - 25927173 ttttttg-ttttgtttttgagacacagtctcactctgttgcccaggctggagtgcagtggccccatctcagctcactgcaacctctgcctcccaggttcaggagattctcttgcgtcagcctcccaagtagctgggactacaggcacacaccaccatgcctagctaatttttgtctttttagtagagatgaggttacaccatgatggacaggatggtctcgatctcccgacctcatgatcc-gcccacctcggcctcccatagtgctgggattacaggtgtgagccaccgcgcctggccCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328559 301 + 4669795 ttttttgattttgtttttgagacagagtctcgctctgttgcccaggctggagtgcagtggcccaatctcagctcactgcaacctccgcctcccaggttcaggagattctcttgcgtcagcctcccaagtagctgggactacaggcacacaccaccatgcccagctaatttttgtatttttagtagagatgaggttacaccatgatggccaggatggtctcggtctcctgacctcgtgatcc-gcccgcctcggcctcccatagtactgggattacaggtgtgagccaccgcgcccggccCTT i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2724983 300 - 2847728 ttttttg-ttttgtttttgagacagagtctcgctctgttgcccaggctggaatgcagtggcccaatcttagctcactgcaacctccgcctcccaggttcaggagattctcttgcgtcagcctcccaagtagctgggactacaggcacacaccaccatgcccagctaatttttgtatttttagtagagatgaggttacaccatgatggccaggatggtctcaatctcctgacctcgtgatcc-gcccacctcggcctcccatagtgctgggattacaggtgtgagccaccgtgcctggccCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854018 291 + 2368649 ttttttg-ttttgtttttgagatagagtctcactctgttgcccaggctggagtgcagtggcccaatctcagctcactgcaacctccgcctcccaggttcaggagattctcttgtgtcagcctcccaagtagctgggactacaggcacacaccaccatgcccagctaatttttgtatttttagtagagatgaggttttaccat---------gatggtctcaatctcctgacctcatgatcc-gcccgcttcggcctcccatagtgctgggattacaggtgtgagccaccgcgcccggccCTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3910000 568 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16931472 51 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=835883.000000 s hg38.chr4_KI270789v1_alt 81575 196 + 205944 TCACATTTTATATCTTGTAATTCTCTATTCTGCTCTACACCATAGGGATGATCCTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAACTCAACAGCCCCTTCATCAT-CAAAGACTCGCCCTCTATCCGCATCTCATTCCTTGCTTCCGCCAATAATCTGACTAG s panTro5.chr4 192873216 196 + 194502333 TCACATTGTATATCTTGTAATTCTCTATTCTGCTCTACACCATAGGGATGATCCTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAACTCAACAGCCCCTTCATCAT-CAAAGACTCGCCCTCTATCCGCATCCCATTCCTTGCTTCCACCAATAATTTGACTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757042 196 + 195804263 TCACATTGTATATCTTGTAATTCTCTATTCTGCTCTACACCATAGGGATGATCCTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAACTCAACAGCCCCTTCATCAT-CAAAGACTCGCCCTCTATCCGCATCCCATTCCTTGCTTCCACCAATAATTTGACTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793466 196 + 4876863 TCACATTTTACATCTTGTAATTCTCTATTCTGCTCTACACCATAGGGATGATCCTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAACTTAACAGCCCCTTCATCAT-CAAAGACTCGCCCTCTATCCGCATCCCATTCCTTGCTTCCGCCAATAATTTGACTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679188 196 + 115148730 TCACGTTTTATATCTTGTAATTTCCTACTCTGCTCTACACCATAGGGATGATCCTTCCAAA-AGCATCCTATTTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAATTCAACAGCCCCTTCATCAT-CAAAGACTCGCCCTCTATCCGCATCCCATTCCTTGCTTCCGCCAATAATTTGACTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964576 196 + 190429646 TCACGTTTTATATCTTGTAATTCTCTACTCTGCTCTACACCACAAGGAGGATCTTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTACCAAATTCAACAGCCCCTTCATCAT-CAAACACTCGCCCTCTATCCGCATCCCATTCCTTGTTTCTGCCAATAATTTGACTAG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294402 196 - 25927173 TCACGTTTTATATCTTGTAATTCTCTACTCTGCTCTACACCATAAGGAGGATCTTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTACCAAATTCAACAGCCCCTTCATCAT-CAAACACTCGCCCTCTATCCGCATCCCATTCCTTGTTTCTGCCAATAATTTGACTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3328860 196 + 4669795 TCACATTTTATATCTTGTAATTCTCTACTCTGCTCTACACCATAAGGAGGATCTTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTACCAAATTCAACAGCCCCTTCATCAT-CAAACACTCGCCCTCTATCTGCATCCCATTCCTTGCTTCCGCCAATAATTTGACTAG i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725283 196 - 2847728 TCACATTTTATATCTTGTAATTCTCTACTCTGCTTTACACCATAAGGAGGATCTTTCCAAA-AGCATCCTGTCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTACCAAATTCAACAGCCCCTTCATCAT-CAAACACTCGCCCTCTATCGGCATCCCATTCCTTGCTTCCGCCAATAATTTGACTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854309 196 + 2368649 TCACATTTTATATCTTGTAATTCTCTACTTTGCTCTACACCATACGGAGGATCTTTCCAAA-AGCATCCTATCTAGATTCTGCTGTTAAATCACCTT-TGTT--GGCCTGGCCAGTTATCAAATTCAACAGCCCAGTCATCAT-CAAACACTCGCCCTCTATCCGCATCCCATTCCATGTTTCTGCCAATAATTTGACTAG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16931523 192 - 59632846 TCATATTT---------TTATTTTTTACTATGTTCTACACCGTAAAGGGTATTTATACAGATTGCATCTTATCTGGATCCTCTTGTTTACTTTTTTTCTGTTTGGATTTGGCCAGTTATCAAATTTAGTAGCCACTTGACTATCCAAAGACTTGCACTACATCAGTATTCCATTCTATGTCACCAGTGATAATTTGACTAC i canFam3.chr16 I 51 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3910000 568 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=6006.000000 s hg38.chr4_KI270789v1_alt 81771 1 + 205944 T s panTro5.chr4 192873412 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757238 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793662 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679384 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964772 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294598 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329056 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725479 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854505 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3910568 1 + 3993831 T i proCoq1.NW_012145301v1 I 568 C 0 s canFam3.chr16 16931715 1 - 59632846 T i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e saiBol1.JH378165 13075200 1565 - 14256875 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=39582.000000 s hg38.chr4_KI270789v1_alt 81772 8 + 205944 AAAGAAGT s panTro5.chr4 192873413 8 + 194502333 AAAGAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757239 8 + 195804263 AAAGAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793663 8 + 4876863 AAAGAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679385 8 + 115148730 AAAGAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964773 8 + 190429646 AAAGATGT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294599 8 - 25927173 AAAGATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329057 8 + 4669795 AAAGATGT i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725480 8 - 2847728 AAAGATGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854506 8 + 2368649 AAAGATGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13076765 8 - 14256875 AAAGATAC i saiBol1.JH378165 I 1565 C 0 s proCoq1.NW_012145301v1 3910569 8 + 3993831 AAAGACGC i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16931716 8 - 59632846 CAAAATGC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3365093 1494 - 5030052 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=229169.000000 s hg38.chr4_KI270789v1_alt 81780 29 + 205944 CACTGCATGCCACAAATTGTCAGTGCTGA s panTro5.chr4 192873421 29 + 194502333 CACTGCATGCCACAAATTGTCAGTGCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757247 29 + 195804263 CACTGCATGCCACAAATTGTCAGTGCTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793671 29 + 4876863 CATTGCATGCCACAAATTGTCAGTGCTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679393 29 + 115148730 CACTGCATGCCACAAATTGTCAGTGCTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964781 29 + 190429646 CACTGCATGCCACAAATTGTCAGTGCTGA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294607 29 - 25927173 CACTGCATGCCACAAATTGTCAGTGCTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329065 29 + 4669795 CACTGCATGCCACAAATTGTCAGTGCTGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725488 29 - 2847728 CACTGCACGCCACAAATTGTCAGTGCTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854514 29 + 2368649 CACTGCATGCCACAAATTGTCAGTGCTGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13076773 29 - 14256875 CACTGCATGCCACAAATTGTCAGTGCTAA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3366587 29 - 5030052 CACTGCATGCAACAAATTGTCAGTGCTGA i aotNan1.NW_018492112v1 I 1494 C 0 s proCoq1.NW_012145301v1 3910577 29 + 3993831 CACTGCATGCCACAAATTGTCGGTGTTGA i proCoq1.NW_012145301v1 C 0 I 62 s canFam3.chr16 16931724 29 - 59632846 CACCGCATGCCACAAATTGTCATTTTTCA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=349532.000000 s hg38.chr4_KI270789v1_alt 81809 58 + 205944 ---CTTCCTCAACAAGGAAGTTATTTATTTACTTATTTAATATATGAGTGACTCAGATGCA s panTro5.chr4 192873450 58 + 194502333 ---CTTCCTCAACAAGGAAGTTATTTATTTACTTATTTAATATATGAGTGACTCAGATGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757276 58 + 195804263 ---CTTCCTCAACAAGGAAGTTATTTATTTACTTATGTAATATATGAGTGACTCAGATGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793700 58 + 4876863 ---CTTCCTCAACAAGGAAGTTATTTATTTACTTATTTAATATATGAGTGACTCAGATGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679422 58 + 115148730 ---CTTCCTCAACAAGGAAGTTATTTATTTACTTGTGTAATATATGAGTGACTCAGATGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964810 58 + 190429646 ---CTTCCTCAACAAGGAAGTTATTTATATACTTATTTAATATATGAGTGACTCAGATGCA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294636 57 - 25927173 ---CTTCCTCAACAAGG-AGTTATTTATATACTTATTTAATATATGAGTGACTCAGATGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329094 58 + 4669795 ---CTTCCTCAACAAGGAAGTTATTTATATACTTATTTAATATATGAGTGACTCAGATGCA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725517 58 - 2847728 ---CTTCCTCAACAAAGAAGTTATTTATATGCTTATTTAATATATGAGTGACTCAGATGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854543 58 + 2368649 ---CTTCCTCAACAAGGACGTTATTTATATACTTATTTAATATATGAGTGACTCAGATGCA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13076802 58 - 14256875 ---CTTCCTCAACAAGGAAGTTATTTATGTATTTATTTAATATATAAGTGACTCAGATGCA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3366616 58 - 5030052 ---CTTCCTCAACAAGGAAGTTATTTATGTATTTATTTAATATATGAGTGACTCAGATGCA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16931753 60 - 59632846 AAGACTCCTCAG-GGGGGCATCATCCATATGCTTACTTAATATGTAAGTATTCTAGATTCA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e proCoq1.NW_012145301v1 3910606 62 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1836982.000000 s hg38.chr4_KI270789v1_alt 81867 304 + 205944 -AATTCCATCTTGAGAATACCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatagttc-------------aaataaacagaac---gtaatagagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCATAAGGCTGGAATTGTGAGAGTCTATCCAGGAGTAGCTGAATTTGCAGAGGAATGCAGCTGTC--CACAGAAAAACAATGGCAAAGGAGCAATGC s panTro5.chr4 192873508 304 + 194502333 -AATTCCATCTTGAGAATACCAACTCCTGATGCCAACTGAT--TGtcagtcatggctacaacaggagactggattcactcaaatagttc-------------aaataaacagaac---gtaatagagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCATAAGGCCGGAATTGTGAGAGTCTATCCAGGAGTAGCTGAATTTGCAGAGGAATGCAGCTGTC--CACAGAGAAACAATGGCAAAGGAGCAATGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757334 304 + 195804263 -AATTCCATCTTGAGAATACCAACTCCTGATGCCAACTGAT--TGtcagtcatggctacaacaggagactggattcactcaaatagttc-------------aaataaacagaac---gtaatagagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcattgacagcATGTGGAAATAGAATT---ACTGAAGTTCCATAAGGCCGGAATTGTGAGAGTCTATCCAGGAGTAGCTGAATTTGCAGAGGAATGCAGCTGTC--CACAGAGAAACAATGGCAAAGGAGCAATGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3793758 304 + 4876863 -AATTCCATCTTGAGAATACCAACTCCTGATGCCAACTGAC--TGtcagtcatggctacaacaggagactggattcactcaaatagttc-------------aaataaacagaac---gtaatagagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCATAAGGCCAGAATTGTGAGAGTCTATCCAGGAGTAGCTGAATTTGCAGAGGAATGCAGCTGTC--CACAGAGAAACAATGGCAAAGGAGCAATGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679480 304 + 115148730 -AATTCCATCTTGAGAATACCAACTCCTGATGCCAACTGAT--TGtcagtcatggctacaacaggagactggattcactcaaatagttt-------------aaataaacagaac---gtaataaagggactacttacaaaagtgaagcagggttgaggaaag-acacaggggatgctgagttactca--------------------------gagctgcagtgacagcATGCGGAAATACAATT---ACTGAAGTTCCATAAGGCTGGAATTGTGAGAGTCTATCCAGGAATAGCTGAATTTGCAGAGGAATGCAGCTGTC--CAAAGAGAAACAATGGCAAAGGAGCAATGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188964868 303 + 190429646 -AATTCCATCTGGAGAATAGCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatagttc--------------aataaagagaat---gtaataaaggcactacttacagaagtgaagcagggttgaggaaag-acacaggggaggttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCACAAGGCCGGAATTGTGAGGGTCTACCCAGGAGTACCTGAATTAGCAGAGGGATGCAGCTGTC--CACAGAGAAACAATGGCAGAGGAGCAATGG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294693 303 - 25927173 -AATTCCATCTGGAGAATAGCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatagttc--------------aataaagagaat---gtaataaagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCACAAGGCCGGAATTGTGAGGGTCTACCCAGGAGTACCTGAATTAGCAGAGGGATGCAGCTGTC--CACAGAGAAACAATGGCAGAGGAGCAATGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329152 301 + 4669795 -AATTCCATCTGGAGAATACCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatagttt--------------aataaagagaat---gtaataaagggactacttacagaagtgaagcagggttgaggaaag-acac--gggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCATGAGGCCGGAATTGTGAGGGTCTATCCAGGAGTACCTGAATTAGCAGAGGGATGCAGCTGTC--CACAGAGAAGCAATGGCAAAGGAGCAATGG i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2725575 301 - 2847728 -GATTCCATCTGGAGAATACCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatagttc--------------aataaagagaat---gtaataaagggactacttacagaagtgaagcagggttgaggaaag-acac--gggatgttgagctactca--------------------------gagctgcagtgacagcATGTGGAAATAGAATT---ACTGAAGTTCCCTGAGGCCGGAATTGTGAGGGTCTATCCAGGAGTACCTGAATTAGCAGAGGGATGCAGCTGTC--CACAGAGAAGCAATGGCAAAGGAGCAGTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854601 317 + 2368649 -AATTCCATCTGGAGAATACCAACTCCTGATGCCAACTGAT--tgtcagtcatggctacaacaggagactggattcactcaaatatttttttttgtagccaaaaataaagagaac---gtaataaagggactacttacagaagtgaagcagggttgaggaaag-acacaggggatgttgagctactca--------------------------gagctgcagtgacagcaTGTGGAAATAGAATT---ACTGAAGTTCCGTAAGGCCAGAATTGTGAGGGTCTATCCAGGAGTACCTGAATTAGCAGAGGAATGCAGCTGTC--CACAGAGAAACAATGGCAAAGAAGCAATGG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13076860 296 - 14256875 -AATTTCATCTTGAGAATACCAACTCCTGTTGGCAACTCCTGATGTCCGCTGTGGCTACAACAGAAGACTGAATTCACTCAAATAGTTT-------------AAATCAAGAGAAA---GTAATATAAGGACTACTTACAGAAGTGAAGCAGGGTT-----------------------------------GAATAGTAACGGTGACCACCACTTGAGCTGCGGTGACAG-GTGTGGAAGTAGAATT---GCTTAAATTCCCTAAGGCCAGAATTGTGAGAAGCTATCCAGAA-TAGCTGAATTTGCAGAGGAATGCAGCTGTC--CGCAGGGAAACATTGGCAAAGGAGCAATGG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3366674 323 - 5030052 -AATTCCATCCTGGGAATACCAACTCCTGATGGCAAATCCTGATGTCCATTGTGGCT---Acaggagactgaattcactcaaatagttt-------------aaattaagagaag---gtaatgtaaagactagttacagaagtgaagcagcgttgaggaaagcaaacaggggatgttgagctactcagagaatagtaacggtgaccaccacttgagctgcagtgacaG-GTGTGGAAACAGAATT---GCTTCAGTTCCCTAAGGCTGGAATTATGAGAGGCT-TAGGGAA-----TGAATTTGCAGAGGAATGCAGCTGTC--CACAGGGAAACAATGGCAAAGGAGCAATGG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3910668 329 + 3993831 -AATTCCACATTGAGAACACCAACTCCTGGTGCTGACTATT--TGttagtcatggctacaacgggagactgaattcactcaaatagttt-------------aaagaaagagaat---ttaataaagggtctacttacagaagtgagacagggttaagaaaac-aaacaggggatgctgaattacccagagactggtaacagctaccactacttgtgctgaagcgacaacatgtggaaatagtatt---actgaggttttatgaggctgtaattgtgagagaTTATC-AGGAATAGCTGAATTTGTAGAGTAATGCAGCTGTC--CACAAAGAAACAATGTTAAAGCAGGAAGGG i proCoq1.NW_012145301v1 I 62 C 0 s canFam3.chr16 16931813 318 - 59632846 GAGTTCTATCTTGGGTATAGCCACTCTTGGTACCAAATACT--TGTCATTT---GGTACAAGAGTAGATGAAATTCACTCAG--AGTTT-------------GAATATCGATAATTAAttaataaagagactatttacagaagtgaggcaagttttaaggaac-aaacaagggatatcaagtcacccataaactagtaacagttaccactccttgtgctaaagggactacatggagaaatggtgttaccactgaagccccatgaggctgggattgtgagga---------gaggctctgg----gtagagcaatgcagccaACCTCGCAGAGAAACAATGGT-GAGGTGTTTT-- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e chlSab2.chr7 134287753 0 + 135778131 C e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1098501.000000 s hg38.chr4_KI270789v1_alt 82171 143 + 205944 AGCAGAGAAGACATAGTC-TAATTTCTCTTTACTTTCTACTGT--------ATGATATGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACATACAGAAAGGAAAACCAAAAGATAAGCTTTATGTTTTAAAATCTCCACTCAAGATGCAG s panTro5.chr4 192873812 143 + 194502333 AGCAGAGAAGACATTGTC-TAATTTCGCTTTACTTTCTACTGT--------ATGATATGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACATACAGAAAGGAAAACCAAAAGATAGGCTTTAGGTTTTGAAATCTCCACTCAAGATGCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757638 143 + 195804263 AGCAGAGAAGACATTGTC-TAATTTCGCTTTACTTTCTACTGT--------ATGATATGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACATACAGAAAGGAAAACCAAAAGATAGGCTTTAGGTTTTGAAATCTCCACTCAAGATGCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794062 143 + 4876863 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGT--------ATGATATGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACATACAGAAAGGAAAACCAAAAGATAAGCTTTAGGTTTTAGAATCTCCACTCAAGATGCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679784 143 + 115148730 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGT--------ATGATATGGTAGCAGGCTTGCTTTTGGCTGTGCTGGAAAACATACAGAAAGGAAAACCAAAAGATAAGTTTTAGGTTTTAAAATCTCCACTCAAGATGCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965171 143 + 190429646 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGC--------ATGATGTGGTAGAAGGCTTGCTTTTGGCTATGCTGGAAAACATATAGAAAGGAAAACCAAAAGGTAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24294996 143 - 25927173 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTAC--------ATGATGTAGTAGAAGGCTTGCTTTTGGCTATGCTGGAAAACATATAGAAAGGAAAACCAAAAGGTAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329453 143 + 4669795 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGC--------ATGATGTGGTAGAAGGCTTGCTTTTGGCTGTGCTGGGAAACATATAGAAAGGAAAACCAAAATATAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287753 140 + 135778131 AGCAGAGAAGACA---TC-TAATTTCTCTTTACTTTCTACTGC--------ATGATGTGGTAGAAGGCTTGCTTTTGGCTATGCTGGAAAACATACAGAAAGGAAAACCAAAAAATAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2725876 143 - 2847728 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGC--------GTGATGTGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACAGATAGAAAGGAAAACCAAAAGATAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 854918 143 + 2368649 AGCAGAGAAGACATCGTC-TAATTTCTCTTTACTTTCTACTGC--------ATGATGTGGTAGAAGGCTTGCTTTTGGCTGTGCTGGAAAACGTACAGAAAGCAAAACCAAAAGATAAGCTTTAGGATTTAAAATCTCCACTCAAGATGCAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13077156 143 - 14256875 AGCAGAAAAGAGACAGTC-TGGTTTTCCTTTACTTTCTACCTT--------ATTATATGGTAGAAGACTTGCTTTTGGCTGTGCTGGGAAACGTACAGAAAGGAACACCGAAAGATAAGCTTTAGGTTTTAAAATCTCAACTCAAGATGCAG i saiBol1.JH378165 C 0 I 3077 s aotNan1.NW_018492112v1 3366997 143 - 5030052 AGCAGAGAAGACACAGTC-TGGTTTTTCTTTACTTTCTACCTT--------ATTATATGGTAGAAGACTTGCTTTTGGCTGTGCTGGCAAACGTACAGAAAGGAAAACCGAAAGATAAGCTTTAGGTTTTAAAATCTCAACTCAAGATGCAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3910997 134 + 3993831 GGCAGAG---------TC-TGATTTCTCTTTGCTATCTACTAT--------GTTATGTGGTAGAATGCTTGATTTTGGCTATGCTGGCAAACGTACAGAAAAGAAAACTAAAAGATAAACTTTAGACTTTTAAATCTCAACTCAAGGTGCGG i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16932131 141 - 59632846 AAGAGAGAAGACAGAGCCTTGATCTGTCTCTACTTCCAATGGTGGTTACAAATATTATGGGCTGATAC-TGCTTTTGGCTGTGCTGGGGAACATACAGAAAGCAAA----------AAGCTTTAGAGTTTGAAATCTCAACTCAAGGCACAG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=159346.000000 s hg38.chr4_KI270789v1_alt 82314 23 + 205944 GTGGA-AAATTAGAAAGCCACTGT s panTro5.chr4 192873955 23 + 194502333 GTGGA-AAATTAGAAAGCCACTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757781 23 + 195804263 GTGGA-AAATTAGAAAGCCACTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794205 23 + 4876863 GTGGA-AAATTAGAAAGCCACTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679927 23 + 115148730 GTGGA-AAATTAGAAAGCTACTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965314 23 + 190429646 GTGGA-AAATTAGAAAGCCACTGT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295139 23 - 25927173 GTGAA-AAATTAGAAAGCCACTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329596 23 + 4669795 GTGGA-AAATTAGAAAGCCACTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287893 23 + 135778131 GTGGA-AAATTAGAAAGCCACTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726019 23 - 2847728 GTGGA-AAATTAGAAAGCCACTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855061 23 + 2368649 GTGGA-AAATTAGAAAGCCACTGT i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3367140 23 - 5030052 ATGGA-AAATTAGAAAGCCGCTGT i aotNan1.NW_018492112v1 C 0 I 291 s proCoq1.NW_012145301v1 3911131 23 + 3993831 ATAGA-AAATCAGAAAGCTTCTAT i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16932272 24 - 59632846 GTGGACAAGCCCCCAAACTACTGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=75983.000000 s hg38.chr4_KI270789v1_alt 82337 12 + 205944 GGTGATGTTAAA s panTro5.chr4 192873978 12 + 194502333 GGTGATGTTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757804 12 + 195804263 GGTGATGTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794228 12 + 4876863 GGTGAAGTTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679950 12 + 115148730 GGTGATCTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965337 12 + 190429646 GGTGATCTTAAA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295162 12 - 25927173 GGTGATCTTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329619 12 + 4669795 GGTGATCTTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287916 12 + 135778131 GGTGATCTTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726042 12 - 2847728 GGTGATCTTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855084 12 + 2368649 GGTGATCTTAAA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3911154 12 + 3993831 GGTGATCTTAAA i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16932296 12 - 59632846 GGTGACCTTAAA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 970341 3236 - 2196201 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367163 291 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=118013.000000 s hg38.chr4_KI270789v1_alt 82349 18 + 205944 ATATATCTTGTATGTCTG s panTro5.chr4 192873990 18 + 194502333 ATATATCTTGTGTATCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757816 18 + 195804263 ATATATCTTGTGTATCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794240 18 + 4876863 ATCTATCTTGTATATCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679962 18 + 115148730 ATATATCTTGTATATCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965349 18 + 190429646 AGATATGTTGTATATCTG i rheMac8.chr5 C 0 I 1 s macNem1.NW_012013133v1 24295174 18 - 25927173 AGATATGTTGTATATCTG i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3329631 18 + 4669795 AGATACCTTGTATATCTG i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134287928 18 + 135778131 AGATATCTTGTATATCTG i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2726054 18 - 2847728 AGATATCTTATATATCTG i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 855096 18 + 2368649 AGATATCTTGTATATCTG i colAng1.NW_012116221v1 C 0 I 1 s cebCap1.NW_016107886v1 973577 18 - 2196201 ATATACCTTGTATATCTG i cebCap1.NW_016107886v1 I 3236 I 1 s proCoq1.NW_012145301v1 3911166 18 + 3993831 AGATATCTTGTATATCTG i proCoq1.NW_012145301v1 C 0 I 1 s canFam3.chr16 16932308 18 - 59632846 AGATGCCTTGCATATCCA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367163 291 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=338191.000000 s hg38.chr4_KI270789v1_alt 82367 42 + 205944 -AAGTCAGCTACACAAAGGAGAAAACATCAAAACTAATTGCAT s panTro5.chr4 192874008 42 + 194502333 -AAGTCAGCTACACAAGGGAGAAAACATCAAAACTAATTGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757834 42 + 195804263 -AAGTCAGCTACACAAGGGAGAAAACATCAAAACTAATTGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794258 42 + 4876863 -AAGTCAGCTACACAAAGGAGAAAACATCAAAACTAATTGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112679980 42 + 115148730 -AAGTCAGCTACACAAAGGAGAAAACATCAAAACTAACTGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965368 42 + 190429646 -AAGTCAGCTACACAAAGGAGAAAACATCAAAACTAATTGCAT i rheMac8.chr5 I 1 C 0 s macNem1.NW_012013133v1 24295193 42 - 25927173 -AAGTCAGCTACACAAAGGAGAAAACATCAAAACTAATTGCAT i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3329650 42 + 4669795 -AAATCAGCTACACAAAGGAGAAAACATCAAAACTAGTTACAT i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134287947 42 + 135778131 -AAGTCAGCTGCACAAAGGAGAAAACATCAAAACTAATTGCAT i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2726073 42 - 2847728 -AAATCAGCTACACAAAGGAGAAAACATCAAAACTAATTACAT i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 855115 42 + 2368649 -AAGTCAGCTACATAAAGGAGAAAACATCAAAACTAATTGCAT i colAng1.NW_012116221v1 I 1 C 0 s cebCap1.NW_016107886v1 973596 41 - 2196201 -AAGCCAGCCACACAAAGGAGAAAGCATCAAAACTAACTTC-T i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3367454 41 - 5030052 -AAGTCAGCTACACAAAGGAGAAAGCATCAAAACTAACTGC-T i aotNan1.NW_018492112v1 I 291 C 0 s proCoq1.NW_012145301v1 3911185 42 + 3993831 -AAGTCAACTATACAAAGGAGAAAGCATCGAAACTAATTGCAT i proCoq1.NW_012145301v1 I 1 I 74 s canFam3.chr16 16932326 43 - 59632846 AAAGTAAGCTACATATAGAATAAGTCCTGAAAACTAATTTCAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=504251.000000 s hg38.chr4_KI270789v1_alt 82409 80 + 205944 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATCGATTCAGTTTGGCAATGGCTGAGCAACTAACTGACTGT s panTro5.chr4 192874050 76 + 194502333 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGATTCAGTTTGGCAATGGCTGAGC----AACTGATTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757876 76 + 195804263 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGATTCAGTTTGGCAATGGCTGAGC----AACTGATTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794300 76 + 4876863 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGATTCCGTTTGGCAATGGCTGAGC----AACTGATTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680022 76 + 115148730 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGATTCAGTTTGGCAATGGCTGAGC----AACTGATTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965410 76 + 190429646 TGATTGTGTCGTTTCAGTACCTGTTAAATGCGTAATTCCATTGATTTAGTTTGGCAATGGCTGAGC----AACTGATTAT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295235 76 - 25927173 TGATTGTGTTGTTTCAGTACCTGTTAAATGCGTAATTCCATTGATTTAGTTTGGCAATGGCTGAGC----AACTGATTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329692 76 + 4669795 TGATTGTGTAGTTTCGATACCTGTTAAATGCATAATTCCATTGATTTAGTTTGGCAATGGCTGAGC----AACTGATTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134287989 76 + 135778131 TGATTGTGTAGTTTCGGTACCTGTTAAATGCATAATTCCACTGATTTAGTTTGGCAATGGCTGAGC----AACTGGTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726115 76 - 2847728 TGATTGTGTAGTTTCGATACCTGTTAAATGCATAATTCCATTGATTTAGTTTGGCAATGGCTGAGC----AACTGATTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855157 76 + 2368649 TGATTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGATTTAGTTTGGCAATGGCTGAGC----AACTGATTAT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 973637 70 - 2196201 TGACTGTGTAGTTTCAGTACCTGTTAAAGGCATAATTCCATTGA------CTGGCAGCAGCTGGGC----AACTGATTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3367495 70 - 5030052 TGACTGTGTAGTTTCAGTACCTGTTAAATGCATAATTCCATTGA------TTGGCAGCAGCAGAGC----AGCTGATTGT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16932369 76 - 59632846 GGATTGCATAATTGTAGAATGTGTTCAATGCATAATGTCACTGACTCCATTTGGATGGAGTCAGAC----AACGGATTGA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3911227 74 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=420954.000000 s hg38.chr4_KI270789v1_alt 82489 55 + 205944 AAAGGAAAAGGACCCTAAGATTTAGTATGGCAAACCGAGATAAAGTTAAGAAATT s panTro5.chr4 192874126 55 + 194502333 AAAGGAAAAGGACCCTAAGATTTAGTATGGCAAACCGAGATAAAGTTAAGAAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192757952 55 + 195804263 AAAGGAAAAGGACCCTAAGATTTAGTATGGCAAACCGAGATAAAGTTAAGAAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794376 55 + 4876863 AAAGGAAAAGGGCCCTAAGATTTAGTATGGCAAACCGAGATAAAGTTAAGAAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680098 55 + 115148730 AAAGGAAAAGGACCCTAAGATTTAGTATGGCAAACCGAGATAAATTTAAGAACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965486 54 + 190429646 AAAGGAAAGGGACCTTAAGATTTAGTATGGCAAACTGAGATAAAGTTAAGAAA-T i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295311 54 - 25927173 AAAGGAAAGGGACCTTAAGATTTAGTATGGCAAACTGAGATAAAGTTAAGAAA-T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329768 54 + 4669795 AAAGGAAAGGGACCCTAAGATTTAGCATGGCAAACCGAGATAAAGTTAAGAAA-T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288065 54 + 135778131 AAAGGAAAGGGACCCTAAGATTTAGTATGGCAAACCGAGATAAAGTTAAGAAA-T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726191 54 - 2847728 AAAGGAAAGGGACCCTAAGAGTTAGCATGGCAAACCGAGATAAAGTTAAGAAA-T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855233 54 + 2368649 AAAGGAAAGGGACCCTAAGATTTAGTATGGCAAACAGAGATAAAGTTAAGAAA-T i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 973707 54 - 2196201 AAAGAAAAAGGA-CCTATGATTTAGTATGGCAAACTGAGATAAAGTTAAGAAATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3367565 55 - 5030052 AAAGGAAAGGGACCCTAAGATTTAGTATGGCAAACTGAGATAAAGTTAGAAAATT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3911301 55 + 3993831 AAAGGAAAGGGACCCTAAGATTTAGTATGGCAGATGAAGATAAAGTTAAGAAATT i proCoq1.NW_012145301v1 I 74 I 2448 s canFam3.chr16 16932445 49 - 59632846 GAAGGAAAGGGACTC------TTTCCATGGCAGACGGAGATGAAGACAAGAAACT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=170494.000000 s hg38.chr4_KI270789v1_alt 82544 27 + 205944 CTAGCCCACCAATC------------TCCTGAAAGCTCT s panTro5.chr4 192874181 27 + 194502333 CTAGCCCACCAATC------------TCCTGAAAGCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758007 27 + 195804263 CTAGCCCACCAATC------------TCCTGAAAGCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794431 27 + 4876863 CTAGCCCACCAATC------------TCCTGAAAGCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680153 27 + 115148730 ATAGCCCACCAATC------------TCCTGAAAGCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965540 27 + 190429646 CTAGCCCACCAATC------------TCCTGAAAGCTCT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295365 27 - 25927173 CTAGCCCACCAATC------------TCCTGAAAGCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329822 27 + 4669795 CTAGCCCGCCAATC------------TCCTGAAAGTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288119 27 + 135778131 CTAGCCCACCTATC------------TCCTGAAAGCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726245 27 - 2847728 CTAGCCCGCCAATC------------TCCTGAAAGTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855287 27 + 2368649 CTAGCCCACCAATC------------TCCTGAAAGCTCT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 973761 27 - 2196201 CTAGCCCACACATC------------TCCTGAAAGCTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3367620 24 - 5030052 CTAGCCCACACAT---------------CTGAAAGCTCT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16932494 39 - 59632846 TGGGCCTTCAAATCCTTTGACTTGAGCCCTGATAGTCCT i canFam3.chr16 C 0 I 201 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=101826.000000 s hg38.chr4_KI270789v1_alt 82571 15 + 205944 TTGTAGCCAGAATCA s panTro5.chr4 192874208 15 + 194502333 TTGTAACCAGAATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758034 15 + 195804263 TTGTAACCAGAATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794458 15 + 4876863 TTGTAGCCAGAATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680180 15 + 115148730 TTGTAGCCAGAATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965567 15 + 190429646 TTGTAGCCAGAATCA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295392 15 - 25927173 TTGTAGCCAGAATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329849 15 + 4669795 TTGTAGCCAGAATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288146 15 + 135778131 TTGTAGCCAGAATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726272 15 - 2847728 TTGTAGCCAGAATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855314 15 + 2368649 TTGTAGCCAGAATCA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 973788 15 - 2196201 TGGTGGCCAGAATCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3367644 15 - 5030052 TGGTAGCCAGAATCA i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16932533 201 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1656822.000000 s hg38.chr4_KI270789v1_alt 82586 264 + 205944 CCTCTGCC--------TAAGTTGCTCTTGGCTTGAAGATCTGCTCTGAGAAGAGATACCATGTACGTCAATGGAACTACAAAATCTTGAAAACTTATGCGAGAAGGAAGCTGGAAAGCATAAAAAAAA-------------TTA--ATTCTTATAAAC--TTTTTTTTTCTGCCTTCTCTTCCCtctctagctataattttggatttgtctatttttattttcatttatatcaaatgttgtctcatatattttgaagctgttatgtgatg--cttgcatttaggattcttg s panTro5.chr4 192874223 266 + 194502333 CCTCTGCC--------TAAGTTGCTCTTGGCTTGAAGATCTGCTCTGAGAAGAGATACCATGTACGTCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGCTGGAAAGCATAAAAAAAA-------------TTA--ATTCTTTTAAACTTTTTTTTTTTCTGCCTTCTCTTCCCtctctagctctaattttggatttgtctatttttattttcatttatatcaaatgtcgtttcatatattttgaagctgttatgtgatg--cttgcatttaggattcttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758049 265 + 195804263 CCTCTGCC--------TAAGTTGCTCTTGGCTTGAAGATCTGCTCTGAGAAGAGATACCATGTACGTCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGCTGGAAAGCATAAAAAAAA-------------TTA--ATTCTTTTAAAC-TTTTTTTTTTCTGCCTTCTCTTCCCtctctagctctaattttggatttgtctatttttattttcatttatatcaaatgtcgtttcatatattttgaagctgttatgtgatg--cttgcatttaggattcttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794473 261 + 4876863 CCTCTGCC--------TAAGTTGCTCTTGGCTTGAAGATCTGCTCTGAGAAGAGATACCATGTACGTCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGCTGGAAAGCATAAAAAAAA-------------TTA--ATTCTTAAAAAC--TTTTTTTTTCTGCCTTCTCTT-CCtctccagctctaatttcggatttgtctattcttattttcatttatatc--atgttgtttcatatattttgaagctgttatgtgatg--cttgcatttaggattcttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680195 260 + 115148730 CCTCTGCC--------TAAGTTGTTCCTGGCTTGAAGATCTGCTCTGAGAAGAGATACCATGTACATCAATGGAACTACAAAATCTTGAGAACTTATGCCAGAAGGAAGCTGGAAAGCATAAAAAA-----------------A--ATGCTTACAAAC-TTTTTTTTTTCTGCCTTCTCTTACCtctctagctataattttggatttgtctatttttattttcatttatatcaaatgttgttt-atatattttgaagctattatgtgatg--cttgcatttaggattcttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965582 265 + 190429646 CCTCTGCC--------TAAATTGTTCTTGGCTTGAAGATCTGCTCTGGGAAGAGATACCATGTACATCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGTTGGAAAGCATAAAAGAAATATA---------TTA--ATTCTTCTTAAC--TGTTTTTTTCTGCATTCTCTGCCCTCTGTTGctataattttggatttgtctatttttattttcatttctatcaaat---gttttatatattttgaagctgttatgtgatg--cttgcatttaggattcttg i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295407 265 - 25927173 CCTCTGCC--------TAAATTGTTCTTGGCTTGAAGATCTGCTCTGGGAAGAGATACCATGTACATCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGTTGGAAAGCATAAAAGAAATATA---------TTA--ATTCTTCTTAAC--TGTTTTTTTCTGCATTCTCTGCCCTCTGTTGctataattttggatttgtctatttttattttcatttctatcaaat---gttttatatattttgaagctgttatgtgatg--cttgcatttaggattcttg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3329864 272 + 4669795 CCTCTGCC--------TAAGTTGTTCTTGGCTTGAAGATCTGCTCTGGGAAGAGATACCATGTACATCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGGAGTTGGAAAGCATAAAAGAAATACATTAATTCTTTTA--ATTCTTCTTAAC--TGTTTTTTTCTGCCTTCTCTGCCCTCTGTTGctataattctggatttgtc--tttttattttcatttctatcaaat---gttttatatattttgaagctgttatgtgatg--cttccatttaggattcttg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288161 265 + 135778131 CCTCTGCC--------TAAGTTGTTCTTGGCTTGAAGATCTGCTCTGGGAAGAGATACCATGTACATCGATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGTTGGAAAGCATAAAAGAAATACA---------TTT--ATTCTTCTTAAC--TGTTTTTTTCTGCCTTCTCTGCCCTCTGTTGctataattttggatttgtctatttttattttcatttctatcaaat---gttttatatattttgaagctgttacgtgatg--cttgcgtttaggattcttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726287 263 - 2847728 CCTCTGCC--------TAAGTTGTTCTTGGCTTGAAGATGTGCTCTGGGAAGAGATAGCATGTATATCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGGAGTTGGAAAGCATAAAAGAAATACA---------TTA--ATTCTTCTTAAC--TGTTTTTTTCTGCCTTCTCTGCCCTCTGTTGctataattctggatttgtc--ttcttcttttcatttctatcaaat---gttttatatattttgaagctgttatgtgatg--cttccatttaggattcttg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855329 264 + 2368649 CCTCTGCC--------TAAGTTGTTCTTGGCTTGAAGATCTGCTCTGGGAAGAGATACTATGTACATCAATGGAACTACAAAATCTTGAAAACTTATGCCAGAAGGAAGTTGGAAAGCATAAAAGAAATACA---------TTA--ATTCTTCTTAAC--TGTTTTTTTCTGCC-TCTCTGCCCTCTGTTGctataattttggatttgtctatttttattttcatttctatcaaat---gttttgtatattttgaagctgttatgtgatg--cttgcatttaggattcttg i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 973803 263 - 2196201 CCTCTGCC--------CAAGTTGTTCTTGGCTTGAAGACTGGCTCTGGGAAGAGTTCCCACGTACATCAATGGAACCACAAAATCTTGAGAAC--ATGCCAGAAGGAAGCTGGAAAGCATTAAACAAATACG---------TTA--ATTTGTATTAAC--TTTTTTTTTCT---TTCTCTGCCCtctctaggtataattttggatttgtctatttttactttcatttctatcaaatgttgtttgatatatttggaagctgttacgtggtg--cttgcacttaggactcttg i cebCap1.NW_016107886v1 C 0 I 2122 s aotNan1.NW_018492112v1 3367659 262 - 5030052 CCTCTGCC--------CACGTTGTTCTTGGCTTGAAGACTGGCTCTGGGAAGAGATTCCACGTACATCAATGGAACCACAAAATCTTGAGAAC--ATGCCAGAAGGAAGCTGGAAAGCGTTAAAGAAATATG---------TTA--ATTCGTATCAAC---TTTTTTTTCT---TTCTCTGCCCtctctaggtataattttggatttgtctatttgtactttcatttctatcaaatgtagtttgatatatttggaagctgttacgtggtg--cttgcacttgggattcttg i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16932734 266 - 59632846 CCCCTGCCTCTGTGTTTAAATCGCCCTTGGTTTGATGACGGGCTCTGGGAATAGATAATATGGACACCAATGGAACTACAAGGTCTTGAAAACTTATATTAGGAGGGAGCTGGAAATCATGAATAAAA-------------ATAACATTCTTACTGAG---TTTTCCCTTGGTCTTCCCTGCCTTC--------taattttgaatttatttatttctac-ttaagttctgtcaaattttgcttcctatgctttgatgctgttagttggtgtacacacagttaagacagtta i canFam3.chr16 I 201 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=85351.000000 s hg38.chr4_KI270789v1_alt 82850 14 + 205944 tgtcctct----tgatgc--- s panTro5.chr4 192874489 14 + 194502333 tgtcctct----tgatgc--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758314 14 + 195804263 tgtcctct----tgatgc--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794734 14 + 4876863 tgtcctct----tgatgc--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680455 14 + 115148730 tgtcctct----tgatgc--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965847 14 + 190429646 tgtcctct----tggtgc--- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295672 14 - 25927173 tgtcctct----tggtgc--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3330136 14 + 4669795 tgtcctct----tgatgc--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288426 14 + 135778131 tgtcctct----tgatgc--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726550 14 - 2847728 tgtcctct----tgatgc--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855593 14 + 2368649 tgtcctct----tgatgc--- i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3367921 14 - 5030052 tgtcctct----tgatgc--- i aotNan1.NW_018492112v1 C 0 I 2058 s canFam3.chr16 16933000 21 - 59632846 tgtcctctattatgataaacc i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=273892.000000 s hg38.chr4_KI270789v1_alt 82864 63 + 205944 attaac------accattataaaatggctttctgtaccctggcatccctctttttcctgatttaatatg s panTro5.chr4 192874503 63 + 194502333 attaac------accattataaaatggctttttgtaccctggcatccctctttttcctgatttaatatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758328 63 + 195804263 attaac------accattataaaatggctttttgtaccctggcatccctctttttcctgatttaatatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794748 63 + 4876863 attaac------accattataaaatggctttctgtaccctggcatccctctttttcctgatttaatatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680469 67 + 115148730 attaacac--ttaccattataaaatggctttctgtaccctggcatccctctttttcctgatttaatata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965861 66 + 190429646 attaacacttttacgattataaaatggctttctgtaccctggcatccctccttttcctgatttaat--- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295686 66 - 25927173 attaacacttttacgattataaaatggctttctgtaccctggcatccctccttttcctgatttaat--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3330150 66 + 4669795 attaacacttttacgattataaaatggctttctgtaccctgacatccctccttttcctgatttaat--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288440 66 + 135778131 attaacacttttatgattataaaatggctttctgtaccctggcatccctccttttcctgaTTTAAT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726564 66 - 2847728 attaacacttttacgattataaaatggctttctgtaccctgacatccctccttttcctgatttaat--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855607 66 + 2368649 attaacacttttacggttataaaatggctttctgtaccctggcatccctctttttcctgatttaat--- i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16933021 58 - 59632846 ------attatttttattatgaaatatctttat-----ctggtaacagtttcttttctttttaaaaata i canFam3.chr16 C 0 I 125 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1214697.000000 s hg38.chr4_KI270789v1_alt 82927 272 + 205944 cccacagtagatttcttattattagaacttatgtagtacatttttgttcttcctgttacttttaaagtgaatttcttttagatggaatgttgttgtgtctatg--aaaaa-acagtctatgttttaaaatttagtatttagactatttacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttccatatttttcttatttcttttgggtttccacctttttccatgttaattgaatattatt s panTro5.chr4 192874566 272 + 194502333 cccacagtagatttcttattattagaacttatgtagtacatttttgttcttcctgctacttttaaagtgaatttcttttagatagaatgttgttgtgtctatg--aaaaa-acagtctttgttttaaaatttagtatttagactatttacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcgttttctatttgttccatatttttcttatttcttttgggtttccacctttttccatgttaattgaatattatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758391 270 + 195804263 cccacagtagatttcttattattagaacttatgtagtacatttttgttcttcctgctacttttaaagtgaatttcttttagatagaatgttgttgtgtctatg--aaaaa---agtctttgttttaaaatttagtatttagactatttacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcgttttctatttgttccatatttttcttacttcttttgggtttccacctttttccatgttaattgaatattatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3794811 272 + 4876863 cccacagtagatttcttattattagaacttatgtagtacatttttgttcttcctgttacttttaaagtgaatttcttttagatggagtgttgttgtgtctatg--aaaaa-acagtctatgctttaaaatttagtatttagactatttacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcgttttctatttgttccatatttttcttattccttttgggtttccacctttttccatgttaattgaatattatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680536 273 + 115148730 cccacagtagatttcttattattagaacttatgtagtatatttttgttcttcctcttacttttaaagtgaatttcttttagatggaatgttgttgtgtctatg--aaaaaaaaaatctatcttttaaaatttagtatttagactatttacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcgttttctatttgttccatatttttcttatttcttttgggtttctatctttctccatgttaattgaatattatt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188965927 262 + 190429646 -------tagatttcttattattagaacttatgtagtacacttttgttcttcct----cttttaaagtgaatttcttttagatggaatgttgttgtgtctatg-aaaaaa-aaaatctatgttttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttcaatatttttcttatttcttttgggtgtccgccttttttcatgttaactgaatattatt i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24295752 267 - 25927173 -------tagatttcttattattagaacttacgtagtacacttttgttcttcctcttacttttaaagtgaatttcttttagatggaatgttgttgtgtctatgaaaaaaa-aaaatctatgttttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttcaatatttttcttatttcttttgggtgtccgccttttttcatgttaactgaatattatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3330216 265 + 4669795 -------tagatttcttattattagaacttatgtagtacatttttgttcttcctcttacttttaaagtgaatttcttttagatggaatgttgttgtgtctatg--aaaaa-aaaatctatgttttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttccatatttttcttatttcttttgggtgtccaccttttttcatgttgactgaatattatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288506 261 + 135778131 -------TAGATTTCTTATTATTAGAACTTATGTAGTACATTTTTGTTCTTCCTCTTACTTTTAAAGTGAATTTCTTTTATATGGAA---TGTTGTGTCTACG---AAAA-AAaatctatgttttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttccatatttttcttatttcttttgggtgtccaccttttttcatgttaactgaatactatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726630 262 - 2847728 -------tagatatcttatttttagaacttatgtagtacatttttgttcttcctcttacttttaaagtgaatttcttttagatggaa---tgttgtgtctatg--aaaaa-aaaatctacattttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttctatatttttcttatttcttttgggtgtccaccttttttcatgttgactgaatattatt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855673 262 + 2368649 -------taggtttcttattattagaacttatgtagtacatttttgttcttcctcttacttttaaagtgaatttcttttagatggaa---tgttgtgtctatg--aaaaa-aaaatctatgttttcaaatttagtatttagaatattcacctttaatgtaattatgggcatagtagggtttaaatctaccatcttgctattcattttctatttgttccatatttttcttatttcttttgggtgtccaccttttttcatgttaactgaatgttatt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16933079 125 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=411035.000000 s hg38.chr4_KI270789v1_alt 83199 88 + 205944 taatgtttgcacactatggccttattagctac------agctctttattttat-tttatagatgttgtttatgggtttacaatctttaactcata s panTro5.chr4 192874838 88 + 194502333 taatttttgcacactatggccttattagctac------agctctttattttat-tttatacatgttgtttttgggtttacaatctttaactcatc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758661 88 + 195804263 taatttttgcacactatggccttattagctac------agctctttattttat-tttatacatgttgtttttgggtttacaatctttaactcatc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3795083 88 + 4876863 taatgtttgcacactatggccttattagctac------agctatttattttat-tttatagatgttgtttttgggtttacaatctttaactcatc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680809 85 + 115148730 taatgtttgcacactatggccttattagctac------agctctttattttat-tttataga---tgtttttgggtttacaatgtttaactcatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188966189 88 + 190429646 taatgtttgtacattatggccttattagctac------agctctttattttat-tttataaatgttgtttttgggtttacaatctttaactcatc i rheMac8.chr5 C 0 I 324 s macNem1.NW_012013133v1 24296019 88 - 25927173 taatgtttgtacattatggccttattagctac------agctctttattttat-tttataaatgttgtttttgggtttacaatctttaactcatc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3330481 88 + 4669795 taatgtttgtacactatggccttattagctac------agctctttattttat-tttataaatgttgttttcgggtttacaatctttaactcatc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288767 88 + 135778131 taatgtttgtacactatggacttattagctac------agctctttgttttat-tttataaatgttgtttttgggtttacaatctttaactcatc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726892 88 - 2847728 taatgtttgtacactatggccttattagctac------agctctttattttat-tttataaatgttgtttttgggtttacaatctttaactcatc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 855935 88 + 2368649 taatgtttgtacactatggccttattagctac------agctctttattttat-tttataaatgttgtttttgggtttacaatctttaactcatc i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16933204 88 - 59632846 tgatgctaaaccactg-agccatctgggctaccctggtaacatttttcttgatattaatataccttctttatgattt----gtgcttatgtca-- i canFam3.chr16 I 125 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=2514199.000000 s hg38.chr4_KI270789v1_alt 83287 576 + 205944 acaatatactttcaaataatattttaccactttgcat-----ataagaccgttaaacagtgtactttctgtctcctgtccatttttaatttatcacaa-tgtaccttcaaat----catattatccattttgaaaataatataagaa-----acttaa-aacagtatgtgtccatttttctc-----ttttttggagaattaccatgcattttatttctgcatatgttataaatttcacattacattttcttcttgttttaaactgt----------taattttattctaaataa-tttttttaaatga-gaaaaaaaattgaatttacccccaaggta----gcattcttgtgttctatcttttttgcatattttaaatccaagtatctatttgatattattttcttttattataaataacttatttctgcatttattgtagtgt-aagtctgctgttgacaaattaccccagc-tttttttttctaaaaag---------tttatccttatttttgaatgatggttttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------tttaaatttttaaagtaaaattctaacaccttgttttt------gcttcatttctgataagctt s panTro5.chr4 192874926 577 + 194502333 acaatatactttcaaataatattttaccactttgcat-----ataagaccgtgaaacagtgtactttctgtctcctgtccatttttaatttatcacaa-tgtaccttcaaat----aatattatccattttgaaaataatataagaa-----acttaacaacagtatgcgtccatttttctc-----ttttttggagaattaccatgcatttcatttctgcatattttataaatttcacattacattttcttcttgctttaaactgt----------taattttattctaaataa-tttttttaaatga-ggaaaaaaattgaatttacccccaaggta----gcattcttgtgttctatcttttttgcatattttaaatccaagtatctatttgatattattttcttttattataaataatttatttctgcatttattgtagtgt-aagtctgctgttgacaaattaccccagc-tttttttttctaaaaag---------tttatccttatttttgaatgatggttttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------tttaaatttttaaagtaaaattctaacaccttgttttt------gcttcatttctgataaactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192758749 577 + 195804263 acaatatactttcaaataatattttaccactttgcat-----ataagaccgtgaaacagtgtactttctgtctcctgtccatttttaatttatcacaa-tgtaccttcaaat----aatattatccattttgaaaataatataagaa-----acttaacaacagtatgcgtccatttttctc-----ttttttggagaattaccatgcatttcatttctgcatattttataaatttcacattacattttcttcttgctttaaactgt----------taattttattctaaataa-tttttttaaatga-ggaaaaaaattgaatttacccccaaggta----gcattcttgtgttctatcttttttgcatattttaaatccaagtatctatttgatattattttcttttattataaataatttatttctgcatttattgtagtgt-aagtctgctgttgacaaattaccccagc-tttttttttctaaaaag---------tttatccttatttttgaatgatggttttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------tttaaatttttaaagtaaaattctaacaccttgttttt------gcttcatttctgataaactt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3795171 577 + 4876863 acaatatactttcaaataatattttaccactttgcat-----ataagaccattaaacagtgtactttctgtctcctgtccatttttaatttatcacaa-tgtaccttcaaat----aatattatccattttgaaaataacataagaa-----acttac-aacagtatgcgtccatttttctc-----ttttttggagaattaccatgcattttatttctgcatatgtaataaatttcacattacattttcttcttgttttaaactgt----------taattttattctaaataatttttttttaatga-gaaaaaaaattgaatttacccccaaggta----gcattcttgtgttctatcttttttgcatattttaaatccaagtatctatttgatattattttcttttattataaataacttatttctacatttattgtagtgt-aagtctgctgttgacaaattaccccagc-ttttcttttctaaaaag---------tttatccttatttttgaatgatggttttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------tttaaatttttaaagtaaaattctaacaccttgttttt------gcttcatttctgataagctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112680894 580 + 115148730 acaatgtactttcaaataatattttaccactttgtatataacataagaccattaaacagtgtactttctgtctcctgtccatttttaatttatcacaa-tgtaccttcaaat----aatattatccattttggaaataatataagaa-----acttaa-aacagtatgcttccatttttctc-----tttttttgagaattaccatgcattttatttctgcatatgttacaaatttcagattacactttcttcttgctttaaactgt----------taattttattctaaata--tttttttaaatga-g-aaaaaaattgaatttacccccaaggtaacttacattcttgtgt----tcttttttgtgtattataaatccaagtatctatttgatactattttcttttattataaataacttatttctgcatttattgtagtgt-aagtctgctgttgacaaattaccccagcttttttttttctaaaaag---------tgtatcctcatttttgaatgatggttttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------tttaaatttttaaagtaaaattctaacaccttggtttt------gcttcatttctgatgagttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188966601 583 + 190429646 acaatatactttcaaataatattttaccaatttgcac-----ataagaccattaaacagtgtactttctgtctcctgcccattcttaatttatcacaa-tgtaccttcaaat----agtattacccattttgaaaataat-taagaa-----atttat---gagtatgtttccatttttctcttatctttttttgagaattaccatgcattttatttctgcatatgttataaatttcacattagatttttgtcttgcttt-aactgt----------taattttattttaaataatttttttaaaatga-t-aaaaaaattacatttacccccaaggta----gcattcttgtgttctatcttttttgtatatcgtaaatccaagtatctatttgataatattttcttttattataaataatttgtttctgcatttattgtagtgttaagtctgctgttgataaattaccccagc-tttatttttctaaaaag----tttgttttatccttatttttgaatgatggtgttgctgtttgctgaatttgcagttctaggttgacag-tt---------------------------------------tttatatttttaaagtaaaattctaatcccttgttttt------gcttcatttctgataaattt i rheMac8.chr5 I 324 C 0 s macNem1.NW_012013133v1 24296107 571 - 25927173 acaatatactttcaaataatattttaccaatttgcac-----ataagaccattaaacagtgtactttctgtctcctgcccattcttaatttatcacaa-tgtaccttcaaat----agtattacccattttgaaaataat-taagaa-----atttat---gagtatgtttccatttttctc--atctttttttgagaattactatgcattttatttctgcatatgttataaatttcacattagatttttgtcttgcttt-aactgt----------taattttattttaaa----ttttttaaaatga-t-aaaaaaattacatttacccccaaggta----gcattcttgtgttctatcttttttgtatatcgtaaatccaagtatctatttgataatattttcttttattataaa----ttgtttctgcatttattgtagtgttaagtctgctgttgataaattaccccagc-tttatttttctaaaa------tttgttttatccttatttttgaatgatggtgttgctgtttgctgaatttgcagttctaggttgacag-tt---------------------------------------tttatatttttaaagtaaaattctaatcccttgttttt------gcttcatttctgataaattt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3330569 578 + 4669795 ataatatactttcaaataatattttaccactttgcat-----ataagaccattaaacagtgtaccttctgtctcctgcccatt-----tttatcacaattgtaccttcaaat----aatactacccattttgataataat-taagaa-----acttat-aagagaatgtttccaattttctcttacctttttttgagaattaccatgcattttatttctgcatatgttataaatttcacattacacttttgtcttgcttt-aactgt----------taattttattttaaataattttttaaaaatga-taaaaaaaattacatttacccccaaggta----gcattcttgtgttctatcttttttgtatattgtaaatccaagtatctatttgatgttattttcttttattataaataatttatttctgcatttattgta-----aagtctgctgttgagaaattaccccagc-tttatttttctaaaaag----tttgttttatccttatttttgaatgatggtgttgctgtttgctgaatttacagttctaggttgacagttt---------------------------------------tttaaatttttaaagtaaaattctaatcctttgttttt------gcttcctttctgataaattt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134288855 579 + 135778131 acaatatactttaaaataatattttaccactttgcat-----gtaagaccattaaacagtgtactttctgtctccTGCCcatttttaacttatcacaa-tgtaccttcaaat----aatattacccattttgaaaataat-taagaa-----acttat-aagagtatgtttcc------tttttctctttttttgagaattaccatgcattttatttctgcatatgttataaatttcacattacatttttgtcttgcttt-aactgt----------taattttattttaaataatttttttaaaatga-t-aaaaaaattacatttacccccaaggta----gcattcttgtgttccatcttttttgtatattgtaaatccaagtatctatttgatattattttcttttattataaataacttatttctgcatttattatagtgttaagtctgctgttgacaaattaccccagc-tttatttttctaaaaag----tttgttttatccttatttttgaatgatggtgttgctgtttgctgaatttacagttctaggttgacag-gt---------------------------------------tttaaatttttaaagtaaaattctaatcccttgttttt------gcttccttcctgataaattt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2726980 577 - 2847728 ataatatactttcaaataatattttaccactttgcat-----ataagaccattaaacagtgtaccttctgtctcctgcccattt-----ttatcacaa-tgtaccttcaaat----aatattacccattttgataataat-taagaa-----acttat-aagagaatgtttccaattttctcttatctttttttgagaattaccatgcattttgtttctgcatatgttataaatttcacattacacttttgtcttgcttt-aactgt----------taattttattttaaataattttttaaaaatgatt-taaaaaattacatttacccccaaggta----gcattcttgtgttctatcttttttgtatattgtaaatccaagtatctatttgatattattttcttttattataaataatttatttctgcgtttattgta-----aagtctgctgttgagaaattaccccagc-tttatttttctaaaaag----tttgttttatccttatttttgaatgatggtgttgctgtttgctgaatttacagttctaggttgacagttt---------------------------------------tttaaatttttaaagtaaaattctaatcccttgttttt------gcttcctttctgataaattt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 856023 580 + 2368649 acaatatactttcaaataatattttaccactttgcat-----ataagaccattaaacagtgtactttctgtctcctgcccatttttaatttatcacag-tgtaccttcaaat----aatattacccattttgaaaataat-taagaa-----acttat-acgagtatgtttccatttttctcttatcttttcttgagaattaccatgcattttatttctgcatatgttataaatttcacattacattttcatcttgcttt-aactgt----------taattttattttaaataattttttt-aaatga-t-aaaaaaattacatttacccccaaggta----gcattcttgtgt----tcttttttgtatattgtaaatccaagtatctatttgatagtattttattttattataaataatttatttctgcatttattgtagtgttaagtctgctgttgacaaattatcccagc-tttatttttctaaaaag----tttattttatccttatttttgaatgatagtgttgctgtttgctgaatttacagttctaggttgacag-tt---------------------------------------ttaaaatttttaaagtaaaattctaatcctttgttttt------gcttcatttctgataaattt i colAng1.NW_012116221v1 C 0 I 315 s canFam3.chr16 16933292 583 - 59632846 -----------------aatattttaacttttt---t-----aaaagaactttcac-----tgatctctgtttttgtatttCTATGAATATGt----a-tatatttataaattttatatataatttattttaaaattaa--taaGTACATCCACTTAA-TGATGAAGGTTT----------------TTTTTTTTTAATGCAGAATGTTGTCGACTTTTACAACTGGTCTGAAT----------AATCTC----TGCTTTTAAATGTAGTGTTTACACCATttatttttaaatta-atttttaaaatga-gaaaggtattttctatttcttctaaagta----atatcttggtactt--ttttttcccctcaatgtaaatccaagtttctatttggtatcacttttctttaccccaaaaaact--ttttcacagttcttttagtgc-aagtctgttagtgacaaattattccagg-ttt-tgttcctaaaaaaagtttttacttcaccaccatttttgaaggatggtttttccgtttgctaaatatagagttgcaggcttactt-ttttatttatttatttatttatttatttatttatttatttatttatttatttattttaatgttct--ttcattattttttgtctggctttatttctattgag--- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=96074.000000 s hg38.chr4_KI270789v1_alt 83863 19 + 205944 cagtcattctcatttttgt s panTro5.chr4 192875503 19 + 194502333 cagtcattctcatttttgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192759326 19 + 195804263 cagtcattctcatttttgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3795748 19 + 4876863 cagtcattctcatttttgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112681474 19 + 115148730 cagtcattctcgttttttt i nomLeu3.chr7b C 0 I 4391 s rheMac8.chr5 188967184 19 + 190429646 cagtcattctcatttttgt i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24296678 19 - 25927173 cagtcattctcatttttgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331147 19 + 4669795 cagtcattctcatttttgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134289434 19 + 135778131 cagtcattctcatttttgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2727557 19 - 2847728 cagtcattctcatttttgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 856918 19 + 2368649 cagtcattctcatttttgt i colAng1.NW_012116221v1 I 315 C 0 s canFam3.chr16 16933875 14 - 59632846 -----aagttggtctttgt i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=2210713.000000 s hg38.chr4_KI270789v1_alt 83882 434 + 205944 tcccctgtgtgtagtatgtatttttt--ctccagttgttttaaagttttt-tcttcatcactagtttacagtagtttcatttttatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagct----------gattggtgagtgtatagctttcattaaaccagtaaaatgtttagcta-----ttttaagtattttcctacctccttcctccccatcctgctcttgctttctcttggactctacttgcatgtatgttagattgctggctgtttttctactgttcactgattttgtatcttatttttag-tcttttttt--ctcaccttgcttcagtttggatagtttctgttgcaatattttcaagtatgtccatctttcc------tttcacagttttgagtatgctcttaaat----gcagtgaatttttcaatttaaatattgtaTTCT s panTro5.chr4 192875522 439 + 194502333 tcccctgtgtgtagtatgtatttttt--ctccagttgttttaaagttttt-tcttcaccactagtttacagtagtttcatttttatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagct----------gattggtgagtgtatagctttcattaaaccagtaaaatgtttagctattttcttttaagtattttcctacctccttcctccccatcctactcttgctttctctcggactctacttgcatgtatgttagattgctggctgtttttctactgttcactgattttgtatcttatttttag-tcttttttt--ctcaccttgcttcagtttggatagtttctgttgcaatattttcaagtatgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtaTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192759345 439 + 195804263 tcccctgtgtgtagtatgtatttttt--ctccagttgttttaaagttttt-tcttcaccactagtttacagtagtttcatttttatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagct----------gattggtgagtgtatagctttcattaaaccagtaaaatgtttagctattttcttttaagtattttcctacctccttcctccccatcctactcttgctttctctcggactctacttgcatgtatgttagattgctggctgtttttctactgttcactgattttgtatcttatttttag-tcttttttt--ctcaccttgcttcagtttggatagtttctgttgcaatattttcaagtatgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtaTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3795767 434 + 4876863 tcccctgtgtgtaatatgtatttttt--ctccagttgttttaaagttttt-tcttcatcactagtttacagtagtttcatttttatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagct----------gattggtgagtgtatagctttcattaaaccagtaaaatgtttagcta-----ttttaagtattttcctacctccttcctccccatcctactcttgctttctctcggactctacttgcatgtatgttagattgctggctgtttttctactgttcactgattttgtatcttatttttag-tcttttttt--ctcaccttgcttcagtttggatagtttctgttgcaatattttcaagtatgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtaTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112685884 438 + 115148730 ttccctgtgtgtagtatgtatttttt---tccagttgttctaaagttttt-tcttcaccactaggttacagtagtttcattttgatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagct----------gattggtgagtgtatagctttcattaaaccagtaaaacgtttagctattttcttttaagtattttcctacctccttcctccccatcctactcttgctttctctcggactctgcttgcatgtatgttagattgctggctgtttttctactgttcactgattttgtattttatttttag-tcttttttt--ctcaccttgcttcagtttggatagtttctgttgcaatattttcaagtacatccatctttcc------tttcacagttttgagtatgctcttacat----ccagtgaatttttcaatttaaatattgtaTTCT i nomLeu3.chr7b I 4391 C 0 s rheMac8.chr5 188967203 448 + 190429646 tccactgtgtgtagtacgtttttttc--ctccagt---tttcaagctttt-tcttcacgactaggttacagtagtttcattttgatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagctgaatttgttggattggtgagtgtatagctttcattaaaccagtaaaatgtttagctattttcttttacgtatcttcctatctccttcctccccatcctactcttgctttctctcagactctacttgcatgtatgttagattgctggctgtttttccaccgttcactgagtttgtattttatttttag-tcttttttttcctcactttgcttcagtttggatagtttctgttgcaatattttcaagtacgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtattct i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24296697 448 - 25927173 tccactgtgtgtagtacgtttttttc--ctccagt---tttcaagctttt-tcttcacgactaggttacagtagtttcattttgatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagctgaatttgttggattggtgagtgtatagctttcattaaaccagtaaaatgtttagctattttcttttacgtatcttcctatctccttcctccccatcctactcttgctttctctcagactctacttgcatgtatgttagattgctggctgtttttccaccgttcactgagtttgtattttatttttag-tcttttttttcctcactttgcttcagtttggatagtttctgttgcaatattttcaagtacgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtattct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331166 450 + 4669795 tccactgtgtgtagtacgtttttttt--ctccagttgctttcaagctttt-tcttcatgactaggttacagtagtttcattttgatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagctgaacttgttggattggtgagtgtatagctttcattaaaccagtaaaatatttagctattttcttttacgtatcttcctacctccttcctccccatcctactcttgctttctctcaggctctacttgcatgtatgttagattgctggctgtttttccaccgttcactgagtttgtattttatttttag-tctttttttttctcactttgcttcagtttggatagtgtctgttgcaatattttcaagtacatcgatctttcc------tttcacaggtttgagtatgctcttaaat----ccagtgaatttttcaa-ttaaatattgcattct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134289453 451 + 135778131 tccactgtgagtagtatgtttttttc--ctccagttgttttcaagctttt-tcttcacgactaggttacagtagtttcatttggatatagcttgtggtgcttctctttgtggtttgtcctgattttagttagctgaatttgttggattggtgagtgtatagctttcattaaaccagtaaaatgtttagctattttcttttacgtatcttcctacctccttcctccccatcctactcttgctttctctcagactc-acttgcatgtgtgttagattgctggctgtttttccatcgttcactgagtttgtattttatttttagttttttttttttctcactttgcttcagtttggatagtgtctgttgcaatattttcaagtacgtcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaatttaaatattgtattCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2727576 450 - 2847728 tccactgtgtgtagtacgtttttttt--ctccagttgttttcaagctttt-tcttcatgactaggttacagtagtttcattttgatatagcttgtggtgcttctctttgtggtttgtcctgattttagtcagctgaatttgttggattggtgagtgtatagctttcattaaaccagtaaaatatttagctattttcttttacgtatcttcctacctccttcctccccatcctactcttgctttctctcaggctctacttgtatgtatgttagattgctggctgtttctccactgttcactgagtttgtattttatttttag-tctttttttttctcactttgcttcagtttggatagtgtctgttgcaatattttcaagtacatcgatctttcc------tttcacagttttgagtatgctcttaaat----ccagtgaatttttcaa-ttaaatattgcaTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 856937 450 + 2368649 tccactgtgtgtagtacgtgtttttc--ctccagttgttttcaagctttt-tcttcacgactaggttgcagtagtttcattttgatgcagcttgtggcgcttctctttgtggcttttcctgatttcagtcagctgaatttgttggattggtgagtgtacagctttcattaaaccagtaacatgtttagctattttcttttacgtatcttcctacctccttcctccccatcctactcttgctttctctcagactctacttgcatgtatgttagattgctggctgtttttccaccgttcactgagtttgtattttatttttag-tctttttttt-ctcactttgcttcagtttggatagtgtctgttgcaatattttcaagtacgtcgatctttcc------tttcacagttttgagtatgcacttaaat----ctagtgaatttttcaatttaaatattgtaTTCT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16933889 431 - 59632846 tcccctgtgtgtattttgtcttttttctctctaggtgctttaaagtttttctctttatcactggtttacaaaaatttcatcttctgatgacttatgatgtttttc-ttgtggtttgtcctgattgcagtttgctgagtttgttaaattagggagtttatgattttcattaaaccagtgaaatatttagtcattattcagtaaatattt-------ttcttttctcccagcccact-----tccctttgggatcccactgacatgtatgttaca-tgatttctgttttcccactatttactg---------tttatttttag-tctcc------cccaatatgactcattttgaataatttttgttgtgatatcttc----atgttattttttccatatttttccatagtttttaatctgcttttaaacttagttagtgaacttctcaacttaaatattatattct i canFam3.chr16 C 0 I 657 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=1315518.000000 s hg38.chr4_KI270789v1_alt 84316 289 + 205944 GggccaggtgcggtggctaatgcctgtaatcccagcactttgggaggctgaggagggcggatcacctgaggtcgggagttagagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcactagaacccaggaggcagaggttgcagtgagccacaattgagccattgcactccagcctgggcaacaagagcgaaattctgtcCCCCGCCGAA---GAAAA s panTro5.chr4 192875961 289 + 194502333 GggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggagggaggatcacctgagatcgggagttagagaccagcctgaccaacatggagaaaccctgtctctactgaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcgggaggctgaagcaggagaatcactcgaacccaggaggcagaggttgcagtgagccacaatcgagccattgcactccagcctgggcaataagagcaaaattccgtcCGCTGCCGAA---AAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192759784 289 + 195804263 GggccaggtgcggtggctcatgcctgtaatcccagcactttgggagggcgaggagggcggatcacctgagatcgggagttagagaccagcctgaccaacatggagaaaccctgtctctactgaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcgggaggctgaagcaggagaatcactcgaacccaggaggcagaggttgcagtgagccacaatcgagccattgcactccagcctgggcaataagagcaaaattccgtcCGCTGCCGAA---AAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796201 288 + 4876863 Gggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggagggcggatcacctgaggtcgggagttagagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaatcactcgaacccaggaggcagaggttgcagtgagccacaattgagccattgcactccagcctgggcaacaagagcgaaattctgtcc-ccgccgaa---aaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686322 289 + 115148730 Gggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggccaaggagggcggatcacctgaggttgggagttagggaccagcctgaccaacatggagaaatcctgtttctactaaaaatacaaaatgagtggtggcatatgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaactcaggaggcagaggttgcagtgagccaagatcaagccattgcactccagcctgggcaacaagagtgaaattccgtcccctgccaaa---aaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188967651 288 + 190429646 gggctgggtgcggtgactcatgcctgtaatcccagggctttgggaggccaaggagggcagatcacctgaggtcaggagttagagaccagcctgaccaacatggagaaaccccgtctctaccaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactctggaggctgaggcaggagaatcgctcgaacccaggaggcagaggttgcagtgaggcaagctcaagccattgcactccagcctgggcaacaagagtgaaattccgtccccgtgcaaa----aaaa i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297145 288 - 25927173 gggctgggtgcggtgactcatgcctgtaatcccagggctttgggaggccaaggagggcagatcacctgaggtcaagagttagagaccagcctgaccaacatggagaaaccccgtctctaccaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactatggaggctgaggcaggagaatcgctcgaacccaggaggcagaggttgcagtgagccaagctcaagccattgcactccagcctgggcaacaagagtgaaattccgtccccgtgcaaa----aaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331616 288 + 4669795 gggctgggtgcggtgactcacgcctgtaatcccagcgctttgggaggccaaggagggcggatcacctgaggtcaggagttagagaccagcctgaccaacatggagaaaccccgtctctaccaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcagaaggctgagacaggagaatcgctcgaacccaggaggcggaggtcgcagtgagccaagctcaagccattgcgctccagcctgggcaacaagagggaaattctgtccctctgcaaa----aaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134289904 288 + 135778131 Gggctgggtgcggtgactcacacctgcaatctcagtgctttgggaggccaacgagggcggatcacctgaggtcaggagttagagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaatgagtggtggcacatgcctgtaatcccagcttctcgggaggctgaggcaggagaatcgctcaaacccaggaggcggaggtggcagtgagccaagctcaagccattgcgctccagcctgggcaacaagagtgaaattccatccccctgcaaa----aaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728026 289 - 2847728 GggctgggtgcggtgactcatgcctgtaatcccagcgctttgggaggccaaggagggcggatcacctgaggtcaggagttagagaccagcctgaccaacatggagaaaccccgtctctaccaaaaatacaaaatgagtggtggcacatgcctgtaatcccagctactcagaaggctgagacaggagaatcgctcgaacgcaggaggcggaggtcgcagtgagccaagctcaagccattgcgctccagcctgggcaacaagagtgaaattccgtcCCCCTGCAAA---GAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857387 292 + 2368649 Gggccgggtgcagtgactcatgcctgtaatcccagtactttaggaggccgaggagggtggatcacctgaggtcaggagttagagaccagcctgaccaacatggagaaaccccgtctctactaaaactacaaaatgagtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgctcagacccaggaggcggaggttgccatgagccaagctcaagccattgcactccagcctgggcaacaagagtgaaattccgtccccctgcaaaaaaaaaaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e aotNan1.NW_018492112v1 3367935 2058 - 5030052 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=69685.000000 s hg38.chr4_KI270789v1_alt 84605 17 + 205944 ATTGTATTCTTTAG-TCC s panTro5.chr4 192876250 17 + 194502333 ATTGTATTCTTTAG-TCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760073 17 + 195804263 ATTGTATTCTTTAG-TCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796489 17 + 4876863 aTTGTATTCTTTAG-TCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686611 17 + 115148730 aTTGTATTTTTTAG-TCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188967939 18 + 190429646 attgtattctttagttcc i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297433 18 - 25927173 attgtattctttagttcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331904 9 + 4669795 a---------TTAGTTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290192 18 + 135778131 aTTGTATTCTTTAGTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728315 18 - 2847728 GTTGTATTCTTTAGTTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857679 17 + 2368649 aTTGTATTATTTAG-TCC i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3369993 17 - 5030052 attgtattctttaG-TCC i aotNan1.NW_018492112v1 I 2058 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I e otoGar3.GL873580 11216843 366 - 11315646 I a score=49518.000000 s hg38.chr4_KI270789v1_alt 84622 7 + 205944 CAACTAT s panTro5.chr4 192876267 7 + 194502333 CAACTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760090 7 + 195804263 CAACTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796506 7 + 4876863 CAACTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686628 7 + 115148730 CAACTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188967957 7 + 190429646 caACTAT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297451 7 - 25927173 caACTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331913 7 + 4669795 CAACTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290210 7 + 135778131 CAACTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728333 7 - 2847728 CAACTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857696 7 + 2368649 CAACTAT i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3370010 7 - 5030052 CAACTAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11217209 7 - 11315646 CAATTAT i otoGar3.GL873580 I 366 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86564366 231 - 129401213 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=296857.000000 s hg38.chr4_KI270789v1_alt 84629 58 + 205944 TGATACATGG-ATAAGGTGTACCATCGCCACCACCATTATCAACATCATAACAACAGTG----------- s panTro5.chr4 192876274 58 + 194502333 TGATACATGG-ATAAGGTGTACCATCTCCACCACCATTATCAACATCATAACAACAGTG----------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760097 58 + 195804263 TGATACATGG-ATAAGGTGTACCATCGCCACCACCATTATCAACATCATAACAACAGTG----------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796513 58 + 4876863 TAATACATGG-ATAAGGTGTACCATCGCCACCACCATTATCAACATCATAACAACAGCG----------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686635 57 + 115148730 TGATACGTGGAAAAAAGTGTACCACTGCTACCACCATTATCAACATCGTAACA--AGTG----------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188967964 58 + 190429646 TGATACACAG-ATAAAGTGTACCACCGCCACCACCATTATCAACATCGTCACAACAGTG----------- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297458 58 - 25927173 TGATACACAG-ATAAAGTGTACCACCGCCACCACCATTATCAACATCGTCACAACAGTG----------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331920 58 + 4669795 TGATACACAG-ATAAAGTGTACTACTGCCACCACCATTATCCACATCATCACAACAGTG----------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290217 58 + 135778131 TGATACACAG-ATAAAGTGTACCACTGCCACCACCATTATCAACATCATCACAACAGTG----------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728340 58 - 2847728 TGATACACAG-ATAAAGTGTACTACTGCCACCACCATTATCCACATCATCACAACAGTG----------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857703 58 + 2368649 TGATACACGG-ATAAAGTGTACCACCGCCACCACCATTATCGACATCATCACAACAGTG----------- i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3370017 54 - 5030052 TGATACTTGG-ATAAAGTGTGCC----CCCCCACCATTATCACCATCGTCACAGCAGTG----------- i aotNan1.NW_018492112v1 C 0 I 7 s otoGar3.GL873580 11217216 52 - 11315646 TGACATATGT-TCAGA--GTACCAT----ACCAACATCATCACCACCATAAATAGAGTT----------- i otoGar3.GL873580 C 0 I 5 s mm10.chr8 86564597 69 - 129401213 TGATACACAA-TTGTGAGGATCATTTGCCATCACCAATAACATTACCATAATTACAGAGATAGAGCTTTG i mm10.chr8 I 231 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 974066 2122 - 2196201 I e proCoq1.NW_012145301v1 3911356 2448 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=443515.000000 s hg38.chr4_KI270789v1_alt 84687 53 + 205944 ttttatagcacttttaagactataaatgcttttatatatattaacagatttta s panTro5.chr4 192876332 53 + 194502333 ttttatagcacttttaagactataaatgcttttatatatattaacagatttta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760155 53 + 195804263 ttttatagcacttttaagactataaatgcttttatatatattaacagatttta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796571 53 + 4876863 ttttacagcacttttaagactataaatgcttttatatatattaacagatttta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686692 53 + 115148730 ttttatagcacttttaagactataaatgcttttatagatattaacagatttta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188968022 53 + 190429646 TTTCATAGCACTTTTAAGACTATAATTGCTTTTATATATATTAACAGATTTTA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297516 53 - 25927173 TTTCATAGCACTTTTAAGACTATAATTGCTTTTATATATATTAACAGATTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3331978 53 + 4669795 ttttacagcacttttaagactataattgcttttatatatattaacagatttta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290275 53 + 135778131 ttttatagcacttttaagactataattgcttttatatatattaacagatttta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728398 53 - 2847728 ttttacagcacttttaagactataattgcttttatatatattaacagatttta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857761 53 + 2368649 TTTTATAGCACTTTGAAGACTATAATTGCTTTTATATATATTAACAGATTTTA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 976188 53 - 2196201 ttttatagcacttttaagactacaaatgcttttacatttattcacagatttta i cebCap1.NW_016107886v1 I 2122 C 0 s aotNan1.NW_018492112v1 3370078 53 - 5030052 ttttatagcacttttaagactacaaatgcttttatatttattcatagatttta i aotNan1.NW_018492112v1 I 7 C 0 s proCoq1.NW_012145301v1 3913804 53 + 3993831 ttttatagcattttaaacactataaatccctttacctatattaacagagttta i proCoq1.NW_012145301v1 I 2448 C 0 s otoGar3.GL873580 11217273 52 - 11315646 TTTTACAGCACTTTAAACACGATAAATCCCTTTACCTGTGTTAACCG-TTTTA i otoGar3.GL873580 I 5 C 0 s mm10.chr8 86564666 49 - 129401213 TCTTGAAGCCCTTTAAGAACTACACATTCTTTCACACAGATT----GATTTTC i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e saiBol1.JH378165 13077299 3077 - 14256875 I e macFas5.chr5 187908995 2862 + 189454096 I a score=488350.000000 s hg38.chr4_KI270789v1_alt 84740 57 + 205944 cactcactgaggcttgg-ttatttccatcttaaagatatgaagtgtgaggctcagaaa s panTro5.chr4 192876385 57 + 194502333 cactcactgaggcttgg-ttatttccatcttaaagatatgaagtgtgaggctcagaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760208 57 + 195804263 cactcactgaggcttgg-ttatttccatcttaaagatatgaagtgtgaggctcagaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796624 57 + 4876863 cactcactgaggcttgg-ttatttccatcttaaagttatgaagtgtgaggctcagaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112686745 58 + 115148730 cgctcaccggggcttggtttatttccatcttaaagatatgaagtgtgaggctcagaaa i nomLeu3.chr7b C 0 I 319 s rheMac8.chr5 188968075 54 + 190429646 CGCTCACTGACGCTTGG-TTATTTCTGTCTTAAAGATATGAGGTGTGAGGCTCAG--- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297569 54 - 25927173 CACTCACTGACGCTTGG-TTATTTCTGTCTTAAAGATATGAGGTGTGAGGCTCAG--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332031 57 + 4669795 cgctcactggtgcttgg-ttatttctgtcttacagatatgaggtgtgaggctcagaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290328 56 + 135778131 cgctcactgacgcttgg-ttatttctgtcttaaagatacgaagtgtgaggctcag-aa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728451 57 - 2847728 cgctcactgatgtttgg-ttatttctgtcttacagatatgaggtgtgaggctcagaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857814 57 + 2368649 CGCTCACTGATGCTTGC-TTATTTCTGTCTTAAAGATATGAAATGTGAGGCTCAGAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080376 57 - 14256875 CACTCACTGAAGCTTGG-TTATTTCAGTCTTAAAGATATGAAGTGTGAGGCTCAGAAA i saiBol1.JH378165 I 3077 C 0 s cebCap1.NW_016107886v1 976241 57 - 2196201 cactcactgaagcttgg-ttatttcagtcttaaagatatgaagtgtgaggctcagaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370131 57 - 5030052 cactcactgaagcttgg-ttatttcagtcttaaagttatgaagtgtgaggctcagaaa i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3913857 57 + 3993831 ccctcatggaggcttag-ttatttcagtcttaaagatgtgaagtttgaggcttagaat i proCoq1.NW_012145301v1 C 0 I 32 s otoGar3.GL873580 11217325 56 - 11315646 CTCTCAGTGAGCTTttg-ttatttcagtcttgacgatatgaagtctga-actcagaaa i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86564715 39 - 129401213 TCCTCCCTGAAGCCCAT-CT------------------TGAATTCTGATGTTCAGAAA i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e macFas5.chr5 187908995 2862 + 189454096 I a score=215516.000000 s hg38.chr4_KI270789v1_alt 84797 34 + 205944 ataagtcagttttacaaacatactgggaaaaaaa s panTro5.chr4 192876442 34 + 194502333 ataagtcagtttttcaaacatactaggaaaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760265 34 + 195804263 ataagtcagtttttcaaacatactaggaaaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796681 34 + 4876863 ataagtcagtttttcaaacatactaggaaaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968129 32 + 190429646 --AAGTCAGTTTTTCAAACATACTAGGAAAATAA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297623 32 - 25927173 --AAGTCAGTTTTTCAAACATACTAGGAAAATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332088 34 + 4669795 ataaatcagttattcaaacatactaggaaaataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290384 34 + 135778131 acaagtcagttattcaaacatactaggaaaataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728508 34 - 2847728 ataaatcagttattcaaacatactaggaaaataa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857871 34 + 2368649 ATAAGTCAGTTATTCAAACATACTAGGAAAATAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080433 33 - 14256875 ATAAGTCAGTTATTCAGACATACTAGAAAAA-AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976298 33 - 2196201 ataagtaagtttttcaaacatactagaaaaa-aa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370188 33 - 5030052 ataagtcagttattcaaacatactagaaaaa-aa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11217381 33 - 11315646 -taagttacttattcagacacagcagggaaaaat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86564754 31 - 129401213 -TAAGTGGTTCGTTCA-ACACACCAGAGAAAAG- i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3913914 32 + 3993831 I e micMur3.chr14 17485873 4870 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e macFas5.chr5 187908995 2862 + 189454096 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=989283.000000 s hg38.chr4_KI270789v1_alt 84831 118 + 205944 ttgtatgctagaactgaaatctaaatcta-tccaagtcaa---tttttatttgctacttcatgctgccCATATCTATAGTTGATCTTTTAC--------------------------------------CATACCATGATCTTAGGAGACTAGGAAACAA s panTro5.chr4 192876476 118 + 194502333 ttgtatgctagaactgaaatctaaatcta-tccaagtcaa---tttttatttgctacttcatgctgccCATATCTATACTTGATCTTTTAC--------------------------------------CATACCATGATCTTAGGAGACTAGGAAACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760299 118 + 195804263 ttgtatgctagaactgaaatctaaatcta-tccaagtcaa---tttttatttgctacttcatgctgccCATATCTATACTTGATCTTTTAC--------------------------------------CATACCATGATCTTAGGAGACTAGGAAACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796715 118 + 4876863 ttgtatgctagaactgaaatctaaatcta-tccaagtcaa---tttttatttgctacttcatgctgccCATATCTATAGTTGATCTTTTAC--------------------------------------CATACCATGATCTTAGGAGACTAGGAAACAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968161 118 + 190429646 TTGTATGCTAGGACTGAAATCTAAATCTA-TCCAAGTCAA---TTTTTATTTGCTACTTCATGCTGCCCATATCTATAGTTGATGGTTTAC--------------------------------------CACACCATGATCTTAGGAGACTATGAAACAA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297655 118 - 25927173 TTGTATGCTAGGACTGAAATCTAAATCTA-TCCAAGTCAA---TTTTTATTTGCTACTTCATGCTGCCCATATCTATAGTTGATCGTTTAC--------------------------------------CACACCATGATCTTAGGAGACTATGAAACAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332122 118 + 4669795 ttgtatgctaggactgaaatctcaatcta-tccaagtcaa---gttttatttgctgcttcatgctgccccTATCTATAGTTGATCTTTTAC--------------------------------------CACACCATGATCTTAGGCGACTAGGAAACAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290418 118 + 135778131 ttgcatgctaggactgaaatctaaatcta-tccaagtcaa---tttttatttgctgcttcatgctgccccTATCTATAGTTGATCTTTGAC--------------------------------------CACACCATGATCTTAGGAGACTAGGAAACAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728542 118 - 2847728 ttgtatgctaggactgaaatctcaatcta-tccaagtcaa---tttttatttgctgcttcatgctgcccctATCTATAGTTGATCTTTTAC--------------------------------------CACACCATGATCTTAGGAGACTAGGAAACAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 857905 116 + 2368649 TTGTATGCTAGGACTGAAATCTAAATCTA-TCCAAGTCAA---TTTTTATTTGTTACTTCATGCTGCCC--ATCTATAGTTGATCTTTTAC--------------------------------------CACACCATGATCTTAGGAGACTAGGAAACAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080466 118 - 14256875 TCATATAGTAGGACTGAAATCTAAAGCTA-TCCAAGCCAG---TTTTTATTTGCTACTTCCTGCTGCCCACATCTGTAGCTGATCTTTCAC--------------------------------------CACACCGTGATCTTAGGAGACTAGGAAACAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976331 118 - 2196201 tcatatagtgggaccgaaatctaaagctg-tccaagtcag---tttttatttgctacttcatgctgccCACATCTGTAGTTGATCTTTCAC--------------------------------------CACACCATGATCTTAGGAGACTAGGAAACGA i cebCap1.NW_016107886v1 C 0 I 8 s aotNan1.NW_018492112v1 3370221 118 - 5030052 ttatatagtaggactgaaacctaaagcta-tccaagtcag---tttttgtttgctacttcatgctgccCACATCTGTAGCTGATCTTTGAC--------------------------------------CACACCATGATCTTAGGAGACTAGGAAACGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17490743 120 - 93316391 ttgtatactaagactgaaatctgaatctattccaagtcca---tttttcttcactactttatgctaccCACATCTATAGTTGATCTTTTAT------------------------------------CACATACCATGATATTAAGAGACCGAGAAAAA- i micMur3.chr14 I 4870 C 0 s proCoq1.NW_012145301v1 3913946 119 + 3993831 ttgtatactaagactgaagtctaaatcaatttgaagtcca---ttttt-ttcactactttatgctaccCATATCTATAGTTGATCCTTTAT------------------------------------CACATACCATGATATTAAGAGACCAAGAAAAA- i proCoq1.NW_012145301v1 I 32 C 0 s otoGar3.GL873580 11217414 151 - 11315646 --tagtactaagagtgaagtct-aatctattccaagt-ga---tttttctccactactttatgctactcacatctctgGTTAATCCTTGATACTTTATGCTACTCACACCTCTGGTTAATCCTTGACTGCATGCCAAGATATTAATAAACC-AGGAAAA- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86564785 112 - 129401213 TAGCATAATAAGACTGAATTCTAAATCAATTTCAACTTGACTTTTTTTCTTTGCAATTTTATGTTGCTC-------TAGTTGATCTTCTGT--------------------------------------GAAAC--TGATCTT-GGAGACCAGGATAAAA i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e macFas5.chr5 187908995 2862 + 189454096 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=80421.000000 s hg38.chr4_KI270789v1_alt 84949 16 + 205944 TAAAACCACAAGTAAG s panTro5.chr4 192876594 16 + 194502333 TAAAACCACAAGTAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760417 16 + 195804263 TAAAACCACAAGTAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796833 16 + 4876863 TAAAACCACAAGTAAG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968279 16 + 190429646 TCAAACCACAAGTAAG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297773 16 - 25927173 TCAAACCACAAGTAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332240 16 + 4669795 TAAAACCACAAGTAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290536 16 + 135778131 TCAAACCACAAGTAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728660 16 - 2847728 TAAAACCACAAGTAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858021 16 + 2368649 TAAAACCACAAGTAAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080584 8 - 14256875 ----GGCACAGG---- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3370339 8 - 5030052 ----GGCACAAG---- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17490863 16 - 93316391 TAAAATTGCAAATAAG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3914065 16 + 3993831 TAAAACTGCAAATAAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11217565 16 - 11315646 TAAAATCACAAACAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86564897 10 - 129401213 ---CAAGGCAAAT--- i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 976449 8 - 2196201 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e macFas5.chr5 187908995 2862 + 189454096 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=2233638.000000 s hg38.chr4_KI270789v1_alt 84965 289 + 205944 AAAATGATTCTTTCTATACGTTTCAAACCAAATAGCTATCTAAGACAATTTATCCAGATAATCCAAGTCAAATAAAAGTATGCTTCAGTTCTCTGAATATTATAAGCAAAAGTGTAAAAGATAGCTTTGTGCCTCCAGTGAAGAGCAGTCAGGCAACCAGAAGGCATACCTAGCAATATAATATTTATTATTTCTTGAGCTTT-TATTGT-TCGGTGTTcaatagtcctgtgagatagttctcattattc-tttatttatacatgagaaaactgtctcacagaagttgcata s panTro5.chr4 192876610 289 + 194502333 AAAATGATTCTTTCTATACATTTCAAACCAAATAGCTATCtaagacaatttatccagataatccaagtcaaataaaagtatgcttcagttctctggatattataagcaaaagtgTAAAAGATAGCTTTGTGCCTCCAGTGAAGAGCAGTCAGGCAACCAGAAGGCATACCTAGCGATATAATATTTATTATTTCTTGAGCTTT-TATTGC-TCGGTGTTcaatagtcctgtgagatacttctcattattc-tgtatttatacatgagaaaattgtctcacagaagttgcata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760433 289 + 195804263 AAAATGATTCTTTCTATACATTTCAAACCAAATAGCTATCtaagacaatttatccagataatccaagtcaaataaaagtatgcttcagttctctggatattataagcaaaagtgTAAAAGATAGCTTTGTGCCTCCAGTGAAGAGCAGTCAGGCAACCAGAAGGCATACCTACCGATATAATATTTATTATTTCTTGAGCTTT-TATTGC-TCGGTGTTcaatagtcctgtgagatacttctcattattc-tgtatttatacatgagaaaattgtctcacagaagttgcata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3796849 289 + 4876863 AAAATGATTCTTTCTATACATTTCAAACCAAATAGCTATCtaagacaatttatccagataatccaagtcaaataaaagtatgcttcagttctctggatattataagcaaaagtgTCAAAGATAGCTTTGTGCCTCCAGTGAAGAGCAGTCAGGCAACCAGAAGGCATACCTAGCGATATAATATTTATTATTTCTTGAGCTTT-TATTGC-TGGGTGTTcaatagtcctgtgagatagttctcattattc-tttatttatacatgagaaaattgtctcacagaagttgcata i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968295 288 + 190429646 AAAATGAGTC-TTCTGTACATTTCAAACCAAACAGCTATCTAAGACAATTTATCCAAATAATCCATGTCAAATGAAAGCATGCTTCCGTTCTCTAGATATTATAAGCAAAACTGTAAAAGATAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACCATGCGGCATACCTAGCGATGCAGTATTTATTATTTCTTGAGCTTT-TATTGC-TTGGTGTTcaatagtcctgtgagatagttctcattacgc-tttattgatacctgagaaaactgtctcacagaagtcgcata i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24297789 288 - 25927173 AAAATGAGTC-TTCTGTACATTTCAAACCAAACAGCTATCTAAGACAATTTATCCAAATAATCCATGTCAAATGAAAGCATGCTTCCGTTCTCTAGATATTATAAGCAAAACTGTAAAAGATAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACCATGCGGCATACCTAGCGATGCAGTATTTATTATTTCTTGAGCTTT-TATTGT-TTGGTGTTcaatagtcctgtgagatagttctcattacgc-tttattgatacctgagaaaactgtctcacagaagtcgcata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332256 288 + 4669795 AAAATGAGTC-TTCTATACATTTCAAACCAAATAGCTGTCTAAGACAATTTATCCAAATAATCCATGTCAAATGAAAGCATGCTTCCGTTCTCTAGCTATTATAAGCAAAACTGTAAAAGATAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACCATGCGGCATACCTAGCGATGCAGTATTTATTATTTCTTGAGCTTT-TATTGC-TTGGTGTTcaatagtcctgtgagatagttctcattacgc-tttattgatacctgagaaaactgtctcacagaagttgcata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290552 288 + 135778131 AAAATGATTC-TTCTATACATTTCAAACCAAATAGCTATCTAAGACAATTTATCCAAATAATGCATGTCAAATGAAAGCATGCTTCCATTCTCTAGATACTATAAGCAAAACTGTGAAAGATAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACCATGCGGCATACCTAGCGATGCAGTATTTATTATTTCTTGAGCTTT-TATTGC-TTGGTGTTcaatagtcctgtgagatggttctcatgacgc-tttatttatacatgagaaaactgtctcacagaggttgcata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728676 288 - 2847728 AAAATGAGTC-TTCTATACGTTTCAAACCAAATAGCTATCTAAGACAATTTATCCAAATAATCCATGTCAAATGAAAGCATGCTTCCGTTCTCTAGATATTATAAGCAAAACTGTAAAAGATAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACCATGCGGCATACCTAGCGATGCAGTATTTATTATTTCTTGAGCTTT-TATTGC-TTGGTGTTcaatagtcctgtgagatagttctcattacgc-tttattgatacctgagaaaactgtctcacggaagttgcata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858037 288 + 2368649 AAAATGATTC-TTCTATACATTTCAAACCAAATAGCTATCTAAGATAATTTATCCAAATAATCCATGTCAAATAAAAGCATGCTTCCTTTCTCTAGATATTATAAGCAAAACTGTAAAAGACAGCTTTGTGTCCCCAGTGAAGAGCAGTCAGGCAACCATGAGACATACCTAGTGATGCAGTATTTATTATTTCTTGAGCTTC-TATTGC-TTGGTGTTcaatagtcctgtgagatagttctcattacgc-ttcatttatacatgagaaaactgtctcacagaagttgtgta i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080592 233 - 14256875 AAAACGATTCTTCT---------------------ATATCAAAGCCAGTTTATCCAAAGAATCCAAGTCAAATATAAACGTGCTTCAGTTCTCCAGGTATTATAAGCAAACATGCAAAAGGGAGCATTGTGCCCCCAGTGAAGAGCAGTCAGGCAACAGTAAGGCATAGCT-GTGACATGGTATTTATCATTTCTTGAGCTTC-TGTC------------------------------------TTATACATTTATTTATCCGtgagctaactgtctcacagaagttgcata i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976457 255 - 2196201 AAAACGATTCTTCCTATACATTTAAAACCAAATTGCTATCAAAGCCGGTTTATCCAAATAATCCAAGTCAAATAAAAGTGTGCTTCAGTTCTCCAGGTATTATAAGCAAATATGCAAAAGGGACCTTTGATTCCCCAATGAAGAGCAGTCAGGCAACCATAAGGCATAGCTGGTGACATGATATTTATCATTTCTTGAGCTTC-TGTT------------------------------------ttatacctttatttatccatgagctaactgtctcgcagaagttgcata i cebCap1.NW_016107886v1 I 8 C 0 s aotNan1.NW_018492112v1 3370347 255 - 5030052 AAGACGATTCTTCCTATACATTTAAAGCCAAATAGCTATGAAAGCCAGTGTATCCAAACAATCCAAGTCAAATCAAAGCGTGCTTCCATTCTCCAGGTGTTATAAGCAAATATGCAAAAGGGAGCTTTGTGCCCCCAGTGAAGAGCAGTCAGGCAACAATGAGGCATAGCTGCTGACATGATATTTATCATTTCTTGAGCTTc-tatt------------------------------------ttatacacttatttatccatgagctaactgtctcacagaagttgcata i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17490879 278 - 93316391 AAAACTATTCTTTCTATACATATAAACCCAAATAGATACCTCAGACAATTTATCCAAATGATCTAAGTCAAATAAAAACATGCTTCAATTCTCTTGATACTATAAGAAAATAAGTAAAAGTCATTTTTGTGTCTTTAATAAAGAGTGATCAGG-----------CATGGCTGGTGATATAATATTTGTCATTTCTAGAGCTTT-TATTGC-TTGGTGCTcaatagtcctgtgagacagctatcattatgc-ttcctttatacatgaggaaatattctcacagatgttaaaca i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3914081 278 + 3993831 AAAACTATTCTTTCTATATATATAAACCCAAATAGATACCTGAGACAATTTATCCAAATGATCCAAGTCAAATAAAAACATGCTTCAATTCTCTTGATCCTATAAGAAAATAAGTAAAAGACATTTTTGCGTCTTTAATAAAGAGTGATCGAG-----------CATGGCTAGTGATATAATATTTGTCATTTCTCAAGCTTT-TATTGC-CTGGTGCTcaatagtcctgtgagatagttatcattatgc-tttctttatacttgagaaaatcgtctcacagaagttaaaga i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11217581 277 - 11315646 AAAGCTATTCTTTCTATACATATTAACCCAAATAGATACCTAAGATGACT--TCCAAATGATCCAAGTCAAACAAAATCATGCTTCAGTTCTCTCACTATCATAAGAAAATTAGTAAAAGACATCTTGGTGCCTTAAATGAAGCATGATCAGG-----------CATAACTAGTGATGTAATATTTGCCATTTCTTAACCTTT-TATGGCTTTGGTGCTTaatagtcctgtgagatagcgatcatgatgc-tctcttcagacatgagaatatcatcttacagaatttaagaa i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86564907 283 - 129401213 CAAACAATTCTTCTTACAGCCCTAAAATCAAATTGATGT-TAAGACATTTTGTCTAAATGATCCAAGTCAAATAAAAACACATTTCCTCTCT-TAGACATTGTAAG-AAACAGATAACAGATAGCTTTGTGCCTCTAATGAGGAGT-GTTACGCATCCACAGGGCATAGCTAGTGATATAATATTTATCATTTCTTGTACTTTCTATTGC-TTAGTGCTCAGTAGTCCAGTGAGAAAGCTGTCATGATGC-CTTATTTATAGAGAAGAATACAG-CTCAAAAAAGAATCA-- i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e macFas5.chr5 187908995 2862 + 189454096 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=620900.000000 s hg38.chr4_KI270789v1_alt 85254 62 + 205944 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtccaggtcagtctt s panTro5.chr4 192876899 62 + 194502333 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtccaggtcagtctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760722 62 + 195804263 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtccaggtcagtctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797138 62 + 4876863 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtccaggtcagtctt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968583 62 + 190429646 actcgctcagagtcccatggataacaagtggcccaggcagcacttgagtcgaggtcagtctt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187911857 62 + 189454096 ACTCGCTCAGAGTCCCATGGATAACAAGTGGCCCAGGCAGCACTTGAGTCGAGGTCAGTCTT i macFas5.chr5 I 2862 C 0 s macNem1.NW_012013133v1 24298077 62 - 25927173 actcgctcagagtcccatggataacaagtggcccaggcagcacttgagtcgaggtcagtctt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332544 62 + 4669795 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtcgaggtcagtctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290840 62 + 135778131 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtcggggtcagtctt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2728964 62 - 2847728 acttgctcagagtcccatggataataagtggcccaggcagcacttgagtcgaggtcagtctt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858325 62 + 2368649 acttgctcagagtcccatggataataagtgacccaggcagcacttgagtcgaggtcagtctt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080825 62 - 14256875 acttgctgagagtcccgtggatggtaagtggcccaggcagaacctgagtgcaggtcaggttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976712 62 - 2196201 acttgctgcgagtcccgtggatcgtaagtggcccaggcagaacttgagtgcagatcaggttc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370602 62 - 5030052 acttgctgagagtcccgtggacagtaggtggcccaggcagaacttgagtccgggtcagcttt i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17491157 62 - 93316391 gcctgctgagagactcatagatacaaagtggcccaggcagcatttgggtccagatcactctt i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3914359 62 + 3993831 acttgataagaggctcatagataacaagcggcccagggaggatttgggtccagatcagtctt i proCoq1.NW_012145301v1 C 0 I 306 s otoGar3.GL873580 11217858 52 - 11315646 actcactgaaaccctcatagataacaagtggctca----------gggtccagaacAGTCTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86565190 62 - 129401213 GCTTACTGAGAACCATTTACAGAATAAGTGTCTTGGACAGAATAGGAACTGACATTAGTTTA i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=240954.000000 s hg38.chr4_KI270789v1_alt 85316 27 + 205944 gctttttccctttcttattcactgtcc s panTro5.chr4 192876961 27 + 194502333 gctttttccctttcttattcactgtcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760784 27 + 195804263 gctttttccctttcttattcactgtcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797200 27 + 4876863 gctttttccctttcttattcactgtcc i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968645 27 + 190429646 gctttttgcttttcttattcactgtcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187911919 27 + 189454096 GCTTTTTGCTTTTCTTATTCACTGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298139 27 - 25927173 gctttttgcttttcttattcactgtcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332606 27 + 4669795 gctttttgcttttcttattcactgtcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290902 27 + 135778131 gctttttgcttttcttattcactgtcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729026 27 - 2847728 gctttttgcttttcttattcactgtcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858387 27 + 2368649 gctttttgcttttcttactcactgtcc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080887 27 - 14256875 actttttccctttcttattcactgtcc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976774 27 - 2196201 gctttttccctttcttattcactgtcc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370664 27 - 5030052 gctttttccctttcttgttcactgtcc i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17491219 27 - 93316391 acttttgacatttcttatccactatcc i micMur3.chr14 C 0 I 329 s otoGar3.GL873580 11217910 27 - 11315646 ACTTTTCACATTTCTTGTAGAATATCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86565252 13 - 129401213 ATTTCTTCCCTCC-------------- i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=665265.000000 s hg38.chr4_KI270789v1_alt 85343 87 + 205944 taccttgcctctatgTTTGTGTCCCTTCTTAGTCACTTCTCTTGCACTGTTGATTTGCC--TTTTTTTAATACATATGTGC-----TTTATTTA s panTro5.chr4 192876988 87 + 194502333 taccttgcctctatgTTTGTGTCCCTTCTTAGTCACTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATACACATGTGC-----TTTATTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760811 87 + 195804263 taccttgcctctatgTTTGTGTCCCTTCTTAGTCACTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATACACATGTGC-----TTTATTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797227 89 + 4876863 taccttgcctctatgTTTGTGTCCCTTCTTAGTCACTTCTGTTGCACTGTTGATTTGTCTTTTTTTTTAATACACATGTGC-----TTTATTTA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968672 87 + 190429646 taCCGTGCCTCTATGTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTGC-----TTTATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187911946 87 + 189454096 TACCGTGCCTCTATGTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTgc-----tttattta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298166 87 - 25927173 taccgtgcctctatgTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTGC-----TTTATTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332633 87 + 4669795 taccgtgcctctatgTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTGC-----TTTATTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134290929 87 + 135778131 taccgtgcctctatgTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTGC-----TTTATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729053 87 - 2847728 taccgtgcctctatgTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGTTGATTTGTC--TTTTTTTAATATACATGTGC-----TTTATTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858414 87 + 2368649 taccttgcctctatgTTTGTGTCCCTTCTCAGTCCCTTCTGTTGCACTGATGATTTGTC--TTTTTTTAATATATATGTGC-----TTTATTTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13080914 83 - 14256875 taccttgcttc----tttgTGTCCCTCCTCAGTCACTTCTGTGGTGCTGCTGATTTATC--TTTTTTAAATAAACATGTGC-----tttattta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976801 83 - 2196201 tactttgcctc----tTCATGTCCCTCCTCAATCACTTCTGTGGTGCTGTTGATTTATC--TTTTTTAAATAAACATGTGC-----TTTATTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370691 83 - 5030052 taccttgcctc----tttgTGTCCCTCCTTAGTCACTTCTGTGGTGCTGTTGATTTATC--TTTTTTAAATAAACATGTGC-----tttatttg i aotNan1.NW_018492112v1 C 0 I 6 s otoGar3.GL873580 11217937 91 - 11315646 AACATTGTCTTTATCTTTGCTCTCCTCCTCATTCCCTTCTGTTTTACGCTTGATTTGTC--ATTTTTT-ATGTACATGTTCATTTATTTAttta i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86565265 56 - 129401213 ----------------------------TAAGTTA-TCCCATTGTTCTGCTGGTTTA----TTTTTTAAAAGAATATGTGG-----Ctcatagg i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=93300.000000 s hg38.chr4_KI270789v1_alt 85430 12 + 205944 CTGCaattgaca s panTro5.chr4 192877075 12 + 194502333 CTGCaattgaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760898 12 + 195804263 CTGCaattgaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797316 12 + 4876863 CTGCaattgaca i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968759 12 + 190429646 CTGCaattgaca i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187912033 12 + 189454096 ctgcaattgaca i macFas5.chr5 C 0 I 3 s macNem1.NW_012013133v1 24298253 12 - 25927173 CTGCaactgaca i macNem1.NW_012013133v1 C 0 I 3 s cerAty1.NW_012001672v1 3332720 12 + 4669795 CTGCaattgaca i cerAty1.NW_012001672v1 C 0 I 3 s chlSab2.chr7 134291016 12 + 135778131 CTGCaattgaca i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012102221v1 2729140 12 - 2847728 CTGCaattgaca i manLeu1.NW_012102221v1 C 0 I 3 s colAng1.NW_012116221v1 858501 12 + 2368649 CTGCaattgaca i colAng1.NW_012116221v1 C 0 I 3 s saiBol1.JH378165 13080997 12 - 14256875 ctgtagttgaca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976884 12 - 2196201 CTGTagttgaca i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11218028 12 - 11315646 ttttaattggca i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86565321 12 - 129401213 ctgcagtggtaa i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e aotNan1.NW_018492112v1 3370774 6 - 5030052 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=273068.000000 s hg38.chr4_KI270789v1_alt 85442 35 + 205944 aataattgtatc-atttatggcattcaacacagtgt s panTro5.chr4 192877087 35 + 194502333 aataattgtatc-atttatggcattcaacacagtgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760910 35 + 195804263 aataattgtatc-atttatggcattcaacacagtgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797328 35 + 4876863 aataattgtatc-atttatggcattcaacacagtgt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968774 36 + 190429646 aataattgtgtctatttatggcattcaacacagtgt i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187912048 36 + 189454096 aataattgtgtctatttatggcattcaacacagtgt i macFas5.chr5 I 3 C 0 s macNem1.NW_012013133v1 24298268 36 - 25927173 aataattgtgtctatttatgacattcaacacagtgt i macNem1.NW_012013133v1 I 3 C 0 s cerAty1.NW_012001672v1 3332735 34 + 4669795 aataattgtgtctatttatggcattca--acagtgt i cerAty1.NW_012001672v1 I 3 C 0 s chlSab2.chr7 134291031 36 + 135778131 aataattgtgtctatttatggcattcaacacagtgt i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012102221v1 2729155 36 - 2847728 aataattgtgtctatttatggcattcaacacagtgt i manLeu1.NW_012102221v1 I 3 C 0 s colAng1.NW_012116221v1 858516 36 + 2368649 aataattgtgtctatttatggcattcaacacagtgt i colAng1.NW_012116221v1 I 3 C 0 s saiBol1.JH378165 13081009 33 - 14256875 ---aattgtacttatttatggcattcaacacagtgt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976896 36 - 2196201 aataattgtatttatttatggcattcaacacactgt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370780 36 - 5030052 aataattgtatttatttatggcattcaacacagtgt i aotNan1.NW_018492112v1 I 6 C 0 s otoGar3.GL873580 11218040 35 - 11315646 -aaaattatacctatttatgtcatacaacatgatgt i otoGar3.GL873580 C 0 I 4389 s mm10.chr8 86565333 29 - 129401213 actgacta-------ctattacattgctcactgcac i mm10.chr8 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e nomLeu3.chr7b 112686803 319 + 115148730 I a score=44578.000000 s hg38.chr4_KI270789v1_alt 85477 7 + 205944 gtggttt s panTro5.chr4 192877122 7 + 194502333 gtggttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760945 7 + 195804263 gtggttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797363 7 + 4876863 gtggtgt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968810 7 + 190429646 gtgtttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187912084 7 + 189454096 gtgtttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298304 7 - 25927173 gtgattt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332769 7 + 4669795 gtgtttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291067 7 + 135778131 gtgtttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729191 7 - 2847728 gtgtttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858552 7 + 2368649 gtgtttt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081042 7 - 14256875 gtggctt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976932 7 - 2196201 gtgggtt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3370816 7 - 5030052 gtggctt i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86565362 7 - 129401213 atagttt i mm10.chr8 C 0 I 2386 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e nomLeu3.chr7b 112686803 319 + 115148730 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=990914.000000 s hg38.chr4_KI270789v1_alt 85484 145 + 205944 ttcct------ttttttttttttt--attttgagacagagtcttgctctgtcaatgaggctggagtgcagtggcatgatctccgctcactgcagcctctgcttgctgggcttaagcgattctcctgtctcaaccttccaagtagctggggcca s panTro5.chr4 192877129 150 + 194502333 ttcctttt-tcttttttttttttt--attttgagacagagtcttgctctgtcaatgaggctggagtgcagtggcatgatctccactcactgcagcctctgcttgctgggcttaagtgattctcctgtctcaaccttccaagtagctggggcca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192760952 148 + 195804263 ttcctttt---ctctttttttttt--attttgagacagagtcttgctctgtcaatgaggctggagtgcagtggcatgatctccactcactgcagcctctgcttgctgggcttaagtgattctcctgtctcaaccttccaagtagctggggcca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797370 151 + 4876863 ttcctttttttttttttttttttt--attttgagacagagtcttgctctgtcaatggggctggagtgcagtggcatgatctccgcccactgcagcctctgcttgctgggcttaagcgattctcctgtctcaaccttccaagcagctggggcca i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188968817 152 + 190429646 tttcttttttcttttctttttttt-aattttgagacagagtattgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcgattctcctgtcttaaccttccaagtagctggggcca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187912091 152 + 189454096 tttcttttttcttttctttttttt-aattttgagacagagtattgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcgattctcctgtcttaaccttccaagtagctggggcca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298311 152 - 25927173 tttcttttttcttttctttttttt-aattttgagacagagtattgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcgattctcctgtcttaaccttccaagtagctggggcca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332776 151 + 4669795 tttcttttttcttttctttttttt--attttgagacagagtattgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcgattctcctgtcttaaccttccaagtagctggggcca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291074 147 + 135778131 tttctt-----tttttgctttttt-tattttgagacagagtattgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcaattctcctgtcttaaccttccaagtagctggggcca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729198 152 - 2847728 tttcttttttcttttctttttttt-tattttgagacagagtgttgctctgtcactgaggctggagtacagtggcatgatctcagctcacggcagcctctgcctgctgggctcaagcgattctcctgttttaaccttccaagtagctggggcca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858559 153 + 2368649 tttcttttttcttttctttttttttaattttgagacagagtcttgctctgtcactgaggctggagtacagtggcatgatctcagctcacagcagcctctgcctgctgggctcaagcgattctcctgtcttaaccttccgagtagctggggcca i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081049 143 - 14256875 ttccctttttcc--------tttc-ttttttgagacagagctttgctctgttactgaagctggagtgcagtggtgcaatctcacctcactgcagcctctgcctcctgggatctggcaatcctccggcctcaacctcccaa-taactgggacca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 976939 143 - 2196201 tttcttttttcc--------tttc-ttttttgagacagagccttgctctgttactgaggctggggcacagtggcacggtctcacctcactgcagcctctgcctcctgggacctggcgattctacggcctcaacctcccaa-taactgggacca i cebCap1.NW_016107886v1 C 0 I 41 s aotNan1.NW_018492112v1 3370823 151 - 5030052 tttcttttttccttttttcttttc-ttttttgagacagaggcttgctctgttactgaggctggagtgcagtggcacgatctcacctcactgcagcctctgcctcctgggatctggcgattctccggcctcaacctcccaa-taactgggacca i aotNan1.NW_018492112v1 C 0 I 45 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e nomLeu3.chr7b 112686803 319 + 115148730 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=116889.000000 s hg38.chr4_KI270789v1_alt 85629 26 + 205944 tccaggcatgcaccaccgtgcctgaa--------- s panTro5.chr4 192877279 26 + 194502333 tccaggcatgcaccactgtgcctgga--------- i panTro5.chr4 C 0 I 12 s panPan2.chr4 192761100 26 + 195804263 tccaggcatgcaccactgtgcctgga--------- i panPan2.chr4 C 0 I 24 s gorGor5.CYUI01015356v1 3797521 26 + 4876863 tccaggcatgcaccaccgtgcctgga--------- i gorGor5.CYUI01015356v1 C 0 I 4 s rheMac8.chr5 188968969 26 + 190429646 tccaggcatgcaccactgtgtctgga--------- i rheMac8.chr5 C 0 I 24 s macFas5.chr5 187912243 26 + 189454096 tccaggcatgcaccactgtgtctgga--------- i macFas5.chr5 C 0 I 24 s macNem1.NW_012013133v1 24298463 26 - 25927173 tccaggcatgcaccactgtgtctgga--------- i macNem1.NW_012013133v1 C 0 I 24 s cerAty1.NW_012001672v1 3332927 26 + 4669795 tccaggcatgcaccactgtgtctgga--------- i cerAty1.NW_012001672v1 C 0 I 24 s chlSab2.chr7 134291221 26 + 135778131 tccaggcatccaccactgtgtctgga--------- i chlSab2.chr7 C 0 I 24 s manLeu1.NW_012102221v1 2729350 26 - 2847728 tccaggcatgcaccactgtgtctgga--------- i manLeu1.NW_012102221v1 C 0 I 32 s colAng1.NW_012116221v1 858712 26 + 2368649 tccaggcatgcaccactgtgtctgga--------- i colAng1.NW_012116221v1 C 0 I 25 s saiBol1.JH378165 13081192 15 - 14256875 --------------------attggataatttaat i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977082 41 - 2196201 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e aotNan1.NW_018492112v1 3370974 45 - 5030052 I e nomLeu3.chr7b 112686803 319 + 115148730 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=64085.000000 s hg38.chr4_KI270789v1_alt 85655 14 + 205944 -ttatttatttattt s panTro5.chr4 192877317 14 + 194502333 -ttatttatttattt i panTro5.chr4 I 12 C 0 s panPan2.chr4 192761150 14 + 195804263 -ttatttatttattt i panPan2.chr4 I 24 C 0 s gorGor5.CYUI01015356v1 3797551 14 + 4876863 -ttatttatttattt i gorGor5.CYUI01015356v1 I 4 C 0 s nomLeu3.chr7b 112687122 14 + 115148730 -ttatttatttattt i nomLeu3.chr7b I 319 C 0 s rheMac8.chr5 188969019 13 + 190429646 -ttatttattt-ttt i rheMac8.chr5 I 24 C 0 s macFas5.chr5 187912293 13 + 189454096 -ttatttattt-ttt i macFas5.chr5 I 24 C 0 s macNem1.NW_012013133v1 24298513 13 - 25927173 -ttatttattt-ttt i macNem1.NW_012013133v1 I 24 C 0 s cerAty1.NW_012001672v1 3332977 13 + 4669795 -gtatttattt-ttt i cerAty1.NW_012001672v1 I 24 C 0 s chlSab2.chr7 134291271 13 + 135778131 -ttatttattt-ttt i chlSab2.chr7 I 24 C 0 s manLeu1.NW_012102221v1 2729408 13 - 2847728 -ttatttattt-ttt i manLeu1.NW_012102221v1 I 32 C 0 s colAng1.NW_012116221v1 858763 14 + 2368649 -ttgtttgtttgttt i colAng1.NW_012116221v1 I 25 C 0 s saiBol1.JH378165 13081207 14 - 14256875 ttaattaattt-ttt i saiBol1.JH378165 C 0 I 11 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977082 41 - 2196201 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e aotNan1.NW_018492112v1 3370974 45 - 5030052 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 85669 1 + 205944 g s panTro5.chr4 192877331 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761164 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797565 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687136 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969032 1 + 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187912306 1 + 189454096 g i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298526 1 - 25927173 g i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332990 1 + 4669795 g i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291284 1 + 135778131 g i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729421 1 - 2847728 g i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858777 1 + 2368649 g i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081232 1 - 14256875 g i saiBol1.JH378165 I 11 C 0 s aotNan1.NW_018492112v1 3371019 1 - 5030052 g i aotNan1.NW_018492112v1 I 45 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977082 41 - 2196201 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=1464672.000000 s hg38.chr4_KI270789v1_alt 85670 169 + 205944 tagagccctcttatagaagtctccctatatttcccaggctggtctcaaactcctgggct-cagcaatcctcctgccttggcctcccaaaagccctgggattacagatgtgaaccgctgcacctggcctaacatgaggttttgaaatacatatatattgtgaaatggataa s panTro5.chr4 192877332 169 + 194502333 tagagccctcttatagaagtctccctatatttcccaggctggtctcaaactcctgggct-cagcaatcctcctgccttggcctcccaaaagccctgggattacagatgtgaacccgtgcacctggcctaacatgaggttttgaaatacatatatattgtgaaatggataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761165 169 + 195804263 tagagccctcttatagaagtctccctatatttcccaggctggtctcaaactcctgggct-cagcaatcctcctgccttggcctcccaaaagccctgggattacagatgtgaacccctgcacctggcctaacatgaggttttgaaatacatatatattgtgaaatggataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797566 169 + 4876863 tagagccctcttatagaagtctccctatatttcccaggctggtctcaaactcctgggct-cagcaatcctcctgccttggcctcccaaaagccctgggattacagatgtgaactgctgcacctggcctaacatgaggttttgaaatacatatatattgtgaaatggataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687137 169 + 115148730 TAGAGGCCTCTTATAgaagtctccctgtatttcccaggctggtctcaaactcctgggct-cagcaatcctcctgccttggcctctcaaaagccctgggattacagatgtgaaccactgcacctggccTaacatgatgttttgaaaaacatatatattgtgaaatggataa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969033 169 + 190429646 tagagcccttttatagaagtctccctatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatatgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187912307 169 + 189454096 tagagcccttttatagaagtctccctatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatatgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i macFas5.chr5 C 0 M 792 s macNem1.NW_012013133v1 24298527 169 - 25927173 tagagcccttttatagaagtctccctatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatatgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3332991 169 + 4669795 tagagcccttttatagaagtctccctatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatatgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291285 169 + 135778131 tagagcccttttatagaaatctccctatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatttgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729422 169 - 2847728 tagagcccttttatagaagtctccgtatatttcccaggctggtctcaaactcctgggtt-aagcaatcctcctgccttggcctcccaaaagccctgggattacagatatgaaccactgcacctggcctaacatgatgttttgaaatacatatatattgtgaaatggataa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858778 169 + 2368649 tagagcccttttatagaaatctccctatatttcccagtttggtctcaaactcctgggct-cagcaatcctcctgccttggcctcccaaaagccctgggattacagatgtgaaccactgcacgtggcctaacatgatgttttgaaatacatgtatattgtgaaatggataa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081233 169 - 14256875 tagagcccttttatagaagtcgccctgtatttccaaggctggtttgaaactcctgggataaagcaattctcctgccttggcctccc-aaagcgctgggattacaggtgtgaaccactgcacctagcctaacatactgttttgaaacatgtgtacattgtggattcggtaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977123 169 - 2196201 tagagcccttttatagaaatcaccctgtatttcccaggctggtctgaaactcctgggataaagcaatcctcccgccttggcctccc-aaagtgctgggattacaggtgtgaaccactgcacctagcctaacatactgttttgaaacacgtatacattgtggattcggtaa i cebCap1.NW_016107886v1 I 41 C 0 s aotNan1.NW_018492112v1 3371020 169 - 5030052 tagagcccttttatagaagtcgccctgtatttcccaggctggtctgaaacttctgggctgaagcaatcctcctgccttggcctccc-aaagcgctgggattacaggtgtgaaccactgcacctggcctaacatactgttttgaaacacgtatacattgtggattcggtaa i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=535609.000000 s hg38.chr4_KI270789v1_alt 85839 79 + 205944 atctagctaaacacatac---ttatttttttatctgtggtgagaccacttaaagcctactctttcagcaattttaaagtata s panTro5.chr4 192877501 79 + 194502333 atctagctaaacacatac---ttttttttttgtctgtggtgagactgcttaaagcctactctttcagcaattttcaagtata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761334 78 + 195804263 atctagctaaacacatac---tt-ttttttggtctgtggtgagactgcttaaagcctactctttcagcaattttcaagtata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797735 78 + 4876863 atctagctaaacgcatac---tt-attttttgtctgtggtgagaccacttaaagcctactctttcagcaattttaaagtata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687306 79 + 115148730 atctagctaaacacatac---ttttttttttgtttgtggtgagaccacttacagcctactctttcagcaattttcaggtatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969202 79 + 190429646 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcctactctttcagcaattttgaagtata i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298696 79 - 25927173 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcctactctttcagcaattttgaagtata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333160 79 + 4669795 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcctactctttcagcaattttgaagtata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291454 79 + 135778131 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcctactctttcggcaattttcaagtata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729591 79 - 2847728 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcctactctttcagcaattttgaagtata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 858947 79 + 2368649 atctagctaaacacatac---ttatttttttgtttgtggtgagaccacttaaagcccactctttcagcaattttcaagtata i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081402 82 - 14256875 atgtagctaaacatgtaacttttgtttgtttgtttgtggtgggatcacttacagcctactcctttagcaattttcaagcagg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977292 82 - 2196201 atgtagctaaacacgtaccttttgtttgtttgtttgtgttaagatcacgtacagcctactcttttagcaattttcaagtaca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3371189 82 - 5030052 atgtaactaaacacgtaccttttgcttgtttgtttgtggtgagatcacttacagcctactcttttagcaatcgtcaagtaca i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914421 306 + 3993831 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=419153.000000 s hg38.chr4_KI270789v1_alt 85918 54 + 205944 tcaccatggggtacaatagatctcttagacctgtccctactgtctagatggcat s panTro5.chr4 192877580 54 + 194502333 tcaccatggggtacaatagatctcttagacctgtccctactgtctaggtggcat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761412 54 + 195804263 tcaccatggggtacaatagatctcttagacctgtccctactgtctaggtggcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797813 54 + 4876863 tcaccatggggtacaatagatctcttagacctgtccctactgtctagatggcat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687385 54 + 115148730 tcaccatggggtacaacagatctcttagacctgtccttactgtctagatgacat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969281 54 + 190429646 tcagcatggggtacaacagatctcttagacctgtccctgctgtctggatgacat i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298775 54 - 25927173 tcagcatggggtacaacagatctcttagacctgtccctgccgtctggatgacat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333239 54 + 4669795 tcagcatggggtacaacagatctcttagacctgtccctgctgtctggatgacat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291533 54 + 135778131 tcagcatggggtacaacagagctcttagacttgtccctattgtctggatgacat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729670 54 - 2847728 tcagcatggggtacaacagatctcttagacctgtccctgttgtctggatgacat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859026 54 + 2368649 tcaccatggggtacaacagatctcttagacctgtccctgctgtctggatgacat i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081484 54 - 14256875 tcaccgtggggtacaatagatctcttgcacctgttcctgctgtccagatgacat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977374 54 - 2196201 tcaccgaggggtacaatagatctcttgcacctgttcctgctgtctagatgacat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3371271 51 - 5030052 tcac---aggggaccacagacctcttgcacctgttcctgctgtctagatgacat i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3914727 54 + 3993831 tcaccatgatgtacaatagatctcttggacttattctttctgcctcactgacac i proCoq1.NW_012145301v1 I 306 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17491246 329 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=805614.000000 s hg38.chr4_KI270789v1_alt 85972 83 + 205944 tttgcatcctttgaccaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGCAGAACTTTGGTCGTCGTG s panTro5.chr4 192877634 83 + 194502333 tttgcatcctttgaccaacatGCTGATTTATCTTTAACATATTGTATTGCTACCCTGTGGTAGGCAGAACTTTGGTCCTCGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761466 83 + 195804263 tttgcatcctttgaccaacatGCTGATTTATCTTTAACATATTGTATTGCTACCCTGTGGTAGGCAGAACTTTGGTCCTCGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797867 83 + 4876863 tttgcatcctttgaccaacGTGCTGATTTATCTTTAACATATTGTATTGCTACCTCGTGGTAGGCAGAACTTTGGTCCTCGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687439 83 + 115148730 tttgcgtcctttgaccaacatGCTGATTTATCTTTAACGTATTGTTTTGCTACCTTGTGGTAGGCAGAACTTTGGTCGTTGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969335 83 + 190429646 tttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGTAGAGCTTTGGTCCTCGTG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298829 83 - 25927173 tttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGTAGAGCTTTGGTCCTCGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333293 83 + 4669795 tttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGCAGAGCTTTGGTCCTCGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291587 83 + 135778131 gttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGCAGAGCTTTGGTCCTTGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729724 83 - 2847728 tttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTAGGCAGAGCTTTGGTCCTCGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859080 83 + 2368649 tttgcatcctttgacgaacatGCTGATTTATCTTTAACATATTGTATTGCTACCTTGTGGTGGGCAGAACTTTGGTCCTCATG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081538 83 - 14256875 gttgcattctttgaccaacatACTGATTGATCTTTAACATATTGTATTGCTACCTTGTGGTGGGCAGAACTTTGGTCCTCGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977428 83 - 2196201 tttgcatcctttgaccaacgtGCTGATTGATCTTTAACACATTGTATTGCTACCTTGTGGTGGGCAGAACTTTGGTCCTCGTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3371322 83 - 5030052 tttgcatcctttgaccaacaCACTGATTGATCTTTAACATATTATATTGCTATCTtgtggtgggcagaactttggtcctcatg i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17491575 83 - 93316391 tttgtatcctttggccaacaCGTTGATTCATCTTTAACATGTTACATTGCTACCTTCCGATAGGCAGAACTTTGGTGGTCATG i micMur3.chr14 I 329 C 0 s proCoq1.NW_012145301v1 3914781 83 + 3993831 tttgtatcctttggccaacatGTTCATTCATCTTTAACATGTTATATTGCTACCTTCTGATAGGCAGAATTTTGGTCTTCATG i proCoq1.NW_012145301v1 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e canFam3.chr16 16934320 657 - 59632846 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=105696.000000 s hg38.chr4_KI270789v1_alt 86055 9 + 205944 ATCTCAGCC s panTro5.chr4 192877717 9 + 194502333 ATCTCAGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761549 9 + 195804263 ATCTCAGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797950 9 + 4876863 ATCTCAGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687522 9 + 115148730 ATCTCAGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969418 9 + 190429646 ATCTCAGCC i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298912 9 - 25927173 ATCTCAGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333376 9 + 4669795 ATCTCAGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291670 9 + 135778131 ATCTCAGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729807 9 - 2847728 ATCTCAGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859163 9 + 2368649 ATCTCAGCC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081621 9 - 14256875 ATCTCAGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977511 9 - 2196201 ATCTCAGCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3371405 9 - 5030052 atctcagcc i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17491658 9 - 93316391 ATCTCAGCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3914864 9 + 3993831 ATCTCAGCC i proCoq1.NW_012145301v1 C 0 I 673 s canFam3.chr16 16934977 9 - 59632846 ATCTTTATT i canFam3.chr16 I 657 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=131957.000000 s hg38.chr4_KI270789v1_alt 86064 17 + 205944 ACCTAGCGTTACATCCt------- s panTro5.chr4 192877726 17 + 194502333 ACCTAGCGTTACATCCt------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761558 17 + 195804263 ACCTAGCGTTACATCCt------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797959 17 + 4876863 ACCTAGCGTTACATCCt------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687531 17 + 115148730 ACCTAGTGTTACATCCt------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969427 17 + 190429646 ACCTAGTGTTACGTCCt------- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298921 17 - 25927173 ACCTAGTGTTACGTCCt------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333385 17 + 4669795 ACCTAGTGTTACGTCCt------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291679 17 + 135778131 ACCTAGTGTTACATCCt------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729816 17 - 2847728 ACCTAGTGTTACGTCCt------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859172 17 + 2368649 ACCTAGTGTTACATCCt------- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081630 17 - 14256875 ATCTAGTTTCACAGCCT------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 977520 17 - 2196201 ACCTAGTATCACAGCCT------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3371414 17 - 5030052 acctagtgtcacagtct------- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17491667 17 - 93316391 CCCTGGTGTAACATCCT------- i micMur3.chr14 C 0 I 640 s canFam3.chr16 16934986 24 - 59632846 Acctagtattccatcaataattat i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914873 673 + 3993831 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=1889509.000000 s hg38.chr4_KI270789v1_alt 86081 246 + 205944 gttatgttacatggcaaacaggctttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacctagattatgcaggtgagctggatctaatc-tcatgagctctttaaacgtcggaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagataaagggggccaaaagccacagaatatgggtgc-cttcaaaagct s panTro5.chr4 192877743 246 + 194502333 gttatgttacatggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacctagattatgcaggtgagctggatctaatc-tcatgagctctttaaacatcggaagaggaaggtagaagagaaa--atcagagattataattgaaaaggttggagatgtcattactggcatttaagataaagggggccaaaagccatggaatatgggtgg-cttcaaaagct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761575 246 + 195804263 gttatgttacatggcaaagaggttttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacttagattatgcaggtgagctggatctaatc-tcatgagctctttaaacatcggaagaggaaggtagaagagaaa--atcagagattataattgaaaaggttggagatgtcattactggcatttaagataaagggggccaaaagccatggaatatgggtgg-cttcaaaagct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3797976 246 + 4876863 gttatgttacgtggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacctagattatgcaggtgagctggatctaatc-tcatgagctctttaaacatcggaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagataaagggggccaaaagccatggaatatgggtgg-cttcaaaagct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687548 246 + 115148730 gttatgttacatggcaaagaggctttgcagatgtaattaacgttactcctcagttgactttaagaaagggagattaacctagattacgcaggtgagctggatctaatc-tcatgagctctttaatcattggaagaggatggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcattcaagatacagggggccagaagccacggaatatggttgg-cttcaaaagct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969444 246 + 190429646 gttgtgttacatggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaggatagggagattaacctagattatccaggtgagctggatctaatc-tcacgagctcgttaaacatcagaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagatacagggggccaaaagccacagaaagtgggtag-cttcaaaagct i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24298938 246 - 25927173 gttgtgttacatggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaggatagggagattaacctagattatccaggtgagctggatctaatc-tcacgagctcgttaaacatcagaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagatacagggggccaaaagccacagaaagtgggtag-cttcaaaagct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333402 246 + 4669795 gttatgttacatggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacctagattatccaggtgagctggatctaatc-tcacgagcttgttaaacatcagaagaggagggtagaagagaaa--atcagagattataagtgaaaatgttggagatgtcgttactggcatttaagatacagggggccaaaagccccagaaagtgggtag-cttcaaaagct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291696 246 + 135778131 gttctgttacatggcaaaaaggctttgcagatgtaattaatattactcctcagttgactttaagatagggagacaaacctagattatccaggtgagctggatctaatc-tcatgagctcgttaaacatcagaagaggagggtacaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagatacagggggccaaaagccacagaaagtgggtag-cttcaaaagct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2729833 246 - 2847728 gttctgttacatggcaaagaggctttgcagatgtaattaacgttactcctcagttgactttaggatagggagattaacctagattatccaggtgagctggatctaatg-tcacgagctcgttaaacatcagaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcattactggcatttaagatacagggggccaaaagctgcagaaagtgggtag-cttcaaaagct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859189 246 + 2368649 gttatgttacatggcaaagaggctttgcagatgtaattaatgttactcctcagttgactttaagatagggagattaacctagattatccaggtgagctggatctaatc-tcatgagctcgttaaacatcagaagaggagggtagaagagaaa--atcagagattataagtgaaaaggttggagatgtcgttactggcatttaagatacagggggccaaaagccacagaatgtgggtag-cttccaaagct i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081647 237 - 14256875 gttatgtgac---------aggctttgcagatgtaattaacgttgctcctcagttgacttgaagacagagagattaatttatattatccaggtgagctggctgtaatc-tcatgagctctttaaatgtcggaagagggaggtagaagagaaa--atcagagattatatgtgaaaaggtgggacacgtcattactggtatttaagacagagggggcccaaagccaccgaatatgagtga-cttcaaaagct i saiBol1.JH378165 C 0 I 13 s cebCap1.NW_016107886v1 977537 237 - 2196201 GTTATGTGAC---------AGCCtttgcagatgtaattaatgttgctcctcagttgacttgaagatagagagattaacttatgttatccaggcgagctggatgtaatc-tcatgagctctttaaacgtcggaagagggaggcagaagagaaa--atcagagattatatttgaaaacgtgggacacgtcattactggtatttaagacagagggggctcaaagacaccgaatatgagtga-cttcaaaagct i cebCap1.NW_016107886v1 C 0 I 124 s aotNan1.NW_018492112v1 3371431 237 - 5030052 gttatgtgac---------aggctttgcagatgtaattaatgctgctcctcagttgacttgaagatagagagattaacttatattatccaggtgagccggatgtaatc-tcatgagctctttaaacttcagaagagggaggtagaagagaaa--atcaaagattatatgtgaaaaggtaggacatgtcattactggtatttaagacagagtgggcccaaaaccacggaatatgagtga-cttcaaaagct i aotNan1.NW_018492112v1 C 0 I 13 s canFam3.chr16 16935010 231 - 59632846 tttatgttacatggtagaggggctttgcagatgtaattaatattattgatcaattgacctttagataggaagattatcctagatattctatgtgagcttgaactaatcaacttgaaccctttaaa-----------------agaagggaaaatataagagattataaatacaagaa--aaaaatgccattattggctttgcatatgaaggaatccacaagccaaggaatgtggaaagtctctagaagct i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3914873 673 + 3993831 I e micMur3.chr14 17491684 640 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=2337204.000000 s hg38.chr4_KI270789v1_alt 86327 359 + 205944 ------------gagccaatagctggcaaaatcatgagaacactcactcctgtagcaacatggagctgaattctgccaacaatctaaatgagcctggaagcaggttctccctcagaggctccaaagaagagcccaggccagctgacagcttgacttgcaccttgtgtgcccctatatagagaacccagtcaagccatgctgtactcagacttccaactcatggaacctatgagataataaataggtgttgtgt-------------------taatttattatggcagcaatagcagg-ctaatacaTACTTT-AGGAACAATTAATTTCAAATTTTTGTGTGTGAACTCTCCTCATTCACTAT---CATGAC----ACACAAACACATTCACCCACAC---------------- s panTro5.chr4 192877989 359 + 194502333 ------------gagccaatagctggcaaaatcatgaggacactcactcctgtagcaacatggagctgaattctgtcaacaatctaaatgagcctggaagcaggttctccctcagaggctccaaagaagagcccaggccagctgacagcttgacttgcaccatgtgtgcccctatatagagaacccagtcaagccatgctgtactcagacttccaactcatggaacctatgagataataaataggtgttgtgt-------------------taatttattatggcagcaatagcagg-ctaatacaTACTTT-AGGGACAATTAATTTCAAATTTTTGTGTGTGAACTCTCCCCATTCACTAT---CATGAC----ACACAAACACATTCACCCACAC---------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192761821 359 + 195804263 ------------gagccaatagctggcaaaatcatgaggacactcactcctgtagcaacatggagctgaattctgtcaacaatctaaatgagcctggaagcaggttctccctcagaggctccaaagaagagcccaggccagctgacagcttgacttgcaccatgtgtgcccctatatagagaacccagtcaagccatgctgtactcagacttccaactcatggaacctatgagataataaataggtgttgtgt-------------------taatttattatggcagcaatagcagg-ctaatacaTACTTT-AGGGACAATTAATTTTAAATTTTTGTGTGTGAACTCTCCCCATTCACTAT---CATGAC----ACACAAACACATTCACCCACAC---------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798222 359 + 4876863 ------------gagccaatagctggcaaaatcgtgaggacactcactcctgtagcaacatggagctgaattctgccaacaatctaaatgagcctggaagcaggttctccctcagaggctccaaagaagagcccaggccagctgacagcttgacttgcaccttgtgtgcccctatatagagaacccagtcaagccatgctgtactcagacttccaactcatggaacctatgagataataaataggtgttgtgt-------------------taatttattatggcagcaatagcagg-ctaatacaTACTTT-AGGAACAATTAATTTCAAATTTTTGTGTGTGAACTCTCCTCATTCACAAT---CATGAC----ACACAAACACATTCACCCACAC---------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112687794 359 + 115148730 ------------gagccaatagctagcaaaatcatgaggacactcactcctatagcaacatggagctgaattccgccaacaatataaatgagcctgcaagcaggttctccctcagaggctccaaagaagagcccaggccagctgacagcttgacttgcaccttgtgagcccctatgtagagaacccagtcaagccatgctgcactcagacttctgactcatggaacctataagataataaagaggtgttgtgt-------------------taatttattatggcagcaatagcagg-ctaatacaTACTTT-AGGGACAATTAATTTCAAATTTTTGTGTGTGAACTCTCCTCATTCACTCT---CATGAC----ACACAAACACCTTCACCCACAC---------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188969690 359 + 190429646 ------------gagccaatagctagcaaaatcatgaggacactcactcctttagcaccatggagctgaattctgccaacaatctcaatgagcctggaagcaggttgtccctcagacgctccaaagaagagtccagggcagctgacagcttgacttgcaccttgtgtgcccctatatggagaacccagtcaagccatgctgtactcagacttctcactcatggcaactataagataataaataggtgttgtgt-------------------taatgtatgatggcagcaatagcagg-ttaatataTACTAT-AGGGACAATTAATTTCAAATTTCTGTGTGTGAACTCTCCTCATTCACTGT---CGTGAC----ACACAAACACATTCACACGCAC---------------- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299184 359 - 25927173 ------------gagccaatagctagcaaaatcatgaggacactcactcctttagcaccatggagctgaattctgccaacaatctcaatgagcctggaagcaggttgtccctcagacgctccaaagaagagtccaggccagcggacagcttgacttgcaccttgtgtgcccctatatggagaacccagtcaagccatgctgtactcagacttcccactcatggcaactataagataataaataggtgttgtgt-------------------taatgtatgatggcagcaatagcagg-ttaatataTACTAT-AGGGACAATTAATTTCAAATTTCTGTGTGTGAACTCTCCTCATTCACTGT---CATGAC----ACACAAACACATTCACACGCAC---------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3333648 359 + 4669795 ------------gagccaatagctggcaaaatcatgaggacactcactcctttagcaccattcggctgaattctgccaacaatctcaatgagcctgggagcaggttgtccctcagacgctccaaagaagagtccaggccagctgacagcttgacttgcaccttgtgtgcccctatatggagaacccagtcaagccatgctgtactcagacttctcactcatggcacctataagataataaataggtgttgtgt-------------------taatgtatgatggcagcaatagcagg-ctaatataTACTAT-AGGGACAATTAATTTCAAATTTGTGTGTGTGAACTCTCTTCATTCACTGT---CATGac----acacacacacattcacacgcac---------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134291942 359 + 135778131 ------------gagccaatagctagcgaaatcatgaggacactcactcctttagcaccatggagctgaattctgccaacaatctcaatgagcctggaagcaggttgtccctcagacgctccaaagaagagtccaggccagctgacagcttgacttgcgccttgtgtgcccctatatagagaacccagtcaagccgtgctgtactcagacttcccactcatggcacctatgagataataaataggtgttgtgt-------------------taatttatgatggcagcaatagcaga-ctaatataTACTAT-AGGGACAATTAATTTCAAATTTTTGTGTGTGAACTCTCCTCATTCACTGT---CGTGGC----ACACAAACACATTCACACGCAC---------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730079 356 - 2847728 ------------gagccaatagctggcaaaatcgtgaggacactcactcctttagcaccattcagctgaattctgccaacaatctcaatgagcctggaagcaggttgtccctcagacgctccaaagaagagtccaggccagctgacagcttgacttgcaccttgtgtgcccctatgtggagaacccagtcaagccatgctgtactcagacttctcactcatggcacctatgagataataaataggtgttgtgt-------------------taaTGTATGATGGCAGCAATAGCAGG-CTACTATATACTAT-AGGGACAATTGATTTCAAATTTTTGTGTGTGAact---ctcattcactgt---cgtgac----acacacacacattcacacgcac---------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859435 352 + 2368649 ------------gagccaatggctggcaaaatcgtgaggacactcactcctttagcaccatggagctgaattctgccaacaatctcaatgagcctggaagcaggttgtccctcaggggctccaaagaagagtccaggccagctgacagtttgacttgcaccttgtgtgcccctatgtagagaacccagtcaagccatgctttactcagacttcccactcatggcacctatgagataataaataggtgttgtgt-------------------taatttatgatggcagcaatagcagg-ctaatataTACTAT-AGGGACAATTAATTTCCAATTTTTGTGTGTGAACTC-------TCACTGG---CATGAC----ACACAAACACATTCACATGCAC---------------- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13081897 355 - 14256875 ------------tagccaatagctagcaaaatcacaaggacactcactcctacagcaacatggagctgaattccgccaacaatctgaatgagcctg-cagccgggtgtctctcagaggctcccaagaagagcccaggccagctggcagctcgagtcacaccttgcgtgcccctgta-ggagaacacaatcaagccaggctgtacccacgcttctgactcatggaaactaggaggtgataaataggagttgtgt-------------------taatttattatggcagcagtagcagg-ctaatgcaTACTTT-AGGGGCAATTAACTTCAATGTTTTGTGTGTGAGCCCTCTTCATTCACTA-----GTGAC----ACACAAAGACCTTCACACACAC---------------- i saiBol1.JH378165 I 13 M 1127 s aotNan1.NW_018492112v1 3371681 355 - 5030052 ------------tagccaatagctaacaaaatcacgaggacactcactcctacagcaacatggagctgaattccgccaacaatctgaatgagcctg-aagcaggttgtctctcagaggctcccaagaagagcccaggccatctggcagcttgattcgcaccttgcgtgccccagta-ggagaacgcaatcaagccaggctgtacccagacttctgactcgtggaaactaggaggcgataaataggagttgtgt-------------------taatttattatggcagcaatagcagg-ctaatgcaTACTTT-AGGGACAATTAACTTCAATGTTTTGTGTGTGAACCCTCTTCATTCACTA-----ATGAC----ACACAAAGACGTCCACACACAT---------------- i aotNan1.NW_018492112v1 I 13 C 0 s canFam3.chr16 16935241 393 - 59632846 gagaataatccccatccaacagtcatcagaaaaacagaaac-----ctccttttacaacatgcaactgaaatctgccaacagtctgaatgagcctggaaacagatttttcctcagagcctccaaa-aagagcatgggtgagggggcagt-----------cttgtgagaccctaagcagagaacctggctgagccacaccatgccgcaacttgtgatccatagaaatgatgagataagaaatgggcattgcattaagtggttaagtctatcataatttattatggcagcaataaaaaacctaatataTACCCTCAGGGACAATTAATTTCAAAATGTTCTGTGAA-----TCCTCATTTACCATGACCATGACATAAACATACACATACTCACATGTACATGCACACATTCACGC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977774 124 - 2196201 I e proCoq1.NW_012145301v1 3914873 673 + 3993831 I e micMur3.chr14 17491684 640 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=225528.000000 s hg38.chr4_KI270789v1_alt 86686 39 + 205944 ACTCTCAGAGATACTCAAGTTGTATACTTCCAGAAGAGG s panTro5.chr4 192878348 39 + 194502333 ACTCTCAGAGATACTCAAGTTGTATACTTTCAGAAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762180 39 + 195804263 ACTCTCAGAGATACTCAAGTTGTATACTTTCAGAAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798581 39 + 4876863 ACTCTCAGAGATACTCAAGTTGTATACTTTCAGAAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688153 39 + 115148730 ACTCTCAGAGATACTCAAGTTGTATACTTTCAGAAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970049 39 + 190429646 ACTCTTACAGATACTCAAGTTGTATACTTTCAGAAGAGG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299543 39 - 25927173 ACTCTTACAGATACTCAAGTTGTATACTTTCAGAAGAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334007 39 + 4669795 acTCTTACAGATACTCAAGTTGTATACTTCCAGAAGAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292301 39 + 135778131 ACTCTTACAGATACTCAAGTTGTATACTTTCAGAAGAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730435 39 - 2847728 acTCTTAGAGATACTCAAGTTGTATACTTCCAGAAGAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859787 39 + 2368649 ACTCTTAGAGATACTCAAGTTGTATACTTTCAGAAGAGG i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3372036 39 - 5030052 GCTCTCAGAGATACTCAAGGTGTGGTCTTTCAGAATAGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16935634 36 - 59632846 AAACTCAGA---ACTCAATTTGAAGTTGTTTAGAATAGG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977774 124 - 2196201 I e proCoq1.NW_012145301v1 3914873 673 + 3993831 I e micMur3.chr14 17491684 640 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=641397.000000 s hg38.chr4_KI270789v1_alt 86725 88 + 205944 --CTTTCTCTGTTTTTAAAGTCTGAAGTTCTCAGCATTCTCACTGAGCCATGCTATCACTTTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT s panTro5.chr4 192878387 86 + 194502333 --CTT--TCTGTTTTTAAAGTCTATGGTTCTCAGCATTCTCACTGAGCCATGCTATCACTTTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i panTro5.chr4 C 0 I 1 s panPan2.chr4 192762219 86 + 195804263 --CTT--TCTGTTTTTAAAGTCTGTGGTTCTCAGCATTCTCACTGAGCCATGCTATCACTTTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3798620 88 + 4876863 --CTTTCTCTGTTTTTAAAGTCTGAAGTTCTCAGCATTCTCACTGAGCCATGCTATCACTTTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112688192 88 + 115148730 --CTTTCTCTGTTTTTAAAGTCTGCGGTTCTCAGCATTCTCACTGAGCCATGCCGTCACTTTT-GTGTCACTTCGGA-CAGCCTTTCCTGCT i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 188970088 88 + 190429646 --CTCTCTCTGTTTTTAAAGTCTACGGTTCTCAGCATTCTTACCGAGGCACACTATCACTTTT-GTGTCACTTTGGA-CAGCCTTTCCTGCT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299582 87 - 25927173 --CTCTCTCTGTTTTTAAAGTCTACGGTTCTCAGCATTCTTACCGAGGCATGCTATCAC-TTT-GTGTCACTTTGGA-CAGCCTTTCCTGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334046 85 + 4669795 --CTCTCTCTGTTTTTAAAGTCTACGGT--TCAGCATTCTTACCGAGGCATGCTATCAC-TTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292340 88 + 135778131 --CTTTCTCTGTTTTTAAAGTCTACGGTTCTCAGCATTCGTACCAAGGCATGCTATTCC-TTTCGTGTCACTTTGGA-CAGCCTTCCCTGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730474 85 - 2847728 --CTCTCTCTGTTTTTAAAGTCTACGGT--TCAGCATTCTTACCGAGGCATGCTATCAC-TTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859826 88 + 2368649 --CTTTCTCTGTTTTTAAAGTCTACGGTTCTCAGCATTCTTACCAAGGCATGCTATCACTTTT-GTGTCACTTTGGA-CAGCCTTCCCTGCT i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3372075 88 - 5030052 --CTTTTTCTGTTTTTAAAGGCTGCAGTTCTCAGCATTCTTACTGAGCCATGCCATCGATTTT-GTGTCGTTTTGGA-CAGCCTTCCCTGCT i aotNan1.NW_018492112v1 C 0 I 1 s micMur3.chr14 17492324 88 - 93316391 --CTTTCTCTGTTTTTAAAGTCTGTGATTCTCAATATTCTTACTGAGCCATACTATTTCTTTT-GTGTCATTTTGGG-CAACCTTCTCTGCT i micMur3.chr14 I 640 I 112 s proCoq1.NW_012145301v1 3915546 88 + 3993831 --CTTTCCCTGTTTCTAAAGTCTGTGATTCTCAACATTTTTACTGAGCCATATTATTACTTTT-GTGTCATTTTGGG-CAACCTTCTCTGCT i proCoq1.NW_012145301v1 I 673 I 112 s canFam3.chr16 16935670 90 - 59632846 CTCTTTCTCTGCTCTTAAAGCCTTTGATTCTCAGCATTGTCACTGAGCCTTGCTATTAG-TTT-GTATCATTTTACATTAATCTTCCCTACT i canFam3.chr16 C 0 I 1 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977774 124 - 2196201 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=670245.000000 s hg38.chr4_KI270789v1_alt 86813 115 + 205944 TCTGTCATCCTCAACTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCTC----AGTTCTTTTGTTTTCTGTTAATATTAGGACCTGATTA----------------------------TATACACAGCTAGTCCACA s panTro5.chr4 192878474 115 + 194502333 TCTGTCATCCTCAACTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCGC----AGTTCTTTTGTTTTCTGTTAATTTAAGGACCTGATTA----------------------------TATACACAGCTAGTCCACA i panTro5.chr4 I 1 C 0 s panPan2.chr4 192762306 115 + 195804263 TCTGTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCGC----AGTTCTTTTGTTTTCTGTTAATTTAAGGACCTGATTA----------------------------TATACACAGCTAGTCCACA i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3798709 115 + 4876863 TCTGTCATCCTCAACTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCTC----AGTTCTTTTGTTTTCTGTTAATTTTAGGACCTGATTA----------------------------TATACACAGCTAGTCCACA i gorGor5.CYUI01015356v1 I 1 C 0 s nomLeu3.chr7b 112688281 115 + 115148730 TCTGTCATCCTCAGCTTTTTCTTGCATTGTCTGCTTTCCCTTTTC--------CCTGTTGGCACCTC----AGTTCTTTTGTTTTCTGTTAATTTTAGGACCTGATTA----------------------------TATACACAGCTAGTCCACA i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188970176 112 + 190429646 ---GTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCGTTTC--------CCTGTTTGCACCTC----AGTTCTTTTACTTTCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299669 108 - 25927173 ---GTCATCCTCAGCTTTTTCTTGCAT----TGTTTTCCCTTTTC--------CCTGTTTGCACCTC----AGTTCTTTTGTTTTCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334131 112 + 4669795 ---GTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCTC----AGTTCTTTTGTTTTCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292428 112 + 135778131 ---GTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGTACCTC----AGTTCTTTTGTTTTCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730559 112 - 2847728 ---GTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCTC----GGTTCTTTTGTTTTCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 859914 112 + 2368649 ---GTCATCCTCAGCTTTTTCTTGCATTGTCTGTTTTCCCTTTTC--------CCTGTTTGCACCTC----AGTTATTTTGTTTCCTGTTAATTTTAGAACCTGATTA----------------------------TATACACAGCTAGTCCACA i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3372164 115 - 5030052 CCTGTCATCCTCAGCTTTTTCTTGTGTTGTCTTTTTTCCCTTTTT--------CCCGTTTGCACCTC----AGTTCTTTTGTTTTCTATTAATTTTATGACCTAATTA----------------------------TATATACAGCTAGTCAACC i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 16935761 155 - 59632846 TCTGTCACCCTCAGCATTTTCCTGTTTTACTTTTTTTCTCTTTGCTTTTATCTCCTTCTGATGCTTCTCATAGTCCCTTGGTTTTCTGTTAATTCAATAacataattgttaataattgtacataattgtacataattgtaTACAGCTAGTTAATC i canFam3.chr16 I 1 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977774 124 - 2196201 I e proCoq1.NW_012145301v1 3915634 112 + 3993831 I e micMur3.chr14 17492412 112 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=549277.000000 s hg38.chr4_KI270789v1_alt 86928 71 + 205944 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA s panTro5.chr4 192878589 71 + 194502333 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762421 71 + 195804263 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798824 71 + 4876863 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGATATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688396 71 + 115148730 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGACATTGCATTG-----TGTGGAGTGTTTGCATCTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970288 72 + 190429646 AACACATGTATAGTTTTCTTCA-CAAAAAATCAAGGGAAGGACTTTGCATTG-----TGTGAAGTGTTTGCATCTTTA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299777 71 - 25927173 AACACATGTATAGTTTTCTTCA-CAGAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334243 71 + 4669795 AACACATGTATAGTTTTCTTCA-CAGAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292540 72 + 135778131 AACACATGTATAGTTTTCTTCA-CAAAAAATCAAGGGAAGGACTTTGCATTG-----TGTGAAGTGTTTGCATCTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730671 71 - 2847728 AACACATGTATAGTTTTCTTCA-CAGAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860026 71 + 2368649 AACACATGTATAGTTTTCTTCA-CAAAAAATCAA-GGAAGGACATTGCATTG-----TGTGAAGTGTTTGCATCTTTA i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3372279 71 - 5030052 AACACATGTATAGTTTTCATCA-CAAAAAATCAA-GGAAGGACATTACATTG-----TGTGAAATGCTTGCATCTTTA i aotNan1.NW_018492112v1 C 0 I 328 s micMur3.chr14 17492524 72 - 93316391 AACACATGTATATTTTTCCTAATCAAAAAATCAA-GGAAACATGTTGTATTA-----TGTGAAATGTTTGCTTCTTTA i micMur3.chr14 I 112 C 0 s proCoq1.NW_012145301v1 3915746 72 + 3993831 AACACATGTATATTTTTCCTCATCAGAAAATCAA-GGAAACGTGTTGTATTA-----CGTGAAGAGTTCGCTTCTTTA i proCoq1.NW_012145301v1 I 112 C 0 s canFam3.chr16 16935916 65 - 59632846 AACACATGTATATTTTTCT----TAGTAAGTAAA-GAAAGCACATTGCATTGCACTATGTGAAGTGTTTT-------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e cebCap1.NW_016107886v1 977774 124 - 2196201 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=351028.000000 s hg38.chr4_KI270789v1_alt 86999 36 + 205944 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG s panTro5.chr4 192878660 36 + 194502333 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762492 36 + 195804263 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798895 36 + 4876863 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688467 36 + 115148730 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970360 36 + 190429646 TATTTTTATTTGATACTTACTGCAAAGTGGCATGTG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299848 36 - 25927173 TATTTTTATTTGATACTTACTGCAAAGTGGCATGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334314 36 + 4669795 TATTTTTATTTGATACTTACTGCAAAGTGGCATGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292612 36 + 135778131 TATTTTTATTTGATCCTTACTGCAAAGTGGCATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730742 36 - 2847728 TATTTTTATTTGATCCTTACTGCAAAGTGGCATGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860097 36 + 2368649 TATTTTTATTTGATACTTACTGCAAAGTGGCATGTG i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 977898 36 - 2196201 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i cebCap1.NW_016107886v1 I 124 C 0 s aotNan1.NW_018492112v1 3372678 36 - 5030052 TATTTTTATTTTATACTTACTGCAAAGTGGCATGTG i aotNan1.NW_018492112v1 I 328 C 0 s micMur3.chr14 17492596 36 - 93316391 TATTTTTATTGTATACTTATAGCAAGGTGACATGTG i micMur3.chr14 C 0 I 348 s proCoq1.NW_012145301v1 3915818 36 + 3993831 TATTTTTATTGTATACTTAGAGCAAGGTGACATGTG i proCoq1.NW_012145301v1 C 0 I 343 s canFam3.chr16 16935981 36 - 59632846 TATTTTCATTGCATATTTACTGCAGAGTGGCATGTG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=383359.000000 s hg38.chr4_KI270789v1_alt 87035 63 + 205944 GATACTTTTCTACTGCTGGAC------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACGTG---- s panTro5.chr4 192878696 63 + 194502333 GATGCTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACGTG---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762528 63 + 195804263 GATGCTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACGTG---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798931 63 + 4876863 GATACTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACATGTA---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688503 63 + 115148730 GATGCTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACGTG---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970396 60 + 190429646 GATGCTTTT---CTGCTGGAT------ACAAAGGTATCTATTAAGATAGAACTATTC----CTCATACACGTG---- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299884 60 - 25927173 GATGCTTTT---CTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACATG---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334350 60 + 4669795 GATGCTTTT---CTGCTGGAT------ACAAAGGTATCTATTAAGATAGAACTATTC----CTCATACACATG---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292648 63 + 135778131 GATGCTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAACTACTT----CTCATACACGTG---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730778 60 - 2847728 GATGCTTTT---CTGCTGGAT------ACAAAGGTATCTATTAAGATAGAACTATTC----CTCATACACGTG---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860133 63 + 2368649 GATGCTTTTCTACTGCTGGAT------ACAAAGGTATCTATTAAGATAGAAATATTC----CTCATACACGTG---- i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 977934 63 - 2196201 GATGTTTCTCTACTGCTGAAT------ACAAAGGAATCTATTAAAATAGAAATATTC----CTCATACGCGTG---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3372714 63 - 5030052 GATGTTTCTCTACTGCTGAAT------ACAAAGGAATCTATTAAAATAGAAATATTT----CTCATATGTGTG---- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16936017 72 - 59632846 AATGTTTCCGTAATGCTGGACAACTTAACAAAAAAACTCGTTA--CTAGTAGTGCTCAAATCCCAAAC---TGCAAA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3915854 343 + 3993831 I e micMur3.chr14 17492632 348 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86565369 2386 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=355500.000000 s hg38.chr4_KI270789v1_alt 87098 53 + 205944 CT----GTAGGATTCT--TGGAACTGAAGAAAATTTGGCCTCTAAA-AAACTGTATTATC--- s panTro5.chr4 192878759 53 + 194502333 CT----GTAGGATTCT--TGGAACTGAAGAAAATTTGGCCTCTGAA-AAACTGTATTATC--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762591 53 + 195804263 CT----GTAGGATTCT--TGGAACTGAAGAAAATTTGGCCTCTGAA-AAACTGTATTATC--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3798994 53 + 4876863 CT----GTAGGATTCT--TGGAACTGAAGAAAATTTGGCCTCTGAA-AAACTGTATTATC--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688566 50 + 115148730 CT----GTAGGATTCT--TGGAACTGAAGAAAATTTGGCCTCTGAA-AAACTATATT------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970456 53 + 190429646 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTATATTATC--- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24299944 53 - 25927173 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTATATTATC--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334410 53 + 4669795 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTATATTATT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292711 53 + 135778131 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTGTATTATC--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730838 53 - 2847728 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTATATTATT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860196 53 + 2368649 CT----GTAGGATTCT--TGGACCTGAAGAAAATTTGGCTTCTGAA-AAACTATATTATC--- i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 977997 53 - 2196201 CT----GTAGGACTCT--TGGAACTGAAGACAATTTGGCTTCTGAA-AAACTATATTATC--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3372777 53 - 5030052 CT----GTAGGAGTCT--TGGAACTGAAGACAATTTGGCCTCTGAA-AAACTATATTATC--- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86567755 53 - 129401213 CT----GTGGGACTCTTCTGGACTC--AAACAGCTTATCTTCAAGA-AGTCTGAATTATC--- i mm10.chr8 I 2386 C 0 s canFam3.chr16 16936089 61 - 59632846 CTATGAGTAATATTTA--TTAAATAGAGTGAAATTTGGTCAATGGAGAAAGTAGAAAACTGAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3915854 343 + 3993831 I e micMur3.chr14 17492632 348 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e macFas5.chr5 187912476 792 + 189454096 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=1222956.000000 s hg38.chr4_KI270789v1_alt 87151 173 + 205944 ATAATCATAAG-----AAT-------TATATTTGAT---AGAGTTTCTA----ATATTTTATT-AACATCAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAATAATTATAATGCATCAATGTGTATGTTTCTACAAATTTGACAACTATA-----ACACATG s panTro5.chr4 192878812 173 + 194502333 ATAATCATAAG-----AAT-------TATATTTGAT---AGAGTTTCTA----ATATTTTATT-AACATCAGG----AGA--TTCAATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAATAATTATAATGCATCAATCTGTATGTTTCTACAAATTTGACAACTATA-----ACACATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762644 173 + 195804263 ATAATCATAAG-----AAT-------TATATTTGAT---AGAGTTTCTA----ATATTTTATT-AACATCAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAATAATTATAATGCATCAATCTGTATGTTTCTACAAATTTGACAACTATA-----ACACATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799047 173 + 4876863 ATAATCATAAG-----AAT-------TATATTTGAT---AGAGTTTCTA----ATATTTTATT-AACATCAGG----AGA--TTCTATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAATAATTATAATGCATCAATCTGTATGTTTCTACAAATTTGACAACTATA-----ACACATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688616 173 + 115148730 ACAATCATAAG-----AAT-------TATATTTGAT---AGAGTTTCTA----ATATTTTATT-AACATCAGG----AGA--TTCAATT--GA---------------------------AGTCAATA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAAGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970509 167 + 190429646 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACATGAGG----AGA--TTTGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGCATTAAGCACTTTGTTTAA-AGGC---AGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913268 167 + 189454096 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACATGAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGCATTAAGCACTTTGTTTAA-AGGC---AGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i macFas5.chr5 M 792 C 0 s macNem1.NW_012013133v1 24299997 167 - 25927173 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACATGAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGCATTAAGCACTTTGTTTAA-AGGC---AGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334463 164 + 4669795 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACAT---G----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGCATTAAGCACTTTGTTTAA-AGGC---AGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292764 162 + 135778131 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACATCAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAA--------TGGTATTAAGCACTTTGTTTAA-AGGCAGAAGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2730891 167 - 2847728 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATT-AACATGAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGCATTAAGCACTTTGTTTAA-AGGC---AGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860249 171 + 2368649 ---ATAATCAG-----AAT-------TATATTTGAT---AGAGTTCCTA----ATATTTTATTAAACATCAGG----AGA--TTCGATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTATTAAGCACTTTGTTTAA-AGGCAGAAGAATTATAATGCATCAATCTGTATGTTTATACAAATTTGACAACTATA-----ACACATG i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978050 174 - 2196201 ATAATCATAAG-----AAT-------TATATTTGAC-----AGTTTCTA----ATA-TTTATT-AACATCCGGAGAAAGA--TTTTATT--GA---------------------------AGTCAACA--TTCGCAATTTAAATGTGGTTTTAAGCACTTTGTTTAA-ATGCAGAAGAGTTACAATGCATTAAACCGTATGTTTACACAAAGTTGGCAACTATA-----ACACATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3372830 174 - 5030052 ATAATCATAAG-----AAT-------TATATTTGAT-----AATTTCTA----ATA-TTTATT-AACATCAGGAGAAAGA--TTTTATT--GA---------------------------AGTCAACA--TTTGCAATTTAAATGTGGTTTTAAGCACTTTGTTTAA-ATGCAGAAGAATTACAATGCCTTAATCCATATGTTTACACAAAGTTGACAACTATA-----ACACATG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86567808 172 - 129401213 ----TTATTTGTTTTTAAT-------TAGTGTTGAT------GTTTTTA---GATATTTTGTT-AGTATCCAG----AGA--TTTCATCaaaa---------------------------aatcaata--tttacaatttagaaataattttatgaattatatttaatataC---AACATTGGAATGTCCTTATTAGTGTGTTTATTCAAAATTGACAACTATA-----CTTCATG i mm10.chr8 C 0 I 712 s canFam3.chr16 16936150 204 - 59632846 ---ATAGCTAT-----GATGTGCTTGCATATGCCATTTCAATTTTTCTACAGCACAGATAATT-AACTCAGAG----AAACTCTCAGGT--GAAACAGAGAGGGGAAAGAAAAGGTAAATAGTCAACAGCTTTGCAACTTATCAG-------AGTCAGTTAATCTGC-AGTAAACACCACTACCACAC---------TACTACTATTCTACTCACACATCTATATGTGTGcacatg i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3915854 343 + 3993831 I e micMur3.chr14 17492632 348 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=219396.000000 s hg38.chr4_KI270789v1_alt 87324 35 + 205944 CCACT------TAAAACCTTATTTAC-----CATGCGCAGTCTCAT s panTro5.chr4 192878985 39 + 194502333 CCACTT--AAATAAAACCGTATTTAC-----CATGCACAGTCTCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762817 39 + 195804263 CCACTT--AAATAAAACCGTATTTAC-----CATGCACAGTCTCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799220 39 + 4876863 CCACTT--AAATAAAACCGTATTTAC-----CATGCATGGTCTCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688789 39 + 115148730 CCACTT--AAATAAAACCGTATTTAC-----CATGCACAGTCTCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970676 38 + 190429646 CCGCTT--AAA-AAAACTGTATTTAC-----CATGCACAGTCTCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913435 34 + 189454096 CCGCTT--AAA-AAAACCGTATTTAC---------CACAGTCTCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300164 38 - 25927173 CCGCTT--AAA-AAAACCGTATTTAC-----CATGCACAGTCTCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334627 38 + 4669795 CCGCTT--AAA-AAAACCGTATTTAC-----CATGCACAGTCTCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292926 38 + 135778131 CCACTT--AAA-AAAACTGTATTTAC-----CATGCACAGTCTCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731058 38 - 2847728 CCGCTT--AAA-TAAACCGTATTTAC-----CATGCACAGTCTCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860420 38 + 2368649 CCACTT--AAA-AAAACCGTATTTAC-----CATGCACAGTCTCAT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978224 39 - 2196201 CCACTT--AAAAAAAACCAGATTTGC-----CATCCACAGTGTCAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373004 41 - 5030052 CCACTTAAAAAAAAAACCGGATTTGC-----CGTCCACAGTCTCAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16936354 27 - 59632846 -------------------catgcacgcacacgtgcacacacacac i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3915854 343 + 3993831 I e micMur3.chr14 17492632 348 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e mm10.chr8 86567980 712 - 129401213 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=191773.000000 s hg38.chr4_KI270789v1_alt 87359 22 + 205944 ATAAATACAAGCTGTAAGTCTA s panTro5.chr4 192879024 22 + 194502333 ATAAATACAAGCTGTAAGTCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762856 22 + 195804263 ATAAATACAAGCTGTAAGTCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799259 22 + 4876863 ATAAATACAAGCTGTAAGTCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688828 22 + 115148730 ATAAATACAAGCTGTAAGTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970714 22 + 190429646 ATAAATACAAGCTGTAAATCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913469 22 + 189454096 ATAAATACAAGCTGTAAATCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300202 22 - 25927173 ATAAATACAAGCTGTAAATCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334665 22 + 4669795 ATAAATACAAGCTGTAAATCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292964 22 + 135778131 ATAAATACAAGCTGTAAGTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731096 22 - 2847728 ATAAATACAAGCTGTAAATCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860458 22 + 2368649 ATAAATACAAGCTGTAAGTCTA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978263 22 - 2196201 ATAAATACAAGCTGTAAGTCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373045 22 - 5030052 ATGAATACAAGCTGTAAGTCTA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86568692 22 - 129401213 ATAAATGTAATCAACAGGTCCA i mm10.chr8 I 712 C 0 s canFam3.chr16 16936381 13 - 59632846 acacacacaA---------CTA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3915854 343 + 3993831 I e micMur3.chr14 17492632 348 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=325390.000000 s hg38.chr4_KI270789v1_alt 87381 32 + 205944 AGAGCCACCCTAGATTCCATTCTCTTCTTTAC s panTro5.chr4 192879046 32 + 194502333 AGAGCCACCCTAGATTCCATTCTCTTCTTTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762878 32 + 195804263 AGAGCCACCCTAGATTCCATTCTCTTCTTTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799281 32 + 4876863 AGAGCCACCCTAGATTCCATTCTCTTCTTTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688850 32 + 115148730 AGAGCCACCCTAAATTCCATTCTGTCCTTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970736 32 + 190429646 AGAGCCACCCTAGATTCCATTCTCTCCTTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913491 32 + 189454096 AGAGCCACCCTAGATTCCATTCTCTCCTTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300224 32 - 25927173 AGAGCCACCCTAGATTCCATTCTCTCCTTTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334687 32 + 4669795 AGAGCTACCCTAGATTCCATTCTCTCCTTTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134292986 32 + 135778131 AGAGCCACCCTAGATTCCATTCTCTCCTTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731118 32 - 2847728 AGAGCTACCCTAGATTCCATTCTCTCCTTTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860480 32 + 2368649 AGAGCCACCCTAGATTCCATGCTCTCCTTTAC i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978285 31 - 2196201 AGAGCCACCCCAGATTGCATTCTCTCCCTTA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373067 31 - 5030052 ACAGCCACTCCAGATTCCATTCTCTCCCTTA- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17492980 32 - 93316391 AGAGCCACCCTAGGTTCCACTCTCTCCTTTAC i micMur3.chr14 I 348 I 62 s proCoq1.NW_012145301v1 3916197 32 + 3993831 AGAGCCACCCTAGATTCCACTCTCTCCTTTAC i proCoq1.NW_012145301v1 I 343 C 0 s mm10.chr8 86568714 31 - 129401213 AAAGCCAACTTGAACTCCATTCTC-CATTTAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16936394 30 - 59632846 ATGGTCATGGTGAACTTAGTTCATGTTTTT-- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=367343.000000 s hg38.chr4_KI270789v1_alt 87413 47 + 205944 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGCTTATTTT---------TCTTCCTGA s panTro5.chr4 192879078 47 + 194502333 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGCTTATTTT---------TCTTCCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762910 47 + 195804263 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGCTTATTTT---------TCTTCCTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799313 46 + 4876863 CTCCAGTGACT-----------AGTCCGT-CCCAAGGTGAGCTTATTTT---------TCTTCCTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688882 47 + 115148730 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGCTTATTTT---------TCTTCCTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970768 47 + 190429646 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913523 47 + 189454096 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300256 47 - 25927173 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334719 47 + 4669795 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTtcctga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293018 47 + 135778131 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731150 47 - 2847728 CTCCAGTGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860512 47 + 2368649 CTCCAATGACT-----------AGTCCGTCCCCAAGGTGAGTTTATTTT---------TCTTCCTGA i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978316 58 - 2196201 CTCCAGTGACTTATTTGTCTTCAGTCAGTCCCCAAGGTGAGCTTATTTG---------TCTTCCTGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373098 47 - 5030052 CTTCAGTGACT-----------AGTCAGTCCCCAAGGTGAGCTTATTCG---------TCTTCCTGA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3916229 56 + 3993831 TTCCGGTTGCT-----------AGTCAGTCCCCAAGGGCAGTTTTTCTTCTTCCTACGTCTTTCTGA i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86568745 29 - 129401213 CTCATGAGATT-----------------------------GCATCATTG---------TTTCTCTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16936424 15 - 59632846 ------------------------------------------CTACATC---------TTTTACTA- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17493012 62 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=421578.000000 s hg38.chr4_KI270789v1_alt 87460 45 + 205944 ATGACCCTAAGGGG-TAAAAGTAGATTTGATAGTTGGGGACGATAT s panTro5.chr4 192879125 45 + 194502333 ATGACCCTAAGGGG-TAAAAATAGATTTGATAGTTGGGGACGATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192762957 45 + 195804263 ATGACCCTAAGGGG-TAAAAATAGATTTGATAGTTGGGGACGATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799359 45 + 4876863 ATGACCCTAAGGGG-TAAAAATAGATTTGATAGTTGGGGACGATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688929 45 + 115148730 GTGACCCTAAGGGG-TAAAAATAGATTTGATAGTTGGAGACGATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970815 45 + 190429646 ATGACCCTAAGGGG-TAAAAATAGATTGGATAGTTGGAGACGACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913570 45 + 189454096 ATGACCCTAAGGGG-TAAAAATAGATTGGATAGTTAGAGATGACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300303 45 - 25927173 ATGACCCTAAGGGG-TAAAAATAGATTGGATAGTTAGAGACGACAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334766 45 + 4669795 atgaccctaagggg-taaaaatagattggatagttggagacgacat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293065 45 + 135778131 ATGACCCTAAGGGG-TAAAAATAGGTTGGATAGTTGGAGACGATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731197 45 - 2847728 ATGACCCTAAGGGG-TAAAAATAGATTGGATAGTTGGAGACGACAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860559 25 + 2368649 ATGACCCTAAGGGG-TAAA--------------------ACGATAT i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 978374 46 - 2196201 ATGACCCTAACGGGTTAAAAGTCGATTTGATTGTTGGAGACAACGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373145 46 - 5030052 ATGACCCTAAGCGGTTGAAAATCGATTTGATTGTTGGAGACAACAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493074 45 - 93316391 ATGACCCTAAGGAG-TAGAAATAGACTTGATTGTTGGGAACTATAT i micMur3.chr14 I 62 C 0 s proCoq1.NW_012145301v1 3916285 45 + 3993831 ATGACCTTAAGGAG-CAGAAATAGACTTGATTGTTGGGAACTATAT i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86568774 45 - 129401213 ATGCCTCTAAGAAC-CAGAAATAGAGTTGAAAATAAGGAATGTAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16936439 45 - 59632846 ATGATCCTAAGGAG-GAGAAATAGATTTGATTATTGGGAGCTATGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e saiBol1.JH378165 13082252 1127 - 14256875 M e otoGar3.GL873580 11218075 4389 - 11315646 I a score=1338578.000000 s hg38.chr4_KI270789v1_alt 87505 121 + 205944 GATTTGTGGTTATACAGAAA-------------------AACTTTTAACTACTGACACTATACAAAGCTCTAACTTGTCCTTTGGAGGAAAATATTTTTC---TTACTA---ACATTTACTGATTAGACATTTAGTGGGAATATC--A s panTro5.chr4 192879170 121 + 194502333 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTACTGACACTATACAAAGCTCTAACTTGTCCTTTGGAGGAAAGTATTTTTC---TTACTA---ACATTTACTGACTAGACATTTAGTGGGAATATC--A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763002 121 + 195804263 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTACTGACACTATACAAAGCTCTAACTTGTCCTTTGGAGGAAAGTATTTTTC---TTACTA---ACATTTACTGACTAGACATTTAGTGGGAATATC--A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799404 121 + 4876863 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTACTGACACTATACAAAGCTCTAACTTGTCCTTTGGAGGAAAATATTTTTC---TTACTA---ACATTTACTGACTAGACATTTAGTGGGAATATC--A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112688974 121 + 115148730 GATTTGCGGTTGTACAGAAA-------------------AACTTTCAACTACTGACACTATACAAAGCTCTAACTTGCCCTTTGGAGGAAAATATTTTTC---TTGCTA---ACATTTACTGACTAGACATTTAGTGGGAATATC--A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970860 121 + 190429646 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTCCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGTGGGAATATC--A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913615 121 + 189454096 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTCCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGTGGGAATATC--A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300348 121 - 25927173 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTCCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGTGGGAATATC--A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334811 121 + 4669795 gatttgcggttatacagaaa-------------------aacttttaactattgacactatacaaaggtctaacttgtcctttggaggaagatctttttc---ttactg---gaATTTACTAACTAGATATTTAGAGGGAATATC--A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293110 121 + 135778131 GATTTACGGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTTCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGTGGGAATATC--A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731242 121 - 2847728 GATTTGCGGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTCCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGAGGGAATATC--A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860584 121 + 2368649 GATTTACAGTTATACAGAAA-------------------AACTTTTAACTATTGACACTATACAAAGGTCTAACTTGTCCTTTGGAGGAAGATATTTTTC---TTACTA---GAATTTACTAACTAGATATTTAGTGGGAATATC--A i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083379 126 - 14256875 GATTCACGGTTAGAAAGAAA-------------------AACTTGTAACTACTGACACTATGCAAAGGTCTAACTTGTCCTTTGGAGGAAAATATTTTTCTTTTTACTG---GCTTTTACTGACTAGACGTTTAGTGGGAATGTCACA i saiBol1.JH378165 M 1127 C 0 s cebCap1.NW_016107886v1 978420 126 - 2196201 GATTCACAGTTATAAAGAAA-------------------ACCTTGTAACTACTGACACTAAGCAAAGGTCTAGCTTGTCCTTTGGAGGAAAATATTTTCCTTCTTACAG---GCATTTACTGACTAGACGTTTAGTGGGAATGGCATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373191 126 - 5030052 GATTCACAGTTATAAAGAAA-------------------AACTTGTAACTACTGACACTATGCAAAGGTCTAACTTGTCCTTTCGAGGAAAATATTTTTCTTCTTACTG---GCATTTACTGATGAGATGTTTAGTGGGAATATCATA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493119 123 - 93316391 GATTAGCTGCTATA-AGAAA-------------------AGCTCTTAACCACTGACACTATACAAAAGCTTAACTTGTCCTTAGAAGGAAAATATTTTCCCTCTTACTA---GCATTTGCTGACTAGACACTTAGTGGGAATATC--A i micMur3.chr14 C 0 I 215 s proCoq1.NW_012145301v1 3916330 126 + 3993831 GATTAGCTGCCATA-AGAAA-------------------AGCTCTTAACCATTGACACTGTACAAAAGCTTAACTTGTCCTTTGAAGAAAAATATTTTTCCTCTTACTAAACACTTTTGCTGACTAGACACTTAGTGGGAATATC--A i proCoq1.NW_012145301v1 C 0 I 2 s mm10.chr8 86568819 116 - 129401213 -------AACTATAGAATGG-------------------AAAACTTACCTACTGTCACTTTGTAAAATCACAGCTTATGTTTTAGTAGAGATTTGTTTTGCT-TTATTA---ACATTTGTTTATAAACAAGTTGGTAAAATAGTC--A i mm10.chr8 C 0 I 2 s canFam3.chr16 16936484 143 - 59632846 AATTAGCTGCTATACAAAAAAAACAAAAACAATCTCCAGAACTTCTAATCATGTACACTTTACAGAGGTCTAACTTGTCCTTTAGAAGAAAATGTTTTTCTTTTCGTTG---GTATTTGCTTACTAGACACTTGGTGGGAGTATC--A i canFam3.chr16 C 0 I 2 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=1054808.000000 s hg38.chr4_KI270789v1_alt 87626 120 + 205944 GGCAACGTGCTGGTTTCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGGGCATTTCCAATTCTGC-G-TCAA------------------------------------CATCATTGTTTACACAGCTGCAGAGAGCACATTCTTCCAGGAGCACCTT s panTro5.chr4 192879291 120 + 194502333 GGGAACGTGCTGGTTTCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGGGCATTTCCAATTCTGC-G-TCAA------------------------------------CATCATTGTTTACACAGCTGCGGAGAGCACATTCTTCCAGGAGCACCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763123 120 + 195804263 GGGAACGTGCTGGTTTCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGGGCATTTCCAATTCTGC-G-TCAA------------------------------------CATCATTGTTTACACAGCTGCGGAGAGCACATTCTTCCAGGAGCACCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799525 120 + 4876863 GGGAACGTGCTGGTTTCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGGGCATTTCCAATTCTGC-A-TCAA------------------------------------CATCATTGTTTACACAGCTGCGGAGAGCACATTCTTCCAGGAGCACCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689095 117 + 115148730 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGGGCATTTCCAATTCTGC-G-TCAA------------------------------------CATC---GTTTACACAGCTGCAGAGAGCACATTCTTCCAGGAGCACCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188970981 156 + 190429646 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAACATCGTTGTTCACCCAGCCACGGAGAGCACGTTCTTCATCGTTGTTTACCCAGCCGCGGAGAGCACGTTCTTCCAGGAGTACCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913736 156 + 189454096 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAACATCGTTGTTCACCCAGCCACGGAGAGCACGTTCTTCATCGTTGTTTACCCAGCCGCGGAGAGCACGTTCTTCCAGGAGTACCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300469 156 - 25927173 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAACATCGTTGTTCACCCAGCCGCGGAGAGCACGTTCTTCATCGTTGTTTACCCAGACGCGGAGAGCATGTTCTTCCAGGAGTACCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3334932 156 + 4669795 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAACATCGTTGTTCACCCAGCCACGGAGAGCACGTTCTTCATCGTTGTTTACCCAGCCGCGGAGAGAACGTTCTTCCAGGAGTACCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293231 156 + 135778131 GGGAATGTACTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAACATCGTTGTTCACCCAGCTGCGGAGAGTACGATCTTCATCGTTGTTCACCCAGCTGCGGAGAGCACGTTCTTCCAGACGTACCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731363 120 - 2847728 GGGAATGTGCTGGTATCAAATGGTTGGTT-GCAG-GTCCCTTTCAAAAATGAGCATTTCCAATTCTGC-A-TCAA------------------------------------CATCGTCGTTCACCCAGCCGCGGAGAGCACGTTCTTCCAGACGTACCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860705 120 + 2368649 GGGAATGTGCTGGTATCCAATGGTTGGTT-GCAA-GTCCCTTTTGAAAATGAGCATTTCCAATTCTGC-A-CCAA------------------------------------CATCGTTGTTTACCCAGCTGCGGAGAGCACATTCTTCCAGGAGCACCTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083505 119 - 14256875 GGAAATGTGCAGGTATGAAATAGTTGGCT-GAAG-ATCCCTTCCAAAAATG-GCATTCCTGACCCGGC-A-GTCG------------------------------------CACCACTGTTGACGCAGCTGCGGAGTGCACATTCTTCCAGGAGCACTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978546 119 - 2196201 GGAAATGTGCTGGTCTGAAACAGTTGGCT-GAAG-ACCCCTTCCAAAAACG-GCGTTCCTAATCCTGC-A-GTCA------------------------------------CGTCACTGTTGACACAGCTGCAGAGCGCGCATTCTTCCAGGAGCACTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373317 119 - 5030052 GGAAATGTGCTGGTATGAAATAGTTGGCT-GAAG-ATCCCTTTCAAAAACG-GCGTTCCTAATCCTGC-A-GTCG------------------------------------CATCACTGTTGACACAGCTGCAGAGCGTGCATTCTTCCAGGAGCACTTC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3916458 121 + 3993831 GGAAATGTGCTGACATCAAACGGTTGGTT-AAAA-GATCTTTCCCAAAATAGGCGTTTCCAATTCTGC-AGTCGA------------------------------------CATCATTGCTTACACAGCTGCGGAGAGCACGTTCCTCACGGAGCACCTT i proCoq1.NW_012145301v1 I 2 I 67 s mm10.chr8 86568937 92 - 129401213 GAAAATGTGTTGTCTTTAAATGATGGGTCAAAAG-GGTCCTCACAAACCTATGCATCTGCGGAT-----A-TCAG------------------------------------CAT----GTTTCCTCCACTGCCAAGAGC--------------------- i mm10.chr8 I 2 C 0 s canFam3.chr16 16936629 120 - 59632846 GAAAGTATGCTAATCTCAAATGACTGGTT-GAAGAGTCCCTTCCAAACATGGGCATTTCTAGATCTGTGA-TCAA------------------------------------CTTCACTGCTTACCCAGCTGTGAAGAACAGA--CTTTCAAGAGCACCTC i canFam3.chr16 I 2 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17493242 215 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=555186.000000 s hg38.chr4_KI270789v1_alt 87746 77 + 205944 CAGGGCTTTCCGGGAAGCTTCTGGGCTTCGTTTGTTTGGAATCCTAAAGCAAGCAGCCTTTCCTGAAAAGAATGTCC s panTro5.chr4 192879411 77 + 194502333 CAGGGCTTTCCGGGAAGCTTCTGGGCTTCGTTTGTTTGGAATCCTAAAGCAAGCAGACTTTCCTGAAAAGAACGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763243 77 + 195804263 CAGGGCTTTCCGGGAAGCTTCTGGGCTTCGTTTGTTTGGAATCCTAAAGCAAGCAGACTTTCCTGAAAAGAACGTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799645 77 + 4876863 CAGGGCTTTCCAGGAAGCTTCTGGGCTTTGTTTGTTTGGAATCCTAAAGCAAGCAGCCTTTCCTGAAAAGAACGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689212 77 + 115148730 CAGGGCTTTCCGAGAAGCTTCTGGGCTTTGTTTGTTTGGAATCCTAAAGCAAGCAGCCTTTCCCGAAAAGAACGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971137 77 + 190429646 CAGGGATTTCCGGGCAGCTTCCGGGCTTCCTTTGTTTGGAATCCTAAAGCAAGCAGCTTTTCCCAAGAAGAATGTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913892 77 + 189454096 CAGGGATTTCCGGGCAGCTTCCGGGCTTCCTTTGTTTGGAATCCTAAAGCAAGCAGCTTTTCCCAAGAAGAATGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300625 77 - 25927173 CAGGGATTTCCGGGCAGCTTCCGGGCTTCCTTTGTTTGGAATCCTAAAGCAAGCAGCTTTTCCCAAGAAGAATGTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335088 77 + 4669795 CAGGGATTTCCGGGCAGCTTTCCGGCTTCCTTTGTTTGGAATCCTAAAGCAAGCAGCTTTTCCCAAGAAAAATGTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293387 77 + 135778131 CAGGCATTTCCGGGCAGCTTCCGGGCTTCCTTTGTTTGGAATCCTAAAGTAAGCAGCTTTTCCCAAAAAGAAAGTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731483 77 - 2847728 CAGGGATTTCCCGGCAGCTTCTGGGCTCCCTTTGTTTGGAATCCTAAAGCAAGCAGCTTTTCCCAAGAAGAAAGTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860825 77 + 2368649 CAGGGCTTTCCGGGCAGCTTCTGGGCTTCGTTTGTTTGGAATCCGAAAGCAAGCAGCTTTTCCCAAAAAGAAAGTCC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083624 76 - 14256875 CAGGGCGTTCA-GGAAGGTTCTGTCCTCCGTTTGTTTTGATTCCTAAAGCCAGCAGTCTTTCATGAAGAGAAAGTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978665 76 - 2196201 CAGGGCTTTCC-GGAAGGTTCTGTCCTCCGTTTGTTTTGATTCCTAAAGCCAGCAGTCTTTCACGAAGAGAAAGTCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373436 76 - 5030052 CAGGGCTTTCA-GGAAGGTTCTGTCCTCCGTTTGTTTTGGTTCCTAAAGCCAGCAGTCTTTCATGAAGGGAAAGTCC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86569029 48 - 129401213 -------------------TCTGTACTCTGTCCACTGTGGTCCCTCAAACAGTTCATCTTTCAGGAA---------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16936749 70 - 59632846 GAGTGCTCTCAGAGCATGTTTG----TTCATTTTTT---GATCCTTATACTGGCACAGTCCTTCATGAAGAAGGTCC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916579 67 + 3993831 I e micMur3.chr14 17493242 215 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=240528.000000 s hg38.chr4_KI270789v1_alt 87823 23 + 205944 TCAGGAAATACTTTGGAATAAAT s panTro5.chr4 192879488 23 + 194502333 TCAGGAAATACTTTGGAATAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763320 23 + 195804263 TCAGGAAATACTTTGGAATAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799722 23 + 4876863 TCAGGAAATACTTTGGAATAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689289 23 + 115148730 TCAGGAAATACTTTGGAATAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971214 23 + 190429646 TCAGGAAATACTTTGGAGTAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913969 23 + 189454096 TCAGGAAATACTTTGGAGTAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300702 23 - 25927173 TCAGGAAATACTTTGGAGTAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335165 23 + 4669795 TCAGGAAATACTTTGGAATAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293464 23 + 135778131 TCAGGAAATACTTTGGAATAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731560 23 - 2847728 TCAGGAAATACTTTGGAATAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860902 23 + 2368649 TCAGGAAATACTTTGGAATAAAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083700 23 - 14256875 CCAGGAAACACTTTCGAATAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978741 23 - 2196201 CCAGGAAACACTTTCGAATAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373512 23 - 5030052 CCAGGAAACACTTTCGAATAAAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3916646 22 + 3993831 TCAGGAAATATTTT-GAATAAAT i proCoq1.NW_012145301v1 I 67 C 0 s mm10.chr8 86569077 11 - 129401213 ----GAAGAGCCTTG-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16936819 23 - 59632846 TCAGGAAATAGTTCTGAATAAAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17493242 215 - 93316391 I e dasNov3.JH570353 1420334 2169 - 2520184 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=138112.000000 s hg38.chr4_KI270789v1_alt 87846 11 + 205944 TAAATGATATT s panTro5.chr4 192879511 11 + 194502333 TAAATGATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763343 11 + 195804263 TAAATGATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799745 11 + 4876863 CAAATGATATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689312 11 + 115148730 TAAATGATATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971237 11 + 190429646 TAAATGGCATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187913992 11 + 189454096 TAAATGGCATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300725 11 - 25927173 TAAATGGCATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335188 11 + 4669795 TAAATGGCATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293487 11 + 135778131 TAAATGGCATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731583 11 - 2847728 TAAATGGCATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860925 11 + 2368649 TAAATGGCATT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083723 11 - 14256875 TAAATGGTATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978764 11 - 2196201 TAAATGGTATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373535 11 - 5030052 TAAATGGTATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493457 11 - 93316391 TAAATGATATT i micMur3.chr14 I 215 C 0 s proCoq1.NW_012145301v1 3916668 11 + 3993831 TAAATGACATT i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86569088 11 - 129401213 TGAATGAAATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16936842 11 - 59632846 TGAATAGAATT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e dasNov3.JH570353 1420334 2169 - 2520184 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=154321.000000 s hg38.chr4_KI270789v1_alt 87857 12 + 205944 TTTAGGCATTTT s panTro5.chr4 192879522 12 + 194502333 TTTAGGCATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763354 12 + 195804263 TTTAGGCATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799756 12 + 4876863 TTTAGGCATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689323 12 + 115148730 TTTAGGCATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971248 12 + 190429646 TTTAGGCATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914003 12 + 189454096 TTTAGGCATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300736 12 - 25927173 TTTAGGCATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335199 12 + 4669795 TTTAGGCATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293498 12 + 135778131 TTTAGGCATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731594 12 - 2847728 TTAAGGCATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860936 12 + 2368649 TTTAGGCATTTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083734 12 - 14256875 TTTAGGCATTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978775 12 - 2196201 TTTAGGTATTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373546 12 - 5030052 TTTAGGCATTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493468 11 - 93316391 TTTAGGCATTT- i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3916679 12 + 3993831 TTTAGGCATTTT i proCoq1.NW_012145301v1 C 0 I 111 s mm10.chr8 86569099 2 - 129401213 TC---------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16936853 12 - 59632846 TTTAGGCCTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422503 12 - 2520184 ttagggCATTTT i dasNov3.JH570353 I 2169 C 0 e calJac3.chr3 189594403 224 - 190850796 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=378724.000000 s hg38.chr4_KI270789v1_alt 87869 35 + 205944 TATCGATCTGTTGTTTAGAGACGATTTTGAATCTG s panTro5.chr4 192879534 35 + 194502333 TATCGATTTGTTGTTTAGAGACGATTTTGAATCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763366 35 + 195804263 TATCGATTTGTTGTTTAGAGACGATTTTGAATCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799768 35 + 4876863 TATCGATCTGTTGTTTAGAGACGATTTTGAATCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689335 35 + 115148730 TATCGATCTGTTGTTTAGAGACAATTTTGAATCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971260 35 + 190429646 TATTGATCTGTTGTTTACAGACTATTTTGAGTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914015 35 + 189454096 TATTGATCTGTTGTTTACAGACTATTTTGAGTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300748 35 - 25927173 TATTGATCTGTTGTTTACAGACTATTTTGAGTCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335211 35 + 4669795 TATTGATCTGTTGTTTACAGACTATTTTGAGTCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293510 35 + 135778131 TATTGATCTGTTGTTTACAGACTATTTTGAATCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731606 35 - 2847728 TATTGATCTGTTGTTTACAGACTATTTTGAGTCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860948 35 + 2368649 TATTGATCTGTTGTTTACAGACTATTTTGAATCTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083746 35 - 14256875 TATCGATCTGTTGTTTAGAGACTGTTTGGAATCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978787 35 - 2196201 TATCCATCTGTTGTTTAGAGACAATTTTGAATCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373558 35 - 5030052 TATCTATCTGCTGTTTAGAGACTATTTTGAATCTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493479 35 - 93316391 TATTGATTTGTTGTTTAGAGGATATTTTGAATCTG i micMur3.chr14 C 0 I 98 s mm10.chr8 86569101 34 - 129401213 -ATCCACTTGATATTTATAGGATATGTTGAGTCTG i mm10.chr8 C 0 I 7 s canFam3.chr16 16936865 35 - 59632846 TACTGATTCGTTTTTTAGAGAATATTTTGAATCTA i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1422515 33 - 2520184 CATTGATACAGTCTTTGGAAA-TGTCTTGA-TCTA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916691 111 + 3993831 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=208346.000000 s hg38.chr4_KI270789v1_alt 87904 23 + 205944 TTGACTTATTTT--------GTGATAAACAG s panTro5.chr4 192879569 23 + 194502333 TTGACTTATTTT--------GTGATAAGCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763401 23 + 195804263 TTGACTTATTTT--------GTGATAAGCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799803 23 + 4876863 TTGACTTATTTT--------GTGATAAGCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689370 23 + 115148730 TTGACTTATTTT--------GCGATAAGCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971295 23 + 190429646 TTGACTTATTTT--------GTGATAAGCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914050 23 + 189454096 TTGACTTATTTT--------GTGATAAGCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300783 23 - 25927173 TTGACTTATTTT--------GTGATAAGCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335246 23 + 4669795 TTGACTTATTTT--------GTGATAAGCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293545 23 + 135778131 TTGACTTATTTT--------GTGATAAGCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731641 23 - 2847728 TCGACTTATTTT--------GTGATAAGCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 860983 23 + 2368649 TTGACTTATTTT--------GTGATGAGCAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083781 23 - 14256875 TTCACTGACTTT--------GTGTTAGGCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978822 23 - 2196201 TTGACTGACTTT--------GTGTTAGGCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373593 23 - 5030052 TTGACTTACTTT--------GTGTTACGCAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86569142 21 - 129401213 TTGAC--AACAT--------ATGACAGGTAG i mm10.chr8 I 7 I 2 s canFam3.chr16 16936903 21 - 59632846 ACGAGTAAATTT----------GGCAGACAG i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1422548 31 - 2520184 TGGACTTATTTTGAATAAATGTGGTAAAGAG i dasNov3.JH570353 C 0 I 2 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916691 111 + 3993831 I e micMur3.chr14 17493514 98 - 93316391 I e otoGar3.GL873580 11218075 4389 - 11315646 I a score=469735.000000 s hg38.chr4_KI270789v1_alt 87927 48 + 205944 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTGACTTGCCA s panTro5.chr4 192879592 48 + 194502333 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTGACTTGCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763424 48 + 195804263 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTGACTTGCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799826 48 + 4876863 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTGACTTGCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689393 48 + 115148730 AACT-TTTACAGCTTCTCAATGGAATCTGATTTCTAGATTTACTTGCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971318 48 + 190429646 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTTACTTGCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914073 48 + 189454096 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTTACTTGCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300806 48 - 25927173 AACT-TTTACAGCATCTCAATGGAATCTGATTTCTAGATTTACTTGCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335269 48 + 4669795 AACT-TTTACAGCATCTCAGTGGAATCTGATTTCTAGATTTACTTGCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293568 48 + 135778131 AACT-TTTACAGCATCTCAGTGGAATCTGATTTCTAGATTTACTTGCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731664 48 - 2847728 AACT-TTTACAGCATCTCAGTGGAATCTGATTTCTAGATTTACTTGCCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861006 48 + 2368649 AACT-TTTACAGCATCTCAGTGGAATCTGATTTCTAGATTTACTTGCCA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083804 48 - 14256875 AACT-TTTACAGCACTTTAGAGGAATCTGATTTGTAGGTTGAGTTTCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978845 48 - 2196201 AACT-TCTACAGCACTTTAGAGGAATCTGATTTGTAGATTGAGTTTCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373616 48 - 5030052 AACT-TTTACAGCACTTTAGAGGAATCTGATTTGTAGATTGAGTTTCCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11222464 31 - 11315646 AATT-TTTACAGCATAGTAGCAGAATATGCCT----------------- i otoGar3.GL873580 I 4389 C 0 s mm10.chr8 86569165 43 - 129401213 AAAT-TTTATGGAATATAAATAAAATCTAATTTATAGACTACGA----- i mm10.chr8 I 2 C 0 s canFam3.chr16 16936924 48 - 59632846 GAAT-ATATTGACATTTTAACAGGATCTGATCTGCAGATTCAGTTGCCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422581 49 - 2520184 AATTATTTACTGTGTTTTAACAGAATCTGATTTACAAGCTGACTTATCA i dasNov3.JH570353 I 2 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916691 111 + 3993831 I e micMur3.chr14 17493514 98 - 93316391 I a score=187709.000000 s hg38.chr4_KI270789v1_alt 87975 16 + 205944 CCTTGAAATGATAATT s panTro5.chr4 192879640 16 + 194502333 CCTTGAAATGATAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763472 16 + 195804263 CCTTGAAATGATAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799874 16 + 4876863 CCTTGAAATGATAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689441 16 + 115148730 CCTTGAAATGATAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971366 16 + 190429646 CCTTGAAGCGATAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914121 16 + 189454096 CCTTGAAGCGATAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300854 16 - 25927173 CCTTGAAGCGATAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335317 16 + 4669795 CTTTGAAGCGATAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293616 16 + 135778131 CCTTGAAGCGATAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731712 16 - 2847728 CCTTGAAGCGATAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861054 16 + 2368649 CCTTGAAGCGATAATT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083852 16 - 14256875 CCTTGAAATGATAGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978893 16 - 2196201 CCTTGAAATGACAGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373664 16 - 5030052 CCTTGAAATGATAGTC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3916802 16 + 3993831 CCTTAAAATGATCATT i proCoq1.NW_012145301v1 I 111 C 0 s otoGar3.GL873580 11222495 16 - 11315646 TCTTAAGATAATGATC i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86569208 16 - 129401213 ACTTAAAGTGATGGGC i mm10.chr8 C 0 I 3 s canFam3.chr16 16936972 16 - 59632846 CCTTGAAATAATGGTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422630 16 - 2520184 CATTCAAATGACGATC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e micMur3.chr14 17493514 98 - 93316391 I a score=1280980.000000 s hg38.chr4_KI270789v1_alt 87991 106 + 205944 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACTTTCAGTTTATAACAC----AATGTACAATTGGGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG s panTro5.chr4 192879656 104 + 194502333 A----CATTG-TTTTT----GGGA--AG--TAACAT-TTTGTTT-CATAACATAAGACTTTCAGTTTATAACAC----AATGTACAATTGGGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763488 105 + 195804263 A----CATTG-TTTTT----GGGA--AG--TAACATCTTTGTTT-CATAACATAAGACTTTCAGTTTATAACAC----AATGTACAATTGGGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799890 106 + 4876863 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACTTTCAGTTTATAACAC----AATGTACAATTGGGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689457 101 + 115148730 A----TATTG-TTTTT----GAGA--AG--TAACATCTTTGTTT-C----CATAAGACTTTCAGTTTATAACAC----AATGTACAATTGGGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971382 106 + 190429646 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914137 106 + 189454096 A----CACTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300870 106 - 25927173 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335333 106 + 4669795 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293632 106 + 135778131 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTTCTTTTCTAAAAG---------------------------------CGCTGATTTATTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731728 106 - 2847728 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861070 106 + 2368649 A----CATTG-TTTTT----GAGA--AG--TAACATCTTTGTTTCCATAACATAAGACCTTCAGTTTATAACAC----AATGTACAACTGAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083868 109 - 14256875 ATTACTTTTA-TTTTT----GAGA--AG--TAACATCTTTGTTTC-----CATAAGACCTTCAGTTTATAGCACAATTAATGTATGATTCAGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 978909 109 - 2196201 ATTAATTTTA-TTTTT----GAGA--AG--TAACATCTTTGTTTC-----CGTAAGACCTTCAGTTTATAACACAACTAACGTGTGATTCAGGCTTACTTTTTTAAAAG---------------------------------CACTAATTTATTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373680 107 - 5030052 ATTACTTTTA-TTTTT----GAGA--AG--TAACATCTTTGTTTC-----CGTAAGACCTTCAGTTTATAACACAATTAATGTATGAT--AGGCTTACTTTTTTAAAAG---------------------------------CACTGATTTATTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493612 110 - 93316391 A----CATTA-TTTTG----GAGG--AG--CAACACCTTTGTTTCTATAACATGAGAACTTGAGTTTTTAACATAATTATCGTATGATTGAGGCTTACTTTTTTAAAAA---------------------------------TACTGATTTATTTG i micMur3.chr14 I 98 C 0 s proCoq1.NW_012145301v1 3916818 110 + 3993831 A----CATTA-TTTTG----GAGG--AG--AAACATCTTTGTTTTTATAACACGAGAACTTGAGTTTTTAACACAATTATTATATCATTGGGGCTTACTATTTTTAAAA---------------------------------TACTGATTTATTTG i proCoq1.NW_012145301v1 C 0 I 20680 s otoGar3.GL873580 11222512 111 - 11315646 A----CATCATTTTTG----GAGG--AA--GGACATCTCTGTTTTTTGAACATGGGAACTTGAGTTTTTAAAACAATTATTGTATGATTGAGGCTTATGTTTTTTCAAA---------------------------------TACCGATTTATTTG i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86569227 106 - 129401213 A----AACTA-TTTTT----AGAAACAC--TGACATCTTTGTTTTGATAATATAA---CTGGAGTTTATTATACAGTCAATTTATAATTGAAGCCTGCTCTT---AAAA---------------------------------AACTAAGTTATTTA i mm10.chr8 I 3 C 0 s canFam3.chr16 16936988 114 - 59632846 --GCTAAATA-TTTTT----AGGA--AGAACAATACCTTTGTTTTCACAGAACAAGACTTTGAATTTGTAACACAATTAATGTATGACTGAGGCTTATACTTTTTAAAA---------------------------------CACTGATTTATTTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422646 146 - 2520184 A----CTACA-TTTTCTGAAGAGG--AG--TAGCATCATTGTTTCCACAAAACAAGAGCTTCAATTTATAGTGCCATTAATGTATGATTGAGA-TTACTCTTTTTAAAATTCCTGTCATGTTCAATGTTCCTCTTTTTCAATCATCAGTTTATTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I a score=1253128.000000 s hg38.chr4_KI270789v1_alt 88097 100 + 205944 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTATGAATGACCTTATACAATATAATTTTATTAAATAAAATATTTTTAT s panTro5.chr4 192879760 100 + 194502333 AAACCTGTCTAAATTTGGCTAGGCTTCATAATTGGAGCAATC----ATCAATATAGTATGAATGACCTTATACAATATAATTTTATTAAATAAAATATTTTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763593 100 + 195804263 AAACCTGTCTAAATTTGGCTAGGCTTCATAATTGGAGCAATC----ATCAATATAGTATGAATGACCTTATACAATATAATTTTATTAAATAAAATATTTTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3799996 100 + 4876863 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTATGAATGACCTTATACAATATAATTTTATTAAATGAAATATTTTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689558 100 + 115148730 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATAATTTTATTAAATAAAATATTTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971488 96 + 190429646 AAACCTGTCTAAATTCGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT----AAAGTATTTTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914243 96 + 189454096 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCTATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT----AAAGTATTTTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24300976 96 - 25927173 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT----AAAGTATTTTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335439 96 + 4669795 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT----AAAGTATTTTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293738 95 + 135778131 AAACCTGTCTAAATTCGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT-----AAGTATTTTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731834 96 - 2847728 AAACCTGTCTAAATTTGGCTGGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATT----AAAGTATTTTTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861176 100 + 2368649 AAACCTGTCTAAATCTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGACCTTATACAATATGATTTTATTAAATAAAGTATTTTTAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13083977 100 - 14256875 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATAGAGTGTGAATGGCCTTATAACatataattttattaaatagaatatttttat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979018 100 - 2196201 AAACCTGTCTAAATTTGGCTAGGTTTCATAATTGGAGCAATC----ATCAATATAGTGTGAATGGCCTTATAACATATAATTTTATTAAATAGAATATTTTTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373787 100 - 5030052 AAACCTGTCTAAATTTGGCTAGGTTTCAGAATTGGAGCAATC----ATCAATATAGTATGAATGGCCTTATAACATATAATTTTATTAAATAGAATATTTTTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493722 103 - 93316391 GAACCTGTCTACATTTGGCTAGAGTTTGTAATTGGAGCAACCACCAACCAATGTAGTGAGAATGATCTTATAAAATGAAATTCTATGAAATAAAATA-TTTTAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11222623 103 - 11315646 GAATCTATCTCCATTTGACTAGAGCTTGTAATTGGAGCAATCACCAACCAATATGGCATGAATGACTTTATAAAATGTAATTCTATGaaataaaata-ttttat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86569333 99 - 129401213 AAACTTTTCTAAATTTGACTAGCATGTGAATTTAGACTTATC----ATCAATATAGTGTGAATTACACtattaaatttaatttt-taaattaatttatttatat i mm10.chr8 C 0 I 673 s canFam3.chr16 16937102 100 - 59632846 AAACCTGTGTTAATTTGGCTGTAGTTTATAGTTGGGGCAATA----ATCAATACAGTATGAAGGAGCTTGCAAAATTTAACTCCATGAAATAAAATATTTTTGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422792 104 - 2520184 AAACCTGTCTTAATTTGTGTAGGATTTGTAATTGTAGCAATCATTCATTAGTATAATATGAATTACCTTATGAAATATGTTTCTATGaaataaaatatttttat i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I a score=15561.000000 s hg38.chr4_KI270789v1_alt 88197 1 + 205944 T s panTro5.chr4 192879860 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763693 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800096 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689658 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971584 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914339 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301072 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335535 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293833 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731930 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861276 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084077 1 - 14256875 t i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979118 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373887 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493825 1 - 93316391 T i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11222726 1 - 11315646 t i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16937202 1 - 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422896 1 - 2520184 t i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e mm10.chr8 86569432 673 - 129401213 I a score=220809.000000 s hg38.chr4_KI270789v1_alt 88198 14 + 205944 AAAACTAAATGAAG s panTro5.chr4 192879861 14 + 194502333 AAAACTAAATGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763694 14 + 195804263 AAAACTAAATGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800097 14 + 4876863 AAAACTAAATGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689659 14 + 115148730 AAAACTAAATGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971585 14 + 190429646 AAAACTAAATGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914340 14 + 189454096 AAAACTAAATGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301073 14 - 25927173 AAAACTAAATGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335536 14 + 4669795 AAAACTAAATGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293834 14 + 135778131 AAAACTAAATGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731931 14 - 2847728 AAAACTAAATGAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861277 14 + 2368649 AAAACTAAATGAAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084078 14 - 14256875 aaaaCTAAATGAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979119 14 - 2196201 AAAACTAAATGAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373888 14 - 5030052 AAAACTAAATGAAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493826 14 - 93316391 AAAACTAAACGAAG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11222727 14 - 11315646 aaaaCCAAATGAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570105 14 - 129401213 aaaacccaaaaaag i mm10.chr8 I 673 C 0 s canFam3.chr16 16937203 14 - 59632846 AAAATTAGATAAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1422897 14 - 2520184 aaaaCTAAATGAgg i dasNov3.JH570353 C 0 I 8915 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I a score=631518.000000 s hg38.chr4_KI270789v1_alt 88212 60 + 205944 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAG-TGTATTGAAATCCATGGACCTAAAAT s panTro5.chr4 192879875 59 + 194502333 TCATAAAAATTTG-A-------TTTTTTTCTAAAGAAAAAG-TGTATTGAAATCCATGGACCTAAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763708 59 + 195804263 TCATAAAAATTTG-A-------TTTTTTTCTAAAGAAAAAG-TGTATTGAAATCCATGGACCTAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800111 59 + 4876863 TCATAAAAATTTG-A-------TTTTTTTCTAAAGAAAAAG-TGTATTGAAATCCATGGACCTAAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689673 59 + 115148730 TCATAAAAATTTG-A-------TTTTTTTCTAAAGAAAAAA-TGTATTGAAATCCATGGGCCTAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971599 60 + 190429646 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914354 60 + 189454096 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301087 60 - 25927173 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335550 60 + 4669795 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293848 60 + 135778131 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2731945 60 - 2847728 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTAAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861291 60 + 2368649 TCATAAAAATTTG-A------TTTTTTTTCTAAAGAAAAAA-TCTATTGAAATCCATGGACCTGAAAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084092 62 - 14256875 TCATAAAAATTTGTT------TTTTTTTTCCAAAGAAAAAACTCTACTGAAATCCATGGACCTAAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979133 61 - 2196201 TCATAAAAATTTG-A------TTTTTTTTCCAAAGAAAAAACTCTACTGAAATCCATGGACCTAAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373902 61 - 5030052 TTGTAAAAATATG-A------TTTTTTTTCCAAAGAAAAAACTCTACTGAAATCCATGGACCTAAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17493840 65 - 93316391 TCACAAAATTTTG-ATGTCT-TTTTTTTTCTAAAGAAAAAG-ATCTCTGAAATCTATGGACCTAAAAT i micMur3.chr14 C 0 I 121 s otoGar3.GL873580 11222741 51 - 11315646 TCACAAAAACTTG-ATGGC--TTTTTTTTCTAAAGAAAAA--------------TATGGACATAAAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570119 49 - 129401213 cc---aaaGTTTC-ATATCTCTTCTTTTTCTCAAGAA---------------TTTATGGGATTAAAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16937217 65 - 59632846 TTAAAGACATTTA-ATGTT--TTCATTCTCCAAAGAAAAAGTTCTATTGAAATCCATGGACCTAAAAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e dasNov3.JH570353 1422911 8915 - 2520184 I a score=196003.000000 s hg38.chr4_KI270789v1_alt 88272 23 + 205944 GTGGCTTATTA----TTA----AAAAAATCC s panTro5.chr4 192879934 23 + 194502333 GTGGTCTATTA----TTT----AAAAAATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763767 23 + 195804263 GTGGTCTATTA----TTT----AAAAAATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800170 23 + 4876863 GTGGCCTATTA----TTA----AAAAAATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689732 23 + 115148730 GTGGCCTATTA----TTA----AAAAAATCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971659 23 + 190429646 GTGGCCTATTA----TTT----AAAAAAACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914414 23 + 189454096 GTGGCCTATTA----TTT----AAAAAAACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301147 23 - 25927173 GTGGCCTATTA----TTT----AAAAAAACC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335610 23 + 4669795 GTGGCCTATTA----TTT----AAAAAAACC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293908 23 + 135778131 GTGGCCTATTA----TTT----TAAAAAGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732005 23 - 2847728 GTGGCCTATTA----TTT----AAAAAAACC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861351 23 + 2368649 GTGGCCTATTA----TTT----TAAAAAGCC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084154 23 - 14256875 GTAGTCTCTTA----TTT----TAAAAAGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979194 23 - 2196201 GTAGTCTCTTG----TTT----TAAAAAGCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373963 23 - 5030052 ATAGTCTCTTA----TTT----TAAAAAGCC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11222792 27 - 11315646 GTAGTTTTTTAAAGTTAT----CAAAAAGCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570168 27 - 129401213 GTCACCTACTA----ATTTGCCAAAAAATCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16937282 27 - 59632846 GTAGCCTCTTAAGTTATC----AAAAAAGCC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17493905 121 - 93316391 I e dasNov3.JH570353 1422911 8915 - 2520184 I a score=471459.000000 s hg38.chr4_KI270789v1_alt 88295 50 + 205944 TATTTAAATATACTTTTGAA-ATAGATACATG------T-------TTCTA---GCATATTTTATTC s panTro5.chr4 192879957 50 + 194502333 TATTTAAATATACTTTTGAA-AGAGATACATG------T-------TTCTA---GCATATTTTATTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763790 50 + 195804263 TATTTAAATATACTTTTGAA-ATAGATACATG------T-------TTCTA---GCATATTTTATTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800193 50 + 4876863 TATTTAAATATACTTTTGAA-ATAGATACATG------T-------TTCTA---GCATATTTTATTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689755 50 + 115148730 TATTTAAATATTCTTTTGAA-ATAGATACATA------T-------TTCTA---GCATATTTTATTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971682 50 + 190429646 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914437 50 + 189454096 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301170 50 - 25927173 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335633 50 + 4669795 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293931 50 + 135778131 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732028 50 - 2847728 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861374 50 + 2368649 TATTTAAATATATGTTTGAA-ATAGATACGTA------T-------TTCTA---GCATATTTTATTC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084177 50 - 14256875 TATTTAAATATACTTTTGAA-ATAGATACATA------T-------TTCCA---GCATATTTTATTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979217 50 - 2196201 TATTTAAATATACTTTTGAA-ATAGATACATA------T-------TTCTA---GCATATTTTATTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3373986 50 - 5030052 TATTTAAATATGCTTTTGAA-ATAGATATATA------T-------TTCCA---GTGTATTTTATTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11222819 43 - 11315646 TAGtttaatatatttttaaacatatata--------------------ata---acatattttatC- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570195 58 - 129401213 TGATTTAAAACTCCTTTGaa-atatatatatatatattt-------ttcaaaatatatattttGTC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16937309 29 - 59632846 TATTTTAATA----------------------------G-------TTTTA---AAATATTTTATGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1431826 58 - 2520184 tatatatatatatatataaagatacacacaca------tacacacatTCTA---GCATATTTTATCT i dasNov3.JH570353 I 8915 C 0 e calJac3.chr3 189594403 224 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17493905 121 - 93316391 I a score=194472.000000 s hg38.chr4_KI270789v1_alt 88345 17 + 205944 ACCCTGTACTTACTC----TC s panTro5.chr4 192880007 17 + 194502333 ACCCTGTACTTATTC----TC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763840 17 + 195804263 ACCCTGTACTTATTC----TC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800243 17 + 4876863 ACCCTGTACTTATTC----TC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689805 17 + 115148730 ACCCAGTACTTATTC----TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971732 17 + 190429646 ACCCAGTACTTATTC----TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914487 17 + 189454096 ACCCAGTACTTATTC----TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301220 17 - 25927173 ACCCAGTACTTATTC----TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335683 17 + 4669795 ACCCAGTACTTATTC----TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293981 17 + 135778131 ACCCAGTACTTATTC----TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732078 17 - 2847728 ACCCAGTACTTATTC----TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861424 17 + 2368649 ACCCAGTACTTAGTT----TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189594627 17 - 190850796 atccAATACTTACTC----TT i calJac3.chr3 I 224 C 0 s saiBol1.JH378165 13084227 17 - 14256875 ACCCAATACTTACTC----TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979267 21 - 2196201 ACCCAATACTTACTCATAATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374036 17 - 5030052 ACCCAATACTTACTC----TT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11222862 17 - 11315646 ACCCAATAGTTATTC----TT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570253 17 - 129401213 ACCAAATTGCCACGT----TT i mm10.chr8 C 0 C 0 s canFam3.chr16 16937338 16 - 59632846 -ACCAGTATTTATTC----TT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1431884 17 - 2520184 ATGCAATGTTTATTT----TT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17493905 121 - 93316391 I a score=4035814.000000 s hg38.chr4_KI270789v1_alt 88362 300 + 205944 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--A-AG---AAAGTCATTGTTTTTCTTCCTGACAACATTTAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTC--AAAAA-AGA---ATGAAAT-------TAGTATTCAA--AAGATATCACTAATAAAAATCATTGATCAATTTAAAGAAGTTATTAACATATAAC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA s panTro5.chr4 192880024 301 + 194502333 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATTGTTTTTCTTCCTGACAACATTTAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GA----AATCTATGAGGTC--AAAAA-AGA---ATGAAATAAGT--ATAGTATTCAA--AAGATATCACTAACAAAAATCATTGATCAATTTAAAGAAGTTATTAACATATAAC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192763857 301 + 195804263 TTATGAGAATTACACCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATTGTTTTTCTTCCTGACAACATTTAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GA----AATCTATGAGGTC--AAAAA-AGA---ATGAAATAAGT--ATAGTATTCAA--AAGATATCACTAACAAAAATCATTGATCAATTTAAAGAAGTTATTAACATATAAC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800260 305 + 4876863 TTATCAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATTGTTTTTCTTCCTGACAACATTTAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTC--AAAAA-AGA---ATGAAATAAGT--ATAGTATTCAA--AAGATATCACTAACAAAAATCATTGATCAATTTAAAGAAGTTATTAACATATAAC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112689822 306 + 115148730 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTAATTTTTTTTCTTCCTGACAACATTTAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGAATTTAT--GAAATTAATCTATGAGGTC--AAAAA-AGA---ATGAAATAAGT--ATAGTATTCAA--AAGATATCACTAACAAAAATCATTGATAAATTTAAAGAAGTTATTAACATATAAC-AATGTTAAGTAGTTCATTATACTTTAAATTATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188971749 304 + 190429646 TCATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--GAGCTATCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914504 304 + 189454096 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--GAGCTATCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301237 304 - 25927173 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCCAATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--GAGCTATCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3335700 304 + 4669795 TCATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--GAGCTAGCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134293998 304 + 135778131 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--AAGATATCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACT-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732095 304 - 2847728 TCATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCGCATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-AGA---GTGAAATAACT--ATAGTATTCAA--GAGCTATCACTAACAAAAATCATTGATAAATTTAAATAAGTTATTAACATATACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTTAAAAAGTAAATCTGCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861441 298 + 2368649 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATAAAAATAACT--G-AG---AAAGTCATT-TTTTTCTTCCTGACAACATATAAATGTTGGAAGCCACATCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAT--GAAATTAATCTATGAGGTT--AAAAA-GGA---GTGAAATAACT--GTAGTATTCAA--AAGCTATCACTAACAAAAATCATTGA------TAAATAAGTTATTAACATGTACC-AATGTTAAGTAGTTCATTATACTTTAAA-TATTTCCAGTCTATTGTTAGTTAAAAAGTAAATCTGCTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189594644 302 - 190850796 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATA-TTTTTCTTCCTGACAAGATTTAAATGTTGGAAGTGACAGCTTT---ATTAAGTTACGTTCAGCTGATCGCATTTAG--GAAATTAGTCTATGAGGTT--AAAAAGAAA---ATGAAATGGGT--ATAGTAGTCAA--AGGGTGTCACTAACAAAAATCACTGACAAATTTAAAGAAGTTATTAACATAAAAC-GATGCTATGTAGTTCATTATACTTTCAA-TATTTCCAGTCTATTATTAGTT---AAGTAAATCTActa i calJac3.chr3 C 0 I 1337 s saiBol1.JH378165 13084244 302 - 14256875 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATA-TTTTTCTTCCTGACAAGATTTAAATGTTGGAAGCCACAGGTTT---ATTAAGTTACATTCAGCTGATTGCATTTAG--GAAATTAGTCTGTGAGGTT--AAAAAGAAA---ATGAAATGGGT--ATAGTATTCAA--AGGATATCACTAACAAAAATCATTGACAAATTTAAAGAAGTTATTAACATAAAAC-AATGCTACATAGTTCATTATACTTTAAA-TATTTCCAGTCTATTATTAGTT---AAGTAAATCTACTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979288 302 - 2196201 TTATGAGAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAACT--G-AG---AAAGTCATA-TTTTTCTTCCTGACAAGATTTAAATGTTGGAAGCCACAGCTTT---ATTAAGTTACATTCAGCTGATTGCATTTAG--GAAATTAGTCTATGAGGTT--AAAAAGAAA---ATGAAATGGGT--ATAGTATTCAA--AGGATATCACTAACAAAAATCACTGACAAATTTAAAGAAGATATTAACATAAAAC-AATGCTACGTAGTTCATTATAATTTAAA-TATTTCCAGTCTATTATTAGTT---AAGTAAATCTACTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374053 299 - 5030052 TTATGATAATTACTCCACAGAAAGTCATCTTGTTTTATGAAAATAA-T--G-AG---AAAGTCATA-TTTTTCTTACTAACAAGATTTAAATGTTGGAAGCCACAGCTTT---ATTAAGTTACATTCATCTGATTGCATTTAG--GAAATTAGTC--TGAGGTT--AAAAAGAAA---ATGAAATGGGT--ATAGTATTCAA--AGGACATCACTAACAAAAATCATTGACAAATTTAAAGAAGTTATTAAAATAAAAC-AATGCTACATAGTTCATTATATTTTAAA-TATTTCCAGTCTATTATTAGTT---AAGTAAATCTACTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17494026 309 - 93316391 TTATGAGAATAACTCCACAGAAAGGCATCTTGCTTTATGAAAATAACTCTG-TA---AGAGTCATC-TTTTTCTTCCTGACTATATTTAAATGTTAGAAGTCACATCTTT---ATTGAGTTACCTTCAGCTGGTTGCATTTAT--GAAGTTCATCTGTGAAGTTAAAAAAA-AAAGC-ATAAAATATGTGAATAATATTCAG--AAGCTATCACTAAC-CATATCACTAATAAATTTAA--AAGTTATTTGCATGTAAC-AATGCTAAGTAGTATATTATACTTCAAA-TATTTCTAATTTATTATTAGTTAAAAAGTAAATCTGCTA i micMur3.chr14 I 121 C 0 s otoGar3.GL873580 11222879 307 - 11315646 TTATGAGAATAACTTCACAGAAAGCCATCTTATTTTACAACAATACTCTGA-AA---AGAGTAATC-TTTTTCTTCTTGACTGTGTTTAAGTGCTGGAAAGCACATCTTT---ATTGAGGTATGTTCAGCTGGCTGCATTTAC--AAAGTTAATATATAAGGTT--AAAGA-AGAGC-ATGGAATATGTGAATAATATTCAA--ATGCTATCACTAAC-AAAACCATCAATACATTTAA--AAGTTACTTGCACATAAC-AATGCTAAGTAGTTTAATATACTTCAAA-CATTTCCAATATGTTATTAGTTAAAAAATAAATCTGCTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570270 301 - 129401213 TTATGAGGCTTGTTGGATTAACATTCACTTTGTTTTGTGAAAATAATC--C-TG---AA---TACA-TTTTCCCTCTGGGCAATATTTAAATGGCAGAATACACAT-TAT---GTTGACTGATAATCCAGTAATTGCATTTAT--GAAGTTATTT--TGAAATT--GAAGA-AAAACAATAAAGTATATTAGTAGTACTCAATGTATATATTAATGAC-ACATTAACTGATGAGTTTA---AAATTATTAATATGTTACGGATGCTGAGTTGCTTATTATTCTTTAAA-TGTTTCCCATTTGTTACAAGTT-AATAGTAAATTTGTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16937354 294 - 59632846 TTGTGAAACTAACTCTGCAGAGAGTCATCT---GTTATGAAAATAACT--C-AGCAAAGAGTCAT--TTTTCCTTCCT--TCACAGTTAAATATTGGTAGCCACATCTTT---ATTGAGTGACATTCAGCTGATTATGTTTAT--GAAATTAATCTATGAGGTT--AAAAAAAGA---ATGGAATATATGAATAGTATTTAA--AAGATATCACTAAC-AAAATCACTGATATTTTAAA-------ATTAGCATATAAC-AATGCTAAATAGTTTATTATACGCTTAA-TATCTTT--TTTATTATTAGTTAAAAAGTAAATCTGTTA i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1431901 273 - 2520184 ----------------------------------TGGTAAAAATAACT--GCAG---AGAGTCAAC-TTTTTCTTAT---CAACATTAAAAGTCTGGAAGCCACATCTTTTTAAGTGAATTACATGCAGTTGTTTACATTTATGGGAAGTTAATCTATGAAGTT--AAAAATAGA---ATGGAATATATGAATAATATTCTA--CAGAAATTGCTAAT-GAAATCATCTACAGAT-TAAGGAAATGCTTAGCATATAGC-AACACTAAGTAATTTATTATACTTTAAG-TATTTACAATGTATTATTAGTTTAAAATTAAGT-TGCTA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I a score=192101.000000 s hg38.chr4_KI270789v1_alt 88662 18 + 205944 GTATTTCCCCCCCAAATT s panTro5.chr4 192880325 17 + 194502333 GTATTT-ACCCCCAAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764158 17 + 195804263 GTATTT-CCCCCCAAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800565 18 + 4876863 GTATTTTCCCCCCAAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690128 18 + 115148730 ATATTTTCCCCCCAAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972053 18 + 190429646 GTATTTTTCCCCCAAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187914808 18 + 189454096 GTATTTTTCCCCCAAATT i macFas5.chr5 C 0 M 1816 s macNem1.NW_012013133v1 24301541 18 - 25927173 GTATTTTTCCCCCAAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336004 18 + 4669795 GTATTTTTCCCCCAAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294302 18 + 135778131 GTATTTTCCCCCCAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732399 18 - 2847728 GTATTTTTCCCCCAAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861739 18 + 2368649 GTATTTTTCCCCCAAATT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084546 18 - 14256875 GTATTTTCCCCCCAAATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979590 18 - 2196201 GTATTTTCCCCCAAAATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374352 18 - 5030052 GTATTGTCTCCCAAAATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17494335 18 - 93316391 ATACTTTTCCCAGAAATT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11223186 18 - 11315646 ATACTTTTTCCAGAAATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570571 17 - 129401213 ATAATT-TTCCATATATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16937651 18 - 59632846 TTTTTTTCCCCAGAAATT i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1432174 18 - 2520184 ACAGTTTTCCTAGAAATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I a score=568106.000000 s hg38.chr4_KI270789v1_alt 88680 52 + 205944 CATTATTTCACCGAATTCCTCTCATCTGAACATAGCTTAGCTGTATT---AAGAT s panTro5.chr4 192880342 52 + 194502333 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGCTGTATT---AAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764175 52 + 195804263 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGCTGTATT---AAGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800583 52 + 4876863 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGCTGTATT---AAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690146 52 + 115148730 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGCTGTATT---AAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972071 52 + 190429646 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301559 52 - 25927173 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336022 52 + 4669795 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294320 52 + 135778131 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732417 52 - 2847728 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861757 52 + 2368649 CATTATTTCACTGAATTCCTCTCATCTGAACATAGCTTAGATGTATT---AAGAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084564 53 - 14256875 CATTATTTCACCAAATTCCTCTCATCTGAGCATAGCTTTGATGTGTGA--AAGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979608 53 - 2196201 CATTATTTCACCGAATTCCTCTCATCTGAGCATAGCTTTGATGTGTTA--AAGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374370 53 - 5030052 CATTATTTCACCGAATTCCTCTCATCTGAGCATCGCTTTGATGTGTTA--AATAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17494353 55 - 93316391 CATGACAGCACTCAATTCCTCTCATCCGAGCATGGCTTAGATGTATTATTAAGAT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11223204 55 - 11315646 CATCCTAGCTCCAAATTCCTCTCCTCTGAGCATGGCTTAGATGTATTATTAAGAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570588 52 - 129401213 CATGAATAAGCTAGAT---TATCATTTGAGCCTAGTTTAGATTCATTACCAGGCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16937669 55 - 59632846 AATTATTGCACTGCATTCCTCTCATCCGAGCATAGCTTAGTAGCATTATTAAGAT i canFam3.chr16 C 0 I 229 s dasNov3.JH570353 1432192 52 - 2520184 TTGGATTGCACTGATTTCCTGTCATCTGAACATAGCATAGATGTTTT---AAGTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e macFas5.chr5 187914826 1816 + 189454096 M a score=692492.000000 s hg38.chr4_KI270789v1_alt 88732 76 + 205944 GTTGCGTAAGACGG-CTCTCAGAAGCTACTTAATTTATTCTAATTAACAAATGTCTGCATTCTTAATGTGTTAATTA s panTro5.chr4 192880394 76 + 194502333 GTTGTGTCAGACGG-CTCTCAGAAGTTATTTAATTTATTCTAATTAACAAATGTCTGCCTTCTTAATATGTTAATTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764227 76 + 195804263 GTTGTGTCAGACAG-CTCTCAGAAGTTATTTAATTTATTCTAATTAACAAATGTCTGCCTTCTTAATATGTTAATTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800635 76 + 4876863 GTTGCGTAAGATGG-CTCTCTGAAGCTATTTAATTTATTCTAATTAACAAGTGTCTGCATTCTTAATGTGTTAATTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690198 76 + 115148730 GTTGCATAAGACGG-CTCTCAGAAGCTATTTAATTTATTCTAATTAACAAATGTCTGCATTCTTAATGTGTTAATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972123 76 + 190429646 GTTGCATAAAATGG-CTCTCAGTAGTTATTTAATTTATTCTAATTAACAAATGTCTGCATTCTTAATGTGTTAATTA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301611 76 - 25927173 GTTGCATAAGATGG-CTCTCAGTAGCTATTTAATTTATTCTAATTAACAAATATCTGCATTCTTAATGTGTTAATTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336074 76 + 4669795 GTTGCATAAGATGG-CTCTCAGTAGCTATTTAATTTATTCTAATTAACAAATATCTGCATTCTTAATGTGTTAATTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294372 76 + 135778131 GTTGCATAAGATGG-CTCTCAGTAGCTATTTAATTTATTCGAATTAACAAATGTCTGCATTCTTAATGTGTTAATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732469 76 - 2847728 GTTGCATAAGATGG-CTCTCAGTAGCTATTTAATTTATTCTAATTAACAAATATCTGCATTCTTAATGTGTTAATTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861809 76 + 2368649 GTTGCATAAGATGG-CTCTCAGTAGCTATTTAATTTATTCTAATTAACAAGTGTCTGCATTCGTAATGTGTTAATTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084617 53 - 14256875 GCTGTGTAAGATGG-TTCTCAGTAGCTATTTAATTTATTCTAATT-----------------------TGTTAATTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979661 53 - 2196201 GCTGTGTAAGATGG-CTCTCAGTTGCTGTTTCATTTATTCTAATT-----------------------TGTTAATTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374423 53 - 5030052 GCTGTGTAAGATGG-CTCTCAGTAGCTATTTAATTTATTCTAATT-----------------------TGTTAATTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17494408 76 - 93316391 GTTGGATAAGGCGG-CTTTCAGTAGCTATTTAAATTATTCTAATTAATAAATGTCTATATTCTAAATACGTTATTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11223259 76 - 11315646 ATTGGATAAGGCCA-GTTCAAGTAGCTATTTAATTTATTCTTATTAATAAATGTCTATATCCTAAATGTGTTATTTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570640 65 - 129401213 AATAAGTGAGATCA-CTC----------CTTACTGTATTCTAACCAATAAATCTGCATATTCT-AATGTTTTACATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16937953 76 - 59632846 ATTGGGTAAGAAAA-TTCTCAGAAGTTATTTAATTCATTCTAATTAATAAAGGCTTATTTTCTCCATGTGTTAATTG i canFam3.chr16 I 229 C 0 s dasNov3.JH570353 1432244 75 - 2520184 GTTGTATGTGACAATTTCTCAGTAGCTAATTAATTTATTCTAATTAATA--TCTCTGTATCCTAAGGGTGTTAATTA i dasNov3.JH570353 C 0 I 740 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e macFas5.chr5 187914826 1816 + 189454096 M a score=551049.000000 s hg38.chr4_KI270789v1_alt 88808 55 + 205944 TTAGGGCTCCCCAATCTCTTATTCGat------tttttcattcaacaagtatttattgaat s panTro5.chr4 192880470 55 + 194502333 TTAGGGCTCCCCAATCTCTTATTCAat------tttttcattcaacaagtatttattgaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764303 55 + 195804263 TTAGGGCTCCCCAATCTCTTATTCAat------tttttcattcaacaagtatttattgaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800711 55 + 4876863 TTAGGGCTCCCCAATCTCTTATTCGat------tttttcattcaacaagtatttattgaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690274 55 + 115148730 TTAGGGCTCCCCAATCTCTTATTCGat------tttttcattcaacaagtatttattgaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972199 55 + 190429646 TTAGGGCTCCCCAGTCTCTTATTTGAA------TATttcattcaacaagtatttattgaat i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301687 55 - 25927173 TTAGGGCTCCCCAATCTCTTATTCGAA------TATttcattcaacaagtatttattgaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336150 55 + 4669795 TTAGGGCTCCCCAATCTCTTATTCGAA------TATttcattcaacaaatatttattgaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294448 55 + 135778131 TTAGGGCTCCCCAATCTCTTATTCGAA------TATttcattcaacaagtatttattgaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732545 55 - 2847728 TTAGGGCTCCCCAGTCTCTTATTTGAA------TATttcattcaacaagtatttattgaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861885 55 + 2368649 TTAGGGCTCCCCAATCCCTTATTCGAA------TATttcattcaacaagtatttattgaat i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084670 55 - 14256875 TCAGGGCGACCCAATCTCTTAGTTGAT------TATCtcattcaacaagtatttattgaat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979714 52 - 2196201 TCAGGGCTCCCCAATCTCTTAGTTGAt------tattccatt---caagtatttattgaat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374476 55 - 5030052 TCAGGGCTCCCCAATCTCTTAGTTAAT------TATttcattcaacaagtatttattgaat i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17494484 55 - 93316391 TTAGGCCTCCTCAGTCTCTAATCCAAT------TATttcattcaacaaaaatttattgaat i micMur3.chr14 C 0 I 2544 s otoGar3.GL873580 11223335 61 - 11315646 TGAGTCCTCCCCAGTCTCTAATTCTATTATTAATATttcattcaatgaaaatgtactgaat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570705 50 - 129401213 TTAAGGTTTTCCAGTTTCT-----AAA------TATTTCACTCAACAAATATTTATTAGGG i mm10.chr8 C 0 C 0 s canFam3.chr16 16938029 54 - 59632846 ATAGGGGTCCCAAGGCTCTGATTCAAT------AATttcattcaacaattatatattgat- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e dasNov3.JH570353 1432319 740 - 2520184 I e macFas5.chr5 187914826 1816 + 189454096 M a score=1360584.000000 s hg38.chr4_KI270789v1_alt 88863 178 + 205944 gcttat--tatg--tcaaaccctcttctaaatattggaataatagtaataa--aacaaatcgaagtttatactctcaataagtttatgttgtaatgaaggatgcaaacag---t----atatacacactgcaatgtcagctagtgataacttttgagagaatagtgaaataacatacatacagggatagaa s panTro5.chr4 192880525 169 + 194502333 gcttat--tatg-----------cttctaaatattggaataatagtaataa--aacaaataaaagtttataccctcaaggagtttatgttgtaatgaaggatgcaaacag---t----atatacacactgcaatgtcagctagtgataacttttgagagaatagtgaaataacataaatacagggatagaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764358 169 + 195804263 gcttat--tatg-----------cttctaaatattggaataatagtaataa--aacaaatcaaagtttataccctcaaggagtttatgttgtaatgaaggatgcaaacag---t----atatacacactgcaatgtcagctagtgataacttttgagagaatagtgaaataacatacatacagggatagaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800766 177 + 4876863 gcttat--tatg--tcagaccctcttctaaatattggaataatagtaataa--aacaaatcaaagtttataccctcaagaagtttatgttgtaatgaaggatgcaaacag---t----atatacacactgcaatgtcagctagtgataacttttgagagaatagtgaaataacatacgtaca-ggatagaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690329 178 + 115148730 gcttat--tatg--tcaaaccctcttctaaatattggaataatagtaataa--aacaaatcaaagtttataccctcaaggagtttatgttgtaatgaaggatgcaaacag---t----atatacacactgcaatgtctgctagtgataacttttgagagaatagtgaaataacatacatacagggatagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972254 170 + 190429646 gcttat--tatg--gcaaaccctcttctaaatattggaataatagtgat-------aaatcaaagtttataccctc---gagcttatgttgtagtgaaggatataaacag---t----atatacacactgcaatgtctgctagtgataaCTTTAGAAACAATAGTGAAATAACAAACATACAGGGATAGAA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301742 173 - 25927173 gcttat--tatg--gcaaaccctcttctaaatattggaataatagtgat-------aaatcaaagtttataccctcaaggaacttatgttgtaatgaaggatgtaaacag---t----atatacacactgcaatgtcagctagtgttaactttggaaagaatagtgaaataacaaacatacagggatagaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336205 173 + 4669795 gcttat--tatg--gcaaaccctcttctaaatattggaataatagtgat-------aaatcaaagtttataccctcaaggagcttatgttgtaatgaaggatgtaaacag---t----ttatacacactgcaatgtcagctagtgttaactttggaaagaatagtgaaataacaaacatacagggatagaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294503 176 + 135778131 gcttat--tatg--gcaaaccctcttctaaatattggaataatagtgat----aacaaatcaaagtttataccctcaaggagcttatgttgtaatgaaggatgtaaacag---t----atatacacagtgcactgtcagctagtgataactctggaaagaatagtgaaataacaaacatacagggatagaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732600 173 - 2847728 gcttat--tatg--gcaaacccttttctaaatattggaataatagtgat-------aaatcaaagtttataccctcaaggagcttatgttgtagtgaaggatgtaaacag---t----atatacacactgcaatgtctgctagtgttaactttggaaagaatagtgaaataacaaacatacagggatagaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 861940 177 + 2368649 gcttat--gatg--gcaaaccctcttctaaatattggaataatagtgataa--aacaaatcagagtttataccctcaaggagcttatgttgtaatgaaggatgtaaacag---t----atatacatgctgcaatgtcagctagtgataactttggaaagagtagtgaaataacaaacatacagggatag-a i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084725 173 - 14256875 gcctgt--tatg--tcagaccctcttctaaatattggaataatagtaataa--aa-aaatgaaagtttttaccctcaaggagcttatgttgtgatgaaggatgtaaacag---t----atat----actgcaatgtcagatggtgataacttttaaaagaatagtacagtaacatacatacagggatagaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979766 176 - 2196201 tcctgt--tatg--tcagaccctcttct-aatactggaataatagtaataa--aa-aaatgaaagtttgtaccctcaaggagcttatgctgtgatgaaggatgtaaacag---t----atatacacactgcaatgtcagatagtgagaacttttaaaagaatagtacagtaacatccatacagggatagaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374531 174 - 5030052 gcctgt--tatg--tcagaccctcttctaaatattggaataatagtaataa--aa-aaatgaaagtttataccctcaaggagcttatgttgtgatgaaggatgtaaacag---t----atatacacactgcaatgtcagatagtaataacttttaaaagaa---tacaataacatacatacagggatagaa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11223396 175 - 11315646 gcctaa--tgtgtagcaagccaaattctaaatattag---aacagttataa--aaaaaatcaaactctatacctgcaggaagcttataacataaccaaggacattggcataact----aaatacatactacaatgtcagacagtgataacttttcaaagagtagt-aaataaca----tatgaagatagaa i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86570755 170 - 129401213 -----G--TGAA--TTGAATATTATTCTAAATACCAAAGAAAAAATAAAAAGTAACAAGT-AAAGACAATATCCTTAAGGATACTAT--TACATTGAAGGATTTAGACAA---T-TAAAAAAAAATACTTCAATCTCAAGTAGTGACCATGTTTTGAAAAACAGTAAAATAGCACA-----AGGGGTATAA i mm10.chr8 C 0 I 3352 s canFam3.chr16 16938083 170 - 59632846 gcctattgtatg--tcaagctctgttctgaatattggggaaaca-----aa--aaaaaattcatattcatatcctcaagaaa-ttacattgtaaggagggatgtaggcca---tgcacaaacatacactataatgtcagatagtgaaaactttt---agaacaataaagaaacatat-----ggaatagaa i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e macFas5.chr5 187914826 1816 + 189454096 M a score=71650.000000 s hg38.chr4_KI270789v1_alt 89041 8 + 205944 a-gtgatgg s panTro5.chr4 192880694 8 + 194502333 a-gtgatgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764527 8 + 195804263 a-gtgatgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800943 8 + 4876863 a-gtgatgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690507 8 + 115148730 a-gtgatgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972424 8 + 190429646 A-GTGATGA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301915 8 - 25927173 a-gtgatga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336378 8 + 4669795 a-gtgatga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294679 8 + 135778131 a-gtgatgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732773 8 - 2847728 a-gtgatga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862117 8 + 2368649 a-gtgatga i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084898 8 - 14256875 a-gtgatgg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979942 8 - 2196201 a-gtgatgg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374705 8 - 5030052 a-gtgatgg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11223571 9 - 11315646 aggtgatgg i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16938253 8 - 59632846 a-tggatgg i canFam3.chr16 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e mm10.chr8 86570925 3352 - 129401213 I e macFas5.chr5 187914826 1816 + 189454096 M a score=35749.000000 s hg38.chr4_KI270789v1_alt 89049 4 + 205944 gaaa s panTro5.chr4 192880702 4 + 194502333 gaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764535 4 + 195804263 gaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800951 4 + 4876863 gaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690515 4 + 115148730 gaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972432 4 + 190429646 GAAA i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301923 4 - 25927173 gaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336386 4 + 4669795 gaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294687 4 + 135778131 gaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732781 4 - 2847728 gaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862125 4 + 2368649 gaaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084906 4 - 14256875 gaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979950 4 - 2196201 gaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3374713 4 - 5030052 gaaa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11223580 4 - 11315646 ggga i otoGar3.GL873580 C 0 I 1 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e macFas5.chr5 187914826 1816 + 189454096 M a score=118451.000000 s hg38.chr4_KI270789v1_alt 89053 17 + 205944 gccttgtctccaccgtc s panTro5.chr4 192880706 17 + 194502333 gccttgtctccaccgtc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764539 17 + 195804263 gccttgtctccaccgtc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800955 17 + 4876863 gccttgtctccatcgtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690519 17 + 115148730 gccttgtctccaccatc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972436 17 + 190429646 GCCTTGTCTCCACCGTC i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301927 17 - 25927173 gccttgtctccaccgtc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336390 17 + 4669795 gccttgtctccaccgtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294691 17 + 135778131 gccttgtctccaccgtc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732785 17 - 2847728 gccttgtctccaccgtc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862129 12 + 2368649 gCCTTGTCTCCA----- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084910 15 - 14256875 gCCTTGTCTCCACCA-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 979954 17 - 2196201 gccttgtctccaccgtg i cebCap1.NW_016107886v1 C 0 I 13 s aotNan1.NW_018492112v1 3374717 17 - 5030052 gccttgtctccaccata i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=57428.000000 s hg38.chr4_KI270789v1_alt 89070 17 + 205944 cttctttccctctcaga s panTro5.chr4 192880723 17 + 194502333 cttctttccctctcaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764556 17 + 195804263 cttctttccctctcaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800972 17 + 4876863 cttcattccctctcaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690536 17 + 115148730 cttcttttcctctcaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972453 17 + 190429646 CTTCGTTTCCTGTCAGT i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301944 17 - 25927173 cttcgtttcctgtcagt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336407 17 + 4669795 cttcgtttcctgtcagt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294708 17 + 135778131 cttcgtctcctgtcagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732802 17 - 2847728 cttcgtttcctgtcagt i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13084925 15 - 14256875 -CGCTTTTCCTCTCAG- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3374734 13 - 5030052 ---cttttcctctcac- i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e cebCap1.NW_016107886v1 979971 13 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e colAng1.NW_012116221v1 862141 0 + 2368649 C e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=986722.000000 s hg38.chr4_KI270789v1_alt 89087 138 + 205944 gctccagccaagtactttctccagcagtcgtgttaaacacactcccttctattattaggcatgtcctgacccctctatctgaaacac-ttgccctttgcctagctaactgctattcttcagtcacagtcaaatactgct s panTro5.chr4 192880740 138 + 194502333 gctccagccaagtgctttctccagcagtcgtgttaaacacactcccttctgttattaggcatgtcctgacccctctgtctgaaacac-ttgccctttgcctagctaactgctattcttcagtcacagtcaaatactgct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764573 138 + 195804263 gctccagccaagtgctttctccagcagtcgtgttaaacacactcccttctgttattaggcatgtcctgacccctctgtctgaaacac-ttgccctttgcctagctaactgctattcttcagtcacagtcaaatactgct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3800989 138 + 4876863 gctccagccaagtactttctccagcagtcgtgttaaacacactcccttctattattaggcatgtcctgacccctctgtctgaaacac-ttgccctttgcctagctaactgctattcttcagtcacagtcaaatactgct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690553 138 + 115148730 gctctagccaagtattttctccagcagtcgtgttaaacacactcccttctgctattaggcatgtcctgacccctctgtctgaaacac-ttgcgctttgcctagctaactgctattcttcagtcacagtcaaatactgct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972470 138 + 190429646 GCTCCAGCCAAGTATTTTCTCCAG-AGTCGTGTTAAACACACTCCGTTCTGTTACTAGgcatgtcctgatccctctatctgaaacactttgccctttgcctaggtaactgcaattcttcagtcatagtcaaatactgct i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24301961 138 - 25927173 gctccagccaagtattttctccag-agtcgtgttaaacacactcccttctgttactaggcatgtcctgatccctctatctgaaacactttgctctttgcctagctaactgctattcttcagtcatagtcaaatactgct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336424 138 + 4669795 gctccagccaagtattttctccag-agtcatgttaaacacactcccttctgttactaggcatgtcctgatccctctatctgaaacactttgctctttgcctagctaactgctattcttcagtcatagtcaaatactgct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294725 138 + 135778131 gctccagccaagtactttatccag-agtcgtgttaaacacacttccttctgttactaggcatgtcctggtccctctctctgaaacactttgctctttgcctagctaactgctattcttcagtcatagtcaaatactgct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732819 138 - 2847728 gctccagccacgtattttctccag-agtcgtgttaaacacactcccttctgttactaggcatgtcctgatcgctctgtctgaaacactttgctctttgcctaggtaactgctattcttcagtcatagtcaaatactgct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862141 137 + 2368649 -CTCCAGCCAAGTATTTTCTCCAG-AGTCGTGTTAAATGCACTCCGTTCTGTTACTAGgcatgtcctgatccctgtatctgaaacactttgccctttgcctagctaactgctattcttcagtcattgtcaaatacagct i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13084940 139 - 14256875 GCTCCAGCCAAGTCTCTTCTCCATCAGTTGTGTTAAACACTCTTCCTTTTGTTACTAAGCATGTTCTGACTTCTCTGTCTGAAACACTTAGCCCTTTGCCTAGGTAACTGATATTCTTCAGCCACAGTCAAATACGGCT i saiBol1.JH378165 C 0 M 1717 s cebCap1.NW_016107886v1 979984 139 - 2196201 gctccagcccagcatcttctccaccggttgtgttaaacacactcccttttgttactaggcatgttctgactcctctatctgaaacgctttgccctttgcctagctaactgctattcttcagccacagtcaaatacggct i cebCap1.NW_016107886v1 I 13 I 1 s aotNan1.NW_018492112v1 3374747 139 - 5030052 gcactcgccaagtatcttctccatcagttgtgttaaacacactcctttttgttactaggcatgttctgactcctctatctgaaacgctttgccctttgcctagctaactgctattcttcagccacagtcaaatacggat i aotNan1.NW_018492112v1 C 0 I 1 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=800188.000000 s hg38.chr4_KI270789v1_alt 89225 129 + 205944 ccacaggcaagccttccccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgacattgtttgtatgatgatttgttcactctattctcctcactagagcatgggATtatat--atat s panTro5.chr4 192880878 129 + 194502333 ccacaggcaagccttctccactcccagccatgctcccagagcatcatgaaacttccatgaaatttggcattgtttgtatgatgatttgctgactctattctcctcactagagcatgggattatat--atat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764711 129 + 195804263 ccacaggcaagccttctccactcccagccatgctcccagagcatcatgaaacttccatgaaatttggcattgtttgtatgatgatttgctgactctattctcctcactagagcatgggattatat--atat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3801127 128 + 4876863 ccacaggcaagccttccccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgccattgtttgtatgatgatttgctcactctattctcctcactagagcatgggattatat---tat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690691 131 + 115148730 ccacaggccagccttccccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgacattgtttgtatgatgatttgctcactctattctcctcactagagcatgggattatatatatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972608 129 + 190429646 ccacaggcaagccttccccactcccagccatgctcccagagcttcatgaaacttccatgaaatttgacactgtttgtatgattatttgctcactctattctcctcagtagagcatggggttatat--atat i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24302099 126 - 25927173 ccacaggcaagccttgcccactcccagCCATGTTCCCAGAGCATCATGAAACTTCCATGAAATTTGACACTGTTTGTATGATTATTTGCTCACTCTATTCTCCTC---AGAGCATGGGATtatat--atat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3336562 129 + 4669795 ccacaggcaagccttgcccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgacactgtttgtatgattatttgctcattctattctcctcagtagagcatgggattatat--atat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294863 128 + 135778131 ccacaggcaagcctt-cccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgacactgtttgtatgattatttgctcactctattctcctcagtagagcatgagattatat--atat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2732957 129 - 2847728 ccacaggcaagccttccccactcccagccatgctcccagagcatcatgaaacttccatgaaatttgacactgtttgtatgattatttgctcactctattctcctcagtagagcatgggattatat--atat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862278 128 + 2368649 ccacaggcaagccttccccactcccagccgtgctcccagagcatcacgaaacttccatgaaatttgacactg-ttgtatgattatttgctcactctgttctcctcagtagagcatgggattatat--agat i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 980124 127 - 2196201 ccacaggcaagccttccc--ctctcagacgtcctccctgaacatcgtgaaacttccatgaaatctgacatgatttcaatggctgtttgctcactctgttctcctcactagagcatgggACtatat--atat i cebCap1.NW_016107886v1 I 1 I 1933 s aotNan1.NW_018492112v1 3374887 127 - 5030052 ccacaggcaagccttccc--ctctcagacatgctcccagaacatcatgaaacttccatgaagtctgacattatttaaatggttatttgctcactctgttctcctcactagagcatgggAatatat--atat i aotNan1.NW_018492112v1 I 1 I 2842 e calJac3.chr3 189594946 1337 - 190850796 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13085079 1717 - 14256875 M e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=2132466.000000 s hg38.chr4_KI270789v1_alt 89354 466 + 205944 gta-------------------atattac--tatatatatGGCATAGAGTGAATGTTCAATAGAATTAGttgaacgcattattttaagtataatatatcaagaagacaggtttcaaagaccacatattttaaccattctgttcatacgggatgtttagaaaaggcaaatctatggaaaaagaaggtagattagtgtttatgttaccgaaacaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccaatgattgagacgacgagtattgccaaggaagaatctttaatcaggtgctgcagctgaggagatggaaactcactctcaaatccac---ctccctgacctgctaaaaccaggagtttatataacagggaaaaaaaatgcaactgtgtgtaagaaaacaggaactagggagacgcaaggaagccatcacggtgaatgaggggtctggcatctcattgtctggatgtgatgatct---g s panTro5.chr4 192881007 478 + 194502333 gtaatcttttttatatatatatatattac--tatatatatggcatagagtgaaagttcaatagaattagttgaacgca-----ttaaGTATAATATACCaagaagacaggttccaaagaccacatattttaaccattctgtttatacggcatgtttagaaaaggcaaatctatggaaaaagaaggtagattagtgtttatgttactgaaacaccaggggttcagtcaaggtcctgctactccctgcacagaaagccaatgattgagatggcgagtattgccaaggaagaatctttaatcaggtgctgcagctgaggagatggaaactcactctctaatccat---ctccctgacccactaaaaccaggagtttatataacaggg-aaaaaaatgcaactgtgtgtaagaaaacaggaactagggagacgcaaggaagccatcatggttaatgaggggtctggcatctcattgcccggacgtgatgatct---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192764840 478 + 195804263 gtaatcttttatatatatatatatattac--tatatatatggcatagagtgaaagttcaatagaattagttgaacgca-----ttaaGTATAATATACCaagaagacaggttccaaagaccacatattttaaccattctgtttatacggcatgtttagaaaaggcaaatctatggaaaaagaaggtagattagtgtttatgttactgaaacaccaggggttcagtcaaggtcctgctactccctgcacagaaagccaatgattgagatggcgagtattgccaaggaagaatctttaatcaggtgctgcagctgaggagatggaaactcactctctaatccat---ctccctgacccactaaaaccaggagtttatataacaggg-aaaaaaatgcaactgtgtgtaagaaaacaggaactagggagacgcaaggaagccatcatggttaatgaggggtctggcatctcattgcccggatgtgatgatct---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3801255 464 + 4876863 gta-------------------atattac--tatatatatggcacagagtgaatgttcaatagaattagttgaacgcatTATTTTAAGTATAATATATCaagaagacaggtttcaaagaccacatattttaaccattctgtttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggtagattagtgtttatgttaccgaaacaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccaatgattgagacgacgagtattgccaaggaagaatctttaaacaggtgctgcagctgaggagatggaaactcactctcaaatccac---ctccctgacccgctaaaaccaggagtttatataacagggaaaaaaaatgcaac--tgtgtaagaaaacaggaactagggagaggcaaggaagccatcatggtgaatgaggggtctggcatctcattgtccggatgtgatgatct---g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112690822 477 + 115148730 gtaatcttttatatat------atattac--tatatatgtggcatagagtgaatgttcaatagaattagttgaacgcatTATTTTAAGTATAATATACCaagaagacaggttccaaagaccacatattttaaccattctgtttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggtagattagtgtttatgttaccgaaacaccaggggttctttcaaggtactactactcgctgcacagaaagccaatgattgagacgacgagtattgccaaggaagaatctttaatcaggtgttgcagctgaggagatggaaactcactctcaaatccat---ctccctgacccactaaaaccaggagtttatataacaggg--aaaaaatgcaactgtgtgtaagaaaacaggaactagggagacgcaaggaagccatcatggtgaatgaggggtctggcatctcattgtccggatatgatgatct---g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188972737 481 + 190429646 gtaatattttatatat------attttattgtatatatatggcataaagtggatgttcaatagaattagttgaaCACGTTAT-TTAAGTATAGTATACCaagaagtccggttctaaagaccacatatgttaaccgttctatttatacgggatgtttagaaaaggcaaatctttggaaaaagaaggcagatgagtgtttatgttaccgaagcaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccagtgattgagaccatgagtattgccaaggaagaacctttaatcaggtgctgcagctgaggagatggaaactcagtctcaaatccatctcctccctggcccactaaaaccaggagtttatatagcaggg--aaaaaatgcaactgtgtgtaaggaaacaggaactagggagacgcaaggaagccatcacggtgaatgcggggtctggcatctcgtcgtctggatgcgatgatct---g i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24302225 478 - 25927173 gtaatattttatatat------attttattgtatatatatGGCATAAAGTGGATGTTCAATAGAATTAGTTGAACACGTTAT-TTAAGTATAGTATACCaagaagtcaggttctaaagaccacatatgttaaccgttctatttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggcagatgagtgtttAtgttaccgaagcaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccagtgattgagaccatgagtattgccaaggaagaacctttaatcaggtgctgcagctgaggagatggaaactcagtctcaaatccat---ctccctggcccactaaaaccaggagtttatatagcaggg--aaaaaatgcaactgtgtgtaaggaaacaggaactagggagacgcaaggaagccatcacggtgaatgctgggtctggcatctcgttgtctggatgcgatgatct---g i macNem1.NW_012013133v1 C 0 I 1452 s cerAty1.NW_012001672v1 3336691 478 + 4669795 gtaatattttatatat------attttattgtatatatatggcataaagtggatgttcaatagaattagttgaaCACGTTAT-TTAAGTATAGTATACCaagaagtcaggttctaaagaccacatattttaaccgttctatttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggcagatgagtgtttAtgttaccgaagcaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccagtgattgagaccatgagtattgccaaggaagaacctttaatcaggtgctgcagctgaggagatggaaactcagtctcaaatccat---ctccctggcccactaaaaccaggagtttatatagcaggg--aaaaaatgcaactgtgtgtaaggaaacaggaactagggagacgcaaggaagccatcatggtgaatgcggggtctggcatctcgttgtctggatgcgatgatct---g i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134294991 478 + 135778131 gtaatactttatatat------atgttattgtatatatatggcataaagtgaatgttcaatagaattagttgaaCACGTTAT-TTAAGTATAATATACCaagaagtcaggttctaaagaccgcatattttaaccgttctatttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggcagataagtgtttAtgttaccgaaacaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccagtgattgagaccatgggtattgccaaggaagaacctttaatcaggtactgcagctgaggagatggaaactcagtctcaaatccat---ctccctggcccactaaaaccaggagtttgtatagcaggg--aaaaaatacaactgtgtgtaaggaaacaggaactagggagacgcaaggaagccatcagggtgaatgcggggtctggcatctcgttgtctggatgcgatgatct---g i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2733086 481 - 2847728 gtaatattttatatat------attttattgtatatatatggcataaagtggatgttcaatagaattagttgaaCACGTTAT-TTAAGTATAGTATACCaagaagtcaggttctaaagaccacatattttaaccgttctatttatacgggatgtttagaaaaggcaaatctatggaaaaagaaggcagatgagtgtttatgttaccaaaacaccaggggttcggtcaaggtcctgctactcgctgcacagaaagccagtgattgaggccatgagtattgccaaggaagaacctttaatcaggtgctgcagctgaggagatggaaactcagtctcaaatccat---ctccctggcccactaaaaccaggagtttatatagcaggg--aaaaaatgcaactgtgcgtaaggaaacaggaactagggagacgcaaggaagccatcacggtgaatgcggggtctggcatctcgttgtctggatgcgatgatctcact i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862406 478 + 2368649 gtaatattatatatat------attttattgtatatatatggcataaagtggatgttcaatagaattagttgaaCATGTTAT-TTAAGTATAATATACCaagaagtcaggttctaaagaccacatattttaaccattctatttatatgggatgtttagaaaaggcaaatctatggaaaaagaaggcagatgagtgtttatgttaccaaaacaccaggggtttggtcaaggtcctgctactcgctgcacagaaagccagtgattaagaccatgagtattgccaaagaagaacctttaatcaggtgctgcagctgaggaggtggaaactcagtctcaaatccat---ctccctggcccactaaaaccaggagtttatatagcaggg--aaaaaatgcaactgtgtgtaaggaaacaggaactagggagacacaaggaagccatcagggtgaatgcggggtctggcatctcattgtctaaatgcgatgatct---g i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13085079 1717 - 14256875 M e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=1309268.000000 s hg38.chr4_KI270789v1_alt 89820 352 + 205944 gtgagtttcagttgtttgatac--ttttttttgagagacctgatggtcattttctgagggaggaactcagattaaacaaatataagtttcaagctttaagattagaagggtcaattcctatatttatcagaaaatatctatgagaccactgggtcagtttcatttacccagggctgagagagggaatggggattcactgctgactggcctgagggaacttactggaaagatggaaatgttctaaaactggattatggtgatggttgcagactaagcaagtttactaaaatcactgaatcatactaaaatcattgaattgaaaattagatgaattttatgatatgtaaattatat s panTro5.chr4 192881485 339 + 194502333 gtgagtttcagttgtttgatcc-tttttttttgagagacctgatggtcattttctgagggaggaactcagcttaaacaaatataagtttcaagctttaagattagaagggtcaatt-ctatatttatcaaaaaatatctatgagaccactgggtcagtttcatttacccagggctgagagagggaatggggattcactgctgactggcctgagggaacttactggaaagatggaaatgttctaaaactggattatggtgatggttgcagactaagcaagtttactaaaatcattgaatcatac-------------atgaaaattagatgaattttatgatatgtaaattatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192765318 340 + 195804263 gtgagtttcagttgtttgatcc-tttttttttgagagacctgatggtcattttctgagggaggaactcagcttaaacaaatataagtttcaagctttgagattagaagggtcaattcctatatttatcaaaaaatatctatgagaccactgggtcagtttcatttacccagggctgagagagggaatggggattcactgctgactggcctgagggaacttactggaaagatggaaatgttctaaaactggattatggtgatggttgcagactaagcaagtttactaaaatcattgaatcatac-------------atgaaaattagatgaattttatgatatgtaaattatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3801719 352 + 4876863 gtgagtttcagttgtttgatac--ttttttttgagagacctgatggtcattttctgagggaggaactcagattaaacaaatataagtttcaagctttaagattagaagggtcaattcctatatttatcaaaaaatatctatgagaccactgggtcagtttaatttacccagggctgagagagggaatggggattcactgctgactggcctgagggaacttactggaaagatggaaatgttctaaaactggattatggtgatggttgcagactaagcaagtttactaaaatcattgaatcatactaaaatcattgaattgaaaattagatgaattttatgatatgtaaattatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112691299 341 + 115148730 gtgagtttcagttgtttgatccttttttttttgagagacctgatggtcattttctgaggcaggaactcagattaaacaaataaaagttttaagctttaagattagaagggtcaattcctatatttatcaaaaaatatctatgagaccactgggtcagtttcatttacccagggctgagagagggaatggggattcactgctcactggcctgagggaaattactggaaagatggaaatgttctaaaactgggttatggcgatggttgcagactaagcaagtttactgaaatcattgaatcatac-------------atgaaaattagatgaattttatgatatgtaaattgtat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973218 339 + 190429646 gtgagtttcagttgtttgacac--ttttttttgagagacctgatgatcattttctgagggaggaactcagattaaacaaatttaagtttcaagctttaagattagaagggtcaattcctatatttatcaaaaaatatctgtgagacccctgggtcagtgtcatttacccagggctgagaaagggaatggggattcactgctgactggcctgagggaacttactgcaaagatggaaatgttctaaaactggattctggtgatggttgcagacttagcaagtttactaaaatcattgaatcatat-------------gttaaaattagatgaattttatgatatgtaaattacat i rheMac8.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3337169 339 + 4669795 gtgagtttcagttgtttgatac--ttttttttgagagacctgatgatcattttctgagggaggaactcagattaaacaaatacaagtttcaagctttaagattagaagggtcaattcctatatttatcaaaaaaTATCTGTGAGACCCCTGGGTCAGTGTCATttacccagggctgagaaagggaatggggattcactgctgactggcctgagggaacttactgcaaagatggaaatgttctaaaactggattctggtgatgattgcagacttagcaagtttactaaaatcattgaatcatac-------------attaaaattagatgaattttatgatatgtaaattacat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134295469 339 + 135778131 gtgagttttagttgtttgatac--ttttttttgacagacctgatgatcattttctgagggaggaactcagattaaacaaatataagtttcaagctttaagattagaagggtcgattcctatatttatcaaaaaataccTGTGAGACCCCTGGGTCAGTTTCATTCAcccagggctgagagagggagtggggattcactgctgactggcctgagggaacttactgcaaagatggaaatgtcctcaaactggattctggtgatggttgcagacttagcaagtttactaaaatcattgaatcatac-------------attaaaattagatgaattttatgatatgtaaattatat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2733567 339 - 2847728 gtgagtttcagttgtttgatac--ttttttttgagagacctgatgatcattttctgagggaggaactcagattaaacaaatataagtttcaagctttaagattagaagggtcaattcctatatttatcaaaaaatatctgtgagacccctgggtcagtttcatttacccagggctgagagagggaaaggggattcgctgctgactggcctgagggaacttactgcaaagatggaaatgttctaaaactggattctggtgatggttgcagacttagcaagtttactaaaatcattgaatcatat-------------gttaaaattagatgaattttatgatatgtaaatcacat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 862884 339 + 2368649 gtgagtttcagttgtttgatac--ttttttttgagagacctgatgatcattttctgagggaggaactcagattaaacaaatataagtttcaagctttaggattagaagggtcaattcctatatttatcaaaaaatatctatgagacccctgggtcagtttcatttacccagggctgagagagtgaatggggattcactgctgactggcctgagggaacttactgcaaagatggaaaggttctgaaactggattctggtgatggttgtagacttagcaagtttactaaaatcattgaatcatac-------------attaaaattagatgaattttatgatatgtaaattatat i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189594946 1337 - 190850796 I e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13085079 1717 - 14256875 M e macNem1.NW_012013133v1 24302703 1452 - 25927173 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=794655.000000 s hg38.chr4_KI270789v1_alt 90172 196 + 205944 ctcaataaagGTCtttttatt---ttttatt---tttctttttgagacagtgtcttgctctgttgcccaggctggagtgcagtggcatgatctcggcccactgcaacctctgcctccctggttcaagcaattctcctgcctccgcctcccaagtagctggtactacaggtgtgcgttactgcgcttggctaatttt---------------------------------------------------------------------------------------------tgtatt------ s panTro5.chr4 192881824 202 + 194502333 ctcaataaagGTCtttttattttattttattttatttctttttgagacagcgtcttgctctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcccgggttcaagcacttctcctgcctccgcctcccaagtagctgggactacaggtgtgcgtcactgcgcttggctaatttt---------------------------------------------------------------------------------------------tgtatt------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192765658 202 + 195804263 ctcaataaagGTCtttttattttattttattttatttctttttgagacagcgtcttgctctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcccgggttcaagcacttctcctgcctccgcctcccaagtagctgggactacaggtgtgcgtcactgcgcttggctaatttt---------------------------------------------------------------------------------------------tgtatt------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802071 201 + 4876863 ctcaataaagGTCtttttattttattttattttatttctttttgagacagcatcttgctctg-tgcccaggctggagtgcagtggcacgatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcggcctcccaagtagctgggactacaggtgtgcgtcactgcgcttggctaatttt---------------------------------------------------------------------------------------------tgtatt------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112691640 201 + 115148730 ctcaataaagGTCtttttattttattttatttt-tttctttttgagacagcatcttgctctgttccccaggctggagtacagtggcacgatcttggctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcccaagtagctgggactacaggtgtgcgtcactgtgcttggctaatttt---------------------------------------------------------------------------------------------tgtatt------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973557 195 + 190429646 ctcagtaaagATCtttttattttatttt------tgtctttttgagacagtgtcttgctctgttgcccagactggagtgcggtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgaaactacagatgtacaccaccacgcttggctga-ttt---------------------------------------------------------------------------------------------tgtatt------ i rheMac8.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3337508 195 + 4669795 ctcaataaagGTCtttttattttatttt------tgtctttttgagacagtgtcttgctctgttgcccagactggaatgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgaaactacagatgtgcaccaccacgcttggctga-ttt---------------------------------------------------------------------------------------------tgtatt------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134295808 195 + 135778131 ctcaattaagGTCtttttattttatttt------tgtctttttgagacagtgtcttactctgttgcccagactggagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgaaactacagatgtgcaccaccacgcttggctga-ttt---------------------------------------------------------------------------------------------tgtatt------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2733906 195 - 2847728 ctcaataaagATCtttttattttatttt------tgtctttttgagacagtgtcttgctctgttgcccagactggagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagcgattctcctgccttagcctcccaagtagctgagactacagatgtgcaccaccacgcttggctga-ttt---------------------------------------------------------------------------------------------tgtatt------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863223 195 + 2368649 ctcaataaagGTCtttttattttatttt------tgtctttttgagacaatgtcttgctctgttgcccagactggagtgcagtggcacgatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgctttagcctcccaagtagctgagactacagatgtgcactaccacgcttggctga-ttt---------------------------------------------------------------------------------------------tgtatt------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596283 298 - 190850796 CTCAGTAAAGGCCttttttttttattcttct---tcttcttttgagatggagtcctgctgtgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctccgcttcccaggttcaagctattctcccacctcagcctcccatgtagatgggactacaggcacggaccaccacgcccagccagtttttTTGTGCatatatatatatacatacacacacacacacacacacacacacactatatatatatatatatatatatatatatatatatatatatatatatTTTCTtt i calJac3.chr3 I 1337 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13085079 1717 - 14256875 M e macNem1.NW_012013133v1 24302703 1452 - 25927173 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=246587.000000 s hg38.chr4_KI270789v1_alt 90368 44 + 205944 tttagtagagatgggattttaccatgttggccaagctggtcttg s panTro5.chr4 192882026 44 + 194502333 tttagtagagatgggattttaccatgttggccaagctggtcttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192765860 44 + 195804263 tttagtagagatgggattttaccatgttggccaagctggtcttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802272 44 + 4876863 tttagtagagatgggattttaccatgttggccaagctggtcttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112691841 44 + 115148730 tttagtagagatgggattttaccatgttggccaagctggtcttg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973752 44 + 190429646 tttagtagagatgggattttaccatgttggccaagctggtcttg i rheMac8.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3337703 44 + 4669795 tttagtagagatgggattttaccatgttggccaagctggtcttg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296003 44 + 135778131 tttagtagagatgggattttaccatgttggccaagctggtcttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734101 44 - 2847728 tttagtagagatgggattttaccatgttggccaagctggtcttg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863418 44 + 2368649 tttagtagagatgggattttaccatgttggccaagctggtcttg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596581 44 - 190850796 ttttgtagagacggggtttcaccatgttagccaggatcgtctcg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13086853 44 - 14256875 ttttgtagagatggggtttcactgtattagccaggatggtctcg i saiBol1.JH378165 M 1717 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e macNem1.NW_012013133v1 24302703 1452 - 25927173 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=529049.000000 s hg38.chr4_KI270789v1_alt 90412 94 + 205944 atctcctgtcctcaagtgatctgcccgccacagcctcccaaagtgctgagattacaggcgagagccaccacgcccagccTCAATAAAGTTCTTT--------- s panTro5.chr4 192882070 93 + 194502333 atctcctgtcctcaagtaatctgcccgccacagcctcccaaagtgctgagattacaggctagagccaccacgcccagccTCAATAAAGGTC-TT--------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192765904 93 + 195804263 atctcctgtcctcaagtaatctgcccgccacagcctcccaaagtgctgagattacaggctagagccaccacgcccagccTCAATAAAGGTC-TT--------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802316 93 + 4876863 atctcctgtcctcaagtaatccgcccgccacagcctcccaaagtgctgagattacaggcgagagccaccacgcccagccTCAATAAAGGTC-TT--------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112691885 93 + 115148730 atctcctgtcctcaagtgatctgcccgccacagcctcccaaagtgctgagattacaggtgagagccaccacgcccagccTCAATAAAGGTC-tt--------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973796 93 + 190429646 atctcctgtcctcaagtaatctgcctgccacagcctcccaaagtgctgggattacagtcaagagccaccgtgcccagccTTGATAAAGATC-TT--------- i rheMac8.chr5 C 0 I 1 s macNem1.NW_012013133v1 24304155 93 - 25927173 ATctcctgtcctcaagtaatctgcctgccacagcctcccaaagtgctgggattacaggcaagagccaccgtgcccagccTCGATAAAGGTC-TT--------- i macNem1.NW_012013133v1 I 1452 I 1 s cerAty1.NW_012001672v1 3337747 93 + 4669795 atctcctgtcctcaagtaatctgcctgccacagcctcccaaagtgctgggattacaggcgagagccaccgtgcccagccTCGATAAAGGTC-TT--------- i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134296047 93 + 135778131 atctcctgtcctcaagtaatctgcctgccacagtctcccaaagtgctgggattacaggcgagagccatgatgcccagccTCGATAGAGGTC-TT--------- i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012102221v1 2734145 93 - 2847728 atctcctgtcctcaagtaatctgcctgccacagcctcccaaagtactgggattacaggcaagagccaccatgcccagccTCGATAAAGGTC-TT--------- i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 863462 93 + 2368649 atctcctgtcctcaagtaatctgcctgccacagcctcccaaagtcctgggattacaggcaagagccaccatgcccagccTCGATAAAGGTC-TT--------- i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189596625 97 - 190850796 atctcctgacctc--atgatccacccaccttggcctcccaaaattctgggattataggcatgagccaccacgcccagccC---TTGAAGTC-TTTTTGATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13086897 95 - 14256875 atctcctgacctt--gtgatccacccaccttggcctcccaaaattctgggattacaggcatgagccaccatgctcagccC---TTGAAGTC-TTTTT--TTTT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e macFas5.chr5 187914826 1816 + 189454096 M e otoGar3.GL873580 11223584 1 - 11315646 I a score=77939.000000 s hg38.chr4_KI270789v1_alt 90506 22 + 205944 TTTTTT----------Aaaaaaag------gtagtgac s panTro5.chr4 192882163 22 + 194502333 TTTTTT----------AAAAAAag------gaagtgac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192765997 22 + 195804263 TTTTTT----------AAAAAAag------gaagtgac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802409 22 + 4876863 TTTTTT----------AAAAAAAG------GAAATGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112691978 32 + 115148730 tttttttttttttttAAAAAAAag------gaagtgac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973890 22 + 190429646 ----------------TAAAAaaaaaagatgaagtgat i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187916644 28 + 189454096 TCTTTT----------AAAAAAAAAAAGATgaagtgat i macFas5.chr5 M 1816 C 0 s macNem1.NW_012013133v1 24304249 22 - 25927173 ----------------TAAAAaaaaaagatgaagtgat i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3337841 22 + 4669795 ----------------AAAAAaaaaaagatgaagtgat i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134296142 22 + 135778131 ----------------AAAAAaaaaaagatgaagtgat i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012102221v1 2734239 22 - 2847728 ----------------TAAAAaaaaaagatgaagtgat i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 863556 24 + 2368649 ----AA----------AAAAAaaaaaagatgaagtgat i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189596722 22 - 190850796 TTTTTT----------TAAAAAAA------GAAGTGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13086992 19 - 14256875 TTTTTT----------T---AAag------gaagtgat i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1432319 740 - 2520184 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11223584 1 - 11315646 I a score=7209.000000 s hg38.chr4_KI270789v1_alt 90528 2 + 205944 ta s panTro5.chr4 192882185 2 + 194502333 ta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766019 2 + 195804263 ta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802431 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692010 2 + 115148730 ta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973912 2 + 190429646 tg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187916672 2 + 189454096 tg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304271 2 - 25927173 tg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3337863 2 + 4669795 tg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296164 2 + 135778131 tg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734261 2 - 2847728 tg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863580 2 + 2368649 tg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596744 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087011 2 - 14256875 ga i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1433059 2 - 2520184 TG i dasNov3.JH570353 I 740 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16938261 0 - 59632846 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11223584 1 - 11315646 I a score=45193.000000 s hg38.chr4_KI270789v1_alt 90530 5 + 205944 gggga s panTro5.chr4 192882187 5 + 194502333 gggga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766021 5 + 195804263 gggga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802433 5 + 4876863 GGGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692012 5 + 115148730 gggga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973914 5 + 190429646 gggga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187916674 5 + 189454096 gggga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304273 5 - 25927173 gggga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3337865 5 + 4669795 gagga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296166 5 + 135778131 gggga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734263 5 - 2847728 gggga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863582 5 + 2368649 gggga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596746 5 - 190850796 AGGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087013 5 - 14256875 aggaa i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16938261 5 - 59632846 gggca i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433061 5 - 2520184 GGGAA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11223584 1 - 11315646 I a score=110864.000000 s hg38.chr4_KI270789v1_alt 90535 17 + 205944 agtgtaaggatgtggga s panTro5.chr4 192882192 17 + 194502333 agtgtaaggatgtgggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766026 17 + 195804263 agtgtaaggatgtgggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802438 17 + 4876863 AGTGTAAGGATGTGGgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692017 17 + 115148730 agtgtaaggatgtgggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973919 17 + 190429646 agtgtaaggattttggg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187916679 17 + 189454096 agtgtaaggattttggg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304278 17 - 25927173 agtgtaaggactttggg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3337870 17 + 4669795 agtgtaaggattttggg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296171 17 + 135778131 agtgtaaggattttggg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734268 17 - 2847728 agtgtaaggattttggg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863587 17 + 2368649 agtgtaaggattttggg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596751 7 - 190850796 AGTG----------GGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087018 7 - 14256875 agtg----------ggg i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11223585 16 - 11315646 agtgtagggatatggg- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16938266 17 - 59632846 agtatagagatgtgggg i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433066 15 - 2520184 AGTGT--GGGCGATGGG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 980251 1933 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I a score=4563510.000000 s hg38.chr4_KI270789v1_alt 90552 514 + 205944 gtggccaggga----------aggtctttttaaggagatgctatttgaatagaaaatt-gacatgaaggcaagagccccaaaga-tgtctcgggacagagggctcctggcagggg-agcagtggggatcttaggtgcattgctatgttggaagaacagtggggagtcca-ggtggctgtgg--cgaggtggaatgggggccacaggaggaagcggaggctagggaggag-ccagttaggtat------gtgaggtttggttaattagggtcagggtattgaattttattt------taaatgtgatgagatgctattgaaggatttt-agcaggagagcaacataatttggtttacattttgacagagtcactt----tggctgctg-tacgga----aaaaca--gaagca--ggaagcccagataagaaa----tt----gagtagccagtcacgaaatggtggtgt-----tatggatcagggtgg-aacggtggaggcggtgaaaagt-----------ATGTATCTTATAGA----------TAGAAATATGTGAGAATATCACAGCCTATTCTAAAAACTGCTGAA s panTro5.chr4 192882209 515 + 194502333 gtggccaggga----------aggtctttttaaggagatgctatttgactagaaaatt-gacatgaaggcaagagccctgaaga-tgtctcgggacagagtgctcctggcagggg-agcagtggggatcttaggtgcattgctatgttggaagaacagtggggagtcca-ggtggctgcgg--cgaggtggaatgggggccacaggaggaagcggaggctagggaggag-cctgttaggtat------gtgaggtttggttaattagtgtcagggtattgaattttattt------taaatgtgatgagatgctattgaaggatttt-agcaggagagcaacataatttgatttatattttgacagagttactt----tggctgctg-tacgga----aaaaca--gaagca--ggaagcccagataagaaa----tt----gagtagccagtcacgaaatggtggtgt-----tatggatcagggtggtaacggtggaggcggtgaaaagt-----------ATGTATCTTATAGA----------TAGAAATATGTGAGAATATCACAGCCTATTCTAAAAACTGCTGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766043 515 + 195804263 atggccaggga----------aggtctttttaaggagatgctatttgactagaaaatt-gacatgaaggcaagagccctgaaga-tgtctcgggacagagtgctcctggcagggg-agcagtggggatcttaggtgcattgctatgttggaagaacagtggggagtcca-ggtggctgcgg--cgaggtggaatgggggccacaggaggaagcggaggctagggaggag-cctgttaggtat------gtgaggtttggttaattagtgtcagggtattgaattttattt------taaatgtgatgagatgctattgaaggatttt-agcaggagagcaacataatttgatttatattttgacagagttactt----tggctgctg-tacgga----aaaaca--gaagca--ggaagcccagataagaaa----tt----gagtagccagtcacgaaatggtggtgt-----tatggatcagggtggtaacggtggaggcggtgaaaagt-----------ATGTATCTTATAGA----------TAGAAATATGTGAGAATATCACAGCCTATTCTAAAAACTGCTGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802455 515 + 4876863 gtggccaggga----------aggtctttttaaggagatgctatttgactagaaaatt-gacatgaaggcaagagccctgaaga-tgtctcaggacagagggctcctggcagggg-agcagtggggatcttaggtgcattgctatgttggaagaacagtggggagtcca-ggtggctgcgg--cgaggtggaatgggggccacaggaggaagcggaggctagggaggag-cctgttaggtat------gtgaggtttgggtaattagggtcagggtattgaattttattt------taaatgtgatgagatgctattgaaggatttt-agcaggagagcaacataatttggtttatattttgacagagtcactt----tggctgctg-tacgga----aaaaca--gaagca--ggaagcccagataagaaa----ct----gagtagccagtcacgaaatggtggtgt-----tatggatcagggtggtaacggtggaggcggtgaaaagt-----------ATGTATCTTATAGA----------TAGAAATATGTGAGAATATCACAGCCTATTCTAAAAACTGCTGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692034 514 + 115148730 gtggccaggga----------aggtctttttaaggagatgctatttgactagaaaact-gacatgaaggcaagagccctgaaga-tgtcttgggacagagggctcctggcagggg-agcagtggggatcttaggtgcattgctatgttggaagaacagtggggagtcca-ggtggctgcat--caaggtggaatgggggccacaggaggaagcagaggctagggaagag-ccagttaggtat------gtgaggtttggttaattagggtca-ggtattgaattttattt------taaatgtgatgagacgctattgaaggatttt-agcaggagagcaacataatttggtttacattttgacagagtcactt----tggctgctg-tatgga----aaaata--gaagca--ggaagcccagataagaaa----tg----gagtagccagtcatgaaatggtggtgt-----tatggatcagggtggtaacggtggaggcagtgaaaagt-----------ATCTATCTTATAGA----------TAGAAATATGTGAGAATATCACAGCCTATTCTAAAAACTGCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188973936 512 + 190429646 gaggccaggga----------aggtctttttaaggagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtggggttcttaggtgccttgctatg-tggaagaaccgtggggagtcca-ggtggctgcag--ggtggcggaatgggggccacaggaggaagcggaggcc-gggaggag-ccagtgaggtct------gtgaggtttggttaattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgagggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tggctgcta-tgtggg----aaaata--gaagca--ggaagcccagataagaaa----tt----gggtagccagtcacgaaatggtagtgt-----tatggatcagggtggtaacggtggaggcagtgaaaagt-----------ATGTATCTTGTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187916696 512 + 189454096 gaggccaggga----------aggtctttttaaggagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtggggttcttaggtgccttgctatg-tggaagaaccgtggggagtcca-ggtggctgcag--ggtggcggaacgggggccacaggaggaagcggaggcc-gggaggag-ccagtgaggtct------gtgaggtttggttaattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgagggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tggctgcta-tgtggg----aaaata--gaagca--ggaagccctgataagaaa----tt----gggtagccagtcacgaaatggtagtgt-----tatggatcagggtggtaacggtggaggcagtgaaaagt-----------ATGTATCTTGTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304295 503 - 25927173 gtggccaggga----------aggtctttttaaggagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtgggattcttaggtgccttgctgtg-tggaagaaccgtggggagtcca-ggtggctgtgg--ggtggcggaacgggggccacaggaggaagcggaggcc-gggaggag-acagtgaggtct------gtgaggtttggttgattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgaaggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tggctgcta-tgtggg----aaaata--gaagca--ggaagcccagataagaaa----tt----gggtagccagtcacgaaattgtggtgt-----tacggatcagggtggtaacggtggaggcagtgaacag--------------------tgTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3337887 503 + 4669795 gaagccaggga----------aggtctttttaaggagatactatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtggggttcttaggtgctttgctatg-tggaagaaccgtggggagtcca-ggtggctgcag--ggtggcggaacgggggccacaggaggaagcggaggcc-gggaggag-ccagtgaggtct------gtgaggtttggttgattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgaaggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tggctgcta-tgtgga----aaaata--gaagca--ggaagcccagataagaaa----tt----gggtagccagtcacgaaatggtagtgt-----tatggatcagggtggtaacggtggaggcagtgaacag--------------------tgTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296188 503 + 135778131 gtggccaggga----------aggtctctttaaagagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtggggttcttaggtgccttgctatg-tggaagaaccgtggggagtcca-ggtggctgtgg--ggtggtggaacgggggccacaggaggaagcggaggcc-gggaggag-ccagtgaggtct------gtgagatttggttaattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgagggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tagctgctg-tgtgga----aaaata--gaagca--ggaagcccagataagaaa----tt----gagtagccagttgcgaaatggtggtgt-----tatgaatcagggtggtaacggtggaggcagtgaaaag--------------------tgTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734285 503 - 2847728 gaggccaggga----------agatctttttaaggagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagagggctcctggcggggg-agcagtggggttcttaggtgccttgctata-tggaagaaccgtggggagtcca-ggtggctgcgg--ggtggcggaacgggggccacaggaggaagcggaggcc-gggaggag-ccagtgaggtct------gtgaggtttggttaattagggtcagggtactgaatcttattt------taaatgtgatgaggagctattgagggatttt-agcaggagagcaacataaattggtttacattttgaaagagtcactt----tggctgcta-tgtgga----aaaata--gaagca--ggaagcccagataagaaa----tt----gggtagccagtcacgtaatggtagtgt-----tatggatcagggtggtaacggtggaggcagtgaacag--------------------tgTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTAAAGACTGC-GAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 863604 514 + 2368649 gtggccaggga----------aggtctttttaaggagatgctatttgaatagaaaact-gacatgaaggcgagagccctgaaga-tgtcttgggacagaggactcctggcggggg-agcagtggggctcttaggtgccttgctatg-tggaagaaccgtggggagtcca-ggtggctgtgg--ggtggtggaacgggggccacaggaagaagcggaggcc-aggaggag-ccagtgaggtat------gtgaggtttggttaattagggtcagggtactgaattttattt------taaatatgatgaggagctattgaaggatttt-agcaggagagcaacataaattggtttacattttggaagagtcactt----tggctgctg-tgtgga----aaaata--gaagcaggggaagcccagataagaaa----tt----gagtagccagtcacgaaatggtggtgt-----tatggatcagggtggtaacggtggaggcagtgaaaagt-----------ATGTATCTTGTAGA----------TAGAAATATGTGAGAAAATCACAGCCTAGTCTGAAGACTGC-GAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189596758 509 - 190850796 GTGGCCAGGGCAGTCACCCAAAGGGCTTTTGAAGGAGATACTATCTGAAT-GAAAACT-GACAGGAAGGCAAGAGCCCTGAAGATTATCTTGGGACAGAGGGCTCTGGGGA-GGG-AGCAGTGGGGTTCTTAGGCGCATTGCTGTGTCTga------------agtcca-gatggctggag--ggaggtggaatgtggtccacaggacgaaggggaggctagccaggag-ccgg-taggtat------gtgaggtttggttaattagggtcagggtattgaaatttattt------taaatgtgatgggaggctactgaaggatttt-agcaggagagcagcataatttggtttacattttgaaagaatcactt----tggctgctg-tatgg-----aaaat-----agca--ggaagcccaggtaagaaa----ct----gagtagctagtcaggaaa---tggtgtgtgactaatgctcagcgtggtgaccgctgaggctgtgagaagt-----------ATGTATCTTGTAGA----------TGGAAATATGTGAGAAAATCACAGCCTATTCTAAAAACTGCAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087025 491 - 14256875 gtggccagggc----------agggcttttgaaggagatactatttgaat-gaaaact-gacaggaaggcaagaaccctgaaga-catctggggacagagggtcctgggcagggg-agcagtggggctcttaggctcattgctatgtctgaagaacagtggggagtcca-gatggctggag--ggaggtggaatgtgggccacaggatgaaggggaggctagccaggag-ccagttaggtat------gtgaggtttggttaattagggtcagggtattgaacttcattt------taaatgtgatgggaggctattgaaggatttt-agcaggagagcaacatagtttggtttacattttgaaacaatcactt----tggctgctg-tgtgga----aaaat-----agca--ggaagccctggtaagaaa----tg----g--------------------tggtgt-----tatggatcagggtggtgactgcggaggctgtgaaaagt-----------acgtatcttgtaga----------taGAAATATGTGAGAACATCACAGCCTATTCTAAAAACTGCAGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 982184 490 - 2196201 gtggccagggc----------agagcttttgaaagaggtactatttgaat-gaaaact-gacaggaaggcaagggccctgaaga-tatctggggacagtgggctctgggcggggg-agcagtggagttcttaggggcattgctatgtttgaagaacagtggggggccca-gatggctggag--ggaggtggaatgtgggccacaggacaaaggggaggctagccaggag-ccggttagctat------gtgaggtttggttaattagggtcagggtattgaactttattt------taaatgtgatgggaggctattgaaggatttt-agcaggagagcaacataatttggtttacattttgaaacaatcactt----tggttgctg-tatgg-----aaaat-----agca--ggaagccccggtgagaaa----tg----g--------------------tggtgt-----tatggatcagggtggtgactgatgaagctgtaaaatgt-----------acgtatcttgtaga----------taGAAGTACGTGAGAAAATCACAGCCTATTCTGAAAACTGCAGAA i cebCap1.NW_016107886v1 I 1933 C 0 s otoGar3.GL873580 11223601 497 - 11315646 gtggccatggg----------aggcctctccacaggggtgct------------aagt-gagatgaaggtcagagcccagaagg-tgtct-gggaagggaggctcctggcagggg-c-----------------cacatgcctatgcttgaagaacagggaggacaccagggtggctgaga--agaggcagaactgggggcaggggaagaaagaggagacagagaggag-ccaggtaggtgc------tcaggctttgcataatta------------tggattttattctgttaataaatgtgttgagaagctattga-ggatgtc-agcaggaaagcaacatgatgtggcttacactttgaaaggatgagtg----cagctgccgatggggg----caagtattgaggca--ggaagcacagataggaag----ttactagaacagccaagcaggaaagagtggaga-----ttggggctaggctggtgcgacaggaagaggagagaagtgCAGCATCAAGGCGCATCTTATAGA----------TGAGAGTGTGGGAGAAAATCATAGACtgttctagaaactgcagaa i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16938283 521 - 59632846 gtagccaggta----------agatct----aaggagatgctatttgagtagacaactagaaatcaagtccagag-cctgcaga-cttctgaagagagagggtccgggctggagg-agcagcag-atccttaggcaagttg-tgtgtctgaagattagggaggaggcca-aagtgataaaagtggagggagaacagagg---aaagtagagggggatgtcagcaaggagttcagtcagatatatgtaagtatggcttgcttagttgtgcttagcttactggattttattt------taaatgtgatgagaagctattgaagaattttcagcaggggagca-----------tttacattttaaaaggaccatct----tgactgctt-tatggagcacagagtg--gaagca--agaagc-cagataagaagctattt----gagtagccaggcaagaaatgattatgt-----gatagaccagagtggtcaccatgaaggaggtaaaaagtgtggatagaggatacatc-tGCAGA----------ATGGAATAT-TGAGAAAAGCACATCCtgttctaaaaactgcagaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433081 511 - 2520184 CTGGCCAAGGC----------AGGCCTGTCTAAGGAGATG-TATTGGAGTAAAAGATT-AGAGCAGGGGCTGGAGCGCTGCGGC-TGTCTGGGAGAAGA--GCTCC--GCGGGGGCAGCAGCGGGG--CTCAGGCTTGCTGGTCGAGCTGAAGAGCAGCGAGGGGTGGA-GG-GGCTGGAGCAGAGGGAGCCGTGGAGGGTAAAGGAAG----GGGGGCCCGAAAGGAG-CCCGGCGGGAGT-----CCCAGGGCCTGG---GTTACAGCCTTGACGTTGGAGTTTACTT------TAAACATGACGAGAAGCTACCGGAGGGCTGT-AA-ACTGGAGCCCCACGACCTGG---GCACTTTGCAAGGGTCGCCTCCTCTGGCTCTCG-TCTGGGGG--AGAGTG--GGAGCA--GGGCGTCCAGGCAGGGAG----CGCCCAGAGGAGCCCAGGAAG-AACAGCGGGGA-----CTTGGAGTAGAGCTGGCCCCGGGAGGCCAGAGCACAGG-------------------TGCAGAAGGTGCTCTGCGGAGAGACGTGAGAAAAGCCCAGACTGTTCTAGAAACTGCGGAA i dasNov3.JH570353 C 0 I 46 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I a score=700053.000000 s hg38.chr4_KI270789v1_alt 91066 84 + 205944 TCAT----TGAGTGCAtatagttggagaagtgggtggagcagaacagcataagaagagagtaaagaagtgtgcag-ggtcagattacat s panTro5.chr4 192882724 84 + 194502333 TCAT----TGAGTGaatatagttggggaagtgggtggagcagaacagcataagaagagagtaaagaagtgtgcgg-ggtcagattacat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766558 84 + 195804263 TCAT----TGAGTGaatatagttggggaagtgggtggagcagaacagcataagaagagagtaaagaagtgtgcgg-ggtcagattacat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3802970 84 + 4876863 TCAT----TGAGTGaatatagttggggaagtgggtggagcagaacagcataagaagagagtaaagaagtgtgtgg-ggtcagattacat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692548 83 + 115148730 TCAT----TGAGTGaatatagttggggaagtgggtggagcagaacagcg-aagaagagagtaaagaagtgtgcgg-ggtcagattacat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974448 84 + 190429646 TCAC----TGAGTGaatatagttggggaagtgggtggagcagagcagcctaagaagagagtaaagaagcgtgcgg-ggtcagattacat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917208 84 + 189454096 TCAC----TGAGTGaatatagttggggaagtgggtggagcagagcagcctaagaagagagtaaagaagcgtgcgg-ggtcagattacat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304798 84 - 25927173 TCAC----TGAGTGaatatagttggggaagtgggtggagcagagcagcctaagaagagagtaaagaagcgtgcgg-ggtcagattacat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338390 84 + 4669795 TCAC----TGAGTGaatatagtcggggaagtgggtggagcagagcagcataagaagagagtaaagaagcgtgcgg-ggtcagattacat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296691 84 + 135778131 TCAC----TGAGTGaatatagttggggaagtgggtggagcagagcagcctaagaagagagtaaagaagcgtgcgg-ggtcagattacat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734788 84 - 2847728 TCAC----TGAGTGaatatagttggggaagtgggtggagcagagcagcctaagaagagggtaaagaagcgtgtgg-ggtcagattacat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864118 84 + 2368649 TCCC----TGAGTGaatatagttggggaagtgggtggagcagaacagcctaagaagagagtaaagaagcctgcgg-ggtcagattacat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597267 72 - 190850796 TCAT----GGGGTGAATATAGTcgcggaagtgggcgg------------taagaggagagtccagaagcacgtgg-agtcagattacat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087516 81 - 14256875 TCAT----TGAGTGaatatagtcggggaagtgggcggaccagaacagc-taggag--gagtcaagaagcatgtgg-ggtcagattacat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 982674 83 - 2196201 TCAT----TGCGTGaatatagttggggaagtgggcagagcagaacagcatgagaggagaattaagaagcaggtgg-catcagattac-t i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11224098 84 - 11315646 actcaagaggattgcacgtagtggggg----ggatagggctgagcagca-gagataagattgaagaagcaggtggtggttggcttgcat i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16938804 78 - 59632846 attc----------aatgtgattgaacacgtgagggggatgaagctgggtagtatgagatgaaaaacctgtgtag-gatcagattagaa i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433592 46 - 2520184 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I a score=2012346.000000 s hg38.chr4_KI270789v1_alt 91150 224 + 205944 gaggccttatagggcgtgggac-agagtttcacttca-tcttaaatgcagtgagaagtcattggaggatttc-aggtgcggaatgat--------acagtcggactcac-tcacatgaagattattctgtctg-ccaggtggagaagagctcataggggaagaagcatagaaacccaagagcaagttaagacactaatgg-cagaggttaggcaagaggtggtggtggtgtagattgg s panTro5.chr4 192882808 224 + 194502333 gaggccttatagggcgtgggac-agagtttcacttca-tcttaaatgcagtgagaagtcattggaggatttc-aggtgcggaatgat--------acagttggactcac-tcacatgaagattattctgtctg-ccaggtggagaagagatcataggggaagaagcatagaaacccaagagcaagttaagacactaatgg-cagaggttaggcaagaggtggtggtggtgtagattgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766642 224 + 195804263 gaggccttatagggcgtgggac-agagtttcacttca-tcttaaatgcagtgagaagtcattggaggatttc-aggtgcggaatgat--------acagttggactcac-tcacatgaagattattctgtctg-ccaggtggagaagagatcataggggaagaagcatagaaacccaagagcaagttaagacactaatgg-cagaggttaggcaagaggtggtggtggtgtagattgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803054 224 + 4876863 gaggccttatagggcgtgggac-agagtttcacttca-tcttaaatgcagtgagaagtcattggaggatttc-aggtgcggaatgat--------acagtcggactcac-tcacatgaagattattctgtctg-ccaggtggagaagagatcataggggaagaagcacagaaacccaagagcaagttaagacactaatgg-cagaggttaggcaagaggtggtggtggtgtagattgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692631 224 + 115148730 gaggccttatagggcgtgggac-agagtttcgcttca-tcttaaatgcagtgagaagtcattggaggatttc-aggtgcggaatgat--------acagtcggactcac-tcacataaagattattctgtcta-ccatgtggagaagagatcacaggggaagaagcgtagaaacccgagagcaagttaagacactaatgg-cagaggttaggcaagagatggtggtggtgtagattgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974532 221 + 190429646 gaggccttgtagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagttattggataatttc-agatgtggaatgac--------a----cagactcac-tcacataaagattcttctgtcta-ccatgtggagaagagatcatcggggaagaagagtagacacccgagagcaggttaagaaactaatgg-cagaggttaggcaagagatggtggtggtgtagattgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917292 220 + 189454096 gaggccttatagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagtcattggataatttc-agatgtggaatgac--------a----cagactcac-tcacataaagattcttctgtcta-ccatgtggagaagagatcactggggaagaagagtagacacccgagagcaggttaagaaactaatgg-cagaggttaggcaagagatggt-gtggtgtagattgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24304882 225 - 25927173 gaggccttatagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagttattggataatttc-agatgtggaatgac--------acagtcagactcac-tcacataaagattcttctgtcta-ccatgtggagaagagatcatcggggaagaagagtagacacccgagagcaggttaagaaactaatgg-cagaggttaggcaagagatggtggtggtgtagattgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338474 226 + 4669795 gaggccttatagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagtcattggataatttc-agatgtggaatgac--------acagtcagactcac-tcacataaagattcttctgtctacccatgtggagaagagatcatcggggaagaagagtagacacccgagagcaggttaagaaactaatgg-cagaggttaggcaagagatggtggtggtgtagattgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134296775 225 + 135778131 gaggccttatagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagtcattggataatttc-agatgtggaatgac--------acagttggactcac-tcacataaagattcttctgtcta-ccatgcggagaagagatcattggggaagaagagtagacacccgagagcaagttaagaaactaatgg-cagaggttaggcaagagatggtggtggtgtagattgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2734872 224 - 2847728 gaggccttatagggcgtgggacaagagtttcgcttca-ttttaaatcccgtgagaagtcattggataatttc-agatgtggaatgac--------acagtcagactcac-tcacataaagattcttctgtcta-ccatgtggagaagagatcatcggggaagaagagtagacacccgagagcaggttaagaaactaatgg-cagaggttaggcaagagatggt-gtggtgtagattgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864202 226 + 2368649 gaggccttatagggtgtgggacaagagtttcgcttcctttttaaatcccgtgagaagtcattggataatttc-agatgtggaatgac--------acagtcagactcac-tcccatacagattcttctgtcta-ccatgtggagaagagatcatcggggaagaagagtagacacccgagagcaagttaagaaactaatgg-cagaggttaggcaagagatggtggtgttgtagattgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597339 217 - 190850796 gaggccttatagggtgtgggac-agagtttcgctttg-tttgaaatccggtgagaagccactggaggatttc-agatgcagaatgat--------acagtcggactcac-taacataaggattattctgtcta-ccgcgtggagaagagatccta-gggaagacgggtggaacctggggag-----gaagaagctgattg-cagaggctgggcaggagagggtggtgcggtagat-gg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087597 224 - 14256875 gaggccttacagggtgtgggac-agagtttcgcttta-tttgaaatccaatgagaagtcactggaggatttc-agatgcagaacgat--------acagtcagactcac-taaggtaaagattattctgtcta-ccgtgtggaaaagggatcccaggggaggaagggtagaaactggagagtaatttaagaagctaattg-cagaggttaggcaagagtgggtggcgtgagagttggg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 982757 224 - 2196201 gaggacttttcgggtgtgggac-agagtttcgcttta-tttgaaatccaatgagaagtcactgcaggatttc-agatgcagaatgat--------acagtcagactcac-ttacataaagattattctgtcta-ccatatggagaagagatcctaggggaagaagggcggaaactggggagttattcaagaagctaattg-cagaggttaggcaagagagggtggcgtggcagttggg i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11224182 202 - 11315646 ggg--ctt----------ggat-ggaattttgtttta-ctttaaatacaacaagaaatcagtggaagattttgaggtgcattttgac--------ataatctaactcatattccttaaagcttattctgtcta-gtgtgtgtagaatagattatataggaggaagagtc------------cagcttcagaacctaatgc-tggaggtttggcaagagtccagggcagggtgggctgg i otoGar3.GL873580 C 0 I 42 s canFam3.chr16 16938882 230 - 59632846 gaggccttttaaggcctgggac-agagttt--tttta-ttttaaatgcaatgaaaagttattgggagatttg-aagtgcggaatcacggaatcatatagtctgatttccattacataaagattattgtgtcta-gtaagtggag-ctagatcacagagg-ggaggaatgcaaatttaggagccatttaggaagctattggccaagggctaaatgagagataatggtggtatggactgg i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433638 218 - 2520184 gaggcctg--cgggcatgggg--gaggttttgtttca-ttttaaacgcaatgagaaatctaaggaagatttt-aagt-tggaataat--------gtaactggactcac-attcatgaagattatcctgtcag-gtcggtggagacttgattacagggcaggaa-aatggaaacgtgagaccaggctggaaatctcttgc-caggagctaga-aagagaggctggtggcttggacacc i dasNov3.JH570353 I 46 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I a score=168407.000000 s hg38.chr4_KI270789v1_alt 91374 18 + 205944 gacggtggcaatgcagat s panTro5.chr4 192883032 18 + 194502333 gacggtggcaatgcagat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766866 18 + 195804263 gacggtggcaatgcagat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803278 18 + 4876863 gacagtggcaatgcagat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692855 18 + 115148730 gatggtggcaatgcagat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974753 18 + 190429646 gatggtggcaatgcagat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917512 18 + 189454096 gatggtggcaatgcagat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305107 18 - 25927173 gatggtggcaatgcagat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338700 18 + 4669795 gatggtggcaatgcagat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297000 18 + 135778131 gatggtggcaatgcagat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735096 18 - 2847728 gatggtggcaatgcagat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864428 18 + 2368649 gatggtggcgatgcagat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597556 18 - 190850796 ggtggtggcgatggagac i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087821 18 - 14256875 ggtggtggcaatggagat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 982981 18 - 2196201 ggtggtggcaatggagat i cebCap1.NW_016107886v1 C 0 I 15 s canFam3.chr16 16939112 15 - 59632846 ---gatggagacagagat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433856 18 - 2520184 aaaggtgcctgtgcagga i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=107014.000000 s hg38.chr4_KI270789v1_alt 91392 17 + 205944 -agaaaaataagcgtata s panTro5.chr4 192883050 17 + 194502333 -agaaaaataagagtata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766884 17 + 195804263 -agaaaaataagagtata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803296 17 + 4876863 -agaaaaataagcgtata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692873 17 + 115148730 -ggaaaaataagcgtata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974771 17 + 190429646 -ggaaaaataagcgttta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917530 17 + 189454096 -ggAAAAATAAGCGTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305125 17 - 25927173 -ggaaaaataagcgttta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338718 17 + 4669795 -ggaaaaataagcgttta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297018 17 + 135778131 -ggaaaaatcagcattta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735114 17 - 2847728 -ggaaaaataagcgttta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864446 17 + 2368649 -ggaaaaataagcgttta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597574 16 - 190850796 -ggaaaaataggtgcac- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13087839 17 - 14256875 -ggAAAAACAGGCGCACA i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16939127 16 - 59632846 --gaaaaaagggaatcta i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1433874 18 - 2520184 ggaaaaaatgaacttaag i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 982999 15 - 2196201 I e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=10035.000000 s hg38.chr4_KI270789v1_alt 91409 1 + 205944 c s panTro5.chr4 192883067 1 + 194502333 c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766901 1 + 195804263 c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803313 1 + 4876863 c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692890 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974788 1 + 190429646 c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917547 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305142 1 - 25927173 c i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338735 1 + 4669795 c i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297035 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735131 1 - 2847728 c i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864463 1 + 2368649 c i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13087856 1 - 14256875 C i saiBol1.JH378165 C 0 M 3140 s cebCap1.NW_016107886v1 983014 1 - 2196201 c i cebCap1.NW_016107886v1 I 15 C 0 s canFam3.chr16 16939145 1 - 59632846 t i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1433892 1 - 2520184 c i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189597590 0 - 190850796 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=325423.000000 s hg38.chr4_KI270789v1_alt 91410 42 + 205944 --aagggctc--ctttagaattggaacagatgggataactggatat s panTro5.chr4 192883068 42 + 194502333 --aagggctc--ctttagaattggaacagatgggataactggatac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766902 42 + 195804263 --aagggctc--ctttagaattggaacagatgggataactggatac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803314 42 + 4876863 --aagggctc--ctttagaattggaacagaggggataactggatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692891 42 + 115148730 --aagggctc--ctttagaattggaacagatgggataactggatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974789 42 + 190429646 --aagagctc--ctttagaattggaacagatgggataactggatat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917548 42 + 189454096 --AAGAGCTC--CTTTAGAATTGGAGCAGATGGGATAACTGGATAT i macFas5.chr5 C 0 M 297 s macNem1.NW_012013133v1 24305143 42 - 25927173 --aagagctc--ctttagaattggaacagatgggataactggagat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338736 42 + 4669795 --aagagctc--ctttagaattggaacagatgggataactggatat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297036 42 + 135778131 --aagagctc--ctttagaattggaacagatgggataactggatat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735132 42 - 2847728 --aagagctc--ctttagaattggaacagatgggataactggatat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864464 42 + 2368649 --aagagctc--ctttagaattggcacagatgggataactagatat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597590 42 - 190850796 --gggggctt--ctttagaaccggaacaggtgggataactggatac i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983015 42 - 2196201 --gggggctt--cttcagaactggagcaggtgggatacctggagac i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16939146 42 - 59632846 ----aAGCTTGACTTTGGAATTAGACCAGAAAAGTAGAAGGGAGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433893 42 - 2520184 cacgtggaac--ctgcag--ttagagtggacaggaaaactgattat i dasNov3.JH570353 C 0 I 2 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=176520.000000 s hg38.chr4_KI270789v1_alt 91452 26 + 205944 gagg---aagaggaaactaaagagtgaag s panTro5.chr4 192883110 26 + 194502333 gagg---tagaggaaactaaagagtgaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766944 26 + 195804263 gagg---tagaggaaactaaagagtgaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803356 26 + 4876863 gagg---aagaggaaactaaagagtgaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692933 26 + 115148730 gagg---aagaggaaaataaagagtgaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974831 26 + 190429646 gagg---aagaggaaaataaagagtgaaa i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305185 26 - 25927173 gagg---aagaggaaaataaagagtgaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338778 26 + 4669795 gagg---aagaggaaaataaagagtgaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297078 26 + 135778131 gagg---aagaggaaaataaagagtgaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735174 26 - 2847728 gagg---aagaggaaaataaagagtgaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864506 26 + 2368649 gagg---aagaggaaaataaagagtgaaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597632 26 - 190850796 gggg---aagagggaaggaaagagtgaag i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983057 26 - 2196201 gagg---aagagggaagtaaagaatgaag i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16939188 29 - 59632846 GAGGTCAATGAGGAGACCAGTCAGATATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1433937 26 - 2520184 gagg---ggaggaaaagagaagaacgaag i dasNov3.JH570353 I 2 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=128798.000000 s hg38.chr4_KI270789v1_alt 91478 21 + 205944 catttttggtttgggtaactg s panTro5.chr4 192883136 21 + 194502333 catttttggtttgggtaactg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192766970 20 + 195804263 ca-ttttggtttgggtaactg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803382 21 + 4876863 catttttggtttgggtaactg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112692959 21 + 115148730 catttttggtttgggtaactg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974857 20 + 190429646 catttttggttt-ggtaactg i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305211 20 - 25927173 catttttggttt-ggtaactg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3338804 20 + 4669795 catttttggttt-ggtaactg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297104 21 + 135778131 catttttggtttgggtaactg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735200 20 - 2847728 catttttggttt-ggtaactg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864532 21 + 2368649 catttttggtttgggtaactg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597658 21 - 190850796 catttttggtttgggtgactg i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983083 21 - 2196201 catttttgctttgggtaactg i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16939217 21 - 59632846 TAAATAGGGCTTGGTTAATTG i canFam3.chr16 C 0 I 78 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433963 0 - 2520184 C e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=25720.000000 s hg38.chr4_KI270789v1_alt 91499 6 + 205944 AGTTAC s panTro5.chr4 192883157 6 + 194502333 AGTTAC i panTro5.chr4 C 0 I 1 s panPan2.chr4 192766990 6 + 195804263 AGTTAC i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3803403 6 + 4876863 AGTTAC i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112692980 6 + 115148730 AGTTAC i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 188974877 6 + 190429646 AGTTAC i rheMac8.chr5 C 0 I 1 s macNem1.NW_012013133v1 24305231 6 - 25927173 AGTTAC i macNem1.NW_012013133v1 C 0 I 49 s cerAty1.NW_012001672v1 3338824 6 + 4669795 AGTTAC i cerAty1.NW_012001672v1 C 0 I 36 s chlSab2.chr7 134297125 6 + 135778131 AGTTAC i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2735220 6 - 2847728 AGTTAC i manLeu1.NW_012102221v1 C 0 I 49 s colAng1.NW_012116221v1 864553 5 + 2368649 AGTTA- i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433963 0 - 2520184 C e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=25636.000000 s hg38.chr4_KI270789v1_alt 91505 27 + 205944 GCAG----------ttt--ttttttttgagatggagtct s panTro5.chr4 192883164 25 + 194502333 GCAG----------ttc--ttttttttgagatggagt-- i panTro5.chr4 I 1 C 0 s panPan2.chr4 192766997 26 + 195804263 GCAG----------ttc---tttttttgagatggagtct i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3803410 26 + 4876863 GCAG----------ttt---tttttttgagatggagtct i gorGor5.CYUI01015356v1 I 1 C 0 s nomLeu3.chr7b 112692987 29 + 115148730 GTAG----------tttttttttttttgagatggagtct i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188974884 25 + 190429646 GTAG-----Gttttttt--ttttttttgagac------- i rheMac8.chr5 I 1 C 0 s chlSab2.chr7 134297132 37 + 135778131 GTAGttttttttttttt--ttttttttgagactgagtct i chlSab2.chr7 I 1 C 0 s colAng1.NW_012116221v1 864558 30 + 2368649 -------TAGttttgtt--ttgtttttaagactgagtct i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433963 0 - 2520184 C e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2735226 49 - 2847728 I e cerAty1.NW_012001672v1 3338830 36 + 4669795 I e macNem1.NW_012013133v1 24305237 49 - 25927173 I e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=639037.000000 s hg38.chr4_KI270789v1_alt 91532 137 + 205944 cactctgtcacccaggctggagtgcaacagcacaatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcgtgcaccaccacacacagataa s panTro5.chr4 192883189 135 + 194502333 --ctctgtcacccaggctggagtgcaacagcacgatctcagctcactgcaaccttcacctcccaggttcaagcgattctcctgcctcagcctcccgagtagtggggactacaggcgtgcaccaccacacacagataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767023 137 + 195804263 cactctgtcacccaggctggagtgcaacagcacgatctcagctcactgcaaccttcacctcccaggttcaagcgattctcctgcctcagcctcccgagtagcggggactacaggcgtgcaccaccacacacagataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803436 136 + 4876863 cactctgtcagccaggctggagtgcaacagcaccatctcagctcactgcaaccttcacctcccaggttcaagcgattctcctgcctcagcctccc-agtagctgggactacaggtgtgcaccaccacacacagataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693016 137 + 115148730 cactctgtcactcaggctggagtgcaatagcacgatctcagctcactgcaacctccacctcccaggttcaagcaagtctcctgcctcagcctcccgagtagctgggactacaggcgtgcaccaccacacacagataa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188974909 136 + 190429646 cactctgtcactcaggctggagtgcaatggcacaatctcagctcactgcatcctccacctccc-ggttcaagcgattctcctgcctcacccccccgagtagttgggactacaggcgtgcaccaccacacacagctaa i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305286 137 - 25927173 cactctgtcactcaggctggagtgcaatggcacaatctcagctcactgcatcctccacctcccgggttcaagcgattctcctgcctcacccccccgagtagttgggactacaggcgtgcaccaccacacacagctaa i macNem1.NW_012013133v1 I 49 C 0 s cerAty1.NW_012001672v1 3338866 137 + 4669795 cactctgtcactcaggctggagtgcaatggcacaatctcagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcacccccccgagtagttgggactacaggcgtgcaccaccacacacagctaa i cerAty1.NW_012001672v1 I 36 C 0 s chlSab2.chr7 134297169 137 + 135778131 cactctgtcactcaggctggagtgcaatggcacgatctcagctcactgcaacctctacctcccgggttcaagtgattctcctgcctcactcccctgagtagttgggactacaggcgtgcaccaccacacacagctaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735275 137 - 2847728 cactctgtcactcaggctggagtgcaatggcacaatctcagctcactgcaacctccacctcctgggttcaagcgattctcctgcctcacccccccaagtagttgggactacaggcgtgcaccaccacacacagctaa i manLeu1.NW_012102221v1 I 49 C 0 s colAng1.NW_012116221v1 864588 137 + 2368649 cactgtgtcactcaggctggagtgcaatggcacgatctcagctcactgcaacctccacctcccgggttcaagcgattctcctgcttcaccctgccgagtagttgggactacaggtgtgcaccaccacacacagctaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433963 0 - 2520184 C e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=107262.000000 s hg38.chr4_KI270789v1_alt 91669 20 + 205944 tttttgtgtttttagtagag s panTro5.chr4 192883324 20 + 194502333 tttttgtgtttttagtagag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767160 20 + 195804263 tttttgtgtttttagtagag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803572 20 + 4876863 tttttgtgtttttagtagag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693153 20 + 115148730 tttttgtgtttttagtagag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975045 20 + 190429646 tttttgtgtttttagtagag i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305423 20 - 25927173 tttttgtgtttttagtagag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339003 20 + 4669795 tttttgtgtttttagtagag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297306 20 + 135778131 tttttgtgtttttagtagag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735412 20 - 2847728 tttttgtgtttttagtagag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864725 20 + 2368649 gttttgtgtttttagtagag i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1433963 20 - 2520184 gTTTTCTGACTTCGGTAAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=296542.000000 s hg38.chr4_KI270789v1_alt 91689 63 + 205944 accaggtttcaccatgttggccaggatggtctcgatctcttgacttcgtgatccacccgccct s panTro5.chr4 192883344 63 + 194502333 accaggtttcaccatgttggccaggatggtctcgatctcttgacctcgtgatccacccaccct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767180 63 + 195804263 accaggtttcaccatgttggccaggatggtctcgatctcttgacctcgtgatccacccaccct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803592 63 + 4876863 accaggtttcaccatgttggcctggatggtctcgatctcttgacctcgtgatccacccgccct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693173 63 + 115148730 accaggtttcaccatgttggccaggatggtctcgatctcttgacctcgtgatccacctgccct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975065 63 + 190429646 cccaggtttcaccatgttggccaggatggtctcaatctcttgacctcgtgatctgcccacctt i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305443 63 - 25927173 cccaggtttcaccatgttggccaggatggtctcaatctcttgacctcgtgatctgcccacctt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339023 63 + 4669795 cccaggtttcaccatgttggccaggatggtctcgatctcttgacctcgtgatccgcccacctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297326 63 + 135778131 cccaggtttcaccatgttggccagaatggtctcgatctcttgacctcgtgatccgcccacctt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735432 63 - 2847728 cccaggtttcaccatgttggcaaggatggtctcgatctcttgacctcgtgatccgcccacctt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864745 63 + 2368649 tccaggtttcaccgtgttggccaggatggtcttgatctcttgacctcgtgatccgtcgacctt i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433983 0 - 2520184 C e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e macFas5.chr5 187917590 297 + 189454096 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=239327.000000 s hg38.chr4_KI270789v1_alt 91752 48 + 205944 ggcctcccaacgtgccaggattatgggcccgagccaccacacccagcc s panTro5.chr4 192883407 48 + 194502333 ggcctcccaatgtgccgggattacgggcccgagccaccgcacccagcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767243 48 + 195804263 ggcctcccaatgtgccgggattacgggcccgagccaccgcacccagcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803655 48 + 4876863 ggcctcccaacgtgccgggattacgggcccgagccaccatacccagcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693236 48 + 115148730 ggcctcccaacgtgccgggattatgggtgtgagccactgcacccagcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975128 48 + 190429646 ggcctcccacggtgctgggattacaggcgtgagccaccgcgtccggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917887 48 + 189454096 ggcctcccacagtgctgggattacaggtgtgagccaccgcgtccggcc i macFas5.chr5 M 297 C 0 s macNem1.NW_012013133v1 24305506 48 - 25927173 ggcctcccacggtgctgggattacaggcgtgagccaccgcgtccggcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339086 48 + 4669795 ggcctcccacagtgctgggattacaggcgtgagccaccgcgtccggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297389 48 + 135778131 ggcctcccacagtgctgggattacagacgtgagccaccatgtccggcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735495 48 - 2847728 ggcctcccacagtgctgggattacaggcatgagccaccacgtccggcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864808 48 + 2368649 ggcctcccacagtgctgggattacaggcatgaaccaccgcgtccggcc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1433983 0 - 2520184 C e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=6228.000000 s hg38.chr4_KI270789v1_alt 91800 1 + 205944 C s panTro5.chr4 192883455 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767291 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803703 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693284 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975176 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917935 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305554 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339134 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297437 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735543 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864856 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1433983 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189597679 0 - 190850796 C e cebCap1.NW_016107886v1 983104 0 - 2196201 C e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 91801 1 + 205944 A s panTro5.chr4 192883456 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767292 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803704 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693285 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975177 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917936 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305555 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339135 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297438 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735544 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864857 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597679 1 - 190850796 A i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983104 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1433984 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3375014 2842 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=19125.000000 s hg38.chr4_KI270789v1_alt 91802 2 + 205944 GT s panTro5.chr4 192883457 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767293 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803705 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693286 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975178 2 + 190429646 GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917937 2 + 189454096 GT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305556 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339136 2 + 4669795 GT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297439 2 + 135778131 GT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735545 2 - 2847728 GT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864858 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597680 2 - 190850796 GT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983105 2 - 2196201 GT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3377856 2 - 5030052 GT i aotNan1.NW_018492112v1 I 2842 C 0 s dasNov3.JH570353 1433985 2 - 2520184 AC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16939238 78 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1061724.000000 s hg38.chr4_KI270789v1_alt 91804 124 + 205944 TACAGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACACACATACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTCTTTGAT----GTTTGGCTTTGATTTAATGGGATTTTACT s panTro5.chr4 192883459 124 + 194502333 TACAGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACATACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTATTTGAT----GTTTGGCTTTGATTTAATGGGATTTTACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767295 124 + 195804263 TACAGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACATACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTATTTGAT----GTTTGGCTTTGATTTAATGGGATTTTACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803707 124 + 4876863 TACAGTAGTTTACTCCAGAATAATGCCACATGTATAAACATAGGT---TACATACATACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTCTTTGAT----GTTTGGCTTTGATTTAATGGGATTTTACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693288 124 + 115148730 TACAGTAGTTTACTCCAGAATAATAATACATGTATAAACATAGGT---TAAATACATACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTCTTTGAT----GTTTGGCTTTGATTTAATGGGATTTTACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975180 125 + 190429646 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAAGGGAACATAAGAGTtcttttttgtttatctttgat----gtttggctttgatTTAATGGGATTGTACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187917939 124 + 189454096 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAA-AGAGCATAAGAGTtcttttttgtttatctttgat----gtttggctttgatTTAATGGGATTGTACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305558 125 - 25927173 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAAGGGAACATAAGAGTTCTTTTTTGTTTATCTTTGAT----GTTTGGCTTTGATTTAATGGGATTGTACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339138 120 + 4669795 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAA-AGAACATAAGAGTTCTTT----TTTATCTTTGAT----GTTTGGCTTTGATTTAATTGGATTGTACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297441 124 + 135778131 TATGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAA-AGAACATTAGAATtcttttttgtttatctttgat----gtttggctttgatTTAATGGGATTGTACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735547 124 - 2847728 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAA-AGAACATAAGAGTTCTTTTTTGTTTATCTTTGAT----GTTTGGCTTTGATTTAATGGGATTGTACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864860 124 + 2368649 TACGGTAGTTTACTCCAGAATAATACTACATGTATAAACATAGGT---TACATACACACTTAAA-AGAACATTAGAGTTCTTTTTTGTTTTTCTTTGAT----GTTTGGCTTTGATTTAATGGGATTGTACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189597682 117 - 190850796 TACAGTAGCTTACTCTGTAATAATACTACGTGTGTAAACACAGGT---TACACACCTACTTGAA-AGAACATTAAACTTGTTT--TGTTTTTCTTTGAT----TTTGGGG-----TTTAACGGGATTGTCCT i calJac3.chr3 C 0 I 301 s cebCap1.NW_016107886v1 983107 122 - 2196201 TACAGAGGTTTACTCCATAATAATACTGCATGTGTAAACACAGGT---TACATACCTACTTGAA-AGAACATTAAACTTGTTT--TGTTTTTCTTTGAT----TTTGGGGTTTGATTTAACGGGATTGTCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3377858 122 - 5030052 TACAGTAGCTTACTCCATAATAATACTACATATATAAACACAGGT---TACATACATACTTGAA-AGAACATTAAACTTGTTT--TGTTTTTCTTTGAT----TTGGGGGTTTGATTTAACGGGATTGTCCC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939316 109 - 59632846 TATTGTAGTTCGTT---AAATTATA-------TATAAAGTTAATA---TACACATATACCTCTA----------GTGTTCTTTTTTGTTTTGCTTTGATTTTATTTTGGCTTTGATTTAATGGCATTGTATT i canFam3.chr16 I 78 C 0 s dasNov3.JH570353 1433987 113 - 2520184 TACAGTGGTTCAGT--AAGAAAACGGTATATAAACATACATGTGTACGTACATACATTCTCATG-------------TTCCTTTTTGTTTTGTTTGAGT----TCTGGGCTTTGATTAAATGGGATTGTACC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1223367.000000 s hg38.chr4_KI270789v1_alt 91928 122 + 205944 ATACACATTACTCTTAAGCAAGCCTTTAACActc------agca-ctttaaagtgcttggtacatagtaggcttaagtaatatttTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTATCTCA s panTro5.chr4 192883583 122 + 194502333 ATACACATTACTCTTAAGCAAGCCTTTAACActc------agca-ctttaaagtgcttggtacatagtaggcttaagtaatatttTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767419 122 + 195804263 ATACATATTACTCTTAAGCAAGCCTTTAACActc------agca-ctttaaagtgcttggtacatagtaggcttaagtaatatttTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803831 122 + 4876863 ATACACATTTCTCTTAAGCAAGCCTTTAACActc------agca-ctttaaagcgcttggtacatagtaggcttaagtaatatttTATCACACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693412 122 + 115148730 GTACACATTACTCTTAAGGAAGTCTTTAACACTC------AACA-CTTTAAAGTGCTTGGTACTTAGTAGGCTTACGTAATATTTTATCAAACTGAGCTGGAG-AGTTCTCAGATATTGTTCTCACCTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975305 122 + 190429646 ATACACATTACTCTTAAGCAAGCCTTTAACACTC------AGCA-CTTTAAAGAGCTTGGTACATAGTAGGCTTAAGTAATATTTTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187918063 122 + 189454096 ATACACATTACTCTTAAGCAAGCCTTTAACACTC------AGCA-CTTTAAAGAGCTTGGTACATAGTAGGCTTAAGTAATATTTTGTCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305683 122 - 25927173 ATACACATTACTCTTAAGCAAgcctttaacactc------agca-ctttaaagagcttggtacatagtaggcttaagtaatatttTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339258 122 + 4669795 ATACACATTACTCTTAAGCAAgccttcaacactc------agca-ctttaaagagcttggtacatagtaggcttaagtaatatttTATCAAACTGGGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297565 122 + 135778131 ATACACATTACTCTTAAGCAAGCCTTTAACACTC------AGCA-CTTTAAGGAGCTTGGTACATAGTAGGCTTAAATAATATTTTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735671 122 - 2847728 ATACACATTACTCTTAAGCAAgcctttaacactc------agca-ctttaaagagcttggtacatagtaggcttaagtaatatttTATCAAACTGGGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 864984 122 + 2368649 GTACACATGACTCTTAAGCAAGCCTTTAACACTC------AACA-CTTTAAAGAGCTTGGTACATAGTAGGCTTAAGTGATATTTTATCAAACTGAGCTGGAG-AGTTCTTAGATATTGTTCTTACCTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189598100 122 - 190850796 ATACACGTTACTCTTAAGCAAGCCTTTGACACTT------AACA-CTTTGAAGTGCCTGGTACCTAGTAGGCTCAAGTAATATTTTATCATCCTGAGCTGGAG-AGTTCTTAGTTATTGTTCTTGCCTCA i calJac3.chr3 I 301 C 0 s cebCap1.NW_016107886v1 983229 122 - 2196201 ACACATGTTACTCTTAAGCAAGCCTTTAACGTTT------AACA-CTTTAAAGTGCTTGGTACCTAGTCGGCTTAAGTAATATTTTAGCAACCTGAGCTGGAG-AGTTCTTAGTTACTGTTCTTGCCTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3377980 122 - 5030052 ATACACATTACTCTTAAGCAAGCCTTTAACTCTT------AACA-CTTTAAAGTGCTTGGTACCTAGTAGGCTTAAGTAATGTTTTATCATCCTGAGCTGGAG-AGTTCTTAGTTATTGTTCTTGCCTCA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939425 128 - 59632846 ATACACACAATTC-TAAGCATGTGTTTATCAATTTTTAAACACA-TTTTAAAGTGCCTGATACATAGTAGTCTTAAATAATATTTTAATGCACTGAGCTGAAGTACTTCCTAGATAGTGTTCTTACTTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434100 123 - 2520184 ACCCACATC-CTCCAAATCATGCTTTTATCACTT------AACCTCTTTAGAGTGCTTGAGACATGGCAGGTGTAAATAATAACGTTTTGAACTGAGTGCAAGCACTTCCTAGATGTTGCTCTTCCCTCA i dasNov3.JH570353 C 0 I 1 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=10920.000000 s hg38.chr4_KI270789v1_alt 92050 1 + 205944 A s panTro5.chr4 192883705 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767541 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803953 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693534 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975427 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187918185 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305805 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339380 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297687 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735793 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 865106 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189598222 1 - 190850796 A i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983351 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378102 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939553 1 - 59632846 A i canFam3.chr16 C 0 I 2 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1434223 1 - 2520184 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=2642840.000000 s hg38.chr4_KI270789v1_alt 92051 340 + 205944 ATTcagtcatcccttggtatctgctagggattgcttccaggaaccccatgaatttttttaccaaaatccacagatgctcaagtcccttatacaaaacggtgtcttgtttgcatgtcactgacacacatactccgtgtactt-aaaccatctctagactgcctataatacctaacgtgatgtaaatgctatggaaacagttgttttactgtatcgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatcataggcctaactgccttttcaatctgcacgtggttgaacccatggatgcagagcccgtgggtgctgattgctaact s panTro5.chr4 192883706 340 + 194502333 ATTcagtcatcccttggtatctgctagggattgcttccaggaaccccatgaatttttttaccaaaatccacagatgctcaagtcccttatacaaaacagtgtcttgtttgcatgtcaccgacacacatactccgtgtactt-aaaccatctctagactgcctataatacctaacgtggtgtaaatgctatggaaacagttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatcacaggcctaactgccttttcaatctgcacgtggttgaacccatggatgcagagcccatgggtgctgattgctaact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767542 340 + 195804263 ATTcagtcatcccttggtatctgctagggattgcttccaggaaccccatgaatttttttaccaaaatccacagatgctcaagtcccttatacaaaacagtgtcttgtttgcatgtcaccgacacacatactccgtgtactt-aaaccatctctagactgcctataatacctaacgtggtgtaaatgctatggaaacagttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatcacaggcctaactgccttttcaatctgcacgtggttgaacccatggatgcagagcccatgggtgctgattgctaact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3803954 340 + 4876863 ATTcagtcatcccttggtagctgctagggattgcttccaggaaccccatgaatttttttaccaaaatccacagatgctcaagtcccttatacaaaacgttgtcttgtttgcatgtcaccgacacacatactccgtgtactt-aaaccatctctagactgcctataatacctaacgtgatgtaaatgctatggaaacagttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatcacaggcctaactgccttttcaatctgcacgtggttgaatccatggatgcagagcccgtgggtgctgattgctaatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693535 340 + 115148730 ATTcagtcatcccttggtatctgctagggattgcttccaggaacccaatgaatttttttaccaaaatccatagacgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacgtactccgtatactt-aaaccatttctagactccctataatacctaacacgatgtaaatgctagagaaacagttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatcacaggcctaactgccttttcagtctgtacgtggttgaacctatggatgcagagcccgtgggtgctgattgctaact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975428 337 + 190429646 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaatcatctctagactccctataatacctaacatga-ataaatgctacgggaaccgttgttttactgtattgtttggggaatgacatcaagtctgtacatttttcagtagagatgcaatgattacaggcctaactgccttttcaatctgcacatggttgaacccatggatgcagagcccatgggtgctgatcgctaact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187918186 337 + 189454096 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaatcatctctagactccctataatacctaacatga-ataaatgctacgggaaccgttgttttactgtattgtttggggaatgacatcaagtctgtacatttttcagtagagatgcaatgattacaggcctaactgccttttcaatctgcacatggttgaacccatggatgcagagcccatgggtgctgatcgctaact i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24305806 337 - 25927173 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaatcatctctagactccctataatacctaacacga-ataaatgctacgggaaccgttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgattacaggcctaactgccttttcaatctgcacatggttgaacccatggatgcagagcccatgggtgctgatcgctaact i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339381 336 + 4669795 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaatcatctctagactccctataatacctaacatga-ataaatgctacgggaaccgttgttttactgtattgtttggggaataacatcaagtctgtaca-ttttcagtagagatgcaatgattacaggcctaactgccttttcaatctgcacatggttgaacccatggatgcagagcccatgggtgctgatcgctaact i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134297688 338 + 135778131 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaataatctctagactccctgtaatacctaacatgatgtaaatgctacgggaaccgttgttttactgtgttgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgattacaggcctaactaccttttcaatctgcacatggttgaacgcatggatgcagagcccatgggtgctgatcgctaact i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2735794 337 - 2847728 ATTcagtcatccctgagtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcatgtcactgacacacatactccgtgtactg-aaatcatctctagactccctataatacctaacacga-ataaatgctacgggaacagttgttttactgtattgtttgcggaataacatcaagtctgtacatttttcagtagagatgcaatgattacaggcctaactgccttttcaatctgcacatggttgaacccatggatgcagagcccatgggtgctgatcgctaact i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 865107 338 + 2368649 ATTcagtcatccctgggtatctgctagggattgcttccaggaaccccttg--ctttttaaccaaaatccacagatgctcaagtcccttatacaaaacggtgttgtgtttgcgtgtcactgacacacatactccatgtactg-aaatcatctctagactccctgtaatacctaacacgatgcaaatgctatgggaacagttgttttactgtattgtttggggaataacatcaagtctgtacatttttcagtagagatgcaatgatgacaggcctaactgccttttcagtctgcatgtggttgaactcacggatgcagagcccatgggtgctgatcgctaact i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189598223 333 - 190850796 ATTcagtcatcccctgggatctgctagggatggcttccaggaaccccagg--ctt----cgccaaatccaccgatgctcaagtccattacccaaaaccgtgtcgtgttcgcgtgtcactgacagacgtgctccgcgcacttcacctcgtctccagactacccgtcattcccgacacgatgtaagcgccagggaaacagctggaccactgtggtgtttagggagtaacgtcgagtccatacacttttcagtggagacacaatgatcacaggactcactgcatttt--gtctgcacgaggtggaatcgatggatgcagaggccgtggatgctgattgccaact i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983352 330 - 2196201 ATTcagtcatgccttgggatctcctagggatggcttccaggaaccccacg--ctt----acccaaatccagcgatgctcaagtcctttacacaaagcggtgttgtgttcgtgtgtcactcacagacat-----gtgcactttacctcacctccagactacctatcactcctaatacaacgtaaacgctagggaaacagctgtgctactgtgctgtttagggagcaacatcaagtccgtacgtttttcagcgtacgtgcgatgatcacaggactaactgcattttcagtccgcacgagattgaatcgatgcctgcggagcccgtggacgctgattgccaact i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378103 316 - 5030052 ATTcagtcatcccttgggatctgctagggatggcttccaggaaccccatg--ctt----acccaaatctgccgatgctcaagtccctcacacaaaacggtgtcgtgtttgcgtgtcactgacagacatgctccgtgcactttacctcatctccagactacctgtcattcctaacgcgatgtaaacgctagggaa-----------actgtagtgtttagggagtgacatcaagtctgtacatttttcagtgcagatgcgatgatcacaggactaactgcattttcagtctgcacgtggttgaattgatggatacagagtctgtggatgctgaT-------- i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e dasNov3.JH570353 1434223 1 - 2520184 I e canFam3.chr16 16939554 2 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=18347.000000 s hg38.chr4_KI270789v1_alt 92391 2 + 205944 gT s panTro5.chr4 192884046 2 + 194502333 gT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767882 2 + 195804263 gT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804294 2 + 4876863 gT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693875 2 + 115148730 gC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975765 2 + 190429646 gT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187918523 2 + 189454096 gT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24306143 2 - 25927173 gT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339717 2 + 4669795 gT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134298026 2 + 135778131 gT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2736131 2 - 2847728 gT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 865445 2 + 2368649 gT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189598556 2 - 190850796 gT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983682 2 - 2196201 gT i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1434224 2 - 2520184 GT i dasNov3.JH570353 I 1 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e canFam3.chr16 16939554 2 - 59632846 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3378419 0 - 5030052 C e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=59265.000000 s hg38.chr4_KI270789v1_alt 92393 6 + 205944 ATATCC s panTro5.chr4 192884048 6 + 194502333 ATATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767884 6 + 195804263 ATATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804296 6 + 4876863 ATATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693877 6 + 115148730 ATATCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975767 6 + 190429646 ATATCC i rheMac8.chr5 C 0 I 104 s macFas5.chr5 187918525 6 + 189454096 ATATCC i macFas5.chr5 C 0 I 101 s macNem1.NW_012013133v1 24306145 6 - 25927173 ATATCC i macNem1.NW_012013133v1 C 0 I 101 s cerAty1.NW_012001672v1 3339719 6 + 4669795 ATATCC i cerAty1.NW_012001672v1 C 0 I 101 s chlSab2.chr7 134298028 6 + 135778131 ATATCC i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2736133 6 - 2847728 ATATCC i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 865447 6 + 2368649 ATATCC i colAng1.NW_012116221v1 C 0 I 101 s calJac3.chr3 189598558 6 - 190850796 ATACCC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983684 6 - 2196201 ATATCC i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16939556 6 - 59632846 ATATCC i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1434226 6 - 2520184 AAATGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e aotNan1.NW_018492112v1 3378419 0 - 5030052 C e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=25053.000000 s hg38.chr4_KI270789v1_alt 92399 6 + 205944 TACTTC s panTro5.chr4 192884054 6 + 194502333 TACTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767890 6 + 195804263 TACTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804302 6 + 4876863 TACTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693883 6 + 115148730 TACTTC i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134298035 6 + 135778131 TAGTTC i chlSab2.chr7 I 1 I 94 s manLeu1.NW_012102221v1 2736140 6 - 2847728 TAGTTC i manLeu1.NW_012102221v1 I 1 I 94 s calJac3.chr3 189598564 6 - 190850796 TACTTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983690 6 - 2196201 CACTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378419 5 - 5030052 -ATTTC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939562 6 - 59632846 CATTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434232 6 - 2520184 TATTTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e colAng1.NW_012116221v1 865453 101 + 2368649 I e cerAty1.NW_012001672v1 3339725 101 + 4669795 I e macNem1.NW_012013133v1 24306151 101 - 25927173 I e macFas5.chr5 187918531 101 + 189454096 I e rheMac8.chr5 188975773 104 + 190429646 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=70383.000000 s hg38.chr4_KI270789v1_alt 92405 27 + 205944 TAATCCTTCTTTTGTATGGAGTGAGCT----- s panTro5.chr4 192884060 27 + 194502333 TAATCCTTCTTTTGTATGGAGTGAGCT----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767896 27 + 195804263 TAATCCTTCTTTTGTATGGAGTGAGCT----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804308 27 + 4876863 TAATACTTCTTTTGTATGGAGTGAACT----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693889 27 + 115148730 TAATCCTTCTTTTGTATGGAGTGAGCT----- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189598570 27 - 190850796 TAATCCTTCTTTTGTATGAAGTAAGCT----- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983696 26 - 2196201 TAATCCTTCTTTTGTATGGAGTAAG-T----- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378424 27 - 5030052 TAATCCTTCTTTTGTATGGAGTAAGCT----- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939568 27 - 59632846 TAAGCCATCCTTTCTATAATGTGAGCT----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434238 28 - 2520184 GAATCCCTCCTTAATA----GTAAATTTCACC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e colAng1.NW_012116221v1 865453 101 + 2368649 I e manLeu1.NW_012102221v1 2736146 94 - 2847728 I e chlSab2.chr7 134298041 94 + 135778131 I e cerAty1.NW_012001672v1 3339725 101 + 4669795 I e macNem1.NW_012013133v1 24306151 101 - 25927173 I e macFas5.chr5 187918531 101 + 189454096 I e rheMac8.chr5 188975773 104 + 190429646 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=37887.000000 s hg38.chr4_KI270789v1_alt 92432 4 + 205944 TCCA s panTro5.chr4 192884087 4 + 194502333 TCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767923 4 + 195804263 TCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804335 4 + 4876863 TCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693916 4 + 115148730 TCCA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187918632 4 + 189454096 TCCA i macFas5.chr5 I 101 C 0 s macNem1.NW_012013133v1 24306252 4 - 25927173 TCCA i macNem1.NW_012013133v1 I 101 C 0 s cerAty1.NW_012001672v1 3339826 4 + 4669795 TCCA i cerAty1.NW_012001672v1 I 101 C 0 s chlSab2.chr7 134298135 4 + 135778131 TCCA i chlSab2.chr7 I 94 C 0 s manLeu1.NW_012102221v1 2736240 4 - 2847728 TCCA i manLeu1.NW_012102221v1 I 94 C 0 s colAng1.NW_012116221v1 865554 4 + 2368649 TCCA i colAng1.NW_012116221v1 I 101 C 0 s calJac3.chr3 189598597 4 - 190850796 TCCA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983722 4 - 2196201 TCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378451 4 - 5030052 TCCA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939595 4 - 59632846 TTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434266 4 - 2520184 TCCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e rheMac8.chr5 188975773 104 + 190429646 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=6443637.000000 s hg38.chr4_KI270789v1_alt 92436 728 + 205944 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAA----GTCTGT----GAATCCTCAGGGCT-GTCGGCGTGAGAACCAAAGGCTGCAGTGGTGCACACAATGTCCTTCATCCCAGTAGGTTGATTGTTCAGCATCTGTGTGACCCAACCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAGCTGAATTACAGCTCCTCAAGCACAGTGCTGTCTTGGCTTGGAATGCCCTACTGCTTCTGTTATTATTATGATGACACATTGGTGATTTTTTtcctatgagaatcttctctaatttcccaag-tgtaagttagctatcctcc--tgtgtgtgccctgaaccc--tgtacatccccatcatcacagtagttcattgccttgtaattgcttgcttgc-ttttatgtttctcccattggacaatatat--tccttaaagccaga-ga------tttttccctgtgatattatcctcagaacttaatatagtaTATGTT---GTCATACTAAAAGCTTGATCAATACAACA-TACATAAGTAAAGGAACATTATTCTTCTACATTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTGAAGCAACaggtctggggaa---cacccatactc------------aaggaatggggaggaacaaaaggcattagaaaaaaaagaaatgggatagccgtgaaagcgcaagaacaatgttcagagtgttt-atcacggccgtctgga s panTro5.chr4 192884091 729 + 194502333 AAAAccttctgaaacattaagtcatgctcttctttgaagtctgtctgt----gaatcctcacggct-gtcagcgtgagaaccaaaggctgcagtggtgcacacaatgtccttcatCCCAGTAGCTTGATTGTTCAGCATCTGTGTGACCCAACCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAGCTGAATTACAGCTCCTCAAGCATGGTGCTGTCTTGGCTTGGAATGCCCTACTGCTTCTGTTATTATTATGATGACACATTGGTGATTTTttccctatgagaatcttctctaatttcccaag-tgtaagttagcta---tcc--tgtgtgtgccctgaaccc--tgtacatccccatcatcacagtagttcattgccttgtaattgcttgcttgc-ttttatgtttctcccattggacagtatat--tccttaaagccaga-ga------tttttccctgtgatattatcctcagaacttaatatagtaCATGTT---GTCATACTAAAAGCTTGATCAATACAACA-TATGTAAGTAAAGGAACATTATTCTTCTACATTAGGGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTGAAGCAACaggtctggggaa---cacccatactc------------aaggaatggggaggaacaaaaggcattagaaaaaaaagaaatgggatagccgtgaaagcgcaagaacaatgttcagagtgttt-atcacggccgtctggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192767927 729 + 195804263 AAAAccttctgaaacattaagtcatgctcttctttgaagtctgtctgt----gaatcctcacggct-gtcagcgtgagaaccaaaggctgcagtggtgcacacaatgtccttcatCCCAGTAGCTTGATTGTTCAGCATCTGTGTGACCCAACCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAGCTGAATTACAGCTCCTCAAGCACGGTGCTGTCTTGGCTTGGAATGCCCTACTGCTTCTGTTATTATTATGATGACACATTGGTGATTTTttccctatgagaatcttctctaatttcccaag-tgtaagttagcta---tcc--tgtgtgtgccctgaaccc--tgtacatccccatcatcacagtagttcattgccttgtaattgcttgcttgc-ttttatgtttctcccattggacagtatat--tccttaaagccaga-ga------tttttccctgtgatattatcctcagaacttaatatagtaCATGTT---GTCATACTAAAAGCTTGATCAATACAACA-TATGTAAGTAAAGGAACATTATTCTTCTACATTAGGGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTGAAGCAACaggtctggggaa---cacccatactc------------aaggaatggggaggaacaaaaggcattagaaaaaaaagaaatgggatagccgtgaaagcgcaagaacaatgttcagagtgttt-atcacggccgtctggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3804339 733 + 4876863 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAAGTCTGTCTGT----GAATCCTCACGGCTGGTCAGCGTGAGAACCAAAGGCTGCAGTGGTGCACACAATGTCCTTCATCCCAGTAGCTTGATTGTTCAGCATCTGTGTGACTCAACCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAGCTGAATTACAGCTCCTCAAGCACGGTGCTGTCTTGGCTTGGAATGCCCTACTGCTTCTGTTATTATTATGATGACACGTTGGTGATTTTTTtcctatgagaatcttctctaatttcccaag-tgtaagttagctatcctcc--tgtgtgtgccctgaaccc--tgtacatccccatcatcacagtagttcattgccttgtaattgcttgtttgc-ttttatgtttctcccattggacaatatat--tccttaaagccaga-ga------tttttccctgtgatattatcctcagaacttaatatagtaCATGTT---GTCATACTAAAAGCTTGATCAATACAACA-TACATAAGTAAAGGAACATTATTCTTCTACATTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTGAAGCAGCaggtctggggaa---cacccatactc------------aaggaatggggaggaacaaaaggcattagaaaaaaaagaaatgggatagccgtgaaagcgcaagaacaatgttcagagtgttt-atcacggccgtctggg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112693920 733 + 115148730 AAAAccttctgaaacattaagtcatgctcttctttgaagtctgtctgt----gaatcctcatggct-gtcagcgtgagaacaaaaggctgtagtagcgcacacaatgtccttcatctcagtagcttgattgttcagcatctttttgacccaacctctcctattgtccttggttca--gta--gctgatctactgaactgtgtaactgaattacagttcctcaagcacgGTGCTCTCTTCGTTTGGAATGCCCTACTGCTCCTGTTATTATTATGATGACACATTGGTGATTTTcttcttatgagaatcttctctaatttcccaag-tataagttagctatcctccggtgtgtgtgccctgaaccc--tgtacatccccatcatcatagtagttcattgccttgtaattgcttgttcgc-ttttatgtttctctcattggacaatatat--tccttaaagccaga-ga------tttttccctgtaatattatcctcagaacttaatatagtacgtgtt---GTCATACTAAAACCTTGATAAATACAACA-TACGTAAGTCAAGGAAAATTATTCTTCTACATTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTGAAGCAAgaggtctggggaa---cacccatattc------------aaggaatggggaggcacaaaaggcattagaaaaaaaagaaatgggatagccgtgaaagcacaagaacaa-gttcagagtgttt-atcacagccgtctggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188975877 727 + 190429646 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTGCAGTAGTGCACACAATGTCCTTCATCTCAGTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTACAGCTCCTCAAACGCGGTGCTCTCTTCGTTTGGAATGCCCTGCTGCTCCTGTTATTATTATGATGACACACTGgtgatttccttcctatgagactcttccctaatttcccaggttataagttagatatcctcc--tgtgtgcgccctgagccc--tgtacatccccatcatcacagtggttccttgccttgtaattgcttgtttgctttttatgtttctcccattggacaac--at--tccttcaagccaga-ga------tttttccccataatattatcctcagaacttaatatagtgcatgtt---gtcatattaaaa-tttgataaataaaACA-TACAAATGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTAAAGCAAgaggtctggggaa---cacccatgttt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgagatagctgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i rheMac8.chr5 I 104 C 0 s macFas5.chr5 187918636 727 + 189454096 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTGCAGTAGTGCACACAATGTCCTTCATCTCAGTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTACAGCTCCTCAAACGTGGTGCTCTCTTCGTTTGGAATGCCCTGCTGCTCCTGTTATTATTATGATGACACACTGgtgatttccttcctatgagactcttccctaatttcccaggttataagttagatatcctcc--tgtgtgcgccctgagccc--tgtacctccccatcatcacagtggttccttgccttgtaattgcttgtttgctttttatgtttctcccattggacaac--at--tccttcaagccaga-ga------tttttccccataatattatcctcagaacttaatatagtgcatgtt---gtcatattaaaa-tttgataaataaaACA-TACAAATGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTAAAGCAAgaggtctggggaa---cacccatgttt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgagatagctgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24306256 726 - 25927173 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTACAGTAGTGCACACAATGTCCTTCATCTCAGTAGCTTGATTGTTAAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTACAGCTCCTCAAACGCGGTGCTCTCTTCGTTTGGAATGCCCTGCTGCTCCTGTTGTTATTATGATGACACACTGgtgatttccttcctatgagactcttccctaatttcccaggttataagttagatatcctcc--tgtgtgcgccctgagccc--tgcacatccccatcatcacagtggttccttgccttgtaattgcttgtttgc-ttttatgtttctcccattggacaac--at--tccttcaagccaga-ga------tttttccccataatattatcctcagaacttaatatagtgcatgtt---gtcatattaaaa-tttgataaataaaACA-TACAAATGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTAAAGCAAgaggtctggggaa---cacccatattt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgagatagctgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3339830 728 + 4669795 AAAACCTTCTGAAACATTAAGTCACGCTCTTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTGCAGTAGTGCACACAATGTCCTTCATCTCAGTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTACAGCTCCTCAAACGTGGTGCTCTCTTCGTTTGGAATGCCCTGCTGCTCCTGTTATTATTATGATGACACACTGgtgatttccttcctatgagactcttccctaatttcccaggttacaagttagatatcctcc--tgtgtgcgccctgagccc--tgtacatccccatcatcacagtggttccttgccttgtaattgcttgtttgc-ttttatgtttctcccattggacaac--atactccttcaagccaga-ga------tttttccccataatattatcctcagaacttaatatagtGCATATT---GTCATATTAAAA-CTTGATAAATAAAACA-TACAAAAGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTAAAGCAAgaggtctggggaa---cacccatattt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgagatagctgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134298139 728 + 135778131 AAAACCTTCTGAAACATTTAGTCATGCTCTTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCATGAGAACCAAAGGCTGCAGTAGTGCACACAATGTCCTTCATCTCACTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTACAGCTCCTCAAACGCGGTGCTCTCTTCGTTTGGAATGCCCTGCTACTCCTGTTATTATTATGATGACACACTGGTgatttccttcctgtgagaatcttccctaatttcccaggttgtaagttagatatcctcc--tgtgtgcgccctgagccc--tgtacatccccatcatcacagtggttccttgccttgtaattgcttgtttgc-ttttatgtttctcccattggacaacatat--tccttcaagccaga-ga------attttccctataatattatcctcagaacttaatatagtgcatgtt---gtcatattaaaa-cttgataaataaaACA-TACAAAAGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACATGACTAAAGCAAgaggtctggggaa---cacccatattt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgggatagccgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2736244 725 - 2847728 AAAACCTTCTGAAACATTAAGTCATGCT-TTCTTTGAA----GTCTGT----GAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTGCAGTAGTGCACACAATGTCCTTCATCTCAGTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAAATATGTAACTGAATTACAGCTCCTCAAACACAGTGCTCTCTTCATTTGGAATGCCCTGCTGCTCCTGTTATTATTATGATGACACACTGgtgatttccttcctatgagactcttccctaatttcccaggttataagttagatatcctcc--tgtgtgcgccctgagccc--tgtacatccccatcatcacagtggttccttgccttgtaattgcttgtttgc-ttttatgtttctcccattggacaac--at--tccttcaagccaga-ga------tttttccccataatattatcctcagaacttaatatagtgcatgtt---gtcatattaaaa-tttgataaataaaACA-TACAAATGTAAAGGAAAATTATTCTTCTATACTAGAGAATACAGTTCCTAGGGAAAGTATGTATTTAGACCACACGACTAAAGCAAgaggtctggggaa---cacccatattt------------aaggaatggggaggaacaaaagacataagaaaaaagagaaatgagatagctgtgaaagcgccagaacaatattcagagtattt-atcacggctgtctggg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 865558 732 + 2368649 AAAACCTTCTGAAACATTAAGTCATGCTCTTCTTTGAA----GTCTGTCTGAGAATCCTCACAGCT-GTCAGCGTGAGAACCAAAGGCTGCAGTAGTGCACACAATGACCTCCATCTCCGTAGCTTGATTGTTCAGCATCTTTGTGACCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAGCTGAATTACAGCTCCCCAAATGTGGTGCTCTCTTCGTTTGGAATGCCCTGCTGCTCCTGTTGTTACGATGATGACACATTGGTgatttccttcctatgagaatcctctctgatttcccaggttgtaagttagatatcctcc--tgtgtgcgccctgagccc--tgtatatccccatcatcacagtcgctccttgccttgtcattgcttgtttgc-ttttatgtttctcccattggacaacatat--tccttcaagccaga-ga------ttttcccccatcatattatcctcagaacTCAATATGGTGCATGTT---GTCATATTAAAA-CTTGATAAATAAAACA-TACATAAGTAAAGGAAAATTATTCTTCTATACTAGAGAACACAGTTCCTAGGGAAAGTATGTACTTAGACCACACGACTAAAGCAAgaggtctggggat---cacccatattt------------aaggaatggggaggaacaaaggacataagaaaaaagagaaatgggatagccatgaaagcacgagaacaatgttcagagtattt-atcatggccgtctggg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189598601 716 - 190850796 AAAATCTTCTGAAACGT-AAGTCATGC---TCTTTGAA----GCCTGTCT--GAGTCCTCATGGCT-GTCAGCACG-GAACCAAAGGCTGCGACGCTGCACGCGGCCTCCTTCATCTCAGCAGCCTGATTCTTCAGCATCTTTGTGACCCAGCCTCTCCCATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTACCTGAATTACAGCTCCGCAGATGCGGAGCTCTC--AGTTTGGAATGCCCTCCTGCTCCTCTTGTTATTAGTACGACACATTGGTGATTTTcttcctctgagaagcttcttt-atttcccaag-tatgagtcagat-tcctct--ggtgtgtgccctgaaccc--tggccgtcccca-catcacagcagccctttctcttgcaattgcttgttttc-ttttatgtttctcacattggacagtgtat--tccttaaagacaga-ga------tttttcactgt-atattatcctcagaacttaatac-----atGTTGTCGTCATACTAAGAGCTTGATAAATACAACA-TACATAAGTTAATGAAAATT-TTCTTCTGCATTAGGGAATGCAGTTCCTAGGGAAAGTATGTATTTAGAGCACATGACTAAAGCAAGAAGTCCGGGAAA----AGCCATATtt------------aaggaatggggaggaacaaaagacatcagaaagaagagaaatggagtagccgtcaaggcacaagaacgatgttcagagtgttttatcacggccatctggg i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 983726 721 - 2196201 AAAATCTTCTGAAACATGAAGTCATGCTCTTCTTTGAA----GCCTGTGT--GAATCCTCATGGCC-GTCAGCATGAGAACCGAAGGCTGCAATGGTGCACACAGCGTCCTTCATCTCAGTAGCTTGATGGTTCAGCATCTTTGTGACCCACCCTCTCCTACTGTCCTTGATTCA--GTA--GCTGATCGACGGAACTCTGTAACTGAATTACAGCTCGTCAAATGCGGTGCTCTCTTAGTTTGGAATGCCCTCCTGCTCCTGTTGTTACTAGTATGACACACTGGTGATTTTcttcctatgagaagcttctttaatttcctgag-tatgagttagatgtctgcc--tgtgtgtgccctgaactc--tgtacatcccca-cgtcacaggagctcattgacttgtcattgcttgtttgc-ttttatgtttctcacatgggacagtatat--tccataaagacaga-ga------TTTTTCGCTGTAATATTATCCTCAGAACTTAATAT-----ATGTT---GTCATACTGAGAGCTTGATAAATACAACA-TACATAAGTAAATGAAA--T-TTCTTCTGCATTAGAGAATACAGTTCCTAGGGAAAGCATGTATTTAGAGCACATGACTAAGGCAAGAAGTCTGGGAAG----AGCCATATTT------------AAGGAATggagaggagcaaaagacataagaaagatgagaaatggagtagccgtaaaggcatgagaacaatgttcagagtgtttgatcacggccgtctggg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3378455 722 - 5030052 AAAATCTTGTGAAACATTAAGTCATGCCCTTCTCTGAA----GCCTGTCT--GAAT-CTCATGGCT-GTCAGCATGAGAACCAAAGGCTGCAATGGTGCACACGGCATCCTTCATCTCAGTAGCTTGATTGTTCAGCATCTTTGTGGTCCAGCCTCTCCTATTGTCCTTGATTCA--ATA--GCTGATCTACTGAACTATGTAACTGAATTATAGCTCCTCAAATGCGGAGCTCTCTTAGTTTGGAATGTCGTCCTACTCCTGTTGTTATTAGTATGACACATTGGTGATTTTcttcctctgagaagcttctttaatttcccaag-tatgagttagatatcctcc--tgtgtgtgccctgaaccc--tgtgcatcccca-catcacagcagctcattgccttgtaatagcttgtttgc-ttttatgtttctcacattggacagtatat--tccttaaagacaga-ga------ttttttgctgtaatattatcctcagaacttaatat-----atgtt---gtcatactaagaacttgataaatACAACA-CACATAAGTAAGTGAAACTT-TTCTTCTGCATTAGGGAATACAGTTcctagggaaagtatgtatttagagcatgtgactaaagcaagaagtcttggaag----agccatattt------------aaggaatggagaggaacaaaagacataagaaagaagagaaatgggatagctgcacaggcacgagaacagtgttcagagcgttttatcacggccgtctggg i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16939599 708 - 59632846 -AAACTTTTAAAGAAATTAAGTCATGCCCTCATTTCAA----ACCCATTAG-CAATCTTCACTGCT-CTTAGCATAAGACCCATGGACCACAACATAGCACATAAGTTTCTTCCTCTCCTTAGGTTCAATTTATAACAATTTCTTGACCCAGCCTCTCCCTTTTCTTTTCATTCA--ATATTGCAGATGTACCAAACTC---------ATTATGCCT--TCAAATGTGGTGCTTTCTCAGTTCAGAATGCCTTACTGCCCCTCTTATTTTTATTATTACACACTGTTGATTGtct---tatgagaagttcctctaatttcccaat-tgtaagttagatcccctcc--tatg-gtgccctaaaccaagtgcacttacctaacatagcagtgtctcattgtcctgtaattgcctattgac-ttttatatttccccttttggacaatatgt--accttgaagtgagg-aaattgttttttctcctataattttatacttaggacatggtatagtacatggt----tcataCTAGGAGCTTGAT--------------ATGAATAAAAGAAAATTA---TTACACAGCAGAGAATAAAGTTTCTACAGAAAGTATGTA--------GAATGAAAAGTGCACAaggcctagggga---caccaccatttaatagaggaaggaaggaatagagagg---gaaaaacataagaaaaaagaaaa--ggaaaggccataaagatgtgaggagaacatgcagtgtactcaatcacagtggtccatg i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434270 703 - 2520184 -ATAACTTAAAAAAT-TCAAGTTGTATTCTCATTTGAAACTCATCTCT----GGGTCTTCCTTGCT-CTCAGTGTAAGGTTTTAAGGCCTCAAGGTAGCAGGCAAGGTCCTTCATCTCAGGAGCTTTATTTTTTAACTACTTCCCAA-CAAACTCCTCCTGTTTCCCTTCATTCACCATT--GCCAAAATGCCGAGCTG---------ATTAAAGCTCCTCAAATGTGGTGCTTGCTTAGTTTGGAATGCCCCTC-ACGCCTCCTATTGTTGT-ATCAGACATTGGTAATcctcttcccaggggaagcttttctaa--tcccaaa-tgt--tttggatactttcc---atgtgtgtcctcaccgt-gtgcactcccccggtagagcagcagcctactgtctcataagtacccatttgc-ttttctgtctcccccactggatggtacct--gccttacagccagacgt------tttttttctataattttatccccaaaacacagtacagcacct-ct---accatattgggggtttgattaatataatattacatggatATGTGAAGATTATTCTTATACAGatgagaataaagtccctaggggaag--tgtacagagtacaaacagaacaagttagggggccaggaaggggcaccaatattt------------aaggaatgagaaggag-aaaagttgt--gaagagaaaggaaaggaatggtcataaagacatgaggagaatgcatgaagtg----gtcaagg--------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e micMur3.chr14 17494539 2544 - 93316391 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1111434.000000 s hg38.chr4_KI270789v1_alt 93164 97 + 205944 aaaaacagaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa s panTro5.chr4 192884820 97 + 194502333 aaaaacagaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaatgtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192768656 97 + 195804263 aaaaacagaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaatgtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805072 97 + 4876863 aaaaacagaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112694653 97 + 115148730 aaaaagagaatttcaagaaatgaatgatcagtcatgtcaaatgct-tatgaaagtcaggaataa-tggctgtgaaatgtccaatcaacgtggcaattag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188976604 97 + 190429646 aaaaatacaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919363 97 + 189454096 aaaaatacaatttcatgaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24306982 97 - 25927173 aaaaatacaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340558 93 + 4669795 aaaaatacaatttc----aatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134298867 97 + 135778131 aaaaatacaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctatgaaatgtccaatcaacttggcaattaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2736969 97 - 2847728 aaaaatacaatttcaagaaatgaatgttcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcagcttggcaattaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 866290 97 + 2368649 aaaaatacaatttcaagaaatgaatgatcagtcatgtcaaatgct-tataaaagtcaggaataa-tggctgtgaaatgtccaatcaacttggcaattaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599317 97 - 190850796 aaaaatagaatttcaagacatgaatgatcagtcatgtccagtgcg-tataaaagtcaagaataa-tggctgtgaaacgtccaataaatttggcaattaa i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984447 97 - 2196201 aaaaatagaatttcaagaaatgaatgatcagtcatgtccaatgct-tataaaagtcaagaataa-tggctgtgaaatgtccaataaatttggcaattaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379177 97 - 5030052 aaaaatagaatttcaagaaatgaatgatcagtcatgtcgaatgca-tataaaagtcaagaacaa-tggctgtgaaatgtccaataaatttggcaattaa i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17497083 97 - 93316391 aaaaacagaatttgaagaagtgaatgatcagtcatgtcaaatgca-tattaaagtcaagaatca-tgactgtgaaatgtccagtacatgtggcagttaa i micMur3.chr14 I 2544 C 0 s canFam3.chr16 16940307 95 - 59632846 aaaaatagaaatttgagaaatggatgatcaatactgtcaaatgga-tataaaagtcaagaataa-taacta--aaatggccaatagatttagcaatgaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1434973 97 - 2520184 aaggatagaatttcaagaaacgagtgatcaataatgtcaaatgcagtataaaaa-caagaatagttgactgcaaagtgtccagtagatttag-GATTAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e mm10.chr8 86570925 3352 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=570325.000000 s hg38.chr4_KI270789v1_alt 93261 48 + 205944 aaatacactgatgactttatgaagcagtttcagtatgttggttgagac s panTro5.chr4 192884917 48 + 194502333 aaatacactgatgactttatgaagcagtttcagtatgttggttgagac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192768753 48 + 195804263 aaatacactgatgactttatgaagcagtttcagtatgttggttgagac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805169 48 + 4876863 aaatacactgatgactttatgaagcagtttcagtatgttggttgagac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112694750 48 + 115148730 aaatacactgatgactttatgaagcagtttcagtatgttggttgagac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188976701 48 + 190429646 aaacacactgatgactttatgaagcagtttcagtatactggtggcgac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919460 48 + 189454096 aaacacactgatgactttatgaagcagtttcagtatattggtggcgac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307079 48 - 25927173 aaacacactgatgactttatgaagcagtttcagtatattggtggcgac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340651 48 + 4669795 aaacacactgatgactttatgaagcagtttcagtatattggtggcaac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134298964 48 + 135778131 aaacacactgatgactttatgaagcagtttcagtatattggtggagac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2737066 48 - 2847728 aaacacactgatgactttatgaagcagtttcagtatattggtggcgac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 866387 48 + 2368649 aaacacactgatgactttatgaagcagtttcagtatattggtggagac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599414 48 - 190850796 aaatacactgatgactttatgaagcagtttcagtatgttggtgcagat i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984544 48 - 2196201 aaatacactgatgactttatgaagcagttttggtatgttggtgcagac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379274 48 - 5030052 aaatacactgatgactttatgaagcagtttcagtatgttggtgcagac i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17497180 48 - 93316391 aacgacattgatgactttatgaagcagtttcagtgtattggtggagac i micMur3.chr14 C 0 C 0 s mm10.chr8 86574277 47 - 129401213 AAAGACAGTGATGACTTTATGAAGCAACTTCA-CAAATTATTGGATAC i mm10.chr8 I 3352 C 0 s canFam3.chr16 16940402 48 - 59632846 aaagacactgatgactttatagagcagtttcagtatattcatggatct i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435070 42 - 2520184 AAAGACATTAATgg------gaagcagatgtggctcatgggataaggc i dasNov3.JH570353 C 0 I 78 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1520873.000000 s hg38.chr4_KI270789v1_alt 93309 169 + 205944 agaagccagatgatggggtgCTGCATAATAAATGGCACATCGCAGG-CTGATGACAGCACAGCCCTGCTTTAATACGGCAGGAAACACGATGGGTTCTGTGGCATCCTCCTACTCACTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGACAGATGTTTAATTTCCTGAG s panTro5.chr4 192884965 169 + 194502333 agaagccagatgatggggtgCTGCATAATAAATGGCACATCGCAGG-TTGATGACAGCACAGCCCTGCTTTGATACGGCAGGAAACACGATGGGTTCTGTGGCATCCTCCTACTCACTGTCTTCTGTG-GATTGTGACTTCTGGTGACTGACAGATGTTTAATTTCCTGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192768801 169 + 195804263 agaagccagatgatggggtgCTGCATAATAAATGGCACATCGCGGG-TTGATGACAGCACAGCCCTGCTTTGATACGGCAGGAAACACGATGGGTTCTGTGGCATCCTCCTACTCACTGTCTTCTGTG-GATTGTGACTTCTGGTGACTGACAGATGTTTAATTTCCTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805217 169 + 4876863 agaagccagatgatggggtgCTGCATAATAAATGGCACATCGCGGG-TTGATGACAGCACAGCCCTGCTTTAATACGGCAGGAAACACGATGGGTTCTGTGGCATCCTCCTACTCACTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGACAGATGTTTAATTTCCTGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112694798 169 + 115148730 agaagccagatgatggggtgCTGCATAATGAATGGCACATCACGGG-GTGATGACAGCACAGCTGTGCTTTAATATGGCAGGAAACACGATGCGTTCTGTGGCATCCTCCTACTCACTCTCTTCTGTG-GATTGTGACTCCTGGTGACTGACAGATGTTTAATTTCTTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188976749 169 + 190429646 agaagccagatgatggggtgCCGTGTAATCAGTGGCACACCACGGC-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCGTCCTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGATGGATGTTTAATTTCCTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919508 169 + 189454096 agaagccagatgatggggtgCCGTGTAATCAGTGGCACACCACGGC-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCGTCCTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGATGGATGTTTAATTTCCTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307127 169 - 25927173 agaagccagatgatggggtgCCGTGTAATCAGTGGCACACCACGGC-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCGTCCTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGATGGATGTTTAATTTCCTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340699 169 + 4669795 agaagccagatgatggggtgCCGTGTAATCAGTGGCACACCACAGG-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCGTCCTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTAACTGATGGATGTTTAATTTCCTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299012 169 + 135778131 agaagccagatgatggggtgCCGTGTAATCAATGGCACACCGCGGG-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCATCCTCCTACTCACTGTCTTCTGTG-GATTGTGCCTCCTGGTGACTGATGGATGTTTAATTTCCTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2737114 169 - 2847728 agaagccagatgatggggtgCCGTGTAATCAGTGGCACACCACGGG-TTGATGACAGCACAGCCCTGCTTTAACACGGCAGGAAACACGATGCGTTCTGTGGCGTCCTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTAACTGATGGATGTTTAATTTCCTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 866435 168 + 2368649 agaagccagatgatggggtgCTGTGTACTCAGTGGCACACCGCGGG-TTGATGACAGCACAG-CCTGCTTTAACACGGCAGGAAACATGATGCGTTCTGTGGCATCGTCCTACTCGCTGTCTTCTGTG-GATTGTGACTCCTGGTGACTGATGGATGTTTAATTTCCTGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599462 157 - 190850796 -----------gagaCGGCGCGGTGTTGTAAGTGGAAGAGCGCAGC--TGATGACAATGCAGCCCTGCTCTGACACGGCAGGAAACACGATGTGTTCTGGGGCACCCTCCTGCCCTCTGTCTTCTGTG-GCCTGTGACGCCTGGTAACTGACGGATGTTTAATTTCCTGAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984592 145 - 2196201 ag---------aagccAGC-------------TGAGACAGTGCAGCATTGATGCCAACGCAGCCCTGCTCTAACACGGC-GGAAACACG-TGTGTTCT-GGGCACCCTCCTGCTCACTGTCTTCTGTG-GCTTGTGACGCCTGGTAACTGACGGATGTTTAATTTCCTGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379322 168 - 5030052 agaagccagatgagaCAGTGCAGCATTGTCAGTGGAAGAACGGGGT--TGATGACAATGCAGCCCTGCTCTAACACAGCAGGAAACACGATGTGTTCTGGGGCACCCTCCTTCTCGCTGTCTTCTGTG-GCTTGTGACGACTGGTAACTGACAGATGTTTAATTTCCTGAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17497228 166 - 93316391 aaaagccagaAGACGGAGTGCTGCACAGTAAACAGAACGTCACAGG-CTGATGACAGCCCAGCTCTGCTTTGATACAGCAGGAAGTGTTACGAGTTCTGTG---TCCTCCTGCCCACTGTCTTCTGTG-GGTGGCGAATCCTGGTAACTAGTGGAAGTTTAATTTCCTGAA i micMur3.chr14 C 0 C 0 s mm10.chr8 86574324 133 - 129401213 CAACGTCAAATGATG-AGCGTTACATAATAAATAGGACATAACAGT---------------------------------AGGAAACAGCATGC--TCAGTATAATCATCTTTC-CACTGTCTTTTGGG-ATTGGCAAATACTAGTAACCAGGAGTTATTTAATTTCCTGAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16940450 128 - 59632846 ggaagc--------------------------------------AT-TTGATGACAGCACAGCTTTGCTGTAACACAGCAGGAAATGTTTTGTATCC----ATGTTATTCTACTCACTGCCTTCTATGAGATGGTGAACTCTGGTAACTAATGGATGTTTAATTCTCTGAG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e dasNov3.JH570353 1435112 78 - 2520184 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=232580.000000 s hg38.chr4_KI270789v1_alt 93478 36 + 205944 GGCAAGCAAAGT-----CACGGC-TTTAATATGCCCGAGAAT s panTro5.chr4 192885134 36 + 194502333 GGCAAGCAAAGT-----CACGGC-TTTAATATGCCCGAGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192768970 36 + 195804263 GGCAAGCAAAGT-----CACGGC-TTTAATATGCCCGAGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805386 36 + 4876863 GGCAAGCAAAGT-----CACGCC-TTTAATATGCCCGAGAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112694967 36 + 115148730 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCCGAGAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188976918 36 + 190429646 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919677 36 + 189454096 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307296 36 - 25927173 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340868 36 + 4669795 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299181 36 + 135778131 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2737283 36 - 2847728 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 866603 36 + 2368649 GGCAAGCAAAGT-----CATGGC-TTTAATATGCCTGAGAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599619 22 - 190850796 GGC-------------------T-CATAATATACCTGAGAAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984737 22 - 2196201 GGC-------------------T-TGTAATATACCTGAGAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379490 22 - 5030052 GGC-------------------T-TGTAATATACCTGAGAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17497394 33 - 93316391 TGC----AAAGT-----CATGGCTTTTCAGACACCTGAAAAC i micMur3.chr14 C 0 C 0 s mm10.chr8 86574457 31 - 129401213 TAC----AAAGT-----CATGGC-TTTTA-ATAAATATGAAT i mm10.chr8 C 0 I 1 s canFam3.chr16 16940578 22 - 59632846 TAC----GAGGT-----CATGAC-----------CTGAAAAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435190 41 - 2520184 ggcaagccaggtgcccacacaag-tgAGTCATGCGGCAGGAT i dasNov3.JH570353 I 78 C 0 e proCoq1.NW_012145301v1 3916928 20680 + 3993831 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=775544.000000 s hg38.chr4_KI270789v1_alt 93514 64 + 205944 AATGATGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGAGAA--------------AGGAAGAGGTGTAGA-- s panTro5.chr4 192885170 64 + 194502333 AATGATGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGAGAA--------------AGGAACAGGTATAGA-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769006 64 + 195804263 AATGATGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGAGAA--------------AGGAACAGGTATAGA-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805422 64 + 4876863 AATGATGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGCGAA--------------AGGAACAGGTGTAGA-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695003 64 + 115148730 AATGATGGATGGTGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGAGAA--------------AGGAACAGGTGTAGA-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188976954 64 + 190429646 AATGAGGGATGACGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919713 64 + 189454096 AATGAGGGATGACGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307332 64 - 25927173 AATGAGGGATGACGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340904 64 + 4669795 CATGAGGGATGACGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299217 64 + 135778131 AATGAGGGATGACGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2737319 64 - 2847728 CATGAGGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACGAGAGAA--------------AGGAACAGGTGTAGA-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 866639 64 + 2368649 AATGAGGGATGATGCAACTTTGGATAAG-----CCTGTAGAAGAGACAAGAGAA--------------AGGAACAGGTGTAGA-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599641 64 - 190850796 AATGATGGATGATGCAAATTTGGATACG-----CTTGTAGAAGAGACTAGAGAA--------------AGGAAGAGATGTAGA-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984759 64 - 2196201 AATGATGGATGATGCAAATTTGGATAAG-----CTTGTAGAAGAGACAAGAGAA--------------AGGAAGGGATGTGGA-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379512 64 - 5030052 AATGATGGATGATGCAAATTTGGATACA-----CTTGTAGAAGAGACAAGAGAA--------------AGGAAGAGATGTAGA-- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17497427 64 - 93316391 AATGACGAATGAAGCAAATTTGGTTAAG-----CCAGTAGAAGAGACGGGAGAA--------------GGGAAGAGGTGTAGA-- i micMur3.chr14 C 0 I 656 s proCoq1.NW_012145301v1 3937608 64 + 3993831 AATGATGAATGAAGGAAATTTGGTTAAG-----CCGGTAGAAGAGATGAGAGAA--------------GGGAAGAGGTGTAGA-- i proCoq1.NW_012145301v1 I 20680 I 808 s mm10.chr8 86574489 69 - 129401213 TATTTTGAGTGATGCAAATTGGAATAGGAGAGACCAATCTAAGTGAGATCATAG--------------AAGAACAGAGATAGA-- i mm10.chr8 I 1 I 2 s canFam3.chr16 16940600 64 - 59632846 AATGATGGATGATGCAAATTTAGATGAG-----CCTGCAGAAGAGACAAGAGAA--------------AGGAAGAGAGTTGGA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435231 73 - 2520184 -------GGTGACGCAACAGAGGAGGGA-----CAAAGGGGAGAGTCAAGGTGAGGCCAGTGGAGACCAGGAACTGAGGTGGTGA i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=80412.000000 s hg38.chr4_KI270789v1_alt 93578 8 + 205944 AAAGCTCT-- s panTro5.chr4 192885234 8 + 194502333 AAAGCTCT-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769070 8 + 195804263 AAAGCTCT-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805486 8 + 4876863 AAAGCTCT-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695067 8 + 115148730 AAAGCTCT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977018 8 + 190429646 AAAGCTCT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919777 8 + 189454096 AAAGCTCT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307396 8 - 25927173 AAAGCTCT-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340968 8 + 4669795 AAAGCTCT-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299281 8 + 135778131 AAAGCTCT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2737383 8 - 2847728 AAAGCTCT-- i manLeu1.NW_012102221v1 C 0 I 7342 s colAng1.NW_012116221v1 866703 8 + 2368649 AAAGCTCT-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599705 8 - 190850796 AAGGCTCT-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984823 8 - 2196201 AAAGCTCT-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379576 8 - 5030052 AAAGCTCT-- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86574560 7 - 129401213 -AAACTCT-- i mm10.chr8 I 2 C 0 s canFam3.chr16 16940664 8 - 59632846 AAAACTAT-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435304 8 - 2520184 --AATTGGCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=44759.000000 s hg38.chr4_KI270789v1_alt 93586 4 + 205944 GAAG s panTro5.chr4 192885242 4 + 194502333 GAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769078 4 + 195804263 GAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805494 4 + 4876863 GAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695075 4 + 115148730 GAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977026 4 + 190429646 GAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919785 4 + 189454096 GAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307404 4 - 25927173 GAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340976 4 + 4669795 GAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299289 4 + 135778131 GGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 866711 4 + 2368649 GAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599713 4 - 190850796 GAAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984831 4 - 2196201 GAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379584 4 - 5030052 GAAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86574567 4 - 129401213 AGAG i mm10.chr8 C 0 I 568 s canFam3.chr16 16940672 4 - 59632846 GGAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435312 4 - 2520184 GAAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2737391 7342 - 2847728 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 93590 1 + 205944 G s panTro5.chr4 192885246 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769082 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805498 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695079 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977030 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919789 1 + 189454096 G i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134299293 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 866715 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599717 1 - 190850796 G i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 984835 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3379588 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16940676 1 - 59632846 G i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1435316 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2737391 7342 - 2847728 I e cerAty1.NW_012001672v1 3340980 0 + 4669795 C e macNem1.NW_012013133v1 24307408 0 - 25927173 C e otoGar3.GL873580 11224384 42 - 11315646 I a score=1630482.000000 s hg38.chr4_KI270789v1_alt 93591 288 + 205944 G--------------------------------------GTctgggcgcagtggctcatgcatgtaatcctagcactttgggaggtcgaggc--gggcagatag--tgaggtcaggagttc-------gagaccagactgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------tgggcgtggtg-gcgggcacctgcaatccc---agctactcgggaggctg-aggcaggagaatcacttgaacccggga-ggcagaagttgccgtgagctgagatggtgcca-----ctgcact----------------------------ccagc-------------ctgggtgat-agagcgagactctgtcaaaaaaaa------a s panTro5.chr4 192885247 281 + 194502333 G--------------------------------------GTctgggcgcagtggctcatgcatgtaatcccagcactttgggaggtggaggc--gggcagatag--tgaggtcaggagttc-------gagaccagactgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------tgggcgtggtg-gcgggcacctgcaatccc---agctactcgggaggctg-aggcaggagaatcacttgaacccggga-ggcagaagttgccgtgagctgagatggtgcca-----ctgcact----------------------------ccagc-------------ctgggtgac-agagtgagactctatc-------a------a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769083 281 + 195804263 G--------------------------------------GTctgggcgcagtggctcatgcatgtaatcccagcactttgggaggtggaggc--gggcagatag--tgaggtcaggagttc-------gagaccagactgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------tgggcgtggtg-gcgggcacctgcaatccc---agctactcgggaggctg-aggcaggagaatcacttgaacccggga-ggcagaagttgccgtgagctgagatggtgcca-----ctgcact----------------------------ccagc-------------ctgggtgac-agagtgagactctatc-------a------a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805499 280 + 4876863 G--------------------------------------GTctgggcgcagtggctcatgcatgtaatcccagcactttgggaggtcgaggc--gggcagatag--tgaggtcaggagttc-------gagaccagactgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------tgggcgtggtg-gcgggcacctgcaatccc---agctactcgggaggctg-aggcaggagaatcacttgaacccggga-ggcagaagttgccgtgagctgacatggtgcca-----ctgcact----------------------------ccagc-------------ctgggtgac-agagcgagactctgtc--------------a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695080 271 + 115148730 G--------------------------------------ggctgggcgcagtggctcatgcgtgtaatcctagcactttgggaggtcggagtgggggcagatag--tgaggtcagcagttc-------gagaccagcctgaccgacatggtgaaaccccatctct--actaaaaatacaaa-aattagc-------------------cgggcacctgcaatccc---agctactcgggaggctg-aggcaggagaatcacttgaacccagga-ggtggaggttgctgtgagctgagatggcgcca-----ctgcact----------------------------ccagc-------------ctgggtgac-agagcgagactctgtG-------A------a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977031 281 + 190429646 G--------------------------------------ggccgggcatggtggctcatgcctgtaatcctagcactttgggaggtcgaggt--gggtggatag--tgaggtcaggagttc-------gagaccagcctgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------cgggcatgttg-gcacgcacctgtaatccc---agctactggggaggttg-aggcaggagaattgcctgaacctggga-agcaaaggttgctgtgaactgagatggcacca-----ccgcact----------------------------ccagc-------------ctgggtgac-agagcgagactttgtc-------t------a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187919790 281 + 189454096 G--------------------------------------ggccgggcatggtggctcatgcctgtaatcctagcactttgggaggtcgaggt--gggtggatag--tgaggtcaggagttc-------gagaccagcctgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------cgggcatgttg-gcacgcacctgtaatccc---agctactggggaggttg-aggcaggagaattgcctgaacctggga-agcaaaggttgctgtgaactgagatggcacca-----ccgcact----------------------------ccagc-------------ctgggtgac-agagcgagactttgtc-------t------a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307408 232 - 25927173 ----------------------------------------------------------------------------------------------GGGTGGATAG--tgaggtcaggagttc-------gagaccagcctgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------cggacatggtg-gcacgcacctgtaatccc---agctactggggaggttg-aggcaggagaattgcctgaacctggga-ggcaaaggttgctgtgaactgagatggcacca-----ccgcact----------------------------ccagc-------------ctgggtgac-agagcgagactttgtc-------t-aaaaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3340980 232 + 4669795 ----------------------------------------------------------------------------------------------GGGTGGATAG--tgaggtcaggagttc-------gagaccagcctgaccaatatggtgaaaccccatctct--actaaaaatacaaa-aattagc------ctggcatggtg-gcacgcacctgtaatccc---agctactggggaggttg-aggtaggagaattgcctgaacctggga-ggcaaaggttgctgtgaactgagatggcacca-----ccgcact----------------------------ccagc-------------ctgggtgac-agagcgagactttgtc-------t-aaaaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299294 281 + 135778131 G--------------------------------------ggctgggcatggtggctcatgcctgtaatcctagcactttgggaggtcaaggt--gggtggatag--tgaggtcaggagttc-------gagaccagcctgaccaacatggtgaaaccccatctct--actaaaagtacaaa-aattagc------cgggcatggtg-gcacgcacctgtaatccc---agctactggggaggttg-aggcaggagaattgcctgaacctggga-ggcaaaggttgctgtgaactgagatggcacca-----ccgcact----------------------------ccagc-------------ctggatgac-agagcgagactttgtc-------t------a i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 866716 281 + 2368649 G--------------------------------------ggctgggcacggtggctcatgcgtgtaatcctagcactttgggaggtcgaggt--gggtggatag--tgaggtcaggagttt-------gagaccagcctgaccaacatggtgaaaccccatctct--actaaaaatacaaa-aattagc------cgggcatggtg-gcacgcacctgtaatccc---agctactcgggaggttg-aggcaggagaattgcctgaacctggga-ggcaaatgttgctatgaactgagatggcgcca-----ccgcact----------------------------ccagc-------------ctgggtgac-agagcgagactttgtc-------t------a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599718 329 - 190850796 GAAAATTCTTGAGTGTGTGATGTTTGAAAGACTAGACGAggccaggcacgatggctcatgcctgtaatcccagcactttgggaggccaaggc--gggcagatcatctgaggttggtagttt-------gagaccagcctgaccaacatggagaaaccctgtctct--actaaaaatacaaacaattagc------tgggcgtggtg-atgcttacctgtaatctc---agctactcgggaggctg-aggcaggagaattgcttgaacctggga-ggtggagtttgtgatgaggcgggattgcacca-----ttgcact----------------------------ccagc-------------ctgggcaacaagagtgaaactctgtc-------tcgaaaga i calJac3.chr3 C 0 I 586 s cebCap1.NW_016107886v1 984836 329 - 2196201 GAGAATTGTTGAATGTGTGATGTTTGAAagactagactaagccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggc--gagcagaccacctgaggtcgggagttc-------aagaccagcctgaccaacatggagaaaccccatctct--actaaaattacaaaaaattagc------caggcatgatg-gtgcatccctgtaatcgc---agctactcgggaggctg-aggcaggagaatcgcttgaacctggga-ggtggagtttgcagtgaggcgggattgtgcca-----ttgcact----------------------------ccacc-------------ctgggcaacaagagtgaaactctgtc-------tcaaaaaa i cebCap1.NW_016107886v1 C 0 I 11 s aotNan1.NW_018492112v1 3379589 326 - 5030052 GAGAATTGTTGAATGTGTGATGTTTGAAAGACTAGACGAggccgggagcggtggctcatgcctgtaatcccagcactttgggaggccaaggt--gggcagatcacatgaggtcgggagttc-------aagaccagcctgaccaacatggagaaaacccgactct--actaa---tacaaacaattagc------caggtgtggtg-atgcatgcctgtaatcgc---agctactcgggaggctg-aggcaggagaatcgcttgaacctggga-ggtggagtttgtgatgaggcgggattgcgcca-----ttgcact----------------------------ccaat-------------ctgggcaacaagagtgaaactctgtc-------tcaaaaaa i aotNan1.NW_018492112v1 C 0 I 1 s dasNov3.JH570353 1435317 322 - 2520184 -------------------------------------agaagtagatacggaggatcacgc----------------------agcaaacag--atgcagatgg--caaggacagcagggcagggggagggaggagaagggggaagaagaaagaaataaatcttTTAAAGAAAAAAAAAGA-CATTGGTGACTTTTGAGAGCAGTGCCCAGACATTGGTGGACCCCGGAGCAGCTGAGGAGGCTGCCGACAAAGGGAATGGAGGGACAGAGGACAGCACAG--TACAGTCCGTTCAGCAGGTGCCGTCCTCCCGCTCTGCCTTCTGTGGGTGCTGTATCCTGGTAGCCGGCAGATATTTAATTTCTGAGTGCC-AAGTCAAGGCTCTAT---------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e canFam3.chr16 16940677 2 - 59632846 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2737391 7342 - 2847728 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=1949.000000 s hg38.chr4_KI270789v1_alt 93879 15 + 205944 ----------aaaaaaaaaaaaaaa s panTro5.chr4 192885528 15 + 194502333 ----------aaaaagaaaaaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769364 15 + 195804263 ----------aaaaagaaaaaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805779 15 + 4876863 ----------aaaaaaaaaaaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695351 5 + 115148730 ----------aaaga---------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977312 7 + 190429646 ----------aaagaaa-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920071 7 + 189454096 ----------aaagaaa-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307640 7 - 25927173 ----------aaagaaa-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341212 7 + 4669795 ----------aaagaaa-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299575 7 + 135778131 ----------aaagaaa-------- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 866997 7 + 2368649 ----------aaagaaa-------- i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 985176 5 - 2196201 ----------aaaaa---------- i cebCap1.NW_016107886v1 I 11 C 0 s aotNan1.NW_018492112v1 3379916 5 - 5030052 ----------aaaaa---------- i aotNan1.NW_018492112v1 I 1 C 0 s dasNov3.JH570353 1435639 15 - 2520184 AATATACCTGAAAAT---------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189600047 586 - 190850796 I e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e canFam3.chr16 16940677 2 - 59632846 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2737391 7342 - 2847728 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=-1747.000000 s hg38.chr4_KI270789v1_alt 93894 26 + 205944 aagaaagaaagaaagaaa---------------aagaaaag s panTro5.chr4 192885543 11 + 194502333 aagaaagaaag------------------------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769379 11 + 195804263 agaaagaaaag------------------------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805794 22 + 4876863 aagaaagaaagaaagaaa---------------aaga---- i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189600633 26 - 190850796 agggaggaaggaaggaag---------------gaaggaag i calJac3.chr3 I 586 C 0 s dasNov3.JH570353 1435654 40 - 2520184 AATAAAGAATGAATGAAATTTGGGTTAGCCTGTAGAAGAA- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 985181 0 - 2196201 C e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e canFam3.chr16 16940677 2 - 59632846 I e mm10.chr8 86574571 568 - 129401213 I e aotNan1.NW_018492112v1 3379921 0 - 5030052 C e saiBol1.JH378165 13087857 3140 - 14256875 M e colAng1.NW_012116221v1 867004 0 + 2368649 C e manLeu1.NW_012102221v1 2737391 7342 - 2847728 I e chlSab2.chr7 134299582 0 + 135778131 C e cerAty1.NW_012001672v1 3341219 0 + 4669795 C e macNem1.NW_012013133v1 24307647 0 - 25927173 C e macFas5.chr5 187920078 0 + 189454096 C e rheMac8.chr5 188977319 0 + 190429646 C e nomLeu3.chr7b 112695356 0 + 115148730 C e otoGar3.GL873580 11224384 42 - 11315646 I a score=8590.000000 s hg38.chr4_KI270789v1_alt 93920 20 + 205944 aaaagaaaagaaaacagaaa s panTro5.chr4 192885554 19 + 194502333 -aaagaaaagaaaacagaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769390 19 + 195804263 -aaAGAAAAGAAAACAGAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805816 19 + 4876863 -aaagaaaagaaaacagaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695356 17 + 115148730 -aaagaaaagaaa--agaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977319 5 + 190429646 ---------------agaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920078 5 + 189454096 ---------------agaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307647 5 - 25927173 ---------------agaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341219 5 + 4669795 ---------------agaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299582 5 + 135778131 ---------------agaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2744733 18 - 2847728 --AAAAGAAAAGAAAAGAAA i manLeu1.NW_012102221v1 I 7342 C 0 s colAng1.NW_012116221v1 867004 5 + 2368649 ---------------agaaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189600659 16 - 190850796 ----gaaaggaaggaagaaa i calJac3.chr3 C 0 T 968 s cebCap1.NW_016107886v1 985181 10 - 2196201 ----------tagaaagaca i cebCap1.NW_016107886v1 C 0 I 2 s aotNan1.NW_018492112v1 3379921 8 - 5030052 ------------gaaagaaa i aotNan1.NW_018492112v1 C 0 I 2 s dasNov3.JH570353 1435694 20 - 2520184 CAAGAGAAGGGACATGGAAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e canFam3.chr16 16940677 2 - 59632846 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=86047.000000 s hg38.chr4_KI270789v1_alt 93940 11 + 205944 agCTCTGAAGG s panTro5.chr4 192885573 11 + 194502333 agCTCTGAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769409 11 + 195804263 AGCTCTGAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805835 11 + 4876863 aGCTCTGAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695373 11 + 115148730 agCTCTGAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977324 11 + 190429646 aGCTCTGAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920083 11 + 189454096 aGCTCTGAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307652 11 - 25927173 aGCTCTGAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341224 11 + 4669795 aGCTCTCAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299587 11 + 135778131 aGCTCTGAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2744751 11 - 2847728 AGCTCTGAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 867009 11 + 2368649 aGCTCTGAAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599707 11 - 190850796 GGCTCTGAAGG i calJac3.chr3 T 968 C 0 s dasNov3.JH570353 1435714 11 - 2520184 AGATCTGCAGG i dasNov3.JH570353 C 0 I 2 e cebCap1.NW_016107886v1 985191 2 - 2196201 I e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e canFam3.chr16 16940677 2 - 59632846 I e mm10.chr8 86574571 568 - 129401213 I e aotNan1.NW_018492112v1 3379929 2 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=202326.000000 s hg38.chr4_KI270789v1_alt 93951 25 + 205944 GAGAATTCTTGA-GTGTGTGATGTTT s panTro5.chr4 192885584 25 + 194502333 GAGAATTCTTGA-GTGTGTGATGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769420 25 + 195804263 GAGAATTCTTGA-GTGTGTGATGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805846 25 + 4876863 GAGAATTCTTGA-GTGTGTGATGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695384 25 + 115148730 GAGAATTCTTGA-GTGTGTGATGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977335 25 + 190429646 GAGAATTCTTGA-GTGTGTGATGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920094 25 + 189454096 GAGAATTCTTGA-GTGTGTGATGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307663 25 - 25927173 GAGAATTCTTGA-GTGTGTAATGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341235 25 + 4669795 GAGAATTCTTGA-GTGTGTGATGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299598 25 + 135778131 GAGAATTCTTGA-GTGTGTGATGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2744762 25 - 2847728 GAGAATTCTTGA-GTGTGTGATGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 867020 25 + 2368649 GAGAATTCTTGA-GTGTGTGATATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189599718 25 - 190850796 GAAAATTCTTGA-GTGTGTGATGTTT i calJac3.chr3 C 0 I 936 s canFam3.chr16 16940679 26 - 59632846 GAGAGTTCTCAACGTGAAGGAAGCTT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1435727 25 - 2520184 GAGAATTTCCAA-GCGAGGGAGGTTT i dasNov3.JH570353 I 2 C 0 e cebCap1.NW_016107886v1 985191 2 - 2196201 I e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e aotNan1.NW_018492112v1 3379929 2 - 5030052 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=5264060.000000 s hg38.chr4_KI270789v1_alt 93976 629 + 205944 GAAATACTAGACTAAAGGGCAGTTCAGTGGGACAGTGGGTGGAA-TTTGCAGTGGATAC--CAGAACAGAGTTTGGGAAGAGAGATTT-----ggccaagagactacaccctgcagatctccactgacaga-ggagttagtgaccaagagcctggccactgagc--taaaatccatcgtgcacttgtgctgtaaccacat-tcccatgggctgctctccagccaatgactgaattggaagcag--------ggatg----------cctgtcctgggagccatgag-ctcctctgatgcctgaggttgactcgtggac-ttccagtagctttgctgaaccttccatagactggaaagcagcctaagatgttttctcgcagacccctctggctccttcaccgttttcctt----ttgcagtagttttcttaataacatccttgcatgtgtaatcctgtgcttatatcagcttctcagagggtccagaccgatataATATCTAAAGGGTAGTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTATTAGTGTTGTACCCTTCTATCATTCGCTATCATTCATGTTTCTTTAAGATATATTCGGTAAAATACCCATTTCTCACTAATGCTGGTTAGAGTAGGTC----------------tt-tttttt------------------tttttttgagacgtaa s panTro5.chr4 192885609 642 + 194502333 GAAATACTAGACTAAAGGGCAGTTCAGTGGGACAGTGGGTGGAA-TTTGCGGTGGATAC--CAGAACAGAGTTTGGGAAGAGAGATTT-----ggccaagagactacaccctgcagatctccactgac--a-ggagttactgaccaagagcctggccactgagc--tgaaatccatcgtgcacttgtgctataaccacat-tcccatgggctgctctccagccaatgactgaattggaagcag--------ggatg----------cctgtcctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ttccagtagctttgctgaaccttccatagactggaaagcagcctaagatgttttctcgcagacccctctggctccttcaccg-tttcctt----ttacagtagttttcttaataacatccttgcatgtttaatcctgtgctgatatcagcttctcagagggtccagacCGATATAATATCTAATGGGTAGTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTATTAGTGTTGTACCCTTCTATCACTCACTGTCATTCATGTTTCTTTAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGGTTAGAGTAGGTCtttttttttttttttttt-tttttt------------------tttttttgagacatag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192769445 630 + 195804263 GAAAT-----ACTAAAGGGCAGTTCAGTGGGACAGTGGGTGGAA-TTTGCGGTGGATAC--CAGAACAGAGTTTGGGAAGAGAGATTT-----ggccaagagactacaccctgcagatctccactgac--a-ggagttactgaccaagagcctggccactgagc--tgaaatccatcgtgcacttgtgctgtaaccacat-tcccatgggctgctctccagccaatgactgaattggaagcag--------ggatg----------cctgtcctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ttccagtagctttgctgaaccttccatagactggaaagcagcctaagatgttttctcgcagacccctctggctccttcaccg-tttcctt----ttacagTAGTTTTCTTAATAACATCCTTGCATGTTTAATCCTGTGCTGATATCAGCTTCTCAAAGGGTCCAGACCGATATAATATCTAATGGGTAGTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTATTAGTGTTGTACCCTTCTATCATTCACTGTCATTCATGTTTCTTTAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGGTTAGAGTAGGTC-------ttttttttttt-tttttt------------------tttttgtgagacatag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3805871 627 + 4876863 GAAATACTGGACTAAAGGGCAGTTCAGTGGGACAGTGGGTGGAA-TTTGCATTGGATAC--CAGAACAGAGTTTGGGAAGAGAGATTT-----ggccaagagactacaccctgtagatctccactgacaga-ggagttagtgaccaagagcctggccactgagc--tgaaatccatcgtgcacttgtgctgtaaccacat-tcccatgggctgctctccagccaatgactgaattggaagcag--------ggatg----------cctgtcctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ttccagtagctttgctgaaccttccatagactggaaagcagcctaagatgttttctcgcagacccctctggctccttcaccg-tttcctt----ttacagtagttttcttaataacatccttgcatgtttaatcctgtgctgatatcagcttctcagagggtccagacCGATATAATATCTAATGGGTAGTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTATTAGTGTTGTACCCTTCTATCATTCACTATCATTCATGTTTCTTTAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGGTTAGAGTAGGTC-----------------t-tttttt------------------tttttttgagacatag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112695409 628 + 115148730 GAAAGACTAGACTAAAGGGCAGTTCAGTGGGACAGTGGGTGGAA-TTTGCAGTGGATAC--CAGAACAGAGTTTGGGAAGAGAGATTT-----ggccaagagactgcaccctgcagatctccactgacaga-ggagttagtgaccaagagcctggctactgagc--tgaaatccatcgttcacttgtgctgtaaccacat-tcccatgggctgctctccagccaatgactgaggtggaagcag--------ggatg----------cctgtcctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ttctagtaactttgctgaaccttccatagagtggaaagcagcctaagatgttttctcgcagactcctctggctccttcacca-tttcttt----ttacagtagtTTTCTTAATAACATCCTTGCATGTTTAATCCTGTGCTGATATCAGCTTCTGAGAGGGTCCAGACCGATATAATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTGTTAGTGTTCTACCCTT----------CTGTCATTCATGTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGTTTAGAGTACGTC------ttcttttttttt-tttttt------------------tttttttgagacatag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977360 623 + 190429646 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccaagagcctggccattgagc--tgaaatctaccatgcatttgggctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctgtgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTACTGTGTTGTTAGTATTGTACCCTT----------CTATCACAC--GTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGTTTGGAGTAGGTC------TTCGtttttttt-cttttt------------------ttgcggggggagatag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920119 623 + 189454096 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccaagagcctggccattgagc--tgaaatctaccatgcatttgggctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctgtgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTACTGTGTTGTTAGTATTGTACCCTT----------CTATCACAC--GTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGTTTGGAGTAGGTC------TTCGtttttttt-cttttt------------------ttgcggggggagatag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24307688 623 - 25927173 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccaagagcctggccattgagc--tgaaatctaccatgcatttgggctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctgtgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTACTGTGTTGTTAGTATTGTACCCTT----------CTATCACAC--GTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGTTTGGAGTAGGTC------TTCGtttttttt-cttttt------------------ttgcggggggagatag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341260 623 + 4669795 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTAGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccgagagcctggccattgagc--tgaaatccaccgtgcatttgggctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcatgggc-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctctgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTGTTAGTATTGTACCCTT----------CTATCACAC--GTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTAATGCTGTTTGGAGTAGGTC------TTCGtttttttt-cttttt------------------ttgtggggggagatag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134299623 628 + 135778131 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATACTGCAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccaagagcctggccattgagc--tgaaatccaccgtgtatttgtgctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cccgttctgggagccatgag-ctcctctgatggctgaggttgactcatggac-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggcttcttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctgtgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTACTGTGTTGTTAGTATTGTACCCTT----------CTATCACACATGTTTCTTCAAGATATATTCAGTAAAATACCCATTTCTCACTACTGCTGTTTGGAGTAGGTC-----ttttttttttttt-cttttt------------------ttgcggggggagatag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2744787 623 - 2847728 GAAAGACTAGACCAACGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggcccagagactacaccctgcagatctccacttacaga-ggagttagtgaccgagagcctggccattgagc--tgaaatccaccgtgcatttgggctgtaaccacat-tcccatgggctgctttccagtcaatgactgaggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcatgggc-ctccagtagctttgctgaaccttccatagactggaaagc-gcctaagatgttttcttgcagactcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaattctgtgctgatatcagcttctcaga--gtccagaccaatataATATCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTGCTGTGTTGTTAGTATTGTACCCTT----------CTATCACAC--GTTTCTTCAAGATATGTTCAGTAAAATACCCATTTCTCACTAATGCTGTTTGGAGTAGATC------TTCGtttttttt-cttttt------------------ttgcggggggagatag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 867045 618 + 2368649 GAAGGACTAGACCAATGGGCAGTTCACTGGGACACTGGGTGGGA-TTTGCAGTGGATAC--CAGAGCAGAGTTTGGGAAGAGAGATTT-----ggccacgagactacaccctgcagatctctacttacaga-ggagttagtgaccaagagcctggccattgagc--tgaaatccaccgtgcatttgtgctgtaaccacat-tcccacaggctgctctccagtcaatgac--aggtggaagcag--------ggatg----------cctgttctgggagccatgag-ctcctctgatggctgaggttgactcagggac-ctccagtagctttgctgaaccttccatagactggaaagc-gcctgagatgttttctcgcagattcctctggctccttcacca-ttttctt----tcacagtagttttcttaataaaatccttgcatgtttaactctgtgctgatatcagcttctcaga--gtccagaccaatataATACCTAATGGGTATTTTTATTTTTGAAGGGAGGTGAATTGCTG---TGTTAGTATTGTACCCTT----------CTGTCACTCATGTTTCTTCAAGATATATTCAGTAAAGTACCCATTTCTCACTAATGCTGTTTGGAGTAGGTC------ttc-tttttttt-cttttt------------------ttgc-ggaggacatag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189600679 587 - 190850796 -----gaaagACTAAGGAAAAGTTCAGTGGCACAGTGGGTAGAA-TTTGCAGTGGACAG--CAGAGCAGAATTCGGGAAGAGAGATTtgtg--gtggaagagactactccctgcagatctccac---------gtgttagagaccaagagcctggccactgagc--tgaaatccaccgggcatttgtgctgca--cacat-tcccatgggctgctctccggccagtgactgaggtggaagcag--------tgctg----------cctgtcctgggagacatgag-ctcctctgatggctgaggttggctcatggac------------------aaccttccatagaccggaaagcagcctaagatgctttctcagagactcctctggctccttcacca-ttttctt----ttacagtagttttcttaataaaatccttgcatgtttaatcctgtgccgatatcagcttctcagagggtccagacCGGCATAATATCTAATGGATATTTTTATTTTTGCAGGGAGGTGGATTGCTGTGTTGTTAGAGATGTACCCTT----------CAATCATTCATGTTTCTTCAAGATATATTCAGTAAAATATGCATTTCTCACCAATGCTGGTTGGAGTAGGTC-------------------tttttt------------------tttttttgagatgtag i calJac3.chr3 I 936 C 0 s cebCap1.NW_016107886v1 985193 588 - 2196201 ------ctagactaAGGAAAAGTTCACTGGTACAGCGGGTAGAA-TTTGCAGTGGATAC--CAGAGCAGAATTTGGGAAGAGAGATTtgtg--gtggaagagacctcaccctgcagatctccacttatagc-ggtgttagagaccaagagcc-agccactgagc--tgaaatccaccgcgcatttgtgctgca--cacat-tcctacgggctgctctctggccagtgactgacatggaagcag--------ggctg----------cctg-cctgggagacatgag-ctcctctgatggctgaggttggctcatggacttcccagtagctttgctgaaacttccatagactggaaagcagcctaagatgctttctcacagactcctctggccccttcacca-gtttctt----ttacagtagttttcttaataaaatccttgcatgtttaatcctgtgctgatatcagcttctcagagggtccggaccgacataATATCTAATGGATATTTTTATTTTTGCAGGGAGGTGAATTGCTGTGTTGTTAGAGATGTACCCTT----------CAATCATTCATGTTT--------------------------GATTTCTCACTAATGCTGGTTGGAGTTGGTC------tttt---------tttttt------------------tttttttgagatgtag i cebCap1.NW_016107886v1 I 2 C 0 s aotNan1.NW_018492112v1 3379931 627 - 5030052 ------CTAGACTAAGGAAAAGTTCACTGGCACAGTGGGTAGAA-TTTGCAGTGGATAC--CAGGGCAGAATTTGGGAAGAGAGATTTGTG--GTGGAAGAGACTACTCCCTGCAGATCTCCACTTACGGA-GGCGTTAGAGACCAAGAGCCTGGCCACGGAGC--TGAAATGCAc---------------ca--cgcat-tcccatgggctgctctcctgccagtgactgagatggaaacag--------tgctg----------cctgtcctgggagacgggag-ctcgtctgatggctgaggttggctcatggacttcccagtagctttgctgaaccttctatagactggaaagcagcctcagatgctttctcacagactcctctggctccttcacca-ttttctt----ttacagtagttttcttaataaaatccttgcatgtttaatcctgtgctgatatcagcttctcagagggtccagactgacataATATCGAATGAATACTTTTATTTTTGCAGGGAGGTGAATTGCTGTGTTGTTAGAGATGTACCCTT----------C-ATCATTCATGTTTCTTCAAGATATATTCAGTAAAACACGCATTTCTCACTAATGCTGGTTGGAGTAGGTG------Ttttttttgtttgttttttgtttttgtttttgttttgtttttttgagatatag i aotNan1.NW_018492112v1 I 2 C 0 s canFam3.chr16 16940705 563 - 59632846 GAAAGACTAGCTCAAAGGAAGGTTCATTAGGGCAGTTGGTGGCACTTTGCAATGGATAC--TGGAAGAAAGACTTGAAAGAGATGTCtgtagtggctgtgaaactatgccttacagatttccaaatagagacagaattact-acctagggcctagctgatgagctttaaaatccatcttcgatttgtgctgtggccccatgtgtcatgagctgctc-ccagccaatgcctgaa--ggcagcag--------ggacactaaattcatccgtttctggaagacatgag-ctcttt--gtggccgaaattggctcaagttt-ccccattggctttgctgaaact----tagacttaatgacagtctaagctgctttctc-caggcttctccaactcttttacca-ttttctc----tcataggaat----gaaataaaatccttgcatatttaatcctgcaccaatggctgcttcccaaaggacccagactaa------------------------------AAGAGAGGTGAATTGCTGTGCTTTTGACAACACTATCTC----------CCCT-ATTCATGTTTCTTCAAAAGACTTTTAATAAAATGCCCATTTCTCAGTAATGCTCATTGAAAT---------------------------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1435752 535 - 2520184 GAGGGGCCGGGCCAAGGGAGCTCTGCCTGGGCCA-TGGTGGGAC-TCTGTGGTGGGCAT--C----CAGTG----------------------GCCTTCGAGA-----------------------GCAAG-GAATGTCTGGACTTCGGATCTGGCCACTGAGG-----------------------GCTGCACCCACCT----------ctgcc--ccagcccttgaccga--caggggcagggcacgaaggctg----------cctgtttctggggacatgagactcctctaa-ggtcgaccttggctcaaggacaccccaacgtccttgctgatccttccttacacaggacagcgagccagcatgccttttcccagtcttcttccattccatccctg-gttttttttcctcacaggaattttccc--taatgtcctggcatgttttgtcttgccctggtgtctgtttctctgaggttccagactaacataACATCTAATGGGCATTTTTTATTTTGAAGGGAG--GGAATGCAGAGCTGTTCATGATGACCCCTC----------CCGCCAT----GTTTCTTCAAGAGACATTCAGTAAAACACTCATTTCTCGATATTGTCCATGGGAGTAGATC-------------------TTGTTT-------------------------GGGGGGCAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=803087.000000 s hg38.chr4_KI270789v1_alt 94605 98 + 205944 tctccctc-tgttgtccaggctggagtgcagtggcgccatctcggctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcggcctcct s panTro5.chr4 192886251 98 + 194502333 tctccctc-tgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacttccgcctcctgggttccagtgattctcctgcctcggcctcct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770075 98 + 195804263 tctccctc-tgttgcccaggctggagtgcagtggcgccatctcggctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcggcctcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806498 99 + 4876863 tctccctcttattgcccaggctggagtgcagtggcgccatcttggctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcggcctcct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696037 98 + 115148730 tctccctc-tgttgcccaggctggagtgcagtggtgccatctcggctcactgcaacttccgcctcctgggttcaagtgattctcctgcctcggcctcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188977983 98 + 190429646 tctcgctg-tgtcacccaggctggagtgcagtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcggcctcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920742 98 + 189454096 tctcgctg-tgtcacccaggctggagtgcagtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308311 98 - 25927173 tctcgctg-tgtcacccaggctggagtgcagtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341883 98 + 4669795 tctcgctg-tgtcacccaagatggagtgcagtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctcct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300251 98 + 135778131 tctcattg-tatcacccaggctggagtgcagtggcgccatctcagctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcggcctcct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2745410 98 - 2847728 tcccgctg-tgtcacccaagctggagtgcggtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcaattctcctgcctcagcctccT i manLeu1.NW_012102221v1 C 0 T 6902 s colAng1.NW_012116221v1 867663 98 + 2368649 tctcgctg-tggcgcccaggctggagtgcggtggcgccatctcggctcactgcaacttctgcctcctgggttcaagcgattctcctgcctcggcctcct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601266 98 - 190850796 cctcactt-ttttgcccagggtagagtgccatggtgcaatcttgactcactgcaacctccacctcccaggttcaagagattcttctgcctcagccttcc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 985781 98 - 2196201 cctcactt-tgttgcccagggtagagtgccatggtgcaatcttggctcactgcaacctccgcctcccaggttcaagagactcttctgcctcagccttcc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380558 98 - 5030052 cctcactt-tgttgcccagggtagagtgccatggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcgattcttccgcctcagccttcc i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e dasNov3.JH570353 1436287 0 - 2520184 C e canFam3.chr16 16941268 0 - 59632846 C e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1150159.000000 s hg38.chr4_KI270789v1_alt 94703 177 + 205944 aagtagctgggattacaggtgcccgccgccatgcccggctaa-------------ttt---cttttgtatttttagcagag-cggggtttcatcatgttggccag----gctggttttgaactcctggcctcaagtaatccgcctgccatggcctcccaaaatgctaggattataggcgtgagccactatgccgggcc s panTro5.chr4 192886349 177 + 194502333 aagtagctgggattacaggtgcccgccgccatgcccggctaa-------------ttt---cttttgtatttttagcagag-tggggtttcatcatgttggccag----gctggttttgaactcctggcctcaagaaatccacctgccgtggcctcccaaaatgctaggattataggcgtgagccaccatgccgggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770173 177 + 195804263 aagtagctgggattacaggtgcccgccgccatgcccggctaa-------------ttt---cttttgtatttttagcagag-tggggtttcatcatgttggccag----gctggttttgaactcctggcctcaagaaatccacctgccgtggcctcccaaaatgctaggattataggcgtgagccaccatgccgggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806597 177 + 4876863 aagtagctgagattacaggtgcccgccgccatgcccggctaa-------------ttt---cttttgtatttttagcagag-cagggtttcatcatgttggccag----gctggttttgaactcctggcctcaagtaatccgcctgccatggcctcccaaaatgctaggattataggcgtgagccaccatgccgggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696135 177 + 115148730 aagtagctgggattacaggtgcccgccgccatgcccggctaa-------------ttt---tttttgtatttttagcagag-cggggtttcatcatgttggccag----gctggttttgaactcctggcctcaagtaatccgcctgcgttggcctcccaaaatgctaggattataggcttgagccaccacaccaggcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978081 188 + 190429646 aagtagctgggattacaggtgcccgccaccctgcctggcttattttattttta--ttt---tttttgtacttttagtagag-cagggtttcctcatgttggccag----gctggttttgaactcctggcctcaagtaatccacccgcctcggcctcccaaaatgctaggattataggcatgaaccactgcgccgggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187920840 188 + 189454096 aagtagctgggattacaggtgcccgccaccctgcctggcttattttattttta--ttt---tttttgtatttttagtagag-cagggtttcctcatgttggccag----gctggttttgaactcctggcctcaagtaatccacccgcctcggcctcccaaaatgctaggattataggcatgaaccactgcgccgggcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308409 188 - 25927173 aagtagctgggattacaggtgcccaccaccctgcctggcttattttattttta--ttt---tttttgtacttttagtagag-cagggtttcctcatgttggccag----gctggttttgaactcctggcctcaagtaatccacccgcctcggcctcccaaaatgctaggattataggcatgaaccactgcgccgggcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3341981 189 + 4669795 aagtagctgtgattacaggtgcccgccaccctgcctggcttattttatttttattttt---tttttgtatttttagtagag-cagggtttcctcatgttggccag----gctggttttgaactcctggcctcaagtaatctgcccgcctcagcctcccaaaatgctaggattataggcgtgagccactgcgcc-ggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300349 191 + 135778131 aagtagctgggattacaggtgcccgccaccccacctggcttattttattttta--tttttatttttgtatttttagtagag-tagggtttcctcatgttggccag----gctggttttgaactcctggactcaagtaatctgcccgccttagcctcccaaaatgctaggattataggcatgagccactgcgccgggcc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 867761 189 + 2368649 aagtagctgggattacaggtgtctgccacccatcctggcttattttattttta--tttt--tttttgtatttttagtagag-cggggtttcctcatgttggccag----gctggttttgaactcctggcctcaagtaatccgcccacctcagcctcccaaaatgctaggattataggcatgagccactgcgcTGGTCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601364 163 - 190850796 aagtagctgagattacaggcatctgccaccatgcccagctaa-------------ttt----ttttgtatttttaatagagacagggtttcaccatgttggccaggct-gctggtttcgaactgctgacctcaagtgatctgcctgtcttggtcttctaaagtgctgggattacaggcacg----------------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 985879 181 - 2196201 aagtagctgagattacaggcatctgccaccatgcccagataa-------------ttt----ttttataattttaatagagacagggtctcaccatgttggccaggctggctggtttcgaactgctgacctcaagtgatctgcctgtcttggccttctaaagtgctgggattacaggcacgagccaccgcgtccagcc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380656 181 - 5030052 aagtagctgagattacagatatctgccaccatacccagctaa-------------ttt----ttttgtatttttaatagagacagggtttcaccatgttggccaggctggctggtttcaaactgctgacctcaagtgatctgcctgtcttgaccttctaaagtgctgggattacaggcacgagccaccgcgtccagcc i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e dasNov3.JH570353 1436287 0 - 2520184 C e canFam3.chr16 16941268 0 - 59632846 C e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2745508 6902 - 2847728 T e otoGar3.GL873580 11224384 42 - 11315646 I a score=163484.000000 s hg38.chr4_KI270789v1_alt 94880 18 + 205944 AGGTCTTCTTTCTTGAGG s panTro5.chr4 192886526 18 + 194502333 AGGTCTTCTTTCTTGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770350 18 + 195804263 AGGTCTTCTTTCTTGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806774 18 + 4876863 AGGTCTTCTTTCTTGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696312 18 + 115148730 AGGTCTTCTTTCTTGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978269 18 + 190429646 AGGTCCTCTTTCTTGAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921028 18 + 189454096 AGGTCCTCTTTCTTGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308597 18 - 25927173 AGGTCCTCTTTCTTGAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342170 18 + 4669795 AGGTCTTCTTTCTTGAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300540 18 + 135778131 AGGTCTTCTTTCTTGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 867950 18 + 2368649 AGGTCTTCTTTCTTGAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601527 18 - 190850796 agGTCTTCTTTCTTGAGG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986060 18 - 2196201 AGGTCTTCTTTCTTGAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380837 18 - 5030052 AGGTCTTCTTTCTTGAGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16941268 18 - 59632846 AGGTTCTTCTTTTTGGGG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e dasNov3.JH570353 1436287 0 - 2520184 C e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2745508 6902 - 2847728 T e otoGar3.GL873580 11224384 42 - 11315646 I a score=82573.000000 s hg38.chr4_KI270789v1_alt 94898 8 + 205944 GGAGGGAC s panTro5.chr4 192886544 8 + 194502333 GGAGGGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770368 8 + 195804263 GGAGGGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806792 8 + 4876863 GGAGGGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696330 8 + 115148730 GGAGGGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978287 8 + 190429646 GGAGGGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921046 8 + 189454096 GGAGGGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308615 8 - 25927173 GGAGGGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342188 8 + 4669795 GGAGGGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300558 8 + 135778131 GGAGGGAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 867968 8 + 2368649 GGAGGGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601545 8 - 190850796 GGAGGGAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986078 8 - 2196201 GGAGGGAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380855 8 - 5030052 GGAGGGAC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16941286 8 - 59632846 AGGGGGGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436287 8 - 2520184 GGAGAGAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17497491 656 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2745508 6902 - 2847728 T e otoGar3.GL873580 11224384 42 - 11315646 I a score=220339.000000 s hg38.chr4_KI270789v1_alt 94906 55 + 205944 AAAGTGAAATAATGAGAACTGCTCTGCAATGTCTTC--TTCAGAAGAG--AAGCTGCCC s panTro5.chr4 192886552 55 + 194502333 AAAGTGAAATAATGAGAACTGCTCTGCAATGTCTTC--TTCAGAAGAG--AAGCTGCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770376 55 + 195804263 AAAGTGAAATAATGAGAACTGCTCTGCAATGTCTTC--TTCAGAAGAG--AAGCTGCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806800 52 + 4876863 AAAGTGAAATAAT---AACTGCTCTGCAATGTCTTC--TTCAGAAGAG--AAGCTGCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696338 55 + 115148730 AAAGTGAAATAATGAGAACTGCTCTGCAATGTCTTC--ATCAGAAGAG--AAGCTGCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978295 30 + 190429646 ACAGTGAAATAACGAGAACTGTTCTGCAAA----------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921054 30 + 189454096 ACAGTGAAATAACGAGGACTGTTCTGCAAA----------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308623 30 - 25927173 ACAGTGAAATAACGAGGACTGTTCTGCAAA----------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342196 30 + 4669795 ACAGTGAAATAATGAGAACTGTTCTGCAAA----------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300566 30 + 135778131 ACAGTGAAATAATGAGAACTGTTCTGCAAA----------------------------- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 867976 30 + 2368649 ACAGTGAAATAATGAGAACTGTTCTGCAAA----------------------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601553 55 - 190850796 AAAGTGAGACAAGGAGAACTGTTCAGGAATGTCTTC--TTCAGAAGAG--AGGCTGCCC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986086 55 - 2196201 AAAGTGAGACAATGAGAACTGCTCAGGAATGTCTTC--TCCAGAAGAG--AAGCTGCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380863 55 - 5030052 AAAGTGAGACAAGGAGAACTGTTCAGGAATGTCTTC--TTCAGAAGAG--AAGCTCCCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498147 55 - 93316391 AAAGTGAAGTGATGAGAACTACTCAGGAATGTCTTC--TTCAAGATAG--AAGCTGCCC i micMur3.chr14 I 656 C 0 s canFam3.chr16 16941294 57 - 59632846 AAAGTGAAATAATGAGAACTGTTCGGGAATGCCACAGGTTAAGGATAG--AAGCTGCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436295 48 - 2520184 CAAGTGAAGTGATGAGAGCTGCTCAGGAAT-----------GGAATAGCTGAGTTGCCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e manLeu1.NW_012102221v1 2745508 6902 - 2847728 T e otoGar3.GL873580 11224384 42 - 11315646 I a score=266604.000000 s hg38.chr4_KI270789v1_alt 94961 23 + 205944 ATAGAACAGAGTCCCATGTAGAT s panTro5.chr4 192886607 23 + 194502333 ATAGAACAGAGTCCCACGTAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770431 23 + 195804263 ATAGAACAGAGTCCCACGTAGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806852 23 + 4876863 ATAGAACAGAGTCCCATGTAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696393 23 + 115148730 ATAGAACAGAGTCCCATGTAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978325 23 + 190429646 ATAGAACAGGGTCCCATGTAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921084 23 + 189454096 ATAGAACAGGGTCCCATGTAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308653 23 - 25927173 ATAGAACAGGGTCCCATGTAGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342226 23 + 4669795 ATAGAACAGGGTCCCATGTAGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300596 23 + 135778131 ATAGAACAGGGTCCCATGTAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738606 23 - 2847728 ATAGAACAGGGTCCCATGTAGAT i manLeu1.NW_012102221v1 T 6902 C 0 s colAng1.NW_012116221v1 868006 23 + 2368649 ATAGAACAGGGTCCCATGTAGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601608 23 - 190850796 ATAGGACAGAGTCCCATGTAGAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986141 23 - 2196201 ATAGAACAGAGACCCATGTAGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380918 23 - 5030052 ATAGAACAGAGTCCCATGTAGAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498202 23 - 93316391 ATAGAATAGAGTCCCACGTAGAT i micMur3.chr14 C 0 I 195 s canFam3.chr16 16941351 23 - 59632846 ACAGCACAGAATCACATGTAGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436343 17 - 2520184 ATAGAGTGAAGTCCTGT------ i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1147478.000000 s hg38.chr4_KI270789v1_alt 94984 126 + 205944 GATACAGTGATATTAAATAGAACGTTCCCCACAGAAGTTTAACGCGATTAGTATCAAGGTGACGCTTA-TAAATGCTA---ATGCAAGAATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAGCGATG--- s panTro5.chr4 192886630 126 + 194502333 GATACAGTGATATTAAATAGAACGTTCCCCACAGAAGTTTAACGCGATTAGTATCAAGGTGACGCTTA-TAAATGCTA---ATGCAAGAATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAGCGATG--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770454 126 + 195804263 GATACAGTGATATTAAATAGAACGTTCCCCACAGAAGTTTAACGCGATTAGTATCAAGGTGACGCTTA-TAAATGCTA---ATGCAAGAATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAACGATG--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3806875 126 + 4876863 GATACAGTGATATTAAATAGAACGTTCCCCACAGAAGTTTAACGCGATTAGTATCAAGGTGACGCTTA-TAAATGCTA---ATGCAAGAATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAGCGATG--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696416 126 + 115148730 GATACAGTGATATTAAACAGAACGTTCCCCACAGAAGTTTAATGCGATAAGTATCAAGGTGACGCTTA-TAAATGCTA---ATGCAAGAATGCCATTCAGGTGTCTTGCTTTATACCCAAAAAAATGATG--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978348 127 + 190429646 GATACAGTGATATTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACACTTATTAAATGCTG---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921107 127 + 189454096 GATACAGTGATATTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACACTTATTAAATGCTG---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308676 127 - 25927173 GATACAGTGATATTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACACTTATTAAATGCTG---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342249 127 + 4669795 GATACAGTGATATTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACGCTTATTAAATGCTG---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTACACCTAAAAAAATGATG--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300619 127 + 135778131 GATACAGTGATATTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGATGCTTATTAAATGGTA---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738629 127 - 2847728 GATACAGTGATGTTAAATAGAACATTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACGCTTATTAAATGCTG---ATGCAAGCGTGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868029 127 + 2368649 GATACAGTGATATCAAGTAGAACGTTCCCCACAGAAGTTTAATGCAATTAGTATCAAGGTGACGCTTATTAAATGCTG---ATGCAAGCATGCCATTCAGGAGTCTTGCTTTATACCTAAAAAAATGATG--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601631 126 - 190850796 GATGCAGTGATATTAACTAGAACGTTCCCCACAGACGTTTAACACAATTAGTATCGAGGCGATGCTTA-TAAATGCTA---ACGCAAGAATGCTACTCAGGAGTCTTGCCTTATGCCTCAAAAAATGATG--- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986164 126 - 2196201 GATGCAGTGATGTCAAGTAGAACGTTCCCCACAGAAGTTTAACACAATTAGTGTCAAGGGGATGCTTA-TAAATGCTA---ATGCAAGAATGCTACTCAGGGGTCTTGCCTTATACCTCAAAAAATGATG--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3380941 126 - 5030052 GATGCAGTGATATTAAGTAGAACGTTCCCCACAGAAGTTTAACACAATTAGTATCAAGGAGATGCTTA-TAAATGCTA---ATGCAAGAATGCTACTCAGGAGTCCTGCCTTATACCTCAAAAAATGATG--- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16941374 117 - 59632846 TATACAGTAATATTAA-------GTCCCTCACCTAAG--TAAAACTATGAGTATCAAGGTGTCACTTA-TTTGTGCTGACTATGCAATTATGTCACTCATGACTCTTA---TATCCCAGAAGATATTATG--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436360 105 - 2520184 -----AGTG-TATTG--------TTTCCTCACATAAG--TAAAACCATGAGTAT-----------TCA-TCAATGCCAAAGACACAGGTAAGCCATTCAAGAGTTTTATTCTATACTGCAAAAGGAAATTATA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3937672 808 + 3993831 I e micMur3.chr14 17498225 195 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=631205.000000 s hg38.chr4_KI270789v1_alt 95110 54 + 205944 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG s panTro5.chr4 192886756 54 + 194502333 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770580 54 + 195804263 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807001 54 + 4876863 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGACAGGTAATAGTTATATAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696542 54 + 115148730 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGTTAATAGTTATATAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978475 54 + 190429646 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921234 54 + 189454096 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATCGTTATATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308803 54 - 25927173 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342376 54 + 4669795 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300746 54 + 135778131 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738756 54 - 2847728 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAGTTATATAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868156 54 + 2368649 TGTTCCTGATTGTGGAATATCTTTACAGGTAGAAGGCAGGTAATAATTATATAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601757 54 - 190850796 TGTTTCTGACTGTGGAATACCTCCACAGGTAGAAGACAGGTAATAGTTATGTAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986290 54 - 2196201 TGTTTCTGACTGTGGAATATCTTCACAGGTAGAAGGCAGGTAACAGTTACACAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381067 54 - 5030052 TGTTTCTGACTGTGGAATATCTTAACAGGTAGAAGGCAGGTAATAGTTACACAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3938480 50 + 3993831 TGTTTCTGATTATGGAATATCTTGAAAGGTAGAAGGCAGGTGA----TATATAG i proCoq1.NW_012145301v1 I 808 I 7 s canFam3.chr16 16941491 51 - 59632846 TGTTCCTGATTGTGAAATATCCTAAAAAGTAGGAGGTACATAATA---ATATAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436465 54 - 2520184 TGTTCCCACTGATGGAACCAACTGAAAGGTAGAAGGCAGGTAATAATTATACAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17498225 195 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1206484.000000 s hg38.chr4_KI270789v1_alt 95164 98 + 205944 AAATAAAACAAAAATAACAATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------atctCCTAATTTTAAAT s panTro5.chr4 192886810 98 + 194502333 AAATAAAACAAAAATAACAATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------atctCCTAATTTTAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770634 98 + 195804263 AAATAAAACAAAAATAACAATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------atctCCTAATTTTAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807055 98 + 4876863 AAATAAAACAAAAATAACAATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------atctCCTAATTTTAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696596 100 + 115148730 AAATAAAACAAAAATAACAATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaagcacgttagcaagac------c----------atctCCTAATTTTAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978529 98 + 190429646 AAATAAAACAAAAATAACTATGTGTAGGATACAGCCtcaaagattcccagaatattagagctacgaggcacgttag--agac------c----------acctCCTAATTTTAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921288 98 + 189454096 AAATAAAACAAAAATAACCATGTGTAGGACACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------acctCCTAATTTTAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308857 98 - 25927173 AAATAAAACAAAAATAACCATGTGTAGGATACAGCCtcaaagattcccagaatattagagctacgaggcacgttag--agac------c----------acctCCTAATTTTAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342430 98 + 4669795 AAATAAAACAAAAATAACCATGTATAGGATACAGCCtcaaagattcccagaatattagagctagaaggcacgttag--agac------c----------acctCCTAATTTTAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300800 98 + 135778131 AAATAAAACAAAAATAACCATGTATAGGATACAGCCtcaaagattcccagaatattagagctacaaggcacgttag--agac------c----------acctCCTAATTTTAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738810 98 - 2847728 AAATAAAACAAGAATAACCATGTATAGGATACAGCCTCAAagattcccagaatattagagctacaaggcacgttag--agac------c----------acctcctaacttTAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868210 98 + 2368649 AAATAAAACAAAAATAACAATGTATAGGATACAGCCTCACAGATTTCCAGAATATTAGAGCTACAACGCACGTTGG--AGAC------C----------GCCTCCTAATTTTAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601811 98 - 190850796 AAATAAAACAAAAATGATAGTGTATAGGATACAGCCTCAAAGATTCCCAGAGTATCAGAGGTACGAGGCCTGTTAG--AGAC------C----------ATCTCCTAATTTTAAAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986344 98 - 2196201 AAATAAAACAAAAATAATAGTGTATAGGATACAGCCTCAAAGATTCCCAGAGTATCAGAGGTACCAGGCCTGTTAG--AGAC------C----------ATCTCCTAATTTTAAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381121 98 - 5030052 AAATAAAACAAAAATAATAGTGTATAGGATACAGCCTCAAAGATTCCCAGAGTATCAGAGGTACGAGGCCTGTTAG--AGAC------A----------ATCTCCTAATTTTAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498420 97 - 93316391 aaataaaacaaaaataacaatGTATAGCATACAGCCTCAAAGATTCCCAGAATATTCGTGTTTCAAGGCCTGGTAG--AGAC------C----------AACTCCTAAC-TGAAAT i micMur3.chr14 I 195 C 0 s proCoq1.NW_012145301v1 3938537 97 + 3993831 AAATAAAACAAAAATAACAGTGTATAACATACAGCCTCAAAGATTCCCAGAATATTCGTGCTACAAGGCCTGTTAG--AGAC------C----------AACTCCTAAT-TGAAAT i proCoq1.NW_012145301v1 I 7 C 0 s canFam3.chr16 16941542 103 - 59632846 TAATAAAATAA-CATAAGAGTGTATAGGATTCAGCTtcaaagattcacaggatatgagagccacaaagcactcctg--tgacaactatc----------atctcctaattataaat i canFam3.chr16 C 0 I 111 s dasNov3.JH570353 1436519 107 - 2520184 GAATAAAACAAAAATAACTGAGGATAGGAGATGGCCtcagagagtca-aaaatatgagagctacaaggcatctcaa--aggc------cacttagtgcaacctcttcatttttaat i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=471312.000000 s hg38.chr4_KI270789v1_alt 95262 41 + 205944 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG s panTro5.chr4 192886908 41 + 194502333 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770732 41 + 195804263 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807153 41 + 4876863 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696696 41 + 115148730 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978627 41 + 190429646 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921386 41 + 189454096 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308955 41 - 25927173 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342528 41 + 4669795 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300898 41 + 135778131 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTTTAGTGAGAGAAGTTGCAGC-CTGTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738908 41 - 2847728 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868308 41 + 2368649 -----------------------------ACTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601909 41 - 190850796 -----------------------------GTTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGGAGCTGCAGC-CTGTTG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986442 41 - 2196201 -----------------------------GTTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGGGAAGCTGCAGG-CTGTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381219 41 - 5030052 -----------------------------GTTC----------------------------TTTTGA---------------------------------------ATATTCTAGTGAGAGAAGCTGCAGC-CTGTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498517 41 - 93316391 -----------------------------GCTC----------------------------TTTTGA---------------------------------------ACATTCAAGGGGGAGAAGCTACAGC-CTGTTG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3938634 41 + 3993831 -----------------------------GCTC----------------------------TTTGGA---------------------------------------ACATTCAAGGGAGAGAAACTACAGC-CTGTTG i proCoq1.NW_012145301v1 C 0 I 341 s canFam3.chr16 16941756 39 - 59632846 -----------------------------GCTC----------------------------CTTGGA---------------------------------------GCATATTAGTGAAAGTAAATGCAGCACTG--- i canFam3.chr16 I 111 C 0 s dasNov3.JH570353 1436626 137 - 2520184 gtcagaaatggagaaaggagagatgacttgctcaaagtcacacaAACTATATCAGGGCCCATTCTGACCACCTCTTACAAACCTCTGATGTCTAGCTGTGCTGTTCACATACTGAGGAGATAAACTGCAGC-TTTTTG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=160074.000000 s hg38.chr4_KI270789v1_alt 95303 13 + 205944 AGACTCCACAAGA s panTro5.chr4 192886949 13 + 194502333 AGACTCCACAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770773 13 + 195804263 AGACTCCACAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807194 13 + 4876863 AGACTCCACAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696737 13 + 115148730 AGACTCCACGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978668 13 + 190429646 AGACTCCACAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921427 13 + 189454096 AGACTCCACAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24308996 13 - 25927173 AGACTCCACAAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342569 13 + 4669795 AGACTCCACAAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300939 13 + 135778131 AGACTCCACAAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738949 13 - 2847728 AGACTCCACAAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868349 13 + 2368649 AGGCTCCACAAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601950 13 - 190850796 AGATTCCACAAGG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986483 13 - 2196201 AGATTCCACAAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381260 13 - 5030052 AGATTCCACAAGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498558 13 - 93316391 TGATCCCACAAGA i micMur3.chr14 C 0 I 328 s canFam3.chr16 16941795 13 - 59632846 AGATTCCACAAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436763 13 - 2520184 ATGTTCTACAAGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3938675 341 + 3993831 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=1043343.000000 s hg38.chr4_KI270789v1_alt 95316 130 + 205944 CTGAAGATATGAAAAGAGGAAATATGCATGAATGCCCGCACGGAGAACCA-CCCCCACCTGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGGGGGATGGCTCTGTGCCTTGTCCTTGCATTACA s panTro5.chr4 192886962 130 + 194502333 CTGAAGATATGAAAAGAGGAAATCTGCATGAATGCCCGCATGGAGAACCA-CCCCCACCTGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGAGGGATGGCTCTGTGCCTTGTCCTTGCATTACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770786 130 + 195804263 CTGAAGATATGAAAAGAGGAAATCTGCATGAATGCCCGCATGGAGAACCA-CCCCCACCTGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGAGGGATGGCTCTGTGCCTTGTCCTTGCATTACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807207 130 + 4876863 TTGAAGATATGAAAAGAGGAAATATGCATGAATGCCCGCATGGAGAACCA-CCCCCACCTGCTGCTGCCGCTCTAATGATCACGCCCATTATCAACTGAGGGATGGCTCTGTGCCTTGTCCTTGCATTACG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696750 130 + 115148730 TTAAAGATATGAAAAGAGGAAATATGCATGAATGCCCGCGTGGAGAACCA-CCCCCACCTGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGAGGGATGGCTCTGTGCCTTGTCCTTGCATTACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978681 129 + 190429646 TGAAAGATATGAAAAGAGGACATATGCATGAATGCCTGCATGGAGAACCA-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCATTATTAACTGAGGGATGACTGTGGGCCTTGTCTTTGCATTACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921440 129 + 189454096 TGAAAGATATGAAAAGAGGACATATGCATGAATGCCTGCATGGAGAACCA-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCATTATTAACTGAGGGATGGCTGTGGGCCTTGTCTTTGCATTACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309009 129 - 25927173 TGAAAGATATGAAAAGAGGACATATGCATGAATGCCTGCATGGAGAACCA-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCATTATTAACTGAGGGATGGCTGTGGGCCTTGTCTTTGCATTACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342582 129 + 4669795 TGAAAGCTATGAAAAGAGGACATATACATGAACGCCTGCGCGGAGAACCC-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCGTTATTAACTGAGGGATGGCTGTGGGCCTTGTCTTTGCATCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134300952 129 + 135778131 TGAAAGATATGAAAAGAGGACATATGCATGAATGCCTGCATGGAGAACCA-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCATTATTAACTGAGGGATGGTTGTGGGCCTTGTCTTTGCATTACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2738962 129 - 2847728 TGAAAGATACGAAAAGAGGACATATGTGTGAACGCCTGCATTGAGAACCA-CCCTTG-CTGCTGCTCCCACTCTAATGATCATGCCCATTATTAACTGAGGGACGGCTGTGGGCCTTGTCTTTGCATTACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868362 130 + 2368649 TTAAAGATATGAAAAGAGGACATAGGCATGAATGTCTGCGTGGGGAACCACCCCTTG-CTGCTGCTCCCACTCTGTTGATCATGCCCATTATTAACTGAGGGATGGCTGTGGGTCTTGTCTTTGCCTTACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189601963 126 - 190850796 TTAAATACATGAAAAGAGGAACCACGCGTGCGTGCCTGCATGGAGAACTA-CACCCAC---CTGTTCCCTCTCTGACGATAATGCCCACTGTTAACTGAGGGATGGCTCTGTGCCTCGTCCTT-CGCTACA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 986496 130 - 2196201 TTAAATATATGAAAAGCGGAAATATGCATGCACGCCTGCATGGAGAGCTA-CGCCCGCCTGCTGTTCCCTCTCCAACGATAATGCCCACTGTTAACTGAGGGACGGCTCTGCGCCTCGTCCTTGCATTGCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381273 130 - 5030052 TAAAATATATGAAAAGAGGAAGTACGCATGCATGCCTGCGTGGAGAACCA-CACCCACCTGCTGTTCCCTCTCTAACGATAATGCCCACCGTTAACTGAGGGACGGCTCTGTGCCTTGTCCTTGCGTTACA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16941808 110 - 59632846 TCTAATGTACAAGAAGAATAAATGTGTATGGAAACAGGCATATGGAGCTA-TATTCA-CATATATTTCC-------------------TTTTTAACTGAAGGATGGCTAGGTACCTTGCCCTTACTATACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1436776 125 - 2520184 TCAAATGTAAGAAAGGAAGAAATACTTGCAGATGCAGGTGTATAGAATTA-CACGCT-CATGTTTTCCTTATGCAATGAAAATGCCCATAATTAACTGAGGATTGACTTTGTCC----TGCTTGCTTTAGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3938675 341 + 3993831 I e micMur3.chr14 17498571 328 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e saiBol1.JH378165 13087857 3140 - 14256875 M e otoGar3.GL873580 11224384 42 - 11315646 I a score=931633.000000 s hg38.chr4_KI270789v1_alt 95446 94 + 205944 TGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATGAGAGAAACCTATTCTTATAGAGGATGAAAATGAAGCACACAGGGAGGTAAAGTGC s panTro5.chr4 192887092 94 + 194502333 TGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTCTTATAGAGGATGAAAATGAAGCACACAGGGAGGTAAAGTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192770916 94 + 195804263 TGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTCTTATAGAGGATGAAAATGAAGCACACAGGGAGGTAAAGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807337 94 + 4876863 TGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTCTTATAGAGGATGAAAATGAAGCACACAGGGAGGTAAAGTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696880 93 + 115148730 CAGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCTGTTTTTATAGAGGATGAAAATGAAGCACACAGGGA-GTAAAGTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978810 94 + 190429646 CGGAC-CAAGAACACTTCGCAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTTTTGTAGAGGATGAAAGTGAAGCACACAGGGAAGTGAAGTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921569 94 + 189454096 CGGAC-CAAGAACACTTCGCAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTTTTGTAGAGGATGAAAGTGAAGCACACAGGGAAGTGAAGTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309138 94 - 25927173 CGGAC-CAAGAACACTTCGCAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTTTTGTAGAGGATGAAAGTGAAGCACACAGGGAAGTGAAGTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342711 94 + 4669795 CGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCGATTTTTGTAGAGGATGAAAATGAAGCACACAGGGAAGTAAAGTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301081 94 + 135778131 CGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCTATTTTTATAGAGGATGAAAATGAAGCACACAGGGAAGTAAAGTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739091 94 - 2847728 CGGAC-CAAGAACACTTCACAGGACTCAGA-GAGGTAAATAAGAGAAACCGATTTTTGTAGAGGATGAAAATGAAGCACACAGGGAAGTAAAGTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868492 94 + 2368649 CGGAC-CAGGAACACTTCACAGGACTCAGA-GAGGCAAATAAGAGAAACCTATTTTTGTAGAGGATGAAAATGAAGCACACAGGGAGGTAAAGTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602089 92 - 190850796 TGGACTCAGGAGCACTTCACAGGACTC--A-GAGGTAAACAAGGAGAACCTGTTTTCATAGACCGCGAAGATGAAGCACACGGGGAGGT-AAGCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13090997 92 - 14256875 TGGACTCAGGAACACTTCACAGGACTC--A-GAGGTAAATAAGGAAAACCTGTTTTCATAGACGATGAAGATGAAGCACGTGGGGAGGT-AAGTGC i saiBol1.JH378165 M 3140 C 0 s cebCap1.NW_016107886v1 986626 91 - 2196201 CGGACTCAGGGACACTTCACAGG-CTC--A-GAGATAAATAAGGAAAACGTGTTTTCATAGAGGATGCGGATGAAGCACACAGGGAGGT-AAGTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381403 92 - 5030052 TGGACTCAGGAACACTTCACAGGACTC--A-GAGGTAAATAAGGAAAACCTGTTTTCATAGATGATGAAGATGAAGCACACAGCAAGGT-AAGTGC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16941918 95 - 59632846 AGGACTCAAGACTTCCTCAAAAAACTCACA-AGGGtaaataataaaattatatttttataGAAGATGAAGATGAAGTATCCAAGATTACACAGTAC i canFam3.chr16 C 0 I 20 s dasNov3.JH570353 1436901 95 - 2520184 AGGATCCAGGGaatcctcacaagattcacatgaagtaaatgataatattccatttttatagatgatgaaaatgaagcagagaaagc-ctaaagtgc i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3938675 341 + 3993831 I e micMur3.chr14 17498571 328 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I e otoGar3.GL873580 11224384 42 - 11315646 I a score=-36773.000000 s hg38.chr4_KI270789v1_alt 95540 8 + 205944 --------------------CCC-------------------------------------------------------AAAAT-------------------------------- s panTro5.chr4 192887186 8 + 194502333 --------------------CCA-------------------------------------------------------AAAAT-------------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771010 8 + 195804263 --------------------CCA-------------------------------------------------------AAAAT-------------------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807431 8 + 4876863 --------------------CCA-------------------------------------------------------AAAAT-------------------------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696973 13 + 115148730 --------------------CCAATGCG--------------------------------------------------AAAAT-------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978904 13 + 190429646 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921663 13 + 189454096 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309232 13 - 25927173 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342805 13 + 4669795 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301175 13 + 135778131 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739185 14 - 2847728 --------------------CCAGTGTGA-------------------------------------------------AAAAT-------------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868586 13 + 2368649 --------------------CCAGTGTG--------------------------------------------------AAAAT-------------------------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602181 12 - 190850796 --------------------CCAGTGC---------------------------------------------------CAAAG-------------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091089 12 - 14256875 --------------------CCAATGC---------------------------------------------------GAAAG-------------------------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 986717 12 - 2196201 --------------------CCAATGC---------------------------------------------------GAAAG-------------------------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381495 12 - 5030052 --------------------CCAGTGC---------------------------------------------------AAAAG-------------------------------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11224426 8 - 11315646 ----------------------------CC-----------------------------------------------TGAAAG-------------------------------- i otoGar3.GL873580 I 42 C 0 s canFam3.chr16 16942033 63 - 59632846 --------------------CCACTTCGTCCCAACTTCATAATGGGGACTGGCgtgctcgctttggcagcacatatacaaaat-------------------------------- i canFam3.chr16 I 20 I 59 s dasNov3.JH570353 1436996 75 - 2520184 ccaggattacatagctaACTCCAGTTCTTCAAAACTCC----------------------------------------AAAAGAGACTGGCCATTGAAACAGATATTTTTTGAAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3938675 341 + 3993831 I e micMur3.chr14 17498571 328 - 93316391 I e mm10.chr8 86574571 568 - 129401213 I a score=105359.000000 s hg38.chr4_KI270789v1_alt 95548 6 + 205944 CCCATC s panTro5.chr4 192887194 6 + 194502333 CCCATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771018 6 + 195804263 CCCATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807439 6 + 4876863 CCTATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696986 6 + 115148730 CCCACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978917 6 + 190429646 CCCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921676 6 + 189454096 CCCATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309245 6 - 25927173 CCCATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342818 6 + 4669795 CCCATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301188 6 + 135778131 CCCATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739199 6 - 2847728 CCCGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868599 6 + 2368649 CCCACC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602193 6 - 190850796 CCCGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091101 6 - 14256875 CCCATC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 986729 6 - 2196201 CCCATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381507 6 - 5030052 CCCATC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498899 6 - 93316391 cccatc i micMur3.chr14 I 328 C 0 s proCoq1.NW_012145301v1 3939016 6 + 3993831 CCCATC i proCoq1.NW_012145301v1 I 341 C 0 s otoGar3.GL873580 11224434 6 - 11315646 CTCATC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16942155 6 - 59632846 CCCATC i canFam3.chr16 I 59 C 0 s dasNov3.JH570353 1437071 6 - 2520184 CTCATC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86574571 568 - 129401213 I a score=4496662.000000 s hg38.chr4_KI270789v1_alt 95554 291 + 205944 TGAACTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAAGGGAAAAAAATAACAGATGTGTTTAATGGCTTTA-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAATGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCCTCAAGGCCTTTGGATATGC-AAAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGATTTACGCAGTGACCAAAATACTGATT s panTro5.chr4 192887200 290 + 194502333 TGAACTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAAGGGAAAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAATGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCCTCAAGGCCTTTGGATATGC--AAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTAAAAGTATTGATTTACGCAGTGACCAAAATACTGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771024 290 + 195804263 TGAACTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAAGGGAAAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAATGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCCTCAAGGCCTTTGGATATGC--AAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTAAAAGTATTGATTTACGCAGTGACCAAAATACTGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807445 291 + 4876863 TGAACTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAAGGGAAAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAGAATATGTGAAATGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCCTCAAGGCCTTTGGATATGC-AAAAAAAAATGATCACTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGATTTACACAGTGACCAAAATACTGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112696992 290 + 115148730 TGAACTGGCTTTAGAAACC---ATATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGGAAAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAACGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTG-TTTTTGCTTAAAATTCCTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTACTGATTTATGCAGTGACCAAAATACTGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188978923 289 + 190429646 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCATTGTTTATTATAATTTTGCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTGTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921682 289 + 189454096 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCATTGTTTATTATAATTTTGCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTGTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309251 289 - 25927173 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCATTGTTTATTATAATTTTGCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTGTCATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3342824 291 + 4669795 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAGTGAACATATTGCCGTTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGTAAAAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301194 289 + 135778131 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGA-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCGTTGTTTATTATAAGTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739205 287 - 2847728 TGAATTGGCTTTAGAAACC---GTATATTTACTTTTTCATA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCATTGTTTATTAT-ATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT---AAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868605 289 + 2368649 TGAACTGGCTTTAGAAACC---GTGTATTTACTTTTTCACA-TAATTTG-TTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACACTTAAACAGGTGGACCTCAAAATATGGGAAATGAACATATTGCCATTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTTAAAATTCTTCAAGGCCTTTGGATATGT--AAAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGAATTATGCAGTGACCAAAATACTGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602199 287 - 190850796 TGCATTGGCTTTAGAAACT---GTATATTTACTTTTTCACA-TAATTTT-TTTGTC-TAGAGG-AAAAAGTAACAGATGTGTTTAATGGCGTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAAGGAACATATTGCTGTTG-TTTTTATAATTTTCCTTCCTTCTA-TTTTTGCTCAGAATTTCTCAAGGCCTTTGGACATGT---AAAAAAATGAGCATTTGTTTTATGATGTTTCTTAATAGAAACAA-TTTTTTAAAGTATTGATTTATGCAGTGACCAGAATACGGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091107 288 - 14256875 TGAATTGGCTTTAGAAACT---GTCTATTTACTTTTTCACA-TAATTTTGTTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGACTCTG-GAAACATTTAAACAGGTGGACCTCAAAATATGCGAAACGAACATATTGCTGTTG-TTTTTATAATTTTCCTTCCTTCTA-TTTTTGCTCAAAATTTCTCAAGGCCTTTGGACATGT---AAAAAAATGAGCATTTGTTTTATTACGTTGCTTAATAGAAACAA-TTTTTTAAAGTATTGATTTATACAGTGACCAGAATACTGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 986735 289 - 2196201 TGAATTGGCTTTAGAAACT---GTCTAGTTACTTTTTTACA-TAATTTTGTTTATC-TAGAGG-AAAAAATAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAATGAACATATTGCTGTTG-TTTTTATAATTTTCCTTCCTTCTA-TTTTTGCTGAAAATTTCTCAAGGCCTTTGGACATGT---AAAAAAATGAGCATTTGTTTTATTATGTTGCTTAATAGAAACAATTTTTTTAAAGTATTGATTTATGCAGTGACCAGAATACTGATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381513 289 - 5030052 TGAATTGGCTTTAGAAACT---GTATATTTACTTTTTCACA-TAATTTTGTTTATC-TAGAGG-AAAAAGTAACAGATGTGTTTAATGGCTTTG-GAAACATTTAAACAGGTGGACCTCAAAATATGTGAAATGAACATATTGCTGTTGTTTTTTATAATTTTCCTTCCTTCTA-TTTTTGCTCAAAATTTCTCAAGGCCTTTGGACATGT---AAAAAAATGAGCATTTGTTTTATTATGTTACTTAATAGAAACAA-TTTTTTCAAGTTTTGATTTATGCAGTGACCAGAATACTGATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17498905 292 - 93316391 tgcATTGGCTTTAAATACC---GTGTACTTATTTTCTCATA-TAATTTG-TTTATCACAGAGGAAAAAAATAACAGATGCATTTAGTGGCTTTG-AAAACATTTAAACAGGTGGACCTCAAAGTATATGAAAGGAACATATTGCTGTTGTTTATTATAATTTTCCTTCCTTCTATTTTTTGCTCAAAATTGCTCAAGGCCTTTAGACACGT---AAGAAAATGAGCATTTGTTTTATTATGTTGCTTAATATAAATACTTTTTTTAAAATGTTGATTTATGCAGTGACCAAAATACTGATT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3939022 291 + 3993831 TGCATTGGCTTTAGATACC---TTGTACTTATTTTCTCATA-TAATTTG-TTTATCTCAGGGGAAAAAAATAACAGATGCATTTAGTGGCTTTG-AAAACATTTAAACAGGTGGACCTCAAAGTTTGTGAAAGGAACATATTGCTGTTGTTTATTATAATTTTCCTTCCTTCTA-TTTTTGCTCAAAATTGCTCAAGGCCTTTAGACATGT---AAGAAAATGAGCATTTGTTTTATTATGCTGCTTAATATAAATAATTTTTTTAAAATGTTGATTTATGCAGTGACCAAAATACTGATT i proCoq1.NW_012145301v1 C 0 T 16904 s otoGar3.GL873580 11224440 287 - 11315646 TGAATTGGCTTTAGATCCC---ATATACTTATTTTCTCATA-TAATTTG-TTTATCACAGGGGAGAAAAGTAACAGATGCCTTTAGTGGC-TTA-AAAACACTTAAACAGGTGGGCCTCAAAGTATGTAAAAGGAACATATTGCTGTTGTTTATTATAATTTTCCTCTGTTCTA-TTTCTGCTCAAAATTGCCCAAGGCCTTTAGACACTT---AAGAAGATGAGCATTTGTTTTATAATGCTGCTTAATAT---CTTTTTTTTTTAAATGTTGATTTATGCAGTGACCAAAATACTGATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86575139 252 - 129401213 TAAATTGGCTTCAAGTACt----taaatatacattttaaaatttatttt-gttata-tag----aaaaaataaCAGATGCATTTAATAGC-TTA-GAAACATTTAAACAGGTGGACATC----------AAATGAACATATTGCTAT---TTTTAATAGTTTTCCATGTTTCTA-TTTTTGCTACAAATCCCTCAAGATCTTTCAACACTT-----AAAAATGAACatt--ttttattatcatttttaatataaacat---ttttaaaGTGTTGAACT------TAAAAAAAAC------- i mm10.chr8 I 568 C 0 s canFam3.chr16 16942161 284 - 59632846 CAAATTGACTTTAGATACTTATATGTACTAATTTTTTCATA-TAACTTA-T------CACAGA-AAAAAGTAACAGATGCATTTAGTGGCTTTGAAAAACATTTAAACAGGTGGACCTCAAAATATATAAAATGAGCATATTGCTAT-GTTTACTCTAGTTTTCCTTCTTTCTG-TTTTTACTAAAAA-ACCCCAAGCCTTATTAAAACTT--TTAAAAAGTGGG-ATTTGTTTCATCATGTTCCTTACTATAAACAA-CTTTTCAAGG-GTTGATTTATGCAGTGATCTAAATACTACTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437077 266 - 2520184 TCACTTGGCTTTAGATATTTACATATACTTTTTTTCTCATA-TAATTTG-TTAATC---ATGG-GAAAAAAAACAGATGCATCTAATAACTCCA-AAAATGTTTAAACAGCTGGGCCCCAAAG-ACATGAAATGAGCATATTA------------------TACTTCCCTTCTA-ATTTTGCTAAAAA-TCCCCAAAGCCTTTGGGCACTT-----AAAAATGAGCATTTGTTTTATTATGTTACTTAATATGAA-AA-CTTTTTAAGGTGTTGATTTATGCAGTGACCAAAATTCTTATG i dasNov3.JH570353 C 0 C 0 a score=1418875.000000 s hg38.chr4_KI270789v1_alt 95845 107 + 205944 CTAAACAACAA-------AAC--------ATGCAGCTGTTACGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAACTAG s panTro5.chr4 192887490 107 + 194502333 CTAAACAACAA-------AAC--------ATGCAGCTGTTACGAATCCTGGACGAGCTCTGGAAA-TCTGTGGTATTGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771314 107 + 195804263 CTAAACAACAA-------AAC--------ATGCAGCTGTTACGAATCCTGGACGAGCTCTGGAAA-TCTGTGGTATTGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807736 107 + 4876863 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697282 107 + 115148730 CTAAACAACAA-------AAC--------ATGCAGCTGTTACGAATCCTGGATGAGCTCTGGAAA-TGTGTGGTATTGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979212 107 + 190429646 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCCGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187921971 107 + 189454096 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCCGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309540 107 - 25927173 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCCGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343115 107 + 4669795 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301483 107 + 135778131 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739492 107 - 2847728 CTAAACAACAA-------AAC--------ATGCAGCTGTTATGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 868894 107 + 2368649 CTAAACAACAA-------AAC--------ATGCAGCTGTTGTGAATCCTGGACGAGCTCTGGAAA-TGTGTGGTATTATCTTGCAGA-GAAGCT-GTT--T-TTGTTCTAGTCAAATATGGAAATTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602486 106 - 190850796 CTAAACCACAG-------AAC--------GTGC-CCCGCTGGAAATCCTGGGCAAGCTCTGGAAA-TGTGTGGCATTGTCTTGCAAA-TAAGCT-GTT--T-TTGTTCAAGTCAAATGTGGAAATTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091395 107 - 14256875 CTAAACAACAG-------AAC--------GTGCACCTGCTGGAAATCTTGGGCAAGCTCTGGAAA-TGTGTGGCATTGTCTTGCAAA-TAAGCT-GTT--T-TTGTTCAAGTCAAATGTGGAAATTAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987024 107 - 2196201 CTAAACAGCAG-------AAT--------GTGCACCTGCTGGAAAGCCTGGGCAAGGTCTGGAAA-TGTGTGGCATTGTCTTGCAAA-TAAGCT-GTT--T-TCGTTCAAGTCAAATGTGGAAATTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381802 107 - 5030052 CTAAACAACAG-------AAC--------GCGCACCTGCTGGAAATCCTGGGCAAGCTCTGGAAA-TGTGTGGCATTGTCTTGCAAA-TAAGCT-GTT--T-TTGTTCAAGTCAAATGTGGAAATTAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499197 122 - 93316391 GTGAACAACAACCACAAGAAAACCAAAACAAGCAGATGTTACAAATGCTGGACAAGCTCTGGAAA-CGTGTTGTGCCGTCTTGCAAA-GAAGCT-GTT--T-TTGTTCAAGTCAAAGATGGAAATTAG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11224727 111 - 11315646 CTAAGCACTAATGGCAGCAAA--------AAGCAAACGTCACAAGACCTGGACAGGCTCTGGGAA------TGTGCTATCCTGCAAA-TAAACT-GTTGGT-TTATTCAAGTCAAATATGAAAATTAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86575391 103 - 129401213 ---AACAGCAA-------AAC------------AGATGTTACAAATACTGAACAATTTTTGGCCATTTTACTGTACCATATTACACATAAAGCTGGTT--T-TTGTTCAGATAGAATATGAATATTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16942445 104 - 59632846 CTAAATAATAA------------------AAGCAGATGTTACAAAATCTGGGCAAGATCTGGGAA-TGTATTGGACTATCTTACAAA-TAAGCT-GGT--G-TTGTTCAAATCAAATATGAAAATCAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437343 104 - 2520184 TTAAACAATAA-------AAA-----------CAGATGTCA-AAATTGTGAACTAGTTCTAGAAA-TGTGTTGGATTGCCTTGCAAG-AAAGAT-GTT--TATTGTTCAAATCAAATATGAAGATAAG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3939313 16904 + 3993831 T a score=340213.000000 s hg38.chr4_KI270789v1_alt 95952 18 + 205944 TTTAGAAACTTCATTTTA s panTro5.chr4 192887597 18 + 194502333 TTTAGAAACTTCATTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771421 18 + 195804263 TTTAGAAACTTCATTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807843 18 + 4876863 TTTAGAAACTTCATTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697389 18 + 115148730 TTTAGAAACTTCATTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979319 18 + 190429646 TTTAGAAACTTCATTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922078 18 + 189454096 TTTAGAAACTTCATTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309647 18 - 25927173 TTTAGAAACTTCATTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343222 18 + 4669795 TTTAGAAACTTCATTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301590 18 + 135778131 TTTAGAAACTTCATTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2739599 18 - 2847728 TTTAGAAACTTCATTTTA i manLeu1.NW_012102221v1 C 0 I 12561 s colAng1.NW_012116221v1 869001 18 + 2368649 TTTAGAAACTTCATTTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602592 18 - 190850796 TTTAGGAACTTCATGTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091502 18 - 14256875 TTTAGAAACTTCATTTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987131 18 - 2196201 TTTAGAAACTTCATTTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381909 18 - 5030052 TTTAGAAACTTCATTTTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499319 18 - 93316391 TTTAAAAACTTCATTTTA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3922409 18 + 3993831 TTTAAAAACTTCATTTTA i proCoq1.NW_012145301v1 T 16904 C 0 s otoGar3.GL873580 11224838 18 - 11315646 TTTAAAAACTTCATTTTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86575494 18 - 129401213 TTTTAAAACTTCCTTTTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16942549 18 - 59632846 TTTTAAAACTTCATTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437447 18 - 2520184 TTTTGAAATTTCATTTAA i dasNov3.JH570353 C 0 C 0 a score=1675776.000000 s hg38.chr4_KI270789v1_alt 95970 109 + 205944 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTTATATATTTTATTGAAGCATTCA s panTro5.chr4 192887615 109 + 194502333 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTGCCTTTTCTCAACTCCCTTGAGTTATATATTTTATTGAAGCATTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771439 109 + 195804263 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTGCCTTTTCTCAACTCCCTTGAGTTATATATTTTATTGAAGCATTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807861 109 + 4876863 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTTATATATTTTATTGAAGCATTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697407 109 + 115148730 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTTATATATTTTATTGAAGCATTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979337 109 + 190429646 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATACATTTGTTTGAAGCATTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922096 109 + 189454096 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATACATTTGTTTGAAGCATTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309665 109 - 25927173 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATACATTTTTTTGAAGCATTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343240 109 + 4669795 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATATATTTTTTTGAAGCATTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301608 109 + 135778131 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATATATTTTTTTGAAGCATTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752178 109 - 2847728 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTAATGTCCTTTTCTAACAGTCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATATATTTTTTTGAAGCATTCA i manLeu1.NW_012102221v1 I 12561 C 0 s colAng1.NW_012116221v1 869019 109 + 2368649 ATATATAAT-----TCTGATTTCAGTGTTACCAGTAAATATTATTGTCCTTTCCTAACAGCCT-----TAATTTCCTTTTCTCAACTCCCTTGAGTGATATATTTTTTTGAAGCATTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602610 109 - 190850796 ATATATAAT-----TCTGATCTAAGTGTTACCAATAAATATCAATGCCCTTTCACAACGGTCC-----TAATTTCATTTTCTCAGCTCCCTTGACTGACACATTTCACGGAAGCATGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091520 109 - 14256875 GTATATAAT-----TCTGATGTAAGTGTTACCAATAAGTATCAGTGCCCTTTCCTAACAGTCC-----TCATTTCATTATCTCAGCTCCCTTGACTGACACATTTCACTGAAGCATTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987149 114 - 2196201 ATATATAATTCTGATCTGATCTAAGTGTTACCAGTAAATATCAATACGCTTTCCTAACAGTCC-----TAATTTCATTTTCTCAGCTCCCTTGACTGACACATTTCACTGAAGCATTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3381927 109 - 5030052 ATATATAGT-----TCTGATCTAAGTGTTACCAATAAATACCAATACCCTTTCCTGACAGTCC-----TAATTTCCTTTTCTCAACTCCCTTGACTGACGCATTTCACTGAAGCATTCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499337 114 - 93316391 ATATACAAT-----TCTGATTTAAGTGTTACCAATAAATATTAATGCTCTTTTTTAACAGTCTTAGACTAACTTCTTTTTCTCAACCCCCTTGACTGATATATTTTATTGAAGCATTCA i micMur3.chr14 C 0 I 134 s proCoq1.NW_012145301v1 3922427 114 + 3993831 ATATACAAT-----TCTGATTTAAGTGTTACCAATAAATATTAATGCCCTTTTCTAACAGTCTTAGACTAACATCTTTTTCTCAACCCCTTTGACTGATATATTTTATTGAAGAATTCA i proCoq1.NW_012145301v1 C 0 I 1875 s otoGar3.GL873580 11224856 109 - 11315646 ATATATGAT-----TCTGATTTAAGTGTTATCAATAAATATTAATGACATTTTCCAACAGTCT-----TAACTTGCTTTTTTCAATTCCCTTGACTGATATATGTGATTGAAGTATTTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86575512 103 - 129401213 GTGTGAGGT-----TCTGA--CAAACTCTGTCAATAAATATTAGTGTTACACTCT----GTTT-----AAAATTTCTTTTCTGAGCATCCATCACCCATGTATCATCTTGAAGCATCCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16942567 104 - 59632846 ATATACATT-----TCGGATTTGAGTGTTGCCAATAAACATTAGCACATTTTACTACCAGTCT-----TAGTTTTCTTTCTGCAACTCCCTTAA-TTATATATTTCACTGAAGCA---- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437465 109 - 2520184 ATATACAAT-----TCTGATCTGCATGTTACCAATAAATATTAATATCCTTCTCTGACAGTCA-----TAGTTTACTTTTTTCAACTCCCTTAACTAATATATTTTATTGATGCATTCA i dasNov3.JH570353 C 0 C 0 a score=379981.000000 s hg38.chr4_KI270789v1_alt 96079 40 + 205944 TTTACCATCAAGAGAAAAGAA-----TGACA------TAAGCATGTGTGCT s panTro5.chr4 192887724 40 + 194502333 TTTACCATCAAGAGAAAAAAA-----TGACA------TAACCATGTGTGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771548 40 + 195804263 TTTACCATCAAGAGAAAAAAA-----TGACA------TAACCATGTGTGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3807970 40 + 4876863 TTTACCATCAAGAGAAAAAAA-----TGACA------TAACCATGTGTGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697516 39 + 115148730 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCATGTGTACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979446 39 + 190429646 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCACGTGTACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922205 39 + 189454096 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCACGTGTACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309774 39 - 25927173 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCACGTGTACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343349 39 + 4669795 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCACGTGTACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301717 39 + 135778131 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCATGTGTACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752287 39 - 2847728 TTTACCATCAAGAGAAAA-AA-----TAACA------TAACCACGTGTACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869128 39 + 2368649 TTTACCATCAAGAGAAGA-AA-----TAACA------TAACCACGTGTACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189602719 39 - 190850796 TTTGCCATCAAGAGGAAA-GA-----TGATA------TAAGCATGCATATT i calJac3.chr3 C 0 I 311 s saiBol1.JH378165 13091629 39 - 14256875 TTTGCCATCAAGAGGAAA-AA-----TAATA------TAAGCATGCATACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987263 39 - 2196201 TTTGCCATCAAGAGGAAA-AA-----TAACA------TAAGCATGTACACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382036 39 - 5030052 TTTGCCATCAAGAGGAAA-AG-----GAATA------TAAGCATGCATATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11224965 42 - 11315646 -CTACTCTCAAGAGAAAA-AA-----GAACATA--ATTAACTATGTACACA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86575615 39 - 129401213 -TTGTTATCAAGAGGGAAAAA-----TGGTG------TAATTTAGTATGGA i mm10.chr8 C 0 I 4 s canFam3.chr16 16942671 42 - 59632846 -TTGTTATTGGGAGAAGG-AAGATTCCAATA-------AACTGTGTGTACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437574 42 - 2520184 -CTGGTATCGAGAGAAAA-AA-----AAGAAAACTATTAGACATATGTG-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499451 134 - 93316391 I a score=920529.000000 s hg38.chr4_KI270789v1_alt 96119 96 + 205944 GAAACGTGCGGCTTCCAGGCCACAGAGTTAAGGAAGCTACATTTGTTCT--------C----CCAGCCCCTTACTTGTGCTATGCA------TT--TAGAAAGAAAAC---------------------TTTCGACG- s panTro5.chr4 192887764 95 + 194502333 GAAATGTACGGCTTCCAGGCCAAAGAGTTAAGGAAAC-AAATTTGTTCT--------C----CCCCCCGCTTACTTGTGCTATGCA------TT--TAGAAAGAAAAC---------------------TTTCGACA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771588 95 + 195804263 GAAATGTACGGCTTCCAGGCCAAAGAGTTAAGGAAAC-AAATTTGTTCT--------C----CCCCCCGCTTACTTGTGCTATGCA------TT--TAGAAAGAAAAC---------------------TTTCGACA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808010 95 + 4876863 GAAATGTACGGCTTCCAGGCCAAAGAGTTAAGGAAAC-AAATTTGTTCT--------C----CCCCCGCCTTACTTGTGCTATGCA------TT--TAGAAAGAAAAC---------------------TTTCGACG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697555 96 + 115148730 GAAATGTATGGCTTACAGGCCAAAGAGTTAAGGAAACTAAATTTGTTCT--------C----CCACCCCCTTACTTGTGCTATGCA------CT--TAAAAAGAAAAC---------------------TTTCAAAG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979485 96 + 190429646 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTACTCGTGCCATGCA------CT--CACAAAGAAAAC---------------------TTTCGAAG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922244 96 + 189454096 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTACTCGTGCCATGCA------CT--CACAAAGAAAAC---------------------TTTCGAAG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309813 96 - 25927173 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTACTCGTGCCATGCA------CC--CAAAAAGAAAAC---------------------TTTCGAAG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343388 96 + 4669795 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTAGTCGTGCCATGCA------CT--TACAAAGAAAAC---------------------TTTCGAAG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301756 96 + 135778131 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTACTCGTGCCATGCA------CT--TACAAAGAAAAC---------------------TTTCGAAG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752326 96 - 2847728 GAAATGTATGGCTTACAGGCCAAAGAGTTACAGAAACTAAACTTGTTCT--------C----CCACTCCTTTAGTCGTGCCATGCA------CT--TACAAAGAAAAC---------------------TTTCGAAG- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869167 96 + 2368649 GAAATGTATGGCTTACAGGCCAAAGAGTTACGGAAACTAAACTTGTTCT--------C----CCACTCCTTTACTCGTGCCATGCA------CT--TAAAAAGAAAAC---------------------TTTCGAAG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603069 90 - 190850796 gaaaTGTATGGCTTACAGGCCAAGGAGTCAAGGATGCTAAACTTGTTCT--------C----CTACCCCCTTACTTGTGTTCTGCA------CT--TAAAAAGAA---------------------------AGAAG- i calJac3.chr3 I 311 C 0 s saiBol1.JH378165 13091668 96 - 14256875 GAAATGTACGGCTTACAGGCCAAGGCGGTAAGTAAACTAAATTTGTTCT--------C----CTACCCCCATACTTGTGCTCTGCA------CT--TAAAAAGAAAAC---------------------TTTAGAAG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987302 98 - 2196201 GAAATGTATGGCGTACAGGCCAAGGAGTTAAGGAAACTAAATTTGTTCT--------C----CTACCCCCTTACTGGTGCTCTGCA------CTTATAAAAAGAAAAC---------------------TTTAGAAG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382075 96 - 5030052 GAAATGTATGGCTTACAGGCCAAGGAGTTAAGGAAACTCAATTTGTTCT--------C----CTATCCACTTACTTGTGCTCTGCA------CT--TAAAAGGAAAAC---------------------TTTAGAAG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225007 98 - 11315646 GAAACATGTGGC-CATAGGCCATGAAGGTAAGAAAACTACTTTTGTTTTATTTTTTCC----CTCCCTCCTTTCTTGTAATATGGG------CT--CAGTAA-----T---------------------TTTTAGAG- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86575658 84 - 129401213 ----------GACTATAAGCCAAACAGTCAATGAAATTAAATTTGTGTC--------CCATTCTCCCTCTTTCCTTGTGGTATAGA------TT--TCCATA---------------------------TTTCCAAA- i mm10.chr8 I 4 I 1 s canFam3.chr16 16942713 120 - 59632846 GAAATGCATGGC-CATAGGCCAAGAAGTTAAGTAAATTAATCTGTTTTT--------T----C--CCTCCTTCCTTGTGCTATATAGTCTTCTT--TAATTTTGAAACTCTATTGTTCTTACTTTTTTATTTTGAAA- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1437616 91 - 2520184 GAAATTTATGGC-CACAAGCCAAGAAGTTAAGGAAACTGAATCTGTTCT--------T----TTTCCTTTTTCCTTGTGCTATGGG------TT--TCTTTAA--------------------------TTTTAAAAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499451 134 - 93316391 I a score=399365.000000 s hg38.chr4_KI270789v1_alt 96215 28 + 205944 TCTATTGTTCTTACT---TTTACAATTTATG s panTro5.chr4 192887859 28 + 194502333 TCTGTTGTTCTTACT---TTTACAGTTTATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771683 28 + 195804263 TCTGTTGTTCTGACT---TTTACAGTTTATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808105 28 + 4876863 TCTGTTGTTCTGACT---TTTACAGTTTATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697651 28 + 115148730 TCTACTGTTCTTACT---TTTACAATTTATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979581 28 + 190429646 TCTATTGTTCTTACT---TTTACAATTTATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922340 28 + 189454096 TCTATTGTTCTTACT---TTTACAATTTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309909 28 - 25927173 TCTATTGTTCTTACT---TTTACAATTTATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343484 28 + 4669795 TCTATTGTTCTTTCT---TTTACAATTTATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301852 28 + 135778131 TCTATTGTTCTTACT---TTTACAATTTATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752422 28 - 2847728 TCTATTGTTCTTACT---TTTACAATTTATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869263 28 + 2368649 TCTGTTGTCCTTACT---TTTACAATTTATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603159 28 - 190850796 TCTGTTGCTCCCAGG---TTTACAATTTATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091764 28 - 14256875 TCTGTTGTTCCTGCG---TTTACAATTTATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987400 28 - 2196201 TCTGTCGTTCCTACG---TTTACAATTTACG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382171 28 - 5030052 TCTGTTGTTCCTGCT---TTTACAATTTATG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499585 28 - 93316391 TCTATTGTTCTTACT---TTTATAATTTATG i micMur3.chr14 I 134 I 75 s otoGar3.GL873580 11225106 28 - 11315646 CCCATTGTTCTTACT---TTTATAATTTACA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86575743 28 - 129401213 TCAATTATTATTTCA---TTTGCCATTTATA i mm10.chr8 I 1 C 0 s canFam3.chr16 16942834 31 - 59632846 TCTATTGTTCTTACTTACTTCATAGTTTATG i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1437707 28 - 2520184 TCTGTTGTTCTTACA---GTCACCACTTATG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I a score=525026.000000 s hg38.chr4_KI270789v1_alt 96243 44 + 205944 ATGTAGTTAATCCTATTCACCTTGTGTACTGAGGTAGGTCAGAA s panTro5.chr4 192887887 44 + 194502333 ATGTAGTTAATCCTATTCACCCTGTGTACTGAGGTAGGTCAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771711 44 + 195804263 ATGTAGTTAATCCTATTCACCCTGTGTACTGAGGTAGGTCAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808133 44 + 4876863 ATGTAGTTAATCCTATTCACCTTGTGTACTGAGGTAGGTCAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697679 44 + 115148730 ATGTAGTGAATCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979609 44 + 190429646 ATGTAGTTAGCCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922368 44 + 189454096 ATGTAGTTAGCCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309937 44 - 25927173 ATGTAGTTAGCCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343512 44 + 4669795 ATGTAGTTAACCCTATTCACATTATGTACTGAGGTAGGTCAGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301880 44 + 135778131 ATGTAGTTAACCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752450 44 - 2847728 ATGCAGTTAACCCTATTCACATTGTGTACTGAGGTAGGTCAGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869291 44 + 2368649 ATATAGTTAACCCTATTCACATTGTGTACTGAGATAGGTCAGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603187 44 - 190850796 ATGTAGTTAACCCTGTTCACATTCTGCACTGAGGTAGGTCAGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13091792 44 - 14256875 CTGTAGTTAACCCTGTTCACATTCTGCACTGAGGTAGGTCAGAA i saiBol1.JH378165 C 0 I 448 s cebCap1.NW_016107886v1 987428 44 - 2196201 ATGTAGTTAACCCTGTTCACATTCGGCACTGAGGTAGGTCAGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382199 44 - 5030052 ATGTAGTTAACTCTGTTCACATTCTGCACTGAGGCAGGTCAGAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225134 32 - 11315646 ATGAGG---ACCTTATTTATATTCTGT---------GGTCAGAA i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86575771 43 - 129401213 ATGTCACCAGCCATATTTACACCCTGCAGTGCAGAAGA-CAGAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16942865 44 - 59632846 ATGTAGTTAATTCTATGTATATTCTGTAGCAAAGTCGACCAGGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437735 44 - 2520184 ATATAGTTAACTATATGTACATGCCGTAGGGAGGTAGGTCGGGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499613 75 - 93316391 I a score=455972.000000 s hg38.chr4_KI270789v1_alt 96287 49 + 205944 ---TTTCTTCTCACCCTTTTCCTCTTCTAACATGACCTGTTCTTTCGCATCA s panTro5.chr4 192887931 49 + 194502333 ---TTTCTTCTCACCCTTTTCCTCTTCTAACATGACCTGTTCTTTTGCATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771755 49 + 195804263 ---TTTCTTCTCACCCTTTTCCTCTTCTAACATGACCTGTTCTTTTGCATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808177 49 + 4876863 ---TTTCTTCTCACCCTTTTCCTCTTCTAACATGACCTGTTCTTTTGCATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697723 49 + 115148730 ---TTTCTTCTCACCCTTTTCCTCTTCTAACATGACCTGTTCTTTTGCATCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979653 49 + 190429646 ---TTTCTTCTCACACTTTTCCCCTTCTAACATGACCTGTTCTTTTGCATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922412 49 + 189454096 ---TTTCTTCTCACACTTTTCCCCTTCTAACATGACCTGTTCTTTTGCATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24309981 49 - 25927173 ---TTTCTTCTCACACTTTTCCCCTTCTAACATGACCTGTTCTTTTGCATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343556 49 + 4669795 ---TTTCTTCTCACCCTTTTCCCCTTCTAACGTGATCTGTTCTTTTGTATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301924 49 + 135778131 ---TTTCTTCTCACCCTTTTCCCCTTCTAATGTGACCTGTTCTTTTGCATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752494 49 - 2847728 ---TTTCTTCTCACCCTTTTCCCCTTCTAACGTGATCTGTTCTTTTGTATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869335 49 + 2368649 ---TTTCTTCTCACCCTTTTCCCCTTCTAACATGACCTGTTCTTTTGCATCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603231 46 - 190850796 ---TTTCTTCTCATCC---TCCCTTCCTATCGTGACCTGTTCTTTTGCATCA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 987472 46 - 2196201 ---TTTCTTCTCATCC---TCCCCTCCTACCATGACCTGTTCTTTTGCATCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382243 46 - 5030052 ---TTTCTTCTCATCC---TCCCCTCCCATCATGACCTGTTCTTTTGCATCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225169 48 - 11315646 ---GGTCATCCCACCC-CTTCTCCTTCACCCACAACACAGCCTTGTGTGTAC i otoGar3.GL873580 I 3 C 0 s mm10.chr8 86575814 44 - 129401213 -----TTTTCCTACCT---CCCTTTTCCAACATGGCCTGCCTTTTAATGACT i mm10.chr8 C 0 C 0 s canFam3.chr16 16942909 47 - 59632846 -----TTTTCTCATTCTACATCTCTTTTACTATGATCTGTACTTTTGTATCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1437779 50 - 2520184 TATTCTTTGCTTACCCATGTCC--TTCTGCCATGACCTCTCTTTTGATGAGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499613 75 - 93316391 I e saiBol1.JH378165 13091836 448 - 14256875 I a score=1101446.000000 s hg38.chr4_KI270789v1_alt 96336 96 + 205944 TGAGTCATAGAAATGTAAGCTAATACATAAAGTTTTTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT s panTro5.chr4 192887980 96 + 194502333 TGAGTCATAGAAATGTAAGCTAATACATAAAGTTTTTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771804 96 + 195804263 TGAGTCATAGAAATGTAAGCTAATACATAAAGTTTTTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808226 96 + 4876863 TGAGTCATAGAAATGTAAGCTAATACATAAAGTTTTTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697772 96 + 115148730 TGAGTCATAGAAATGTAAGCTAATACATAAAGTTTTTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979702 96 + 190429646 TGAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922461 96 + 189454096 TGAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310030 96 - 25927173 TGAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343605 96 + 4669795 TAAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATACCCTGAGGTTGTGC-TATAAGGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134301973 97 + 135778131 TGAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAAGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGCTTATAAGGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752543 96 - 2847728 TAAGTCATAGAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATACCCTGAGGTTGTGC-TATGAGGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869384 96 + 2368649 TGAGTCATACAAATGTAAGCTAATACATAAGGTTTCTGAAAAGATGAGGAAAGAGCCAGAGAAATAATAATGCCCTGAGGTTGTGC-TATAAGGTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603277 79 - 190850796 TGAGTCACAGAAATGTAAACTAATAAATAAGCCTTTT-----------------GCCAGAGGGATAGTAATACCCTGAGGTTGTGC-TGTAAGGTGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 987518 79 - 2196201 TGACTCATAGAAACATAAACTAATAAATAAGGTTTTT-----------------GCCAGAGGGATAATAATACCCTGAGGTTGTGC-TGTAAGGTAT i cebCap1.NW_016107886v1 C 0 I 305 s aotNan1.NW_018492112v1 3382289 78 - 5030052 TGAGTCATAGAAATGTAAACTAATAAGTAAGGTTTTT-----------------GCCAGAGGGATAATAATACCCTGAGGTTGTGC-TGTAAGGTA- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499688 92 - 93316391 TGAGTCATAGAAATTTAAGCTAATAAA----GTATTTGAAAAGATGAGGAAAAAGCGGGAGAGATGCTAATGCCCTGAGGTTCTGC-TGTAAGTTAT i micMur3.chr14 I 75 I 1 s otoGar3.GL873580 11225217 96 - 11315646 TGAATCATCGAAATTTAAGCTAATAAATAAGGTGCTTGAAAAGATGAAGACAGAGACACAGATGTAAGAATGCCCTGACGTTCTGC-TATAAGTTAT i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86575858 91 - 129401213 GCCATCACAGAAGTCTAAACAAAGAC----GGTGTTTAAAATTATGAAGAAAAA-CTACAGATCAGATAATGTCTTGAGGTTGTGC-TGTACATTTT i mm10.chr8 C 0 I 1 s canFam3.chr16 16942956 93 - 59632846 TTAGTTACAGATATCTAGGGTAATAAATAAGGTTATTGAAAAGATGAAGAAAGAGATACAGAAATAATAATGTCCTGAAATAG----TCTAAGTTTC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1437829 96 - 2520184 TGAACCCTAGATATATGGGCTAATAAAAAAGATGCTTGAAAAGATGAGGAAGGAACTGGAAAGCGGACGATGCCCTGGGGTTGTGC-TGTAAGTTAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e saiBol1.JH378165 13091836 448 - 14256875 I a score=-6674.000000 s hg38.chr4_KI270789v1_alt 96432 2 + 205944 -GT s panTro5.chr4 192888076 2 + 194502333 -GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771900 2 + 195804263 -GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808322 2 + 4876863 -GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697868 2 + 115148730 -GT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979798 2 + 190429646 -GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922557 2 + 189454096 -GT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310126 2 - 25927173 -GT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343701 2 + 4669795 -GT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302070 2 + 135778131 -GT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752639 2 - 2847728 -GT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869480 2 + 2368649 -GT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17499781 1 - 93316391 -G- i micMur3.chr14 I 1 C 0 s otoGar3.GL873580 11225314 1 - 11315646 -G- i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86575950 1 - 129401213 -G- i mm10.chr8 I 1 C 0 s canFam3.chr16 16943050 1 - 59632846 -G- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1437925 2 - 2520184 GG- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189603356 0 - 190850796 C e cebCap1.NW_016107886v1 987597 305 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e aotNan1.NW_018492112v1 3382367 0 - 5030052 C e saiBol1.JH378165 13091836 448 - 14256875 I a score=189947.000000 s hg38.chr4_KI270789v1_alt 96434 23 + 205944 TCCACATTGGCAAGA---A---GTCCCTT---- s panTro5.chr4 192888078 23 + 194502333 TCCACATTGGCAAGA---A---GTCCCTT---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771902 23 + 195804263 TCCACATTGGCAAGA---A---GTCCCTT---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808324 23 + 4876863 TCCACATTGGCAAGA---A---GTCCCTT---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697870 23 + 115148730 TCCACATTGGCAAGA---A---GTCCTTT---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979800 23 + 190429646 TCCACATTGGCAGGA---A---CTCCTTT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922559 23 + 189454096 TCCACATTGGCAGGA---A---CTCCTTT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310128 23 - 25927173 TCCACATTGGCAGGA---A---CTCCTTT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343703 23 + 4669795 ACCACATTGGCAGGA---A---CTCCTTT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302072 23 + 135778131 TCTACATTGGCAAGA---A---CTGCTTT---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752641 23 - 2847728 TCCACATTGGCAGGA---A---CTCCTTT---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869482 23 + 2368649 TCCACATTGGCAAGA---A---CTCCTTT---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603356 22 - 190850796 -CCACATTGGCAAAC---A---GTCCTTT---- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 987902 23 - 2196201 TCCACACTAGCAGAA---A---GTCCTTT---- i cebCap1.NW_016107886v1 I 305 C 0 s aotNan1.NW_018492112v1 3382367 23 - 5030052 TCCACGTTGGCAAAA---A---GTCCTTT---- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499782 23 - 93316391 TCAATATTAGCAAGA---G---GTTTCTT---- i micMur3.chr14 C 0 I 1 s otoGar3.GL873580 11225315 26 - 11315646 GCAATATGAGCAAGA---GGAAGTTCCTT---- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86575951 19 - 129401213 TCAAAGCTTATAAAA---G---AAA-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16943051 26 - 59632846 TCAATATCAGGAAGAGGGA---GTCTCTT---- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1437927 27 - 2520184 TCAGTCTCAGCAGGA---G---GACGTTGCTTG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e saiBol1.JH378165 13091836 448 - 14256875 I a score=708425.000000 s hg38.chr4_KI270789v1_alt 96457 52 + 205944 GCTTGGTAGATGTGTTCCTGTAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA s panTro5.chr4 192888101 52 + 194502333 GCTTGGTAGATGTGTTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771925 52 + 195804263 GCTTGGTAGATGTGTTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808347 52 + 4876863 GCTTGGTAGATGTGTTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697893 51 + 115148730 GCTTGGTAGATGTGTTCCTATAAG-CCTAAAAGAAAGGGCAGGTGGCCGTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979823 52 + 190429646 GCTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922582 52 + 189454096 GCTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310151 52 - 25927173 ACTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343726 52 + 4669795 GCTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302095 52 + 135778131 GCTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752664 52 - 2847728 GCTTGGTAGATGCGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869505 52 + 2368649 GCTTGGTAGATGTGCTCCTATAAGCCCTAAAAGAAAGGGCAGGTGGCTGTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603378 52 - 190850796 GCTTGGTAGATGTGTTCTTATAAGCCTTAAAAGAAAGGGCAGATGGCTGTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092284 52 - 14256875 gccTGGTAGATGTGTTCTTATAAGCCTGAAAAGAAAGGGCAGATGGTTGTCA i saiBol1.JH378165 I 448 C 0 s cebCap1.NW_016107886v1 987925 51 - 2196201 GCTTGGTAGGTGTGTTCTTATACG-CTTAAAAGAAAGGGCAGATGGCTGTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382390 52 - 5030052 GCTTGGTAGATGTGTTCTTATAAGCCTTAAAAGAAAGGGCAGATGGCTTTCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17499806 52 - 93316391 GCTCAGTAGATGTGTTCCCATAAGCTTCAAAGGGAAGGACAGATGGCTGTCA i micMur3.chr14 I 1 I 52 s otoGar3.GL873580 11225342 50 - 11315646 GCTCCGTAAATATG-TCCTAGGAGTTTCAAA-GGCAGGGTAGATGGCTCTCG i otoGar3.GL873580 I 1 I 2 s mm10.chr8 86575970 44 - 129401213 GTTTGGTGACTGTGTTGCTACACGCTCTAAT-------Gcag-tggctctca i mm10.chr8 C 0 C 0 s canFam3.chr16 16943078 51 - 59632846 GCTTGGTAGATGTGTCCTTGTAAGTTTTAAA-GGAAGAGCAGATGACTATCA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1437954 51 - 2520184 GCCTGGTGGTTCTGTTTGTAGATGCTTTAAGGGGAAGAGTGGATGG-TGTCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I a score=80368.000000 s hg38.chr4_KI270789v1_alt 96509 8 + 205944 TACTCCCC-- s panTro5.chr4 192888153 8 + 194502333 TATTCCCC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771977 8 + 195804263 TATTCCCC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808399 8 + 4876863 TACTCCCC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697944 8 + 115148730 TACTCCCC-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979875 8 + 190429646 TACTCCCC-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922634 8 + 189454096 TACTCCCC-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310203 8 - 25927173 TACTCCCC-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343778 8 + 4669795 TACTCCCC-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302147 8 + 135778131 TACTCCCC-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752716 8 - 2847728 TACTCCCC-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869557 8 + 2368649 TACTCCCC-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603430 8 - 190850796 ATCTCCCC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092336 8 - 14256875 TTCACCCC-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987976 8 - 2196201 TTCTCCCC-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382442 8 - 5030052 TTCTCCCC-- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225394 8 - 11315646 CTCTCCCC-- i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86576014 8 - 129401213 gccttccc-- i mm10.chr8 C 0 I 9452 s canFam3.chr16 16943129 8 - 59632846 CATTGTCA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1438005 10 - 2520184 TGCTCTCCCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499858 52 - 93316391 I a score=410427.000000 s hg38.chr4_KI270789v1_alt 96517 43 + 205944 TTATCCTCCGGACACAATCACCTG---AGACC---ATTCACTAGGCCTT s panTro5.chr4 192888161 43 + 194502333 TTATCCTCTGGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192771985 43 + 195804263 TTATCCTCTGGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808407 43 + 4876863 TTATCCTCCGGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697952 43 + 115148730 TCACCCTCCGGACACAATCACCTG---AGACG---ATTCACTAGGCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979883 43 + 190429646 TTATCCTCCAGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922642 43 + 189454096 TTATCCTCCAGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310211 43 - 25927173 TTATCCTCCAGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343786 43 + 4669795 TTATCCTTCAGACACAATCACCTG---AGACC---ATTCAGTAGGCCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302155 43 + 135778131 TTATCCTCCAGACACAATCACCTG---AGACC---ATTCCCTAGGCCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752724 43 - 2847728 TTATCCTCCAGACACAATCACCTG---AGACC---ATTCACTAGGCCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869565 43 + 2368649 TTATCCCCCAGACACAATCACCTG---AGACC---ATTCAGTAGGCCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603438 43 - 190850796 TCATTCTATGGACACAACCTCCTG---AGACC---ATTCACTAGGCCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092344 43 - 14256875 TTAATCTCTGGACACAGTCGCCTG---AGACC---ATTCACTAGGCCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 987984 43 - 2196201 TTAATCTCTGGACACAATCTCCTG---AGACC---ATTCACTAAACCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382450 43 - 5030052 TTATTCTGTGGACACAATCTCCTG---AGACC---ATTCACTAGACCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225402 33 - 11315646 TTAACTTCAGGACACAAAGGTCTA---AAACC---ATCT---------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943137 35 - 59632846 ---------TGACATGA--GGTTG---AAAGCCATATTCTTTTAGGTTT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1438015 45 - 2520184 TTACTCTCAGAATTTGAAGGCCTGGAAAGATC---TTTTCTAAGACCA- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17499858 52 - 93316391 I e mm10.chr8 86576022 9452 - 129401213 I a score=757588.000000 s hg38.chr4_KI270789v1_alt 96560 63 + 205944 CCAAGGGGAAGCCC----AGGTGA-------AACTGAAGGACAACCC-TTCTGAGATGGACAGAAAAAGAAAAAC s panTro5.chr4 192888204 63 + 194502333 CCTAGGGGAAGCCC----AGGCAA-------AACTGAAGGACAAGCC-TGCTGAGATGGGCAGAAAAAGAAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772028 63 + 195804263 CCTAGGGGAAGCCC----AGGCAA-------AACTGAAGGACAAGCC-TGCTGAGATGGGCAGAAAAAGAAAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808450 63 + 4876863 CCAAGGGGAAGCCC----AGGTGA-------AACTGAAGGACAACCC-TTCTGAGATGGACAGAAAAGGAAAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112697995 63 + 115148730 CCCACGGAAAGCCC----AGGTGA-------AACTGAAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979926 63 + 190429646 CCAAGGGGAAGCCC----AGGTGA-------AACTGAAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922685 63 + 189454096 CCAAGGGGAAGCCC----AGGCGA-------AACTGAAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310254 63 - 25927173 CCAAGGGGAAGCCC----AGGCGA-------AACTGAAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343829 63 + 4669795 CCAAGGGGAAGCCC----TGGCGA-------AACTGAAGGACAAGGC-TTCTGAGATGGACAGAAAAAGAAAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302198 63 + 135778131 CCAAGGGGAAGCCC----AGGCGA-------AACTGAAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752767 63 - 2847728 CCAAGGGGAAGCCC----AGGCGA-------AACTGAAGGACAAGGC-TTCTGAGATGGACAGAAAAAGAAAAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869608 63 + 2368649 CCAAGGGGAAGCCC----AGGTGA-------AACTGAAGGACAGACC-TTCTGAGATGGACAGAAAAAGAAAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603481 70 - 190850796 CCAAGGGAAAGCCT----GGGGGGACTTTCAGACTGAAGGACAGGAC-TTCTGAGATGGATAGAAAAAGAAAAAC i calJac3.chr3 C 0 I 97 s saiBol1.JH378165 13092387 69 - 14256875 CCAAGGGGAAGCCT----GGGGGG-CTTTCAGACCGAAGGACAAGAC-TTCTGAGATGGACAGAAAAAGAAAAAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988027 69 - 2196201 CCAAGGGGAAGTCT----GGGGGG-CTTTCAAACTGGAGGACAAGCC-TTCTGAGATGGACAGAAAAAGAAAAAC i cebCap1.NW_016107886v1 C 0 I 105 s aotNan1.NW_018492112v1 3382493 73 - 5030052 CCAAGGGAAAGCCTGGCGGGGGGG-CTTTCAAACTGAAGGACAAGAC-TTCTGAGATGGACAGAAAAAGAAAAAC i aotNan1.NW_018492112v1 C 0 I 108 s micMur3.chr14 17499910 62 - 93316391 -CCAAGGGGAACCC----AGGTGA-------AACTGAAGGGCAAGGC-TTCCGAGGTGGGCAAAAAGAGAAACAC i micMur3.chr14 I 52 C 0 s otoGar3.GL873580 11225435 58 - 11315646 -----GGGAAAACC----AGATGC-------AACTGAAGGGCAAGAT-TTCCCAGGAGGACAAAAAGAGGAAAAC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943173 64 - 59632846 ACAAGGGAAAAACC----ATGTGA-------AATTGAATAGTAAGGCTTTCTGAGGTGGAGGAAAAGAAGAAAAA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1438060 61 - 2520184 -CCAAGTGAAGCCC----AGAAGA-------AACTGACCGACGTGCC-TTTTGAGCAGGA-GGAAAGCGAGAAGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e mm10.chr8 86576022 9452 - 129401213 I a score=57015.000000 s hg38.chr4_KI270789v1_alt 96623 6 + 205944 GTGAAA s panTro5.chr4 192888267 6 + 194502333 GTGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772091 6 + 195804263 GTGAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808513 6 + 4876863 GTGAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698058 6 + 115148730 GTGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979989 6 + 190429646 ATGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922748 6 + 189454096 ATGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310317 6 - 25927173 ATGAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343892 6 + 4669795 GTGAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302261 6 + 135778131 GTGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752830 6 - 2847728 GTGAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869671 6 + 2368649 GTGAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13092456 6 - 14256875 AAGAAA i saiBol1.JH378165 C 0 I 92 s micMur3.chr14 17499972 6 - 93316391 GTGAAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11225493 6 - 11315646 TTGAAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943237 6 - 59632846 GTGCAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1438121 5 - 2520184 -TGGAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I a score=29042.000000 s hg38.chr4_KI270789v1_alt 96629 5 + 205944 TCTTA s panTro5.chr4 192888273 5 + 194502333 TCTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772097 5 + 195804263 TCTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808519 5 + 4876863 TCTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698064 5 + 115148730 TCCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188979995 5 + 190429646 TCTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922754 5 + 189454096 TCTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310323 5 - 25927173 TCTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343898 5 + 4669795 TCTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302267 5 + 135778131 TCTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752836 5 - 2847728 TCTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869677 5 + 2368649 TCTTA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17499978 5 - 93316391 GCTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11225499 3 - 11315646 --CTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943243 5 - 59632846 CTCTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1438126 5 - 2520184 TCCTA i dasNov3.JH570353 C 0 I 11 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I a score=416240.000000 s hg38.chr4_KI270789v1_alt 96634 66 + 205944 TGGTAAGGGTAAAAGGCCAAAGAGACTTAGGAACTGTAAGGTAGGGAGGAAAGAATGTGGGAGCCC s panTro5.chr4 192888278 66 + 194502333 TGGTAAGGGTACAAGGCCAAAGAGACTTAGGAACTGTAAGGTAGGGAGGAAAGAACGTGGGAGCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772102 66 + 195804263 TGGTAAGGGTACAAGGCCAAAGAGACTTAGGAACTGTAAGGTAGGGAGGAAAGAACGTGGGAGCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808524 66 + 4876863 TGGTAAGGGTAAAAGGCCAAAGAGACTTAGGAACTGTAAGGTAGGGAGGAAAGAATGTGGGAGCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698069 65 + 115148730 TGGTAAGGGTAAAAGGCCACAGAGACTTA-GAACTGTAAGGTAGGGAGGAAGGAATGTGGGAGCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980000 66 + 190429646 TAGTAAGTGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGAGGAAAGAATGCGGGACCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922759 66 + 189454096 TAGTAAGTGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGAGGAAAGAATGCGGGAGCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310328 66 - 25927173 TAGTAAGAGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGAGGAAAGAATGCGGGAGCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343903 65 + 4669795 TAGTAAGGGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGACGAAAGAATGCTAGAG-GC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302272 65 + 135778131 TAGTAAGGGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGAGGAAAGAATGCTGGAG-GC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2752841 65 - 2847728 TAGTAAGGGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGACGAAAGAATGCTGGAG-GC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869682 66 + 2368649 TAGTAAGGGTAAAAGGCCAAAGATACTTAGGAACTGTAAGGTAGAGAGGAAAGAATGCGGGAGCCC i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17499983 66 - 93316391 TGGTGAAAGTAGAGGGCCATAGAGACCAAGGAACTGTCATGTGCAGAAGAAAGAACGTGGGAGCCC i micMur3.chr14 C 0 I 1714 s otoGar3.GL873580 11225502 50 - 11315646 TGGTGAAAGTAGAGGGTCAAAGAGACTAAAGGACCGT--------------AACACGTGGGGCC-- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943248 58 - 59632846 TGGTGACAG--------CAAAGAAACTGAGGAACTGTGAAGTGTGGGAGAAAGAAGGTAGGAGACA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I a score=402304.000000 s hg38.chr4_KI270789v1_alt 96700 70 + 205944 AGAGAGACGGGTCCTCTGTGGCCGTAACAGTAGACTTTCAGTGGAGCGAGAGAGAACATGAGGAAACTC-----A----- s panTro5.chr4 192888344 70 + 194502333 AGAGAGACGGGTCCTCTGTGGCCGTAACAGTAGACTTTCAGTGGAGCGAGAGAGAACATGAGGAAACGC-----G----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772168 70 + 195804263 AGAGAGACGGGTCCTCTGTGGCCGTAACAGTAGACTTTCAGTGGAGCGAGAGAGAACATGAGGAAACGC-----G----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808590 70 + 4876863 AGAGAGACGGGTCCTCTGTGGCCGTAACAGTAGACTTTTAGTGGAGCGAGAGAGAACATGAGGAAACTC-----A----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698134 75 + 115148730 AGAGAGACAGGCCCTCTGTGGCCGTAACAGTAGACTGTCCGTGGAGTCACAGAGAGCATGAGGAAACTCAGTCAA----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980066 70 + 190429646 AGAGAGACAGGTCCTCTGTGGCCATGACAGTAGACTTTCAGTGGAGTGATAGAGAACTTGAGGAAACTC-----A----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187922825 70 + 189454096 AGAGAGACAGGTCCTCTGTGGCCATGACAGTAGACTTTCAGTGGAGTGATAGAGAACTTGAGGAAACTC-----A----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310394 70 - 25927173 ACAGAGACaggtcctctgtggccatgacagtagactttcagtggagtgatagagaACTTGAGGAAATTC-----A----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3343968 70 + 4669795 AGAGAGACaggtcctctgtgaccatgacagtagactttcagtggagtgatagagaACTTGAGGAAACTC-----A----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302337 70 + 135778131 AGAGAGACaggtcctctgtggccatgacagtagactttcagtggagtgatagagaACTTGAGGAAACTC-----A----- i chlSab2.chr7 C 0 I 115 s manLeu1.NW_012102221v1 2752906 70 - 2847728 AGAGAGACaggtcctctgtggccatgacagtagactttcagtggagtgatagagaACTTGAGGAAACTC-----A----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 869748 70 + 2368649 AGAGAGACAGGCCCTCTGTGGCCATGACAGTAGACTTTCAGTGGAGTGATAGAGAACTTGAGGAAACTC-----A----- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11225552 69 - 11315646 ATCAGGACAGCTCCTCTGTGGTCGTTTTGGT-GCCTTACCGCAGAATGACAGACAACGTGAGAAGAATC-----A----- i otoGar3.GL873580 C 0 I 5 s canFam3.chr16 16943306 51 - 59632846 ----------ATCC--------------AAGAGAACTGCTATGGAATTACATATAACTTGAGGAAAATC-----AAGAAA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 96770 1 + 205944 G s panTro5.chr4 192888414 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772238 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808660 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698209 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980136 1 + 190429646 G i rheMac8.chr5 C 0 I 115 s macFas5.chr5 187922895 1 + 189454096 G i macFas5.chr5 C 0 I 114 s macNem1.NW_012013133v1 24310464 1 - 25927173 G i macNem1.NW_012013133v1 C 0 I 115 s cerAty1.NW_012001672v1 3344038 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 I 60 s chlSab2.chr7 134302522 1 + 135778131 G i chlSab2.chr7 I 115 C 0 s manLeu1.NW_012102221v1 2752976 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 M 4170 s colAng1.NW_012116221v1 869818 1 + 2368649 G i colAng1.NW_012116221v1 C 0 I 280 s otoGar3.GL873580 11225626 1 - 11315646 G i otoGar3.GL873580 I 5 C 0 s canFam3.chr16 16943357 1 - 59632846 G i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I a score=103380.000000 s hg38.chr4_KI270789v1_alt 96771 26 + 205944 GATATTCTGCACCATGGTTTGGACTC s panTro5.chr4 192888415 26 + 194502333 GATATTTTGCACCATGGTTTGGACTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772239 26 + 195804263 GATATTTTGCACCATGGTTTGGACTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808661 26 + 4876863 GATATTTTGCACCATGGTTTGGACTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698210 17 + 115148730 GATATTCTGCACC---------ACTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980252 25 + 190429646 GATATTTTGC-CCATGGTTTGGACCT i rheMac8.chr5 I 115 C 0 s macFas5.chr5 187923010 26 + 189454096 GATATTTTGCACCATGGTTTGGACCT i macFas5.chr5 I 114 C 0 s macNem1.NW_012013133v1 24310580 26 - 25927173 GATATTTTGCACCATGGTTTGGACCT i macNem1.NW_012013133v1 I 115 C 0 s cerAty1.NW_012001672v1 3344099 26 + 4669795 GATATTTTGCACCATGGTTTGGACTC i cerAty1.NW_012001672v1 I 60 C 0 s chlSab2.chr7 134302523 26 + 135778131 GATATTTTGCACCATGGTTTGGACTC i chlSab2.chr7 C 0 I 11 s otoGar3.GL873580 11225627 26 - 11315646 AGAATTTCCCACTGCTTTCTGGACTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943358 26 - 59632846 GGCATTTTGCACTATTTTCTAGACTC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I e colAng1.NW_012116221v1 869819 280 + 2368649 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M a score=10452.000000 s hg38.chr4_KI270789v1_alt 96797 5 + 205944 TAAAA s panTro5.chr4 192888441 5 + 194502333 TAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772265 5 + 195804263 TAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808687 5 + 4876863 TAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698227 5 + 115148730 CAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980277 5 + 190429646 CATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923036 5 + 189454096 CATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310606 5 - 25927173 CATGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344125 5 + 4669795 CATGC i cerAty1.NW_012001672v1 C 0 C 0 s otoGar3.GL873580 11225653 5 - 11315646 TATGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943384 5 - 59632846 TATGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603551 97 - 190850796 I e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e saiBol1.JH378165 13092462 92 - 14256875 I e colAng1.NW_012116221v1 869819 280 + 2368649 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e chlSab2.chr7 134302549 11 + 135778131 I a score=37053.000000 s hg38.chr4_KI270789v1_alt 96802 7 + 205944 ATGTATT s panTro5.chr4 192888446 7 + 194502333 ATGTATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772270 7 + 195804263 ATGTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808692 7 + 4876863 ATGTATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698232 7 + 115148730 ATGTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980282 7 + 190429646 ATGTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923041 7 + 189454096 ATGTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310611 7 - 25927173 ATGTATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344130 6 + 4669795 ATGTAT- i cerAty1.NW_012001672v1 C 0 C 0 s colAng1.NW_012116221v1 870099 7 + 2368649 ATGTATT i colAng1.NW_012116221v1 I 280 C 0 s calJac3.chr3 189603648 7 - 190850796 ATGTGTC i calJac3.chr3 I 97 C 0 s saiBol1.JH378165 13092554 7 - 14256875 ATGTGTC i saiBol1.JH378165 I 92 C 0 s otoGar3.GL873580 11225658 7 - 11315646 GTGACCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16943389 7 - 59632846 ATGTATT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 988096 105 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e chlSab2.chr7 134302549 11 + 135778131 I a score=23349.000000 s hg38.chr4_KI270789v1_alt 96809 5 + 205944 TGATC s panTro5.chr4 192888453 5 + 194502333 TGATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772277 5 + 195804263 TGATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808699 5 + 4876863 TGATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698239 5 + 115148730 TGATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980289 5 + 190429646 CCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923048 5 + 189454096 CCATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310618 5 - 25927173 CCATC i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 870106 5 + 2368649 CCATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603655 5 - 190850796 TGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092561 5 - 14256875 TGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988201 5 - 2196201 TGATT i cebCap1.NW_016107886v1 I 105 C 0 s otoGar3.GL873580 11225665 5 - 11315646 CGATC i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16943396 5 - 59632846 TGATT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382566 108 - 5030052 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e chlSab2.chr7 134302549 11 + 135778131 I e cerAty1.NW_012001672v1 3344136 0 + 4669795 C a score=28822.000000 s hg38.chr4_KI270789v1_alt 96814 6 + 205944 ATATGA s panTro5.chr4 192888458 6 + 194502333 ATATGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772282 6 + 195804263 ATATGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808704 6 + 4876863 ATATGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698244 6 + 115148730 ATAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980294 6 + 190429646 ATACAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923053 6 + 189454096 ATACAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310623 6 - 25927173 ATACAA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 870111 6 + 2368649 ATATGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603660 6 - 190850796 ATATGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092566 6 - 14256875 ATATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988206 6 - 2196201 ATATGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382674 6 - 5030052 ATATGG i aotNan1.NW_018492112v1 I 108 C 0 s otoGar3.GL873580 11225672 4 - 11315646 ATCT-- i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16943401 6 - 59632846 TTATAA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e chlSab2.chr7 134302549 11 + 135778131 I e cerAty1.NW_012001672v1 3344136 0 + 4669795 C a score=53963.000000 s hg38.chr4_KI270789v1_alt 96820 5 + 205944 TGGGT s panTro5.chr4 192888464 5 + 194502333 TGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772288 5 + 195804263 TGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808710 5 + 4876863 TGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698250 5 + 115148730 TGGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980300 5 + 190429646 TGGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923059 5 + 189454096 TGGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310629 5 - 25927173 TGGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344136 5 + 4669795 TGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302560 5 + 135778131 TGGGT i chlSab2.chr7 I 11 C 0 s colAng1.NW_012116221v1 870117 5 + 2368649 TGGGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603666 5 - 190850796 TGGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092572 5 - 14256875 TGGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988212 5 - 2196201 TGGGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3382680 5 - 5030052 TGGGT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11225676 5 - 11315646 TAGGT i otoGar3.GL873580 C 0 I 13 s canFam3.chr16 16943407 5 - 59632846 TAGAT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M a score=314831.000000 s hg38.chr4_KI270789v1_alt 96825 46 + 205944 TTATA-GTTTTTATTCTTGGCCTCGGTCTC---TG------TTTTTTTTTC--TTCTT s panTro5.chr4 192888469 46 + 194502333 TTATA-GCTTTTATTCTTGGTCTCGGTCTC---TG------TTTTTTTTTC--TTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772293 45 + 195804263 TTATA-GCTTTTATTCTTGGTCTCGGTCTC---TG-------TTTTTTTTC--TTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808715 43 + 4876863 TTATA-GTTTTTATTCTTGGTCTCGGCCTC---TG---------TTTTTTC--TTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698255 47 + 115148730 TTATA-GTTTTTATTCTTGGTTTCGGTCTC---TC-----TTTTCTTTTTC--TTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980305 52 + 190429646 TTATA-GTTTTTATTCTTGGTCTGGGTCTC---TTGTTTTGTTTTTTCTTC--TTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923064 52 + 189454096 TTATA-GTTTTTATTCTTGGTCTGGGTCTC---TTGTTTTGTTTTTTCTTC--TTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310634 52 - 25927173 TTATA-GTTTTTATTCTTGGTCTGGGTCTC---TTGTTTTGTTTTTTCTTC--TTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344141 54 + 4669795 TTATA-GTTTTTATTCTTGGTCTGGGTCTCTG-TTTTTTTTTTTCTTCTTC--TTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302565 55 + 135778131 TTATA-Gtttttattcttggtctgggtctctgtttttttttcttcttcttc--ttctt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870122 45 + 2368649 TTATA-GTTTTTATTCTTGGTCTGGGTCTG---TT-------TTTTTTTTC--TTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603671 50 - 190850796 TTATA-GTTTTTATTCTCGGTATAGATCTC---TG----TGTTTTTTTTTTTCTTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092577 48 - 14256875 TTATA-GTTTTTATTCTTGGTATGGATCTC---TG----TGTGTTTTTTTT--TTCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988217 46 - 2196201 TTATA-GTTTTTATTCTTGGTATGGATCTC---TG----TGTTTTTTTT----TTCTT i cebCap1.NW_016107886v1 C 0 I 680 s aotNan1.NW_018492112v1 3382685 47 - 5030052 TTATA-GTTTTTATTCTTGGTATGGATCTC---TG----TGTTTTTTTTC---TTCTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16943412 45 - 59632846 --ATGTGTTTTCTTTCCTGGTATGGGACTC---TA------CCTTTCTTCC--TTTTT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=39642.000000 s hg38.chr4_KI270789v1_alt 96871 5 + 205944 ATATG s panTro5.chr4 192888515 5 + 194502333 ATATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772338 5 + 195804263 ATATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808758 5 + 4876863 ATATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698302 5 + 115148730 ACATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980357 5 + 190429646 ATATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923116 5 + 189454096 ATATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310686 5 - 25927173 ATATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344195 5 + 4669795 ATATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302620 5 + 135778131 ATATG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870167 5 + 2368649 ATATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603721 5 - 190850796 AGATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092625 5 - 14256875 AGATG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3382732 5 - 5030052 ATATG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16943457 5 - 59632846 AAATG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=17536.000000 s hg38.chr4_KI270789v1_alt 96876 3 + 205944 TTG s panTro5.chr4 192888520 3 + 194502333 TTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772343 3 + 195804263 TTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808763 3 + 4876863 TTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698307 3 + 115148730 TTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980362 3 + 190429646 TTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923121 3 + 189454096 TTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310691 3 - 25927173 TTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344200 3 + 4669795 TTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302625 3 + 135778131 TTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870172 3 + 2368649 TTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13092630 3 - 14256875 TTA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3382737 3 - 5030052 TTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16943462 3 - 59632846 CTA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189603726 0 - 190850796 C e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=14196.000000 s hg38.chr4_KI270789v1_alt 96879 2 + 205944 TA s panTro5.chr4 192888523 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772346 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808766 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698310 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980365 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923124 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310694 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344203 2 + 4669795 TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302628 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870175 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13092633 2 - 14256875 TA i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16943465 2 - 59632846 TA i canFam3.chr16 C 0 I 598 e calJac3.chr3 189603726 0 - 190850796 C e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382740 0 - 5030052 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=2715926.000000 s hg38.chr4_KI270789v1_alt 96881 602 + 205944 Gtgttgggattcactcagatggtggcagaaatattaaagggaaatactagggaaagttatagggaatagtcacaaaccttttggaaggctgaaagtttacatagcttgtaataattgaacaggctgaggcagccggttcttaccttagagcattaggtcttagggtaaatactagggacaacagaggcttccccacttaagtctgtttaccctacctccaataactaacctttgagccagatgg-cccacttgtggggaggttgactagggatattgtcccctaatggtatttaccttagaccttggtacctgagctttaatcattcctagaactactctcttaaccatgttaattatccacaagtgtgttgactcagagcttctgttgttaattgtataccaaataaatgcctggagtgcgagctg-ctcagggccagccacagtgacaaaccactcttggtgtgcaggcggtcggacactcagcaggactggcaaagcagaatatct--gtgtcagtgtacgttttattcgcctgtcgtttgggtcagggtccatgggcagacccccgcaGCTAATGCCCTCAAGGGTGAGGAGCAATACCTCA s panTro5.chr4 192888525 602 + 194502333 Gtgttgggattcactcagatggtggcagaaatattaaagggaaatactagggaaagttatagggaatagtcacaaaccttttggaaggctgaaaggttacatagcttgtaataattgaacaggctgaggcagccggttcttaccttagagcattaggtcttagggtaaatactagggacaacagaggcttccccacttaagtctgtttaccctacctccattaactaacctttgagccagatgg-cccttttgtggggaggctgactagggatcttgccccctaatggtatttaccttagacctcggtacctgagctttactcattcctagaactactctcttaacaatgttaattatccacaagtgtgttgactcagagcttctgttgttaattgtataccaaataaatgcctggagtgccagctg-ctcagggccagccacagtgacaaaccactcttggtgtgcaggcggtcggacactcagcaggactggcaaagcagaatatct--gtgtcagtgtacgttttattcacctgtcgtttgggtcagggtctgtgggcagacccccgcaGCTAATGCCCTCAAGTGTGAGGAGCAATACCTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772348 602 + 195804263 Gtgttgggattcactcagatggtggcagaaatattaaagggaaatactagggaaagttatagggaatagtcacaaaccttttggaaggctgaaaggttacatagcttgtaataattgaacaggctgaggcagccggttcttaccttagagcattaggtcttagggtaaatactagggacaacagaggcttccccacttaagtctgtttaccctacctccattaactaacctttgagccagatgg-cccttttgtggggaggctgactagggatcttgccccctaatggtatttaccttagacctcggtacctgagctttactcattcctagaactactctcttaacaatgttaattatccacaagtgtgttgactcagagcttctgttgttaattgtataccaaataaatgcctggagtgccagctg-ctcagggccagccacagtgacaaaccactcttggtgtgcaggcggtcggacactcagcaggactggcaaagcagaatatct--gtgtcagtgtacgttttattcacctgtcgtttgggtcagggtctatgggcagacccccgcaGCTAATGCCCTCAAGTGTGAGGAGCAATACCTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3808768 602 + 4876863 Gtgttgggattcactcagatggtggcagaaatattaaagggaaatactagggaaggttatagggaatagtcacaaaccttttggaaggctgaaagattacatagcttgtaataattgaacaggctgaggcagccggttcttaccttagagcattaggtcttagggtaaatactagggacaacagaggcttccccacttaagtctgtttaccctacctccattaactaacctttgagccagatgg-cccacttgcagggaggttgactagggatattgccccctaatggtatttaccttagacctcggtacctgagctttaatcattcctagaactactctcttaaccatgttaattatccacaagtgtgttgactcagagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggccagccacagtgacaaaccactcttggtgtgcaggcggtcggacactcagcaggactggcaaagcagaatatct--gtgtcagtgtacgttttattcgcctgtcgtttgggtcagggtctatgggcagacccctgcaGCTAATGCCCTCAAGGGTGAGGAGCAATACCTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698312 591 + 115148730 Gtgttgggattcactcagatggtggcagaaatattatggggaaatatgagggaaagttatagggaatagtcacacacctttcagaaggctgaaaggttacatagcttgtaataattgaacagactgaggcagccggttcttaccttagagcattaggtcatagggtaaatactagggacaacagaggcttccccagttaagtctgtttaccccacctccattaactcacctttgagccagatgg-ccctcttgcagggaggctgactagggatattgcctcctaatggtatttaccttagacctcggtacctgagctttcatccttcctagaactactctcttaaccatgttaattatccacaagtgtgttgactcagagcttctgttgttaattgtataccaaataaatgcctggagtgcgagctgcctcagggccgg-cgcagtgacaaacctctcctggtgtgcaggcggtcgcgcactcagcaggactggcaaagcagagtatctgcgtgtcagtgtacgctctgttcgtccgtcgtttg-------------gggcagacccctgcaGCTAATGCCCTCAAGTATGAGGAGCAATACCTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980367 598 + 190429646 Gtgttgggattcactgagatggtggcagaagtattaaagggaaatattagggaaagttatagggaatagtcataaaccttttggaaggccgaaatgttacataacttgtaataattgaacaggctgaggcagccgatacttaccttagagcattaggtcatagggtaaatactagggacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagccagatggcccctcttgcggggaggtcaagtagggatattgccctgtaatgttatttaccttagacctcggtacctgagctttagtcattcctagaactactctcttaaccatgttaattatccgcaagtgtgttgacccaaagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctcttggtgtgcagacggtcggaca---agcaggcctggccaagcagagtatctgtgtgtcagtgtacgtttaattcatccatcgtttgggtcagggtctgcgggccgacccccgcaGCGAATGCCCTCAAGTGTGGGGAGCAATACCTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923126 598 + 189454096 Gtgttgggattcactgagatggtggcagaagtattaaagggaaatattagggaaagttatagggaatagtcataaaccttttggaaggccaaaatgttacataacttgtaataattgaacaggctgaggcagccgatacttaccttagagcattaggtcatagggtaaatactagcgacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagccagatggcccctcttgcggggaggtcaactagggatattgccctgtaatgttatttaccttagacctcggtacctgagctttagtcattcctagaactactctcttaaccatgttaattatccgcaagtgtgttgacccaaagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctcttggtgtgcagacggtcggaca---agcaggactggcaaagcagagtatctgtgtgtcagtgtatgtttaattcatccatcgtttgggtcggggtctgcgggccgacccccgcaGCGAATGCCCTCAAGTGTGGGGAGCAATACCTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24310696 598 - 25927173 Gtgttgggattcactgagatggtggcagaagtattaaagggaaatattagggaaagttatagggaatagtcataaaccttttggaaggccgaaatgttacataacttgtaataattgaacaggctgaggcagccgatacttaccttagagcattaggtcatagggtaaatactagcgacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagccagatggcccctcttgccgggaggtcaactagggatattgccctgtaatgttatttaccttagacctcggtacctgagctttagtcattcctagaactactctcttaaccatgttaattatccgcaagtgtgttgacccaaagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctctaggtgtgcagacggtcggaca---agcaggactggcaaagcagagtatctgtgtgtcagtgtacgtttaattcatccatcgtttgggtcggggtctgcgggccgacccccgcaGCGAATGCCCTCAAGTGTGGGGAGCAATACCTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344205 596 + 4669795 Gtgttgggattcactcagatggtggcagaagtattaaagggaaatattagggaaagttatagggaatagtcacaaaccttttggaaggccgaaatgttacataatttgtaataattgaacagactgaggcagccaatacttaccttagagcattaggtcatagggtaaata-tagggacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagcccgacgg-ccctgttgcagggaggttgactagggatattgccctgtaatggtatttatcttagacctgggtacctgagctttagtcattcctagaactactctcttaaccatgttaattatccgcaagtgtgttgactcaaagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctcttggtgtgcagacggtcggaga---agcaggcctggccaagcagagtatctgtgtgtcagtgtacatttaattcatccatcgtttgggtcagggtctgcgggccgacccccgcaGCTAATGCCCTCAAGTGTGAGGAGCAATACCTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134302630 596 + 135778131 Gtgttgggattcactcagatggtggcggaagtattaaagggaaatattagggaaaattatagggaatagtcacaaaccttttggaaggccgaaatgttacataacttgtaataattgaacagactgaggcagccaatacttaccttagagcattaggtcatagggtaaata-tagggacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagcccaatgg-ccctcttgcggggaggtcaactagggatattgccctgtaatggtatttaccttagacctgggtacctgagctttagtcattcctagaactactctcttaaccatgttaattatccgcaagtgtgttgactcaaagcttctgttgttaattgtataccaaataaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctcttggtgtgcagacggtcacaca---agcaggcctggccaagcagagtatctgtgtgtcagtgtacgtttaattcatccatcgtttgggtcagggtctgcgggccgacccccgcaGCTAATGCCCTCAAGTGTGAGGAGCAATACCTCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870177 597 + 2368649 Gtgttgggattcactcagatggtggcagaagtattaaagggaaatattagggaaagttatagggaagagtcacaaacctcttggaaggccgaaatgttacttaacttgtaataattgaacagactgaggcagccgatacttaccatagagcattaggtcatagggtaaatactagggacaatagaggcttccccagttaagtctgtttaccctacatccattaactaacctttgagccagatgg-ccctcttgcggggaggtcgactagggatattgccctgtaatggtatttaccttagaccccggtacctgagctttagtcattcctagaactactttcttaaccatgttaattatccgcaagtgtgttgactaaaagcttctgttgttaattgtataccaaatcaatgcctggagtgtgagctg-ctcagggc----cacagtaacaaacctctcttggtgtgcagacggtcggaca---agcaggactggcaaagcagagtatctgtgtgtcagtgaacgtttaattcatccatcgtttgggtcagggtctgcgggctgacccctgcaGCTAATGCCCTCAAGTGTGAGGAGGAATACCTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189603726 0 - 190850796 C e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382740 0 - 5030052 C e saiBol1.JH378165 13092635 0 - 14256875 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=16676.000000 s hg38.chr4_KI270789v1_alt 97483 3 + 205944 TTA s panTro5.chr4 192889127 3 + 194502333 TTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772950 3 + 195804263 TTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809370 3 + 4876863 TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698903 3 + 115148730 CTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980965 3 + 190429646 TTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923724 3 + 189454096 TTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311294 3 - 25927173 TTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344801 3 + 4669795 TTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303226 3 + 135778131 TTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870774 3 + 2368649 TTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603726 3 - 190850796 TTA i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3382740 0 - 5030052 C e saiBol1.JH378165 13092635 0 - 14256875 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=14196.000000 s hg38.chr4_KI270789v1_alt 97486 2 + 205944 TA s panTro5.chr4 192889130 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772953 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809373 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698906 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980968 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923727 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311297 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344804 2 + 4669795 TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303229 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870777 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603729 2 - 190850796 TA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3382740 2 - 5030052 TA i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e saiBol1.JH378165 13092635 0 - 14256875 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=1232425.000000 s hg38.chr4_KI270789v1_alt 97488 174 + 205944 GACTTAGTTGTGAAAAGTTTTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTTTACAAACCCTCATAACATTgagtgggaaaaaaatttagatct--cagtcaactccttgatcttacacataaagaaactgatgctcaaaatatgaaaagattttcccaa s panTro5.chr4 192889132 174 + 194502333 GACTTAGTTGTGAAAAG--TTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTTTACAAACCCTCATAACACTgagtgggaaaaaaatatagatctcacagtcaactccttgatcttacacataaagaaactgatgctcaaaatgtgaaaagattttcccaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192772955 173 + 195804263 GACTTAGTTGTGAAAAG--TTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTTTACAAaccctcataacactgagtggg-aaaaaatatagatctcacagtcaactccttgatcttacacataaagaaactgatgctcaaaatgtgaaaagattttcccaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809375 176 + 4876863 GACTTAGTTGTGAAAAGTTTTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTTTACAAACCCTCATAACATTgagtgggaaaaaaatttagatctcacagtcaactccttgatcttacacataaagaaactgatgctcaaaatatgaaaagattttcccaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112698908 174 + 115148730 GACTTAGTTGTGAAAGG--TTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACCGAATTTTACAAACCCTCATAACATTgagtgggaaaagaatttagatatcacaatcaactccttgatcttacacataaagaaactgatgatcaaaatgtgaaaagattttcccaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188980970 174 + 190429646 GACCTAGTTGTGAAAAG--GTTTTAAAATTAACGAGACAGTAATCAGGTATTTTAAACAACTGAATTttataaaacctcataacattgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacacataaataaactgatgcttaaaatgtgaaaagattttcccaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923729 174 + 189454096 GACCTAGTTGTGAAAAG--GTTTTAAAATTAACGAGACAGTAATCAGGTATTTTAAACAACTGAATTttataaaacctcataacattgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacacataaataaactgatgcttaaaatgtgaaaagattttcccaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311299 174 - 25927173 GACCTAGTTGTGAAAAG--GTTTTAAAATTAACGAGACAGTAATCAGGTATTTTAAACAACTGAATTttataaaacctcataacattgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacacataaataaactgatgctcaaaatgtgaaaagattttcccaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344806 174 + 4669795 GACCTAGTTGTGAAAAG--GTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTttataaaacctcataacattgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacacataaataaactgatgctcaaaatgtgaaaagattttcccaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303231 169 + 135778131 GACCTAGTTGTGAAAAG--GTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAACAACTGAATTttataaaacctcataacactgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacac----ataaactgatggtc-aaatgtgaaaagattttcccaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870779 174 + 2368649 GACCTAGTTGTGAAAAG--GTTTTAAAATTAATGAGACAGTAATCAGGTATTTTAAAAAACTGAATTttataaaacctcataacattgagtgggaaaaaaatttagatatcactgtcaactccttgctcttacacataaataaactgatgctcaaaatgtgaaaagattttcccaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603731 173 - 190850796 GACTTAGTAGtaaatat--ttttt-aaattaataaGATAGTAATCAGATATTTTAAACAACTGAATTTCACAAACCCTCTTAACACTGAGTGGGAAAAAAATGTAAGTATCACAGTCAACTCCTCAATCTTACACATGAAGAAAGTGATGGTCAAAATGTGAAAAGATTTTCTCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13092635 173 - 14256875 GACTTAGTGGTGAAAAG--TTTTTAAAATTAATAAGATAATAATCAGATA-TTTAAACAACTGAATTTCACAAaccctcataacactgagtgggaaaaaaatttaggtatcacagtcaactcctggatcttacacatgaagaaactgatggtcaaaatgtgaaaagattttcccaa i saiBol1.JH378165 C 0 I 490 s aotNan1.NW_018492112v1 3382742 172 - 5030052 GACTTAATAGTAAAAAG--TTTTT-AAATTAGTAAGATAATAATCGGATATTTTAAACAACTGAATTTCACAAACCCtcataaaactgagtggg-aaaaaatttagatatcacagtcaactccttgatcttacacatgaagaaactgatggtcaaaatgtgaaaaggttttcccaa i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=14092.000000 s hg38.chr4_KI270789v1_alt 97662 2 + 205944 gt s panTro5.chr4 192889306 2 + 194502333 gt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773128 2 + 195804263 gt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809551 2 + 4876863 gt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699082 2 + 115148730 gt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981144 2 + 190429646 gt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923903 2 + 189454096 gt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311473 2 - 25927173 gt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344980 2 + 4669795 gt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303400 2 + 135778131 gt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870953 2 + 2368649 gt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603904 2 - 190850796 AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093298 2 - 14256875 gc i saiBol1.JH378165 I 490 C 0 s aotNan1.NW_018492112v1 3382914 2 - 5030052 gt i aotNan1.NW_018492112v1 C 0 I 492 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=30120.000000 s hg38.chr4_KI270789v1_alt 97664 5 + 205944 taata s panTro5.chr4 192889308 5 + 194502333 taata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773130 5 + 195804263 taata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809553 5 + 4876863 taata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699084 5 + 115148730 tagta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981146 5 + 190429646 taata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923905 5 + 189454096 taata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311475 5 - 25927173 taata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344982 5 + 4669795 taata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303402 5 + 135778131 taata i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870955 5 + 2368649 tagta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603906 5 - 190850796 TTATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093300 5 - 14256875 taaca i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3383408 5 - 5030052 TAACA i aotNan1.NW_018492112v1 I 492 C 0 e cebCap1.NW_016107886v1 988263 680 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 97669 1 + 205944 t s panTro5.chr4 192889313 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773135 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809558 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699089 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981151 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923910 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311480 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344987 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303407 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870960 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189603911 1 - 190850796 T i calJac3.chr3 C 0 I 533 s saiBol1.JH378165 13093305 1 - 14256875 t i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988943 1 - 2196201 T i cebCap1.NW_016107886v1 I 680 C 0 s aotNan1.NW_018492112v1 3383413 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=511614.000000 s hg38.chr4_KI270789v1_alt 97670 56 + 205944 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt s panTro5.chr4 192889314 56 + 194502333 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773136 56 + 195804263 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809559 56 + 4876863 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699090 56 + 115148730 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981152 56 + 190429646 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923911 56 + 189454096 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311481 56 - 25927173 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3344988 56 + 4669795 tacacatgatgagtggatatgatactagagccagtgtttgatctccaattccagtt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303408 56 + 135778131 tacacatgatcagtggatatgatactagagccagtgtttgatctccaattccagtt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 870961 56 + 2368649 tacacatgatcagtggatatgatactagagccagtctttgatctccaattccagtt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189604445 56 - 190850796 TACACATGATCGGTGGATGTAATACTAGAGCCAGTCTTTGATCTCCAATTCCAATT i calJac3.chr3 I 533 C 0 s saiBol1.JH378165 13093306 56 - 14256875 tacacgtaatcagtggatacgatactagagccagtctttgatctccagttccaatt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 988944 56 - 2196201 TACACATAATCAGTGGGTACGATAGTAGAGCCAGTCTTTGATCTCCAATTCCAATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3383414 56 - 5030052 TACACATAATCAGTGGATATGATACCACAGCCAGTCTTTGATGTCCAATTCCAATT i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16943467 598 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=1251307.000000 s hg38.chr4_KI270789v1_alt 97726 164 + 205944 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCGGATAAAGT-------------------------------AAAAAACCTA---CAGTTTCTATGAGGATCCACA----------------------------TACTTTCCTG-ACAATGGAGTAAGAGAAAATGTGGCAAGTGACCATTGGGCCCTCCAGGTGTCTTAGAGTGGTTGACATAGTT s panTro5.chr4 192889370 164 + 194502333 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCGGATAAAGT-------------------------------AAAAAAACTA---CGGTTTCTATGAGCATCCACA----------------------------TATTTTCCTG-ACAACGGAGTAAGAGAAAATGTGGCAAGTGGCCATTGGGCCCTCCAGGTGTCTTAGAGTGGTTGACATAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773192 164 + 195804263 ttcttactaTA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCGGATAAAGT-------------------------------AAAAAAACTA---CGGTTTCTATGAGCATCCACA----------------------------TATTTTCCTG-ACAACGGAGTAAGAGAAAATGTGGCAAGTGGCCATTGGGCCCTCCAGGTGTCTTAGAGTGGTTGACATAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809615 163 + 4876863 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCGGATAAAGT-------------------------------AAAAAAGCTA---CAGTTTCTATGAGGATCCACA----------------------------CACTTTCGTG-ACAACGGAGTAAGAGAAAACGTGGCAAGTGGCCATCGGG-CCTCCAGGTGTCTTAGAGTGGTTGACATAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699146 164 + 115148730 ttctTACTATA--ATAAGG-TGGA-----TTACTTGTGAGGGAACCAACCAGATAAAGT-------------------------------AAAAAAACTA---CAGTTTCTATGAGGGTCCACA----------------------------TACTTTCTTG-ACAGCGGAGTAAGAGAAAATGTGGCAAGTGGCCATTGGGCCCTCCAGGTGTCTTAGAGTGGTTGACATAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981208 193 + 190429646 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCAGATAAAGT-----------------------------AAAAAAAAACTA---CAGTTTCCATGAGGATCCACAAAAACTACAGTTACTATGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCAAGTGGCCAGTGGG-CCTCCAGGGGTCTTAGAGTGGTTGACATAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187923967 193 + 189454096 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCAGATAAAGT-----------------------------AAAAAAAAACTA---CAGTTTCCATGAGGATCCACAAAAACTACAGTTACTATGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCAAGTGGCCAGTGGG-CCTCCAGGGGTCTTAGGGTGGTTGACATAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311537 193 - 25927173 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCAGATAAAGT-----------------------------AAAAAAAAACTA---CAGTTTCCATGAGGATCCACAAAAACTAGAGTTACTATGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCAAGTGGCCAGTGGG-CCTCCAGGGGTCTTAGAGTGGTTGACATAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345044 195 + 4669795 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAGCCAGATAAAGTA-----------------------A----AAAAAAAAACTG---CAGTTTCCATGAGGATCCACAAAAACTACAGTTACTATGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCAAGTGGCCAGTGGG-CCTCCAGGGGTCTTAGAGTGGTTGACATAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303464 192 + 135778131 ttctTACTATA--ATAAGA-AA------------TGTGAGGGAACCAACCAGATAAAGTAA--------------------AGA----AAAAAAAAACTA---CAGTTTCCATAAGGATCCACAAAAACTACAGTTACTATGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCAAGTGGCCAGTGGGCCCTCCAGGGGTCTTAGAGTGGCTGACATAGTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871017 185 + 2368649 ttctTACTATA--ATAAGG-TGGA-----TTTCTTGTGAGGGAACCAACCAGCTAAAGT-----------------------------AAAAAAAACCTA---CAGTTTCCATGAGGATCCACAAAAACT--AGTTACTCTGAGGATCCACCTACTTTCTTG-ACAACAGAGTAAGAGAAAATGTGGCCAGTGGGC-------CCTCCAGGGCTCTTAGAGTGGTAGACATAGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189604501 177 - 190850796 TTCTTACTATA--ATAAGG-TGAA-----TTTCTTGTGAGGGAACCGACCAGATaaaccaa--------------aacaaaaca----aaacaaaaACGA---CAGTTTTTGTGAGGATTCACA----------------------------TACTTTCTGG-AAAACGGAGTAAGAGAAAATGTGGCCAGTGGCCACTGGGCCCGCCAGGTGTCTTAGAGTGGCTGACATAGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093362 174 - 14256875 ttcttactaTA--ATAAGG-TGAA-----TTTCTTGTGAGGGAACCAACCAGATAAACTAA-----------------AAAACA----AAAACAAAACTA---TGGCTTCTGTGAGGATTCACA----------------------------CAGCTTCTTG-ACAACGGAGTAGGAGAAAATGTGGCCAGGGGCCACGGGGCCCGCCAGGTGTGTTACAGTGGCTGACGTAGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989000 174 - 2196201 TTCTTACTATA--ATAAGG-TCAA-----TTTCTTGTGAGGGAACCaaccaaataaactaa-----------------aaaaac----aaaacaaaacTA---CAGCTTCTGTGAGGATTCACA----------------------------TACCTCCTTG-ACAACAGAGTAGGAGAAAATGTGGCCAGGGGCCACTGGGCCGGCCAGGTGTCTTCGAGTGGCTGACGTAGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3383470 196 - 5030052 TTCTTACTATA--ATAAGGTTGAA-----TTTCTTGTGAGGGAGCCAACCAGATaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacTA---CAGTTTCTGTGAGGATTCACA----------------------------TAGTTTCTTG-ACAATGGAGTAAGAGAAAATGTGGCCAGTGGCCACTGGGCCTGCCTGGTGTCTTAGAGGGGCTGACGTAGCT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16944065 173 - 59632846 ttcaggctatagcaTAAGG-AGAATTTTTTTTTTTTTAATGAAACCAACTAGGAAAAGT-----------------------------AAAACAAAACAAAATTAGTTTCCATGCCGACCGACA----------------------------CACTACTTTGAACAATGGGGTAAGGGAAAATATGACAAG---ACAGTGAA-GCTCCAGCTGCCTTAGAGTGGTTGACACAGTT i canFam3.chr16 I 598 I 10 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=181401.000000 s hg38.chr4_KI270789v1_alt 97890 21 + 205944 CCTGAACAAGAGTGGAAATCC s panTro5.chr4 192889534 21 + 194502333 CCTGAACAAGAGTGGAAATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773356 21 + 195804263 CCTGAACAAGAGTGGAAATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809778 21 + 4876863 CCTGAACAAGAGTGGAAATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699310 21 + 115148730 CCTGAACAAGAGTGGAAATCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981401 21 + 190429646 CCTGAACAAGGGTGGAAATCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924160 21 + 189454096 CCTGAACAAGGGTGGAAATCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311730 21 - 25927173 CCTGAACAAGGGTGGAAATCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345239 21 + 4669795 CCTGAACAAGGGTGGAAATCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303656 21 + 135778131 CCTGAACAAGGGTGGAAATCC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871202 21 + 2368649 CCTGAACAAGGGTGGAAATCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189604678 21 - 190850796 CCTGAACAAGGGTGGAAATCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093536 20 - 14256875 CC-GGACAAGCATGGAAATCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989174 21 - 2196201 CCCGAACAAGCATGGAAACCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3383666 21 - 5030052 CCTGAACAAGCATGGAAATCC i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16944238 10 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=12606.000000 s hg38.chr4_KI270789v1_alt 97911 2 + 205944 Ag s panTro5.chr4 192889555 2 + 194502333 Ag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773377 2 + 195804263 Ag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809799 2 + 4876863 Ag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699331 2 + 115148730 Ag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981422 2 + 190429646 Ag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924181 2 + 189454096 Ag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311751 2 - 25927173 Ag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345260 2 + 4669795 Ag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303677 2 + 135778131 Ag i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871223 2 + 2368649 AG i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3383687 2 - 5030052 AG i aotNan1.NW_018492112v1 C 0 I 2 e calJac3.chr3 189604699 0 - 190850796 C e cebCap1.NW_016107886v1 989195 0 - 2196201 C e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16944238 10 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e saiBol1.JH378165 13093556 0 - 14256875 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=766161.000000 s hg38.chr4_KI270789v1_alt 97913 195 + 205944 cctggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaacaccatctctact-gaaaatacaaaaaattagccgggcctggtggcgggcacctgtaatcccagtt-acactcgggaggctgaggcaggagaat s panTro5.chr4 192889557 195 + 194502333 cctggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggcggccggatcataaggtcaggagattgagaccatcctggctaacacggtgaaacaccatctctact-gaaaacacaaaaaattagccgggagtggtggtgggcacctgtaatcccagtt-acactcgggaggctgaggcaggagaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773379 194 + 195804263 cctggcgtggtggctcacacctgtaatcccagcactttgggaggctgaggcggccggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaacaccatctctact-gaaaacac-aaaaattagccgggagtggtggtgggcacctgtaatcccagtt-acactcgggaggctgaggcaggagaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809801 196 + 4876863 ccgggtgtggtggcttacgcctgtaatcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaacaccatctctact-gaaaatacaaaaaattagccgggcgtggttgtgggcacctgtaatcccagttaacactcgggaggctgaggcaggagaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699333 195 + 115148730 ccgggcgcggtggctcacgcctggaatcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaacactatctctact-agaaatacaaaaagttagccgggcgtgggggtgggcgcctgtaatcccagtt-acactcgggaggctgaggcaggagaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981424 191 + 190429646 ccgggtgcagtggcttccgcctgtaatcccagcactttaggaggccaaggcgggcggatcacgaggtcaggagattgagaccagcctggctaacacggtgaaaccccgtctctact-aaaaatac-aaaaactagccgggcgaggtggc-ggcgcctgtggtcccagct---cctcgggaggctgaggcaggagaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924183 191 + 189454096 ccgggtgcagtggcttccgcctgtaatcccagcactttaggaggccaaggcgggcggatcacgaggtcaggagattgagaccagcctggctaacacggtgaaaccccgtctctact-aaaaatac-aaaaactagccgggcgaggtggc-ggcgcctgtggtcccagct---actcgggaggctgaggcaggagaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311753 192 - 25927173 ccgggcgcagtggcttccgcctgtaatcccagcactttaggaggccaaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggcgaaaccccgtctctact-aaaaatacaaaaaactagccgggcgaggtggc-ggcgcctgtagtcccagct---actcgggaggctgaggcaggagaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345262 192 + 4669795 ccgggtgcagtggctcctgcctgtaatcccagcactttgggaggccaagtcgggcagatcacgaggtcaggagatccagaccatcctggctaacacggtgaaaccccgtctctact-aaaaatacaaaaaactagccgggcgaggtggc-ggcgcctgtagtcccagct---actcgggaggctgaggcaggagaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303679 148 + 135778131 ccgggtgcagtggctcctgcctgtaatcccagcacttt-ggaggccaaggcgggcagatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctttactaaaaaatacaaaaaactagccg------------------------------------------------gccaggagaat i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871225 193 + 2368649 -caggcgcggtggctcccgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacactctaaaaccctatctccactaaaaaatacaaaaaactagccgggcgaggtggcgggcgcctgtagtcccagct---actcgggaggctgaggcaggagaat i colAng1.NW_012116221v1 C 0 M 220 e calJac3.chr3 189604699 0 - 190850796 C e cebCap1.NW_016107886v1 989195 0 - 2196201 C e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16944238 10 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3383689 2 - 5030052 I e saiBol1.JH378165 13093556 0 - 14256875 C e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=305883.000000 s hg38.chr4_KI270789v1_alt 98108 95 + 205944 tgcttgaacccgggaggcagagcttgc----aatgagccgagatagtgcc-actgcactccagcc-tgggcgacagagtgactctgtctc----------------aaaaaaaaaaG s panTro5.chr4 192889752 98 + 194502333 tgcttgaacccgggaggcagagcttgc----aatgagccgagatagtgcc-actgcactccagcc-tgggcgacagagtgactctgtctc-------------aaaaaaaaaaaaaG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773573 97 + 195804263 tgcttgaacccgggaggcagagcttgc----aatgagccgagatagtgcc-actgcactccagcc-tgggcgacagagtgactctgtctc--------------aaaaaaaaaaaaG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3809997 103 + 4876863 tgcttgaacccgggaggcagagcttgc----aacaagccgagatagtgcc-actgcactccagcc-tgggcgacagagtgactctgtctcaaaa--------aaaaaaaaaaaaaaG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699528 98 + 115148730 tgcttgaacccaggagg-ggagcttgc----aatgagcagagatggtgcc-actgcactccaacc-tgggcgacagagtgactctgtctc------------aaaaaaaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981615 107 + 190429646 ggcgggaacccggggggcggagcttgcagtgagtgagcagagatcgcgccggct-cactccagcc-tgggccacagagtgactctgtctcaaaa--------aaaaaaaaaaaaaaG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924374 110 + 189454096 ggcgggaacccggggggcggagcttgc----agtgagccgagatcgcgcc-act-cactccagcc-tgggcggcagagtgactctgtctcaaaagaaaaaaaaaaaaaaaaaaaaaG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24311945 109 - 25927173 ggcgggaacccgggaggcggagcttgc----agtgagctgagatcgcgcc-gct-cactccagcc-tgggccacagagtgactctgtctcaaaa-aaaaaaaaaaaaaaaaaaaaaG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345454 107 + 4669795 ggcgtgaacccgggaggtggagcttgc----agtgagctgagatcgcgcc-gct-cactccagccttgggccacagagtgactctgtctcaaaa----aaaaaaaaaaaaaaaaaaG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303827 100 + 135778131 ggcgtgaacccaggaggtggagcttgc----agtgagtagagatcgcgcc-gct-cactccagcc-tgggccacagagtgactctgtctcaaaa----------aaaaaaaaaaaaG i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189604699 0 - 190850796 C e cebCap1.NW_016107886v1 989195 0 - 2196201 C e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e canFam3.chr16 16944238 10 - 59632846 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3383689 2 - 5030052 I e saiBol1.JH378165 13093556 0 - 14256875 C e colAng1.NW_012116221v1 871418 220 + 2368649 M e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=52255.000000 s hg38.chr4_KI270789v1_alt 98203 11 + 205944 AGTGGAAATCT s panTro5.chr4 192889850 11 + 194502333 AGTGGAAATCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773670 11 + 195804263 AGTGGAAATCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810100 11 + 4876863 AGTGGAAATCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699626 11 + 115148730 aGTGGAAATCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981722 11 + 190429646 AGTGGAAATCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924484 11 + 189454096 AGTGGAAATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312054 11 - 25927173 AGTGGAAATCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345561 11 + 4669795 AGTGGAAATCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303927 11 + 135778131 AGTGGAAATCT i chlSab2.chr7 C 0 C 0 s canFam3.chr16 16944248 11 - 59632846 AGTAGAAATGC i canFam3.chr16 I 10 C 0 e calJac3.chr3 189604699 0 - 190850796 C e cebCap1.NW_016107886v1 989195 0 - 2196201 C e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3383689 2 - 5030052 I e saiBol1.JH378165 13093556 0 - 14256875 C e colAng1.NW_012116221v1 871418 220 + 2368649 M e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=29060.000000 s hg38.chr4_KI270789v1_alt 98214 4 + 205944 AGGT s panTro5.chr4 192889861 4 + 194502333 AGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773681 4 + 195804263 AGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810111 4 + 4876863 AGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699637 4 + 115148730 AGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981733 4 + 190429646 AGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924495 4 + 189454096 AGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312065 4 - 25927173 AGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345572 4 + 4669795 AGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303938 4 + 135778131 AGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189604699 4 - 190850796 AGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093556 4 - 14256875 AGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989195 4 - 2196201 AGGC i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16944259 4 - 59632846 AGGT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3383689 2 - 5030052 I e colAng1.NW_012116221v1 871418 220 + 2368649 M e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=236899.000000 s hg38.chr4_KI270789v1_alt 98218 29 + 205944 ---------GGATTCAGGGATAGGGAATGGTAGCAAAA s panTro5.chr4 192889865 29 + 194502333 ---------GGATTCAGGGATAGAGAATGGTAGCAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773685 29 + 195804263 ---------GGATTCAGGGATAGAGAATGGTAGCAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810115 29 + 4876863 ---------GGATTCAGGGATAGAGAATGGTAGCAAAa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699641 29 + 115148730 ---------GGATTCAGGGTTAGAGAATGGTAGCAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981737 29 + 190429646 ---------GGATTCAGGGATAGAGCATGGTAACAaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924499 29 + 189454096 ---------GGATTCAGGGATAGAGCATGGTAACAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312069 29 - 25927173 ---------GGATTCAGGGATAGAGCATGGTAACAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345576 29 + 4669795 ---------GGATTCAGGGATAGAGCATGGTAACAaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303942 29 + 135778131 ---------GGATTCAGGGATAGAGCGTGGTAACAAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189604703 29 - 190850796 ---------AGATTCAGGGATAGAGAATGGTAGCAGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093560 29 - 14256875 ---------GGATTCAGGGACAGAGAATGGTAGCAGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989199 29 - 2196201 ---------GGACTCAGGGACAGAGAATGGTagcagag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3383691 29 - 5030052 ---------GGATTCagggatagagaatggtagcagag i aotNan1.NW_018492112v1 I 2 C 0 s canFam3.chr16 16944263 38 - 59632846 GGCATGTGAGAATTCAGGGATGGAGAATGGTGACAGAG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e colAng1.NW_012116221v1 871418 220 + 2368649 M e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=1056478.000000 s hg38.chr4_KI270789v1_alt 98247 160 + 205944 agaga-gagagag--gagaga--gagggaagagtaaggagcac----------------agaaatag---------------aaag-agCATCTGGT-AGTGAGATGAGCTGGAATC--TGGGGAGAGGGACCTGTGTCCAGGCAGGCTTCTTACAGAGCTGTCTACTTACAGAGCTCCACACCCACAGCGCCAGGTCAG s panTro5.chr4 192889894 160 + 194502333 agaga-gagagag--gagaga--gagggaagagtaaggagcac----------------agaaatag---------------agaa-agCATCTGGT-AGTGAGATGAGTTGGAATC--TGGGGAGAGGGACCTGTGTCCAGGCAGGCTTCTTACAGAGCTGTCTACTTACAGAGCTCCACACCCACAGGGCCAGGTCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773714 160 + 195804263 agaga-gagagag--gagaga--gagggaagagtaaggagcac----------------agaaatag---------------agaa-agCATCTGGT-AGTGAGATGAGTTGGAATC--TGGGGAGAGGGACCTGTGTCCAGGCAGGCTTCTTACAGAGATGTCTACTTACAGAGCTCCACACCCACAGGGCCAGGTCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810144 162 + 4876863 ggaga-gagagaggagagaga--gagggaagagtaaggagcac----------------agaaatag---------------aAAA-AGCATCTGGT-AGTGAGATGAGTTGGAATC--TGAGGAGAGGGACCTGTGTCCAGGCAGGCTTCTTACAGAGCTGTCTACTTACAGAGCTCCACACCCACAGCGCCAGgtcag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699670 160 + 115148730 agaga-gcgagag--gagaga--gagagaagagtaaggagcac----------------agaaatag---------------aaag-agCATCTGGT-AGTGAGATGAGTTGGAATC--TGGGGAGAGGGCCCTGTGTCCAGGCAGGCTTCTTACTGAGCTGTCTACTTACAGAGCTCCGCACCCACAGCACCAGgtcag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981766 153 + 190429646 ----a-gagagag--aaaaga--gagagaaaagTAAGGAGCAC----------------AGAAATAG---------------AAAAAAGCATCTAGC-AGTGACATGAGTTGGAATC--TGGGCACAGGGGCCCGTGTC----CAGGCTTCTTACCGAGCTGTCTGCTTGCAGAGCTCTGCACCCACAGCGGCAGGGCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924528 153 + 189454096 ----A-GAGAGAG--GAAAGA--GAGAGAAAAGTAAGGAGCAC----------------ATAAATAG---------------AAAAAAGCATCTAGC-AGTGACATGAGTTGGAATC--TGGGCACAGGGGCCCGTGTC----CAGGCTTCTTACCGAGCTGTCTGCTTGCAGAGCTCTGCACCCACAGCGGCAGGGCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312098 153 - 25927173 ----A-GAGAGAG--AAAACA--GAGAGAAAAGTAAGGAGCAC----------------AGAAATAG---------------AAAAAAGCATCTAGC-AGTGACATGAGTTGGAATC--TGGGCACAGGGGCCCGTGTC----CAGGCTTCTTACCGAGCTGTCTGCTTGCAGAGCTCTGCACCCACAGCGGCAGGGCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345605 153 + 4669795 ----a-gagagag--aaaaga--gagagaaaagTAAGGAGCAC----------------AGAAATAG---------------AAAAAAGCATCTAGC-AGTGACATGAGTTGGAATC--TGGGCACAGGGGCCCGTGTC----CAGGCTTCTTCCCGAGCTGTCTGCTTGCAGAGCTCTGCACCCACAGCGGCAGGGCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134303971 153 + 135778131 ----A-GAGAGAG--GAAAGA--GAGAGAAAAGTAAGGAGCAC----------------AGAAATAG---------------AAAAAAGCATCTAGC-AGTGACATGAGTTGGAATC--TGGGCACAGGGGCCCGTGTC----CAGGCTTCTTACCGAGCTGTCTGCTTGCAGAGCTCTGCACCCACAGCGGCAGGGCAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871646 159 + 2368649 agaaa-gagagag--gacaga--gaaagaaaagtaaggagcac----------------agaaatag---------------aaaagaGCATCTAGC-AGTGCCATGAGTTGGAATC--GGGG-ACAGGGA-CCGTGTCCGGGCAGGCTTCTTCCCGCGCTGTCTGCTTACCGAGCTCTGCACCCCCCGCGGCCGGGCCG i colAng1.NW_012116221v1 M 220 C 0 s calJac3.chr3 189604732 164 - 190850796 AGAGA-GAGAGGA--GCAGGAGAGAGAGAAGAGTAGGGACCAC----------------AGAAATGG---------------GAAG-AGCATCTGGT-AGTGATAGGAGCTGTAATCCTTGGGGAGGGGGACCCGTGCCCAGCCAGGCTTCTTACAGAGCTTTCCACCTTCAGAGCCCCACACACACAGCGCCGGgccgg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13093589 162 - 14256875 AGAGAGGAGAGAA--GGAGGAG-GAGAGAGGAGTAGGGACCGC----------------AGAAGCAG---------------GAAA-GGCATCTTGC-AGTGTCATGAGCCGTCGCCTGTGGGGA-GGGGACCCGCGCCCAGCCAGGCTTCCTGCAGAGCTTTCTACCTTCAGAGCTCTGCAGGTGCAGCGCC-GGCCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989228 163 - 2196201 agagaggacagga--ggagga--gggagaagagCACGGACCAC----------------AGAAACAG---------------GAAA-AGCATCTGGT-GGTGAGATGAGCTGTAATCTGTGGGGAGGGGGACCCGTGCCCAGCCAGGCCTCTTACAGAGCTTCCTACCTTCAGAGCTCTGCACATACAGCGCCGGGCCAG i cebCap1.NW_016107886v1 C 0 I 13 s aotNan1.NW_018492112v1 3383720 159 - 5030052 agaga-gagagaa--gga-----gagagaagagTACGGACCAC----------------AGAAATAG---------------GAAA-AGCATCTGGT-GGTGATATGAGCTGTAATCTTTGGGGAGGAGGACCCGTGCCCAGCCAGGCTTCTTACAGAGCTTTCTACCATCAGAGCTCTGCACATACAGCGCCAGGCCAG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16944301 189 - 59632846 --AAA-GGGTGAG--G-GAGA--GAGAGACAAGTAAAGACCACAAGAACCAGGAAAGTTAGAAATAGTGACCACACAGATCAGAAA-AGCTTCTAGCAAGTGATAGGAGTATGAGTAT-TTGGGAAAGAGGTAGATGCC-ATCCAGGCTTCTTCTAGAGCTATCTACATATAAGACTTTCTATACAAGGCACTGGAATGG i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=93283.000000 s hg38.chr4_KI270789v1_alt 98407 21 + 205944 TGATTTGTCTGTCGGTGCGCA s panTro5.chr4 192890054 21 + 194502333 TGATTTGTCTGTCGGTGCGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773874 21 + 195804263 TGATTTGTCTGTCGGTGCGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810306 21 + 4876863 tgatttgtctgtctgtgcgca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699830 21 + 115148730 tgatttgtctgtctgtgcgca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981919 19 + 190429646 TGACTGGTCTGTCGGCGca-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924681 19 + 189454096 TGACTGGTCTGTCGGCGca-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312251 19 - 25927173 TGACTGGTCTGTCGGCGca-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345758 19 + 4669795 TGACTGGTCTGTCGGCGca-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304124 21 + 135778131 TGACTGGTCTGTCGGCGCACC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871805 21 + 2368649 TGACGGGTCTGTCGGCGCGca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189604896 20 - 190850796 -gatgtgtctgtggctgcgca i calJac3.chr3 C 0 I 7 s saiBol1.JH378165 13093751 20 - 14256875 -GCCGTGTCTGTCGGTGTGCC i saiBol1.JH378165 C 0 I 7 s aotNan1.NW_018492112v1 3383879 20 - 5030052 -AGTGtgtctgttggtgtgca i aotNan1.NW_018492112v1 C 0 I 7 s canFam3.chr16 16944490 21 - 59632846 CTATttgtctggtgttttgcc i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 989391 13 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=2086124.000000 s hg38.chr4_KI270789v1_alt 98428 257 + 205944 ------CC-cccattctgtgctcttttctgtatcacaggggactggatatctgcaagctacattttccacactgcc-ttctgactggtatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagagcaaatccatatttttAGTCA------TTGTTTTTCCTGGTGGTGCCCTTGGCAGCAGTAACCACAGTGACAAGTGGATGCAAGCCCGGGTTCCCTCTAAGGTGGCACAGTTCCAATG------------gcagca s panTro5.chr4 192890075 257 + 194502333 ------CC-cccattctgtactctgttctgtatcacaggggactggatatctgcaagctacattttccacactccc-ttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccatatttttAGTCA------TTGTTTTTCCTGGTGGTGCCCTTGGCAGCAGTAACCACAGTGACAAGTGGATGCAAGCCCGGGTTCCCTCTAAGGTGGCACAGATCCAATG------------GCAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192773895 257 + 195804263 ------CC-ccccttctgtactctgttctgtatcacaggggactggatatctgcaagctacattttccacactccc-ttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccatatttttAGTCA------TTGTTTTTCCTGGTGGTGCCCTTGGCAGCAGTAACCACAGTGACAAGTGGATGCAAGCCCGGGTTCCCTCTAAGGTGGCACAGATCTAATG------------GCAGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810327 257 + 4876863 ------cc-ccccttctgtgctcttttctgtatcacaggggactggatatctgcaagctacattttccacactccc-ttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccatatttttAGTCA------TTGTTTTTCCTGGTGGTGCCCTTGGCAGCAGTAACCACAGTGACAAGTGGATGCAAGCCCGGGTTCCCTCTAAGGTGGCACAGTTCCAATG------------GCAGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112699851 258 + 115148730 ------ccaccctttctgtgctcttttctgtatcacaggggactggatatctgcaagctacattttccacactccc-ttctgactgatatttaataagattttgataatgggaggcactgacaagaaatgagaaggtgagagaaagggcaaatccatatttttAGTCA------TTGTTTTTCCTGGTAGTGCCCTTGGCAGCAGTAACCACAGTGACAAGTGGATGCAAGCCCGGGTTCCCTCTAAGGCGGCACAGTTCCAATG------------GCAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188981938 254 + 190429646 ------cc-ctccttctgtgctc-tttctttatcacgggggactggatatccgcaagctaccttttccagactccc-ttctgactgatatttaataagattttgatcatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccgtattgttagtca--ttttttttttttcctggtagtgcctttggcagcagTAACCACAGTGATAAGTGGAGGCAAGCCCGGGTTCCCTCTAAGGCGGCACAGTTCCAAGG------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924700 254 + 189454096 ------cc-ctccttctgtgctc-tttctttatcacgggggactggatatccgcaagctaccttttccagactccc-ttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccgtattgttagtca--ttttttttttttcctggtagtgcctttggcagcagTAACCACAGTGATAAGTGGAGGCAAGCCCGGGTTCCCTTTAAGGCGGCACAGTTCCAAGG------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312270 257 - 25927173 ------cc-ctccttctgtgctc-tttctttatcacgggggactggatatccgcaagctaccttttccagactccctttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccgtattgttagtcattttttttttttttcctggtagtgcctttggcagcagTAACCACAGTGATAAGTGGAGGCAAGCCCGGGTTCCCTCTAAGGCGGCACAGTTCCAAGG------------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3345777 250 + 4669795 ------cc-ctccttctgtgctc-tttctttatcg-gggggactggatatccgcaagctaccttttccagactccc-ttctgactgatatttagtaagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccgtatttttagtca-----tttttttttcctggtagtgcctttggcagcagTAACCACAGTGATAAGTGGAGGCAAGCCCGGGTTCCCTCTAAGGCGGCACAGTTCCAAGG------------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304145 259 + 135778131 ------cc-ctccttctgtgctcttttctttatcacgggggactggatatccgcaagctacattttccagactccc-ttctgactgatatttaataagattttgataatgggaggcactggcaagaaatgggaaggtgggagaaagggcaaatccgtatttttagtca----ttttttttttcctggtagtgcctttggcagcagTAACCACAGTGATAAGTGGTTGCAAGCCCGGGTTCCCTCTAAGGCGGCACAGTTCCAAGGGCAGCG------------ i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 871826 257 + 2368649 ------cc-ctccttctgtgctcttttctttatcac-ggggactggatatccgcaagctccgtttcccagactccc-ttctgactgatatttagtaagattttgatcatgggaggcactggctagaaatgggaaggtgggagaaagggcaaatccgtatttttagtca-----ttcttttttcctggtagtgcttttggcagcagTAACCACAGTGATAAGTGGATGCAAGCCCGGGTTCCCTCCAAGGCGGCACAGTTCCCAGG------gcagca------ i colAng1.NW_012116221v1 C 0 I 9 s calJac3.chr3 189604923 254 - 190850796 ------ct-tctgttctgcgttcttttctgtaacacagggg-ctggatatctgcaagctacatttcccagactccc-ttctggctgatttttaataagattttgataatgggaggcactggcaagaaatagaaaggtgggaggaagggcaaatccatatttttagtca-----ttttttttttctggtagtctctttggcagcagcggcCACAGTGACAGGTAGGTGCAAGCCCAGGTCCTCTCTTACGTGGCTCAGTTCCAATG------------GCG--- i calJac3.chr3 I 7 C 0 s saiBol1.JH378165 13093778 253 - 14256875 ------ct-cgtgttctgccttcttttctgaatcacaggga-ctggatatctgcaaactacatttcccagactccc-ttctggctgatttttaataagattttgatcatgggaggcactggcaagaaatagaaaggtgggagaaagggcaaatccatgtatttagtcg------tttgtttttctggtagtgcctttggcagcggTGACCACAGTGACAGGCAGATGCAAGCCCGGGTCCCCTCTCAGGTGGCTCAGTTCCAGTG------------GCG--- i saiBol1.JH378165 I 7 C 0 s cebCap1.NW_016107886v1 989404 254 - 2196201 ------CT-tctgttctacgttcttttctgtatcacagggg-ctggatatctgcaaactacgtttcccagactccc-ttctggctgatttttaataagattttgataatgggaggcactggcaagaaatagaaaggtgggagaaagggcaaatccatatattTAGTCA-----GTTTTTTTTTCTGGTAGTGCTTTTGGCAGCGGTGACCACAGTGACAGGCAGATGCAAGCCCAGGTCCCCTCTTAGGCGGCTCAGTTCCAATG------------GTG--- i cebCap1.NW_016107886v1 I 13 C 0 s aotNan1.NW_018492112v1 3383906 252 - 5030052 ------ct-tctgttctgtgttcttttctgta-cacagggg-ctggatatctgcaaactacatttcctagactccc-ttctggctgattttaaataagattttgataatgggaggcactggcaagaaatagaaaggtgggagaaagggcaaatccatatatttagtca------tttttttttctggtagtgcctttggcagcggTCACCACAGTGACAGGCAGATGCAAGCCCAGGTCCCCTCTTAGGCGGCTCAGTTCCAATG------------GTG--- i aotNan1.NW_018492112v1 I 7 C 0 s canFam3.chr16 16944511 230 - 59632846 ccagtcct-ctccttttgtgatcctttctatatcatggggc-caagctatctgcaaattacattttccagactccc-ttgggatagatttccagtaagttgctgataatgggagacactggcaagagattggaagatgcgaggaagggcagatacttattttcagcta----gtgttttactcctggcagtgcatTTGGTA-----------AATGACAAAGGAGTCCCAGCCTGGGTTCCT------GCATCA----------------------------- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e manLeu1.NW_012102221v1 2752977 4170 - 2847728 M e otoGar3.GL873580 11225681 13 - 11315646 I a score=773823.000000 s hg38.chr4_KI270789v1_alt 98685 78 + 205944 gcagcagcagctgcTCTGACAGCTTTGTAACCACCAGTACTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGTGTGAGC s panTro5.chr4 192890332 78 + 194502333 GCAGCAGCGGCTGCTCTGACAGCTTTGTAAGCACCAGTACTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGTGTGAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774152 78 + 195804263 GCAGCAGCGGCTGCTCTGACAGCTTTGTAAGCACCAGTACTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGTGTGAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810584 78 + 4876863 GCAGCAGCTGCTGCTCTGACAGCTTTGTAAGCACCAGTACTCCTGGGCCCTGGCTCTTGCTGTGTC---AGGAGTGTGAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700109 76 + 115148730 GCAGCAGCGGCTGCTCT-ACAGCTTCAT-AGCACCAGTACTCCTGGGCCCTGGCCCTTGCTGTATC---AGGAGCGTGAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982192 78 + 190429646 GCAGCAGCGGCCGCTCTGACAGCTTCGTAAGCCCCAGCGCTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGCGCGAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187924954 78 + 189454096 GCAGCAGCGGCCGCTCTGACAGCTTCGTAAGCCCCAGCGCTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGCGCGAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312527 78 - 25927173 GCAGCAGCGGCCGCTCTGACAGCTTCGTAAGCCCCAGCGCTCCTGGGCCCTGGCTCTTGCTGTATC---AGGAGCGCGAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346027 78 + 4669795 GCAGCAGCGGCCGCTCTGACAGCTTCATAAGCACCAGCACTCCTGGGCCCTGGCTCTTGCTGTATC---GGGAGCGCGAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304404 78 + 135778131 GCAGCAGCGGCTGCTCTCACAGCTTCATAAGCACCGGCACTGCTGGGCCCTGGCTCTTGCTGTATC---AGGAGCGCGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757194 78 - 2847728 GCAGCAGCGGCCGCTCTGACAGCTTCGTAAGCCCCAGCGCTCCTGGGCCCTGGCTCTTGCTGTATC---GGGAGCGCGAGC i manLeu1.NW_012102221v1 M 4170 C 0 s colAng1.NW_012116221v1 872092 78 + 2368649 gcagcagcggccgctctgacagcttcataagcaccagcCCTCCGGGGCCCTGGCTGTTGCTGCATC---AGGAGTGCGAGC i colAng1.NW_012116221v1 I 9 C 0 s calJac3.chr3 189605177 78 - 190850796 GCAGCAGCGGCTGCTCTGACGACTTCATGAGCACCAGTAATCCTGGGCCCTGACTCTTGCTGTATC---AGGAGTGTGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094031 77 - 14256875 GCAGCAGCGGCTGCTCTGACGGCTTCATGAGCACCAGTAATCCTGGGCCC-GACTCCTGCTGTATC---AGGAGTGTGAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989658 78 - 2196201 GCAGCAGCGGCTGCTCTGATGGCTTCATGAGCACCAGTAATCCTGAGCCCTGACTCTGGCTGTATC---AGGAATGTGAGC i cebCap1.NW_016107886v1 C 0 I 104 s aotNan1.NW_018492112v1 3384158 78 - 5030052 GCAGCAGCGGCTGCTCTGATGGCTTCATGAGCATCAGTAATCCTGGGCCCTGACTCTTGCTGTATC---AGGAGTGTGAGC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16944741 78 - 59632846 GCAGCAGTGGTGACTCCAGCAGCCCTGTCAGC-TTAGCACTCTTGGG--TTGACTCCTGCAGTGTTACAAGGAGTGTGGAT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=-7490.000000 s hg38.chr4_KI270789v1_alt 98763 7 + 205944 TCCT----GG-------C s panTro5.chr4 192890410 7 + 194502333 TCCT----GG-------C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774230 7 + 195804263 TCCT----GG-------C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810662 7 + 4876863 TCCT----GG-------C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700185 7 + 115148730 TCCT----GG-------C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982270 14 + 190429646 TCCC----GGCTCCCGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925032 14 + 189454096 TCCC----GGCTCCCGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312605 14 - 25927173 TCCC----GGCTCCCGGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346105 6 + 4669795 TCCC----GG-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304482 7 + 135778131 TCCC----GG-------C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757272 7 - 2847728 TCCC----GG-------C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872170 7 + 2368649 TCCC----GG-------C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605255 3 - 190850796 -CCC-------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094108 3 - 14256875 -CCC-------------- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3384236 7 - 5030052 -CCCTGGC---------- i aotNan1.NW_018492112v1 C 0 I 38 s canFam3.chr16 16944819 7 - 59632846 TCCT----AG-------A i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=235257.000000 s hg38.chr4_KI270789v1_alt 98770 66 + 205944 TTCCTGTgcagtggcagtggcagtgctcactgcatccggcagtggcTAAAGAAGG-ACTCCAGCCTC s panTro5.chr4 192890417 66 + 194502333 TTCCTGCGCAGTGGCAGCGGCAGTGCTCACTGCACCCGGCAGTGGCTAAAGTAGG-ACTCCAGCCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774237 66 + 195804263 TTCCTGCGCAGTGGCAGCGGCAGTGCTCACTGCACCCGGCAGTGGCTAAAGTAGG-ACTCCAGCCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810669 66 + 4876863 TTCCTGTGCAGTGGCAGCGGCAGTGCTCATTGCACCCGGCAGTGGCTAAAGAAGG-ACTCCAGCCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700192 67 + 115148730 TTCCTGAGCGGTGGCAGCGGCAGTGCTCACTGCAGCCGGCAGTGGCTAAAGAAGGAACTCCAGCCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982284 67 + 190429646 TTCCTGCGAagtggcagcggcagtgctcactgcagccggcagcggcTAGAGCAGGAGCTCCAGCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925046 67 + 189454096 TTCCTGCGAagtggcagcggcagtgctcactgcagccggcagcggcTAGAGCAGGAGCTCCAGCATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312619 67 - 25927173 TTCCTGCGAagtggcagcggcagtgctcactgcagccggcagcggcTAGAGCAGGAGCTCCAGCATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346111 46 + 4669795 ---------------------AGTGCTCACTGCAGCCGGCAGCGGCTAGAGCAGGAGCTCCGGCATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304489 42 + 135778131 CTCCTGCGAAGT-------------------------GGCAGCGGCTAGAGCAGGAACTCCAGCATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757279 42 - 2847728 TTCCTGCGAAGT-------------------------GGCAGCGGCTAGAGCAGGAGCTCCGGCATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872177 42 + 2368649 TTCCTGCGAAGT-------------------------GGCAGCGGCTAGAGAAGGAACTCCAGCATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605258 42 - 190850796 -----------TGGCAGCTGCAGCGCTCCCTGCAC----CCGTGGGTAAAGAAGGAA---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094111 41 - 14256875 ------------GGCAGCCGCAGTGCTCCCTGCAC----CAGTGGGTAAAGAAGGAA---------- i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16944826 36 - 59632846 ------------------------------TGCCATCAGCAGTGGCTCTGG-AGGAACTCTAGCAGC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3384243 38 - 5030052 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=413836.000000 s hg38.chr4_KI270789v1_alt 98836 43 + 205944 CTCAGCC-CACAGCTGCGTGGACTTGGGGCTACACCATTGCTCT s panTro5.chr4 192890483 43 + 194502333 CTCAGCC-CACAGCCGCGTGGACTTGGGGCTACACCATTGCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774303 43 + 195804263 CTCAGCC-CACAGCCGCGTGGACTTGGGGCTACATCATTGCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810735 43 + 4876863 CTCAGCC-CACAGCCGCATGGACTTGGGGCTACACCATTGCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700259 43 + 115148730 CTCAGCC-CACAGCCGTGTGGACTTGGGGTTACACCATTGCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982351 43 + 190429646 CTCAGCC-CACAGCCGCGTGGACTTAGGGTCACACCATTGCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925113 43 + 189454096 CTCAGCC-CACAGCctcgtggacttagggtcacaccattgctct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312686 43 - 25927173 CTCAGCC-CACAGCCGCGTGGACTTAGGGTCACACCATTGCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346157 43 + 4669795 CTCAGCC-CACAGCCGCCTGGACTTAGGGTCACACCATTGCTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304531 43 + 135778131 CTCAGCC-CACAGCCGCGTGGACTTAGGGTCACACCATTGCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757321 43 - 2847728 CTCAGCC-CACAGCCGCGTGGACTTAGGGTCACACCATTGCTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872219 43 + 2368649 CTCAGCC-CACAGCCGCGTGGACTTGGGGTTACACCGTTGCTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605300 43 - 190850796 CTCAGCC-CACAGCCACGTGGACTTAGGGTTATACCATTGCTCT i calJac3.chr3 C 0 I 14 s saiBol1.JH378165 13094152 43 - 14256875 CTCAGCC-CACAGCCACGTGGACTTAGGGTTATAGCATTGCTCT i saiBol1.JH378165 C 0 I 15 s aotNan1.NW_018492112v1 3384281 43 - 5030052 CTCAGCC-CACAGCCACGTGGACTTAGGGTTATACCATTGCTCT i aotNan1.NW_018492112v1 I 38 I 15 s canFam3.chr16 16944862 44 - 59632846 CACAGCAGCACACCCATGTGGATATGGGGTCACATCATCTCCCT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=514830.000000 s hg38.chr4_KI270789v1_alt 98879 114 + 205944 TTGGGGTTGTTT--TTGGCTCATGGGGTGGTTGTGGCATCCTGAAGTTACGAACAGCAGTTACGAACagcagttcctcaggtaccagtcttt--ggggagcctcatcccc---------------------------------------------------------------------------------ttgttgtt------------ s panTro5.chr4 192890526 114 + 194502333 TTGGGGTTGTTT--TTGGCTCATGGGGTGGTTGTGGCATCCTGCAGTTACGAACAGCAGTTACGAACagcagttcctcaggtaccagtctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774346 114 + 195804263 TTGGGGTTGTTT--TTGGCTCATGGGGTGGTTGTGGCATCCTGCAGTTACGAACAGCAGTTACGAACagcagttcctcaggtaccagtctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810778 114 + 4876863 TTGGGGTTGTTT--TTGGCTCATGGGGTGGTTGTGGCATCCTGCAGTTATGAACAGCAGTTATGAACagcagttcctcaggtaccagtctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700302 101 + 115148730 TTGGGGTTGTTT--TTGGCTCATGGAGTGGTTGTGGCATCCT-------------GCAGTTACGAACagcagttcctcaggtaccagtctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982394 100 + 190429646 TTGGGTTTGTTT--TTGGCTCAAGGAGTGGTTGTGGCATCCT-------------GCAGTTACTAACAGGAGCTCCTCGGGtgccaatctct--ggggagcctcatcccc----------------------------------------------------------------------------------tcttgtt------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925156 100 + 189454096 ttgggtttgttt--ttggctcaaggagtggttgtggcatcct-------------gcagttactaacaggagctcctcgggtgccaatctct--ggggagcctcatcccc----------------------------------------------------------------------------------tcttgtt------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312729 100 - 25927173 TTGGGGTTGTTT--TTGGCTCAAGGAGTGGTTGTGGCATCCT-------------GCGGTTACTAACAGGAGCTCCTCGGGtgccaatctct--ggggagcctcatcccc----------------------------------------------------------------------------------tcttgtt------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346200 98 + 4669795 TTGGG---GTTT--TTGgctcaaggagtggttgtggcatcct-------------gcagttactaacaggagttcctcgggtaccaatctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304574 101 + 135778131 TTGGGGTTGTTT--TTGGCTCAAGGAGTGGTTGTGGCATCCT-------------GCAGTTACAAACAGGAGttcctcgggtaccaatctct--ggggagcctcatcgcc---------------------------------------------------------------------------------ttcttgtt------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757364 98 - 2847728 TTGGG---GTTT--TTGGCTCAAGGAGTGGTTGTGGCATCCT-------------GCAGTTACTAACAGGAGTTCCTCGGGTACCAATCTCT--GGGGAGCCTCATCCCC---------------------------------------------------------------------------------TTCTTGTT------------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872262 101 + 2368649 TTGAGGTTGTTT--TTGgctcaaggagtggttgtggcctcct-------------gctgttactaacaggagttcctcgggtaccagtctct--ggggagcctcatcccc---------------------------------------------------------------------------------ttcttgtt------------ i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16944906 190 - 59632846 -----TTTGTTTCCTTGGCCTTGGGAGTGGTGATGGCATTCT-------------GAAGTTACTAATGGCAGTAAATTCTG---CAATTTCTAGGGGGAACTTCATtttctttctttctttctttctttctttctttctttctttctttctttctttctttctttttttttttcttttctttcttctttctttcttttttcctctttcctt i canFam3.chr16 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e mm10.chr8 86576022 9452 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=33886.000000 s hg38.chr4_KI270789v1_alt 98993 12 + 205944 cctgcctggc---------------------------------------------------tt s panTro5.chr4 192890640 12 + 194502333 cctgcctggc---------------------------------------------------tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774460 12 + 195804263 cctgcctggc---------------------------------------------------tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810892 12 + 4876863 cctgcctggc---------------------------------------------------tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700403 16 + 115148730 ccttcctggctgc-----------------------------------------------ttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982494 16 + 190429646 cctgcctggctgc-----------------------------------------------ttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925256 16 + 189454096 cctgcctggctgc-----------------------------------------------ttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312829 16 - 25927173 cctgcctggctgc-----------------------------------------------ttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346298 16 + 4669795 cctgcctggctgc-----------------------------------------------ttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304675 16 + 135778131 cctgcctggctgc-----------------------------------------------ttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757462 16 - 2847728 CCTGCCTGGCTGC-----------------------------------------------TTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872363 16 + 2368649 cctgcctggctgc-----------------------------------------------ttt i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86585474 9 - 129401213 cctgCCAG------------------------------------------------------T i mm10.chr8 I 9452 C 0 s canFam3.chr16 16945096 63 - 59632846 ccttccttccttctctttttttttGTCTATACATTTTTGTTAATTTTTTTGTCTATAGATttt i canFam3.chr16 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e dasNov3.JH570353 1438131 11 - 2520184 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=874339.000000 s hg38.chr4_KI270789v1_alt 99005 131 + 205944 tttgtgacgtttaaaaccaatgttcaaatccaatgtgtttggaatgcttagaattggttttgttttcctaactggacAC--GAG-AGACACAAGCACTACGCGATCCTTCTACGTCATGCTCTTAAAAA---ATATG s panTro5.chr4 192890652 131 + 194502333 tttgtgacgtttaaaaccaatgttcaaatccaatgtgtttgaaatgcttagaattggttttgttttcctaactggacAC--GAG-AGACACAAGCACTACGCGATCCTTCTACGTCATGCTCTTAAAAA---ATACG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774472 131 + 195804263 tttgtgacgtttaaaaccaatgttcaaatccaatgtgtttgaaatgcttagaattggttttgttttcctaactggacAC--GAG-AGACACAAGCACTACGCGATCCTTCTACGTCATGCTCTTAAAAA---ATACG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3810904 131 + 4876863 tttgtgacgtttaaaaccaatgttcaaatccaatgtgtttgaaatgcttagaactggttttgttttcctaactggacAC--GAG-AGACACAAGCACTACGCAATCCTTCTACGTCATGCTCTTAAAAA---ATCCG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700419 131 + 115148730 tttgtaacgtttaaaatcaatgttcaaatccaatgtgtttgaaatgcttagaactggttttgttttcctaactggacAG--GAG-ACACACAAGCACTACGCCATCCTTCTACGTCATGCTCTTAAAAA---ATACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982510 131 + 190429646 tttgtaatatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggttttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGATACTTCTACGTCATGCTGTTAAAAA---ATACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925272 131 + 189454096 tttgtaatatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggttttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGATACTTCTACGTCATGCTGTTAAAAA---ATACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312845 131 - 25927173 tttgtaatatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggttttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGATACTTCTACGTCATGCTGTTAAAAA---ATACG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346314 131 + 4669795 tttgtaatatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggctttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGGTACTTCTACGTCATGCTGTTAAAAA---ATACG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304691 131 + 135778131 tttgtaatatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggctttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGATACTTCTATGTCATGCTGTTAAAAA---ATACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757478 131 - 2847728 TTTGTAATACTTAAAATCAATGTTCAAATCCAGTGCGTTTGAAATGCTTAGAATTGGCTTTGTTTTCCTAACTGGGCAC--AAG-AGACACAAGCACTACGAGATACTTCTACGTCATGCTGTTAAAAA---ATACG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872379 131 + 2368649 tttgtactatttaaaatcaatgttcaaatccagtgtgtttgaaatgcttagaattggttttgttttcctaactgggcAC--AAG-AGACACAAGCACTACGAGATACTTCTACGTCATGCTGTTAAAAA---ATATG i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86585483 115 - 129401213 TTCGTTTTGTTGATCACTGACTTTCAAATTCAAGTCGCTTAAAAGAC--AGAATTCTTTTTGGTTTCCTAACAGGTCAT--G----TCCATAACCAAGAACAATTTCCCCTAC-----------AACAC---ATACA i mm10.chr8 C 0 C 0 s canFam3.chr16 16945159 132 - 59632846 tttgttacttttataaccaattatctaataaaatctatttgaaatacctagagttgtatttgtttttctaactggacAT--GGGTAGACACAAGCAATGTATGGTACTCCTAGATCCTGCTCTCAAAAA---TTATC i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1438142 135 - 2520184 TTTGTCTCTTTCACAACCAATTTCCCCATCCAATCTGTTTTAAATACTTTG-GCTGGTTTTGTTATCATAACTGGACACTGAAA-AAAAACAAGCACTTTGTGACACTCTTATACCATGCTCTTTAAAAATCATACA i dasNov3.JH570353 I 11 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3922541 1875 + 3993831 I e micMur3.chr14 17500049 1714 - 93316391 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=596407.000000 s hg38.chr4_KI270789v1_alt 99136 90 + 205944 GCAAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTCCCGTGAAACTGACAATATACAAAGACCAGCGTGTG----------TGG----G--------GCCCTGGAATATGTC s panTro5.chr4 192890783 90 + 194502333 GCAAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCGTGAAACTGACAATATACAAAGACCAGCGTGTG----------TGG----G--------GCCCTGGAATATGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774603 90 + 195804263 GCAAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCGTGAAACTGACAATATACAAAGACCAGCGTGTG----------TGG----G--------GCCCTGGAATATGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811035 90 + 4876863 GCAAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCGTGAAACTGACAATATACAAAGACCAGCGTGTG----------TGG----G--------GCCCTGGAATATGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700550 90 + 115148730 GCAAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATACAAAGACCAGCGTATG----------TGG----G--------GCCCTGGAATATGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982641 102 + 190429646 ACCCAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAAAGACCAGTGTGTGTGTGT-----TGG----G-GGGGGGGGTCCTGGAATATGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925403 103 + 189454096 ACCCAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAAAGACCAGTGTGTGTGTGT-----TGG----GCGGGGGGGGTCCTGGAATATGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24312976 101 - 25927173 ACCCAGCTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAAAGACCAGTGTGTGTGTGT-----TGG------GGGGGGGGTCCTGGAATATGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346445 107 + 4669795 ACCCAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAAAGACCAgtgtgtgtgtgtgtgtgtgt----g-GGGGGGGGTCCTGGAATATGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304822 105 + 135778131 ACCAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAAAGACC--tgtgtgtgtgtgtgtgtgG----G-GTGGGGCGTCCTGGAATATGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757609 111 - 2847728 ACCCAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTTTCCATGAAACTGACAATATAGAACGACCAgtgtgtgtgtgtgtgtgtgggggtg-GGGGGGCATCCTGGAATATGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872510 95 + 2368649 ACCAAGTTTTACA-TTATTCATCCA--TTTCTGC---TGTATCCATGAAACTGACAATATAGAAAGACCAGTGTGTGTG--------TGG----G-----GGGGCCCTGGAATATGTC i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3924416 92 + 3993831 GCAAAGTTTTACG-TTATTCATCAAGTTTTCTGC---TGTTTCTATGAAAGTGATAATATTCAAAGACTATTGTATG----------TGA----G--------GCCCTGGAATCTATC i proCoq1.NW_012145301v1 I 1875 C 0 s mm10.chr8 86585598 89 - 129401213 GCAGGCTTTTATT-TGATTCATGAA--TAACTGTTTGTAATTCTATGAAAGTGGTTTCTTCTGAATCCTAGTGTTTG----------TGG----A--------GTCCCAGGATC---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16945293 92 - 59632846 AGAAAGTTTTACA-TTATTCACCAAGTGTTGTGC---TGTTTCTAGGACAGTGACAATATACAAAGACTAGTTTATG----------TGA----A--------GCCCTGGAATCTGCC i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1438277 90 - 2520184 ATAAAGTTTTACATTTATTTACCAA--GGTTT-C---TGTGTCCATAAAAGTTACAACGCACAAAGACTTGTATATC----------TGA----G--------GGCCTGAAATCAGTC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e micMur3.chr14 17500049 1714 - 93316391 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=371624.000000 s hg38.chr4_KI270789v1_alt 99226 37 + 205944 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT s panTro5.chr4 192890873 37 + 194502333 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774693 37 + 195804263 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811125 37 + 4876863 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700640 37 + 115148730 AGTTTATATTTCTATCGTG-TCAGTTTTCTTAGGGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982743 37 + 190429646 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925506 37 + 189454096 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313077 37 - 25927173 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346552 37 + 4669795 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304927 37 + 135778131 AGTTTATATTTCTATTGTG-TCAGTTTTATTAGGGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757720 37 - 2847728 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872605 37 + 2368649 AGTTTATATTTCTATTGTG-TCAGTTTTCTTAGGGTAT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17501763 37 - 93316391 AGTTTATATTTTTATTGTG-TCAATTTCCTTAGAATAT i micMur3.chr14 I 1714 C 0 s proCoq1.NW_012145301v1 3924508 37 + 3993831 AGTTTATATTTTTATTAGG-TCAATTTCCTTAGAGTAT i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86585687 36 - 129401213 AGCCTATATTTCTACTGTA-TGAATTTTCGCA-AGCAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16945385 37 - 59632846 AGCTTATATTTTTATTATG-CCAGTTTCTGTAGAGTAT i canFam3.chr16 C 0 I 174 s dasNov3.JH570353 1438367 38 - 2520184 AGGTTATAGTTCTATTATACTGAATTTCCTTAGAGCAT i dasNov3.JH570353 C 0 I 4 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=492168.000000 s hg38.chr4_KI270789v1_alt 99263 56 + 205944 A----TGG----CGAATATAAATA----TGACTATTATAATTAAGTGGCTGTGCATTTTCATATTAGA s panTro5.chr4 192890910 56 + 194502333 A----TGG----CGAATATAAATA----TGACTATTATAATTAAGTGGCTGTGCATTTTCACATTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774730 56 + 195804263 A----TGG----CGAATATAAATA----TGACTATTATAATTAAGTGGCTGTGCATTTTCACATTAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811162 56 + 4876863 A----TGG----CGAATATAAATA----TGACTATTATAATTAAGTGGCTGTGCATTTTCATATTAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700677 56 + 115148730 A----TGG----TGAATATAAATA----TGACTATTATAATTAAGTGGCTGTGCATTTTCATATTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982780 56 + 190429646 A----TGG----TGAATATAAATA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCGTATTAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925543 56 + 189454096 A----TGG----TGAATATAAATA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCGTATTAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313114 56 - 25927173 A----TGG----TGAATATAAATA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCGTATTAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346589 56 + 4669795 A----TGG----TGAATATAAATA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCATATTAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134304964 56 + 135778131 A----TGG----TGAATATAAATA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCATATTAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757757 54 - 2847728 A----TGG----TGAATATAAATA----TGAC--TTCTAATTAAGTGGCTGTGTATTTTCATATTAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872642 56 + 2368649 A----TGG----TGACTATAACTA----TGACTATTCTAATTAAGTGGCTGTGCATTTTCATATTAGA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17501800 60 - 93316391 ATAACTAG----TGAATGTAAATA----TCACTACTATGATTATGTGGCTGTGCATTTTTGTATTAGA i micMur3.chr14 C 0 I 537 s proCoq1.NW_012145301v1 3924545 56 + 3993831 A----TAG----TGAATGTAAATA----TCACTACTATGATTAAGTGGCTGTGCATTTTCATATTAGA i proCoq1.NW_012145301v1 C 0 I 18417 s mm10.chr8 86585723 64 - 129401213 G----TGAGCACTGAATATCAATACTACTTACTGTTAGCATCAAATCACTATGCATGTTTATGCCAGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16945596 56 - 59632846 a----TAG----TGAATACAAATA----TTACTATTATGATTAAGTAGCTATGCATTTTCATATTAGA i canFam3.chr16 I 174 C 0 s dasNov3.JH570353 1438409 30 - 2520184 A----TAG----TGACTATAAATA----TCACTGT--------------------------AATTAGA i dasNov3.JH570353 I 4 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=354026.000000 s hg38.chr4_KI270789v1_alt 99319 47 + 205944 ATTCATTATGTTGCCTTCTCAGTAGAAGCACTTTCTATGTAGTGCTT s panTro5.chr4 192890966 47 + 194502333 ATTCATTATGTTGCCTTCTCAGTAGAAGCACTTTCTGTGTAGTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774786 47 + 195804263 ATTCATTATGTTGCCTTCTCAGTAGAAGCACTTTCTGTGTAGTGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811218 47 + 4876863 ATTCATTATGTTGCCTTCTCAGTAGAAGCACTTTCTGTGTAGTGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700733 47 + 115148730 ATTCATTATGTTGCCTTCTTAGTACAAGCACTTTCTGTGTAGTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982836 47 + 190429646 ATTCATTATGTTGCCTTCTCAGTACAAGCACTTCCTGTGTAGTGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925599 47 + 189454096 ATTCATTATGTTGCCTTCTCAGTACAAGCACTTCCTGTGTAGTGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313170 47 - 25927173 ATTCATTATGTTGCCTTCTCAGTACAAGCACTTTCTGTGTAGTGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346645 47 + 4669795 ATTCATTATGTTGCCTTTTCAGTACCAGCACTTTCTGTGTATTGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305020 47 + 135778131 ATTCATTATGTTGCCTTCTCAGTACAAGCACTTTCTGTGTAGTGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757811 47 - 2847728 ATTCATTATGTTGCCTTCTCAGTACCAGCACTTTCTGTGTAGTGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872698 47 + 2368649 ATTCATTATGTTGCCGTCTCAGTACAAGCACTTTCTATGTGGTGCTT i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86585787 47 - 129401213 TCTCATTATGTAGCATTCTCAGTAAAGGCTTCTTCTGTGTAGAACTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16945652 47 - 59632846 GCTAATTATGTAACTTTCTTAGTACAAGTTATTTCTGTATAGAACTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1438439 47 - 2520184 GCTTATTATACTGCTTTCTTAGTAGAAGTTCTCTCAATCTAGAGCTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225681 13 - 11315646 I a score=67417.000000 s hg38.chr4_KI270789v1_alt 99366 11 + 205944 -GAGcatatagg-- s panTro5.chr4 192891013 11 + 194502333 -GAGcatatagg-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774833 11 + 195804263 -GAGcatatagg-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811265 11 + 4876863 -GAGcatatagg-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700780 11 + 115148730 -GAGcatatagg-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982883 11 + 190429646 -GAGcacgtagg-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925646 11 + 189454096 -GAGcacgtagg-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313217 11 - 25927173 -GAGcacgtagg-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346692 11 + 4669795 -GAGcatgtagg-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305067 11 + 135778131 -GAGcatgtagg-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757858 11 - 2847728 -GAGcatgtagg-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872745 11 + 2368649 -GAGcatgtagg-- i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11225694 11 - 11315646 -GAGcacgtaag-- i otoGar3.GL873580 I 13 C 0 s mm10.chr8 86585834 11 - 129401213 -GTACATGGACT-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16945699 11 - 59632846 -ATACATATATG-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1438486 14 - 2520184 GTATTGTATAGAGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=761645.000000 s hg38.chr4_KI270789v1_alt 99377 109 + 205944 taagtcaggtggccacctgcacagtgtgatttgaaggtgt-gaaggtatctctctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTTCATATTCTGTAGTG-AAAAAAATAca s panTro5.chr4 192891024 109 + 194502333 taagtcaggtggccacctgcacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTTCATATTCTGTAGTG-AAAAAAATAca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774844 109 + 195804263 taagtcaggtggccacctgcacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTTCATATTCTGTAGTG-AAAAAAATAca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811276 109 + 4876863 taagtcaggtggccacctgcacagtgtgatttgaaggtgt-gaaggtatctctctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTTCATATTCTGTAGTG-AAAAAGATAca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700791 110 + 115148730 taagtcaggtggccacctgcacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTGGTGATTAAATTTAATAGGTGCATATTTTGTAGTGAAAAAAAATAca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188982894 109 + 190429646 taagtcaggaggccacctccacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTAATG-AAAAAAACAca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925657 109 + 189454096 taagtcaggaggccacctccacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTAATG-AAAAAAACAca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313228 109 - 25927173 taagtcaggaggccacctccacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTAATG-AAAAAAACAca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346703 109 + 4669795 taagtcaggaggccacctacacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTGGTG-AAAAACACAca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305078 109 + 135778131 taagtcaggaggtcacctacacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTGGTG-AAAAACACAca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757869 109 - 2847728 taagtcaggaggccacctccacagtgtgatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTGGTG-AAACACACAca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872756 110 + 2368649 taagtcaggaggccacctacacagcgggatttgaaggtgt-gaaggtatctatctg-cc-tc-aaaTAGCGATTAAATTTAACAGGTGCATATTCTGTAGTGAAAAAAAACAca i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11225705 108 - 11315646 taaggcaagcgaccacctgtgcagtctgattggaaaatgt-gaaagtatctttctgccc-cc-aaatatctGTTAAGGGTAACAGGCATATATTCTCTAGTG-AAAGAA--Aca i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86585845 109 - 129401213 GATGGCATGAAGCCAGCGCTGCAATAT--TTTCAAGGCGTGGAAGTTATCTATCTG-TAGTA-AAATGGCTATAAAACTTAATAGGCATGTATTGTATAGAG-AAAGAAACATA i mm10.chr8 C 0 I 128 s dasNov3.JH570353 1438500 101 - 2520184 TAAGGCAGAGAGTCACCTTGGCATTGC--------TGTGT-GAAAA-ATCTATCTG-CT-GCAAAACAGCAATTAAATTTAATAGATGTCTATTCTCTAGTG-AAAAAAataca i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=456290.000000 s hg38.chr4_KI270789v1_alt 99486 83 + 205944 --------gttggccctccatatccacgggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATCTGCA s panTro5.chr4 192891133 83 + 194502333 --------gtcggccctccatatccacgggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATCTGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192774953 82 + 195804263 --------gtcggccctccatatccacgggttctgcatccatggattcaaccaaccaaggat--aaaatatt--------TTTTAAAAATTGCATCTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811385 82 + 4876863 --------gtcggccctccatatccacgggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAA-TGCATCTGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700901 83 + 115148730 --------gtcggccctccatatccacgggttctgcatccatggattcaaccaaccaaggat-aaacatatt--------TTTTAAAAATTGCATCTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188983003 78 + 190429646 --------gtcggccctccatat-----ggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATTTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925766 78 + 189454096 --------gtcggccctccatat-----ggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATTTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313337 78 - 25927173 --------gtcggccctccatat-----ggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------tttaaaaaaTTGCATTTGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346812 78 + 4669795 --------gtcggccctccatat-----ggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATTTGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305187 78 + 135778131 --------gtcagccctccatat-----ggttctgcatccatggattcaaccaaccaaggat-aaaaatatt--------TTTTAAAAATTGCATTTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2757978 78 - 2847728 --------gtcggccctccatat-----ggttctgcatccatggattcaaccaaccacggat-aaaaatatt--------TTTTAAAAATTGCATTTGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872866 77 + 2368649 --------gtcggccctccatat-----ggttctgcatccatggatgcaaccaaccaaggat-gaaaatatt--------ttt-aaaaaTTGCATTTGCA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11225813 84 - 11315646 --------gcccgttttctgtgtccaggagctccacaggcacaaattcaaccaattacagatcaaaaatatt--------taaaaaaaattgcatctgta i otoGar3.GL873580 C 0 I 753 s dasNov3.JH570353 1438601 81 - 2520184 gacacacaggtatatatacatat-----aggtgtatatttat-----------actat--at-aaaaatattacatataACTCAAAGGATTGTTCTAAAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=178979.000000 s hg38.chr4_KI270789v1_alt 99569 31 + 205944 AGTTAATTATAATATAATGCTCAAGAAAATT s panTro5.chr4 192891216 31 + 194502333 AGTTAATTGTAATATAATGCTCAAGAAAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775035 31 + 195804263 AGTTAATTGTAATATAATGCTCAAGAAAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811467 31 + 4876863 AGTTAATTATAATATAATGCTCAAGAAAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112700984 26 + 115148730 AGTTAAT-----TATAATGCTCAAGAAAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188983081 31 + 190429646 AGTTAGTTAAAATATAATGCTCAAGAAAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187925844 31 + 189454096 AGTTAATTAAAATATAATGCTCAAGAAAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313415 31 - 25927173 AGTTAATTAAAATATAATGCTCAAGAAAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346890 31 + 4669795 AGTTAATTAAAATATAATGCTCAAGAAAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305265 31 + 135778131 AGTTAATTAAAATATAATGCTCAAGAAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2758056 31 - 2847728 GGTTAATTAAAATATAATGCTCAAGAAAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 872943 31 + 2368649 AGTTAATTAAAATACAATGCCCAAGAAAATT i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1438682 31 - 2520184 ACTTAATTAAACCATAACAACCAAAATAATT i dasNov3.JH570353 C 0 I 16 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=2181017.000000 s hg38.chr4_KI270789v1_alt 99600 401 + 205944 CACAACATGAATGAAATGTTACAGAAGTTATAAATCCATTGCATTTATCAGTAGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTACAAAGAAACATTGAAGTGAGAATTTTGTGGGTACTCTTTAAACAATAGTACATGAGTTTAATACATATTTTTTAAAGCCAGTAAATAACATTTTTCTGTGTCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTTAAATTGTTCTGTGATTAATCGGCCATTGAAAATGACCTTTTTAATTGTTGAGATTTACTGACTAGCCTTATATGGAAGGATTTGTATATCCTCACCatatatatatatgtatatatat s panTro5.chr4 192891247 397 + 194502333 CACAACATGAATGAAATGTTACAGAAGTTATAAATCCATTGCGTTTATCAGTAGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTACAAAGAAACATTGAGGTGAGAATTTTGTGGGTACTCTTTAAACAACAGTACATGAGTTTAATACATATTTTTTAAAGCCAATAAATAACATTTTTCTCTGTCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTTAAATTGTTCTGTGATTAATCGGCCATTGAAAATGACCTTTTTAATTGTTGAGATTTACTGACTAGCCTTATATGGAAGGATTTGTGTATCCTCACC----atatatatgtatatatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775066 397 + 195804263 CACAACATGAATGAAATGTTACAGAAGTTATAAATCCATTGCGTTTATCAGTAGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTACAAAGAAACATTGAGGTGAGAATTTTGTGGGTACTCTTTAAACAACAGTACATGAGTTTAATACATATTTTTTAAAGCCAGTAAATAACATTTTTCTGTGTCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTTAAATTGTTCTGTGATTAATCGGCCATTGAAAATGACCTTTTTAATTGTTGAGATTTACTGACTAGCCTTATATGGAAGGATTTGTGTATCCTCACC----atatatatgtatatatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811498 399 + 4876863 CACAACATGAATGAAATGTTACAGAAGTTATAAATCCATTGCGTTTATCAGTAGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTACAAAGAAACATTGAGGTGAGAATTTTGTGGGTACTCTTTAAACAATAGTACATGAGTTTAATACATATTTTTTAAAGCCAGTAAATAACATTTTTCTGTGTCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTTAAATTGTTCTGTGATTAATCGGCCATTGAAAATGACCTTTTTAATTGTTGAGATTTACTGACTAGCCTTATATGGAAGGATTTGTATATCCTCACC--atatatatatgtgtatatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701010 386 + 115148730 CACAACATGAATGAAATGTTACAGAAGTTATAAATCCATTGCGTTTATCAGTAGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGGTACTCTTTAAACAACAGTACATGAGTTTAATACATATTTTTTAAAGCCAGTAAATAACATTTTTCTGTGTCCACTTT-AAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATATGTGTAGGTTTAATTTTATACAGTTTTTAAATTGTTCTGTGATTAATCGGCCATTGAAAATGACCTTTTTAATTGTTGAGATTTACTGACTGGCTTTATATGGAAGGATTTGTATATCCTCACC--------------atatacat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188983112 401 + 190429646 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTTTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTTTGTTGGGTTTATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTAAAATTGCTCTGTGATTAATTGGCCACTGAAAATGAGCTTTTTAATTGTTGAGATTTTCTTACTGGCCTCATACGGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i rheMac8.chr5 C 0 I 88 s macFas5.chr5 187925875 401 + 189454096 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTTTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTTTGTTGGGTTTATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTAAAATTGCTCTGTGATTAATTGGCCACTGAAAATGAGCTTTTTAATTGTTGAGATTTTCTTACTGGCCTCATACGGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313446 401 - 25927173 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTTTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTTTGTTGGGTTTATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTAAAATTGCTCTGTGATTAATTGGCCACTGAAAATGAGCTTTTTAATTGTTGAGATTTTCTTACTGGCCTCATACGGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3346921 401 + 4669795 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTGTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTTTGTTGGGTTTATAAGTGAATTGGACTGTATTTCTAGTATGTGTGTAGGTTTAATTTTATATAGTTTTAAAATTGCTCTGTGATTAATTGGCCACTGAAAATGAGCTTTTTAATTGTTGAGATTTTCTTACTGGCCTCATACAGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305296 397 + 135778131 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTTTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTTTGTAGGTTTAATTTTATATAGTTTTTAAATTGCTCTGTG----ATTGGCCACTGAAAATGAGCTTTTTAATTGTTGAGATTTTCTTACTGGCCTCATATGGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i chlSab2.chr7 C 0 I 74 s manLeu1.NW_012102221v1 2758087 394 - 2847728 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCA---CTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGATACTCTTTAAACAACAGTACATCGGTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATAGAGTTTTAAAATTGCTCTGTGATTAATTGGCCACTGAAAATGAGCTTT----TTGTTGAGATTTTCTTACTGGCCTCATACGGAAGGATTTGTATATCCTCACCatatatatatttgtatatatat i manLeu1.NW_012102221v1 C 0 I 93 s colAng1.NW_012116221v1 872974 389 + 2368649 CACAACATGAATGAAATGTTACAGAAGCTATAAATCTATCGGGTTTATCAGTCGCTCATTTTTGAAAAGGGTCTTTGGATTATAGATTTCCACTTCTTTTGCAAAGAAACATTGAGGTGAGAATTTTGTGGGTACTCTTTAAACAACA--------GTTTAATATGTATTTTTTTAAGCCTGTAAATAAAATTTTTCTGTATCCACTTTAAAGTGTGTTGGGTATATAAGTGAATTGGACTGTATTTCTAATATGTGTGTAGGTTTAATTTTATATAGTTTTAACATTGTTCTGTG----ATTGGCCACTGAAAATGAGCTTTTTAATTGTTCAGATTTTCTTACTGGCCTCATACGGAAGGATTTGTATATCCTCACtatatatatatttatatatatat i colAng1.NW_012116221v1 C 0 I 83 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=1866.000000 s hg38.chr4_KI270789v1_alt 100001 3 + 205944 ata s panTro5.chr4 192891644 3 + 194502333 aaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775463 3 + 195804263 aaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811897 3 + 4876863 ata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701396 3 + 115148730 ata i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187926276 3 + 189454096 tta i macFas5.chr5 C 0 I 6 s macNem1.NW_012013133v1 24313847 3 - 25927173 tta i macNem1.NW_012013133v1 C 0 I 6 s cerAty1.NW_012001672v1 3347322 3 + 4669795 tta i cerAty1.NW_012001672v1 C 0 I 94 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 873363 83 + 2368649 I e manLeu1.NW_012102221v1 2758481 93 - 2847728 I e chlSab2.chr7 134305693 74 + 135778131 I e rheMac8.chr5 188983513 88 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=6987.000000 s hg38.chr4_KI270789v1_alt 100004 5 + 205944 aatat s panTro5.chr4 192891647 5 + 194502333 aataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775466 5 + 195804263 aatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811900 5 + 4876863 aatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701399 5 + 115148730 aatat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187926285 5 + 189454096 tatat i macFas5.chr5 I 6 I 21 s macNem1.NW_012013133v1 24313856 5 - 25927173 aatat i macNem1.NW_012013133v1 I 6 I 79 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 873363 83 + 2368649 I e manLeu1.NW_012102221v1 2758481 93 - 2847728 I e chlSab2.chr7 134305693 74 + 135778131 I e cerAty1.NW_012001672v1 3347325 94 + 4669795 I e rheMac8.chr5 188983513 88 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=584.000000 s hg38.chr4_KI270789v1_alt 100009 24 + 205944 aaatataaatatatatG----GTGtatc------------ s panTro5.chr4 192891652 11 + 194502333 aaatataaata----------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775471 11 + 195804263 aaatataaata----------------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811905 24 + 4876863 aaatataaatatatatg----gtgtata------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701404 20 + 115148730 aaatatatata----tg----gcatata------------ i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187926311 40 + 189454096 atatatatttatatatgcaccatatatatttatttgtatt i macFas5.chr5 I 21 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 873363 83 + 2368649 I e manLeu1.NW_012102221v1 2758481 93 - 2847728 I e chlSab2.chr7 134305693 74 + 135778131 I e cerAty1.NW_012001672v1 3347325 94 + 4669795 I e macNem1.NW_012013133v1 24313861 79 - 25927173 I e rheMac8.chr5 188983513 88 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=10869.000000 s hg38.chr4_KI270789v1_alt 100033 6 + 205944 tatatg s panTro5.chr4 192891663 6 + 194502333 tatatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775482 6 + 195804263 tatatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811929 6 + 4876863 tatatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701424 6 + 115148730 tatatg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187926351 6 + 189454096 tatata i macFas5.chr5 C 0 I 12 s colAng1.NW_012116221v1 873446 6 + 2368649 tatatg i colAng1.NW_012116221v1 I 83 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e manLeu1.NW_012102221v1 2758481 93 - 2847728 I e chlSab2.chr7 134305693 74 + 135778131 I e cerAty1.NW_012001672v1 3347325 94 + 4669795 I e macNem1.NW_012013133v1 24313861 79 - 25927173 I e rheMac8.chr5 188983513 88 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=19332.000000 s hg38.chr4_KI270789v1_alt 100039 5 + 205944 gtgca s panTro5.chr4 192891669 5 + 194502333 gtgca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775488 5 + 195804263 gtgca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811935 5 + 4876863 gtgta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701430 5 + 115148730 gtgca i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187926369 5 + 189454096 gtgca i macFas5.chr5 I 12 C 0 s macNem1.NW_012013133v1 24313940 5 - 25927173 gtgca i macNem1.NW_012013133v1 I 79 C 0 s cerAty1.NW_012001672v1 3347419 5 + 4669795 gtgca i cerAty1.NW_012001672v1 I 94 C 0 s manLeu1.NW_012102221v1 2758574 5 - 2847728 gtgca i manLeu1.NW_012102221v1 I 93 C 0 s colAng1.NW_012116221v1 873452 5 + 2368649 atgca i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e chlSab2.chr7 134305693 74 + 135778131 I e rheMac8.chr5 188983513 88 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=5005.000000 s hg38.chr4_KI270789v1_alt 100044 1 + 205944 t s panTro5.chr4 192891674 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775493 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811940 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701435 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188983601 1 + 190429646 t i rheMac8.chr5 I 88 C 0 s macFas5.chr5 187926374 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313945 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3347424 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2758579 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 873457 1 + 2368649 t i colAng1.NW_012116221v1 C 0 I 8 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e chlSab2.chr7 134305693 74 + 135778131 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=2679169.000000 s hg38.chr4_KI270789v1_alt 100045 527 + 205944 atatatagcgtgtgtgtatatatgtatttggtatatctatggtgcata--tatttggtatatatatg----gtgtgtgtatatacacatatacataccatatatacac-------------------acacatatatataCCATCTTTTATTTGTGTGGTGAAAAATACTCTTTTTTGGTGTAAAAAGTTTATTTTCTTTGCTAATAATGTCAGTTTGTaa-aaaaaagaattcatccttactgaatatctatagacctttttggtcagtattccctaaacaacgcagtataagaactatttacgtagcattcacattgtattaggtattataagtaatttaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactatgccattttatatcagggtcttgagcatccacggattttgatattagcaggaggtcctggaaccaattccacatggatacagagggacg--tctCTCTCTCTCTTTGATATTGttatattatatcatattatttatattatatatttatatattggtaata s panTro5.chr4 192891675 528 + 194502333 atatata--gtgtgtgtatatatgtatttggtatatctatggtgcata--tatttggtatatatatggtgtgtgtgtgtatatatacacatacacaccatatatacac-------------------acacatatatataCCACCTTTTGTTTGTGTGGTGAAAAATACTCTTTTTTGGTGTAAAAAGTTTATTTTCTTTGCTAATAATGTCAGTTTGT-A-AAAAAAGAATCcatccttactgaatatctatagacctttttggtcagtattccctaaacaacgcagtataagaactatttacgtagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactatgccattttatatcagggtcttgagcatccacggattttgatattagcaggaggtcctggaaccaattccacatggatacagagggatg--tctCTCTCTCTCTTTGATATTGttatattatatcatattatttatattatatatttatatattggtaata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192775494 528 + 195804263 atatata--gtgtgtgtatatatgtatttggtatatctatggtgcata--tatttggtatatatatggtgtgtgtgtgtatatatacatatacacaccatatatacac-------------------acacatatatataCCATCTTTTGTTTGTGTGGTGAAAAATACTCTTTTTTGGTGTAAAAAGTTTATTTTCTTTGCTAATAATGTCAGTTTGT-A-AAAAAAGAATTcatccttactgaatatctatagacctttttggtccgtattccctaaacaacgcagtataagaactatttacgtagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactatgccattttatatcagggtcttgagcatccacggattttgatattagcaggaggtcctggaaccaattccacatggatacagagggatg--tctCTCTCTCTCTTTGATATTGttatattatatcatattatttatattatatatttatatattggtaata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3811941 527 + 4876863 atatata--gtgtgtgtatatatgtatttggtatatctatggtgcata--tatttggtatatatatggtgtgtgcgtgcatatatacatatacacaccatatatacac-------------------acacacatatataCCATCTTTTATTTGTGTGGTGAAAAATACTCTTTTTTGGTGTAAAAAGTTTATTTTCTTTGCTAATAATGTCAGTTTGT-A-AAAAAAGAATTcatccttactgaatatctatagacctttttggtcagtattccctaaacaacgcagtataagaactatttacatagcgttcac-ttgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactatgccattttatatcagggtcttgagcatccacggattttgatattagcaggaggtcctggaaccaattccacatggatacagagggacg--tctCTCTCTCTCTTTGATATTGTtatattatatcatattatttacattatatatttatatattggtaata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701436 549 + 115148730 gtatgtggtgtgtgtgtatatatgtatttggtatatatatggtgcata--tatttggtatatatatg--gtgtgtgtgtatatatacatatatacaccatatatatacatatatacaccatatatatacacatatatataCCATCGTTTATTTGTACGGTGAAAAATACTCTTCTTTGGTGTAAAAAGTTTATTTTCTTTGCTAATAGTGTCAGTTTGT-A-AAAAAAGAATTcatccttactgaatatctatagacctttttggtcagtattccctaaacaacacagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactatgccattttggatcagggtcttgagcatccacggattttgatgttagcaggaggtcctggaaccaattccacatggatacacagggacgtctCTCTCTCTCTCTTTGATATTGTtatattatatcatattgtttatatcatatatttatatattggtaata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188983602 508 + 190429646 atatatggtgtgtatgtatatatgtatttgatatatttatggtgcatatatatttggtatacatatggtatgtgcatgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTA--TGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTGCTAAC--TGTTAGTTTGT-A-AAAAAAGAATTCATTTTCactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatatgcaaataccgtgccgttttatatcagggtcttgagtgtccacggattttgatattagcaggaggtcctggaacaaatcgcgcatggatacagagggaTATCTCTCTCTCTATCTTTGATATTG-----TTATATCGtattatttatattatatatttatagattgttaata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187926375 508 + 189454096 atatatggtgtgtatgtatatatgtatttgatatatttatggtgcatatatatttggtatacatatggtatgtgcatgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTA--TGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTGCTAAC--TGTTAGTTTGT-A-AAAAAAGAATTcatttttactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatatgcaaatactgggccgttttatatcagggtcttgagtgtccacggattttgatattagcaggaggtcctggaacaaatcgcacatggatacagagggacATATCTCTCTCTATCTTTGATATTG-----Ttatatcatattatttatattatatatttatagattgttaatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24313946 508 - 25927173 atatatggtgtgtatgtatatatgtatttgatatatttatggtgcatatatatttggtatacatatggtatgtgcatgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTA--TGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTGCTAAC--TGTTAGTTTGT-A-AAAAAAGAATTCCTTTTtactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatgtgcaaatactgtgccgttttatatcagggtcttgagtgtccacggattttgatattagcaggaggtcctggaacaaatcgcacatggacacagagggacATCTCTCTCTCTCTCTTTGGTATCG-----Ttatatcatattatttatattatatatttatagattgttaata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3347425 510 + 4669795 atatatggtgtgtatgtatatatgtatttgatgtatttatggtgcatatatatttggtatacatatggtatgtgcgtgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTATTTGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTGCTAAC--TGTTAGTTTGT-A-AAAAAAGAATTcatttttactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatatgcaaatactgtgccgttttatatcagggtcttgagtatccacggattttgatattagcaggaggtcctggaacaaatcgcacatggatacagagggacATCTCTCTCTCTATCTTTGATATTG-----TTATATCAtattatttatattctatatttatagattgttaata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134305767 499 + 135778131 atatatggtgtgtatgtatatatgtatttgatatatttatggtgcatatatatttggtatacatatggtatgtgcgtgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTATTTGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTGCTAAC--TGTTAGTTTAT-A-AAAAAAGAATTcatttttactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatatgcaaatactgtgccgttttatatcagggtcttgagtatccacggattttgatattagcaggaggtcctggaacaaatcgcacatggatacagagggacATCTCTCTCTCtatctttgatattg-----ttatatcatattatttatattatatattt-----------ata i chlSab2.chr7 I 74 C 0 s manLeu1.NW_012102221v1 2758580 506 - 2847728 atatatggtgtgtatgtatatatgtatttgatatatttatggtgcatatatatttggtatacatatggtatgtgcgtgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTATTTGTGTGGCGAAAAATACTCTTTTTTGGTGTAAAACGTTTATTTTCTTTG----C--TGTTAGTTTGT-A-AAAAAAGAATTcatttttactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagcattcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatatgcataggttatatgcaaatactgtgccgttttatatcagggtcttgagtatccatggattttgatattagcaggaggtcctggaacaaatcgcacatggatacagggggacATCTCTCTCTCTGTCTTTGATATTG-----Ttatatcatattatttatattatatattcatagattgttaata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 873466 501 + 2368649 atatatatggtgtgtgtgtatatgtatttgatatgtttatggtgcatatgtatttggaatacatatgatgtgtgcatgtatatatacatatacacaccatatatataC---------------------------------CATTTTTTA----TGTGGCGAAAAATACTCTTTTTTGGTGTACAAAGTTTATTTTCTTTGCTAACAGTGTTAGTTTGT-ATAAAAAAGAATTcatttttactgaatatctatagacctttttggtcaacattccctaaaca---cagtataagaactatttacatagctttcacattgtattaggtattataagtaatctaaggatgatttaaaatatacaaggggatgtgcataggttatatgcaaatactgtgccattttatatcagggtcttgagtatccatagattttgatattagcaggaggtcctggaacaaattgcacatggatacagagggacA--------TCTATCTTTGATATTG-----Ttatatcatattatttatattatatatttatatattggtaata i colAng1.NW_012116221v1 I 8 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17501860 537 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=490661.000000 s hg38.chr4_KI270789v1_alt 100572 74 + 205944 tttatatattaGTTTAAAGGATTGTTATAAAAGTGGATTTTAAACCACAACAGCAACCAAAATGATTATGTGAT s panTro5.chr4 192892203 74 + 194502333 tttatatattaGTTTAAAGGAGTGTTATAAAAGTGGATTTTAAACCACAACAGCAACCAAAATGATTATGTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776022 74 + 195804263 tttatatattaGTTTAAAGGATTGTTATAAAAGTGGATTTTAAACCACAACAGCAACCAAAATGATTATGTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812468 74 + 4876863 tttatatatTAGTTTAAAGGATTGTTATAAAAGTGGATTTTAAACCACAACAGCAACCAAAATGATTATGTGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112701985 74 + 115148730 tttatatatCAGTTTAAAGGATTGTTATAAAAGTTGATTTTAAACCACAACAGCAACCAAAATGATTATGTGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984110 74 + 190429646 tttatatattagtttaAAGGATGGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187926883 74 + 189454096 tttatatattagtttaAAGGATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314454 74 - 25927173 tttatatatTAGTTTAAAGGATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3347935 74 + 4669795 tttatatattagtttaAAGAATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306266 74 + 135778131 tttatatatTAGTTTAAAGGATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759086 74 - 2847728 tttatatatTAGTTTAAAGGATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 873967 74 + 2368649 tttatatatTAGTTTAAAGGATTGTTATAAAAGTTGGTTTTAAACCACAACAGCAACCAAAATGATGATGTGAT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17502397 73 - 93316391 TTTACATATTAGTTTAAAGGATTGTTATAAAAGTTGTTATTAAACCATAACAACAAGCAAAAT-ATTATGTGAT i micMur3.chr14 I 537 I 326 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=70961.000000 s hg38.chr4_KI270789v1_alt 100646 12 + 205944 GTTACAGAGGAA s panTro5.chr4 192892277 12 + 194502333 GTTACAGAGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776096 12 + 195804263 GTTACAGAGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812542 12 + 4876863 GTTACAGAGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702059 12 + 115148730 GTTACAGAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984184 12 + 190429646 GTCACAGAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187926957 12 + 189454096 GTCACAGAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314528 12 - 25927173 GTCACAGAGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348009 12 + 4669795 GTCACAGAGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306340 12 + 135778131 GTCACAGAGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759160 12 - 2847728 GTCACAGAGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874041 12 + 2368649 GTCACAGAGGAA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=253646.000000 s hg38.chr4_KI270789v1_alt 100658 309 + 205944 TATGGTTGCCATC-------tttttttttttttttttttttgagacagagactcgctctgtcgcccaggctggagtgcggtggcacagtctcggctcactgcaagccccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctaggactacaggcgcccgccaccacgcc-ggct--aattttttatatttttagtagagatggggttttaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccaccttggcatcccaaagtgctgggattacaggcgtgagccaccccgcc s panTro5.chr4 192892289 307 + 194502333 TATGGTTGCCATC----------ttttttttttttttttttgagacagagtctcgctctgttgcccaggttagagtgcaatggcgcgatctcggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcatcctcccaagtagctgggactacaggtgcccgccagcacgcctggct--aattttttatatttttagtagagatggggtttcaccatgttagccaagatggtctcgatctcctgacctcgtgatctgcccaccttggcctcccaaagtgctgggattacaggcgtgagccaccccacc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776108 307 + 195804263 TATGGTTGCCAtt----------ctttttttttttttttttgagacagagtctcgctctgttgcccaggttagagtgcaatggcgcgatctcggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcatcctcccaagtagctgggactacaggtgcccgccagcacgcctggct--aattttttatatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatctgcccaccttggcctcccaaagtgctgggattacaggcgtgagccaccccgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812554 317 + 4876863 TATGGTTGCCATCttttttttttttttttttttttttttttgagacagagtctcgctctgttgcccaggttagagtgcaatggcgcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcatcctcccacgtagctgggactacaggcgcccgccagcacgcctggct--aattttttatatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccaccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702071 307 + 115148730 TATGGTTGCCATC------------TTTTTTGTGTGTGTGTGTgacagagtcttgctctgtcgcccaggttggagtgcagtggcgcgatctcggctcactgcgagctccgcctcctgggttcacgccattctcctgcctcatcctcctgagtagctgggactacaggcgcccactaccatgcctggctaaaattttttgtatttttagtagagacggggtttcaccgtgttatccaggatggtctccatctcctgacctagtgatccgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccccacc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438713 16 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 874053 0 + 2368649 C e manLeu1.NW_012102221v1 2759172 0 - 2847728 C e chlSab2.chr7 134306352 0 + 135778131 C e cerAty1.NW_012001672v1 3348021 0 + 4669795 C e macNem1.NW_012013133v1 24314540 0 - 25927173 C e macFas5.chr5 187926969 0 + 189454096 C e rheMac8.chr5 188984196 0 + 190429646 C e otoGar3.GL873580 11225897 753 - 11315646 I a score=4663.000000 s hg38.chr4_KI270789v1_alt 100967 5 + 205944 cggcc s panTro5.chr4 192892596 5 + 194502333 cggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776415 5 + 195804263 cggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812871 5 + 4876863 cggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702378 5 + 115148730 cagcc i nomLeu3.chr7b C 0 C 0 s dasNov3.JH570353 1438729 5 - 2520184 CAGTG i dasNov3.JH570353 I 16 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 874053 0 + 2368649 C e manLeu1.NW_012102221v1 2759172 0 - 2847728 C e chlSab2.chr7 134306352 0 + 135778131 C e cerAty1.NW_012001672v1 3348021 0 + 4669795 C e macNem1.NW_012013133v1 24314540 0 - 25927173 C e macFas5.chr5 187926969 0 + 189454096 C e rheMac8.chr5 188984196 0 + 190429646 C e otoGar3.GL873580 11225897 753 - 11315646 I a score=54858.000000 s hg38.chr4_KI270789v1_alt 100972 8 + 205944 TATGGTTG s panTro5.chr4 192892601 8 + 194502333 TATGGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776420 8 + 195804263 TATGGTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812876 8 + 4876863 TATGGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702383 8 + 115148730 TATGGTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984196 8 + 190429646 TATGGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187926969 8 + 189454096 TATGGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314540 8 - 25927173 TATGGTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348021 8 + 4669795 TATGGTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306352 8 + 135778131 TATGGTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759172 8 - 2847728 TATGGTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874053 8 + 2368649 TATGGTTG i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1438734 8 - 2520184 TGTGGTTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86585954 128 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=269893.000000 s hg38.chr4_KI270789v1_alt 100980 43 + 205944 CTATCTTTAATAAATATTATGGACATAAGAGAGAGAGAGAGAA s panTro5.chr4 192892609 43 + 194502333 CTATCTTTAATAAATATTATGGACATAAGAGAAAGAGAGAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776428 43 + 195804263 CTATCTTTAATAAATATTATGGACATAAGAGAAAGAGAGAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812884 43 + 4876863 CTATCTTTAATAAATATTATGGACATAAGAGAAAGAGAGAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702391 43 + 115148730 CTATCTTTAATAAATATTATGGACATAAGAGAAAGAGAGAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984204 41 + 190429646 CTATCTTTAATAAATATTACAGACATGAGAG--AGAGAGAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187926977 41 + 189454096 CTATCTTTAATAAATATTACAGACATGAGAG--AGAGAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314548 41 - 25927173 CTATCTTTAATAAATATTACAGACATGAGAG--AGAGAGAGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348029 41 + 4669795 CTATCTTTAATAAATATTACAGACATGAGAG--AAAGAGAGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306360 41 + 135778131 CTATCTTTAATAAATATTACGGACATGAGAG--AAAGAGAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759180 41 - 2847728 CTATCTTTAATAAATATTACAGACATGAGAG--AAAGAGAGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874061 43 + 2368649 CTATCTTTAATAAATATTACGGATGTGAGAGAAAGAGAGAGAA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86586082 40 - 129401213 CTGTCTTTATAAAATATTATGGAGATGAGA---AGAGAGATAA i mm10.chr8 I 128 C 0 s dasNov3.JH570353 1438742 43 - 2520184 CTGTTTTTAATAAACAATATGGGAATGAAAGAAGGAGGGGGAA i dasNov3.JH570353 C 0 I 250 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=986290.000000 s hg38.chr4_KI270789v1_alt 101023 173 + 205944 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGTTCTTGTCTACATGTAATGCAACACGTGGAATCTTTATAATAGGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCTAGATGCTGGGCAGGGGAGGGTTAG s panTro5.chr4 192892652 172 + 194502333 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGTTCTTGTCTACATGTAAT-CAACATGTGGAATCTTTATAATAGGTGTCAAGAAATTTTCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCTAGATGCTGGGCAGGGGAGGGTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776471 172 + 195804263 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGTTCTTGTCTACATGTAAT-CAACATGTGGAATCTTTATAATAGGTGTCAAGAAATTTTCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCTAGATGCTGGGCAGGGGAGGGTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3812927 172 + 4876863 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGTTCTTGTCTACATGTAAT-CAACACGTGGAATCTTTATAATAGGTGTCAATAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCTAGACGCTGGGCAGGGGAGGGTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702434 173 + 115148730 TGCTGCTAGGTCACTTAAAAATGGAGATGTGATGTTATGGGAATGTTCTTCTCTACATGTAAT-CAACACATAGAATCTTTATAATAAGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCTAGATGCTGGGCAGGGGAGGGTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984245 172 + 190429646 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGGTCTTGTCCATATGTAAT-CAACACATGGAATCTTTATAATATGTGTCCAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAACATGCTGGGCAGGGGAGGGTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927018 172 + 189454096 TGCTGCTAGGTCACTTAAAAATGGAGATGTGAT-TTATGGGAATGGTCTTGTCCATATGTAAT-CACCACATGGAATCTTTATAATATGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAACATGCTGGGCAGGGGAGGGTTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314589 167 - 25927173 TGCTGCTAGGTCACTTAAAAATAGAGATGTGAT-TTATGGGAATGGTCTTGTCCATATGTAAT-CAACACATGGAATCTT-----TATGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAACATGCTGGGCAGGGGAGGGTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348070 172 + 4669795 TGCTGCTAGGTCACTTAAAAATGGAGACGTGAT-TTATGGGAATGGTCTTGTCCATATGTAAT-CAACACATGGAATCTTTATAATATGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAGCATGCTGGGCAGGGGAGGGTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306401 167 + 135778131 TGCTGCTAGGTCACTTAAAAATGGAGACGTGAT-TTATGGGAATGGTCTTGTCCATATGTAAT-CAACACATGGAATCTT-----TATGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAACATGCTGGGCAGGGGAGGGTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759221 172 - 2847728 TGCTGCTAGGTCACTTAAAAATGGAGACGTGAT-TTATGGGAATGGTCTTGCCCATGTGTAAT-CAACACATGGAATCTTTATAATATGTGTCAAGAAATTTCCCATTCAGGAGAATTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCAACATGCTGGGCAGGGGAGGGTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874104 172 + 2368649 TGCTGCTAGGTCACTTAAAAATGGAGACATGAT-TTATGGGAATGTTCTTGTCCATATGTAAT-CAACACATGGAATCTTTATAATATGTGTCAAGAAATTTCCCATTCAGGAGACTTCTGTAGGTGAAGGTTCAGAGGGAGCCATGGCGACATGCTGGGCAGGGGAGGGTTAG i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86586122 143 - 129401213 ------TAAATTTTGTTGGAGAAGAGAAGGGAT---------ATATTCCTGGCTATGAGTTAC--------------GTTAAAGAAAATTGGCTATGAA--TCCAGTTAAAGAAAAGTTTGTGGACAAAGGTTCAGAGTTGTTTATGACCATACATCAGGCAGGCAAAGGTCAG i mm10.chr8 C 0 I 414 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=112240.000000 s hg38.chr4_KI270789v1_alt 101196 21 + 205944 ATGCAGCCTCACTGGAGGGGT s panTro5.chr4 192892824 21 + 194502333 ATGCAGCCTCACTGGAGGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776643 21 + 195804263 ATGCAGCCTCACTGGAGGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813099 21 + 4876863 ATGCAGCCTCACTGGAGGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702607 21 + 115148730 ATGCAGCCTCACTGGAGGGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984417 21 + 190429646 ACGCACCCTCACTGGAGGGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927190 21 + 189454096 ACGCACCCTCACTGGAGGGAT i macFas5.chr5 C 0 I 245 s macNem1.NW_012013133v1 24314756 21 - 25927173 ACGCACCCTCACTGGAGGGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348242 21 + 4669795 ACGCACCCTCACTGGAGGGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306568 21 + 135778131 ACATACCCTCACTGGAGGGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759393 21 - 2847728 ACGCACCCTCACTGGAGGGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874276 21 + 2368649 ACACATCCTCACTGGAGGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=90749.000000 s hg38.chr4_KI270789v1_alt 101217 18 + 205944 CGTTTTCTGGAAGTGATA s panTro5.chr4 192892845 18 + 194502333 CGTGTTCTGAAAGTGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776664 18 + 195804263 CGTGTTCTGAAAGTGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813120 18 + 4876863 CGTGTTCTGGAAGTGATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702628 18 + 115148730 CGTGTTCTGGAATCGATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984438 18 + 190429646 CCTGTTCTGGAAGTGATA i rheMac8.chr5 C 0 I 185 s macFas5.chr5 187927456 18 + 189454096 CATTATCCGGAAGTGATA i macFas5.chr5 I 245 C 0 s macNem1.NW_012013133v1 24314777 18 - 25927173 CCTGTTCTGGAAGTGATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348263 18 + 4669795 CGTGTTCTGGAAGGGATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306589 18 + 135778131 CGTGTTCTGGAAGTGATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759414 18 - 2847728 CGTGTTCTGGAAGTGATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874297 18 + 2368649 CGTGTTCTGGAAGTGATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=60610.000000 s hg38.chr4_KI270789v1_alt 101235 11 + 205944 TCTAACAT-CCC s panTro5.chr4 192892863 11 + 194502333 TCTAACAT-CCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776682 11 + 195804263 TCTAACAT-CCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813138 11 + 4876863 TCTAACAT-CCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702646 11 + 115148730 TCTAACAT-CCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984641 11 + 190429646 TCTAACAT-CCC i rheMac8.chr5 I 185 I 64 s macFas5.chr5 187927474 12 + 189454096 TCTAACATCCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314795 11 - 25927173 GCTAACAT-CCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348281 11 + 4669795 TCTAACAT-CCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306607 11 + 135778131 TCTAACAT-CCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759432 11 - 2847728 TCTAACAT-CCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874315 11 + 2368649 TCTAACAT-CCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=9520.000000 s hg38.chr4_KI270789v1_alt 101246 3 + 205944 TCC s panTro5.chr4 192892874 3 + 194502333 TCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776693 3 + 195804263 TCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813149 3 + 4876863 TCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702657 3 + 115148730 CCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187927486 2 + 189454096 -CC i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24314806 2 - 25927173 -CC i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3348292 3 + 4669795 GCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306618 3 + 135778131 GCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759443 2 - 2847728 -CC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874326 2 + 2368649 -CC i colAng1.NW_012116221v1 C 0 I 1 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e rheMac8.chr5 188984652 64 + 190429646 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=120472.000000 s hg38.chr4_KI270789v1_alt 101249 21 + 205944 ATTATCTGGAAGTGATATCTA s panTro5.chr4 192892877 21 + 194502333 ATTATCTGGAAGTGATATCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776696 21 + 195804263 ATTATCTGGAAGTGATATCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813152 21 + 4876863 ATTATCTGGAAGTGACATCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702660 21 + 115148730 ATTATCTGGAATTGATATCTA i nomLeu3.chr7b C 0 I 32 s rheMac8.chr5 188984716 21 + 190429646 ATTATCTGGAAGTGATATCTA i rheMac8.chr5 I 64 C 0 s macFas5.chr5 187927489 21 + 189454096 ATTACCTGGAAGTGATATCTA i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24314809 21 - 25927173 ATTATCCGGAAGTGATATCTA i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3348295 21 + 4669795 ATTATCCGGAAGTGATATCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306621 21 + 135778131 ATTATCCGGAAGTGATATCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759445 21 - 2847728 ATTATCCGGAAGTGATATCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874329 21 + 2368649 ATTATCCGGAAGTGATATCTA i colAng1.NW_012116221v1 I 1 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=32995.000000 s hg38.chr4_KI270789v1_alt 101270 8 + 205944 AAATCCCC s panTro5.chr4 192892898 8 + 194502333 AAATCCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776717 8 + 195804263 AAATCCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813173 8 + 4876863 AAATCCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702713 8 + 115148730 ACATCCCC i nomLeu3.chr7b I 32 C 0 s rheMac8.chr5 188984737 8 + 190429646 ACATCCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927510 8 + 189454096 ACATCCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314830 6 - 25927173 ACAT--CC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348316 8 + 4669795 ACATCACC i cerAty1.NW_012001672v1 C 0 I 275 s chlSab2.chr7 134306642 8 + 135778131 ACATCCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759466 8 - 2847728 ACATCACC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874350 8 + 2368649 ACATCCCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=-4936.000000 s hg38.chr4_KI270789v1_alt 101278 1 + 205944 -A s panTro5.chr4 192892906 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776725 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813181 1 + 4876863 -A i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188984745 1 + 190429646 C- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927518 1 + 189454096 C- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314836 1 - 25927173 T- i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e colAng1.NW_012116221v1 874358 0 + 2368649 C e manLeu1.NW_012102221v1 2759474 0 - 2847728 C e chlSab2.chr7 134306650 0 + 135778131 C e cerAty1.NW_012001672v1 3348324 275 + 4669795 I e nomLeu3.chr7b 112702721 0 + 115148730 C e otoGar3.GL873580 11225897 753 - 11315646 I a score=122101.000000 s hg38.chr4_KI270789v1_alt 101279 23 + 205944 CCATTATCTGAAAGTGATATCTA s panTro5.chr4 192892907 23 + 194502333 CCATTATCTGAAAGTGATATCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776726 23 + 195804263 CCATTATCTGAAAGTGATATCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813182 23 + 4876863 CCATTATCTGAAAGTGATATCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702721 23 + 115148730 CCATTATCTGGAAGTCATATCTA i nomLeu3.chr7b C 0 T 63 s rheMac8.chr5 188984746 23 + 190429646 CCATTACCTGGAAGTGATATCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927519 23 + 189454096 CCATTACCTGGAAGTGATATCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314837 23 - 25927173 CCATTATCCGGAGGTGATATCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348599 23 + 4669795 CCATTATCTGGAAGTGAGGTCTA i cerAty1.NW_012001672v1 I 275 C 0 s chlSab2.chr7 134306650 23 + 135778131 CCATTATCCGGAAGTGATATCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759474 23 - 2847728 CCATTATCTGGAAGTGAGGCCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874358 23 + 2368649 CCATTATCTGGAAGTGATATCTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=104509.000000 s hg38.chr4_KI270789v1_alt 101302 23 + 205944 ACAT-CCACCCATTATCTGGAAGT s panTro5.chr4 192892930 23 + 194502333 ACAT-CCACCCATTATCTGGAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776749 23 + 195804263 ACAT-CCACCCATTATCTGGAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813205 23 + 4876863 ACAT-CCACCCATTATCTGGAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702681 23 + 115148730 ACAT-CCCCCCATTATCTGCAAGT i nomLeu3.chr7b T 63 C 0 s rheMac8.chr5 188984769 24 + 190429646 ACATCCCCCCCATTACCTGGAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927542 24 + 189454096 ACATCCCCCCCATTACCTGGAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24314860 23 - 25927173 ACAT-CACCCCATTATCCGGAAGT i macNem1.NW_012013133v1 C 0 I 485 s cerAty1.NW_012001672v1 3348622 22 + 4669795 ACAT--CCCCCATTATCTGGAAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306673 22 + 135778131 ACAT--CCTCCATTATCCGGAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759497 23 - 2847728 ACAT-CCCCCCATTATCCGGAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874381 22 + 2368649 ACAT--CCCCCATTATCCGGAAGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=747396.000000 s hg38.chr4_KI270789v1_alt 101325 167 + 205944 GAATATCTAACTTT-CCCCCATTATCTGGAAGTGATAGCTAACATC-CCCCCATTATCTGGAAGTGAATATCTAACTT-CCCCCCATTATCTGGAAGTGATAGCTAACAT-----------------------------CCCCCCATTATCTGGAAGTG-ATAT-------------------------------CTAACATCCCCCCATTATCTGGAAGTGATAGCTAAC s panTro5.chr4 192892953 166 + 194502333 GAATATCTAAC-TT-CCCCCATTATCTGGAAGTGATATCTAACATC-CCCCCATTATCTGGAAGTGAATATCTAACTT-CCCCCCATTATCTGGAAGTGATAGCTAACAT-----------------------------CCCCCCATTATCTGGAAGTG-ATAT-------------------------------CTAACATCCCCCCATTATCTGGAAGTGATATCTAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776772 165 + 195804263 GAATATCTAAC-TT-CCCCCATTATCTGGAAGTGATATCTAACATC-CCCCCATTATCTGGAAGTGAATATCTAACTT--CCCCCATTATCTGGAAGTGATAGCTAACAT-----------------------------CCCCCCATTATCTGGAAGTG-ATAT-------------------------------CTAACATCCCCCCATTATCTGGAAGTGATATCTAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813228 197 + 4876863 GAATATCTAAC-TT-CCCCCATTATCTGGAAGTGATAGCTAACATC-CCCCCATTATCTGGAAGTGAATATCTAACTT-CCCCCCATTATCTGGAAGTGATAGCTAACAT-----------------------------CCCCCCATTATCTGGAAGTG-ATATCTAACATCCCCCCATTATCTGGAAGTGATAGCTAACATCCCCCCATTATCTGGAAGTGATAGCTAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702704 168 + 115148730 GAATATCTAACATC-CCCCCATTATCTGGAAGTCATATCTAACATC-CTCCCATTATCTGGAAGTGAATATCTAACAT-CCCCCCATTATCTGGAAGTGATATCTAACAT-----------------------------CCCCCCATTATCTGGAAGTGAATAT-------------------------------CTAACATCCCCCCATTATCTGGAAGTGATATCTAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984793 162 + 190429646 -GATATCTAAC-AT-CCCCCATTATCCGGAAGTGATATCTAACATC-TCCCCATTATCCGGAAGTG-ATATCTAACGT--CCCCCATTATCCGGAAGTGATATCTAACAT-----------------------------TTCCCCATTATCTGGAAGTG-AGGT-------------------------------CTAACAT-CCCCCATTATCTGGAAGTGATATCTAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927566 162 + 189454096 -GATATCTAAC-AT-CCCCCATTATCCGGAAGTGATATCTAACATC-TCCCCATTATCCGGAAGTG-ATATCTAACGT--CCCCCATTATCCGGAAGTGATATCTAACAT-----------------------------TTCCCCATTATCTGGAAGTG-AGGT-------------------------------CTAACAT-CCCCCATTATCTGGAAGTGATATCTAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24315368 192 - 25927173 GGATATCTAAC-AT-TCCCCATTATCTGGAAGTGATATCTAACATC--CCCCATTATCTGCAAGTG-ATGTCTAACAT--CCCCCATTATCTGGAAGTGATATCTAACATCCCCCCTTTCCGGAGTGATATCTGACATCTTTCCCATTATCTGGAAGTG-ATAT-------------------------------CTAACATCCCCCCATTACCTGGAAGTGATATCTAAC i macNem1.NW_012013133v1 I 485 I 3692 s cerAty1.NW_012001672v1 3348644 164 + 4669795 -GAGGTCTAAC-AT-CCCCCATTATCCGGAAGTGATATCTAACATCCCCCCCATTACCTGGAAGTG-ATATCTAACAT--CCCCCATTATCCGGAAGTGATATCTAACAT-----------------------------CTCCCCATTATCTGGAAGGG-ATAT-------------------------------CTAACATTCCCCCATTATCTGGAAGTGATGTCTAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306695 162 + 135778131 -GATGCCTAAC-ATCACCCCATTATCCGGAAGTGATGCCTAACAT--CCCCCATTATCCGGAAGTG-ATGCCTAACAT--CCCCCATTATCCGGAAGTGATGCCTAACAT------------------------------CCCCCATTATCCGGAAGTG-ATGC-------------------------------CTAACATCCCCCCATTATCCGGAAGTGATGTCTAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759520 153 - 2847728 -GAT-----------CCCCCATTATCCGGAAGTGAGGTCTAACATC-CCCCCATTATCCGGAAGTG-AGGTCTAACAT-CCCCCCATTATGCAGAAGTGAGGTCTGACAT------------------------------CCCCCATTATCCGGAAGTG-AGGT-------------------------------CTAACAT-CCCCCATTATCTGGACGTGAGGTCTAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874403 164 + 2368649 -GATATCTAAC-AT-CCCCCATTATCCGGAAGAGATATCTAACATC-CCCCCATTATCCGGAAGTG-ATATCTAACACCCCCCCCATTATCTGGAAGTGATATCTAACAT------------------------------CCCCCATTATCCGGAAGTG-ATAT-------------------------------CTAACATCCCCCCATTATCCGGAAGTGATATCTAAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=360738.000000 s hg38.chr4_KI270789v1_alt 101492 89 + 205944 ATCCCCCCATTATCCAGAAGTGAATATCTAACATCCCCCCATTATCTGGAAGTG-TTATCTAACATCA-----------------------------CCCCATTATCTGGAAGTGATGG s panTro5.chr4 192893119 82 + 194502333 AT-CCCCCATTATCCGGAAGTGAG-ATCTAACAT-CCCCCATTATCCGGAAGTGAATATCTAACATC------------------------------CCCCATTATCCGGAAGTG---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192776937 81 + 195804263 AT-CCCCCATTATCCGGAAGTGAG-ATCTAACAT-CCCCCATTATCCGGAAGTGAATATCTAACAT-------------------------------CCCCATTATCCGGAAGTG---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813425 89 + 4876863 ATCCCCCCATTATCCAGAAGTGAATATCTAACATACCCCCATTATCTGGAAGTG-TTATCTAACATCA-----------------------------CCCCATTATTTGGAAGTGATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112702872 89 + 115148730 ATCCGCCCATTATCTGGAAGTGAATATCTAACATCCCCCCATTATCTGGAAGTG-ATATCTAACATCC-----------------------------CCCCATTATCTGGAAGTGATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188984955 88 + 190429646 ATCTCCCCATTATCCGGAAGTGAA-GTCTAACATCTCCCCATTATCTGGAAGTG-ATATCTAACATCT-----------------------------CCCCATTATCCCGAAGTGATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927728 88 + 189454096 ATCTCCCCATTATCCGGAAGTGAG-GTCTAACATCTCCCCATTATCTGGAAGTG-ATATCTAACATCT-----------------------------CCCCATTATCCCGAAGTGATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319252 87 - 25927173 ATCCCCCCATTATCCGGAAGTGAT-ATCTAACATC-CTCCATTATCCGGAGGTG-ATATCTAACATCA-----------------------------CCCCATTATCCGGAAGTGATGC i macNem1.NW_012013133v1 I 3692 I 182 s cerAty1.NW_012001672v1 3348808 88 + 4669795 ATCCCCCCATTATCCCGAAGTGAT-ATCCAACATCTCCCCATTATCTGGAAGTG-ATATCTAACATCG-----------------------------CCGCATTATCCGGAAGTGAGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306857 85 + 135778131 AT-CCCCCATTATCCGGAAGTGAG-GTCTAACAT-CCCCCATTATGCGGAAGTG-AGGTCTAACATC------------------------------CCCCATTATCCGGAAGTGATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759673 87 - 2847728 ATCCCCCCATTATCCGGAAGTGAG-GTCTAACATCCCCCCATTATGCAGAAGTG-AGGTCTAACATC------------------------------CCCCATTATCCGGAAGTGAGGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874567 116 + 2368649 AT-CCCCCATTATCCGGAAGTGAG-ATCTAACATCCCCCCATTATCCGGAAGAG-AGATCTAACATCTCCCCATTATCCGGAAGGGAATCTAACATCCCCCATTATCCGGAAGTGATAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=198037.000000 s hg38.chr4_KI270789v1_alt 101581 74 + 205944 CTAACAT-CTGCCCATTATCTGGAAGTG-ATATCTAACAT-CCCCCCATTATCCGGAAGTGATATCTAACAT-C---------------------------------------------------------------------------------------------CCCC-- s panTro5.chr4 192893201 44 + 194502333 ---------------TTATCT---------------ACAT--CCCCCATTATCCGGAAGTGATATCTAACAT-----------------------------------------------------------------------------------------------CCCC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777018 44 + 195804263 ---------------TTATCT---------------ACAT--CCCCCATTATCCGGAAGTGATATCTAACAT-----------------------------------------------------------------------------------------------CCCC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813514 167 + 4876863 CTAACAT-CTGCCCATTATCTGGAAGTG-ATATCTAACAT-CCCCCCATTATCTGGAAGTGATATCTAACAT-CCACCCATTATCTGGAAGTGACAGCTAACATCCCCCATTAACCAGAAGTGAATATCTAACATCCCCCATTATCTGGAAGTGTTATCTAACATCACCCC-- i gorGor5.CYUI01015356v1 C 0 I 150 s nomLeu3.chr7b 112702961 73 + 115148730 CTAACAT-CC-CCCATTATCTAGAAGTGAATATCTAACAT-CCCCCCATTATCTGGAAGTGATATCTAACAT-----------------------------------------------------------------------------------------------CCCC-- i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 188985043 75 + 190429646 CTAAGAT-TTCCCCATTATCTGGAAGTG-ATATCTAACAT-CTCCCCATTATCCGGAAGTGAGGTCTAACAT-----------------------------------------------------------------------------------------------CTCCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927816 75 + 189454096 CTAAGAT-TTCCCCATTATCTGGAAGTG-ATATCTAACAT-CTCCCCATTATCCGGAAGTGAGGTCTAACAT-----------------------------------------------------------------------------------------------CTCCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319521 109 - 25927173 CTAACAT-CCCCCCATTATCTGGAAGTG-ATATCTAACATCCCCCCCATTATCTGGAAGTGATATCTAACATCCCCCCCATTACCTGGAAGTGATATCTAACATC--------------------------------------------------------------CCCCCC i macNem1.NW_012013133v1 I 182 C 0 s cerAty1.NW_012001672v1 3348896 75 + 4669795 CTAACAT-CTCCCCATTATCTGGAAGTG-ATATCTAACGT-CCTCCCATTATCTGGAAGTGAGGTCTAACAT-----------------------------------------------------------------------------------------------CTCCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134306942 72 + 135778131 CTAACAT--CCCCCATTATCCGGAAGTG-AGGTCTAACAT--CCCCCATTATCCGGAAGTGAGGTCTAACAT------------------------------------------------------------------------------------------------CCCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759760 76 - 2847728 CTAACATCCCCCCCATTATCCGGAACTG-AGGTCTAACATCCCCCCCATTATCCGGAAGTGAGGTCTAACAT------------------------------------------------------------------------------------------------CCGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874683 75 + 2368649 CTAACAT-CTCTCCATTATCTGGAAGTG-AGATCTAACAT-CCCCCCATTATCCGGAAGAGATATCTAACAT-----------------------------------------------------------------------------------------------CCCCCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=403598.000000 s hg38.chr4_KI270789v1_alt 101655 94 + 205944 ATTATCTGGAAGTGTTATCTGACATC-C-CCCATTATCCGGAAGTGAATATCTAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGTTATCTAACATCCCCCCC s panTro5.chr4 192893245 93 + 194502333 ATTATCCGGAAGTGTTATCTGACATC-C-CCCATTATCCGGAAGTGAATATCTAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGTTATCTAACAT-CCCCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777062 93 + 195804263 ATTATCCGGAAGTGTTATCTGACATC-C-CCCATTATCCGGAAGTGAATATCTAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGTTATCTAACAT-CCCCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813831 90 + 4876863 ATTATCCGGAAGTGTTATCTGACATC-C-CCCATTATCCGGAAGTGAA----TAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGTTACCTAACATCCCCCCC i gorGor5.CYUI01015356v1 I 150 C 0 s nomLeu3.chr7b 112703036 89 + 115148730 ATTATCTGGAAGTGATATCTAACATC-C-CCCATTATCTAGAAGTGAA----TATCAT--CCCCCCA-------------------------------TTATCTGGAAGTGATATCTAACAT-CCCCCC i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 188985118 91 + 190429646 ATTATCTGGAAGTGATATCTAACATC-C-CCCATTATCCGGAAGTGAT-ATCTAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGATATCTAACAT-C-CCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927891 91 + 189454096 ATTATCTGGAAGTGATATCTAACATC-C-CCCATTATCCGGAAGTGAT-ATCTAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGATATCTAACAT-C-CCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319630 123 - 25927173 ATTATCTGGAAGTGATATCTAACATC-C-CCCATTATCCGGAAGTGAT-ATCTAACAT--CTCCCCATTATCCGGAAGTGCTAGCTAACATCCTCCCATTATCTGGAAGTGATATCTAACAT-CTCCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3348971 93 + 4669795 ATTATCTAGAAGTGATATCTAACATC-CTCCCATTACCTGGAAGTGAT-ATCCAACAT--CTCCCCA-------------------------------TTATCTGGAAGTGATATCCAACAT-CTCCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307014 94 + 135778131 ATTATCCGGAAGTGAGGTCTAACAT--C-CCCATTATCCGGAAGTGAT-ATCTAACATCCCCCCCCA-------------------------------TTATCTGGAAGTGATATCTAACATCCCCCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759836 86 - 2847728 ATTATCCGGAAGTGAGGTCTAACATC-C-CCCATTATCTGGAAGTGAG-GTGTAACAT--CTCCCCA-------------------------------TTATCTGGAAGGGATATCTAACAT------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874758 91 + 2368649 ATTATCCGGAAGAGATATCTAACATCTC-CCCATTATCCGGAAGGGAT-ATCTAACAT--C-CCCCA-------------------------------TTATCCGGAAGTGACATCGAACAT-C-CCCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586265 414 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=163375.000000 s hg38.chr4_KI270789v1_alt 101749 36 + 205944 ATTATCTGG-AGTGATATCTAACATCCC-CCCATTATC s panTro5.chr4 192893338 36 + 194502333 ATTATCTGG-AGTGATATCTAACATCCC-CCCATTATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777155 37 + 195804263 ATTATCTGG-AGTGATATCTAACATCCCTCCCATTATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813921 36 + 4876863 ATTATCTGG-AGTGATATCTAACATCCC-CCCATTATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703125 36 + 115148730 ATTATCTGGAAGTGATATCTAACATCC--CCCATTATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985209 37 + 190429646 ATTATCCGGAAGTGATATCTAACATCTC-CCCATTATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187927982 37 + 189454096 ATTATCCGGAAGTGATATCTAACATCTC-CCCATTATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319753 37 - 25927173 ATTATCCGGAAGTGATATCTAACATCTC-CCCATTATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349064 37 + 4669795 ATTATCTGGAAGTGATATCTAACATCTC-CCCATTATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307108 36 + 135778131 ATTACCTGGAAGTGATATCTAGCATC-C-CCCATTATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759922 12 - 2847728 ------------------------TC-C-CCCATTATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874849 37 + 2368649 ATTATCCGGAAGTGATAGCTAACATCTC-TCCATTATC i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86586679 36 - 129401213 ATCTTTTGA-AGTGATCTCTAAAACCCC-CCCAATATC i mm10.chr8 I 414 I 921 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=83321.000000 s hg38.chr4_KI270789v1_alt 101785 23 + 205944 T-------------------------------GGAAGTGATATCTAACATCCCC s panTro5.chr4 192893374 22 + 194502333 T-------------------------------GGAAGTGATAGCTAACAT-CCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777192 23 + 195804263 T-------------------------------GGAAGTGATAGCTAACACTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813957 23 + 4876863 T-------------------------------GGAAGTGATATCTAACATCCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703161 22 + 115148730 T-------------------------------AGAAGTGATATCTAACAT-GCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985246 23 + 190429646 C-------------------------------GGAAGTGATATCTAACATCTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928019 23 + 189454096 C-------------------------------GGAAGTGATATCTAAGATTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319790 53 - 25927173 CTGAAGTGATATCTAACATTTCCCCATTATCTGGAAGTGAGGTCTAACA-TCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349101 23 + 4669795 C-------------------------------GGAAGTGAGGTCTAACATCTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307144 23 + 135778131 C-------------------------------GGAAGTGATATCTAACATCTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759934 23 - 2847728 T-------------------------------GGAAGTGATGTCTAACATCCCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 874886 23 + 2368649 T-------------------------------GGAAGTGATATCTAACATCCCC i colAng1.NW_012116221v1 C 0 I 649 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586715 921 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=509584.000000 s hg38.chr4_KI270789v1_alt 101808 106 + 205944 CCATTATCTGGAAGTGATAGCTAACA-TCCC-CCCATTATCTGGAAGTGATAGCTAACAT---CCCATTATCTGGAAGT-------------------------------GAATATCTAACAT--CCCCCA---------------------------TTATCTGGAAGTG s panTro5.chr4 192893396 110 + 194502333 CCATTATCTGGAAGTGATAGCTAACA-TCCC-CCCATTATCTGGAAGTGATAGCTAACATCCCCCCATTATCTGGAAGT-------------------------------GAATATCTAACAT-CCCCCCA---------------------------TTATCTGGAAGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777215 113 + 195804263 CCATTATCTGGAAGTGATAGCTAACACTCCC-CCCATTATCTGGAAGTGATAGCTAACACTCCCCCATTATCTGGAAGT-------------------------------GAATATCTAACACTCCCCCCAT--------------------------TTATCTGGAAGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3813980 110 + 4876863 CCATTATCTGGAAGTGATAGCTAACA-TCCC-CCCATTATCTGGAAGTGATAGCTAACATCCCCCCATTATCTGGAAGT-------------------------------GAATATCTAACAT-CCCCCCA---------------------------TTATCTGGAAGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703183 136 + 115148730 CCATTATCTGGAAGTGATATCTAACA-T-CC-CCCATTATCTAGAAGTGATATCTAACATCCGCCCATTATCTGGAAGT-------------------------------GAATATCTAACAT-CCCCCCATTATCTGGAAGTGATAACGTCCTCCCATTATCTGGAAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985269 108 + 190429646 CCATTATCTGGAAGTGATATCTAACA-TCC--CCCATTATCCGGAAGTGATATCTAACATTCCCCCATTATCTGGAAGT-------------------------------G-ATATCTAACAT-CTCCCCA---------------------------TTATCCGGAAGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928042 108 + 189454096 CCATTATCTGGAAGTGATATCTAACA-TCC--CCCATTATCCCGAAGTGATATCTAAGATTTCCCCATTATCTGGAAGT-------------------------------G-ATATCTAACAT-CTCCCCA---------------------------TTATCCGGAAGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319843 139 - 25927173 CCATTATCTGGAAGTGATATCTAACA-TCC--CCCATTATCTGGAAGTGATATCTAACATCTCCCCATTATCCGGAAGTGAGGTCTAACATCTCCCCATTATCTGGAAGGG-ATATCTAACAT-TCCCCCA---------------------------TTATCTGGAAGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349124 109 + 4669795 CCATTATCTGGAAGTGATGTCTAACG-TCCT-CCCATTATCTGGAAGTGATATCTAACATCTCCCCATTATCCCGAAGT-------------------------------G-ATATTTAACAT-CTCCCCA---------------------------TTATCTGGAAGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307167 109 + 135778131 CCATTATCCGGAAGTGATATCTAACA-TCCT-CCCATTATCTGGAAGTGATATCTAACATCTCCCCATTATCCCGAAGG-------------------------------G-ATGTCTAACAT-TCCCCCA---------------------------TTATCTGGAAGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759957 110 - 2847728 CCATTATCTGGAAGTGATATCTGACA-TCTTCCCCATTATCTGGAAGTGATATCTAACATCTCTCCATTATCTAGAAGT-------------------------------G-ATATCTAACAT-CTCCCCA---------------------------TTATCTGGAAGTG i manLeu1.NW_012102221v1 C 0 T 156 s colAng1.NW_012116221v1 875558 108 + 2368649 CCATTATCTGGAAGTGATATCTAACA-TCCC-CCCATTATCCGGAAGAGATATCTAACATCTCCCCATTATCCGGAAGG-------------------------------G-ATATCTAACAT--TCCCCA---------------------------TTATCCGGAAGTG i colAng1.NW_012116221v1 I 649 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586715 921 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=379953.000000 s hg38.chr4_KI270789v1_alt 101914 77 + 205944 TTATCTAACGTCACCCCATTATCTGGAAGTGATATCTAACATCCACCCATTATCTGGAAGTGATATCTAACATCCCC s panTro5.chr4 192893506 77 + 194502333 TTATCTAACATCACCCCATTATCTGGAAGTGATATCTAACATCCACCCATTATCTGGAAGTGATATCTAACATCCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777328 77 + 195804263 TTATCTAACATCACCCCATTATCTGGAAGTGATATCTAACATCCACCCATTATCTGGAAGTGATATCTAACATCCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814090 77 + 4876863 TTATCTAACATCACCCCATTATCTGGAAGTGATATCTAACATCCACCCATTATCTGGAAGTGATACCTAACATCCTC i gorGor5.CYUI01015356v1 C 0 I 315 s nomLeu3.chr7b 112703319 77 + 115148730 ATAGCTAACATCCCCCCATTATCTGGAAGTGATATCTAACTTCCCCCCATTATCTGGAAGTGATAGCTAACATCCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985377 77 + 190429646 AGGTCTAACATCTCCCCATTATCTGGAAGGGATATCTAACATTCCCCCATTATCTGGAAGTGATATCTAACATCTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928150 77 + 189454096 AGGTCTAACATCTCCCCATTATCTGGAAGGGATATCTAACATTCCCCCATTATCTGGAAGTGATATCTGACATCTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24319982 77 - 25927173 ATATCTAACATCTCCTCATTATCTGAAAGTGATATCTAACATCTCTCCATTATCTGGAAGTGATATCTAACATCCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349233 76 + 4669795 CTATCTAACATCTCCCCATTATCCGGAAGTGAGGTCTAACATCTCCCCATTATCTGGAAGGGATATCTAACAT-TCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307276 77 + 135778131 ATGTCTAACATCCCCCCATTATCTGGAAGTGATATCTAACATCCCCCCATTATCCAGAAGTGATATCTGACATCTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2759911 77 - 2847728 ATATCTAACATTCCCCCATTATCTGGAAGTGATGTCTAACATCCCCCCATTATCTGGAAGTGATATCTGACATCTTC i manLeu1.NW_012102221v1 T 156 C 0 s colAng1.NW_012116221v1 875666 75 + 2368649 ACATCTAACATC-CCCCATTATCCGGAAGTGATAGCTAACATCTCTCCATTATCTGGAAGTGATATCTAACAT-CTC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586715 921 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=230740.000000 s hg38.chr4_KI270789v1_alt 101991 48 + 205944 CCCATTATCTGGAAGT-GAT-------------------------------AGCTAACATCCCCCTATTATCTGGAACTG s panTro5.chr4 192893583 48 + 194502333 CCCATTATCTGGAAGT-GAT-------------------------------AGCTAACATCCCCCCATTATCTGGAACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777405 48 + 195804263 CCCATTATCTGGAAGT-GAT-------------------------------AGCTAACATCCCCCCATTATCTGGAACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814482 48 + 4876863 CCCATTATCTGGAAGT-GAT-------------------------------AGCTAACATCCCCCCATTATCTGGAAGTG i gorGor5.CYUI01015356v1 I 315 C 0 s nomLeu3.chr7b 112703396 47 + 115148730 -CCATTATCTGGAAGT-GAT-------------------------------ATCTAACTTCCGCCCATTATCTGGAAGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985454 48 + 190429646 CCCATTATCTGGAAGT-GAT-------------------------------ATCTAACATCCCCCCATTATCTGGAAGTG i rheMac8.chr5 C 0 I 63 s macFas5.chr5 187928227 48 + 189454096 CCCATTATCTGGAAGT-GAT-------------------------------ATCTAACATCCCCCCATTATCTGAAAGTG i macFas5.chr5 C 0 I 31 s macNem1.NW_012013133v1 24320059 47 - 25927173 CCCATTACCTGGAAGT-GAT-------------------------------ATCTAACAT-CCCCCATTATCCAGAAGTG i macNem1.NW_012013133v1 C 0 I 34 s cerAty1.NW_012001672v1 3349309 48 + 4669795 CCCATTATCTGGAAGT-GAT-------------------------------ATCTAACATCCCCCCATTATCCGGAAGTG i cerAty1.NW_012001672v1 C 0 I 64 s chlSab2.chr7 134307353 79 + 135778131 CCCATTATCTGGAAGT-GATAGCTAACATCCTCCCATTATCTGAAAGTGAGATCTAACATCTCTCCATTATCTGGAAGTG i chlSab2.chr7 C 0 I 64 s manLeu1.NW_012102221v1 2759988 48 - 2847728 CCCATTATCTGGAAGT-GAT-------------------------------ATCTAACATCTCTCCATTATCTAGAAGTG i manLeu1.NW_012102221v1 C 0 I 75 s colAng1.NW_012116221v1 875741 49 + 2368649 CACATTATCTGGAAGTGGGT-------------------------------ATCTAATTTCCCATCATTATCCGGAAGTG i colAng1.NW_012116221v1 C 0 I 1 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586715 921 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=2214593.000000 s hg38.chr4_KI270789v1_alt 102039 429 + 205944 ATAGCTaacatccc----------------------------------cc-------------------------------------------------------------cattatctggaagtgatatctaatt-tccaccattagtgacactcctccatgtttcaaggtatgtatttcaagaaagcccttgttagaataacagg-aatttattggggagaata------gcacA-ATG------TCttc----------ttttttttgagacagagtttcgctctgtcgcccaggctccggtgcaatggcgtgatcttggctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggcatgtgtcaccaaccctggctaattttgtatttttagtagagacgggggttctccatgttggtcaggctggtctcgaactcccaatctcaggtgatccgcctgcctcggccacc-caaagtgctgggattacaggcgtgagccaccgcgcccgg s panTro5.chr4 192893631 428 + 194502333 ATAGCTaacatccc----------------------------------cc-------------------------------------------------------------cattatctggaagtgatagttaact-tccaccattagtgacactcctccatgtttcaaggtatgtatttcaagaaagcccttgttagaagaacagg-aatttattggggagaata------gcaca-ATG------TCttc-----------tttttttgagacagagtttcactctgtcgcccaggctccagtgcaatggcgtgatcttggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccaaccccggctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccaatctcaggtgatccgcctgcctcggcctcc-caaagtgctgggattacaggcgtgagccaccgcgcctgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777453 428 + 195804263 ATAGCTaacatccc----------------------------------cc-------------------------------------------------------------cattatctggaagtgatagctaact-tccaccattagtgacactcctccatgtttcaaggtatgtatttcaagaaagcccttgttagaagaacagg-aatttattggggagaata------gcaca-ATG------TCttc-----------tttttttgagacagagtttcactctgtcgcccaggctccagtgcaatggcgtgatcttggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccaaccccggctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccaatctcaggtgatccgcctgcctcggcctcc-caaagtgctgggattacaggcgtgagccaccgcgcctgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814530 429 + 4876863 ATAGCTaacatccc----------------------------------cc-------------------------------------------------------------cattatctggaagtgatatctaact-tccaccattagtgacactcctccatgtttcaaggtatgtatttcaagaaagcccttgttagaataacagg-aatttattggggagaata------gcaca-ATG------TCttc----------ttttttttgagacagagtttcgctctgtcgcccaggctccggtgcaatggcgtgatcttggctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccagccccggctaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccaatctcaggtgatccgcctgcctcggcctcc-caaagtgctgggattacaggcatgagccaccgcgcccag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703443 439 + 115148730 ATAGCTAACTTCCC----------------------------------CC-------------------------------------------------------------CATTATCTGGAAGTGATAGCTAACT-TCCACCATTAGTGACACT-CTCTATGTTTCAAGTTATGTATTTCAAGAAAGCCCTTGTTAGAATAACAGGAAATTTACTGGGGAGAATG------GCACA-ATG------TCttc-tttttttttttttttttgagatagagtttcgctctgttgcccaggctggagtgcagtagtgtgatcttggctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcatcccgagtagctgggattacaggcatgtgtcaccaaccccggctaattctgtatttttagtagaaacagggtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatccgcctgcctcggcccccgcaaagtgctgagattacaggaatgagccaccgcacctgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188985565 481 + 190429646 GTATCTAATTTCCCATCATTATCCAGAAGTGGAT-----ATCTAACTTCC-------------------------------------------------------------CGTTATCTGAAAGTGATAACTaata-tccaccattagtgacacgcctctgtgtttcaagttatgtatttcaagaaagtccttgttaaaataacagg-gatttattagggagAATAGCAATAGCACA-ATGTCtttttttttttttttttttttttatttgagacagagtttcgccctgtcgcccaggctggggtgcaatggcatgatcttggctcactacaacctccgcttcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccacgcccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcgtctcgaactcctgacctcaggtgatctacctgccttggcccccgcaaagtgctgagattacaggcatgagccaccgtgcccgg i rheMac8.chr5 I 63 C 0 s macFas5.chr5 187928306 509 + 189454096 ATATCTAACATCTC----------------------------------CCCATTATCTGGAAGTGGGTATCTAATTTCCCATCATTATCCAGAAGTGGATATCTAACTTCCCGTTATCTGGAAGTGATAACTAATA-TCCACCATTAGTGACACGCCTCTGTGTTTCAAGTTATGTATTTCAAGAAAGTCCTTGTTAAAATAACAGG-GATTTATTAGGGAGAATAGCAATAGCACA-ATGTC----ttcttttttttttttttttatttgagacagagtttcgccctgtcgcccaggctggggtgcaatggcatgatcttggctcactacaacctccgcttcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccacgcccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcgtctcgaactcctgacctcaggtgatctacctgccttggcccccgcaaagtgctgagattacaggcatgagccaccgtgcccgg i macFas5.chr5 I 31 C 0 s macNem1.NW_012013133v1 24320140 469 - 25927173 GTATCTAATTTCCCATCATTATCCAGAAGTGGAT-----A-------TCTAACTTT-------------------------------------------------------CGTTATCTGGAAgtgataactaatattccaccattagtgacatgcctctgtgtttcaagttatgtatttcaagaaagtccttgttaaaataacagg-gatttattagggagAATAGCAATAGCACACATG----------tttttttttttttttatttgagacagagtttcg-cctgtcgcccaggctggggtg-aatggcatgatcttggctcactacaacctccgcttcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccacg-ctggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcgtctcgaactcctgacctcaggtgatctacctgccttggcccccgcaaagtgctgagattacaggcatgagccaccgtgcccgg i macNem1.NW_012013133v1 I 34 C 0 s cerAty1.NW_012001672v1 3349421 475 + 4669795 GTATCTAATTTCCCATCATTATCCAGAAGTGGATATCTAA-----CTTCC-------------------------------------------------------------CGTTATCTGGAAGTGATAACTaata-tccaccattagtgacacacctctgtgtttcaagttatgtatttcaagaaagtccttgttaaaataacagg-gatttattagggagAATAGCAATAGCACA-ATG------TCttcttttttttttttttatttgagacagagtttcgccttgtcgcccaggctggggtgcaatggcatgatcttggctcactacaacctccgcttcctgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccacgcccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcatctcgaactcctgacctcaggtgatctacctgccttggcccccgcaaagtgctgagattacaggcatgagccaccatgcccgg i cerAty1.NW_012001672v1 I 64 C 0 s chlSab2.chr7 134307496 443 + 135778131 ATATCTAACTT-------------------------------------CC-------------------------------------------------------------CGTTATCTGGAAGTGATAACCAATA-TCCACCATTAGTGACACGCTTCTGTGTTTCAAGTTATATATTTCAAGAAAGTCCTTGTTAAAATAACAGG-GATTTATTAGGGAGAATAGCAATAGCACA-ATG------TCttcttttttttttttttatttgagacagagtttcgccctgtcgcccaggctggggtgcaatggcatgatcttggctcactacaacctccgcttcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgctaccacgcccggctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcgtctcgaactcctgacctcaggtgatctacctgccttggctcccgcaaagtgctgagattacaggcatgagcccccgtgcccgg i chlSab2.chr7 I 64 C 0 s manLeu1.NW_012102221v1 2760111 431 - 2847728 ------------------------------------------------CC-------------------------------------------------------------CGTTATCTGGAAGTGATAACTaata-tccaccattagtgacacgcctctgtgtttcaagttatgtatttcaagaaagtccttgttaaaataacagg-gatttattagggagAATAGCAATTGCACA-ATG------TCttc-ttcttttttttttatttgagacagagtttcgccctgttgcccaggctggggtgcaatggcacgatcttggctcactacaacctctgcttcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgtcaccacacccagctaattttgtatttttagtagagacagggtttctccatgttggtcaggctcgtcttgaactcctgacctcaggtgatctacctgccttggctcccgcaaagtgctgagattacaggcatgagccaccgtgcccgg i manLeu1.NW_012102221v1 I 75 C 0 s colAng1.NW_012116221v1 875791 445 + 2368649 atatctaacttccc----------------------------------ac-------------------------------------------------------------cgttatctggaagtgataactaaca-tccaccattagtgacacgcctctgtgtttcaagttatgtatttcaagaaagtccttgttaaaataacagg-aatttattagggagaatagtaataGCACA-ATG------TCttc-tttttttttgtctgtttgagacagagtttcgccctgtcgcccaggctggggtgcaatggcatgatcttggctcactgcaacctccacttcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcatgtgtcaccacgcccggctacttttgtgtttttagtagagacagggtttctccatgttggtcaggctggtctcgaactccaaacctcaggtgatctacctaccttggcacccgcaaagtgctgagattacaggtatgagccaccgtgcccgg i colAng1.NW_012116221v1 I 1 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e mm10.chr8 86586715 921 - 129401213 I e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=7800.000000 s hg38.chr4_KI270789v1_alt 102468 1 + 205944 c s panTro5.chr4 192894059 1 + 194502333 c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777881 1 + 195804263 c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814959 1 + 4876863 c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703882 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986046 1 + 190429646 c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928815 1 + 189454096 c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320609 1 - 25927173 c i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349896 1 + 4669795 c i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307939 1 + 135778131 c i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760542 1 - 2847728 c i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876236 1 + 2368649 c i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86587636 1 - 129401213 C i mm10.chr8 I 921 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502470 326 - 93316391 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I e otoGar3.GL873580 11225897 753 - 11315646 I a score=61727.000000 s hg38.chr4_KI270789v1_alt 102469 7 + 205944 cACAATG s panTro5.chr4 192894060 7 + 194502333 cACAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777882 7 + 195804263 cACAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814960 7 + 4876863 cACAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703883 7 + 115148730 cACAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986047 7 + 190429646 cACAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928816 7 + 189454096 cACAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320610 7 - 25927173 cACAATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349897 7 + 4669795 cGCAATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307940 7 + 135778131 cACAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760543 7 - 2847728 cGCAATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876237 7 + 2368649 cACAATG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17502796 7 - 93316391 cacaata i micMur3.chr14 I 326 C 0 s otoGar3.GL873580 11226650 7 - 11315646 CACAATG i otoGar3.GL873580 I 753 C 0 s mm10.chr8 86587637 7 - 129401213 CACATTG i mm10.chr8 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e dasNov3.JH570353 1438785 250 - 2520184 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=791311.000000 s hg38.chr4_KI270789v1_alt 102476 105 + 205944 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAATAGTGCTGGGCAGATT-------GCAAGTGGGAGCAGT--GACATTGGGT-TTGAA---CAACAAACTT---aaaagaaaaga s panTro5.chr4 192894067 105 + 194502333 TCTTTATCAATCTACA-TGTAAGGAATTTTCTGGTAAAATAGTGCTGGGCAGATT-------GCAAGTGGGAGCAGT--GACACTGGGT-TTGAA---CAACAAACTT---aaaagaaaaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777889 105 + 195804263 TCTTTATCAATCTACA-TGTAAGGAATTTTCTGGTAAAATAGTGCTGGGCAGATT-------GCAAGTGGGAGCAGT--GACACTGGGT-TTGAA---CAACAAACTT---aaaagaaaaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3814967 100 + 4876863 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAATAGTGCTGGGCAGATT-------GCAAGTGGGAGCAGT--GACATTGGGT-TTGAA---AAACAAACTT--------AAAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703890 105 + 115148730 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAATAGTGCTAGGCAGATT-------GCAAGTGGGAGCAGT--GACATTGGGT-TTGAA---CAACCAACTT---aaaagaaaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986054 108 + 190429646 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTATTGAA---CAACAAACTT---Gaaagaaaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928823 108 + 189454096 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTATTGAA---CAACAAACTT---Gaaagaaaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320617 108 - 25927173 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTATTGAA---CAACAAACTT---Gaaagaaaaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3349904 111 + 4669795 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTGTTGAA---CAACAAACTTAAGGAAAGGAAACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134307947 108 + 135778131 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTGTTGAA---CAACAAACTT---gaaagaaaaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760550 108 - 2847728 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCTGTTCAACATTGGGTGTTGAA---CAACAAACTT---Gaaagaaaaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876244 106 + 2368649 TCTTTATCAATCTACA-CGTAAGGAATTTTCTGGTAAAACAGTGCTGGGCAGATT-------GCAAGTGGGAGCAGT--GACATTGGGTGTTGAA---CAACAAACTT---Gaaagaaaaga i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17502803 105 - 93316391 tctttatccatttaca-cataaggaattTTCATGTAACACAGTGCTGGGCAGATT-------GCAAGT-GGGGAAGA--GACATTGGGTCTTaaa---caacaaattc---gaaagaaaaga i micMur3.chr14 C 0 I 514 s otoGar3.GL873580 11226657 106 - 11315646 TCTTTATCAGTTTCCA-CGTGAGGAATGTTCAGATAAAACAGTGCTGGGTAGATT-------GCAAGTAGGAGCAGA--AGCACTGGGTCTTGAA---CAAGGAATTC---AAAAGAAAAGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86587644 106 - 129401213 TCCTTATTAACATATACCGAAATAAGTTTTCAGATAAAGCAGTG---GACTGATTAATAGAAAAAAACAGGGACTGT-------TATGTCTTAAA---TAGTAAACTT---AGAAGGAGAAA i mm10.chr8 C 0 I 6 s dasNov3.JH570353 1439035 102 - 2520184 TCCCTGTCAATGTACA-CACAGGCAA--TTCTGAGATGGCAGTGCCGGTCAGATG-------GCTACTAGAAGCAGC-------TAGGTCTTGAACTGCAGCACTCTG---CAAAGAAGAGA i dasNov3.JH570353 I 250 I 6 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=430995.000000 s hg38.chr4_KI270789v1_alt 102581 97 + 205944 aac----aaagaaaagaaCACATAATCTGTAGGCTGGGTTTCTGTCTGTC--------------------TGGTTTTGGGATGCAAAGAGAAGAAAAAATGA---------------GGT-------------------------AGTAGGCATTTAGTTA s panTro5.chr4 192894172 97 + 194502333 aac----aaagaaaagaaCACATAATCTGTAGGCTGGGTTTTTGTCTGTC--------------------TGGTTTTGGGATGCAAAGAGAAGAAAAAATGA---------------GGT-------------------------AGTAGGCATTTAGTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192777994 97 + 195804263 aac----aaagaaaagaaCACATAATCTGTAGGCTGGGTTTTTGTCTGTC--------------------TGGTTTTGGGATGCAAAGAGAAGAAAAAATGA---------------GGT-------------------------AGTAGGCATTTAGTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815067 97 + 4876863 AAC----AAAGAAAAGAACACATAATCTGTAGGCTGGGTTTTTGTCTGTC--------------------TGGTTTTGGGATGCAAAGAGAAGAAAAAATGA---------------GGT-------------------------AGTAGGCATTTAGTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112703995 94 + 115148730 aac----aaagaaaagaaCACATAAACTGTAGGCTGGGTTTTTGTTTTTT-----------------------TTTGGGGATGCAATGAGAAGAAAAAATGA---------------GGT-------------------------ACTAGGCAGTCAGTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986162 92 + 190429646 aac----aaagaaaagaaGACATAATCTGTAGGCTGCGTTTTTGTCTGT------------------------TTTTGGGATTCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCATTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187928931 92 + 189454096 aac----aaagaaaagaaGACATAATCCGTAGGCTGCGTTTTTGTCTGT------------------------TTTTGGGATTCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCATTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320725 92 - 25927173 aac----aaagaaaagaaGACATAATCCGTAGGCTGCGTTTTTGTCTGT------------------------TTTTGGGATTCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCATTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350015 92 + 4669795 AAG----AAAGAAAAGAAGACATAACCCGTAGGCTGCATTTTTGTCTGT------------------------TTTTGGGATTCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCATTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308055 96 + 135778131 aagaaagaaagaaaagaagaCATAATCCGTAGGCTGCATTTTTGTCTGT------------------------TTTTGGGATGCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCGTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760658 96 - 2847728 aacaaagaaagaaaagaaGACATAATCCGTAGGCTGCGTTTTTGTCTGT------------------------TTTTGGGATGCAATGGGAAG-AAAAATGA---------------GGT-------------------------CCGAGGCATTTCATTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876350 95 + 2368649 aacaaagaaagaaaagaaGACATAATCCGTAGGCTGGGTTTTTGTCTG-------------------------TTTTGGGATGCAATGGGAAG-AAAAATGA---------------GGT-------------------------CTGAGGCATTTCATTC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11226763 98 - 11315646 --------------------AACAATCTTTGGGTTGGGTTTTTGTTTATGAGAGGCACAGAAGTAAAGCATGGTGTTGG--TGTCATGGGAAGGACAAATGG--------------TGGT-------------------------ACTAGGCATTTAAA-- i otoGar3.GL873580 C 0 I 694 s mm10.chr8 86587756 120 - 129401213 AAG----AAAGAACTGAACATATCATCTCAAAGCTGGGTTTTTAATTCA---------------------CTATTCATGGATATGCAAAAAAG-TAAAATGC---------------TGTTGTTCTGAGGAAAAAGCTGGTAGCGAGTAGACATTCAATGG i mm10.chr8 I 6 C 0 s dasNov3.JH570353 1439143 110 - 2520184 AAC----AAAAAGGCAAACACACAACCTGGGGTCTGGGCCTGCTTTTGT---------------------TAGTTTTGAGAGGCACAGAAGAG-AATAAGGCTGTCGATGTAGTGGTGAT-------------------------AGCAGGCATTTCATTT i dasNov3.JH570353 I 6 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502908 514 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=272454.000000 s hg38.chr4_KI270789v1_alt 102678 42 + 205944 -TTTTCTAGCCTAAGATT--AAAGTGCTTTTTGCTCCTGCCTAAC s panTro5.chr4 192894269 42 + 194502333 -TTTTCTAGCCTAAGATT--AAAGTGCTTTTTGCTCCTGCCTAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778091 42 + 195804263 -TTTTCTAGCCTAAGATT--AAAGTGCTTTTTGCTCCTGCCTAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815164 42 + 4876863 -TTTTCTAGCCTAAGATT--AAAGTGCTTTTTGCTCCTGCCTAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704089 42 + 115148730 -TTTTCTAGCCTGAGATT--AAAGTGCTTTTTGCTCCTGCCTAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986254 41 + 190429646 -TTTTCTAGCCTAAGAGT---AAGTGCTTTTTCCTCCTGGCTAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929023 41 + 189454096 -TTTTCTAGCCTAAGAGT---AAGTGCTTTTTGATCCTGGCTAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320817 41 - 25927173 -TTTTCTAGCCTAAGAGT---AAGTGCTTTTTGCTCCTGGCTAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350107 41 + 4669795 -TTTTCTGGCCTAAGAGT---AAGTGCTTTTTGCTCCTGGCTAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308151 41 + 135778131 -TTTTCTAGCCTAAGAGT---AAGTGCTTTTTGCTCCTGGCTAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760754 41 - 2847728 -TTTTCTGGCCTAAGAGT---AAGTGCTTTTTGCTCCTGGCTAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876445 41 + 2368649 -TTTTCTAGCCTAAGATT---AAGTGCTTTTTGCTCCTGGCTAAC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11227555 43 - 11315646 -TTCTCTAGCCTAAGAATG-AAGATGATATTTGCTCCCAGCTAAC i otoGar3.GL873580 I 694 C 0 s mm10.chr8 86587876 44 - 129401213 -TTTTCTAACCCAAGGTTATAGAGTGATTCTTTCTACAGGAGAAA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439253 44 - 2520184 TTCCTTTAGCCTAAGAAT-AAGGGTAATTTTTGCCACTGACAGAC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17502908 514 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=372952.000000 s hg38.chr4_KI270789v1_alt 102720 58 + 205944 TTTAGGAAAG-TGAGGAAACAACATTCACAGACAAAGGACAATTGAGCATGAGCTCCAG s panTro5.chr4 192894311 58 + 194502333 TTTAGGAAAG-TGAGGAAACAACATTCACAGACAAAGGACAATTGAGCATGAGCTCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778133 57 + 195804263 TTTAGG-AAG-TGAGGAAACAACATTCACAGACAAAGGACAATTGAGCATGAGCTCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815206 58 + 4876863 TTTAGGAAAG-TGAGGAAACAACATTCACAGACAAAGGACAATTGAGCATGAGCTCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704131 58 + 115148730 TTTAGGAAAG-TGAGGAAACAACATTCACAGACAAAGGACAATTGAGCATGAGCTCCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986295 53 + 190429646 TTTAAGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929064 53 + 189454096 TTTAGGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320858 53 - 25927173 TTTAAGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350148 53 + 4669795 TTTAGGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308192 53 + 135778131 TTTAGGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760795 53 - 2847728 TTTAGGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCACCAGCTCCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876486 52 + 2368649 TTTAGGAAAG-TGAGG-----CCATTCACAGACAAAGGACAACTGAGCA-CAGCTCCAG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17503422 58 - 93316391 TTTAGGGAAA-TGAAGAAACAAAATTCACAGACAAAGGAGAGTGGAGCATGAGCTCCAG i micMur3.chr14 I 514 I 311 s otoGar3.GL873580 11227598 48 - 11315646 TTTAGGAAAAGTTAGGAAACAAAATTCACAGGTAAAGTAGAGCTGAAA----------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86587920 58 - 129401213 TTCAGGGAAA-TGAGCACACAGTATTCACGGAGTGTGGAGAATTGAACATGAGTTCTGA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439297 51 - 2520184 TTTATGGAAA-TGAGCAAATGAAATTCACAGACCA-------TCGAGCATGTATCCCAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=1603213.000000 s hg38.chr4_KI270789v1_alt 102778 276 + 205944 GGGACCATCAGCAAAACATTTTCAGAAGATGTGAAGAGTAGGATGCGTAAGTCATGGAGCAGATCAGAGGCCTGTGGATA-AGGTACCAAGGACAAGGAAGA--CTCTGTCGGTT-GAT-GATCTTGAGCAG---TGCTGCTAGGTCACTT-CAAAATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAATACGTATCTATATTTCTATGAATTAAAG-TTTTCCTATGGCCTATAGTTAAGTGTTCTTGCGAGGTG s panTro5.chr4 192894369 276 + 194502333 GGGACCATCAGCAAAACATTTTCAGAAGTTGTGAAGAGTAGGATGCGTAAGTCACGGAGCAGATCAGAGGCCTGTGGATA-AGGTACCAAGGACAAGGAAGA--CTCTGTCGGTT-GAT-GATCTTGAGCAG---TGCTGCTAGGTCACTT-CAAAATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAATACGTATCTATATTTCTACGAGTTAAAG-TTTTCCTATGGCCTGTAGTTAAGTGTTCTTGCGAGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778190 276 + 195804263 GGGACCATCAGCAAAACATTTTCAGAAGTTGTGAAGAGTAGGATGCGTAAGTCACGGAGCAGATCAGAGGCCTGTGGATA-AGGTACCAAGGACAAGGAAGA--CTCTGTCGGTT-GAT-GATCTTGAGCAG---TGCTGCTAGGTCACTT-CAAAATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAATACGTATCTATATTTCTACGAGTTAAAG-TTTTCCTATGGCCTGTAGTTAAGTGTTCTTGCGAGGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815264 276 + 4876863 GGGACCATCAGCAAAACATTTTCAGAAGTTGTGAAGAGTAGGATGCCTAAGTCATGGAGCAGATCAGAGGCCTGTGGATA-AGGTACCAAGGACAAGGAAGA--CTCTGTCGGTT-GAT-GATCTTGAGCAG---TGCTGCTAGGTCACTT-CAAAATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAATACGTATCTATATTTCTACGAATTAAAG-TTTTCCTATGGCCTATAGTTAAGTGTTCTTGCGAGGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704189 264 + 115148730 GGGACCATCAGGGAAACATTTTCAGAAGCTGTGAAGAGTAGGACGTGTAAGTCACACAGCAGAGCAGAGGCCTGTGGATA-AGGCACCAAGGACAAGGAAGA--CTCTGTCGGTT-GAT-GATCGTGAGCAG---TGCTGCTAGGTCACTT-CAAAACGGAGACGTGATGTATG--GGCATGTTATTGTCT-------------GCATGGAATCTTTATCATACGTGTCTATATTTCTACAAACTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTTCTTGCGAGGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986348 276 + 190429646 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGTCACGGAACAGAGCAGAGGCCTGCGGATC-AGGTACTGAGGACAAGGCAGA--CTCTGTCACTT-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCACTT-CAAGATGGAGACGTGATTTATG--GGCATGTTGTTGTCTACATGTAATCAACACATGGAATCTTTATAACACGTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGAGGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929117 276 + 189454096 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGTCACGGAACAGAGCAGAGGCCTGCGGATA-AGGTACTGAGGACAAGGCAGA--CTCTGTCACTC-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCACTT-CAAGATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAACACGTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGAGGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24320911 276 - 25927173 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGTCACGGAACAGAGCAGAGGCCTGCGGATA-AGGTACTGAGGACAAGGTAGA--CTCTGTCACTT-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCCCTT-CAAGATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAACACGTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGGGGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350201 276 + 4669795 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGTCACGGAACAGAGCAGAGGCCTGCGGATA-AGGTACTGAGGACAAGGTAGA--CTCTGTCACTC-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCACTT-CAAGATGGAGACGTGATTTATG--GGCATGTTATCGTCTACATGTAATCAACACATGGAATCTTTATAACACGTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGAGGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308245 276 + 135778131 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATATGC-AGTCAGGGAACAGAGCAGAGGCCTGCGGATA-AGGTACTGAGGACAAGGTAGA--CTCTGTCACTC-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCACTT-CAAGATGGAGACGTGATTTATG--GGCATGTTATTGTCTACATGTAATCAACACATGGAATCTTTATAACACTTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGAGGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2760848 276 - 2847728 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGGCACGGAACAGAGCAGAGGTCTGCGGATA-AGGTACTGAGGACAAGGTAGA--CTCTGTCACTC-GAG-GA---TGAGCAGTGCTGCTGCTAGGTCACTT-CAAGATGGAGACGTGATTTATG--GGCATGTTATCGTCTACATGTAATCAACACATGGAATCTTTATAACACGTGTCCACATTTCTACGAATTAAAGTTTTTCCTATGGCCTATAGTTAAGTGTGCTTGTGAGGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876538 273 + 2368649 GGGACCATCAGCAAAACCTTTTCAGAAGTTGTGAAGAGTAGGATACGC-AGTCACGGAACAGAGCAGAGGCCTGCGGATA-AGGTGCTGAGGACAAGGCAGA--CTCTGTCACTC-GAG-GA---TGAGCAG---TGCTGCTAGGTCACTT-CAAGATGGAGACATGATTTATG--GGCATGTTATTATCTACATGTAATCAACACATGGAGTCTTTATAACATGTGTCCACATTTCTACCAATTAAGGTTTTTCCTATGGCCTACAGTTAAGTGTGCTTGTGAGGTG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11227646 274 - 11315646 AAGACCTTCAGTGAAGCATTTTTGGAAGTCATGGAAAGTATAACCCTTAAGCCA-----CAGCACGGAAGCCTCTGGATA-GGGTA-TAAGGACAAGGAAGAATCTCTGTCACCTAAAT-GACTGTGAGAGA---TGGTGCCAGGTCACTT-AAAAATTGCCATTTGACTTATGCCAGCACGC--ATGTCCATGTGCAGTCAACAGATGCAGGCTTCACAGTGTGGGTCTGTATTTCTACTATAGGAAACTTTTCCAGTAGCCTGGCATGATGCGTGCTTGCAAGGTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86587978 250 - 129401213 TGGAACATATGCAAAACATTTTCTGAAGGCATAAAAGATAGATTGCTGAATTCACAGAACTGAACAGATTTTTTTTCACACAGGCCATAAGGA-----------TCC--TTACTT-AAG----------------TGGTACCACAT-ACTT-TAACACTAAAAACTGGTTTGTA--GATGTATACAGTTCCCTATTCAATCATTACTTATAA-CAATGTAATATGTGTGCATAGCTCCACAAATGA---TGTTTTTTATAACCTAGAATTTTTAATGTTCATACGCTG i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439348 248 - 2520184 AGGCCCATAAGCACAACCCTTCC-GAAGGAATGAAAAATAAAATGCTGGTGTCATGGAACAGG----------------A-GAGCACCAAGGATAAGG-ATC--CTCTGCCACTT-GATTGACCAAGAGCGA---TGCTGCCAGATGATTTATAAACTTGAGAATTGAC--ACG--AGAACGGTCATGTCCGTAGGTAACCCACCCTTGCGATGCTTATGGCA--TTTCCATTTTTCCACTAATTACAACTTTACCTCCTGCCTG---------GTGCCTGTACAATG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e proCoq1.NW_012145301v1 3924601 18417 + 3993831 I e micMur3.chr14 17503480 311 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=142785.000000 s hg38.chr4_KI270789v1_alt 103054 16 + 205944 TGTGAGCAGGTGCACC s panTro5.chr4 192894645 16 + 194502333 TGTGAGCAGGTGCACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778466 16 + 195804263 TGTGAGCAGGTGCACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815540 16 + 4876863 TGTGAGCAGGTGCACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704453 16 + 115148730 TGTGAGCAGGTGCACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986624 16 + 190429646 TGTGAGCAGGTGCACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929393 16 + 189454096 TGTGAGCAGGTGCACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321187 16 - 25927173 TGTGAGCAGGTGCACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350477 16 + 4669795 TGTGAGCAGGTGCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308521 16 + 135778131 TGTGAGCAGGTGCACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761124 16 - 2847728 TGTGAGCAGGTGCACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876811 16 + 2368649 TGTGAGCAGGTGCACA i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3943018 16 + 3993831 TGTGAGCAGGTGCGCA i proCoq1.NW_012145301v1 I 18417 C 0 s otoGar3.GL873580 11227920 16 - 11315646 TGTGAGCAGGTGCATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588228 16 - 129401213 TATGGGTTTATGCACA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439596 16 - 2520184 TAGGAGTATGTGTACA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605343 14 - 190850796 I e cebCap1.NW_016107886v1 989736 104 - 2196201 I e micMur3.chr14 17503480 311 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=8725.000000 s hg38.chr4_KI270789v1_alt 103070 1 + 205944 T s panTro5.chr4 192894661 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778482 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815556 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704469 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986640 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929409 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321203 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350493 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308537 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761140 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876827 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605357 1 - 190850796 T i calJac3.chr3 I 14 C 0 s proCoq1.NW_012145301v1 3943034 1 + 3993831 C i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11227936 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588244 1 - 129401213 T i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439612 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 989736 104 - 2196201 I e micMur3.chr14 17503480 311 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C e aotNan1.NW_018492112v1 3384324 15 - 5030052 I e saiBol1.JH378165 13094195 15 - 14256875 I a score=13365.000000 s hg38.chr4_KI270789v1_alt 103071 1 + 205944 A s panTro5.chr4 192894662 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778483 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815557 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704470 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986641 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929410 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321204 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350494 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308538 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761141 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876828 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605358 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094210 1 - 14256875 A i saiBol1.JH378165 I 15 C 0 s aotNan1.NW_018492112v1 3384339 1 - 5030052 A i aotNan1.NW_018492112v1 I 15 C 0 s proCoq1.NW_012145301v1 3943035 1 + 3993831 A i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11227937 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588245 1 - 129401213 A i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439613 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 989736 104 - 2196201 I e micMur3.chr14 17503480 311 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C a score=476737.000000 s hg38.chr4_KI270789v1_alt 103072 36 + 205944 TGCTGTACA-----TGGGGGAGGATGCTAGATAAAGAATAT s panTro5.chr4 192894663 36 + 194502333 TGCTGTACA-----TGGGGGAGGATGCTAGATAAAGAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778484 36 + 195804263 TGCTGTACA-----TGGGGGAGGATGCTAGATAAAGAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815558 36 + 4876863 TGCTGTACA-----TGGGGGAGGATGCTAGATAAAGAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704471 36 + 115148730 TGCTGCACA-----TGGGGGAAGATGCTAGATAAAGAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986642 36 + 190429646 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAAAATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929411 36 + 189454096 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAAAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321205 36 - 25927173 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAAAATAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350495 36 + 4669795 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAGAATAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308539 36 + 135778131 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAGAATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761142 36 - 2847728 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAGAATAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876829 36 + 2368649 TGCTGTACA-----TGGGGGAGGATGCTGGATAAAGAATAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605359 36 - 190850796 TGCTCTACA-----TGGGGGAGGATGCTACATAAAGAATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094211 36 - 14256875 TGCTGTACA-----TGGGGGAGGAAGTTCCATAAAGCATAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989840 36 - 2196201 TGCTGTACA-----CGGGGGAGGATGCTACATAAAGCATAT i cebCap1.NW_016107886v1 I 104 C 0 s aotNan1.NW_018492112v1 3384340 36 - 5030052 TGCTGTACA-----TGGGGGAGGATGCTACATAAAGAATAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943036 34 + 3993831 TGCTGTACG-----TGGGGGAGGACGCTAGAT--GGAATAT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11227938 36 - 11315646 TGCTGTACG-----TGGGGGAGGACGGTAGGTAAAGAATAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588246 37 - 129401213 TGTTCTATAC----TGGGAGATGATGCTCAATAAAGAATAT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1439614 31 - 2520184 ---------CATTGTGAGGGAAGATGCTAGATAAAGAG-AT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17503480 311 - 93316391 I e canFam3.chr16 16945710 0 - 59632846 C a score=110412.000000 s hg38.chr4_KI270789v1_alt 103108 16 + 205944 TATCTACTC-TGTCTTA s panTro5.chr4 192894699 16 + 194502333 TACCTACTC-TGTCTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778520 16 + 195804263 TACCTACTC-TGTCTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815594 16 + 4876863 TACCTACTC-TGTCTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704507 16 + 115148730 CGCCTACGC-TGTCTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986678 16 + 190429646 TGCCTACAC-CGTCTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929447 16 + 189454096 TGCCTACAC-CGTCTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321241 16 - 25927173 TGCTTACAC-CGTCTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350531 16 + 4669795 TGCCTACAC-AGTCTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308575 16 + 135778131 TGCCTACAC-CGTCTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761178 16 - 2847728 TGCCTACAC-CGTCTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876865 16 + 2368649 CGCCTACAC-CGTCTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605395 16 - 190850796 CTCCTACGC-CGTCTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094247 16 - 14256875 CTCCTACGC-CGTCTAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989876 16 - 2196201 CTCCTACGC-TGTCTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384376 16 - 5030052 CTCCTACGC-CGTCTAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943070 16 + 3993831 CGCCTGTGC-AGTCTAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11227974 17 - 11315646 TGCCCGTGCAAGTCTAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588283 8 - 129401213 TGCCTTTG--------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16945710 14 - 59632846 --TATATAC-TGTGTAT i canFam3.chr16 C 0 I 5 s dasNov3.JH570353 1439645 16 - 2520184 CGCCCAGGA-AGGGTAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17503480 311 - 93316391 I a score=2022889.000000 s hg38.chr4_KI270789v1_alt 103124 156 + 205944 CAGATCATTCCCAGACGGGGTGGTAGAAACAT--ACCATACGAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGGCCATAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG s panTro5.chr4 192894715 156 + 194502333 CAGATCATTCCCAGATGGGGTGGTAGAAACAT--ACCATACCAATGTAAGGAGTTTCCTAAAAATGTTCACTTGGGCCATAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778536 156 + 195804263 CAGATCATTCCCAGATGGGGTGGTAGAAACAT--ACCATACCAATGTAAGGAGTTTCCTAAAAATGTTCACTTGGGCCATAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815610 156 + 4876863 CAGATCATTCCCAGATGGGGTGGTAGAAACAT--ACCATACGAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGGCCATAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704523 156 + 115148730 CAGATCATTCCCAGGCGGGGTGGTAGAAACGT--ACCATACAAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGGCTGTAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCCACAAAGCACAGGTTGGTTGAGCATTATCTGCTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986694 147 + 190429646 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929463 147 + 189454096 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321257 147 - 25927173 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350547 147 + 4669795 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308591 147 + 135778131 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761194 147 - 2847728 CAGATCATTCCCAGATGCAGTGGTGGAAACAT--AACATA-GAATATAAGGAGGTTCCTAAAAATATTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGCTTAGCATTATCTGCTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 876881 149 + 2368649 CAGATCATTCCCAGATGCGGTAGTGGAAACATACAGCATA-GAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGG--------ACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605411 140 - 190850796 CAGATCATTCCCAGATGGGGTGGGAGAAACAT--ATCGTGCGAATGTAAGGAAGTTCCTAAAAATGTTCACTTGGC-CAAAAGCACCATACAATTGAGCAAGGTTGCACATTTATGAAGCTCTACAAAG---------------CATCTTCTGCTGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094263 152 - 14256875 CAGATCATTCCCAGATGGGGTGGGAGAAACAC--ACCATATGAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGC-CAAAAGCACCAGACAATTGAGCAAGGGTGCACTTTTATGAAG--CTACAAAGCACAGGTTGG-TTAACATTATCTGCTGCG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 989892 153 - 2196201 CAGATCATTCCCAGATGGGGCGGGAGAAACAC--ACCATACGAATGTGAGGAGGCTCCTAAAAATGTTCACTTGGC-CAAAAGCACCATACAGTTGAGCAAGGGTGCACATTTAGGAAG--CGACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384392 155 - 5030052 CAGATCATTCCCAGATGGAGTGGGAGAAACAT--ACCATACGAATGTAAGGAGGTTCCTAAAAATGTTCACTTGGC-CAAAAGCACCATAAAATTGAGCAAGATTGCACATTTACGAAGCTCTACAAAGCACAGGTTGGTTTAGCATTATCTGCTGAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17503791 156 - 93316391 CAGATCACTCCCAGGTGGGGTGGTAGCGGCAT--GCCAGATGAACGTAAGGAGGTTCCTAAAAATGTTCACTTGGTGCATATGTACAATCCCACTGAGTGAGGCTGCACATTTGTTAAGATATCCAAAGCACACATTGGTTTAGCATTATCTGTTGAG i micMur3.chr14 I 311 I 402 s proCoq1.NW_012145301v1 3943086 156 + 3993831 CAGATCATTCCCAGGTGGGGTGGCAGCAGCGT--GCCAGATGAACGTAAGGAGGTTCCTAAAAATGTTCACTTGGTGCATAAGTACAATCCCACTGAGTGAGGTTGTGCATTTGTTAAGATATCTGAAGCACAGATTGGTTTAGCATTATCTGTTGAG i proCoq1.NW_012145301v1 C 0 I 19 s otoGar3.GL873580 11227991 156 - 11315646 CAAATTGTTCCCAGGTGGGGTGGTAGTAATAT--ACCAGATGGACATAAGGAGGTTCCTAAAAATGTTCTCTCAGTGCATAACTAAAATCTATTGGCGTGAGGTTGCACATCTGTTAAGATACCCAAAGCACAGGTGGGCTTAGCCTTATTTGTTGAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588291 136 - 129401213 CAG----TTTCCAGACAGGGCAGTAGTAGTAT--CGCATATGAGTATAAGGAGT------------TTCACTGAAGTTGTAAGTACTATAAGGTTAAA-AAAGTTGCATATTCTTTGTGCTA---GAAGCATGGTTTGGTTTAGTGCTATCTGTTGTG i mm10.chr8 C 0 I 7 s canFam3.chr16 16945729 154 - 59632846 CAGATGAGTTCCAGGTAGGTTGGCAGCAATAT--ACCACATGAACATAAGGACTTTCCT-AATATGTTTACTTGAGCCATATGTACACTGCAATTTAAC-AGGTTGGACATTTACTAGGGTATATGTAGGGCAGAGTGGCTTAGCTTTATTTGCTGAA i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1439661 152 - 2520184 CTCATCCCTCCC-GTTGGGTTGGTGGGAACAT--GCCATGAGAACCTAAGGAGGTTCCC-AGCACGTTCAGTGGGACCATTAGTGTGTGGCAGTTGAAC-AGGCTGCACATTTATTAAGCTATG-GGAGCACACACGGCCTTCGCATTACTTGTTGAA i dasNov3.JH570353 C 0 C 0 a score=156752.000000 s hg38.chr4_KI270789v1_alt 103280 19 + 205944 CCATTGG-GCAATACCCCGT s panTro5.chr4 192894871 19 + 194502333 CCATTGG-GCAATACCCCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778692 19 + 195804263 CCATTGG-GCAATACCCCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815766 19 + 4876863 CCACTGG-GCAATACCCCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704679 19 + 115148730 CCATTGG-GCAATACTGCGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986841 19 + 190429646 CCATTGG-GCAATACCCTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929610 19 + 189454096 CCATTGG-GCAATACCCTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321404 19 - 25927173 CCATTAG-GCAATACCCTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350694 19 + 4669795 CCATTGG-GCAATACCCTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308738 19 + 135778131 CCATTGG-GCAATACCCTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761341 19 - 2847728 CCATTGG-GCAATACCCTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877030 19 + 2368649 CCATTGG-GCAATACCCTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605551 19 - 190850796 TCTTTGG-GCAATACCCTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094415 18 - 14256875 TCTTTGG-GCAATATCGCA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990045 19 - 2196201 TCTTTGG-GCAATACCCCAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384547 19 - 5030052 TCTTTGG-GCAAAACCCCAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228147 19 - 11315646 AGTTAGG-GCAAGATACAGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588434 16 - 129401213 ATAGTAG-ACAACACGT--- i mm10.chr8 I 7 I 1 s canFam3.chr16 16945883 18 - 59632846 -TACTGG-AGAAGGACATGG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1439813 19 - 2520184 -CATTAGAGCAAAACATGGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943242 19 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I a score=308275.000000 s hg38.chr4_KI270789v1_alt 103299 21 + 205944 GAGGGGCAC---AGAGAGATGGGA s panTro5.chr4 192894890 21 + 194502333 GAGGGGCAC---AGAGAGATGGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778711 21 + 195804263 GAGGGGCAC---AGAGAGATGGGA i panPan2.chr4 C 0 I 40 s gorGor5.CYUI01015356v1 3815785 21 + 4876863 GAGGGGCAC---AGAGAGATGGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704698 21 + 115148730 GAGGGGTAC---AGAGAGATGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986860 21 + 190429646 GAGGGGCAC---AGAGAGATGGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929629 21 + 189454096 GAGGGGCAC---AGAGAGATGGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321423 21 - 25927173 GAGGGGCAC---AGAGAGATGGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350713 21 + 4669795 GAGGGGCAC---AGAGAGATGGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308757 21 + 135778131 GAGGGGCAC---AGAGAGATGGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761360 21 - 2847728 GAGGGGCAC---AGAGAGATGGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877049 21 + 2368649 GAGGGGCAC---AGAGAGATGGGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605570 21 - 190850796 GAAGGGCAC---AGAGAGATGGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094433 21 - 14256875 GGAGGGCAC---AGACAGATGGCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990064 21 - 2196201 GAAGGGCAC---AGGCAGATGGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384566 21 - 5030052 GAAGGGCAC---AGAGAGATGAGA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943261 21 + 3993831 GAGGGACAC---AGAGAGGTGGTA i proCoq1.NW_012145301v1 I 19 C 0 s otoGar3.GL873580 11228166 21 - 11315646 GAGAGACAC---AGAGAGGTGATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588451 24 - 129401213 GAGGAATATGAAAGAGGGCAGGGA i mm10.chr8 I 1 C 0 s canFam3.chr16 16945902 21 - 59632846 GAGGGATGC---AGAGAGATGGTA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1439832 19 - 2520184 --GAGGTGC---AGAGGGCTTGGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17503947 402 - 93316391 I a score=370243.000000 s hg38.chr4_KI270789v1_alt 103320 39 + 205944 CAAGGCGCACAGAGGGCATCTGGGGAGTC----AGGAAACAGC s panTro5.chr4 192894911 39 + 194502333 CAAGGCACACAGAGGGCATCTGGGGAGTC----AGGAAACAGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815806 39 + 4876863 CAAGGCACACAGAGGGCATCTGGGGAGTC----AGGAAACAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704719 39 + 115148730 CGAGGCACACAGAGGGCATGTGGGGAGTC----AGGAAACAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986881 39 + 190429646 TGAGGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929650 39 + 189454096 TGAGGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321444 39 - 25927173 TGAGGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350734 39 + 4669795 TGAGGCACACAGAGGGCATCTGGGGAGGT----AGGCAACAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308778 39 + 135778131 TGAGGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761381 39 - 2847728 TGAAGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877070 39 + 2368649 CGAGGCACACAGAGGGCATCTGGGGAGGT----AGGAAACAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605591 39 - 190850796 GGAGGCACCCAAAGGGGATCTGGGGAGTC----AGGGACTCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094454 39 - 14256875 GGAGGCACACAGAGGGCATCTGGGGAGTC----GGGAAAGTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990085 39 - 2196201 GGAGGCACACAGAGGGCATCTGGGGAGTC----AGGGAACCAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384587 39 - 5030052 GGAGGCACACAGAGGGCATCTGGGGAGTC----AGAGAACCAC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943282 39 + 3993831 AGAGGCACACAGAGGGCACCTGGGGAGTC----GGGACACAGC i proCoq1.NW_012145301v1 C 0 I 276 s otoGar3.GL873580 11228187 33 - 11315646 AGAGGCATACAGA-GGCCCCTGGGGAGAC----AGGAC----- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86588475 43 - 129401213 AAAGATGATGGGAGCTTGTTATAGGAACTTAAAAGGAAACAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16945923 39 - 59632846 AGAGGTACACAAATGTCATTTGGAGGGCC----AGTAAGCAGT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1439851 11 - 2520184 -----------------------CAAGCC----AGGAA----- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17503947 402 - 93316391 I e panPan2.chr4 192778732 40 + 195804263 I a score=65246.000000 s hg38.chr4_KI270789v1_alt 103359 5 + 205944 ATGAG s panTro5.chr4 192894950 5 + 194502333 ATGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815845 5 + 4876863 ATGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704758 5 + 115148730 ATGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986920 5 + 190429646 ATGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929689 5 + 189454096 ATGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321483 5 - 25927173 ATGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350773 5 + 4669795 ATGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308817 5 + 135778131 ATGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761420 5 - 2847728 ATGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877109 5 + 2368649 ATGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605630 5 - 190850796 ATGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094493 5 - 14256875 ATGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990124 5 - 2196201 ATGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384626 5 - 5030052 ATGAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86588518 5 - 129401213 AGGAG i mm10.chr8 C 0 I 3714 s canFam3.chr16 16945963 5 - 59632846 ATGAG i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1439862 5 - 2520184 ATGTG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228220 0 - 11315646 C a score=213529.000000 s hg38.chr4_KI270789v1_alt 103364 31 + 205944 GACAG--GGGGCCCCTGG-----GAATAGAAGGAGACT s panTro5.chr4 192894955 31 + 194502333 GACAG--GGGGCCCCTGG-----GAATAGAAGGAGACT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815850 31 + 4876863 GACAG--GGGGCCCCTGG-----GAATAGAAGGAGACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704763 31 + 115148730 GACAG--GGACCCCCTGG-----GAATAGAAGGAGACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986925 33 + 190429646 GACAGGAGGGGCCCCTGC-----AAATAGAAGGAGACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929694 33 + 189454096 GACAGGAGGGGCCCCTGC-----AAATAGAAGGAGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321488 33 - 25927173 GACAGGAGGGGCCCCTGC-----AAATAGAAGGAGACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350778 33 + 4669795 GACAGGAGGGGCCCCTGC-----AAATAAAAGGAGACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308822 33 + 135778131 GACAGGAGGGGCCCCTGC-----AAATAGAAGGAGACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761425 33 - 2847728 GACAGGAGGGGCCCCTGC-----AAATAGAAGGAGACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877114 30 + 2368649 GAC---AGGGGCCCCTGC-----AAATAGAAGGAGACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605635 30 - 190850796 GATG---GGGGCCCCTGG-----GAATAGAAGGCGACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094498 29 - 14256875 GACG---GGGG-CCCTGG-----GAACAGAAGGTGACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990129 30 - 2196201 GACA---GGGGCCCCTGG-----GAACAGAAGGTGACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384631 30 - 5030052 GATG---GGAGTCTCTGG-----GAGTAGAAGGTGATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228220 10 - 11315646 -----------CTCCCAG-----GAA------------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16945968 36 - 59632846 --CAGAGTGGGTCCCTGGAGAAAAAAAAAAAGGAGACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1439867 33 - 2520184 GGTTG--TGGGTCCCTGGAG---GGATAAAGGGAGACT i dasNov3.JH570353 C 0 I 26 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e panPan2.chr4 192778732 40 + 195804263 I a score=285763.000000 s hg38.chr4_KI270789v1_alt 103395 34 + 205944 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACACAA---------- s panTro5.chr4 192894986 34 + 194502333 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACACAA---------- i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815881 34 + 4876863 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACACAA---------- i gorGor5.CYUI01015356v1 C 0 I 57 s nomLeu3.chr7b 112704794 34 + 115148730 TGTTCAAGGCAAG---------------------AAACTGAA--A-ATCAAAACACAA---------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986958 34 + 190429646 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929727 34 + 189454096 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321521 34 - 25927173 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350811 34 + 4669795 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308855 34 + 135778131 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761458 34 - 2847728 TGTTCAAGGGAAG---------------------AAACTGAA--A-AACAAAACCCAA---------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877144 34 + 2368649 TGTTCAAGGGAAG---------------------AAACTGAA--A-CACAAAACACAA---------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605665 34 - 190850796 TGTTCAAGGGAAG---------------------AAACTGAA--A-ATCAAAACACCA---------- i calJac3.chr3 C 0 I 10 s saiBol1.JH378165 13094527 34 - 14256875 TGTTCAAGGGGAG---------------------AAACTCAA--A-ATCAAAACCCCA---------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990159 34 - 2196201 TGTTCAAGGGAAG---------------------AAACTGAA--A-ATCAAAACACCA---------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384661 34 - 5030052 TGTTCAAGGGAAG---------------------AAACTGAA--A-ATCAAAACACCA---------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228230 26 - 11315646 -----GAAGGGGG---------------------AAACTAAA--ACAACAAAAA-------------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946004 67 - 59632846 TGTGAAAGACAGGGCACAcaaaccaaaccaaaccaaaccaaacta-aactaaaccCCACAAAAAACAA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e mm10.chr8 86588523 3714 - 129401213 I e panPan2.chr4 192778732 40 + 195804263 I a score=57431.000000 s hg38.chr4_KI270789v1_alt 103429 7 + 205944 GGGAGAT s panTro5.chr4 192895020 7 + 194502333 GGGAGAT i panTro5.chr4 C 0 T 7 s gorGor5.CYUI01015356v1 3815972 7 + 4876863 GGGAGAC i gorGor5.CYUI01015356v1 I 57 C 0 s nomLeu3.chr7b 112704828 7 + 115148730 GGGAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986992 7 + 190429646 GGAAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 7 + 189454096 GGAAGAT i macFas5.chr5 C 0 T 7 s macNem1.NW_012013133v1 24321555 7 - 25927173 GGAAGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350845 7 + 4669795 GGAAGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308889 7 + 135778131 GGAAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761492 7 - 2847728 GGAAGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877178 7 + 2368649 GGAAGAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 7 - 14256875 GGGAGAG i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 990193 7 - 2196201 GGGAGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384695 7 - 5030052 GGGAGAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228256 7 - 11315646 AGGAGAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946071 7 - 59632846 TGGAACT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189605699 10 - 190850796 I e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e mm10.chr8 86588523 3714 - 129401213 I e panPan2.chr4 192778732 40 + 195804263 I a score=13521.000000 s hg38.chr4_KI270789v1_alt 103436 3 + 205944 GAT s gorGor5.CYUI01015356v1 3815979 3 + 4876863 GAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704835 3 + 115148730 GAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188986999 3 + 190429646 GAG i rheMac8.chr5 C 0 I 28 s macNem1.NW_012013133v1 24321562 3 - 25927173 GAG i macNem1.NW_012013133v1 C 0 T 4115 s cerAty1.NW_012001672v1 3350852 3 + 4669795 GAG i cerAty1.NW_012001672v1 C 0 I 28 s chlSab2.chr7 134308896 3 + 135778131 GAG i chlSab2.chr7 C 0 I 28 s manLeu1.NW_012102221v1 2761499 3 - 2847728 GAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877185 3 + 2368649 GAG i colAng1.NW_012116221v1 C 0 I 28 s cebCap1.NW_016107886v1 990200 3 - 2196201 GAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384702 3 - 5030052 GAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228263 3 - 11315646 GAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946078 3 - 59632846 GAT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189605699 10 - 190850796 I e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e mm10.chr8 86588523 3714 - 129401213 I e saiBol1.JH378165 13094568 3 - 14256875 I e macFas5.chr5 187929768 7 + 189454096 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T a score=755.000000 s hg38.chr4_KI270789v1_alt 103439 1 + 205944 A s gorGor5.CYUI01015356v1 3815982 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704838 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s manLeu1.NW_012102221v1 2761502 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s aotNan1.NW_018492112v1 3384705 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16946081 1 - 59632846 A i canFam3.chr16 C 0 C 0 e calJac3.chr3 189605699 10 - 190850796 I e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e mm10.chr8 86588523 3714 - 129401213 I e saiBol1.JH378165 13094568 3 - 14256875 I e colAng1.NW_012116221v1 877188 28 + 2368649 I e chlSab2.chr7 134308899 28 + 135778131 I e cerAty1.NW_012001672v1 3350855 28 + 4669795 I e macNem1.NW_012013133v1 24321565 4115 - 25927173 T e macFas5.chr5 187929768 7 + 189454096 T e rheMac8.chr5 188987002 28 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=8843.000000 s hg38.chr4_KI270789v1_alt 103440 3 + 205944 GGG s gorGor5.CYUI01015356v1 3815983 3 + 4876863 GGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704839 3 + 115148730 GGG i nomLeu3.chr7b C 0 C 0 s macNem1.NW_012013133v1 24317450 3 - 25927173 AGG i macNem1.NW_012013133v1 T 4115 C 0 s manLeu1.NW_012102221v1 2761503 3 - 2847728 GGG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189605709 3 - 190850796 GGG i calJac3.chr3 I 10 C 0 s saiBol1.JH378165 13094571 3 - 14256875 GGG i saiBol1.JH378165 I 3 C 0 s aotNan1.NW_018492112v1 3384706 3 - 5030052 GGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16946082 2 - 59632846 -GG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e mm10.chr8 86588523 3714 - 129401213 I e colAng1.NW_012116221v1 877188 28 + 2368649 I e chlSab2.chr7 134308899 28 + 135778131 I e cerAty1.NW_012001672v1 3350855 28 + 4669795 I e macFas5.chr5 187929768 7 + 189454096 T e rheMac8.chr5 188987002 28 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=40292.000000 s hg38.chr4_KI270789v1_alt 103443 17 + 205944 AAAATCAGGGTCTCTGT s gorGor5.CYUI01015356v1 3815986 17 + 4876863 AAAATCAGGGTCTCTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704842 17 + 115148730 AAAATCAGGGTCTCTGT i nomLeu3.chr7b C 0 C 0 s macNem1.NW_012013133v1 24317453 17 - 25927173 GAAATCAGGGGCTCTGT i macNem1.NW_012013133v1 C 0 C 0 s manLeu1.NW_012102221v1 2761506 17 - 2847728 AAAATCAGGGGCTCTGT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189605712 17 - 190850796 GAAATCAGGGGCTCTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094574 17 - 14256875 GAAATCAGGGGCTCTGT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3384709 17 - 5030052 AAAATCAGGGGCTCTGT i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e colAng1.NW_012116221v1 877188 28 + 2368649 I e chlSab2.chr7 134308899 28 + 135778131 I e cerAty1.NW_012001672v1 3350855 28 + 4669795 I e macFas5.chr5 187929768 7 + 189454096 T e rheMac8.chr5 188987002 28 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=2781.000000 s hg38.chr4_KI270789v1_alt 103460 4 + 205944 GTAG s gorGor5.CYUI01015356v1 3816003 4 + 4876863 GTAG i gorGor5.CYUI01015356v1 C 0 C 0 s macNem1.NW_012013133v1 24317470 3 - 25927173 -TGA i macNem1.NW_012013133v1 C 0 I 1 s manLeu1.NW_012102221v1 2761523 3 - 2847728 -TGA i manLeu1.NW_012102221v1 C 0 I 1 s calJac3.chr3 189605729 4 - 190850796 TTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094591 4 - 14256875 TTAG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3384726 4 - 5030052 TTAG i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e colAng1.NW_012116221v1 877188 28 + 2368649 I e chlSab2.chr7 134308899 28 + 135778131 I e cerAty1.NW_012001672v1 3350855 28 + 4669795 I e macFas5.chr5 187929768 7 + 189454096 T e rheMac8.chr5 188987002 28 + 190429646 I e nomLeu3.chr7b 112704859 0 + 115148730 C e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=3395.000000 s hg38.chr4_KI270789v1_alt 103464 2 + 205944 TT s gorGor5.CYUI01015356v1 3816007 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 T 94 s nomLeu3.chr7b 112704859 1 + 115148730 -T i nomLeu3.chr7b C 0 I 1 s macNem1.NW_012013133v1 24317474 2 - 25927173 TT i macNem1.NW_012013133v1 I 1 C 0 s manLeu1.NW_012102221v1 2761527 2 - 2847728 TT i manLeu1.NW_012102221v1 I 1 I 1 s calJac3.chr3 189605733 2 - 190850796 TT i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13094595 2 - 14256875 TT i saiBol1.JH378165 C 0 I 1 s aotNan1.NW_018492112v1 3384730 2 - 5030052 TC i aotNan1.NW_018492112v1 C 0 I 1 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e colAng1.NW_012116221v1 877188 28 + 2368649 I e chlSab2.chr7 134308899 28 + 135778131 I e cerAty1.NW_012001672v1 3350855 28 + 4669795 I e macFas5.chr5 187929768 7 + 189454096 T e rheMac8.chr5 188987002 28 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=68652.000000 s hg38.chr4_KI270789v1_alt 103466 17 + 205944 ATCTGTGTGACTCAGCA s nomLeu3.chr7b 112704861 17 + 115148730 ATCTGTGTGACTCAGCA i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188987030 17 + 190429646 ATCTGTGTGACTCAGCA i rheMac8.chr5 I 28 C 0 s macNem1.NW_012013133v1 24317476 17 - 25927173 AATTGTGTGACTCAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350883 17 + 4669795 ATCTGTGTGACTCAGCA i cerAty1.NW_012001672v1 I 28 C 0 s manLeu1.NW_012102221v1 2761530 17 - 2847728 ATCTGTGTGACTCAGCA i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 877216 17 + 2368649 ATCCGTGTGACTCAGCA i colAng1.NW_012116221v1 I 28 C 0 s calJac3.chr3 189605736 17 - 190850796 ATCTGTGTGACTCAGCA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13094598 17 - 14256875 ATCTGTGTGACTCAGCA i saiBol1.JH378165 I 1 C 0 s aotNan1.NW_018492112v1 3384733 17 - 5030052 ATCTGTGTGACTCAGCA i aotNan1.NW_018492112v1 I 1 I 3 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e chlSab2.chr7 134308899 28 + 135778131 I e macFas5.chr5 187929768 7 + 189454096 T e gorGor5.CYUI01015356v1 3816009 94 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=3276.000000 s hg38.chr4_KI270789v1_alt 103483 1 + 205944 T s nomLeu3.chr7b 112704878 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987047 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24317493 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350900 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761547 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877233 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605753 1 - 190850796 T i calJac3.chr3 C 0 T 55 s saiBol1.JH378165 13094615 1 - 14256875 T i saiBol1.JH378165 C 0 T 55 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e chlSab2.chr7 134308899 28 + 135778131 I e macFas5.chr5 187929768 7 + 189454096 T e gorGor5.CYUI01015356v1 3816009 94 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=60.000000 s hg38.chr4_KI270789v1_alt 103484 1 + 205944 G s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24317494 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761548 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134308899 28 + 135778131 I e macFas5.chr5 187929768 7 + 189454096 T e gorGor5.CYUI01015356v1 3816009 94 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895027 7 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=100474.000000 s hg38.chr4_KI270789v1_alt 103485 38 + 205944 GGGAGACGATAGGG-AAAATCAGGGTCTCTGTGTAGTT-A s panTro5.chr4 192895020 38 + 194502333 GGGAGATGATAGGG-AAAATCAGGGTCTCTGTGTAGTT-A i panTro5.chr4 T 7 I 1 s gorGor5.CYUI01015356v1 3815915 38 + 4876863 GGGAGACGATAGGG-AAAATCAGGGTCTCTGTGTAGTT-A i gorGor5.CYUI01015356v1 T 94 I 1 s nomLeu3.chr7b 112704880 38 + 115148730 GGGCGACGACAGGG-AAAATCAGGGTCTCCGTTTAGTT-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987049 38 + 190429646 AGGAGATGACAGGG-AAAATCTGCGGCTCTGCTTAGTT-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 39 + 189454096 GGAAGATGAGAGGG-AAAATCAGGGGCTCTGTTGAGTTAA i macFas5.chr5 T 7 C 0 s macNem1.NW_012013133v1 24317495 37 - 25927173 AGGAGATGACAGGGAAAAATCAGCGGCTCTGT--AGTT-A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350902 38 + 4669795 AGGAGATGACAGGG-AAAATCAGGGGCTCTGCTTAGTT-A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308927 1 + 135778131 ---------------------------------------A i chlSab2.chr7 I 28 C 0 s manLeu1.NW_012102221v1 2761549 38 - 2847728 AGGCGATGACAGGG-AAAATCAGGGGCTCTGCTTAGTT-A i manLeu1.NW_012102221v1 C 0 T 56 s colAng1.NW_012116221v1 877235 38 + 2368649 AGGAGATGACAGGG-AAAATCAGGGGCTCTGCTTAGTT-A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=21010.000000 s hg38.chr4_KI270789v1_alt 103523 4 + 205944 TCTG s panTro5.chr4 192895059 4 + 194502333 TCTG i panTro5.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3815954 4 + 4876863 TCTG i gorGor5.CYUI01015356v1 I 1 C 0 s nomLeu3.chr7b 112704918 4 + 115148730 TCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987087 4 + 190429646 TCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929800 4 + 189454096 TCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24317532 4 - 25927173 TCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 4 + 4669795 TCTG i cerAty1.NW_012001672v1 C 0 T 56 s chlSab2.chr7 134308928 4 + 135778131 TCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761531 4 - 2847728 TCTG i manLeu1.NW_012102221v1 T 56 C 0 s colAng1.NW_012116221v1 877273 4 + 2368649 TCTG i colAng1.NW_012116221v1 C 0 T 56 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=67112.000000 s hg38.chr4_KI270789v1_alt 103527 14 + 205944 TGTGACTCAGCATG s panTro5.chr4 192895063 14 + 194502333 TGTGATTCAGCATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815958 14 + 4876863 TGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704922 14 + 115148730 TGTGACTCAGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987091 14 + 190429646 TGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929804 14 + 189454096 TGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24317536 14 - 25927173 TGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350888 14 + 4669795 TGTGACTCAGCATA i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308932 14 + 135778131 TGTGACTCAGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761535 14 - 2847728 TGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877221 14 + 2368649 TGTGACTCAGCATC i colAng1.NW_012116221v1 T 56 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=236577.000000 s hg38.chr4_KI270789v1_alt 103541 55 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895077 55 + 194502333 GGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815915 56 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704936 55 + 115148730 GGGAGATGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 56 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929818 55 + 189454096 AGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24317550 55 - 25927173 GGGAGATGACA-GGCAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350902 55 + 4669795 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308946 55 + 135778131 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761549 55 - 2847728 AGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877235 55 + 2368649 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2152.000000 s hg38.chr4_KI270789v1_alt 103596 1 + 205944 G s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 T 113 s macNem1.NW_012013133v1 24317605 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=24365.000000 s hg38.chr4_KI270789v1_alt 103597 4 + 205944 GGGA s panTro5.chr4 192895020 4 + 194502333 GGGA i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815972 4 + 4876863 GGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704992 4 + 115148730 GGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 4 + 190429646 GGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 4 + 189454096 GGAA i macFas5.chr5 T 113 C 0 s macNem1.NW_012013133v1 24317606 4 - 25927173 GGGA i macNem1.NW_012013133v1 C 0 I 3955 s cerAty1.NW_012001672v1 3350958 4 + 4669795 GGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 4 + 135778131 GGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 4 - 2847728 GGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 4 + 2368649 GGGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 4 - 14256875 GGGA i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=19573.000000 s hg38.chr4_KI270789v1_alt 103601 6 + 205944 GACGAT s panTro5.chr4 192895024 6 + 194502333 GATGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815976 6 + 4876863 GACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704996 6 + 115148730 GATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987166 6 + 190429646 GATGAC i rheMac8.chr5 C 0 T 170 s macFas5.chr5 187929765 6 + 189454096 GATGAG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350962 6 + 4669795 AATGAC i cerAty1.NW_012001672v1 C 0 T 113 s chlSab2.chr7 134309006 6 + 135778131 AATGAC i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761609 6 - 2847728 GATGAC i manLeu1.NW_012102221v1 C 0 T 113 s colAng1.NW_012116221v1 877295 6 + 2368649 GATGAC i colAng1.NW_012116221v1 C 0 T 113 s saiBol1.JH378165 13094565 6 - 14256875 GAGGAT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24317610 3955 - 25927173 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=248620.000000 s hg38.chr4_KI270789v1_alt 103607 46 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTCTGTGACTCAGCAT s panTro5.chr4 192895030 46 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 46 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705002 45 + 115148730 AGGGAAAATCAGGGTGTCTGTTTAGTT-ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 168 s rheMac8.chr5 188987002 46 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 T 170 C 0 s macFas5.chr5 187929771 46 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 46 - 25927173 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 I 3955 C 0 s cerAty1.NW_012001672v1 3350855 46 + 4669795 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 113 C 0 s chlSab2.chr7 134308899 46 + 135778131 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761502 46 - 2847728 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 113 C 0 s colAng1.NW_012116221v1 877188 46 + 2368649 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 113 C 0 s saiBol1.JH378165 13094571 45 - 14256875 -GGGGAAATCAGGGGCTCTGTTTAGTTGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=254981.000000 s hg38.chr4_KI270789v1_alt 103653 56 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 169 s nomLeu3.chr7b 112704879 56 + 115148730 AGGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAGTTATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 168 C 0 s rheMac8.chr5 188987048 56 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 56 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 56 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 56 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 56 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 56 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 56 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2300.000000 s hg38.chr4_KI270789v1_alt 103709 1 + 205944 G s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=288564.000000 s hg38.chr4_KI270789v1_alt 103710 56 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTCTGTGACTCAGCAT s panTro5.chr4 192895020 56 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 56 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704936 55 + 115148730 GGGAGATGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 56 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 56 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 56 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 56 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 56 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTATGCGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 56 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 56 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 55 - 14256875 GGGAGAGGATGGG-GAAATCAGGGGCTCTGTTTAGTTGATCTGTGTGACTCAGCAT i saiBol1.JH378165 T 55 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2104.000000 s hg38.chr4_KI270789v1_alt 103766 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=35783.000000 s hg38.chr4_KI270789v1_alt 103767 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704992 6 + 115148730 GGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309059 6 + 135778131 AGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761662 6 - 2847728 AGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 6 - 14256875 GGGAGA i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=73828.000000 s hg38.chr4_KI270789v1_alt 103773 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895026 18 + 194502333 TGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815921 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704998 18 + 115148730 TGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 18 + 189454096 TGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 184 s chlSab2.chr7 134309065 18 + 135778131 TGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 18 - 2847728 TGACAGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 184 s saiBol1.JH378165 13094567 17 - 14256875 -GGATGGGGAAATCAGGG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=26575.000000 s hg38.chr4_KI270789v1_alt 103791 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 12 + 115148730 TGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309083 12 + 135778131 GCTCTGCTTAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 12 - 2847728 GCTCTGCTTAGT i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=57147.000000 s hg38.chr4_KI270789v1_alt 103803 20 + 205944 TAATCTCTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 20 + 4876863 TAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987198 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929967 20 + 189454096 TAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309095 19 + 135778131 T-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761698 19 - 2847728 T-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=745.000000 s hg38.chr4_KI270789v1_alt 103823 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 1 + 189454096 A i macFas5.chr5 C 0 T 227 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=31401.000000 s hg38.chr4_KI270789v1_alt 103824 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 T 227 s macFas5.chr5 187929761 10 + 189454096 GGAAGATGAG i macFas5.chr5 T 227 C 0 s chlSab2.chr7 134309115 10 + 135778131 GGGAGATGAC i chlSab2.chr7 C 0 T 226 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 T 226 s calJac3.chr3 189605699 10 - 190850796 GGGAGACGAT i calJac3.chr3 T 55 C 0 s saiBol1.JH378165 13094561 10 - 14256875 GGGAGAGGAT i saiBol1.JH378165 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=163778.000000 s hg38.chr4_KI270789v1_alt 103834 26 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGT s panTro5.chr4 192895030 26 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 26 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 26 + 115148730 AGGGAAAATCAGGGTCTCCGTTTAGT i nomLeu3.chr7b C 0 T 57 s rheMac8.chr5 188987002 26 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGT i rheMac8.chr5 T 227 C 0 s macFas5.chr5 187929771 26 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 26 - 25927173 AGGGAAAATCAGGGGCTCTGTTGAGT i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3350855 26 + 4669795 AGGGAAAATCAGGGGCTCTGTTGAGT i cerAty1.NW_012001672v1 T 184 C 0 s chlSab2.chr7 134308899 26 + 135778131 AGGGAAAATCAGGGGCTCTGTTGAGT i chlSab2.chr7 T 226 C 0 s manLeu1.NW_012102221v1 2761502 26 - 2847728 AGGGAAAATCAGGGGCTCTGTTGAGT i manLeu1.NW_012102221v1 T 226 C 0 s colAng1.NW_012116221v1 877188 26 + 2368649 AGGGAAAATCAGGGGCTCTGTTGAGT i colAng1.NW_012116221v1 T 184 C 0 s calJac3.chr3 189605709 25 - 190850796 -GGGGAAATCAGGGGCTCTGTTTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094571 25 - 14256875 -GGGGAAATCAGGGGCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=139263.000000 s hg38.chr4_KI270789v1_alt 103860 20 + 205944 TAATCTGTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 20 + 4876863 TAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 57 C 0 s rheMac8.chr5 188987028 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929797 20 + 189454096 TAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 20 - 25927173 TAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350881 20 + 4669795 TAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308925 20 + 135778131 TAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761528 20 - 2847728 TAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877214 20 + 2368649 TAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605734 20 - 190850796 TCATCTGTGTGACTCAGCAT i calJac3.chr3 C 0 T 55 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=254981.000000 s hg38.chr4_KI270789v1_alt 103880 56 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704879 56 + 115148730 AGGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAGTTATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 56 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 56 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 56 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 56 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 56 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 56 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 56 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2997.000000 s hg38.chr4_KI270789v1_alt 103936 1 + 205944 G s gorGor5.CYUI01015356v1 3816028 1 + 4876863 A i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=243182.000000 s hg38.chr4_KI270789v1_alt 103937 55 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA-TCTGTGTGACTCAGCAT s panTro5.chr4 192895020 56 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3816029 55 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA-TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704936 55 + 115148730 GGGAGATGATAGGGAAAATCAGGGTCTCTGTTTAGTTA-TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 56 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 56 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 56 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 56 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 56 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTATGCGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 56 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 56 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=32461.000000 s hg38.chr4_KI270789v1_alt 103992 7 + 205944 GGGGAGA s panTro5.chr4 192895076 7 + 194502333 GGGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 7 + 4876863 AGGGAGA i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704991 7 + 115148730 AGGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 7 + 190429646 AGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 7 + 189454096 AGGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 7 - 25927173 AGGGAGA i macNem1.NW_012013133v1 C 0 T 57 s cerAty1.NW_012001672v1 3351014 7 + 4669795 AGGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 7 + 135778131 AAGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 7 - 2847728 AAGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 7 + 2368649 AGGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=201174.000000 s hg38.chr4_KI270789v1_alt 103999 49 + 205944 CGATAGGGAAAATCAGGG----TCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895083 49 + 194502333 CGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816035 49 + 4876863 CGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704998 49 + 115148730 TGATAGGGAAAATCAGGG----TGTCTGTTTAGTT-ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 112 s rheMac8.chr5 188987168 50 + 190429646 TGACAGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 50 + 189454096 TGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321674 50 - 25927173 TGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 57 C 0 s cerAty1.NW_012001672v1 3351021 53 + 4669795 TGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 T 92 s chlSab2.chr7 134309065 49 + 135778131 TGACAGGGAAAATCAACG----GCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 49 - 2847728 TGACAGGGAAAATCAGCG----GCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 53 + 2368649 TGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 T 92 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=22529.000000 s hg38.chr4_KI270789v1_alt 104048 7 + 205944 GGGGAGA s panTro5.chr4 192895076 7 + 194502333 GGGGAGA i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 7 + 4876863 AGGGAGA i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704935 7 + 115148730 AGGGAGA i nomLeu3.chr7b T 112 C 0 s rheMac8.chr5 188987218 7 + 190429646 AGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 7 + 189454096 AGGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 7 - 25927173 AGGGAGA i macNem1.NW_012013133v1 C 0 T 57 s chlSab2.chr7 134309114 7 + 135778131 AGGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 7 - 2847728 AGGGAGA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877407 92 + 2368649 T e cerAty1.NW_012001672v1 3351074 92 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=53891.000000 s hg38.chr4_KI270789v1_alt 104055 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895083 18 + 194502333 CGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816035 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704942 18 + 115148730 TGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987225 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187929994 18 + 189454096 TGACAGGGAAAATCAGGG i macFas5.chr5 C 0 I 4 s macNem1.NW_012013133v1 24321674 18 - 25927173 TGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 T 57 C 0 s chlSab2.chr7 134309121 18 + 135778131 TGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761724 18 - 2847728 TGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877407 92 + 2368649 T e cerAty1.NW_012001672v1 3351074 92 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=118758.000000 s hg38.chr4_KI270789v1_alt 104073 28 + 205944 TCTCTGTGTAGTT-ATCTGTGTGACTCAG s panTro5.chr4 192895101 28 + 194502333 TCTCTGTTTAGTT-ATCTGTGTGACTCAG i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816053 28 + 4876863 TCTCTGTTTAGTT-ATCTGTGTGACTCAG i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704960 28 + 115148730 TCTCTGTTTAGTT-ATCTGTGTGACTCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987129 29 + 190429646 GCTCTGTTGAGTTAATCTGTGTGACTCAG i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187930016 28 + 189454096 GCTCTGTTGAGTT-ATCAGTGTGACTCAG i macFas5.chr5 I 4 C 0 s macNem1.NW_012013133v1 24321692 29 - 25927173 GCTCTGTTGAGTTAATCTGTGTGACTCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 29 + 4669795 GCTCTGTTGAGTTAATCTGTGTGACTCAG i cerAty1.NW_012001672v1 T 92 C 0 s chlSab2.chr7 134309139 29 + 135778131 GCTCTGTTGAGTTAATCTGTGTGACTCAG i chlSab2.chr7 C 0 T 72 s manLeu1.NW_012102221v1 2761742 29 - 2847728 GCTCTGTTGAGTTAATCTGTGTGACTCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 29 + 2368649 GCTCTGTTGAGTTAATCTGTGTGACTCAG i colAng1.NW_012116221v1 T 92 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=10413.000000 s hg38.chr4_KI270789v1_alt 104101 3 + 205944 TAT s panTro5.chr4 192895073 3 + 194502333 CAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816025 3 + 4876863 CAC i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704988 3 + 115148730 CAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987158 3 + 190429646 CAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930044 3 + 189454096 CAT i macFas5.chr5 C 0 T 117 s macNem1.NW_012013133v1 24321721 3 - 25927173 CAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351011 3 + 4669795 CAT i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761771 3 - 2847728 CAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877344 3 + 2368649 CAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309168 72 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=28342.000000 s hg38.chr4_KI270789v1_alt 104104 7 + 205944 GGGGAGA s panTro5.chr4 192895076 7 + 194502333 GGGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 7 + 4876863 AGGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704991 7 + 115148730 AGGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 7 + 190429646 AGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 7 + 189454096 AGGGAGA i macFas5.chr5 T 117 C 0 s macNem1.NW_012013133v1 24321724 7 - 25927173 AGGGAGA i macNem1.NW_012013133v1 C 0 T 113 s cerAty1.NW_012001672v1 3351014 7 + 4669795 AGGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 7 - 2847728 AGGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 7 + 2368649 AGGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309168 72 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=67572.000000 s hg38.chr4_KI270789v1_alt 104111 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895083 18 + 194502333 CGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816035 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704998 18 + 115148730 TGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 18 + 189454096 TGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321618 18 - 25927173 TGACAGGGAAAATCAGCG i macNem1.NW_012013133v1 T 113 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 113 s manLeu1.NW_012102221v1 2761781 18 - 2847728 TGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 I 4 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309168 72 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=39387.000000 s hg38.chr4_KI270789v1_alt 104129 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 13 + 4876863 TCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 13 + 115148730 TGTCTGTTTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987186 13 + 190429646 GCTCTGTTGAGTT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187929955 13 + 189454096 GCTCTGTTGAGTT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24321636 13 - 25927173 GCTCTGCTTAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350926 13 + 4669795 GCTCTGCTTAGTT i cerAty1.NW_012001672v1 T 113 C 0 s manLeu1.NW_012102221v1 2761803 13 - 2847728 GCTCTGTTGAGTT i manLeu1.NW_012102221v1 I 4 C 0 s colAng1.NW_012116221v1 877259 13 + 2368649 GCTCTGCTTAGTT i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309168 72 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=92740.000000 s hg38.chr4_KI270789v1_alt 104142 18 + 205944 ATCTGTGTGACTCAGCAT s panTro5.chr4 192895114 18 + 194502333 ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816066 18 + 4876863 ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 169 s nomLeu3.chr7b 112705029 18 + 115148730 ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987200 18 + 190429646 ATCTGTGTGACTCAGCAT i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187929969 18 + 189454096 ATCTGTGTGACTCAGCAT i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24321649 18 - 25927173 ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350939 18 + 4669795 ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309096 18 + 135778131 ATCTGTGTGACTCAGCAT i chlSab2.chr7 T 72 C 0 s manLeu1.NW_012102221v1 2761816 18 - 2847728 ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 T 247 s colAng1.NW_012116221v1 877272 18 + 2368649 ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1694.000000 s hg38.chr4_KI270789v1_alt 104160 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987218 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e manLeu1.NW_012102221v1 2761834 247 - 2847728 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=120026.000000 s hg38.chr4_KI270789v1_alt 104161 24 + 205944 GGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895020 24 + 194502333 GGGAGATGATAGGGAAAATCAGGG i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 24 + 4876863 GGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704992 24 + 115148730 GGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 24 + 190429646 GGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187929988 24 + 189454096 GGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 114 s macNem1.NW_012013133v1 24321668 24 - 25927173 GGGAGATGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 24 + 4669795 GGGAAATGACAGGCAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309115 24 + 135778131 GGGAGATGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877291 24 + 2368649 GGGAGATGACAGGCAAAATCGGGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605699 23 - 190850796 GGGAGACGAT-GGGGAAATCAGGG i calJac3.chr3 T 55 C 0 s saiBol1.JH378165 13094561 23 - 14256875 GGGAGAGGAT-GGGGAAATCAGGG i saiBol1.JH378165 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761834 247 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=58918.000000 s hg38.chr4_KI270789v1_alt 104185 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895044 13 + 194502333 TCTCTGTGTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 13 + 4876863 TCTCTGTGTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 13 + 115148730 TGTCTGTTTAGTT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987129 13 + 190429646 GCTCTGTTGAGTT i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187929898 13 + 189454096 GCTCTGTTGAGTT i macFas5.chr5 T 114 C 0 s macNem1.NW_012013133v1 24321692 13 - 25927173 GCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 13 + 4669795 GCTCTGTTGAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 13 + 135778131 GCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877315 13 + 2368649 GCTCTGTTGAGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605722 13 - 190850796 GCTCTGTTTAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094584 13 - 14256875 GCTCTGTTTAGTT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761834 247 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=-5129.000000 s hg38.chr4_KI270789v1_alt 104198 1 + 205944 -A s panTro5.chr4 192895057 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815952 1 + 4876863 -A i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987142 1 + 190429646 -A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929911 1 + 189454096 -A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321705 1 - 25927173 -A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350995 1 + 4669795 -A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309152 1 + 135778131 -A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877328 1 + 2368649 -A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605735 1 - 190850796 C- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094597 1 - 14256875 G- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761834 247 - 2847728 T e nomLeu3.chr7b 112705029 56 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=6006.000000 s hg38.chr4_KI270789v1_alt 104199 1 + 205944 A s panTro5.chr4 192895058 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815953 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704973 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987143 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929912 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321706 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350996 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309153 1 + 135778131 A i chlSab2.chr7 C 0 T 170 s colAng1.NW_012116221v1 877329 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605736 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094598 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761834 247 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=124710.000000 s hg38.chr4_KI270789v1_alt 104200 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815954 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704974 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987144 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929913 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321707 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350997 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 T 170 C 0 s manLeu1.NW_012102221v1 2761587 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 247 C 0 s colAng1.NW_012116221v1 877330 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605737 17 - 190850796 TCTGTGTGACTCAGCAT i calJac3.chr3 C 0 T 55 s saiBol1.JH378165 13094599 17 - 14256875 TCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 45 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2104.000000 s hg38.chr4_KI270789v1_alt 104217 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 T 170 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 45 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=29390.000000 s hg38.chr4_KI270789v1_alt 104218 6 + 205944 GGGAGA s panTro5.chr4 192895077 6 + 194502333 GGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815972 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704992 6 + 115148730 GGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 6 + 189454096 GGAAGA i macFas5.chr5 T 170 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 6 + 135778131 GGGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 6 - 2847728 GGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 45 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2613.000000 s hg38.chr4_KI270789v1_alt 104224 4 + 205944 CCAT s panTro5.chr4 192895083 4 + 194502333 CGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815978 4 + 4876863 CGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704998 4 + 115148730 TGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 1 + 190429646 ---T i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187929767 1 + 189454096 ---T i macFas5.chr5 C 0 I 3 s cerAty1.NW_012001672v1 3351021 1 + 4669795 ---T i cerAty1.NW_012001672v1 C 0 I 3 s chlSab2.chr7 134309008 1 + 135778131 ---T i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012102221v1 2761611 1 - 2847728 ---T i manLeu1.NW_012102221v1 C 0 I 3 s colAng1.NW_012116221v1 877354 1 + 2368649 ---T i colAng1.NW_012116221v1 C 0 I 3 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 45 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=5005.000000 s hg38.chr4_KI270789v1_alt 104228 1 + 205944 A s panTro5.chr4 192895087 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705002 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987172 1 + 190429646 A i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187929771 1 + 189454096 A i macFas5.chr5 I 3 C 0 s macNem1.NW_012013133v1 24321565 1 - 25927173 A i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3351025 1 + 4669795 A i cerAty1.NW_012001672v1 I 3 C 0 s chlSab2.chr7 134309012 1 + 135778131 A i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012102221v1 2761615 1 - 2847728 A i manLeu1.NW_012102221v1 I 3 C 0 s colAng1.NW_012116221v1 877358 1 + 2368649 A i colAng1.NW_012116221v1 I 3 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 45 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=76394.000000 s hg38.chr4_KI270789v1_alt 104229 13 + 205944 GGGAAAATCAGGG s panTro5.chr4 192895088 13 + 194502333 GGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815983 13 + 4876863 GGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705003 13 + 115148730 GGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987173 13 + 190429646 GGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929772 13 + 189454096 GGGAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321566 13 - 25927173 GGGAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351026 13 + 4669795 GGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 170 s chlSab2.chr7 134309013 13 + 135778131 GGCAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761616 13 - 2847728 GGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877359 13 + 2368649 GGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 57 s saiBol1.JH378165 13094571 13 - 14256875 GGGGAAATCAGGG i saiBol1.JH378165 T 45 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=54588.000000 s hg38.chr4_KI270789v1_alt 104242 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895101 12 + 194502333 TCTCTGTTTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815996 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 12 + 115148730 TGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929785 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321579 12 - 25927173 GCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 12 + 4669795 GCTCTGTTGAGT i cerAty1.NW_012001672v1 T 170 C 0 s chlSab2.chr7 134309026 12 + 135778131 GCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761629 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 12 + 2368649 GCTCTGTTGAGT i colAng1.NW_012116221v1 T 57 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=11067.000000 s hg38.chr4_KI270789v1_alt 104254 3 + 205944 TAA s panTro5.chr4 192895113 2 + 194502333 T-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 3 + 4876863 TAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 3 + 115148730 TAA i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987198 3 + 190429646 TAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929797 3 + 189454096 TAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 3 - 25927173 TAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350881 3 + 4669795 TAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309038 3 + 135778131 TAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 3 - 2847728 TAA i manLeu1.NW_012102221v1 C 0 T 57 s colAng1.NW_012116221v1 877327 3 + 2368649 TAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094596 3 - 14256875 TGA i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=100396.000000 s hg38.chr4_KI270789v1_alt 104257 17 + 205944 TCTCTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816011 17 + 4876863 TCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704862 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987201 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321594 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309041 17 + 135778131 TCTATGCGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761587 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 57 C 0 s colAng1.NW_012116221v1 877330 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094599 17 - 14256875 TCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=108569.000000 s hg38.chr4_KI270789v1_alt 104274 25 + 205944 GGGGAGATGATAGGGAAAATCAGGG s panTro5.chr4 192895076 25 + 194502333 GGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 25 + 4876863 AGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 25 + 115148730 AGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 25 + 190429646 AGGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 212 s macFas5.chr5 187929817 25 + 189454096 AAGGAGATGACAGGGAAAATCAGCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 25 - 25927173 AAGGAGATGACAGGGAAAATCAGCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 25 + 4669795 AAGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 25 + 135778131 AAGGAGATGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 25 - 2847728 AGGGAGATGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 25 + 2368649 AGGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 I 4 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=45077.000000 s hg38.chr4_KI270789v1_alt 104299 14 + 205944 TCTCTGTGTAGTTA s panTro5.chr4 192895101 14 + 194502333 TCTCTGTTTAGTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 14 + 4876863 TCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 14 + 115148730 TCTCCGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929842 14 + 189454096 GCTCTGCTTAGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321636 14 - 25927173 GCTCTGCTTAGTTA i macNem1.NW_012013133v1 C 0 T 56 s cerAty1.NW_012001672v1 3350926 14 + 4669795 GCTCTGCTTAGTTA i cerAty1.NW_012001672v1 C 0 T 56 s chlSab2.chr7 134309083 14 + 135778131 GCTCTGCTTAGTTA i chlSab2.chr7 C 0 T 169 s manLeu1.NW_012102221v1 2761629 14 - 2847728 GCTCTGTTGAGTTA i manLeu1.NW_012102221v1 C 0 T 112 s colAng1.NW_012116221v1 877376 14 + 2368649 GCTCTGTTGAGTTA i colAng1.NW_012116221v1 I 4 T 173 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=66815.000000 s hg38.chr4_KI270789v1_alt 104313 13 + 205944 TCTGTGTGACTCA s panTro5.chr4 192895115 13 + 194502333 TCTGTGTGACTCA i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816067 13 + 4876863 TCTGTGTGACTCA i gorGor5.CYUI01015356v1 C 0 T 113 s nomLeu3.chr7b 112704918 13 + 115148730 TCTGTGTGACTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 13 + 190429646 TCTGTGTGACTCA i rheMac8.chr5 T 212 C 0 s macFas5.chr5 187929856 13 + 189454096 TCTGTGTGACTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321594 13 - 25927173 TCTGTGTGACTCA i macNem1.NW_012013133v1 T 56 C 0 s cerAty1.NW_012001672v1 3350884 13 + 4669795 TCTGTGTGACTCA i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308928 13 + 135778131 TCTGTGTGACTCA i chlSab2.chr7 T 169 C 0 s manLeu1.NW_012102221v1 2761531 13 - 2847728 TCTGTGTGACTCA i manLeu1.NW_012102221v1 T 112 C 0 s colAng1.NW_012116221v1 877217 13 + 2368649 TCCGTGTGACTCA i colAng1.NW_012116221v1 T 173 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=176762.000000 s hg38.chr4_KI270789v1_alt 104326 42 + 205944 CCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT s panTro5.chr4 192895072 42 + 194502333 GCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3815967 42 + 4876863 GCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT i gorGor5.CYUI01015356v1 T 113 T 94 s nomLeu3.chr7b 112704931 42 + 115148730 GCATAGGGAGATGATAGGGAAAATCAGGGTCTCTGTTTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987044 42 + 190429646 GCATAAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929869 42 + 189454096 GCATAGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24321607 42 - 25927173 GCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350897 42 + 4669795 GCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308941 42 + 135778131 GCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761544 42 - 2847728 GCATAAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877230 42 + 2368649 GCATCAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=75771.000000 s hg38.chr4_KI270789v1_alt 104368 18 + 205944 ATCTGTGTGACTCAACAT s panTro5.chr4 192895114 18 + 194502333 ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s nomLeu3.chr7b 112704973 18 + 115148730 ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987086 18 + 190429646 ATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929912 18 + 189454096 ATCTGTGTGACTCAGCAT i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24321649 18 - 25927173 ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350939 18 + 4669795 ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308983 18 + 135778131 ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761586 18 - 2847728 ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877272 18 + 2368649 ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816009 94 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2300.000000 s hg38.chr4_KI270789v1_alt 104386 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816009 94 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=154554.000000 s hg38.chr4_KI270789v1_alt 104387 36 + 205944 GGGAGATGATAGGGAAAATCGGGGTCTCTGTGTAGT s panTro5.chr4 192895020 36 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 36 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGT i gorGor5.CYUI01015356v1 T 94 C 0 s nomLeu3.chr7b 112704992 36 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987105 36 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 36 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 36 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 36 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 36 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 36 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 36 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=15015.000000 s hg38.chr4_KI270789v1_alt 104423 3 + 205944 TAA s panTro5.chr4 192895056 3 + 194502333 TAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 3 + 4876863 TAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 3 + 115148730 TAA i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987141 3 + 190429646 TAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929967 3 + 189454096 TAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321704 3 - 25927173 TAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350994 3 + 4669795 TAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309038 3 + 135778131 TAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 3 - 2847728 TAA i manLeu1.NW_012102221v1 C 0 T 142 s colAng1.NW_012116221v1 877327 3 + 2368649 TAA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=70959.000000 s hg38.chr4_KI270789v1_alt 104426 18 + 205944 TCTGTGTGACTCAGCATG s panTro5.chr4 192895059 18 + 194502333 TCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815954 18 + 4876863 TCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704862 18 + 115148730 TCTGTGTGACTCAGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987144 18 + 190429646 TCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929970 18 + 189454096 TCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321707 18 - 25927173 TCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350997 18 + 4669795 TCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309041 18 + 135778131 TCTATGCGACTCAGCATA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877330 18 + 2368649 TCTGTGTGACTCAGCATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e manLeu1.NW_012102221v1 2761644 142 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=28650.000000 s hg38.chr4_KI270789v1_alt 104444 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704880 6 + 115148730 GGGCGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309059 6 + 135778131 AGGAGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 6 - 14256875 GGGAGA i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761644 142 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=9945.000000 s hg38.chr4_KI270789v1_alt 104450 4 + 205944 CGAT s panTro5.chr4 192895026 4 + 194502333 TGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815921 4 + 4876863 CGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 4 + 115148730 CGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 4 + 190429646 TGAC i rheMac8.chr5 C 0 T 170 s macFas5.chr5 187929994 4 + 189454096 TGAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 4 + 4669795 TGAC i cerAty1.NW_012001672v1 C 0 T 170 s chlSab2.chr7 134309065 4 + 135778131 TGAC i chlSab2.chr7 C 0 T 170 s colAng1.NW_012116221v1 877354 4 + 2368649 TGAC i colAng1.NW_012116221v1 C 0 T 170 s saiBol1.JH378165 13094567 4 - 14256875 GGAT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761644 142 - 2847728 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=134153.000000 s hg38.chr4_KI270789v1_alt 104454 26 + 205944 AGGGAAAATCAGGG----TCTCTGTGTAGT s panTro5.chr4 192895030 26 + 194502333 AGGGAAAATCAGGG----TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 26 + 4876863 AGGGAAAATCAGGG----TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 26 + 115148730 AGGGAAAATCAGGG----TCTCCGTTTAGT i nomLeu3.chr7b C 0 T 57 s rheMac8.chr5 188987002 26 + 190429646 AGGGAAAATCAGGG----GCTCTGTTGAGT i rheMac8.chr5 T 170 C 0 s macFas5.chr5 187929998 30 + 189454096 AGGGAAAATCAGGGGCTTGCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 26 - 25927173 AGGGAAAATCAGGG----GCTCTGTTGAGT i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3350855 26 + 4669795 AGGGAAAATCAGGG----GCTCTGTTGAGT i cerAty1.NW_012001672v1 T 170 C 0 s chlSab2.chr7 134308899 26 + 135778131 AGGGAAAATCAGGG----GCTCTGTTGAGT i chlSab2.chr7 T 170 C 0 s manLeu1.NW_012102221v1 2761502 26 - 2847728 AGGGAAAATCAGGG----GCTCTGTTGAGT i manLeu1.NW_012102221v1 T 142 C 0 s colAng1.NW_012116221v1 877188 26 + 2368649 AGGGAAAATCAGGG----GCTCTGTTGAGT i colAng1.NW_012116221v1 T 170 C 0 s saiBol1.JH378165 13094571 25 - 14256875 -GGGGAAATCAGGG----GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=110440.000000 s hg38.chr4_KI270789v1_alt 104480 20 + 205944 TAATCTCTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 20 + 4876863 TAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 57 C 0 s rheMac8.chr5 188987028 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930028 19 + 189454096 T-ATCAGTGTGACTCAGCAT i macFas5.chr5 C 0 T 230 s macNem1.NW_012013133v1 24321591 20 - 25927173 TAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350881 20 + 4669795 TAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308925 20 + 135778131 TAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761528 20 - 2847728 TAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877214 20 + 2368649 TAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=148687.000000 s hg38.chr4_KI270789v1_alt 104500 36 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG s panTro5.chr4 192895076 36 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815971 36 + 4876863 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 36 + 115148730 AGGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987048 36 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 36 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAG i macFas5.chr5 T 230 C 0 s macNem1.NW_012013133v1 24321611 36 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 36 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 36 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 36 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 36 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=96400.000000 s hg38.chr4_KI270789v1_alt 104536 20 + 205944 TT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895112 20 + 194502333 TT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816007 21 + 4876863 TTAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TA-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987084 20 + 190429646 TT-ATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929853 20 + 189454096 TT-ATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321647 20 - 25927173 TT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350937 20 + 4669795 TT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308981 20 + 135778131 TT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761584 20 - 2847728 TT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877270 20 + 2368649 TT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2997.000000 s hg38.chr4_KI270789v1_alt 104556 1 + 205944 G s gorGor5.CYUI01015356v1 3816028 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=149578.000000 s hg38.chr4_KI270789v1_alt 104557 35 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG s panTro5.chr4 192895020 35 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAG i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3816029 35 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 35 + 115148730 GGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987105 35 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 35 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 35 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 35 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 35 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 35 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 35 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89578.000000 s hg38.chr4_KI270789v1_alt 104592 20 + 205944 -TTA-TCTGTGTGACTCAGCAT s panTro5.chr4 192895055 21 + 194502333 -TTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816064 20 + 4876863 -TTA-TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 169 s nomLeu3.chr7b 112704859 20 + 115148730 -TAA-TCTGTGTGACTCAGCAT i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987140 21 + 190429646 TTAA-TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929909 21 + 189454096 TTAA-TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321703 21 - 25927173 TTAA-TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350993 21 + 4669795 TTAA-TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309037 21 + 135778131 TTAA-TCTATGCGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761640 21 - 2847728 TTAA-TCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877326 21 + 2368649 TTAA-TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2152.000000 s hg38.chr4_KI270789v1_alt 104612 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=27593.000000 s hg38.chr4_KI270789v1_alt 104613 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704880 6 + 115148730 GGGCGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309059 6 + 135778131 AGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761662 6 - 2847728 AGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=11877.000000 s hg38.chr4_KI270789v1_alt 104619 4 + 205944 CGAT s panTro5.chr4 192895026 4 + 194502333 TGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815921 4 + 4876863 CGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 4 + 115148730 CGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 4 + 190429646 TGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 4 + 189454096 TGAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 4 + 4669795 TGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309065 4 + 135778131 TGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 4 - 2847728 TGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 4 + 2368649 TGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=65925.000000 s hg38.chr4_KI270789v1_alt 104623 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987172 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929941 14 + 189454096 AGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3351025 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 170 s chlSab2.chr7 134309069 14 + 135778131 AGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761672 14 - 2847728 AGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877358 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 184 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=29695.000000 s hg38.chr4_KI270789v1_alt 104637 11 + 205944 TCTCTGTGTAG s panTro5.chr4 192895044 11 + 194502333 TCTCTGTGTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 11 + 4876863 TCTCTGTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 11 + 115148730 TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987186 11 + 190429646 GCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 11 + 189454096 GCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321579 11 - 25927173 GCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 11 + 4669795 GCTCTGTTGAG i cerAty1.NW_012001672v1 T 170 C 0 s chlSab2.chr7 134309083 11 + 135778131 GCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 11 - 2847728 GCTCTGCTTAG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=75411.000000 s hg38.chr4_KI270789v1_alt 104648 21 + 205944 TTA-TCTGTGTGACTCAGCATG s panTro5.chr4 192895055 22 + 194502333 TTAATCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815950 22 + 4876863 TTAATCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704859 21 + 115148730 -TAATCTGTGTGACTCAGCATA i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987197 22 + 190429646 TTAATCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929966 22 + 189454096 TTAATCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321590 22 - 25927173 TTAATCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350880 22 + 4669795 TTAATCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309094 21 + 135778131 TT-ATCTGTGTGACTCAGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761697 21 - 2847728 TT-ATCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=34117.000000 s hg38.chr4_KI270789v1_alt 104669 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321612 10 - 25927173 AGGAGATGAC i macNem1.NW_012013133v1 C 0 T 57 s cerAty1.NW_012001672v1 3350902 10 + 4669795 AGGAGATGAC i cerAty1.NW_012001672v1 C 0 T 57 s chlSab2.chr7 134309115 10 + 135778131 GGGAGATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71285.000000 s hg38.chr4_KI270789v1_alt 104679 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987229 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 T 241 s macFas5.chr5 187929998 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 T 170 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 57 C 0 s cerAty1.NW_012001672v1 3350855 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 T 57 C 0 s chlSab2.chr7 134309125 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761728 14 - 2847728 AGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877188 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 T 184 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=104213.000000 s hg38.chr4_KI270789v1_alt 104693 31 + 205944 TCTCTGTGTAGTTA-TCTGTGTGACTCAGCAT s panTro5.chr4 192895044 32 + 194502333 TCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 32 + 4876863 TCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 31 + 115148730 TCTCCGTTTAGTTA-TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929842 31 + 189454096 GCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macFas5.chr5 T 170 C 0 s macNem1.NW_012013133v1 24321579 32 - 25927173 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 32 + 4669795 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 32 + 135778131 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 272 s manLeu1.NW_012102221v1 2761742 32 - 2847728 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877202 32 + 2368649 GCTCTGTTGAGTTAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=-200.000000 s hg38.chr4_KI270789v1_alt 104724 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=27946.000000 s hg38.chr4_KI270789v1_alt 104725 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929874 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321612 10 - 25927173 AGGAGATGAC i macNem1.NW_012013133v1 C 0 T 57 s cerAty1.NW_012001672v1 3350902 10 + 4669795 AGGAGATGAC i cerAty1.NW_012001672v1 C 0 T 57 s manLeu1.NW_012102221v1 2761775 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877235 10 + 2368649 AGGAGATGAC i colAng1.NW_012116221v1 C 0 T 57 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=197761.000000 s hg38.chr4_KI270789v1_alt 104735 45 + 205944 AGGGAAAATCAGGG----TCTCTGTGTAGTTA-TCTGTGTGACTCAGCAT s panTro5.chr4 192895030 46 + 194502333 AGGGAAAATCAGGG----TCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 46 + 4876863 AGGGAAAATCAGGG----TCTCTGTGTAGTTAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704946 45 + 115148730 AGGGAAAATCAGGG----TCTCTGTTTAGTTA-TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 46 + 190429646 AGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 T 241 C 0 s macFas5.chr5 187929884 46 + 189454096 AGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 46 - 25927173 AGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 57 C 0 s cerAty1.NW_012001672v1 3350855 46 + 4669795 AGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 57 C 0 s chlSab2.chr7 134308899 46 + 135778131 AGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 T 272 C 0 s manLeu1.NW_012102221v1 2761785 49 - 2847728 AGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 T 286 s colAng1.NW_012116221v1 877188 46 + 2368649 AGGGAAAATCAGGG----GCTCTGTTGAGTTAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 57 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=246426.000000 s hg38.chr4_KI270789v1_alt 104780 56 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704991 56 + 115148730 AGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTT-ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 168 s rheMac8.chr5 188987048 56 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 57 + 189454096 AGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 56 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 56 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 56 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 56 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 286 C 0 s colAng1.NW_012116221v1 877234 56 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=44888.000000 s hg38.chr4_KI270789v1_alt 104836 11 + 205944 GGGGAGACGAT s panTro5.chr4 192895076 11 + 194502333 GGGGAGACGAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 11 + 4876863 AGGGAGACGAT i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 11 + 115148730 AGGGCGACGAC i nomLeu3.chr7b T 168 C 0 s rheMac8.chr5 188987104 11 + 190429646 AGGGAGATGAC i rheMac8.chr5 C 0 T 113 s macFas5.chr5 187929987 11 + 189454096 AGGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 11 - 25927173 AGGGAGATGAC i macNem1.NW_012013133v1 C 0 T 113 s cerAty1.NW_012001672v1 3350957 11 + 4669795 AGGGAAATGAC i cerAty1.NW_012001672v1 C 0 T 113 s chlSab2.chr7 134309001 11 + 135778131 AGGGAAATGAC i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761604 11 - 2847728 AGGGAGATGAC i manLeu1.NW_012102221v1 C 0 T 113 s colAng1.NW_012116221v1 877290 11 + 2368649 AGGGAGATGAC i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=73535.000000 s hg38.chr4_KI270789v1_alt 104847 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895087 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816039 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 T 113 C 0 s macFas5.chr5 187929998 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 T 227 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 113 C 0 s cerAty1.NW_012001672v1 3350855 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 T 113 C 0 s chlSab2.chr7 134308899 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761502 14 - 2847728 AGGGAAAATCAGGG i manLeu1.NW_012102221v1 T 113 C 0 s colAng1.NW_012116221v1 877188 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=42220.000000 s hg38.chr4_KI270789v1_alt 104861 11 + 205944 TCTCTGTGCAG s panTro5.chr4 192895101 11 + 194502333 TCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 11 + 4876863 TCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 11 + 115148730 TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987016 11 + 190429646 GCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929785 11 + 189454096 GCTCTGTTGAG i macFas5.chr5 T 227 C 0 s macNem1.NW_012013133v1 24321579 11 - 25927173 GCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 11 + 4669795 GCTCTGTTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308913 11 + 135778131 GCTCTGTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761516 11 - 2847728 GCTCTGTTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877202 11 + 2368649 GCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=98775.000000 s hg38.chr4_KI270789v1_alt 104872 20 + 205944 -TTATCTGTGTGACTCAGCAT s panTro5.chr4 192895112 20 + 194502333 -TTATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816064 20 + 4876863 -TTATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 169 s nomLeu3.chr7b 112704859 20 + 115148730 -TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987027 21 + 190429646 TTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929796 21 + 189454096 TTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321590 21 - 25927173 TTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350880 21 + 4669795 TTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308924 21 + 135778131 TTAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761527 21 - 2847728 TTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877213 21 + 2368649 TTAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=771.000000 s hg38.chr4_KI270789v1_alt 104892 1 + 205944 G s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 1 + 189454096 A i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321611 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=143209.000000 s hg38.chr4_KI270789v1_alt 104893 35 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG s panTro5.chr4 192895020 35 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAG i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 35 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704880 35 + 115148730 GGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987049 35 + 190429646 AGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 35 + 189454096 GGAAGATGAGAGGGAAAATCAGGGGCTCTGTTGAG i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321612 35 - 25927173 AGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350902 35 + 4669795 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308946 35 + 135778131 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761549 35 - 2847728 AGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877235 35 + 2368649 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89305.000000 s hg38.chr4_KI270789v1_alt 104928 21 + 205944 TTA--TCTGTGTGACTCAGCATG s panTro5.chr4 192895055 22 + 194502333 TTA-ATCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815950 22 + 4876863 TTA-ATCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704859 21 + 115148730 -TA-ATCTGTGTGACTCAGCATA i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987084 21 + 190429646 -TT-ATCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929796 22 + 189454096 -TTAATCTGTGTGACTCAGCATA i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321647 21 - 25927173 -TT-ATCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350937 21 + 4669795 -TT-ATCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308981 21 + 135778131 -TT-ATCTGTGTGACTCAGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761584 21 - 2847728 -TT-ATCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877270 21 + 2368649 -TT-ATCTGTGTGACTCAGCATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=39397.000000 s hg38.chr4_KI270789v1_alt 104949 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 10 + 189454096 GGAAGATGAG i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321668 10 - 25927173 GGGAGATGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 10 + 4669795 GGGAAATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 10 + 135778131 GGGAAATGAC i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761605 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=105385.000000 s hg38.chr4_KI270789v1_alt 104959 25 + 205944 AGGGAAAATCAGGGTCTCTGTGTAG s panTro5.chr4 192895030 25 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 25 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 25 + 115148730 AGGGAAAATCAGGGTCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987115 25 + 190429646 AGGCAAAATCAGGGGCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929771 25 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321678 25 - 25927173 AGGCAAAATCAGGGGCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350968 25 + 4669795 AGGCAAAATCAGGGGCTCTGTTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308899 25 + 135778131 AGGGAAAATCAGGGGCTCTGTTGAG i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761615 25 - 2847728 AGGCAAAATCAGGGGCTCTGTTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877301 25 + 2368649 AGGCAAAATCGGGGGCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=100909.000000 s hg38.chr4_KI270789v1_alt 104984 21 + 205944 TTA-TCTGTGTGACTCAGCATG s panTro5.chr4 192895055 22 + 194502333 TTAATCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815950 22 + 4876863 TTAATCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704859 21 + 115148730 -TAATCTGTGTGACTCAGCATA i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987140 22 + 190429646 TTAATCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929796 22 + 189454096 TTAATCTGTGTGACTCAGCATA i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321703 22 - 25927173 TTAATCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350993 22 + 4669795 TTAATCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308924 22 + 135778131 TTAATCTGTGTGACTCAGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761640 22 - 2847728 TTAATCTACGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877326 22 + 2368649 TTAATCTGTGTGACTCAGCATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=26283.000000 s hg38.chr4_KI270789v1_alt 105005 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704880 6 + 115148730 GGGCGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929761 6 + 189454096 GGAAGA i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308946 6 + 135778131 AGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761662 6 - 2847728 AGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=10278.000000 s hg38.chr4_KI270789v1_alt 105011 4 + 205944 CGAT s panTro5.chr4 192895026 4 + 194502333 TGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815921 4 + 4876863 CGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 4 + 115148730 CGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 4 + 190429646 TGAC i rheMac8.chr5 C 0 T 170 s macFas5.chr5 187929767 4 + 189454096 TGAG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 4 + 4669795 TGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308952 4 + 135778131 TGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 4 - 2847728 TGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 4 + 2368649 TGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71285.000000 s hg38.chr4_KI270789v1_alt 105015 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 T 170 C 0 s macFas5.chr5 187929771 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3351025 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 170 s chlSab2.chr7 134308956 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761672 14 - 2847728 AGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877358 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 184 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=102457.000000 s hg38.chr4_KI270789v1_alt 105029 32 + 205944 TCTCTGTGTAGTTA-TCTGTGTGACTCAGCATG s panTro5.chr4 192895044 33 + 194502333 TCTCTGTGTAGTTAATCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815939 33 + 4876863 TCTCTGTGTAGTTAATCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 32 + 115148730 TCTCCGTTTAGTTA-TCTGTGTGACTCAGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987016 33 + 190429646 GCTCTGTTGAGTTAATCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929785 33 + 189454096 GCTCTGTTGAGTTAATCTGTGTGACTCAGCATA i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321579 33 - 25927173 GCTCTGTTGAGTTAATCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 33 + 4669795 GCTCTGTTGAGTTAATCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 T 170 C 0 s chlSab2.chr7 134308970 32 + 135778131 GCTCTGCTTAGTT-ATCTGTGTGACTCAGCATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 32 - 2847728 GCTCTGCTTAGTT-ATCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=31646.000000 s hg38.chr4_KI270789v1_alt 105061 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987049 10 + 190429646 AGGAGATGAC i rheMac8.chr5 C 0 T 57 s macFas5.chr5 187929761 10 + 189454096 GGAAGATGAG i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321612 10 - 25927173 AGGAGATGAC i macNem1.NW_012013133v1 C 0 T 57 s cerAty1.NW_012001672v1 3350902 10 + 4669795 AGGAGATGAC i cerAty1.NW_012001672v1 C 0 T 57 s chlSab2.chr7 134309002 10 + 135778131 GGGAAATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=450107.000000 s hg38.chr4_KI270789v1_alt 105071 101 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGTTA-TCTGTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGG----TCTCTGTGTAGTTATCTGTGTGACTCAGCAT s panTro5.chr4 192895030 102 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTTATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815982 102 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTTATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 169 s nomLeu3.chr7b 112704946 101 + 115148730 AGGGAAAATCAGGGTCTCTGTTTAGTTA-TCTGTGTGACTCAGCATAGGGAGATGATAGGGAAAATCAGGG----TGTCTGTTTAGTTATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987002 102 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCTGCG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i rheMac8.chr5 T 57 C 0 s macFas5.chr5 187929771 102 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 102 - 25927173 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 57 C 0 s cerAty1.NW_012001672v1 3350855 102 + 4669795 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 57 C 0 s chlSab2.chr7 134309012 102 + 135778131 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTATGCGACTCAGCATAAGGAGATGACAGGGAAAATCAACG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761728 106 - 2847728 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTTATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 T 92 s colAng1.NW_012116221v1 877188 102 + 2368649 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCCGTGTGACTCAGCATCAGGAGATGACAGGGAAAATCAGGG----GCTCTGCTTAGTTATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 184 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1694.000000 s hg38.chr4_KI270789v1_alt 105172 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e manLeu1.NW_012102221v1 2761834 92 - 2847728 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=102810.000000 s hg38.chr4_KI270789v1_alt 105173 24 + 205944 GGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895020 24 + 194502333 GGGAGATGATAGGGAAAATCAGGG i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 24 + 4876863 GGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704992 24 + 115148730 GGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 24 + 190429646 GGGAGATGACAGGCAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 24 + 189454096 GGGAGATGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 24 - 25927173 GGGAGATGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 24 + 4669795 GGGAAATGACAGGCAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309115 24 + 135778131 GGGAGATGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877291 24 + 2368649 GGGAGATGACAGGCAAAATCGGGG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 23 - 14256875 GGGAGAGGAT-GGGGAAATCAGGG i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e manLeu1.NW_012102221v1 2761834 92 - 2847728 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=165735.000000 s hg38.chr4_KI270789v1_alt 105197 32 + 205944 TCTCTGTGTAGTTAATCTCTGTGACTCAGCAT s panTro5.chr4 192895044 32 + 194502333 TCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 32 + 4876863 TCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 31 + 115148730 TGTCTGTTTAGTT-ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987129 32 + 190429646 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929898 32 + 189454096 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321692 32 - 25927173 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 32 + 4669795 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 32 + 135778131 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 272 s manLeu1.NW_012102221v1 2761742 32 - 2847728 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 92 C 0 s colAng1.NW_012116221v1 877315 32 + 2368649 GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094584 32 - 14256875 GCTCTGTTTAGTTGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1560.000000 s hg38.chr4_KI270789v1_alt 105229 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=38412.000000 s hg38.chr4_KI270789v1_alt 105230 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704992 6 + 115148730 GGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761775 6 - 2847728 GGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605699 6 - 190850796 GGGAGA i calJac3.chr3 T 55 C 0 s saiBol1.JH378165 13094561 6 - 14256875 GGGAGA i saiBol1.JH378165 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e chlSab2.chr7 134309171 272 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71956.000000 s hg38.chr4_KI270789v1_alt 105236 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895026 18 + 194502333 TGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815921 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704998 18 + 115148730 TGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 18 + 189454096 TGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 184 s manLeu1.NW_012102221v1 2761781 18 - 2847728 TGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 297 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 184 s calJac3.chr3 189605705 17 - 190850796 CGAT-GGGGAAATCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094567 17 - 14256875 GGAT-GGGGAAATCAGGG i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e chlSab2.chr7 134309171 272 + 135778131 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=21284.000000 s hg38.chr4_KI270789v1_alt 105254 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 12 + 115148730 TGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s calJac3.chr3 189605722 12 - 190850796 GCTCTGTTTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 297 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=49881.000000 s hg38.chr4_KI270789v1_alt 105266 20 + 205944 TAATCTGTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 20 + 4876863 TAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987198 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929967 20 + 189454096 TAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s calJac3.chr3 189605734 20 - 190850796 TCATCTGTGTGACTCAGCAT i calJac3.chr3 C 0 T 55 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 297 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=294.000000 s hg38.chr4_KI270789v1_alt 105286 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 1 + 189454096 A i macFas5.chr5 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 297 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=15054.000000 s hg38.chr4_KI270789v1_alt 105287 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s saiBol1.JH378165 13094561 10 - 14256875 GGGAGAGGAT i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 297 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=85569.000000 s hg38.chr4_KI270789v1_alt 105297 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987229 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 T 241 s macFas5.chr5 187929998 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 I 4 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3350855 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 T 184 C 0 s chlSab2.chr7 134308899 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 T 272 C 0 s manLeu1.NW_012102221v1 2761502 14 - 2847728 AGGGAAAATCAGGG i manLeu1.NW_012102221v1 T 297 C 0 s colAng1.NW_012116221v1 877188 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 T 184 C 0 s saiBol1.JH378165 13094571 13 - 14256875 -GGGGAAATCAGGG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=44361.000000 s hg38.chr4_KI270789v1_alt 105311 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815996 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 12 + 115148730 TCTCCGTTTAGT i nomLeu3.chr7b C 0 T 57 s macFas5.chr5 187930016 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 I 4 C 0 s macNem1.NW_012013133v1 24321579 12 - 25927173 GCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350869 12 + 4669795 GCTCTGTTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308913 12 + 135778131 GCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761516 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877202 12 + 2368649 GCTCTGTTGAGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89743.000000 s hg38.chr4_KI270789v1_alt 105323 20 + 205944 TAATCTCTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 20 + 4876863 TAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 57 C 0 s macFas5.chr5 187930028 19 + 189454096 T-ATCAGTGTGACTCAGCAT i macFas5.chr5 C 0 T 286 s macNem1.NW_012013133v1 24321591 20 - 25927173 TAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3350881 20 + 4669795 TAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134308925 20 + 135778131 TAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2761528 20 - 2847728 TAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 877214 20 + 2368649 TAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 I 1 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=67.000000 s hg38.chr4_KI270789v1_alt 105343 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e colAng1.NW_012116221v1 877234 1 + 2368649 I e manLeu1.NW_012102221v1 2761548 1 - 2847728 I e chlSab2.chr7 134308945 1 + 135778131 I e cerAty1.NW_012001672v1 3350901 1 + 4669795 I e macNem1.NW_012013133v1 24321611 1 - 25927173 I e macFas5.chr5 187930047 286 + 189454096 T e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=28314.000000 s hg38.chr4_KI270789v1_alt 105344 10 + 205944 GGGAGACGAT s panTro5.chr4 192895077 10 + 194502333 GGGAGACGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816029 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929761 10 + 189454096 GGAAGATGAG i macFas5.chr5 T 286 C 0 s macNem1.NW_012013133v1 24321612 10 - 25927173 AGGAGATGAC i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3350902 10 + 4669795 AGGAGATGAC i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134308946 10 + 135778131 AGGAGATGAC i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2761549 10 - 2847728 AGGCGATGAC i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 877235 10 + 2368649 AGGAGATGAC i colAng1.NW_012116221v1 I 1 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e rheMac8.chr5 188987243 241 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=208659.000000 s hg38.chr4_KI270789v1_alt 105354 45 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895087 45 + 194502333 AGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816039 45 + 4876863 AGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704890 45 + 115148730 AGGGAAAATCAGGGTCTCCGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 46 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 T 241 C 0 s macFas5.chr5 187929771 46 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321622 45 - 25927173 AGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350912 45 + 4669795 AGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308956 45 + 135778131 AGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761559 45 - 2847728 AGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877245 45 + 2368649 AGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2997.000000 s hg38.chr4_KI270789v1_alt 105399 1 + 205944 G s gorGor5.CYUI01015356v1 3816028 1 + 4876863 A i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 1 + 189454096 A i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=40442.000000 s hg38.chr4_KI270789v1_alt 105400 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3816029 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987049 10 + 190429646 AGGAGATGAC i rheMac8.chr5 C 0 T 57 s macFas5.chr5 187929761 10 + 189454096 GGAAGATGAG i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321668 10 - 25927173 GGGAGATGAC i macNem1.NW_012013133v1 C 0 T 113 s cerAty1.NW_012001672v1 3350958 10 + 4669795 GGGAAATGAC i cerAty1.NW_012001672v1 C 0 T 113 s chlSab2.chr7 134309002 10 + 135778131 GGGAAATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=200688.000000 s hg38.chr4_KI270789v1_alt 105410 45 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGTTA-TCTGTGTGACTCAGCAT s panTro5.chr4 192895030 46 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816039 45 + 4876863 AGGGAAAATCAGGGTCTCTGTTTAGTTA-TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704946 45 + 115148730 AGGGAAAATCAGGGTCTCTGTTTAGTTA-TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 46 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 T 57 C 0 s macFas5.chr5 187929771 46 + 189454096 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 46 - 25927173 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 113 C 0 s cerAty1.NW_012001672v1 3350855 46 + 4669795 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 113 C 0 s chlSab2.chr7 134309012 46 + 135778131 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTATGCGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761615 46 - 2847728 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877188 46 + 2368649 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=253572.000000 s hg38.chr4_KI270789v1_alt 105455 56 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 56 T 169 s nomLeu3.chr7b 112704991 56 + 115148730 AGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTTATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987048 56 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 56 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 56 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 56 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 56 + 135778131 AAGGAGATGACAGGGAAAATCAACGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 56 - 2847728 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 56 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2300.000000 s hg38.chr4_KI270789v1_alt 105511 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=290506.000000 s hg38.chr4_KI270789v1_alt 105512 56 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTCTGTGACTCAGCAT s panTro5.chr4 192895020 56 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 56 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704992 55 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTT-ATTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 168 s rheMac8.chr5 188987105 56 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 56 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 56 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 56 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309115 56 + 135778131 GGGAGATGACAGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 272 s manLeu1.NW_012102221v1 2761718 56 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 56 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 55 - 14256875 GGGAGAGGAT-GGGGAAATCAGGGGCTCTGTTTAGTTGATCTGTGTGACTCAGCAT i saiBol1.JH378165 T 55 T 48 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1560.000000 s hg38.chr4_KI270789v1_alt 105568 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b T 168 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 48 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=29960.000000 s hg38.chr4_KI270789v1_alt 105569 6 + 205944 GGGAGA s panTro5.chr4 192895077 6 + 194502333 GGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815915 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704880 6 + 115148730 GGGCGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761775 6 - 2847728 GGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605699 6 - 190850796 GGGAGA i calJac3.chr3 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 48 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1135.000000 s hg38.chr4_KI270789v1_alt 105575 1 + 205944 C s panTro5.chr4 192895083 1 + 194502333 C i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815921 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 1 + 189454096 T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761781 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605705 1 - 190850796 C i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 48 - 14256875 T e chlSab2.chr7 134309171 272 + 135778131 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=44068.000000 s hg38.chr4_KI270789v1_alt 105576 10 + 205944 GATAGGGAAA s panTro5.chr4 192895027 10 + 194502333 GATAGGGAAA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815922 10 + 4876863 GATAGGGAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704887 10 + 115148730 GACAGGGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987169 10 + 190429646 GACAGGGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929938 10 + 189454096 GACAGGCAAA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351022 10 + 4669795 GACAGGGAAA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761782 10 - 2847728 GACAGGGAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877355 10 + 2368649 GACAGGGAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605706 10 - 190850796 GATGGGGAAA i calJac3.chr3 C 0 T 17 s saiBol1.JH378165 13094568 10 - 14256875 GATGGGGAAA i saiBol1.JH378165 T 48 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e chlSab2.chr7 134309171 272 + 135778131 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=29196.000000 s hg38.chr4_KI270789v1_alt 105586 7 + 205944 ATCAGGG s panTro5.chr4 192895037 7 + 194502333 ATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815932 7 + 4876863 ATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704897 7 + 115148730 ATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987179 7 + 190429646 ATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929948 7 + 189454096 ATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351032 7 + 4669795 ATCAGGG i cerAty1.NW_012001672v1 C 0 T 184 s manLeu1.NW_012102221v1 2761792 7 - 2847728 ATCAGGG i manLeu1.NW_012102221v1 C 0 T 212 s colAng1.NW_012116221v1 877365 7 + 2368649 ATCAGGG i colAng1.NW_012116221v1 C 0 T 184 s saiBol1.JH378165 13094578 6 - 14256875 -TCAGGG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e chlSab2.chr7 134309171 272 + 135778131 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=16049.000000 s hg38.chr4_KI270789v1_alt 105593 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 12 + 115148730 TCTCCGTTTAGT i nomLeu3.chr7b C 0 T 57 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 212 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=3090.000000 s hg38.chr4_KI270789v1_alt 105605 2 + 205944 TA s panTro5.chr4 192895056 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 2 + 115148730 TA i nomLeu3.chr7b T 57 C 0 s rheMac8.chr5 188987198 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929967 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s saiBol1.JH378165 13094596 2 - 14256875 TG i saiBol1.JH378165 C 0 T 37 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 212 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1365.000000 s hg38.chr4_KI270789v1_alt 105607 1 + 205944 A s panTro5.chr4 192895058 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815953 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704861 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987200 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929969 1 + 189454096 A i macFas5.chr5 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094598 37 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 212 - 2847728 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=33687.000000 s hg38.chr4_KI270789v1_alt 105608 18 + 205944 TCTGTGTGACTCAGCATG s panTro5.chr4 192895059 18 + 194502333 TCTGTGTGATTCAGCATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815954 18 + 4876863 TCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704862 18 + 115148730 TCTGTGTGACTCAGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987201 18 + 190429646 TCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929970 18 + 189454096 TCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s manLeu1.NW_012102221v1 2761587 18 - 2847728 TCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 T 212 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094598 37 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=14520.000000 s hg38.chr4_KI270789v1_alt 105626 7 + 205944 GGGAGAC s panTro5.chr4 192895077 7 + 194502333 GGGAGAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815972 7 + 4876863 GGGAGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 7 + 115148730 GGGCGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 7 + 190429646 GGGAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 7 + 189454096 GGGAGAT i macFas5.chr5 C 0 T 227 s manLeu1.NW_012102221v1 2761605 7 - 2847728 GGGAGAT i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13094561 7 - 14256875 GGGAGAG i saiBol1.JH378165 T 37 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=4991.000000 s hg38.chr4_KI270789v1_alt 105633 3 + 205944 GAT s panTro5.chr4 192895084 3 + 194502333 GAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815979 3 + 4876863 GAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704887 3 + 115148730 GAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987226 3 + 190429646 GAC i rheMac8.chr5 C 0 T 227 s macFas5.chr5 187929768 3 + 189454096 GAG i macFas5.chr5 T 227 C 0 s manLeu1.NW_012102221v1 2761612 3 - 2847728 GAC i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13094568 3 - 14256875 GAT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309171 272 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=120203.000000 s hg38.chr4_KI270789v1_alt 105636 23 + 205944 AGGGAAAATCAGGGTCTCTGTGT s panTro5.chr4 192895087 23 + 194502333 AGGGAAAATCAGGGTCTCTGTTT i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815982 23 + 4876863 AGGGAAAATCAGGGTCTCTGTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 23 + 115148730 AGGGAAAATCAGGGTCTCCGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987002 23 + 190429646 AGGGAAAATCAGGGGCTCTGTTG i rheMac8.chr5 T 227 C 0 s macFas5.chr5 187929771 23 + 189454096 AGGGAAAATCAGGGGCTCTGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 23 - 25927173 AGGGAAAATCAGGGGCTCTGTTG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3350855 23 + 4669795 AGGGAAAATCAGGGGCTCTGTTG i cerAty1.NW_012001672v1 T 184 C 0 s chlSab2.chr7 134308899 23 + 135778131 AGGGAAAATCAGGGGCTCTGTTG i chlSab2.chr7 T 272 C 0 s manLeu1.NW_012102221v1 2761615 23 - 2847728 AGGCAAAATCAGGGGCTCTGTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877188 23 + 2368649 AGGGAAAATCAGGGGCTCTGTTG i colAng1.NW_012116221v1 T 184 C 0 s saiBol1.JH378165 13094571 22 - 14256875 -GGGGAAATCAGGGGCTCTGTTT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=18612.000000 s hg38.chr4_KI270789v1_alt 105659 3 + 205944 AGT s panTro5.chr4 192895053 3 + 194502333 AGT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3816005 3 + 4876863 AGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704913 3 + 115148730 AGT i nomLeu3.chr7b C 0 T 57 s rheMac8.chr5 188987025 3 + 190429646 AGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929794 3 + 189454096 AGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321588 3 - 25927173 AGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350878 3 + 4669795 AGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308922 3 + 135778131 AGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761638 3 - 2847728 AGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877211 3 + 2368649 AGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094593 3 - 14256875 AGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=16676.000000 s hg38.chr4_KI270789v1_alt 105662 3 + 205944 TAA s panTro5.chr4 192895056 3 + 194502333 TAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 3 + 4876863 TAA i gorGor5.CYUI01015356v1 C 0 T 96 s nomLeu3.chr7b 112704859 3 + 115148730 TAA i nomLeu3.chr7b T 57 C 0 s rheMac8.chr5 188987028 3 + 190429646 TAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929797 3 + 189454096 TAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 3 - 25927173 TAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350881 3 + 4669795 TAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308925 3 + 135778131 TAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 3 - 2847728 TAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877214 3 + 2368649 TAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094596 3 - 14256875 TGA i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=81877.000000 s hg38.chr4_KI270789v1_alt 105665 17 + 205944 TCTCTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112704862 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321594 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308928 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761644 17 - 2847728 TCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877217 17 + 2368649 TCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094599 17 - 14256875 TCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e gorGor5.CYUI01015356v1 3816011 96 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=529.000000 s hg38.chr4_KI270789v1_alt 105682 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e gorGor5.CYUI01015356v1 3816011 96 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=248791.000000 s hg38.chr4_KI270789v1_alt 105683 55 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895077 55 + 194502333 GGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815915 56 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 96 C 0 s nomLeu3.chr7b 112704880 55 + 115148730 GGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987049 55 + 190429646 AGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929818 55 + 189454096 AGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321612 55 - 25927173 AGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350902 55 + 4669795 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308946 55 + 135778131 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761662 55 - 2847728 AGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877235 55 + 2368649 AGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2152.000000 s hg38.chr4_KI270789v1_alt 105738 1 + 205944 G s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605716 17 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=60904.000000 s hg38.chr4_KI270789v1_alt 105739 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 10 - 25927173 GGGAGATGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 10 + 4669795 GGGAAATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 10 + 135778131 GGGAAATGAC i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605699 10 - 190850796 GGGAGACGAT i calJac3.chr3 T 17 C 0 s saiBol1.JH378165 13094561 10 - 14256875 GGGAGAGGAT i saiBol1.JH378165 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=290594.000000 s hg38.chr4_KI270789v1_alt 105749 46 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT s panTro5.chr4 192895030 46 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 46 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAGTTAATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704946 45 + 115148730 AGGGAAAATCAGGGTCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987115 46 + 190429646 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929884 46 + 189454096 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321678 46 - 25927173 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350968 46 + 4669795 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308899 46 + 135778131 AGGGAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761728 46 - 2847728 AGGCAAAATCAGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877301 46 + 2368649 AGGCAAAATCGGGGGCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605709 45 - 190850796 -GGGGAAATCAGGGGCTCTGTTTAGTTCATCTGTGTGACTCAGCAT i calJac3.chr3 C 0 T 55 s saiBol1.JH378165 13094571 45 - 14256875 -GGGGAAATCAGGGGCTCTGTTTAGTTGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2104.000000 s hg38.chr4_KI270789v1_alt 105795 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761774 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=54022.000000 s hg38.chr4_KI270789v1_alt 105796 10 + 205944 GGGAGATGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815915 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704992 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 10 - 25927173 GGGAGATGAC i macNem1.NW_012013133v1 C 0 T 170 s cerAty1.NW_012001672v1 3351015 10 + 4669795 GGGAGATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308946 10 + 135778131 AGGAGATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761775 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094561 10 - 14256875 GGGAGAGGAT i saiBol1.JH378165 T 55 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=68855.000000 s hg38.chr4_KI270789v1_alt 105806 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815925 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705002 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987172 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929941 14 + 189454096 AGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351025 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 113 s chlSab2.chr7 134308956 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761785 14 - 2847728 AGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 113 s colAng1.NW_012116221v1 877358 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 113 s saiBol1.JH378165 13094571 13 - 14256875 -GGGGAAATCAGGG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=42303.000000 s hg38.chr4_KI270789v1_alt 105820 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 12 + 115148730 TGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350926 12 + 4669795 GCTCTGCTTAGT i cerAty1.NW_012001672v1 T 113 C 0 s chlSab2.chr7 134308970 12 + 135778131 GCTCTGCTTAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 12 - 2847728 GCTCTGCTTAGT i manLeu1.NW_012102221v1 T 113 C 0 s colAng1.NW_012116221v1 877259 12 + 2368649 GCTCTGCTTAGT i colAng1.NW_012116221v1 T 113 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=-435.000000 s hg38.chr4_KI270789v1_alt 105832 2 + 205944 TA s panTro5.chr4 192895056 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 2 + 115148730 TA i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987198 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929967 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350938 1 + 4669795 T- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308982 2 + 135778131 TA i chlSab2.chr7 C 0 I 112 s manLeu1.NW_012102221v1 2761698 1 - 2847728 T- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877271 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094596 2 - 14256875 TG i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=91530.000000 s hg38.chr4_KI270789v1_alt 105834 18 + 205944 ATCTGTGTGACTCAGCAT s panTro5.chr4 192895058 18 + 194502333 ATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815953 18 + 4876863 ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704861 18 + 115148730 ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987200 18 + 190429646 ATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929969 18 + 189454096 ATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350939 18 + 4669795 ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309096 18 + 135778131 ATCTGTGTGACTCAGCAT i chlSab2.chr7 I 112 C 0 s manLeu1.NW_012102221v1 2761699 18 - 2847728 ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 -TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13094598 18 - 14256875 ATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 55 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1560.000000 s hg38.chr4_KI270789v1_alt 105852 1 + 205944 G s panTro5.chr4 192895076 1 + 194502333 G i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 55 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 55 - 14256875 T e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=49592.000000 s hg38.chr4_KI270789v1_alt 105853 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704880 10 + 115148730 GGGCGACGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350958 10 + 4669795 GGGAAATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309115 10 + 135778131 GGGAGATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605699 10 - 190850796 GGGAGACGAT i calJac3.chr3 T 55 C 0 s saiBol1.JH378165 13094561 10 - 14256875 GGGAGAGGAT i saiBol1.JH378165 T 55 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e macNem1.NW_012013133v1 24321735 170 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=90644.000000 s hg38.chr4_KI270789v1_alt 105863 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987229 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187929998 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 T 114 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 170 C 0 s cerAty1.NW_012001672v1 3350968 14 + 4669795 AGGCAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309125 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761728 14 - 2847728 AGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877301 14 + 2368649 AGGCAAAATCGGGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605709 13 - 190850796 -GGGGAAATCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094571 13 - 14256875 -GGGGAAATCAGGG i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=64920.000000 s hg38.chr4_KI270789v1_alt 105877 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815996 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 12 + 115148730 TCTCCGTTTAGT i nomLeu3.chr7b C 0 T 57 s rheMac8.chr5 188987129 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187929898 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 T 114 C 0 s macNem1.NW_012013133v1 24321579 12 - 25927173 GCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 12 + 4669795 GCTCTGTTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 12 + 135778131 GCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761742 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 12 + 2368649 GCTCTGTTGAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605722 12 - 190850796 GCTCTGTTTAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094584 12 - 14256875 GCTCTGTTTAGT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=140727.000000 s hg38.chr4_KI270789v1_alt 105889 20 + 205944 TAATCTGTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 20 + 4876863 TAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 57 C 0 s rheMac8.chr5 188987141 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929910 20 + 189454096 TAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 20 - 25927173 TAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350994 20 + 4669795 TAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309151 20 + 135778131 TAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761754 20 - 2847728 TAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877327 20 + 2368649 TAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605734 20 - 190850796 TCATCTGTGTGACTCAGCAT i calJac3.chr3 C 0 T 38 s saiBol1.JH378165 13094596 20 - 14256875 TGATCTGTGTGACTCAGCAT i saiBol1.JH378165 C 0 T 18 e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=235857.000000 s hg38.chr4_KI270789v1_alt 105909 56 + 205944 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704879 56 + 115148730 AGGGCGACGACAGGGAAAATCAGGG----TCTCCGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 57 + 190429646 AGGGAGATGACAGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 57 + 189454096 AGGGAGATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 56 - 25927173 AAGGAGATGACAGGGAAAATCAGCG----GCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 60 + 4669795 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 T 117 s chlSab2.chr7 134309058 56 + 135778131 AAGGAGATGACAGGGAAAATCAACG----GCTCTGCTTAGTT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761774 60 - 2847728 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 T 117 s colAng1.NW_012116221v1 877347 60 + 2368649 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 T 117 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=237043.000000 s hg38.chr4_KI270789v1_alt 105965 56 + 205944 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTGTAGTT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895076 56 + 194502333 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i panTro5.chr4 T 56 T 112 s gorGor5.CYUI01015356v1 3816028 56 + 4876863 AGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 56 T 169 s nomLeu3.chr7b 112704935 56 + 115148730 AGGGAGATGATAGGGAAAATCAGGG----TCTCTGTTTAGTT-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 60 + 190429646 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCAGTGTGACTCAGCAT i rheMac8.chr5 C 0 T 117 s macFas5.chr5 187929987 60 + 189454096 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTT-ATCAGTGTGACTCAGCAT i macFas5.chr5 C 0 T 117 s macNem1.NW_012013133v1 24321667 57 - 25927173 AGGGAGATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 57 + 4669795 AGGGAAATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 117 C 0 s chlSab2.chr7 134309114 57 + 135778131 AGGGAGATGACAGGGAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 132 s manLeu1.NW_012102221v1 2761717 57 - 2847728 AGGGAGATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 117 C 0 s colAng1.NW_012116221v1 877290 57 + 2368649 AGGGAGATGACAGGCAAAATCGGGG----GCTCTGTTGAGTTAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 117 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1694.000000 s hg38.chr4_KI270789v1_alt 106021 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 1 + 190429646 A i rheMac8.chr5 T 117 C 0 s macFas5.chr5 187929930 1 + 189454096 A i macFas5.chr5 T 117 C 0 s macNem1.NW_012013133v1 24321724 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e chlSab2.chr7 134309171 132 + 135778131 T e gorGor5.CYUI01015356v1 3816084 169 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=90411.000000 s hg38.chr4_KI270789v1_alt 106022 24 + 205944 GGGAGATGATAGGGAAAATCAGGG s panTro5.chr4 192895020 24 + 194502333 GGGAGATGATAGGGAAAATCAGGG i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 24 + 4876863 GGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 169 C 0 s nomLeu3.chr7b 112704992 24 + 115148730 GGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 24 + 190429646 GGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 24 + 189454096 GGGAGATGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 22 - 25927173 GGGAGATGACGG--AAAATCAGGG i macNem1.NW_012013133v1 C 0 T 182 s cerAty1.NW_012001672v1 3351015 24 + 4669795 GGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 57 s manLeu1.NW_012102221v1 2761775 24 - 2847728 GGGAGATGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 44 s colAng1.NW_012116221v1 877348 24 + 2368649 GGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 57 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e chlSab2.chr7 134309171 132 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=12613.000000 s hg38.chr4_KI270789v1_alt 106046 9 + 205944 TCTCTGTGT s panTro5.chr4 192895044 9 + 194502333 TCTCTGTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 9 + 4876863 TCTCTGTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 9 + 115148730 TGTCTGTTT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987186 9 + 190429646 GCTCTGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 9 + 189454096 GCTCTGTTG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350982 9 + 4669795 GCTCTGTTG i cerAty1.NW_012001672v1 T 57 C 0 s colAng1.NW_012116221v1 877315 9 + 2368649 GCTCTGTTG i colAng1.NW_012116221v1 T 57 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e manLeu1.NW_012102221v1 2761799 44 - 2847728 T e chlSab2.chr7 134309171 132 + 135778131 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=10444.000000 s hg38.chr4_KI270789v1_alt 106055 4 + 205944 AGTT s panTro5.chr4 192895053 4 + 194502333 AGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815948 4 + 4876863 AGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704969 4 + 115148730 AGTT i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987195 4 + 190429646 AGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929964 4 + 189454096 AGTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350991 4 + 4669795 AGTT i cerAty1.NW_012001672v1 C 0 C 0 s colAng1.NW_012116221v1 877324 4 + 2368649 AGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e manLeu1.NW_012102221v1 2761799 44 - 2847728 T e chlSab2.chr7 134309171 132 + 135778131 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=76177.000000 s hg38.chr4_KI270789v1_alt 106059 20 + 205944 AATCTCTGTGACTCAGCATG s panTro5.chr4 192895057 20 + 194502333 AATCTGTGTGATTCAGCATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815952 20 + 4876863 AATCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704973 19 + 115148730 -ATCTGTGTGACTCAGCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987199 20 + 190429646 AATCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929968 20 + 189454096 AATCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350995 20 + 4669795 AATCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309039 20 + 135778131 AATCTATGCGACTCAGCATA i chlSab2.chr7 T 132 C 0 s manLeu1.NW_012102221v1 2761755 20 - 2847728 AATCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 T 44 C 0 s colAng1.NW_012116221v1 877328 20 + 2368649 AATCTGTGTGACTCAGCATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=93429.000000 s hg38.chr4_KI270789v1_alt 106079 24 + 205944 GGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895077 24 + 194502333 GGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815915 24 + 4876863 GGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704992 24 + 115148730 GGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 24 + 190429646 GGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 57 s macFas5.chr5 187929988 24 + 189454096 GGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 57 s cerAty1.NW_012001672v1 3351015 24 + 4669795 GGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 184 s chlSab2.chr7 134309059 24 + 135778131 AGGAGATGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761775 24 - 2847728 GGGAGATGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 100 s colAng1.NW_012116221v1 877348 24 + 2368649 GGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 184 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=17002.000000 s hg38.chr4_KI270789v1_alt 106103 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 T 94 s gorGor5.CYUI01015356v1 3815939 13 + 4876863 TCTCTGTGTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705016 13 + 115148730 TGTCTGTTTAGTT i nomLeu3.chr7b C 0 T 111 s rheMac8.chr5 188987186 13 + 190429646 GCTCTGTTGAGTT i rheMac8.chr5 T 57 C 0 s macFas5.chr5 187929955 13 + 189454096 GCTCTGTTGAGTT i macFas5.chr5 T 57 C 0 s chlSab2.chr7 134309083 13 + 135778131 GCTCTGCTTAGTT i chlSab2.chr7 C 0 T 112 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 100 - 2847728 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=546.000000 s hg38.chr4_KI270789v1_alt 106116 1 + 205944 A s gorGor5.CYUI01015356v1 3815952 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987199 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929968 1 + 189454096 A i macFas5.chr5 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e manLeu1.NW_012102221v1 2761799 100 - 2847728 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e nomLeu3.chr7b 112705029 111 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895114 94 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=910.000000 s hg38.chr4_KI270789v1_alt 106117 1 + 205944 A s gorGor5.CYUI01015356v1 3815953 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987200 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929969 1 + 189454096 A i macFas5.chr5 C 0 C 0 s manLeu1.NW_012102221v1 2761699 1 - 2847728 A i manLeu1.NW_012102221v1 T 100 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e nomLeu3.chr7b 112705029 111 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895114 94 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=23558.000000 s hg38.chr4_KI270789v1_alt 106118 18 + 205944 TCTCTGTGACTCAGCATG s gorGor5.CYUI01015356v1 3815954 18 + 4876863 TCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 T 57 s nomLeu3.chr7b 112704918 18 + 115148730 TCTGTGTGACTCAGCATA i nomLeu3.chr7b T 111 C 0 s rheMac8.chr5 188987201 18 + 190429646 TCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929970 18 + 189454096 TCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s manLeu1.NW_012102221v1 2761700 18 - 2847728 TCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895114 94 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=44134.000000 s hg38.chr4_KI270789v1_alt 106136 24 + 205944 GGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895020 24 + 194502333 GGGAGATGATAGGGAAAATCAGGG i panTro5.chr4 T 94 C 0 s gorGor5.CYUI01015356v1 3815915 24 + 4876863 GGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 57 C 0 s nomLeu3.chr7b 112704936 24 + 115148730 GGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987219 24 + 190429646 GGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187929988 24 + 189454096 GGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 156 s manLeu1.NW_012102221v1 2761718 24 - 2847728 GGGAGATGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=11840.000000 s hg38.chr4_KI270789v1_alt 106160 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815939 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704960 12 + 115148730 TCTCTGTTTAGT i nomLeu3.chr7b C 0 T 54 s rheMac8.chr5 188987129 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 T 114 C 0 s manLeu1.NW_012102221v1 2761742 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e macFas5.chr5 187930012 156 + 189454096 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2730.000000 s hg38.chr4_KI270789v1_alt 106172 3 + 205944 TAA s panTro5.chr4 192895056 3 + 194502333 TAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815951 3 + 4876863 TAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987141 3 + 190429646 TAA i rheMac8.chr5 C 0 C 0 s manLeu1.NW_012102221v1 2761754 3 - 2847728 TAA i manLeu1.NW_012102221v1 C 0 T 170 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e chlSab2.chr7 134309096 112 + 135778131 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e macFas5.chr5 187930012 156 + 189454096 T e nomLeu3.chr7b 112704972 54 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=45160.000000 s hg38.chr4_KI270789v1_alt 106175 18 + 205944 TCTGTGTGACTCAGCATG s panTro5.chr4 192895059 18 + 194502333 TCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815954 18 + 4876863 TCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704918 18 + 115148730 TCTGTGTGACTCAGCATA i nomLeu3.chr7b T 54 C 0 s rheMac8.chr5 188987144 18 + 190429646 TCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 18 + 189454096 TCTGTGTGACTCAGCATA i macFas5.chr5 T 156 C 0 s chlSab2.chr7 134308984 18 + 135778131 TCTGTGTGACTCAGCATA i chlSab2.chr7 T 112 C 0 s manLeu1.NW_012102221v1 2761587 18 - 2847728 TCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 T 170 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=22470.000000 s hg38.chr4_KI270789v1_alt 106193 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309002 10 + 135778131 GGGAAATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 184 + 2368649 T e cerAty1.NW_012001672v1 3351039 184 + 4669795 T e macNem1.NW_012013133v1 24321747 182 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=114180.000000 s hg38.chr4_KI270789v1_alt 106203 26 + 205944 AGGGAAAATCAGGGTCTCTGTGTAGT s panTro5.chr4 192895030 26 + 194502333 AGGGAAAATCAGGGTCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 26 + 4876863 AGGGAAAATCAGGGTCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704946 26 + 115148730 AGGGAAAATCAGGGTCTCTGTTTAGT i nomLeu3.chr7b C 0 T 113 s rheMac8.chr5 188987172 26 + 190429646 AGGGAAAATCAGGGGCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929884 26 + 189454096 AGGCAAAATCAGGGGCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 26 - 25927173 AGGGAAAATCAGGGGCTCTGTTGAGT i macNem1.NW_012013133v1 T 182 C 0 s cerAty1.NW_012001672v1 3350855 26 + 4669795 AGGGAAAATCAGGGGCTCTGTTGAGT i cerAty1.NW_012001672v1 T 184 C 0 s chlSab2.chr7 134309012 26 + 135778131 AGGCAAAATCAGGGGCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761615 26 - 2847728 AGGCAAAATCAGGGGCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877188 26 + 2368649 AGGGAAAATCAGGGGCTCTGTTGAGT i colAng1.NW_012116221v1 T 184 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=199519.000000 s hg38.chr4_KI270789v1_alt 106229 45 + 205944 TAATCTCTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895056 45 + 194502333 TAATCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 45 + 4876863 TAATCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 45 + 115148730 TAATCTGTGTGACTCAGCATAGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b T 113 C 0 s rheMac8.chr5 188987198 45 + 190429646 TAATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 212 s macFas5.chr5 187929910 45 + 189454096 TAATCTGTGTGACTCAGCATAGGGAGATGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 45 - 25927173 TAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350881 45 + 4669795 TAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309038 45 + 135778131 TAATCTATGCGACTCAGCATAAGGAGATGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 45 - 2847728 TAATCTACGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877214 45 + 2368649 TAATCCGTGTGACTCAGCATCAGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=34132.000000 s hg38.chr4_KI270789v1_alt 106274 11 + 205944 TCTCTGTGTAG s panTro5.chr4 192895101 11 + 194502333 TCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 11 + 4876863 TCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 11 + 115148730 TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s macFas5.chr5 187929955 11 + 189454096 GCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321636 11 - 25927173 GCTCTGCTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350926 11 + 4669795 GCTCTGCTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309083 11 + 135778131 GCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 11 - 2847728 GCTCTGCTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877259 11 + 2368649 GCTCTGCTTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=6489.000000 s hg38.chr4_KI270789v1_alt 106285 3 + 205944 TT-A s panTro5.chr4 192895112 3 + 194502333 TT-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816064 3 + 4876863 TT-A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 3 + 115148730 TA-A i nomLeu3.chr7b T 56 C 0 s macFas5.chr5 187929966 4 + 189454096 TTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321647 3 - 25927173 TT-A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350937 3 + 4669795 TT-A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309094 3 + 135778131 TT-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761697 3 - 2847728 TT-A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877270 3 + 2368649 TT-A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89045.000000 s hg38.chr4_KI270789v1_alt 106288 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704862 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 T 212 C 0 s macFas5.chr5 187929970 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309097 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761700 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=106391.000000 s hg38.chr4_KI270789v1_alt 106305 25 + 205944 GGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895076 25 + 194502333 GGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 25 + 4876863 AGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 25 + 115148730 AGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 25 + 190429646 AAGGAGATGACAGGGAAAATCTGCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 25 + 189454096 AGGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 212 s macNem1.NW_012013133v1 24321667 25 - 25927173 AGGGAGATGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 25 + 4669795 AGGGAAATGACAGGCAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 25 + 135778131 AGGGAGATGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 25 - 2847728 AGGGAGATGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 25 + 2368649 AGGGAGATGACAGGCAAAATCGGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=32804.000000 s hg38.chr4_KI270789v1_alt 106330 11 + 205944 TCTCTGTGTAG s panTro5.chr4 192895101 11 + 194502333 TCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 11 + 4876863 TCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 11 + 115148730 TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987073 11 + 190429646 GCTCTGCTTAG i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321692 11 - 25927173 GCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 11 + 4669795 GCTCTGTTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 11 + 135778131 GCTCTGTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761742 11 - 2847728 GCTCTGTTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 11 + 2368649 GCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macFas5.chr5 187930012 212 + 189454096 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=11196.000000 s hg38.chr4_KI270789v1_alt 106341 3 + 205944 TTA s panTro5.chr4 192895112 3 + 194502333 TTA i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816064 3 + 4876863 TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 2 + 115148730 -TA i nomLeu3.chr7b T 56 I 1 s rheMac8.chr5 188987084 3 + 190429646 TTA i rheMac8.chr5 C 0 T 56 s macNem1.NW_012013133v1 24321703 3 - 25927173 TTA i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3350993 3 + 4669795 TTA i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134309150 3 + 135778131 TTA i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2761753 3 - 2847728 TTA i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 877326 3 + 2368649 TTA i colAng1.NW_012116221v1 C 0 I 1 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macFas5.chr5 187930012 212 + 189454096 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=87735.000000 s hg38.chr4_KI270789v1_alt 106344 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704862 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 188987031 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 T 56 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 T 212 C 0 s macNem1.NW_012013133v1 24321707 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3350997 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134309154 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 I 1 T 131 s manLeu1.NW_012102221v1 2761757 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 877330 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 I 1 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=24392.000000 s hg38.chr4_KI270789v1_alt 106361 7 + 205944 GGGGAGA s panTro5.chr4 192895076 7 + 194502333 GGGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 7 + 4876863 AGGGAGA i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 7 + 115148730 AGGGCGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 7 + 190429646 AAGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 7 + 189454096 AAGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321724 7 - 25927173 AGGGAGA i macNem1.NW_012013133v1 C 0 T 57 s cerAty1.NW_012001672v1 3351014 7 + 4669795 AGGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2761774 7 - 2847728 AGGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877347 7 + 2368649 AGGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e chlSab2.chr7 134309171 131 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=64152.000000 s hg38.chr4_KI270789v1_alt 106368 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895083 18 + 194502333 CGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816035 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 18 + 115148730 CGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987055 18 + 190429646 TGACAGGGAAAATCTGCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929824 18 + 189454096 TGACAGGGAAAATCAGCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321674 18 - 25927173 TGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 T 57 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 155 s manLeu1.NW_012102221v1 2761781 18 - 2847728 TGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 156 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 155 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e chlSab2.chr7 134309171 131 + 135778131 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=18763.000000 s hg38.chr4_KI270789v1_alt 106386 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 13 + 4876863 TCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 13 + 115148730 TCTCCGTTTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987073 13 + 190429646 GCTCTGCTTAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929842 13 + 189454096 GCTCTGCTTAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321692 13 - 25927173 GCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 I 1 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 155 + 2368649 T e manLeu1.NW_012102221v1 2761799 156 - 2847728 T e chlSab2.chr7 134309171 131 + 135778131 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=3276.000000 s hg38.chr4_KI270789v1_alt 106399 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704917 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987086 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929855 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321706 1 - 25927173 A i macNem1.NW_012013133v1 I 1 C 0 s chlSab2.chr7 134309040 1 + 135778131 A i chlSab2.chr7 T 131 C 0 s manLeu1.NW_012102221v1 2761643 1 - 2847728 A i manLeu1.NW_012102221v1 T 156 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 155 + 2368649 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=109766.000000 s hg38.chr4_KI270789v1_alt 106400 24 + 205944 TCTGTGTGACTCAGCATGGGGAGA s panTro5.chr4 192895059 24 + 194502333 TCTGTGTGATTCAGCATGGGGAGA i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816011 24 + 4876863 TCTGTGTGACTCAGCACAGGGAGA i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704918 24 + 115148730 TCTGTGTGACTCAGCATAGGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987087 24 + 190429646 TCTGTGTGACTCAGCATAGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 24 + 189454096 TCTGTGTGACTCAGCATAGGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321707 24 - 25927173 TCTGTGTGACTCAGCATAGGGAGA i macNem1.NW_012013133v1 C 0 T 137 s cerAty1.NW_012001672v1 3350884 24 + 4669795 TCTGTGTGACTCAGCATAAGGAGA i cerAty1.NW_012001672v1 T 155 C 0 s chlSab2.chr7 134309041 24 + 135778131 TCTATGCGACTCAGCATAAGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761644 24 - 2847728 TCTACGTGACTCAGCATAAGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877217 24 + 2368649 TCCGTGTGACTCAGCATCAGGAGA i colAng1.NW_012116221v1 T 155 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=109418.000000 s hg38.chr4_KI270789v1_alt 106424 32 + 205944 CGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895083 32 + 194502333 CGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816035 32 + 4876863 CGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704942 32 + 115148730 TGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987111 32 + 190429646 TGACAGGCAAAATCAGGGGCTCTGTTGAGTTA i rheMac8.chr5 C 0 T 112 s macFas5.chr5 187929880 32 + 189454096 TGACAGGCAAAATCAGGGGCTCTGTTGAGTTA i macFas5.chr5 C 0 T 112 s cerAty1.NW_012001672v1 3350908 32 + 4669795 TGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 C 0 T 56 s chlSab2.chr7 134309065 32 + 135778131 TGACAGGGAAAATCAACGGCTCTGCTTAGTTA i chlSab2.chr7 C 0 T 169 s manLeu1.NW_012102221v1 2761668 32 - 2847728 TGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 C 0 T 56 s colAng1.NW_012116221v1 877241 32 + 2368649 TGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 C 0 T 56 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 137 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=250362.000000 s hg38.chr4_KI270789v1_alt 106456 56 + 205944 TCTGTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895059 56 + 194502333 TCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816011 56 + 4876863 TCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 T 56 T 152 s nomLeu3.chr7b 112704974 56 + 115148730 TCTGTGTGACTCAGCATAGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 56 + 190429646 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTA i rheMac8.chr5 T 112 C 0 s macFas5.chr5 187929800 56 + 189454096 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macFas5.chr5 T 112 C 0 s macNem1.NW_012013133v1 24321594 56 - 25927173 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macNem1.NW_012013133v1 T 137 C 0 s cerAty1.NW_012001672v1 3350884 56 + 4669795 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308928 56 + 135778131 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i chlSab2.chr7 T 169 C 0 s manLeu1.NW_012102221v1 2761644 56 - 2847728 TCTACGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 T 56 C 0 s colAng1.NW_012116221v1 877217 56 + 2368649 TCCGTGTGACTCAGCATCAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 T 56 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71676.000000 s hg38.chr4_KI270789v1_alt 106512 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s nomLeu3.chr7b 112705030 17 + 115148730 TTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761700 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e gorGor5.CYUI01015356v1 3816067 152 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2300.000000 s hg38.chr4_KI270789v1_alt 106529 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e gorGor5.CYUI01015356v1 3816067 152 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=159559.000000 s hg38.chr4_KI270789v1_alt 106530 37 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT s panTro5.chr4 192895020 37 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 37 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT i gorGor5.CYUI01015356v1 T 152 C 0 s nomLeu3.chr7b 112704992 37 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTT i nomLeu3.chr7b C 0 T 111 s rheMac8.chr5 188987105 37 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 37 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 37 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 37 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 37 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761718 37 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 37 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=8190.000000 s hg38.chr4_KI270789v1_alt 106567 2 + 205944 AA s panTro5.chr4 192895057 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815952 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987142 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929911 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321705 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350995 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309039 2 + 135778131 AA i chlSab2.chr7 C 0 T 57 s manLeu1.NW_012102221v1 2761755 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 T 170 s colAng1.NW_012116221v1 877328 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e nomLeu3.chr7b 112705029 111 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89839.000000 s hg38.chr4_KI270789v1_alt 106569 18 + 205944 TCTGTGTGACTCAGCATG s panTro5.chr4 192895059 18 + 194502333 TCTGTGTGATTCAGCATG i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815954 18 + 4876863 TCTGTGTGACTCAGCATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704918 18 + 115148730 TCTGTGTGACTCAGCATA i nomLeu3.chr7b T 111 C 0 s rheMac8.chr5 188987144 18 + 190429646 TCTGTGTGACTCAGCATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929913 18 + 189454096 TCTGTGTGACTCAGCATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321707 18 - 25927173 TCTGTGTGACTCAGCATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350997 18 + 4669795 TCTGTGTGACTCAGCATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 18 + 135778131 TCTGTGTGACTCAGCATA i chlSab2.chr7 T 57 C 0 s manLeu1.NW_012102221v1 2761587 18 - 2847728 TCTGTGTGACTCAGCATA i manLeu1.NW_012102221v1 T 170 C 0 s colAng1.NW_012116221v1 877330 18 + 2368649 TCTGTGTGACTCAGCATA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=30700.000000 s hg38.chr4_KI270789v1_alt 106587 6 + 205944 GGGAGA s panTro5.chr4 192895020 6 + 194502333 GGGAGA i panTro5.chr4 T 57 C 0 s gorGor5.CYUI01015356v1 3815972 6 + 4876863 GGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 6 + 115148730 GGGAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987162 6 + 190429646 GGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929931 6 + 189454096 GGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321725 6 - 25927173 GGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3351015 6 + 4669795 GGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 6 + 135778131 GGGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 6 - 2847728 GGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877348 6 + 2368649 GGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=12049.000000 s hg38.chr4_KI270789v1_alt 106593 4 + 205944 CGAT s panTro5.chr4 192895026 4 + 194502333 TGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815978 4 + 4876863 CGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704942 4 + 115148730 TGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 4 + 190429646 TGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 4 + 189454096 TGAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 4 + 4669795 TGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309008 4 + 135778131 TGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761611 4 - 2847728 TGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 4 + 2368649 TGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=68135.000000 s hg38.chr4_KI270789v1_alt 106597 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704946 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987172 14 + 190429646 AGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929941 14 + 189454096 AGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3351025 14 + 4669795 AGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 155 s chlSab2.chr7 134309012 14 + 135778131 AGGCAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761615 14 - 2847728 AGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877358 14 + 2368649 AGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 155 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=28925.000000 s hg38.chr4_KI270789v1_alt 106611 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815996 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704960 12 + 115148730 TCTCTGTTTAGT i nomLeu3.chr7b C 0 T 113 s rheMac8.chr5 188987186 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321579 12 - 25927173 GCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309026 12 + 135778131 GCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761629 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 155 + 2368649 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=131296.000000 s hg38.chr4_KI270789v1_alt 106623 45 + 205944 TAATCTCTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895056 45 + 194502333 TAATCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 45 + 4876863 TAATCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 45 + 115148730 TAATCTGTGTGACTCAGCATAGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b T 113 C 0 s rheMac8.chr5 188987198 45 + 190429646 TAATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 212 s macFas5.chr5 187929967 45 + 189454096 TAATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 57 s macNem1.NW_012013133v1 24321591 45 - 25927173 TAATCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309038 45 + 135778131 TAATCTATGCGACTCAGCATAAGGAGATGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 45 - 2847728 TAATCTACGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 155 + 2368649 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=24917.000000 s hg38.chr4_KI270789v1_alt 106668 14 + 205944 TCTCTGTGTAGTT-A s panTro5.chr4 192895101 14 + 194502333 TCTCTGTTTAGTT-A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 14 + 4876863 TCTCTGTTTAGTT-A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 14 + 115148730 TCTCCGTTTAGTT-A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929955 15 + 189454096 GCTCTGTTGAGTTAA i macFas5.chr5 T 57 C 0 s macNem1.NW_012013133v1 24321636 14 - 25927173 GCTCTGCTTAGTT-A i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309083 14 + 135778131 GCTCTGCTTAGTT-A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 14 - 2847728 GCTCTGCTTAGTT-A i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877372 155 + 2368649 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71757.000000 s hg38.chr4_KI270789v1_alt 106682 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704918 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929970 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 155 C 0 s chlSab2.chr7 134309097 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761700 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877217 17 + 2368649 TCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 155 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=92636.000000 s hg38.chr4_KI270789v1_alt 106699 25 + 205944 GGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895076 25 + 194502333 GGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 25 + 4876863 AGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704935 25 + 115148730 AGGGAGATGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929987 25 + 189454096 AGGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 212 s macNem1.NW_012013133v1 24321667 25 - 25927173 AGGGAGATGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 25 + 4669795 AAGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 25 + 135778131 AGGGAGATGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 25 - 2847728 AGGGAGATGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 25 + 2368649 CAGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=32872.000000 s hg38.chr4_KI270789v1_alt 106724 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 13 + 4876863 TCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704960 13 + 115148730 TCTCTGTTTAGTT i nomLeu3.chr7b C 0 C 0 s macNem1.NW_012013133v1 24321692 13 - 25927173 GCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 T 111 s cerAty1.NW_012001672v1 3350926 13 + 4669795 GCTCTGCTTAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 13 + 135778131 GCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761742 13 - 2847728 GCTCTGTTGAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877259 13 + 2368649 GCTCTGCTTAGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macFas5.chr5 187930012 212 + 189454096 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2548.000000 s hg38.chr4_KI270789v1_alt 106737 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704973 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3350939 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 T 56 s chlSab2.chr7 134309152 1 + 135778131 A i chlSab2.chr7 C 0 T 225 s manLeu1.NW_012102221v1 2761755 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 T 225 s colAng1.NW_012116221v1 877272 1 + 2368649 A i colAng1.NW_012116221v1 C 0 T 56 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e macFas5.chr5 187930012 212 + 189454096 T e rheMac8.chr5 188987243 212 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=86515.000000 s hg38.chr4_KI270789v1_alt 106738 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704974 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 T 212 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 T 212 C 0 s macNem1.NW_012013133v1 24321594 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 111 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308928 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 T 225 C 0 s manLeu1.NW_012102221v1 2761531 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 T 225 C 0 s colAng1.NW_012116221v1 877217 17 + 2368649 TCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 56 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=166447.000000 s hg38.chr4_KI270789v1_alt 106755 39 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895076 39 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 39 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 T 56 T 113 s nomLeu3.chr7b 112704991 39 + 115148730 AGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 39 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 39 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 39 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 39 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 39 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 39 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 39 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=87735.000000 s hg38.chr4_KI270789v1_alt 106794 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815954 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 113 C 0 s nomLeu3.chr7b 112705030 17 + 115148730 TTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761587 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2152.000000 s hg38.chr4_KI270789v1_alt 106811 1 + 205944 G s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=154554.000000 s hg38.chr4_KI270789v1_alt 106812 36 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGT s panTro5.chr4 192895020 36 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815972 36 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704992 36 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987105 36 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 36 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 36 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 36 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 36 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 36 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 36 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=140106.000000 s hg38.chr4_KI270789v1_alt 106848 31 + 205944 TAATCTCTGTGACTCAGCATGGGGAGATGAT s panTro5.chr4 192895056 31 + 194502333 TAATCTGTGTGATTCAGCATGGGGAGACGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 31 + 4876863 TAATCTGTGTGACTCAGCACAGGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 31 + 115148730 TAATCTGTGTGACTCAGCATAGGGCGACGAC i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987141 31 + 190429646 TAATCTGTGTGACTCAGCATAGGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929910 31 + 189454096 TAATCTGTGTGACTCAGCATAGGGAGATGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321704 31 - 25927173 TAATCTGTGTGACTCAGCATAGGGAGATGAC i macNem1.NW_012013133v1 C 0 T 113 s cerAty1.NW_012001672v1 3350994 31 + 4669795 TAATCTGTGTGACTCAGCATAGGGAGATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309038 31 + 135778131 TAATCTATGCGACTCAGCATAAGGAGATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761641 31 - 2847728 TAATCTACGTGACTCAGCATAAGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877327 31 + 2368649 TAATCTGTGTGACTCAGCATAGGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=95224.000000 s hg38.chr4_KI270789v1_alt 106879 25 + 205944 AGGGAAAATCAGGG----TCTCTGTGTAG s panTro5.chr4 192895087 25 + 194502333 AGGGAAAATCAGGG----TCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816039 25 + 4876863 AGGGAAAATCAGGG----TCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704890 25 + 115148730 AGGGAAAATCAGGG----TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987172 25 + 190429646 AGGGAAAATCAGGG----GCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929941 25 + 189454096 AGGCAAAATCAGGG----GCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321622 25 - 25927173 AGGGAAAATCAGCG----GCTCTGCTTAG i macNem1.NW_012013133v1 T 113 C 0 s cerAty1.NW_012001672v1 3351025 29 + 4669795 AGGGAAAATCAGGGGCTTGCTCTGTTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309069 25 + 135778131 AGGGAAAATCAACG----GCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761672 25 - 2847728 AGGGAAAATCAGCG----GCTCTGCTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877358 29 + 2368649 AGGGAAAATCAGGGGCTTGCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=94271.000000 s hg38.chr4_KI270789v1_alt 106904 20 + 205944 TT-ATCTGTGTGACTCAGCAT s panTro5.chr4 192895112 20 + 194502333 TT-ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816064 20 + 4876863 TT-ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704859 20 + 115148730 TA-ATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987197 21 + 190429646 TTAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929966 21 + 189454096 TTAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321647 20 - 25927173 TT-ATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351054 20 + 4669795 TT-ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 T 190 s chlSab2.chr7 134309094 20 + 135778131 TT-ATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761697 20 - 2847728 TT-ATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877387 20 + 2368649 TT-ATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 T 190 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=74852.000000 s hg38.chr4_KI270789v1_alt 106924 25 + 205944 GGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895076 25 + 194502333 GGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 25 + 4876863 AGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 25 + 115148730 AGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987218 25 + 190429646 AGGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 T 170 s macFas5.chr5 187929987 25 + 189454096 AGGGAGATGACAGGGAAAATCAGGG i macFas5.chr5 C 0 T 170 s macNem1.NW_012013133v1 24321667 25 - 25927173 AGGGAGATGACAGGCAAAATCAGGG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309114 25 + 135778131 AGGGAGATGACAGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 25 - 2847728 AGGGAGATGACAGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 190 + 2368649 T e cerAty1.NW_012001672v1 3351074 190 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=31896.000000 s hg38.chr4_KI270789v1_alt 106949 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 13 + 4876863 TCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 13 + 115148730 TCTCCGTTTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987073 13 + 190429646 GCTCTGCTTAGTT i rheMac8.chr5 T 170 C 0 s macFas5.chr5 187929842 13 + 189454096 GCTCTGCTTAGTT i macFas5.chr5 T 170 C 0 s macNem1.NW_012013133v1 24321692 13 - 25927173 GCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 T 111 s chlSab2.chr7 134309139 13 + 135778131 GCTCTGTTGAGTT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2761742 13 - 2847728 GCTCTGTTGAGTT i manLeu1.NW_012102221v1 C 0 I 1 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 190 + 2368649 T e cerAty1.NW_012001672v1 3351074 190 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2548.000000 s hg38.chr4_KI270789v1_alt 106962 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704917 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987086 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929855 1 + 189454096 A i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309153 1 + 135778131 A i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2761756 1 - 2847728 A i manLeu1.NW_012102221v1 I 1 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 190 + 2368649 T e cerAty1.NW_012001672v1 3351074 190 + 4669795 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=70578.000000 s hg38.chr4_KI270789v1_alt 106963 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704918 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 190 C 0 s chlSab2.chr7 134309154 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 243 s manLeu1.NW_012102221v1 2761757 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877217 17 + 2368649 TCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 190 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=105147.000000 s hg38.chr4_KI270789v1_alt 106980 39 + 205944 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTGTAGTTA s panTro5.chr4 192895076 39 + 194502333 GGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTTA i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816028 39 + 4876863 AGGGAGACGATAGGGAAAATCAGGG----TCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 T 56 T 56 s nomLeu3.chr7b 112704935 39 + 115148730 AGGGAGATGATAGGGAAAATCAGGG----TCTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 39 + 190429646 AGGGAGATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTA i rheMac8.chr5 C 0 T 112 s macFas5.chr5 187929873 39 + 189454096 AGGGAGATGACAGGCAAAATCAGGG----GCTCTGTTGAGTTA i macFas5.chr5 C 0 T 112 s cerAty1.NW_012001672v1 3350901 39 + 4669795 AAGGAGATGACAGGGAAAATCAGGG----GCTCTGCTTAGTTA i cerAty1.NW_012001672v1 C 0 T 56 s manLeu1.NW_012102221v1 2761774 43 - 2847728 AGGGAGATGACAGGGAAAATCAGGGGCTTGCTCTGTTGAGTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877234 39 + 2368649 CAGGAGATGACAGGGAAAATCAGGG----GCTCTGCTTAGTTA i colAng1.NW_012116221v1 C 0 T 56 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e chlSab2.chr7 134309171 243 + 135778131 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=85295.000000 s hg38.chr4_KI270789v1_alt 107019 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895059 17 + 194502333 TCTGTGTGATTCAGCAT i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816011 17 + 4876863 TCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704974 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 T 112 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 T 112 C 0 s macNem1.NW_012013133v1 24321594 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 T 111 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308928 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 T 243 C 0 s manLeu1.NW_012102221v1 2761817 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 T 286 s colAng1.NW_012116221v1 877217 17 + 2368649 TCCGTGTGACTCAGCAT i colAng1.NW_012116221v1 T 56 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=166447.000000 s hg38.chr4_KI270789v1_alt 107036 39 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895076 39 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 39 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 C 0 T 113 s nomLeu3.chr7b 112704991 39 + 115148730 AGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987048 39 + 190429646 AAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929817 39 + 189454096 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 39 - 25927173 AAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 39 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308945 39 + 135778131 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761548 39 - 2847728 AAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 T 286 C 0 s colAng1.NW_012116221v1 877234 39 + 2368649 CAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=87735.000000 s hg38.chr4_KI270789v1_alt 107075 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815954 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 113 C 0 s nomLeu3.chr7b 112705030 17 + 115148730 TTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761587 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2152.000000 s hg38.chr4_KI270789v1_alt 107092 1 + 205944 G s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=159559.000000 s hg38.chr4_KI270789v1_alt 107093 37 + 205944 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT s panTro5.chr4 192895020 37 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815972 37 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704992 37 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTT i nomLeu3.chr7b C 0 T 169 s rheMac8.chr5 188987105 37 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 37 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 37 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 37 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 37 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 37 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 37 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=120163.000000 s hg38.chr4_KI270789v1_alt 107130 26 + 205944 AATCTCTGTGACTCAGCATGGGGAGA s panTro5.chr4 192895057 26 + 194502333 AATCTGTGTGATTCAGCATGGGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816009 26 + 4876863 AATCTGTGTGACTCAGCACAGGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704860 26 + 115148730 AATCTGTGTGACTCAGCATAGGGCGA i nomLeu3.chr7b T 169 C 0 s rheMac8.chr5 188987142 26 + 190429646 AATCTGTGTGACTCAGCATAGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929911 26 + 189454096 AATCTGTGTGACTCAGCATAGGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321705 26 - 25927173 AATCTGTGTGACTCAGCATAGGGAGA i macNem1.NW_012013133v1 C 0 T 166 s cerAty1.NW_012001672v1 3350995 26 + 4669795 AATCTGTGTGACTCAGCATAGGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309039 26 + 135778131 AATCTATGCGACTCAGCATAAGGAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761642 26 - 2847728 AATCTACGTGACTCAGCATAAGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877328 26 + 2368649 AATCTGTGTGACTCAGCATAGGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=64899.000000 s hg38.chr4_KI270789v1_alt 107156 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895083 18 + 194502333 CGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816035 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704886 18 + 115148730 CGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 18 + 189454096 TGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 113 s chlSab2.chr7 134309065 18 + 135778131 TGACAGGGAAAATCAACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 18 - 2847728 TGACAGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=40982.000000 s hg38.chr4_KI270789v1_alt 107174 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 13 + 4876863 TCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 13 + 115148730 TCTCCGTTTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987186 13 + 190429646 GCTCTGTTGAGTT i rheMac8.chr5 C 0 T 113 s macFas5.chr5 187929955 13 + 189454096 GCTCTGTTGAGTT i macFas5.chr5 C 0 I 1 s cerAty1.NW_012001672v1 3350926 13 + 4669795 GCTCTGCTTAGTT i cerAty1.NW_012001672v1 T 113 C 0 s chlSab2.chr7 134309083 13 + 135778131 GCTCTGCTTAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 13 - 2847728 GCTCTGCTTAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877259 13 + 2368649 GCTCTGCTTAGTT i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=4095.000000 s hg38.chr4_KI270789v1_alt 107187 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 T 113 s nomLeu3.chr7b 112704917 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987086 1 + 190429646 A i rheMac8.chr5 T 113 C 0 s macFas5.chr5 187929969 1 + 189454096 A i macFas5.chr5 I 1 C 0 s cerAty1.NW_012001672v1 3350939 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309096 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761699 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877272 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=72855.000000 s hg38.chr4_KI270789v1_alt 107188 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s gorGor5.CYUI01015356v1 3815954 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 T 113 C 0 s nomLeu3.chr7b 112704918 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929970 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309097 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761700 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1577.000000 s hg38.chr4_KI270789v1_alt 107205 1 + 205944 G s gorGor5.CYUI01015356v1 3815971 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704935 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929987 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=37060.000000 s hg38.chr4_KI270789v1_alt 107206 10 + 205944 GGGAGACGAT s panTro5.chr4 192895020 10 + 194502333 GGGAGATGAT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815972 10 + 4876863 GGGAGACGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704936 10 + 115148730 GGGAGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987105 10 + 190429646 GGGAGATGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929988 10 + 189454096 GGGAGATGAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350958 10 + 4669795 GGGAAATGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309115 10 + 135778131 GGGAGATGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761718 10 - 2847728 GGGAGATGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 10 + 2368649 GGGAGATGAC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 166 - 25927173 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=66015.000000 s hg38.chr4_KI270789v1_alt 107216 14 + 205944 AGGGAAAATCAGGG s panTro5.chr4 192895030 14 + 194502333 AGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815982 14 + 4876863 AGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704946 14 + 115148730 AGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987115 14 + 190429646 AGGCAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929998 14 + 189454096 AGGGAAAATCAGGG i macFas5.chr5 C 0 T 114 s macNem1.NW_012013133v1 24321565 14 - 25927173 AGGGAAAATCAGGG i macNem1.NW_012013133v1 T 166 C 0 s cerAty1.NW_012001672v1 3350968 14 + 4669795 AGGCAAAATCAGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309125 14 + 135778131 AGGGAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761728 14 - 2847728 AGGCAAAATCAGGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877301 14 + 2368649 AGGCAAAATCGGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=46045.000000 s hg38.chr4_KI270789v1_alt 107230 12 + 205944 TCTCTGTGTAGT s panTro5.chr4 192895044 12 + 194502333 TCTCTGTGTAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815996 12 + 4876863 TCTCTGTGTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704960 12 + 115148730 TCTCTGTTTAGT i nomLeu3.chr7b C 0 T 113 s rheMac8.chr5 188987129 12 + 190429646 GCTCTGTTGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929898 12 + 189454096 GCTCTGTTGAGT i macFas5.chr5 T 114 C 0 s macNem1.NW_012013133v1 24321579 12 - 25927173 GCTCTGTTGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350982 12 + 4669795 GCTCTGTTGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309139 12 + 135778131 GCTCTGTTGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761742 12 - 2847728 GCTCTGTTGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 12 + 2368649 GCTCTGTTGAGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=99280.000000 s hg38.chr4_KI270789v1_alt 107242 20 + 205944 TAATCTCTGTGACTCAGCAT s panTro5.chr4 192895056 20 + 194502333 TAATCTGTGTGATTCAGCAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816008 20 + 4876863 TAATCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 20 + 115148730 TAATCTGTGTGACTCAGCAT i nomLeu3.chr7b T 113 C 0 s rheMac8.chr5 188987141 20 + 190429646 TAATCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929910 20 + 189454096 TAATCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321591 20 - 25927173 TAATCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350994 20 + 4669795 TAATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309151 20 + 135778131 TAATCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 T 113 s manLeu1.NW_012102221v1 2761754 20 - 2847728 TAATCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877327 20 + 2368649 TAATCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=110813.000000 s hg38.chr4_KI270789v1_alt 107262 25 + 205944 GGGGAGACGATAGGGAAAATCAGGG s panTro5.chr4 192895076 25 + 194502333 GGGGAGACGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816028 25 + 4876863 AGGGAGACGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704879 25 + 115148730 AGGGCGACGACAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987161 25 + 190429646 AGGGAGATGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929930 25 + 189454096 AGGGAGATGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321611 25 - 25927173 AAGGAGATGACAGGGAAAATCAGCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351014 25 + 4669795 AGGGAGATGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 155 s chlSab2.chr7 134309058 25 + 135778131 AAGGAGATGACAGGGAAAATCAACG i chlSab2.chr7 T 113 C 0 s manLeu1.NW_012102221v1 2761774 25 - 2847728 AGGGAGATGACAGGGAAAATCAGGG i manLeu1.NW_012102221v1 C 0 T 113 s colAng1.NW_012116221v1 877347 25 + 2368649 AGGGAGATGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=32792.000000 s hg38.chr4_KI270789v1_alt 107287 11 + 205944 TCTCTGTGTAG s panTro5.chr4 192895101 11 + 194502333 TCTCTGTTTAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816053 11 + 4876863 TCTCTGTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704904 11 + 115148730 TCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987186 11 + 190429646 GCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 11 + 189454096 GCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321636 11 - 25927173 GCTCTGCTTAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309083 11 + 135778131 GCTCTGCTTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 11 - 2847728 GCTCTGCTTAG i manLeu1.NW_012102221v1 T 113 C 0 s colAng1.NW_012116221v1 877259 11 + 2368649 GCTCTGCTTAG i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=6264.000000 s hg38.chr4_KI270789v1_alt 107298 2 + 205944 TT s panTro5.chr4 192895112 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816064 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 2 + 115148730 TA i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987197 2 + 190429646 TT i rheMac8.chr5 C 0 T 113 s macFas5.chr5 187929966 2 + 189454096 TT i macFas5.chr5 C 0 T 113 s macNem1.NW_012013133v1 24321647 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309094 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761697 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877270 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=4095.000000 s hg38.chr4_KI270789v1_alt 107300 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704861 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987086 1 + 190429646 A i rheMac8.chr5 T 113 C 0 s macFas5.chr5 187929855 1 + 189454096 A i macFas5.chr5 T 113 C 0 s macNem1.NW_012013133v1 24321649 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309096 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761699 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877272 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e cerAty1.NW_012001672v1 3351039 155 + 4669795 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=89045.000000 s hg38.chr4_KI270789v1_alt 107301 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816067 17 + 4876863 TCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704862 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350884 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 T 155 C 0 s chlSab2.chr7 134309097 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761700 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=152489.000000 s hg38.chr4_KI270789v1_alt 107318 36 + 205944 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAG s panTro5.chr4 192895076 36 + 194502333 GGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 36 + 4876863 AGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAG i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 36 + 115148730 AGGGCGACGACAGGGAAAATCAGGGTCTCCGTTTAG i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987104 36 + 190429646 AGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 36 + 189454096 AGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 36 - 25927173 AGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350901 36 + 4669795 AAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309114 36 + 135778131 AGGGAGATGACAGGGAAAATCAGGGGCTCTGTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761717 36 - 2847728 AGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 36 + 2368649 AGGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=7870.000000 s hg38.chr4_KI270789v1_alt 107354 2 + 205944 TT s panTro5.chr4 192895112 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816064 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704859 2 + 115148730 TA i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987140 2 + 190429646 TT i rheMac8.chr5 C 0 T 111 s macFas5.chr5 187929909 2 + 189454096 TT i macFas5.chr5 C 0 T 91 s macNem1.NW_012013133v1 24321703 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 T 111 s cerAty1.NW_012001672v1 3350937 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309150 2 + 135778131 TT i chlSab2.chr7 C 0 T 112 s manLeu1.NW_012102221v1 2761753 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 T 112 s colAng1.NW_012116221v1 877326 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 T 111 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=33127.000000 s hg38.chr4_KI270789v1_alt 107356 18 + 205944 ATCTGTGTGACTCAGCAT s panTro5.chr4 192895114 18 + 194502333 ATCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816066 18 + 4876863 ATCTGTGTGACTCAGCAT i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704861 18 + 115148730 ATCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3350939 18 + 4669795 ATCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309040 18 + 135778131 ATCTATGCGACTCAGCAT i chlSab2.chr7 T 112 C 0 s manLeu1.NW_012102221v1 2761643 18 - 2847728 ATCTACGTGACTCAGCAT i manLeu1.NW_012102221v1 T 112 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877328 111 + 2368649 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e macFas5.chr5 187929911 91 + 189454096 T e rheMac8.chr5 188987142 111 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2297.000000 s hg38.chr4_KI270789v1_alt 107374 3 + 205944 GGT s panTro5.chr4 192895076 3 + 194502333 GGG i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816028 3 + 4876863 AGG i gorGor5.CYUI01015356v1 T 56 C 0 s nomLeu3.chr7b 112704879 3 + 115148730 AGG i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3350957 3 + 4669795 AGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309058 3 + 135778131 AAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761661 3 - 2847728 AAG i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877328 111 + 2368649 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e macFas5.chr5 187929911 91 + 189454096 T e rheMac8.chr5 188987142 111 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=72098.000000 s hg38.chr4_KI270789v1_alt 107377 35 + 205944 GAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT s panTro5.chr4 192895079 35 + 194502333 GAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816031 35 + 4876863 GAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704882 35 + 115148730 GCGACGACAGGGAAAATCAGGGTCTCCGTTTAGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929820 35 + 189454096 GAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT i macFas5.chr5 T 91 C 0 s cerAty1.NW_012001672v1 3350960 35 + 4669795 GAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309061 35 + 135778131 GAGATGACAGGGAAAATCAACGGCTCTGCTTAGTT i chlSab2.chr7 C 0 T 56 s manLeu1.NW_012102221v1 2761664 35 - 2847728 GAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTT i manLeu1.NW_012102221v1 C 0 T 56 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877328 111 + 2368649 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e rheMac8.chr5 188987142 111 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2548.000000 s hg38.chr4_KI270789v1_alt 107412 1 + 205944 A s panTro5.chr4 192895114 1 + 194502333 A i panTro5.chr4 C 0 T 56 s gorGor5.CYUI01015356v1 3816066 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 T 56 s nomLeu3.chr7b 112704917 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929855 1 + 189454096 A i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350995 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 T 112 s chlSab2.chr7 134309040 1 + 135778131 A i chlSab2.chr7 T 56 C 0 s manLeu1.NW_012102221v1 2761643 1 - 2847728 A i manLeu1.NW_012102221v1 T 56 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877328 111 + 2368649 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e rheMac8.chr5 188987142 111 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=158453.000000 s hg38.chr4_KI270789v1_alt 107413 56 + 205944 TCTGTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895059 56 + 194502333 TCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 T 56 T 56 s gorGor5.CYUI01015356v1 3816011 56 + 4876863 TCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 T 56 T 56 s nomLeu3.chr7b 112704918 56 + 115148730 TCTGTGTGACTCAGCATAGGGAGATGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929856 56 + 189454096 TCTGTGTGACTCAGCATAGGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTTA i macFas5.chr5 C 0 T 112 s cerAty1.NW_012001672v1 3350884 56 + 4669795 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 T 112 T 56 s chlSab2.chr7 134309041 56 + 135778131 TCTATGCGACTCAGCATAAGGAGATGACAGGGAAAATCAACGGCTCTGCTTAGTTA i chlSab2.chr7 C 0 T 169 s manLeu1.NW_012102221v1 2761644 56 - 2847728 TCTACGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 C 0 T 169 s colAng1.NW_012116221v1 877217 56 + 2368649 TCCGTGTGACTCAGCATCAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 T 111 T 56 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321705 111 - 25927173 T e rheMac8.chr5 188987142 111 + 190429646 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=251742.000000 s hg38.chr4_KI270789v1_alt 107469 56 + 205944 TCTGTGTGACTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTTA s panTro5.chr4 192895059 56 + 194502333 TCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i panTro5.chr4 T 56 C 0 s gorGor5.CYUI01015356v1 3816011 56 + 4876863 TCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCAGGGTCTCTGTTTAGTTA i gorGor5.CYUI01015356v1 T 56 T 152 s nomLeu3.chr7b 112704974 56 + 115148730 TCTGTGTGACTCAGCATAGGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987031 56 + 190429646 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCTGCGGCTCTGCTTAGTTA i rheMac8.chr5 T 111 C 0 s macFas5.chr5 187929800 56 + 189454096 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macFas5.chr5 T 112 C 0 s macNem1.NW_012013133v1 24321594 56 - 25927173 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGCGGCTCTGCTTAGTTA i macNem1.NW_012013133v1 T 111 C 0 s cerAty1.NW_012001672v1 3350884 56 + 4669795 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i cerAty1.NW_012001672v1 T 56 C 0 s chlSab2.chr7 134308928 56 + 135778131 TCTGTGTGACTCAGCATAAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i chlSab2.chr7 T 169 C 0 s manLeu1.NW_012102221v1 2761531 56 - 2847728 TCTGTGTGACTCAGCATAAGGCGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i manLeu1.NW_012102221v1 T 169 C 0 s colAng1.NW_012116221v1 877217 56 + 2368649 TCCGTGTGACTCAGCATCAGGAGATGACAGGGAAAATCAGGGGCTCTGCTTAGTTA i colAng1.NW_012116221v1 T 56 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=71676.000000 s hg38.chr4_KI270789v1_alt 107525 17 + 205944 TCTGTGTGACTCAGCAT s panTro5.chr4 192895115 17 + 194502333 TCTGTGTGACTCAGCAT i panTro5.chr4 C 0 T 112 s nomLeu3.chr7b 112705030 17 + 115148730 TTTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 T 56 s rheMac8.chr5 188987087 17 + 190429646 TCTGTGTGACTCAGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929856 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321650 17 - 25927173 TCTGTGTGACTCAGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350940 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761587 17 - 2847728 TCTGTGTGACTCAGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877273 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e gorGor5.CYUI01015356v1 3816067 152 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=2300.000000 s hg38.chr4_KI270789v1_alt 107542 1 + 205944 G s nomLeu3.chr7b 112704991 1 + 115148730 A i nomLeu3.chr7b T 56 C 0 s rheMac8.chr5 188987104 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929873 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321667 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350957 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761604 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877290 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e gorGor5.CYUI01015356v1 3816067 152 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895132 112 + 194502333 T e otoGar3.GL873580 11228266 0 - 11315646 C a score=158249.000000 s hg38.chr4_KI270789v1_alt 107543 37 + 205944 GGGAGACAATAGGGAAAATCAGGGTCTCTGTGTAGTT s panTro5.chr4 192895020 37 + 194502333 GGGAGATGATAGGGAAAATCAGGGTCTCTGTGTAGTT i panTro5.chr4 T 112 C 0 s gorGor5.CYUI01015356v1 3815915 37 + 4876863 GGGAGACGATAGGGAAAATCAGGGTCTCTGTGTAGTT i gorGor5.CYUI01015356v1 T 152 C 0 s nomLeu3.chr7b 112704992 37 + 115148730 GGGAGATGATAGGGAAAATCAGGGTGTCTGTTTAGTT i nomLeu3.chr7b C 0 T 111 s rheMac8.chr5 188987105 37 + 190429646 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929874 37 + 189454096 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321668 37 - 25927173 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350958 37 + 4669795 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309002 37 + 135778131 GGGAAATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761605 37 - 2847728 GGGAGATGACAGGCAAAATCAGGGGCTCTGTTGAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877291 37 + 2368649 GGGAGATGACAGGCAAAATCGGGGGCTCTGTTGAGTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=8190.000000 s hg38.chr4_KI270789v1_alt 107580 2 + 205944 AA s panTro5.chr4 192895057 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815952 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188987142 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929911 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321705 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3350995 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309039 2 + 135778131 AA i chlSab2.chr7 C 0 T 57 s manLeu1.NW_012102221v1 2761642 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877328 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e nomLeu3.chr7b 112705029 111 + 115148730 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=116699.000000 s hg38.chr4_KI270789v1_alt 107582 24 + 205944 TCTGTGTGACTCAGCATGGGGAGA s panTro5.chr4 192895059 24 + 194502333 TCTGTGTGATTCAGCATGGGGAGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815954 24 + 4876863 TCTGTGTGACTCAGCATGGGGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704918 24 + 115148730 TCTGTGTGACTCAGCATAGGGAGA i nomLeu3.chr7b T 111 C 0 s rheMac8.chr5 188987144 24 + 190429646 TCTGTGTGACTCAGCATAGGGAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929913 24 + 189454096 TCTGTGTGACTCAGCATAGGGAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321707 24 - 25927173 TCTGTGTGACTCAGCATAGGGAGA i macNem1.NW_012013133v1 C 0 I 4 s cerAty1.NW_012001672v1 3350997 24 + 4669795 TCTGTGTGACTCAGCATAGGGAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134308984 24 + 135778131 TCTGTGTGACTCAGCATAGGGAAA i chlSab2.chr7 T 57 C 0 s manLeu1.NW_012102221v1 2761644 24 - 2847728 TCTACGTGACTCAGCATAAGGAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877330 24 + 2368649 TCTGTGTGACTCAGCATAGGGAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=65997.000000 s hg38.chr4_KI270789v1_alt 107606 18 + 205944 CGATAGGGAAAATCAGGG s panTro5.chr4 192895083 18 + 194502333 CGATAGGGAAAATCAGGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3815978 18 + 4876863 CGATAGGGAAAATCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704942 18 + 115148730 TGATAGGGAAAATCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987168 18 + 190429646 TGACAGGGAAAATCAGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929937 18 + 189454096 TGACAGGCAAAATCAGGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3351021 18 + 4669795 TGACAGGGAAAATCAGGG i cerAty1.NW_012001672v1 C 0 T 57 s chlSab2.chr7 134309008 18 + 135778131 TGACAGGCAAAATCAGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761668 18 - 2847728 TGACAGGGAAAATCAGCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877354 18 + 2368649 TGACAGGGAAAATCAGGG i colAng1.NW_012116221v1 C 0 T 57 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=40666.000000 s hg38.chr4_KI270789v1_alt 107624 13 + 205944 TCTCTGTGTAGTT s panTro5.chr4 192895101 13 + 194502333 TCTCTGTTTAGTT i panTro5.chr4 C 0 T 57 s gorGor5.CYUI01015356v1 3815996 13 + 4876863 TCTCTGTGTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704960 13 + 115148730 TCTCTGTTTAGTT i nomLeu3.chr7b C 0 T 113 s rheMac8.chr5 188987186 13 + 190429646 GCTCTGTTGAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929955 13 + 189454096 GCTCTGTTGAGTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350982 13 + 4669795 GCTCTGTTGAGTT i cerAty1.NW_012001672v1 T 57 C 0 s chlSab2.chr7 134309026 13 + 135778131 GCTCTGTTGAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761686 13 - 2847728 GCTCTGCTTAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877315 13 + 2368649 GCTCTGTTGAGTT i colAng1.NW_012116221v1 T 57 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=156898.000000 s hg38.chr4_KI270789v1_alt 107637 41 + 205944 AATCTGTGTGACTCAGCATGGGGAGACGATAGGGAAAATCA s panTro5.chr4 192895057 41 + 194502333 AATCTGTGTGATTCAGCATGGGGAGACGATAGGGAAAATCA i panTro5.chr4 T 57 I 12 s gorGor5.CYUI01015356v1 3816009 41 + 4876863 AATCTGTGTGACTCAGCACAGGGAGACGATAGGGAAAATCA i gorGor5.CYUI01015356v1 C 0 T 39 s nomLeu3.chr7b 112704860 41 + 115148730 AATCTGTGTGACTCAGCATAGGGCGACGACAGGGAAAATCA i nomLeu3.chr7b T 113 C 0 s rheMac8.chr5 188987199 41 + 190429646 AATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187929968 41 + 189454096 AATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3350995 41 + 4669795 AATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309039 41 + 135778131 AATCTATGCGACTCAGCATAAGGAGATGACAGGGAAAATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761699 40 - 2847728 -ATCTGTGTGACTCAGCATAGGGAGATGACAGGCAAAATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877328 41 + 2368649 AATCTGTGTGACTCAGCATAGGGAGATGACAGGGAAAATCA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e panPan2.chr4 192778732 40 + 195804263 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1883.000000 s hg38.chr4_KI270789v1_alt 107678 1 + 205944 G s nomLeu3.chr7b 112704901 1 + 115148730 G i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 188987240 1 + 190429646 G i rheMac8.chr5 C 0 I 9 s macFas5.chr5 187930009 1 + 189454096 G i macFas5.chr5 C 0 T 210 s cerAty1.NW_012001672v1 3351036 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 I 7 s chlSab2.chr7 134309080 1 + 135778131 A i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012102221v1 2761739 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 I 66 s colAng1.NW_012116221v1 877369 1 + 2368649 G i colAng1.NW_012116221v1 C 0 I 6 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e gorGor5.CYUI01015356v1 3816050 39 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=-829.000000 s hg38.chr4_KI270789v1_alt 107679 1 + 205944 -T s nomLeu3.chr7b 112704904 1 + 115148730 -T i nomLeu3.chr7b I 2 C 0 s colAng1.NW_012116221v1 877376 1 + 2368649 G- i colAng1.NW_012116221v1 I 6 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e chlSab2.chr7 134309081 3 + 135778131 I e cerAty1.NW_012001672v1 3351037 7 + 4669795 I e macNem1.NW_012013133v1 24321731 4 - 25927173 I e macFas5.chr5 187930010 210 + 189454096 T e rheMac8.chr5 188987241 9 + 190429646 I e gorGor5.CYUI01015356v1 3816050 39 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=9173.000000 s hg38.chr4_KI270789v1_alt 107680 13 + 205944 CTCTGTGTAGTTA s nomLeu3.chr7b 112704905 13 + 115148730 CTCCGTTTAGTTA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3351044 13 + 4669795 CTCTGTTGAGTTA i cerAty1.NW_012001672v1 I 7 C 0 s chlSab2.chr7 134309084 13 + 135778131 CTCTGCTTAGTTA i chlSab2.chr7 I 3 C 0 s colAng1.NW_012116221v1 877377 13 + 2368649 CTCTGTTGAGTTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e macNem1.NW_012013133v1 24321731 4 - 25927173 I e macFas5.chr5 187930010 210 + 189454096 T e rheMac8.chr5 188987241 9 + 190429646 I e gorGor5.CYUI01015356v1 3816050 39 + 4876863 T e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=33267.000000 s hg38.chr4_KI270789v1_alt 107693 17 + 205944 TCTGTGTGACTCAGCAT s gorGor5.CYUI01015356v1 3816011 17 + 4876863 TCTGTGTGACTCAGCAC i gorGor5.CYUI01015356v1 T 39 C 0 s nomLeu3.chr7b 112704918 17 + 115148730 TCTGTGTGACTCAGCAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929800 17 + 189454096 TCTGTGTGACTCAGCAT i macFas5.chr5 T 210 C 0 s cerAty1.NW_012001672v1 3351057 17 + 4669795 TCTGTGTGACTCAGCAT i cerAty1.NW_012001672v1 C 0 T 28 s chlSab2.chr7 134309097 17 + 135778131 TCTGTGTGACTCAGCAT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 877390 17 + 2368649 TCTGTGTGACTCAGCAT i colAng1.NW_012116221v1 C 0 T 28 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e macNem1.NW_012013133v1 24321731 4 - 25927173 I e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=3808.000000 s hg38.chr4_KI270789v1_alt 107710 5 + 205944 GGGGA s gorGor5.CYUI01015356v1 3816028 5 + 4876863 AGGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704935 5 + 115148730 AGGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929817 5 + 189454096 AAGGA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309114 5 + 135778131 AGGGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e dasNov3.JH570353 1439900 26 - 2520184 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=5665.000000 s hg38.chr4_KI270789v1_alt 107715 7 + 205944 GACGATA s gorGor5.CYUI01015356v1 3816033 7 + 4876863 GACGATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704940 7 + 115148730 GATGATA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929822 7 + 189454096 GATGACA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309119 7 + 135778131 GATGACA i chlSab2.chr7 C 0 C 0 s dasNov3.JH570353 1439926 7 - 2520184 GAAGGAA i dasNov3.JH570353 I 26 C 0 e calJac3.chr3 189605754 38 - 190850796 T e cebCap1.NW_016107886v1 990203 0 - 2196201 C e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=1314.000000 s hg38.chr4_KI270789v1_alt 107722 1 + 205944 G s gorGor5.CYUI01015356v1 3816040 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704947 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929829 1 + 189454096 G i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134309126 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s cebCap1.NW_016107886v1 990203 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1439933 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e macNem1.NW_012013133v1 24321731 4 - 25927173 I e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I e otoGar3.GL873580 11228266 0 - 11315646 C a score=7200.000000 s hg38.chr4_KI270789v1_alt 107723 2 + 205944 GG s gorGor5.CYUI01015356v1 3816041 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704948 2 + 115148730 GG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929830 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321735 2 - 25927173 GG i macNem1.NW_012013133v1 I 4 C 0 s chlSab2.chr7 134309127 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s cebCap1.NW_016107886v1 990204 2 - 2196201 GG i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11228266 2 - 11315646 GG i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1439934 2 - 2520184 GG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e canFam3.chr16 16946084 0 - 59632846 C e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I a score=529.000000 s hg38.chr4_KI270789v1_alt 107725 1 + 205944 A s gorGor5.CYUI01015356v1 3816043 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704950 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929832 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321737 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309129 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s cebCap1.NW_016107886v1 990206 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11228268 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946084 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1439936 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e rheMac8.chr5 188987241 9 + 190429646 I e panPan2.chr4 192778732 40 + 195804263 I e panTro5.chr4 192895098 12 + 194502333 I a score=10520.000000 s hg38.chr4_KI270789v1_alt 107726 3 + 205944 AAA s panPan2.chr4 192778772 3 + 195804263 AAA i panPan2.chr4 I 40 C 0 s gorGor5.CYUI01015356v1 3816044 3 + 4876863 AAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704951 3 + 115148730 AAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929833 3 + 189454096 AAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321738 3 - 25927173 AAA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134309130 3 + 135778131 AAA i chlSab2.chr7 C 0 C 0 s cebCap1.NW_016107886v1 990207 3 - 2196201 AAA i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11228269 2 - 11315646 -AA i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16946085 3 - 59632846 AAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1439937 3 - 2520184 GAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189605754 38 - 190850796 T e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e rheMac8.chr5 188987241 9 + 190429646 I e panTro5.chr4 192895098 12 + 194502333 I a score=24772.000000 s hg38.chr4_KI270789v1_alt 107729 9 + 205944 TCAGGGTCT s panPan2.chr4 192778775 9 + 195804263 TCAGGGTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816047 9 + 4876863 TCAGGGTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704954 9 + 115148730 TCAGGGTCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187929836 9 + 189454096 TCAGCGGCT i macFas5.chr5 C 0 I 174 s macNem1.NW_012013133v1 24321741 9 - 25927173 TCAGGGGCT i macNem1.NW_012013133v1 C 0 I 4 s chlSab2.chr7 134309133 9 + 135778131 TCAGGGGCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189605716 9 - 190850796 TCAGGGGCT i calJac3.chr3 T 38 C 0 s cebCap1.NW_016107886v1 990210 9 - 2196201 TCAGGGGCT i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11228273 8 - 11315646 CGAGGGCC- i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16946088 9 - 59632846 CCAAGAGCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1439940 9 - 2520184 CCGGATACC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e colAng1.NW_012116221v1 877407 28 + 2368649 T e manLeu1.NW_012102221v1 2761740 66 - 2847728 I e cerAty1.NW_012001672v1 3351074 28 + 4669795 T e rheMac8.chr5 188987241 9 + 190429646 I e panTro5.chr4 192895098 12 + 194502333 I a score=49144.000000 s hg38.chr4_KI270789v1_alt 107738 6 + 205944 CTGTGC s panPan2.chr4 192778784 6 + 195804263 CTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816056 6 + 4876863 CTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112704963 6 + 115148730 CTGTTT i nomLeu3.chr7b C 0 I 56 s rheMac8.chr5 188987250 6 + 190429646 CTGTTG i rheMac8.chr5 I 9 C 0 s macFas5.chr5 187930019 6 + 189454096 CTGTTG i macFas5.chr5 I 174 C 0 s macNem1.NW_012013133v1 24321754 6 - 25927173 CTGTTG i macNem1.NW_012013133v1 I 4 C 0 s cerAty1.NW_012001672v1 3351046 6 + 4669795 CTGTTG i cerAty1.NW_012001672v1 T 28 C 0 s chlSab2.chr7 134309142 6 + 135778131 CTGTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761806 6 - 2847728 CTGTTG i manLeu1.NW_012102221v1 I 66 C 0 s colAng1.NW_012116221v1 877379 6 + 2368649 CTGTTG i colAng1.NW_012116221v1 T 28 C 0 s calJac3.chr3 189605725 6 - 190850796 CTGTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 990219 6 - 2196201 CTGTTC i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11228281 6 - 11315646 CTGTTC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946097 6 - 59632846 CTGTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1439949 6 - 2520184 CTGTTC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T e panTro5.chr4 192895098 12 + 194502333 I a score=47128.000000 s hg38.chr4_KI270789v1_alt 107744 4 + 205944 AGTT s panTro5.chr4 192895110 4 + 194502333 AGTT i panTro5.chr4 I 12 C 0 s panPan2.chr4 192778790 4 + 195804263 AGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816062 4 + 4876863 AGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705025 4 + 115148730 AGTT i nomLeu3.chr7b I 56 C 0 s rheMac8.chr5 188987256 4 + 190429646 AGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930025 4 + 189454096 AGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321760 4 - 25927173 AGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351052 4 + 4669795 AGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309148 4 + 135778131 AGTT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2761812 4 - 2847728 AGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877385 4 + 2368649 AGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605731 4 - 190850796 AGTT i calJac3.chr3 C 0 I 1 s cebCap1.NW_016107886v1 990225 4 - 2196201 AGTT i cebCap1.NW_016107886v1 C 0 I 1 s otoGar3.GL873580 11228287 4 - 11315646 AGTT i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16946103 4 - 59632846 AGTT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1439955 4 - 2520184 ACTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I e saiBol1.JH378165 13094616 18 - 14256875 T a score=243436.000000 s hg38.chr4_KI270789v1_alt 107748 22 + 205944 -ATCTGTGTGA--CTCAGCATACAT s panTro5.chr4 192895114 22 + 194502333 -ATCTGTGTGA--CTCAGCATACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778794 22 + 195804263 -ATCTGTGTGA--CTCAGCATACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816066 22 + 4876863 -ATCTGTGTGA--CTCAGCATACAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705029 22 + 115148730 -ATTTGTGTGA--CTCAGCATACAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987260 22 + 190429646 -ATCAGTGTGA--CTCAGCATACAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930029 22 + 189454096 -ATCAGTGTGA--CTCAGCATACAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321764 22 - 25927173 -ATCAGTGTGA--CTCAGCATACAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351056 22 + 4669795 -ATCTGTGTGA--CTCAGCATACAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309153 22 + 135778131 -ATCTGTGTGA--CTCAGCATACAT i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2761816 22 - 2847728 -ATCTGTGTGA--CTCAGCATACAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877389 22 + 2368649 -ATCTGTGTGA--CTCAGCATACAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605736 22 - 190850796 -ATCTGTGTGA--CTCAGCATACAT i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13094598 22 - 14256875 -ATCTGTGTGA--CTCAGCATACAT i saiBol1.JH378165 T 18 C 0 s cebCap1.NW_016107886v1 990230 22 - 2196201 -ATCTGTGTGA--CTCAGCGTACAT i cebCap1.NW_016107886v1 I 1 C 0 s otoGar3.GL873580 11228292 24 - 11315646 -ATCTGGGGGACTCTCAGCACAGAT i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16946108 22 - 59632846 -CTCTGTGTGA--CTCAGCATAGAC i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1439959 25 - 2520184 ACGCTGTGGGAATCTTAACACTGAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384750 3 - 5030052 I a score=469110.000000 s hg38.chr4_KI270789v1_alt 107770 49 + 205944 GGGTACCGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTTTT s panTro5.chr4 192895136 49 + 194502333 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778816 49 + 195804263 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816088 49 + 4876863 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705051 49 + 115148730 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987282 49 + 190429646 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930051 49 + 189454096 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321786 49 - 25927173 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351078 49 + 4669795 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309175 49 + 135778131 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTTAAAAAGGATTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761838 49 - 2847728 GGGTACTGCATGGATAGAAAAGCATAATAAAGTTTGAAAAAGTATTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877411 49 + 2368649 GGGTACTGCATGGATAGAAAAGCATGATAAAGTTTGAAAAAGTATTCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605758 47 - 190850796 GAGTGCCACAGGCGTAGAAAAGCGTGGTAAAGTTTGAAAAAGG--TTTT i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13094620 49 - 14256875 GAGTGTCGCAGGCATAGAAAAGCATGGTGAAGTTTGAAAAAGGTTTTTT i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 990252 49 - 2196201 GAGTGCCGCAGGCATAGAAAAGCATGGTGAAGTTTGGAAAAGTCTTTTT i cebCap1.NW_016107886v1 C 0 I 3 s aotNan1.NW_018492112v1 3384753 49 - 5030052 GAGTGCCGCAGGCATAGAAAAGCATGGTAAAGTTTGAAAAAGTTTTTTT i aotNan1.NW_018492112v1 I 3 I 17 s otoGar3.GL873580 11228316 49 - 11315646 AAACATCATGTGAATAGGTAAGCACAGTCAAGTTCAAAGCAACATTATT i otoGar3.GL873580 C 0 I 3 s canFam3.chr16 16946130 32 - 59632846 -----AAGTAGGTTTGTATAAGCATGATG------------TTATTGTT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1439984 39 - 2520184 GAGTACC-TGTGG---GAGAAGTATGACA------GAAGTCCTATTTTT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=-4641.000000 s hg38.chr4_KI270789v1_alt 107819 3 + 205944 AAG s panTro5.chr4 192895185 3 + 194502333 AAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778865 3 + 195804263 AAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816137 3 + 4876863 AAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705100 3 + 115148730 AAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987331 3 + 190429646 AAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930100 3 + 189454096 AAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321835 3 - 25927173 AAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351127 3 + 4669795 AAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309224 3 + 135778131 AAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761887 3 - 2847728 AAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877460 3 + 2368649 AAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605808 1 - 190850796 G-- i calJac3.chr3 I 3 C 0 s saiBol1.JH378165 13094672 1 - 14256875 G-- i saiBol1.JH378165 I 3 C 0 s cebCap1.NW_016107886v1 990304 1 - 2196201 a-- i cebCap1.NW_016107886v1 I 3 C 0 s otoGar3.GL873580 11228368 3 - 11315646 TAG i otoGar3.GL873580 I 3 C 0 s canFam3.chr16 16946164 1 - 59632846 G-- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1440023 2 - 2520184 -AG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3384802 17 - 5030052 I a score=1120961.000000 s hg38.chr4_KI270789v1_alt 107822 110 + 205944 tgttga------------tgatgat---gatgat--TTTGAATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTACAAAACCAAAAAAA--TAAAAAACAAACTGATGTTCATCT s panTro5.chr4 192895188 110 + 194502333 tggtga------------tgatgat---gatgat--TTTGAATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTACGAAACCAAAAAAA--TAAAAAACAAACTGATGTTCATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778868 110 + 195804263 tggtga------------tgatgat---gatgat--TTTGAATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTACGAAACCAAAAAAA--TAAAAAACAAACTGATGTTCATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816140 110 + 4876863 tgttga------------tgatgat---gatgat--TTTGAATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTACGAAACCAAAAAAA--TAAAAAACAAACTGATGTTCATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705103 109 + 115148730 TGTTGA------------TGATGAT---GATTTT--TTTGGATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGCGAAACCAAAAAAA--TAAAAAA-AAACTGATGTTCATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987334 122 + 190429646 tgttgatgatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGTGAAACCAAAAACA--TAAAAAACAAACTGATGTTCATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930103 122 + 189454096 tgttgatgatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGTGAAACCAAAAACA--TAAAAAACAAACTGATGTTCATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321838 122 - 25927173 tgttgatgatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGTGAAACCAAAAACA--TAAAAAACAAACTGATGTTCATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351130 122 + 4669795 tgttgatgatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGTGAAACCAAAAGCA--TAAAAAACAAACTGATGTTCATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309227 122 + 135778131 tgttgataatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTACAAT--TATGATGTTATGCAAAACCAAAAACA--TAAAAAACAAACTGATGTTCATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2761890 116 - 2847728 tgttgatgatga------tgatgat---gatgat--TTTGAATGCAAAAATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGTGCGAAACCAAAAACA--TAAAAAACAAACTGATGTTCATCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877463 121 + 2368649 tgttgatgatgatgatgttgatgat---gatgat--TTTGAATGCAAAAATACCTTGATTGTGATAATCTCTTCAAT--TATGATGTTGTGCGAAACCAAAAATA--T-AAAAACAAACTGATGTTCATCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605809 114 - 190850796 TGTTGATGATGATGAT------------GATGAT--TCTGAATGCAAACATACTTCGAATGTGATGATCTCTTCAAT--TATGATGTTGTGCAAAACCAAAAAAAA-AAATAAATAAACGGATGTTTGTCG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094673 127 - 14256875 tgttgatgatggtgatgttgatgataaggatgat--TCTGAATGCAAACATACTTTGATTGTGATGATCTCTTCAAT--TATGATGTTGCTCAGAACCCCCAAAAATAAATAAATAAACGGATGTTTGTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990305 121 - 2196201 tgatgatgttgatgatgatgat------gatgat--TCTGAATGCAAACATACTTTGATTGTGACGATCTCTTCAAT--TATGATGTTGTGCAAGACCAAAAAAAATAAATAAATAAACCGATGTTTGTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384819 112 - 5030052 tgttgatgatgag---------------gatgat--TTTGAATGCAAACATAGTTTGATTGTGATGATCTCTTCAAT--TATAATGTTGTGCAAAACCAAAAAACATTAATAAATAAACGGATGTTTGTCA i aotNan1.NW_018492112v1 I 17 C 0 s otoGar3.GL873580 11228371 122 - 11315646 TGTTGACAATTGCGATGCTGCTGCT---GACCAT--TTGGAATATGAACATGCCATGATTATGATAATGTGTTCAATAAAATTATGTTGTTCCAATCAACAAAAA----GAAAACATTCTGACGGTCTCCA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946165 113 - 59632846 TGTTGA---TAATGATGTTGATGAT---GATGAT--TTTGAATAAAAACATACTATGTTTACGATTATCTGTTCGAA--GAGTATGCTGT---AAACAACAACAA--CAACAACT---CTGATGTTCTCCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440025 110 - 2520184 TGTTGATGATGATTACATGAATGTC---GATGATGATTCAAAAACAAACACACCATGATTATGATGATCTGTTCAAA--GTTTATGCTGTGAGGAA----AGACT--T----------CGGAAGTTCTTCG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943321 276 + 3993831 I e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=625891.000000 s hg38.chr4_KI270789v1_alt 107932 46 + 205944 TCAATTTGAGGTTAAGAAAACTCATTATA-TTCCCA-GCATACCTTCT s panTro5.chr4 192895298 46 + 194502333 TCAATTTGAGGTTAAGAAAACTCATTATA-TTCCCA-GCATATCTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192778978 46 + 195804263 TCAATTTGAGGTTAAGAAAACTCATTATA-TTCCCA-GCATATCTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816250 46 + 4876863 TCAATTTGAGGTTAAGAAAACTTATTATA-TTCCCA-GCATACCTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705212 46 + 115148730 TCAATTTGAGGTTAAGAAAACTTATTATG-TTCCCA-GCATACCTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987456 46 + 190429646 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930225 46 + 189454096 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24321960 46 - 25927173 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351252 46 + 4669795 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309349 46 + 135778131 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762006 46 - 2847728 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCC-GCATACCTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877584 46 + 2368649 TCAGTTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605923 41 - 190850796 TCAATTTGAGGTT-----AACTCATTATA-TTCCCA-GCGTACCTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094800 46 - 14256875 TCAATGTGAGGTTAAGAAAACTCATTATA-TTCCCA-GCATACCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990426 46 - 2196201 TCACTTTGAGGTTAAGAAAACTCATTGTA-TTCCCA-GCATACCTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3384931 46 - 5030052 TCAATTTGAGGTTAAGAAAACTCATTATG-TTCCCA-GCATACCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943597 47 + 3993831 TCAATTTCAGGTTAAGAAAACTCATGATACTTCCCA-GTTTACCTTTC i proCoq1.NW_012145301v1 I 276 C 0 s otoGar3.GL873580 11228493 47 - 11315646 TCAATTTCAGGTTAAGAAAACTCCTGATGTTCCCCA-GTTTACCTTGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946278 47 - 59632846 TCCATTTGAGGTTAAGAAAACTCAGTATA-TTCCCCTATTTACCTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440135 44 - 2520184 TCAGTTTGAGGTAAGGAAAGCTCAGTATG-TTCCCA--TTTACCTTT- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17503947 402 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=1751562.000000 s hg38.chr4_KI270789v1_alt 107978 115 + 205944 TGTTGATTGAA---TGATTGAAGAGTAATCAGCAAACAACCTAATTTCTAAATCCTTGACAGCCATAATGATAATGTGAATCTCACTTGGAGAAATTCTCATCCCAAATTGTGTTCCA s panTro5.chr4 192895344 115 + 194502333 TGTTGATTGAA---TGATTGAAGAGTAATCAGCAAACAACCTAATTTCTAAATCCTTGACAGCCATAATGATAATGTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779024 115 + 195804263 TGTTGATTGAA---TGATTGAAGAGTAATCAGCAAACAACCTAATTTCTAAATCCTTGACAGCCATAATGATAATGTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816296 115 + 4876863 TGTTGATTGAA---TGATTGAAGAGTAATCAGCAAACAACCTAATTTCTAAATCCTTGACAGCCATAATGATAATGTGGATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705258 115 + 115148730 TGTTGATTGAA---CGATTGAAGAGCAATCAGCAAAAAACCTGATTTCTAAATCCTTGACAGCCATAATGATAATGTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987502 114 + 190429646 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930271 114 + 189454096 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322006 114 - 25927173 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351298 114 + 4669795 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309395 114 + 135778131 TGTTGATTGAA---CAATTGAACAGCAATCGGCAAA-AACCTAATTTCTAAATCCCTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762052 114 - 2847728 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCTTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877630 114 + 2368649 TGTTGATTGAA---CGATTGAACAGCAATCAGCAAA-AACCTAATTTCTAAATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATTGTGTTCCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189605964 115 - 190850796 TGTTGATGGAA---CGACTGAAGAGCAATCAGCAAAAAATCTAATTTCTAGATCCCTGACAGCCATAATGATAATTTGAATCTCACGTGGAGAAATTTTCATCCCAAATCGTGTTCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094846 115 - 14256875 TGTTGATTGAA---CGACTAAAGAGCAATCAGCAAAAAACCTAATTTCTAGATTCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATCGTGTTCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990472 115 - 2196201 TGTTGATTGAA---CGATTGAAGAGCAATCAGCAAAAAACCTAATTTCTAGATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATCGTGTTCCA i cebCap1.NW_016107886v1 C 0 I 3 s aotNan1.NW_018492112v1 3384977 114 - 5030052 TGTTGATTGAG---CGATTGAAGAGCAATCAGC-AAAAACCTAACTTCTAGATCCTTGACAGCCATAATGATAATTTGAATCTCACTTGGAGAAATTTTCATCCCAAATCGTGTTCCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17504349 115 - 93316391 TGTTGGTTGAT---TGATTGAAGAGCAATCAGTATAGAACCTCATTTCTAAATCCTTGACAGCTATGATGATGTTTTAAATCTCACATGGAGAAATTTTCATCCCAAATTGTATTCCA i micMur3.chr14 I 402 C 0 s proCoq1.NW_012145301v1 3943644 115 + 3993831 TGTTGGTTGAT---TGATTGAAGAGCAATCAGTATAGAACCTAATTTCTAAACCCTTGACAGCTATGACGATGTTTTAAATCTCGCATGGAGAAACTTTCATCCCAAATTGTATTCCA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11228540 110 - 11315646 TGTTGATTGACTGATGATTGACGAGCCATCTGTACATAACCTCATTTCCAAATTCTTGACAGCCAGGATGACATTTTAAATTTCACATGGAGAAAGTGCCATCCCAGACT-------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946325 112 - 59632846 GGCTGATTGAA---CAGTTGAAGAGCAATCAGTATAAAACCTAATTTCTAAATCCTTCACAGA---AATAATATTTTAAATCTCACTTAGACAAAATTTCATCCCAAACTGCATTCTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440179 112 - 2520184 TGTTGACTGAA---CGATTGCAAAGCAATCAGCATCAAGTGTAATTTCTAAAACCTTCATGGCTATAATG---TTTTAAATCTCCCTTGGAGAAATTTTTGTCCCAAGTTGTATTCCA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86588523 3714 - 129401213 I a score=42031.000000 s hg38.chr4_KI270789v1_alt 108093 6 + 205944 TTGCTT s panTro5.chr4 192895459 6 + 194502333 TTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779139 6 + 195804263 TTGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816411 6 + 4876863 TTGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705373 6 + 115148730 TTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987616 6 + 190429646 TTACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930385 6 + 189454096 TTACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322120 6 - 25927173 TTACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351412 6 + 4669795 TTACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309509 6 + 135778131 TTACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762166 6 - 2847728 TTACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877744 6 + 2368649 TTGCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606079 3 - 190850796 CTG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094961 3 - 14256875 CTG--- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3385091 3 - 5030052 CTG--- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17504464 6 - 93316391 TTGCTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3943759 6 + 3993831 TTGCTT i proCoq1.NW_012145301v1 C 0 I 111 s otoGar3.GL873580 11228650 6 - 11315646 TTGCCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946437 6 - 59632846 TTGCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440291 6 - 2520184 CAGCTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 990587 3 - 2196201 I e mm10.chr8 86588523 3714 - 129401213 I a score=113758.000000 s hg38.chr4_KI270789v1_alt 108099 13 + 205944 CATAGGAATGTAC s panTro5.chr4 192895465 13 + 194502333 CATAGGAATGTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779145 13 + 195804263 CATAGGAATGTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816417 13 + 4876863 CATAGGAATGTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705379 13 + 115148730 CATAGGAATGTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987622 13 + 190429646 CATAGGAGTGTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930391 13 + 189454096 CATAGGAGTGTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322126 13 - 25927173 CATAGGAGTGTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351418 13 + 4669795 CATAGGAGTGTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309515 13 + 135778131 CATAGGAGTGTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762172 13 - 2847728 CATAGGAGTGTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877750 13 + 2368649 CATAGGAGTGTAC i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17504470 13 - 93316391 CGTGGGACTGTAG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11228656 13 - 11315646 CATGGGACTTCAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946443 13 - 59632846 CATAGGAATATAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440297 13 - 2520184 CATAGGAATGTAC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189606082 0 - 190850796 C e cebCap1.NW_016107886v1 990587 3 - 2196201 I e proCoq1.NW_012145301v1 3943765 111 + 3993831 I e mm10.chr8 86588523 3714 - 129401213 I e aotNan1.NW_018492112v1 3385094 0 - 5030052 C e saiBol1.JH378165 13094964 0 - 14256875 C a score=375932.000000 s hg38.chr4_KI270789v1_alt 108112 28 + 205944 TGAATCCGTTTCAAAGATCAATGAAAAT s panTro5.chr4 192895478 28 + 194502333 TGAATCCGTTTCAAAGATCAATGAAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779158 28 + 195804263 TGAATCCGTTTCAAAGATCAATGAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816430 28 + 4876863 TGAATCCGTTTCAAAGATCAATGAAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705392 28 + 115148730 TGAATCCCTTTCAAAGATCAATGAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987635 28 + 190429646 TGAATCCATTTTAAAGGTCAATGAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930404 28 + 189454096 TGAATCCATTTTAAAGGTCAATGAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322139 28 - 25927173 TGAATCCATTTTAAAGGTCAATGAAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351431 28 + 4669795 TGAATCCATTTTAAAGGTCAATGAAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309528 28 + 135778131 TGAATCCATTTTAAAGGTCAATGAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762185 28 - 2847728 TGAATCCATTTTAAAGGTCAATGAAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877763 28 + 2368649 TGAATCCGTTTTAAAGGTCAATGAAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606082 28 - 190850796 TGAATCAGTTTCAAAGATCAGTGAAAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094964 28 - 14256875 TGAATCAATTTCAAAGATCAGTGAAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990590 28 - 2196201 TGAGTCAGTTTCAAAGATCAATGAAAAT i cebCap1.NW_016107886v1 I 3 C 0 s aotNan1.NW_018492112v1 3385094 28 - 5030052 TGAATCAGTTTCAAAGATCAGTGAAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17504483 28 - 93316391 TAAATCAGCTGCAAAGATCAGTGAAAAT i micMur3.chr14 C 0 I 699 s otoGar3.GL873580 11228669 28 - 11315646 GAAATCAGCTCTAAAGATCAGTGAAAAC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946456 28 - 59632846 TAAAAACATTTCAAAGATTAATGAGTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440310 28 - 2520184 TAAGTCAGTTTTAAAGATCAATGAAAGC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943765 111 + 3993831 I e mm10.chr8 86588523 3714 - 129401213 I a score=-25857.000000 s hg38.chr4_KI270789v1_alt 108140 69 + 205944 AATGGCA---T-GCTCATATATTGGATTTAAACATCTTATATGATTG-TGGTTATTG----TGTTTTTTTT-------------------------------TTTTTT------A s panTro5.chr4 192895506 67 + 194502333 AATGGCA---T-GCTCATATATTGAATTTAAACATCTTATATGATTG-TGGTTATTG----TGTTTTTTTT-------------------------------TTTT--------A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779186 66 + 195804263 AATGGCA---T-GCTCATATATTGAATTTAAACATCTTATATGATTG-TGGTTATTG----TGTTTTTTTT-------------------------------TTT---------A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816458 67 + 4876863 AATGGCA---T-GCTCATATATTGAATTTAAACATCTTATGTGATTG-TGGTTATTC----TGTGTTTTTT-------------------------------TTTT--------A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705420 75 + 115148730 AATGGCA---T-ACTCATACATTGAATTTAAACATCTTATATGATTG-TGGttattg----tgtttttttt-------------------------------tttttttttttAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987663 23 + 190429646 AATAGCA---T----------------------------------------------------TTTTTTTT-------------------------------TTTTTA------A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930432 23 + 189454096 AATAGCA---T----------------------------------------------------TTTTTTTT-------------------------------TTTTTT------A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322167 21 - 25927173 AATAGCA---------------------------------------------------------TTTTTTT-------------------------------TTTTTT------A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351459 26 + 4669795 AATAGCttttt----------------------------------------------------tttttttt-------------------------------tttttA------A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309556 23 + 135778131 AATAGCT---T----------------------------------------------------TTTTTTTT-------------------------------TTTTTA------A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762213 22 - 2847728 AATAGCt---t----------------------------------------------------tttttttt-------------------------------ttttt-------t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877791 20 + 2368649 AATAGCA---T----------------------------------------------------TTTTGTTT-------------------------------TTT---------A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606110 65 - 190850796 AACAGCA---T-GCTCATATCTTGGATATAAACATCTTATATGATTG-TGGTTAT--------TGTTTTTT-------------------------------TTCTTT------C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13094992 96 - 14256875 AATGGCG---T-GCTCATATCTAGGATATAAACATCTTATATGATTG-CGGTTGC--------TGTTTTTTTTGTTGTTGTTtttgtttgtttgtttgtttgtttTTC------C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990618 64 - 2196201 AATAGCA---T-GCCCATATCTTGGATATAAACATCTTATATGATTG-TGGTTAT--------TGTTTTT--------------------------------TTTTTT------C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385122 65 - 5030052 AACGGCA---T-GCTCATATCTTGGATATAAACATCTTATATGATGG-TGGTTAT--------TGTTTTTT-------------------------------TTTTTT------C i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228697 70 - 11315646 AATGACA---C-ACTCAGAACTCTACTGTGTCCCTCATACATGATTG-TGCCCAGTATAACTATGGTTTGT-------------------------------TCTT--------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946484 56 - 59632846 AATGAAG---C-ATGCATAACTTCAATATATGTATC--ATATTATTGTTGGCTGG--------TAGTCTT--------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440338 58 - 2520184 AATGAAC---TCACTCATAACTTGAATGCATGTGTCTCATGTGATTG-TAGGGAG--------TAGTCTT--------------------------------------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943765 111 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=556741.000000 s hg38.chr4_KI270789v1_alt 108209 38 + 205944 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA s panTro5.chr4 192895573 38 + 194502333 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779252 38 + 195804263 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816525 38 + 4876863 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705495 38 + 115148730 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987686 38 + 190429646 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930455 38 + 189454096 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322188 38 - 25927173 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351485 38 + 4669795 ATTTCTGAAAACAAACAAAAGGTCCTAGGAGAAAAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309579 34 + 135778131 ATTTCTGA----AAACAAAAGGTCCTAGGAGAAAAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762235 34 - 2847728 atttCTGA----AAACAAAAGGTCCTAGGAGAAAAGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877811 38 + 2368649 ATTTCTGAAAACAAACGAAAGGTCCTAGGAGAAAAGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606175 37 - 190850796 ATTTCTGAAAACAAACACAAGGTCCCA-GAGAAAAGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095088 38 - 14256875 ATTTCTGGAAACAAGCACAAGGTCCCAGGAGAAAAGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990682 38 - 2196201 ATTTCTGAAAACAAACACAAGGTCCCAGGAGAAAAGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385187 38 - 5030052 ATTTCTGAAAACAAACACGAGGTCCCAGGAGAAAAGTA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943876 37 + 3993831 ATTTCTGAGAACAAACAAAAGGTCCTC-GGGAAAAGTA i proCoq1.NW_012145301v1 I 111 C 0 s otoGar3.GL873580 11228767 38 - 11315646 ATTTCTGAGAAGAAACACAAGGTCCTAGGGGAAAAGTG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946540 38 - 59632846 ATTTCTGAAAACAAACAAAAGGTCCTAGAAGAAAAGTA i canFam3.chr16 C 0 I 167 s dasNov3.JH570353 1440396 38 - 2520184 ATTTCTGAAAACAAACAAAAGGACCTAGGATAAATGTA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17504511 699 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=28926.000000 s hg38.chr4_KI270789v1_alt 108247 2 + 205944 AA s panTro5.chr4 192895611 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779290 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816563 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705533 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987724 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930493 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322226 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351523 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309613 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762269 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877849 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606212 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095126 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990720 2 - 2196201 AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385225 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943913 2 + 3993831 AA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11228805 2 - 11315646 AA i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1440434 2 - 2520184 AG i dasNov3.JH570353 C 0 I 104 e micMur3.chr14 17504511 699 - 93316391 I e canFam3.chr16 16946578 167 - 59632846 I e mm10.chr8 86588523 3714 - 129401213 I a score=40383.000000 s hg38.chr4_KI270789v1_alt 108249 3 + 205944 CCT s panTro5.chr4 192895613 3 + 194502333 CCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779292 3 + 195804263 CCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816565 3 + 4876863 CCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705535 3 + 115148730 CCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987726 3 + 190429646 CCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930495 3 + 189454096 CCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322228 3 - 25927173 CCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351525 3 + 4669795 CCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309615 3 + 135778131 CCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762271 3 - 2847728 CCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877851 3 + 2368649 CCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606214 3 - 190850796 CCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095128 2 - 14256875 CC- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990722 3 - 2196201 CCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385227 3 - 5030052 CCT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3943915 3 + 3993831 CCT i proCoq1.NW_012145301v1 C 0 I 257 s otoGar3.GL873580 11228807 3 - 11315646 CCT i otoGar3.GL873580 C 0 I 122 s dasNov3.JH570353 1440540 3 - 2520184 CCT i dasNov3.JH570353 I 104 C 0 e micMur3.chr14 17504511 699 - 93316391 I e canFam3.chr16 16946578 167 - 59632846 I e mm10.chr8 86588523 3714 - 129401213 I a score=12903.000000 s hg38.chr4_KI270789v1_alt 108252 3 + 205944 CCG- s panTro5.chr4 192895616 3 + 194502333 GCG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779295 3 + 195804263 GCG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816568 3 + 4876863 GCG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705538 3 + 115148730 GTG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987729 3 + 190429646 GTG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930498 3 + 189454096 GTG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322231 3 - 25927173 GTG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351528 3 + 4669795 GTG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309618 3 + 135778131 GTG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762274 3 - 2847728 GTG- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877854 3 + 2368649 GTG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606217 3 - 190850796 GTG- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095130 2 - 14256875 -TG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990725 3 - 2196201 GTG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385230 3 - 5030052 GTG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228932 3 - 11315646 CCA- i otoGar3.GL873580 I 122 C 0 s dasNov3.JH570353 1440543 3 - 2520184 -TCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943918 257 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I e canFam3.chr16 16946578 167 - 59632846 I e mm10.chr8 86588523 3714 - 129401213 I a score=168976.000000 s hg38.chr4_KI270789v1_alt 108255 17 + 205944 TCT---------------------------------C----------CTGTCAAGTCCCT s panTro5.chr4 192895619 17 + 194502333 TCT---------------------------------C----------CTGTCAAGTCCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779298 17 + 195804263 TCT---------------------------------C----------CTGTCAAGTCCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816571 17 + 4876863 TCT---------------------------------C----------CTGTCAAGTCCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705541 17 + 115148730 TCT---------------------------------C----------CTGTCAAGTCCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987732 17 + 190429646 TCT---------------------------------C----------CTGTCAAGTCCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930501 17 + 189454096 TCT---------------------------------C----------CTGTCAAGTCCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322234 17 - 25927173 TCT---------------------------------C----------CTGTCAAGTCCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351531 17 + 4669795 TCT---------------------------------C----------CTGTCAAGTCCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309621 17 + 135778131 TCT---------------------------------C----------CTGTGAAGTCCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762277 17 - 2847728 TCT---------------------------------C----------CTGTCAAGTCCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877857 17 + 2368649 TCT---------------------------------C----------CTGTCCAGTCCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606220 17 - 190850796 TCT---------------------------------C----------CTGTCTCATTCCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095132 17 - 14256875 TCT---------------------------------C----------CTGTCTCGTTCCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990728 17 - 2196201 TCC---------------------------------C----------CTGTCTCGTTCCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385233 17 - 5030052 TCC---------------------------------C----------CTGTCTCGTTCCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228935 50 - 11315646 TCTGCTCCCACCTCCCCTTTCCTAAGCTTTCTTGTGC----------CTGCCAAGTCCCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16946745 16 - 59632846 TCT---------------------------------C----------CTGCCAAGTCCT- i canFam3.chr16 I 167 C 0 s dasNov3.JH570353 1440546 27 - 2520184 TCT---------------------------------CAGCCTGCTCTCCGCCAACTCCCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943918 257 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I e mm10.chr8 86588523 3714 - 129401213 I a score=517397.000000 s hg38.chr4_KI270789v1_alt 108272 49 + 205944 TCTCCCATACCTGCGTCTC--TCATTGAAAGGGTAGTACAGAATTCAGGTT s panTro5.chr4 192895636 49 + 194502333 TCTCCCATACCTGCGTCTC--TCATTGAAAGGGTAGTACAGAATTCAGGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779315 49 + 195804263 TCTCCCATACCTGCGTCTC--TCATTGAAAGGGTAGTACAGAATTCAGGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816588 49 + 4876863 TCTCCCATACCTGCGTCTC--TCATTGAAAGGGTAGTACAGAATTCAGGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705558 49 + 115148730 TCTCCCAGACCTGCTTCTC--TCACTGAAAGGGTAGTACAGAATTCAGGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987749 49 + 190429646 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930518 49 + 189454096 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322251 49 - 25927173 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351548 49 + 4669795 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309638 49 + 135778131 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762294 49 - 2847728 TCTCCCAGACATGCGTCTC--TCATTGAAAGGGTAGGAAAGAATTCGGGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877874 48 + 2368649 TCTCCCGGACATGCGTTTC--TCATTGAAA-GGTAGGAAAGAATTCAGGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606237 51 - 190850796 TCTCCCAGAACTGCGTCCTTCTCATTGAAAGGGTGGGAACGAGTTCAGGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095149 51 - 14256875 TCTCCTAGACCTGCATCCTTCTCATTGAAAGGATGGGAAGGAATTCAGTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990745 51 - 2196201 TCTCCCAGACCTGCGTCCTTCTCATTGAAAGGGCGGGAAAGAATTCAGGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385250 49 - 5030052 TCTCCCGGAACTGCGTCCT--TCATTGAAAGGGTGGGAAAGAATTCAGGTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11228985 51 - 11315646 CCTTCCAGATCTATGTCCCTTTAATTAAAGGAGTAGGAAGGAATTCAGGGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592237 48 - 129401213 TCTTCCAAGTCTGCATCTC--TGACTACAAGAGCAAGTGTGATTTTTG-TC i mm10.chr8 I 3714 C 0 s canFam3.chr16 16946761 49 - 59632846 --TCTAGGATCTTTATCCCTCTAATTGAAAGGATAGAAAAGAATTCAGGTT i canFam3.chr16 C 0 I 403 s dasNov3.JH570353 1440573 39 - 2520184 TCTTCCAG--CTATCTCGC--TAACTGCAAGGGTAAGAAAGAA-------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943918 257 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I a score=193930.000000 s hg38.chr4_KI270789v1_alt 108321 21 + 205944 GGGACCAACCCGTGTAACCAG s panTro5.chr4 192895685 21 + 194502333 GGGACCAGCCCGTGTAACCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779364 21 + 195804263 GGGACCAGCCCATGTAACCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816637 21 + 4876863 GGGACCAGCCCGTGTAACCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705607 20 + 115148730 GGGACCAGCCCGTGTAA-CAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987798 21 + 190429646 GGGACCAGTCTGTGTAACCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930567 21 + 189454096 GGGACCAGTCTGTGTAACCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322300 21 - 25927173 GGGACCAGTCTGTGTAACCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351597 21 + 4669795 GGGACCAGTCCGTGTAACCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309687 21 + 135778131 GGGACCAGCCCGTGTAACCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762343 21 - 2847728 GGGACCAGTCCGTGTAACCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877922 21 + 2368649 GGGACCAGCCCGTGTAACCAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606288 21 - 190850796 GGGACCGGTCTGTGAGACCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095200 21 - 14256875 GGGACCAGTCCGTGAGACCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990796 21 - 2196201 GGGACCCGTCCGTGAGACCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385299 21 - 5030052 GGGACCAGTCCGTGAGACCAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11229036 14 - 11315646 GCAACCAGTCCAT-------G i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592285 17 - 129401213 ATGATAAGCCTGTCTTA---- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1440612 11 - 2520184 ----------CGTGTTGCCTG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943918 257 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I e canFam3.chr16 16946810 403 - 59632846 I a score=92875.000000 s hg38.chr4_KI270789v1_alt 108342 15 + 205944 CAGTGATAACTAGTC s panTro5.chr4 192895706 15 + 194502333 CAGTGATAACTAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779385 15 + 195804263 CAGTGATAACTAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816658 15 + 4876863 CAGTGATAACTAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705627 15 + 115148730 CAGTGATAACTAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987819 15 + 190429646 CAGTGATAACTACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930588 15 + 189454096 CAGTGATAACTACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322321 15 - 25927173 CAGTGATAACTACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351618 15 + 4669795 CAGTGGTAACTACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309708 15 + 135778131 CAGTGATAACTACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762364 15 - 2847728 CAGTGGTAACTACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877943 15 + 2368649 CAGTGATAACTACTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606309 7 - 190850796 TGGTGAC-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095221 7 - 14256875 TGGTGAC-------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990817 7 - 2196201 TGGTGAC-------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385320 7 - 5030052 TGGTGAC-------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11229050 15 - 11315646 CGGTGACAACTAGCT i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86592302 12 - 129401213 ---TGATGACTAACT i mm10.chr8 C 0 I 1 s canFam3.chr16 16947213 15 - 59632846 CAGGGATAAATAGGT i canFam3.chr16 I 403 I 1 s dasNov3.JH570353 1440623 15 - 2520184 CAGTAACCACTGGCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3943918 257 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I a score=566135.000000 s hg38.chr4_KI270789v1_alt 108357 48 + 205944 GCTTTATTCCTGAAAACTCCAGGCTGTGATTACATAAGCACAGGTGAA s panTro5.chr4 192895721 48 + 194502333 GCTTTATTCCTGAAAACTCCAGGCTGTGATTACATAAGCACAGGTGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779400 48 + 195804263 GCTTTATTCCTGAAAACTCCAGGCTGTGATTACATAAGCACAGGTGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816673 48 + 4876863 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACATAAGCACAGGTGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705642 48 + 115148730 GCTTTACTCCTATAAACTCTAGGCTGTGATTACATAAGCACAGGTGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987834 48 + 190429646 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930603 48 + 189454096 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322336 48 - 25927173 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351633 48 + 4669795 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309723 48 + 135778131 ACTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762379 48 - 2847728 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 877958 48 + 2368649 GCTTTATTCCTAAAAACTCCAGGCTGTGATTACAGAAGCACAGGTGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606316 34 - 190850796 --------------AACTCCAGGCTGTGATTACCTAAGCACAGGGGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095228 34 - 14256875 --------------AACTCCAGGCTGTGATTACCGAAGCGCAGGGGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990824 34 - 2196201 --------------AACTCCAGGCTGTGCTTACCTAAGCGCAGGGGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385327 34 - 5030052 --------------AACTCCAGGCTGTGATTACCTAAGCACAGGGGAA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3944175 48 + 3993831 GCTTTGTTCCTGAAAACTTCAGGCTGAAATTATATAAGTACAGGTGAA i proCoq1.NW_012145301v1 I 257 I 289 s otoGar3.GL873580 11229066 48 - 11315646 GCTTTGTCCCTGAAAATTCCAGGCTGAAGTTATAAAAGCACAGGTGAA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86592315 42 - 129401213 ACTCTGATCCTA--AATTCCAGGCCAAATTTATGGAG----AGGATAA i mm10.chr8 I 1 C 0 s canFam3.chr16 16947229 47 - 59632846 GGTTTATTTCTCAAAGGTTCAGGCCTTAATC-CATAAGCATAGGTGAA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1440638 45 - 2520184 --TTTTGTCCTAGAAATTCCAGTCT-TAATTGTATAAACACAGATGAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17504511 699 - 93316391 I a score=2379970.000000 s hg38.chr4_KI270789v1_alt 108405 270 + 205944 T-GGGGAAAAGCAAAAGCCATGGAGG-----------------AAATCCA-CCTGCGCTTTCTTC----CCCCT-G---CCAGCCCAGCTTTCACCCAGGACTGTTCTTCATGGGCTGCACGCCTCTTGCCACTGGT--ATTCTTAA-GCAAGTGCTGGGAAGACTCGAAAGAAAAGTGTGAGAGGAGCAG--CAGGCAGCGGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCCTATGG-TTTTG---CCCCGAA-AGAGGACAGAGACTTCACTTTACTGAGTCTGTACAA---------ACATCTGGAA s panTro5.chr4 192895769 270 + 194502333 T-GGGGAAAAGCAAAAGCCATGGAGG-----------------AAATCCA-CCTGCGCTTTCTTC----CCCCG-G---CCAGCCCAGCTTTCACCCAGGACTGTTCTTCATGGGCTGCACGCCTCTTGCCACTGGC--ATTCTTAA-GCAAGTGCTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAG--CAGGCAGCGGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCCTATGG-TTTTG---TCCCGAA-AGAGGACAGAGACTTCACTTTACTGAGTCTGTACAA---------ACATCCGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779448 270 + 195804263 T-GGGGAAAAGCAAAAGCCATGGAGG-----------------AAATCCA-CCTGCGCTTTCTTC----CCCCG-G---CCAGCCCAGCTTTCACCCAGGACTGTTCTTCATGGGCTGCACGCCTCTTGCCACTGGC--ATTCTTAA-GCAAGTGCTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAG--CAGGCAGCGGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCCTATGG-TTTTG---TCCCGAA-AGAGGACAGAGACTTCACTTTACTGAGTCTGTACAA---------ACATCCGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816721 273 + 4876863 T-GGGGAAAAGCAAAAGCCATGGAGG-----------------AAATCCA-CCTGCGCTTTCTTC----CCCCC-TTCCCCAGCCCAGCTTTCACCCAGGACTGTTCTTCATGGGCTGCACGCCTCTTGCCACTGGC--ATTCTTAA-GCAAGTGCTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAG--CAGGCAGCGGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCCTATGG-TTTTG---CCCCGAA-AGAGGACAGAGACTTCACTTTACTGAGTCTGTACAA---------ACATCCGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705690 270 + 115148730 T-GGGGAAAAGCAAAAGCCATGGAGG-----------------AAATCCACCCTGCGCTTTCTTC----CCCCA-----CCAGCCCAGCTTTCACCCAGGACTGTTCTTCATGGGCTGCATGCCTCTTGCCACTGGC--ATTCTTAA-GCAAGTGCTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAA--CAGGCAGCGGGTTTGGG-GAGGAACGAAAAGCAGAGATGGAGAATCCTATGG-TTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTGAGTCTGTGCAA---------ACATCCGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188987882 286 + 190429646 T-GGGGAAAAGCAAAAGGAATGGAGG--AAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCTGA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGAAAAGCGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCTTACGGTTTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTAAGTCTGTTGAA---------ACATCCGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930651 288 + 189454096 T-GGGGAAAAGCAAAAGGAATGGAGGAAAAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCTGA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGAAAAGCGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCTTATGGTTTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTAAGTCTGTTCAA---------ACATCCGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322384 288 - 25927173 T-GGGGAAAAGCAAAAGGAATGGAGGAAAAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCTGA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGAAAAGCGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCTTATGGTTTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTAAGTCTGTTCAA---------ACATCCGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351681 286 + 4669795 T-GGGGAAAAGCAAAAGGAATGGAGG-AAAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCCGA-----CCAGTCCAGCTTTCACCCAGGACTGTTTTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGGAAAGTGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCTTATGA-TTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTCACTAAGTCTGTTCAA---------ACATCCGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134309771 287 + 135778131 TGGGGGAAAAGCAAAAGGAATGGAGG-AAAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCCGA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGATGGACAATCTTATGG-TTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTAAGTCTGTTCAA---------ACATCCGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762427 285 - 2847728 T-GGGGAAAAGCAAAAGGAATGGAGG--AAAAAAAAATGGAGGAAATACATCCTGCGCTTTCTTC----CCCGA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTGTTGCCACTGGC--ATTCTTAG-GCAAGTACTGGGAAGACTCGAAAGAAAAGTGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAAAAGCAGAGACGGACAATCTTACGG-TTTTG---CCCTGAA-AGAGGACAGAGACTTCACTTTACTAAGTCTGTTCAA---------ACATCCGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878006 270 + 2368649 T-GCGGAAAAGCAAAAGCCATGGAGG-----------------AGATACATTCTGCGCTTTCTTC----CGCAA-----CCAGTCCAGCTTTCACCCAGGACTGTTCTTCATGGGATGCACGCCTCTTGCCACTGGC--ATTCTTAG-GCAAGCACTGGGAAGACTTGAAAGAAAAGTGTCAGAGGAGCAA--CAGGCAGCAGGTTTGGG-GAGGAATGAGAAGCAGAGATGGACAATCTTACGG-TTTTG---CCCTGAA-AGAAGACAGACACTTCACTTTACTAAGTCTGTTCAA---------ACATCCGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606350 230 - 190850796 T-GGG-------------------GG-----------------AAACGCA-CACATGCTGTTCTC----CTCC------CGCATCCAGCTTCCACCCAGGGCTTCTCTTCACGCGACACACTCCGCTTGCCATTGGT--ATTCTTAA-GCAAGCGCTGGGAAGACTTGAAAG-----TGTCAGAGGAGCAG--CGGGCAGTGGGTTTAGGTGAGGAGGGAAGAGCAGACATGGACAGTCTTACC--GTTTG---CCCTG--------------ACTTCACTTTATTGAGTCTTTTTAA---------ACGTC-GGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095262 249 - 14256875 T-GGGGAAAACCGACAGCCATGGAGG-----------------AAACGCG-CACACGCTGTTCTC----CTCC------CCCATCCAGCTTTCACCCTGGGCTCCTCTTCATGCAAT-CGGTCCGCTTGCCTTTGGT--ATTCTTAA-GCAAGCACTGGGAAGACTTGGAAG-----TGTCAGAAGAGCGA--TGGGCAGTGGGTTTAGGTGAGGTGTGAAGAGCAGAGATGGACAATCTTACCT-TTTTG---CCCTG--------------ATTTCACTTTATTGAGTCTTTTTAA---------ACATT-GGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 990858 247 - 2196201 T-GGGGAAAACCGACAGCCAAGGAGG-----------------AAACGCA-CACACGCTGCTCTC----CGCC------CCCATCCAGCTTTCACCCAGGGCTTCTCTTCATGTGAC-CACTCCGCTCGCCATTGGT--ATTATTAA-GCAAGCGGTGGGAAGACGTGAAAG-----TGTCAGAGGAGCAA--CGGGCAGTGGGTTTAGGTGAGGCGTG--GAGCAGAGATGGACAATCCTACCG-CTTTG---CCCTG--------------ACGTCACTTTACTGAGTCTTTTTAA---------ACGCC-GGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385361 255 - 5030052 T-GGGGAAAACCGAAAGCCAAGAAGG-----------------AAACGCA-CACATGCTGTTCTC----CTCC------CACTTCCGGCTTTCACCCAGGGCTTCTCTTCATGCGACGCACTCCGCTTGCCATTGGT--ATTCTTAA-GCAAGCGCTGGGAAGACTTGAAAGGAAAATGTCAGAGGAGCAA--CGGGCAGTGGGTTTAGGTGAGGAGTGAAGAGCAGAGATGGACAGTCCTACCG-TTTTG---CCCTG--------------ACTTCACTTTATTGAGTCTTTTTAA---------ACGTC-GGAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11229114 263 - 11315646 T-GAGGAAGACCACATGTCAC-CAGG-----------------ACACGCA-CCTATGTCTCCCTT----CCTCC-----CACATCCAGCTCGTACCCA-GACCTTTCACCATGGGATGTGCTCTTTTTGCCATCAGT--GTTTTTAT-GCAAGTCCTGGACAGACTTGAAAAGGGGATTTCAAAGGAGCAA--CGTGCAACAGGTTTGGGTGAAGGGTGGAAAGTAGTGGTGGGCAGAGCTGCCC---------ACCCAGG-AGAGGTGAGAAATGACATTTTGGGGGGTCTTGTCAA---------GCATCTGGAA i otoGar3.GL873580 C 0 I 24 s mm10.chr8 86592357 263 - 129401213 T-TAGGAAAACCCAAAGTCACTGAG------------------ACATGGACCCTGTATTTACTGC----CTCCCTG---CCACCCCAGTTTCCACTCAGCACC-TTCTCTGAAGGATGCCCTCCTGTTGACATTGGC--ATTTTTAATGTAGGTGCTGCAAAGAACTGAAAGAGAAGC-TCAAAATTGCTG--TGCCAAGCAAACTGGGC-AAGAGGTAGAAAACAGAGAATGCCAGCTTCATGG-TTTTGATTACTTG-----AGGTCAAATATTTCTCTT------GCACATTCAG---------GCATGCAGTG i mm10.chr8 C 0 I 6 s canFam3.chr16 16947276 258 - 59632846 T-GAGGAAGAGCAAAAGCCACAGAGG-----------------ATATCCA-CCTGT-CTTTCCTA----CCTA------CCATCTCAGCACATATCCAAGACCTTTCCTGATGGCATGTACTACTCTT--------------------GCATATGCTATTCAGACTTGAAACAAA--TTTCAAAGGAGCAACTCATGAAGCAGGTTTGGG-TGAGGGTAGAAAGCAGAGACAGGCTTTTTAGAAG-TTTTG---CCTTGGA-AGAGGTCAGATACTTCACTA-GTTGGGTGTTTTCAGCTAGCCAGCACATCTGGTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440683 255 - 2520184 --TGGGCAAAACCGAGGCTGTGGAGG-----------------CACCAC--CCCATGCTCTCCTTGTTGCCCCA-----TCACTCCAGTGGATATCCCGGGCCACCCTCTGAGGGATGCACCCCTTTTGCCATCAACTGGATAGCTG-CCAAATCCTTGGCAGACTTGGATGGGAAATTCCA--------A--AGAGCAGCAGGTTTGGGGGAAGAGTGGAAAGTAGAAACGG----TTTTCTTG-TTTCC---CCCTGGGTGGAAATCAGAGACTTCACTCTACTGAGCCACTGTGA---------AG-------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944223 289 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I a score=-46359.000000 s hg38.chr4_KI270789v1_alt 108675 16 + 205944 TCAAA-----GCCAA----------------GAGAAT s panTro5.chr4 192896039 16 + 194502333 TCAAA-----GCCAA----------------GAGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779718 16 + 195804263 TCAAA-----GCCAA----------------GAGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3816994 16 + 4876863 TCAAA-----GCCAA----------------GAGAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705960 16 + 115148730 TCAAA-----GCCAA----------------GAGAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988168 14 + 190429646 TCAAA-----GCC------------------GAGAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930939 14 + 189454096 TCAAA-----GCC------------------GAGAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322672 14 - 25927173 TCAAA-----GCC------------------AAGAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351967 13 + 4669795 TCAAA-----GCT------------------GAG-AC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310058 13 + 135778131 TCAAA------CC------------------GAGAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762712 14 - 2847728 TCAAA-----GCC------------------GAGAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878276 16 + 2368649 TCAAA-----GCCAA----------------GAGAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606580 31 - 190850796 TCAAACATTTAAGACGTT------CCTTGTCTCCACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095511 26 - 14256875 TCAAA-----GCCAGCTT------CCTTGTCTCCACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991105 26 - 2196201 TCAAA-----GCCAGCTT------CCTTGTCTCCACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385616 26 - 5030052 TCAAA-----GCCAGCTT------CCTTGTCTCCATT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86592626 19 - 129401213 GCAAA-----TTCTATTT------CTCCCT------- i mm10.chr8 I 6 C 0 s canFam3.chr16 16947534 25 - 59632846 CTGAA-----GGCAACTTTCTCTCTCTTCT------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440938 9 - 2520184 CCAAC-----TTCT----------------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944223 289 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I e otoGar3.GL873580 11229377 24 - 11315646 I a score=89123.000000 s hg38.chr4_KI270789v1_alt 108691 9 + 205944 GACTGCGAT-- s panTro5.chr4 192896055 9 + 194502333 GACTGTGAT-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779734 9 + 195804263 GACTCTGAT-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817010 9 + 4876863 GACTGCGAT-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705976 9 + 115148730 GACTGTGAT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988182 9 + 190429646 GGCTGTGAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930953 9 + 189454096 GGCTGTGAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322686 9 - 25927173 GGCTGTGAT-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351980 9 + 4669795 GGCTGTGAT-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310071 9 + 135778131 GGCTGTGAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762726 9 - 2847728 GGCTGTGAT-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878292 9 + 2368649 GGCTGTGAT-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606611 9 - 190850796 GGCTTTGAT-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095537 9 - 14256875 GGCTATGAT-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991131 9 - 2196201 GTCTATGAC-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385642 9 - 5030052 GGCTATGAT-- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11229401 9 - 11315646 GGCCATGAG-- i otoGar3.GL873580 I 24 C 0 s mm10.chr8 86592645 9 - 129401213 AGCTACGGT-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16947559 9 - 59632846 GGCTCTAAT-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440947 9 - 2520184 --GTGTGAGAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944223 289 + 3993831 I e micMur3.chr14 17504511 699 - 93316391 I a score=1708135.000000 s hg38.chr4_KI270789v1_alt 108700 123 + 205944 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTATGCTCCTAGAAAGAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCTATTTCTCATGAAAAGTGAGGTTAAAGGTTAAT s panTro5.chr4 192896064 123 + 194502333 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTATGCTCCTAGAAAGAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTATCCATTTCTCATGAAAAGTGAGGTTAAAGGTTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779743 123 + 195804263 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTATGCTCCTAGAAAGAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTATCCATTTCTCATGAAAAGTGAGGTTAAAGGTTAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817019 123 + 4876863 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTATGCTCCTAGAAAGAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCATTTCTCATGAAAAGTGAGGTTAAAGGTTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112705985 86 + 115148730 CTAAGCCTTTCTCTATGCCCCAAGTT-TACAGCAGTTTATGCTCCTAGAAAG----------------------------------------TCCATTTCTCATGAAAAGTGAGGTTAAAGGTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988191 123 + 190429646 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTGCTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187930962 123 + 189454096 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTGCTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322695 123 - 25927173 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTGCTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3351989 123 + 4669795 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTGCTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310080 123 + 135778131 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTACTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762735 123 - 2847728 CTAAGCCTTTCTCTAGGCCCCAAGTT-TACAGCAGTTTGTGCTCCTAGAAAAAGAATAATCACTGCATTTACCCAACTAAA---TATTCCTGTCCCTTTCTCATGAAAAGTGAGGTTAAAGATTAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878301 123 + 2368649 CTAAGCCTTTCTCTAAGCCCCAAGTT-TACAGCAGTTTGTGCTCCTCGGAAGAGAACAATCACTGCATTTACCCAACTAAA---TATTTCTGTCCCTTTCTCGTGAAAAGTGAGGTTAAAGATTAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606620 118 - 190850796 CTAAGCCTTCCTCTAGGCCCCGAGTT-TACAGGAGTTTGTGCTCCCAGAAAGAGAATAATCACTGTACTCACCCGAC--------ATTCCTGTCCGTTTTTCATGAAAAGTGAGGTTAAAGGTTAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095546 123 - 14256875 CTAAGCCTTCCTCTAGGCCCCGAGTT-TACAGGAGTTTGTGCTCCCAGAAAGAGAATAATCACGGTATTCACCCAGCTAAG---TATTTCTGTCCATTTGTCATGAAAAGTGAGGTTAAAGGTTAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991140 122 - 2196201 CTAAGTCTTCTTCTAGGCCCCGAGTT-TACAGGAGTTTGTGCTCCCAGAAAGAGAATAATCACTGTATTCACCC-ACTAAG---TATTTCTGTCCATTTGTCATGAAAAGTGAGTTTAAAGGTTAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385651 123 - 5030052 CTAAGCCTTCCTCTAGGCCCCAAGTT-TACAGGAGTTTGTGTTCCCAGAAAGAGAATAATCACTGTATTCACCCAACTAAG---TATTTCTGTCCATTTTTCATGAAAAGTGAGGTTAAAGGTTAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505210 127 - 93316391 CTAAGCCTTTCTCTAGGCACTGGGTTCTACGGCAGTTTATGCTTCTAAAAAGAGAGAAATCACCATATTCACTCACCTAAATGATATTTCTGTCCATTCCTCATGAAAAGTGATGTTAAAGGTTAAT i micMur3.chr14 I 699 C 0 s proCoq1.NW_012145301v1 3944512 126 + 3993831 CTAAGCCTTTCTCTAGGCACTGGGTTCTACAGCAATTTATGCTCCTAGAAAGAGAGAAATCACCATATTCACACACCTGAATGATA-TTCTGTCCATACCTCATGAAAAGTGATGTTAAAGGTTAAT i proCoq1.NW_012145301v1 I 289 I 101 s otoGar3.GL873580 11229410 126 - 11315646 CTAAGGTTTTCTCCAGTC-CCGGGTTCTACAGCAGTTTGTGCTTCTAGAAAGAGAGAAACCACCATATTCATGCACCGAGATGGTGTTTCTGTCTGTATCCCTTGAAAAGCAATGTTAAAGGTTAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592654 115 - 129401213 CTGTGTCTTTCCCTTGGCACCACATT---CTAAAATTTGTACTTCTTGGGAGAAAGTAATCACCATATTTACCCACCTGGATAATACTTCAGCCTATATATTATTAAAAT--AAGTTAAA------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16947568 127 - 59632846 CTAAGCTTTCCCCTAGGCACGATGTTCTACAGCAGTTTGTGCTCTTAGAAAGAGAGCAATCACTGTGTTTGCCTACTTGAATAATTTTTCTGTCTCTCTCTTGTTACAAGTGAGGTTAGAAGTTAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1440956 117 - 2520184 CTCATCCTCCCTCTTGGCACCGTGTCCTACGGCAGTTCATGCCCCTGGGAA-------ATCAGCACGTTCACCCCCCTGAGTAGCCCTTCTGTCTTCTCTT--TGCAGAGGGAGGTTGAAG-TTAAT i dasNov3.JH570353 C 0 C 0 a score=849499.000000 s hg38.chr4_KI270789v1_alt 108823 83 + 205944 GTAAGACCATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCAGC-TT----TGAA-A----------TTGT---CATACCTTTTTTA--------------CTTA-----------TCCA-------- s panTro5.chr4 192896187 84 + 194502333 GTAAGAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCTAGC-TT----TGAACG----------TTGT---CATACCTTTTTTA--------------CTTA-----------TCCA-------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779866 84 + 195804263 GTAAGAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCTAGC-TT----TGAACG----------TTGT---CATACCTTTTTTA--------------CTTA-----------TCCA-------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817142 84 + 4876863 GTAAGAACGTTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCAGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTTA-----------TACA-------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706071 124 + 115148730 GTAAGAACATCGCAGCCCATAAATTTAGGATGACTGTATAATCCTTCCAGCTTAGCCCATAAATTT-AGGATGACTGTATAATCCTTCCAGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TCCA-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988314 84 + 190429646 GTAAAAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931085 84 + 189454096 GTAAAAACATTGCAGCCCATAAAT----------------------------------------TT-AGGGTAACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322818 84 - 25927173 GTAAAAACATTGTAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352112 84 + 4669795 GTAAAAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310203 84 + 135778131 GTAAAAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCTTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762858 84 - 2847728 GTAAAAACATTGCAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878424 84 + 2368649 GTAAAAACATTGTAGCCCATAAAT----------------------------------------TT-AGGATGACTGTATAATCCTTCCTGC-TT----TGAACA----------TTGT---CATACCTTTTTTA--------------CTCA-----------TTCA-------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606738 84 - 190850796 GTAGGAACACTGTAACCCATGCAT----------------------------------------TT-AGAATGACCGTATGATGCTTCCAAC-TC----TGAGCA----------CTGT---CGTACCTCTTTCA--------------CTGC-----------TTGA-------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095669 82 - 14256875 GTAAGAACATTGTAACCCGTACAT----------------------------------------CT-AGAATGACTGTATAATCCTTCCAAC-GT----TGAACA----------TTGT---CGTACCTCTT--A--------------CTAC-----------TTCA-------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991262 82 - 2196201 GTAAGAACATTGCAACCCGTACAT----------------------------------------TT-AGAATGACTGTATAATCCTTCCAAC-TT----CGAACA----------CTGT---CTTACCTCTT--A--------------CTAC-----------TTCA-------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385774 84 - 5030052 GTAAGAACATTGTAACCCATACAT----------------------------------------TT-AGAATGACTGTATAATCCTTCCAAC-TT----TGAACA----------CTGT---CGTACCTCTTTTA--------------CTGC-----------TTCA-------- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505337 98 - 93316391 ATGAGAACATCATAACCCTAAAAT----------------------------------------CC-AAGATGACTATATAATCCTCCCAGCTTT-GGATGAACA----------TTTT---CATACCATTTTTA----CTCTATTTTACTCC-----------TCCA-------- i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11229536 98 - 11315646 ATGAGAACATCATGACCCTTAAAA----------------------------------------CC-AAGATG---ATGCAACCCTCCCAGC-TT-GGATGAATG----------TTTT---TGCACCATTTTTACTTTCTTTATTTCACTCC-----------TCCA-------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592769 99 - 129401213 GTATGACCACTGTACTCCTTAATT----------------------------------------CCGAGGTTGGCTGTTTAAGCCTCCCAGC-CTTTGATAAGCA----------CTG----CAAGCCTTTTTGA--------------GTCAGTGCCCTTTGCTTCA-------- i mm10.chr8 C 0 I 13 s canFam3.chr16 16947695 98 - 59632846 -GAAGGACATTGTGATCCTTAACT----------------------------------------CC-AGCGTGACTATACTATCTTCTTAAC-TG----TGGACAAACACCTCCTTTGTCTGCATACTTTATTTC--------------CTGTAT---------TTCA-------- i canFam3.chr16 C 0 I 8 s dasNov3.JH570353 1441073 102 - 2520184 GGGAGAACATCATCATCT-TAACT----------------------------------------CC-ACGGTGACTCTAGTACGCTCCCAGC-TTCTGAGGAACA----------CGCA---CGTGCCCTCTTTC-------GACTTCCTTTA-----------TTCACTATTACC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944638 101 + 3993831 I a score=228288.000000 s hg38.chr4_KI270789v1_alt 108906 12 + 205944 AAATATTTCTAA s panTro5.chr4 192896271 12 + 194502333 AAATATTTCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779950 12 + 195804263 AAATATTTCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817226 12 + 4876863 AAATATTTCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706195 12 + 115148730 AAATATTTCTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988398 12 + 190429646 AAATATTTCTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931169 12 + 189454096 AAATATTTCTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322902 12 - 25927173 AAATATTTCTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352196 12 + 4669795 AAATATTTCTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310287 12 + 135778131 AAATATTTCTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762942 12 - 2847728 AAATATTTCTAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878508 12 + 2368649 AAATATTTCTAA i colAng1.NW_012116221v1 C 0 I 301 s calJac3.chr3 189606822 12 - 190850796 AAATATTTCTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095751 12 - 14256875 AAATATTTCTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991344 12 - 2196201 AAATATTTCTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385858 12 - 5030052 AAATATTTCTAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505435 12 - 93316391 AAATATTTCTCA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3944739 12 + 3993831 AAATATTTCTAA i proCoq1.NW_012145301v1 I 101 C 0 s otoGar3.GL873580 11229634 10 - 11315646 AAATATTTCT-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592881 12 - 129401213 AAATATTTCTAA i mm10.chr8 I 13 C 0 s canFam3.chr16 16947801 12 - 59632846 AAGTATTTCTCA i canFam3.chr16 I 8 C 0 s dasNov3.JH570353 1441175 12 - 2520184 AAATATTTCTGA i dasNov3.JH570353 C 0 C 0 a score=442914.000000 s hg38.chr4_KI270789v1_alt 108918 25 + 205944 AAACAACAGAAAGGTCTTGACAACC s panTro5.chr4 192896283 25 + 194502333 AAACAACAGAAAGGTCTTGACAACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779962 25 + 195804263 AAACAACAGAAAGGTCTTGACAACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817238 25 + 4876863 AAACAACAGAAAGGTCTTGACAACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706207 25 + 115148730 AAACAACAGAAAGGTCTTGACAACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988410 25 + 190429646 AAACAACGGAAAGGTCTTGACAACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931181 25 + 189454096 AAACAACGGAAAGGTCTTGACAACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322914 25 - 25927173 AAACAACAGAAAGGTCTTGACAACC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352208 25 + 4669795 AAACAACAGAAAGGTCTTGACAACC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310299 25 + 135778131 AAACAATAGAAAGGTCTTGACAACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762954 25 - 2847728 AAACAACAGAAAGGTCTTGACAACC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878821 25 + 2368649 AAACAACAGAAAGGTCTTGACAACC i colAng1.NW_012116221v1 I 301 C 0 s calJac3.chr3 189606834 22 - 190850796 G---AACAGAAAGGTCTTGACAACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095763 25 - 14256875 GAACAACAGAAAGGTCTTGACAACC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991356 25 - 2196201 GAACAACAGAAAGGTCTTGACAACC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385870 25 - 5030052 GAACAACAGAAAGGTCTTCACAACC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505447 25 - 93316391 CAACAACAGAAAGGTCTTGACAACC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3944751 25 + 3993831 CAACAACAGAAAGGTCTTGACAACC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11229644 24 - 11315646 -AAGAGCAGAAAGGTCTTGACAACC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592893 25 - 129401213 AAAGAACAGAGCAGTCTCGATAGCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16947813 25 - 59632846 GAAGAACAGAAAGGTCTTGACAACC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1441187 25 - 2520184 GGCTAAAAGAAAGGTTTTGACACTC i dasNov3.JH570353 C 0 C 0 a score=304447.000000 s hg38.chr4_KI270789v1_alt 108943 29 + 205944 TTGATGACTTTATGGAATGTGAGATAAAG s panTro5.chr4 192896308 29 + 194502333 TTGATGACTTTATGGAATGTGAGATAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192779987 29 + 195804263 TTGATGACTTTATGGAATGTGAGATAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817263 29 + 4876863 TTGATGACTTTATGGAATGTGAGATAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706232 29 + 115148730 TTGATGACTTTATGGAATGTGAGATAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988435 27 + 190429646 TTGATGAC--TATGGAATGTGAGCTAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931206 27 + 189454096 TTGATGAC--TATGGAGTGTGAGCTAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322939 27 - 25927173 TTGATGAC--TATGGAATGTGAGCTAAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352233 27 + 4669795 TTGATGAC--TATGGAATGTGAGCTAAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310324 25 + 135778131 TTGATGAC----TGGAATGTGAGCTAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2762979 27 - 2847728 TTGATGAC--TATGGAATGTGAGCTAAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878846 27 + 2368649 TTGATGAC--TATGGAATGTGAGCTAAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606856 29 - 190850796 TTGACGACTTTATGTAATGTGAGATAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095788 29 - 14256875 TTGACGACTTTATGTAATGTGAGATAAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991381 29 - 2196201 TAGACGACTTTATGTAATGTGAGATAAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385895 29 - 5030052 TTGACGACTTTATGTCATGTGAGATAAAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505472 26 - 93316391 TT---GACTTTTTGTAATGTGAGATAAAG i micMur3.chr14 C 0 I 158 s proCoq1.NW_012145301v1 3944776 26 + 3993831 TT---GACTTTTTGTAATGTGAGATAAAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11229668 26 - 11315646 TT---GACTGTGAGTAATGGGAGATAAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592918 22 - 129401213 TT---GACTTTGTACAATGTGATAT---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16947838 26 - 59632846 TC---AACTGTGTGACAAGTGAGATAAAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1441212 0 - 2520184 C a score=10785.000000 s hg38.chr4_KI270789v1_alt 108972 1 + 205944 G s panTro5.chr4 192896337 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780016 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817292 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706261 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988462 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931233 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322966 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352260 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310349 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763006 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878873 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606885 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095817 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991410 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385924 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3944802 1 + 3993831 G i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11229694 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16947864 1 - 59632846 G i canFam3.chr16 C 0 I 268 e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e mm10.chr8 86592940 0 - 129401213 C a score=9378.000000 s hg38.chr4_KI270789v1_alt 108973 1 + 205944 G s panTro5.chr4 192896338 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780017 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817293 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706262 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988463 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931234 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322967 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352261 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310350 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763007 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878874 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606886 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13095818 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 991411 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3385925 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3944803 1 + 3993831 G i proCoq1.NW_012145301v1 C 0 I 98 s otoGar3.GL873580 11229695 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592940 0 - 129401213 C a score=217774.000000 s hg38.chr4_KI270789v1_alt 108974 28 + 205944 CGatatatatacacatcacata---------tacaca s panTro5.chr4 192896339 26 + 194502333 TGatatatatacacatcacata-----------caca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780018 26 + 195804263 CGatatatatacacatcacata-----------caca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817294 26 + 4876863 CGatatatatacacatcacata-----------taca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706263 37 + 115148730 CGatatatatacacatcacatatacgacacatatata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988464 28 + 190429646 CGatatatatacacatcacata---------cacaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931235 28 + 189454096 CGatatatatacacatcacata---------tacaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322968 28 - 25927173 CGatatatatacacatcacata---------cacaca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352262 28 + 4669795 CGatatatatacacatcacata---------tacaca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310351 28 + 135778131 CGATATatatacacatcacata---------tacaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763008 28 - 2847728 CGatatatatacacatcacata---------tacaca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878875 28 + 2368649 CGatatatatacacatcacata---------cacaca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189606887 27 - 190850796 CCATatatacacaca-catatg---------tacaca i calJac3.chr3 C 0 I 9 s saiBol1.JH378165 13095819 27 - 14256875 CCATatatacacaca-catata---------tacaca i saiBol1.JH378165 C 0 I 9 s cebCap1.NW_016107886v1 991412 27 - 2196201 CCATATacacacaca-cacata---------tacaca i cebCap1.NW_016107886v1 C 0 I 795 s aotNan1.NW_018492112v1 3385926 27 - 5030052 CCatatatacacaca-catata---------tacaca i aotNan1.NW_018492112v1 C 0 I 1123 e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592940 0 - 129401213 C e otoGar3.GL873580 11229696 0 - 11315646 C a score=127095.000000 s hg38.chr4_KI270789v1_alt 109002 30 + 205944 cacacatatacgt-atatatac--aca------------------------------------------tatata s panTro5.chr4 192896365 30 + 194502333 cacacatatacgt-atatatac--aca------------------------------------------tatata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780044 30 + 195804263 cacacatatacgt-atatatac--aca------------------------------------------tatata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817320 30 + 4876863 cacacacatatac-atatatac--aca------------------------------------------tatata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706300 72 + 115148730 catacatgtacac-atatatac--atacatgtatatatgtgtatatgtgtatacgtgtgcatatatatgtatata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988492 30 + 190429646 cacacacatatgc-acatatat--ata------------------------------------------tacata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931263 30 + 189454096 cacacacatatgc-acatatat--ata------------------------------------------tacata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24322996 30 - 25927173 cacacatatgcac-atatatat--ata------------------------------------------cacata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352290 32 + 4669795 cacacatatatgc-acatatatacaca------------------------------------------tacata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310379 28 + 135778131 cac--atatatgc-acatatat--ata------------------------------------------cacata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763036 26 - 2847728 cac----acatgc-acatatat--ata------------------------------------------tacata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878903 30 + 2368649 cacacatatatgc-acatatac--ata------------------------------------------catata i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189606923 31 - 190850796 catacatacacatcgtatatat--aca------------------------------------------cacacg i calJac3.chr3 I 9 C 0 s saiBol1.JH378165 13095855 31 - 14256875 catgcatacacataatatatac--aca------------------------------------------tacaca i saiBol1.JH378165 I 9 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592940 0 - 129401213 C e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I e otoGar3.GL873580 11229696 0 - 11315646 C a score=5891.000000 s hg38.chr4_KI270789v1_alt 109032 7 + 205944 tgtatat s panTro5.chr4 192896395 7 + 194502333 catatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780074 7 + 195804263 catatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817350 7 + 4876863 cgtatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706372 7 + 115148730 tgtgtat i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189606954 7 - 190850796 tatatac i calJac3.chr3 C 0 I 6 s saiBol1.JH378165 13095886 7 - 14256875 catatat i saiBol1.JH378165 C 0 I 904 s mm10.chr8 86592940 3 - 129401213 --TCT-- i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e canFam3.chr16 16947865 268 - 59632846 I e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I e colAng1.NW_012116221v1 878933 1 + 2368649 I e manLeu1.NW_012102221v1 2763062 0 - 2847728 C e chlSab2.chr7 134310407 0 + 135778131 C e cerAty1.NW_012001672v1 3352322 0 + 4669795 C e macNem1.NW_012013133v1 24323026 0 - 25927173 C e macFas5.chr5 187931293 0 + 189454096 C e rheMac8.chr5 188988522 0 + 190429646 C e otoGar3.GL873580 11229696 0 - 11315646 C a score=23240.000000 s hg38.chr4_KI270789v1_alt 109039 14 + 205944 atgtgtgcatatat s panTro5.chr4 192896402 14 + 194502333 atgtgtgcatatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780081 14 + 195804263 atgtgtgcatatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817357 14 + 4876863 atgtgtgcatatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706379 14 + 115148730 atgtgtgcatatat i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189606967 14 - 190850796 atatacacacatat i calJac3.chr3 I 6 C 0 s saiBol1.JH378165 13096797 12 - 14256875 --atgtgtatatgt i saiBol1.JH378165 I 904 C 0 s mm10.chr8 86592943 14 - 129401213 GGGTGTGCCCACAT i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e dasNov3.JH570353 1441212 0 - 2520184 C e canFam3.chr16 16947865 268 - 59632846 I e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I e colAng1.NW_012116221v1 878933 1 + 2368649 I e manLeu1.NW_012102221v1 2763062 0 - 2847728 C e chlSab2.chr7 134310407 0 + 135778131 C e cerAty1.NW_012001672v1 3352322 0 + 4669795 C e macNem1.NW_012013133v1 24323026 0 - 25927173 C e macFas5.chr5 187931293 0 + 189454096 C e rheMac8.chr5 188988522 0 + 190429646 C e otoGar3.GL873580 11229696 0 - 11315646 C a score=-113307.000000 s hg38.chr4_KI270789v1_alt 109053 38 + 205944 cta---------------------------------------------------------------------------------------tacatatatggtgtgtgtacatacatac----acac-----------cat s panTro5.chr4 192896416 38 + 194502333 cta---------------------------------------------------------------------------------------tacatatatggtgtatgtacatacatac----acac-----------cat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780095 38 + 195804263 cta---------------------------------------------------------------------------------------tacatatatggtgtatgtacatacatac----acac-----------cat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817371 38 + 4876863 cta---------------------------------------------------------------------------------------tacatatatggtgtgtgtacatacatac----acac-----------cat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706393 125 + 115148730 ctatatatatggtgtgcgtacatacatacacatcatatatacatacaggatgtgtatgtgtgtgtgtatgtatatatgtgtgcatatatctatatatatggtgtgcgtacatacatac----acat-----------cat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988522 9 + 190429646 -----------------------------------------------------------------------------------------------------------------catat----acat-------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931293 9 + 189454096 -----------------------------------------------------------------------------------------------------------------catat----acat-------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323026 9 - 25927173 -----------------------------------------------------------------------------------------------------------------catat----acat-------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352322 9 + 4669795 -----------------------------------------------------------------------------------------------------------------catat----acat-------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310407 7 + 135778131 -----------------------------------------------------------------------------------------------------------------cat------acat-------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763062 13 - 2847728 -----------------------------------------------------------------------------------------------------------------catacataaacat-------------- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189606981 32 - 190850796 gta---------------------------------------------------------------------------------------cacatatataccacata------catac----acat-----------cat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096809 43 - 14256875 gta---------------------------------------------------------------------------------------tgtatatatatgacatg------tatat----atgtgtatatatgtgtgt i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11229696 30 - 11315646 ----------------------------------------------------------------------------------------------TAAAAATTGGGTTAAAATATATA-----ATAT-----------TAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592957 18 - 129401213 TTA---------------------------------------------------------------------------------------CTCATATAAATTGTA----------------------------------- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1441212 20 - 2520184 ---------------------------------------------------------------------------------------CTATCTTTGTATGACGTGTG--------------------------------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e canFam3.chr16 16947865 268 - 59632846 I e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I e colAng1.NW_012116221v1 878933 1 + 2368649 I a score=86737.000000 s hg38.chr4_KI270789v1_alt 109091 10 + 205944 atatacacac s panTro5.chr4 192896454 10 + 194502333 atatacacac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780133 10 + 195804263 atatacacac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817409 10 + 4876863 atatacacac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706518 10 + 115148730 atatacacac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988531 10 + 190429646 atatacacac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931302 10 + 189454096 atatacacac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323035 10 - 25927173 atatacacac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352331 10 + 4669795 atatacacac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310414 10 + 135778131 atatacacac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763075 10 - 2847728 atatacacac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878934 10 + 2368649 atatatacac i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189607013 10 - 190850796 atatatacac i calJac3.chr3 C 0 I 1906 s saiBol1.JH378165 13096852 10 - 14256875 atgtatatat i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11229726 10 - 11315646 ACATACATAC i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1441232 8 - 2520184 --ATTCATAA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592975 0 - 129401213 C e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I a score=633.000000 s hg38.chr4_KI270789v1_alt 109101 2 + 205944 ag s panTro5.chr4 192896464 2 + 194502333 ag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780143 2 + 195804263 ag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817419 2 + 4876863 ag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706528 2 + 115148730 ag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988541 2 + 190429646 ac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931312 2 + 189454096 ac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323045 2 - 25927173 ac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352341 2 + 4669795 ac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310424 2 + 135778131 ac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763085 2 - 2847728 ac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878944 2 + 2368649 aT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189608929 2 - 190850796 AT i calJac3.chr3 I 1906 C 0 s saiBol1.JH378165 13096862 2 - 14256875 at i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11229736 1 - 11315646 A- i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1441240 2 - 2520184 AG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 991439 795 - 2196201 I e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592975 0 - 129401213 C e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I a score=88265.000000 s hg38.chr4_KI270789v1_alt 109103 22 + 205944 gatgtgtatgtgtgtgcgt------ata s panTro5.chr4 192896466 28 + 194502333 gatgtgtatgtgtgtgtgtgtgtatata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780145 24 + 195804263 gatgtgtatgtgtgtgtgtgt----ata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817421 28 + 4876863 gatgtgtatgtgtgtgtgtgtgtatata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706530 20 + 115148730 gatgtgtatgtgtgtgtgt--------a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988543 26 + 190429646 Gatgtgtatgtgtgtgtgcatgt--gta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931314 26 + 189454096 gatgtgtatgtgtgtgtgcatgt--gta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323047 26 - 25927173 gatgtgtatgtgtgtgtgcatgt--gta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352343 26 + 4669795 gatgtgtatgtgtgtgtgcatgt--gta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310426 26 + 135778131 GAtgtgtgtgtgtgtgtgtatgt--gta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763087 26 - 2847728 gatgtgtatgtgtgtgtgcatgt--gta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878946 22 + 2368649 GATG----TGTGTGTGTGCATGT--GCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189608931 21 - 190850796 GAAGTCTATGCGTGT-CATGCA------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096864 22 - 14256875 gatgtttatgtatgtgcatgca------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 992234 22 - 2196201 gatgtttatgtatgtgcatgca------ i cebCap1.NW_016107886v1 I 795 C 0 s dasNov3.JH570353 1441242 10 - 2520184 GGTGAATATT------------------ i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e canFam3.chr16 16947865 268 - 59632846 I e mm10.chr8 86592975 0 - 129401213 C e aotNan1.NW_018492112v1 3385953 1123 - 5030052 I e otoGar3.GL873580 11229737 0 - 11315646 C a score=482422.000000 s hg38.chr4_KI270789v1_alt 109125 55 + 205944 tatatattacatctatttac--atatatatataACATTTCCTTTGATTCAATTTGCA s panTro5.chr4 192896494 53 + 194502333 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCAATTTGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780169 53 + 195804263 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCAATTTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817449 52 + 4876863 tatatattatatctatttac--atatatata--ACATTTCCTTTGATTCGATTT-CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706550 53 + 115148730 tatatattacatctatttac--atatatata--atatTTCCTTTGATTCGATTTGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988569 53 + 190429646 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCGATTTGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931340 53 + 189454096 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCGATTTGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323073 53 - 25927173 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCGATTTGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352369 55 + 4669795 tatatattacatctatttacatatatatata--ACATTTCCTTTGATTTGATTTGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310452 53 + 135778131 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCGATTTGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763113 53 - 2847728 tatatattacatctatttac--atatatata--ACATTTCCTTTGATTCGATTTGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 878968 53 + 2368649 TGTATATTACATCTATTTAC--ATATATATA--ACATTTCCTTTGATTCGATTTGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189608952 53 - 190850796 TATATACCACATGGATTTAC--ATGTATGTA--ACATTTCCTTTGATTTGATTTGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096886 53 - 14256875 tatatATCACATCGATTTAC--ATGTATATA--ACATTTCCCTTGGTTTAGTTTGCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 992256 53 - 2196201 tatatatcacatcgatttac--atgtatata--ACATTTCCTTTGATTTGATTGTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387076 53 - 5030052 tatatatcACATCGATTTAC--ATGTATATA--ACATTTCCTTTGATTTGATTTGCA i aotNan1.NW_018492112v1 I 1123 C 0 s otoGar3.GL873580 11229737 22 - 11315646 -----------------------------------ATTTTCTCGGATTTTGTGTGCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86592975 29 - 129401213 --------------------------ATATT--ATGGAGCATTTTACATGTTGTGTA i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1441252 41 - 2520184 CATATA------------AA--ATATATGTA--TAATGGTCTTTTACTTGGCATCCA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I e canFam3.chr16 16947865 268 - 59632846 I a score=132119.000000 s hg38.chr4_KI270789v1_alt 109180 9 + 205944 GGCCTCAAT s panTro5.chr4 192896547 9 + 194502333 GGCCTCAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780222 9 + 195804263 GGCCTCAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817501 9 + 4876863 GGCCTCAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706603 9 + 115148730 GGCCTCAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988622 9 + 190429646 GGCCTCAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931393 9 + 189454096 GGCCTCAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323126 9 - 25927173 GGCCTCAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352424 9 + 4669795 GGCCTCAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310505 9 + 135778131 GGCCTCAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763166 9 - 2847728 CGCCTCAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879021 9 + 2368649 GGCCTCAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609005 9 - 190850796 GGCCTCAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096939 9 - 14256875 GGCCTCAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 992309 9 - 2196201 GGCCTCAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387129 9 - 5030052 GGCCTCAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11229759 9 - 11315646 GGCCTAAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86593004 9 - 129401213 GACCCCAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16948133 9 - 59632846 GGCTCCAGT i canFam3.chr16 I 268 C 0 s dasNov3.JH570353 1441293 9 - 2520184 TCCCCCAAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944804 98 + 3993831 I e micMur3.chr14 17505498 158 - 93316391 I a score=362074.000000 s hg38.chr4_KI270789v1_alt 109189 31 + 205944 CTTATTCTCAGAACTGATGTCACAACATCGT s panTro5.chr4 192896556 31 + 194502333 CTTATTCTCAGAACTGATGTCACAACATCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780231 31 + 195804263 CTTATTCTCAGAACCGATGTCACAACATCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817510 31 + 4876863 CTTATTCTCAGAACCGATGTCACAACATCGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706612 31 + 115148730 CTTATTCTCAGAACTGATGTCACAACATCGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988631 31 + 190429646 CTTATTCTCAGAACCGATGTCACAACATGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931402 31 + 189454096 CTTATTCTCAGAACCGATGTCACAACATGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323135 31 - 25927173 CTTATTCTCAGAACCGATGTCACAACATGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352433 31 + 4669795 CTTATTCTCAGAATCGATGTCACAACATGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310514 31 + 135778131 CTTATTCTCAGAACCAATGTCACAACATGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763175 31 - 2847728 CTTATTCTCAGAACCGATGTCACAACATGGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879030 31 + 2368649 CTTATTCTCAGAACCGATGTCACAACATGGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609014 31 - 190850796 CTTATTCTCAGAATCGATGTCACAACGTCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096948 31 - 14256875 CTCATTCTCAGAATCGATGCCACAACATCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 992318 31 - 2196201 CTTATTCTCAGAATTGATGTTGCAGCATCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387138 31 - 5030052 CTTATTCTCAGAATCGATGTAATAACATCTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505656 31 - 93316391 CTTATTCTCAGAATCAATAGCACAACATCTC i micMur3.chr14 I 158 C 0 s otoGar3.GL873580 11229768 17 - 11315646 ---CTTCTCAGAACCAAACG----------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86593013 31 - 129401213 ATTATCCTCAGTATCACTAGTACAATGTCTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16948142 31 - 59632846 CTTGTCCACAGAATCAGTAGTATAGCACCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1441302 28 - 2520184 TTCATCTACAGACTCAGTGT---AACATCTC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3944804 98 + 3993831 I a score=12124758.000000 s hg38.chr4_KI270789v1_alt 109220 750 + 205944 ACAAAGCCCTCATAAG-CATATTTGCCTTCCAAGGTAACTCACAGAATACATCTTCCATTTGTTATTCATATAGTCAGCTCTAGCTGCAATTGCCATTTACCAATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATATAAAAGAAAATAGTTTCTTGGCACAGAAAAGGGATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTATGTCGGTCTCTTCAAGACAATTATTGGCTCTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAGGCTCCCAGGGAAATGGCAGGTTTGGAGGGTGGA--------GAGAATTCAGGTGACAGTGCCAATTCTT-AGTGTCTTCTGTGCTACCATGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGCTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAAGCAATCCACTAT----TTCTCCTTAAGAATGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTGTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTATTCAACT s panTro5.chr4 192896587 750 + 194502333 ACAAAGCCCTCATAAG-CATATTTGCCTTCCAAGGTAACTCACAGAATACATCTTCCATTTGTTATTCATATCGTCAGCTCTAGCTGCAATTGCCATTTACCAATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGGATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTATGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAGGCTCCCAGGGAAATGGCAGGTTTGGAGGGTGGA--------GAGAATTCAGGTGACAGTGCAAATTCTT-AGTGTCTTGTGTGCTACCATGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGCTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACTAT----TTCTCCTTAAGAATGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACGGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACCGTT----TCTATTCAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192780262 750 + 195804263 ACAAAGCCCTCATAAG-CATATTTGCCTTCCAAGGTAACTCACAGAATACATCTTCCATTTGTTATTCATATCGTCAGCTCTAGCTGCAATTGCCATTTACCAATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGGATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTATGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAGGCTCCCAGGGAAATGGCAGGTTTGGAGGGTGGA--------GAGAATTCAGGTGACAGTGCAAATTCTT-AGTGTCTTGTGTGCTACCATGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGCTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACTAT----TTCTCCTTAAGAATGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAATACATTGAACGGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACCGTT----TCTATTCAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3817541 750 + 4876863 ACAAAGCCCTCATGAG-CATATTTGCCTTCCAAGGTAACTCACAGAATACATCTTCCATTTGTTATTCATATAGTCAGCTCTAGCTGCAATTGCCATTTACCAATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGGATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTATGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAGGCTCCCAGGGAAATGGCAGGTTTGGAGGGTAGA--------GAGAATTCAGGTGACAGTGCAAGTTCTT-AGTGTCTTGTGTGCTACCATGATTA------TTTTA----------GAAAATAAAAGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGCTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACTAT----TTCTCCTTAAGAATGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTATTCAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112706643 753 + 115148730 ACAAAGCCCTCATAAC-CATATTTGCCTTCCAAGGTAACTCACAGAATACATCTTCCATTTGTTATTCATATAGTCAGCCCTAGCTGCAATTGCCGTTTACCAATTCCCATCTG-TTAGAGGTTTTGCTTGTACCCGATGGCAGCTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGGATATTTGTTTTAATTGACAAGGTGTAACGTTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATAAATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAGGCTCCCAGGGAAATGGCAGGTTTGGAGGGTGGAGAG-----GAGAATTCAGGTGACAGTGCAAATTCTT-AGTGTCTTGTGTGCTACCATGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGCTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACTAT----TTCTCCTTAAGAATGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCATATTTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTCTT----TCTATTCAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188988662 748 + 190429646 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATGTAATCAGCTCTGGTTGCAATTGCCATTTACCAATTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGTCAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAT-----GAGAATTCAGGGGACAGTGCAAAGTCTC-AGTGTCTTGTGTGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTATTCAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187931433 748 + 189454096 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATGTAATCAGCTCTGGTTGCAATTGCCATTTACCAATTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAGTATTTGTTTTAATTGTCAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAT-----GAGAATTCAGGGGACAGTGCAAAGTCTC-AGTGTCTTGTGTGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTATTCAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323166 748 - 25927173 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATGTAATCAGCTCTGGTTGCAATTGCCATTTACCAATTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTCTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAGGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAT-----GAGAATTCAGGGGACAGTGCAAAGTCTC-AGTGTCTTGTGTGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTATTCAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3352464 748 + 4669795 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATGTAGTCAGCTCTGGTTGCAATTGCCATTTACCAATTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAC-----GAGAATTCAGGGGACAGTGCAAAGTCTC-AGTGTCTTGTATGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAGAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGATGAAGGCACTGTT----TCTGTTCAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134310545 748 + 135778131 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATATAGTCAGCTCTGGTTGCAATTGCCATTTACCAGTTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGAGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTTCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAT-----GAGAATTCAGGGGACAGTGCGAAGTCTC-AGTGTCTTGTGTGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTCTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAC-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTGAGACGAAGGCACTGTT----TCTATTCAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763206 748 - 2847728 ACAAAGCTCTCATAAC-CATATTTGCCTTCCAAGGTAACCCACAGAATACATCTTCCATTTGTTATTCATGTAGTCAGCTCTGGTTGCAATTGCCATTTACCAATTTCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGAGAATGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAC-----GAGAATTCAGGGGACAGTGCAAAGTCTC-AGTGTCTTGTGTGCTACTGTGATTA------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTGTTATAAATGAGTCTAGACTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGGTTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTTTCAGATGAAGGCACTGTT----TCTATTCAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879061 744 + 2368649 ACAAAGCCTTCATAAC-CATATTTGCCTTCCAAGGTAATCCACAGAACACATCTTCCATTTGTTATTCATATAGTCGGCTCTAGTTGCCATTGCCATTTACCAATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACGTAGGTCTGTTCAAGACAATTACTGACTCTTAGGCATACATACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA--ACAACTCTTGGGAAAGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAATGGCAGGTTTGGAGGTTGGAGAC-----GAGAATTCAGGGGACAGTGCAAAGCCTC-AGTGTCTTGTGTGCTACCGTGATTC------TTTTA----------GAAAATAAAGGAGTGCTG--ATTTTTTA-AAACGCAATTTCCTCTGCTCAGCAATG----ATAAATCATTTTGTTATAAATGAGTCTAGAGTCAATGC-TTCAAATGAG---AAAAAAATCAATCCACCAT----TTCTCCTTAAGAACGATTATATATTTGATGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAG-----TATATTGAACAGT--AAAATGTTAAACAGTTTGTGAGATGAAGGCACTGTT----TCTATTCAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609045 760 - 190850796 CCAAAGCCCCCATAAC-CATATTTGCCTTCCGAGGTAATTCACAGAATACACCTTCCATTTGTTTTTCATATAGTCGGCTCTAGTTGCAATTGCCATTTGCTGATTCCCATCTG-TTAGAGGTTTCTCTTGTACCCGATGGCAGGTGAAGCAGATTGTGAATGTAACGGAAAATGTCTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTGATGAGATAAAAATGAATTTTAGACAACTCATTTATTTTTACTTCGGTCTGTTCAGGAAAATTATTGGCTTTTAGGCATAAACACAGAAACCTCAGGAAATTAGGGAAAAAGACAGAAAA--GCAACTCTTGAGAAAGTCAAGTCAAG----CCGATCTTAAAGCTCTCAGGGAAACAGCAGGTTCTGAGGGTGGAGAG----GGAGAATTAGGTCCACAGTGAAAATTATT-AGTGTCTTGTGTGTTACCACCATTATTTA-TTTTTA----------GAAAATAAAGGAGTGTTATTATCTTTTA-AAAAGCAATTTCCTCTGCTCAGCAACGATAAATAAATCATTTTGT--TAAATGAGTCTGGAGTCAATGC-TTCAAATGAG--AAAAAAAATCCATCTACTAT----TTCTCCTTAAGAATGATTATATATTTGGTGAGCATCTTTCTTCTGATAATGA----TTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAACATATTGAACAGT--AAAATGTTAAACAATTTTTGAGGTTAAGGCACTGTT----TCCATTAAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13096979 769 - 14256875 ACAAAGCCCCCATGAC-CATATTTGCCTTCCGAGGTAACT--CAGAGCACCTCTTCCATTTGTTATTCATACAGTCAGCTCTAGCTGCAATTGCCATTTACTGATTCCCATCTG-TTAGAGGTTTCTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTAAGAGATAAAAATGAATTTTAGACATCTCATTTATTTTCACTTCGGTCTGTTCACGACAATTATTGGCTTTTAGGCATATACACAGAAACCTCAGGAAATTAAAG-AAAAGACAGAAAA--ACAACTCTTGAGAAAGTCAATTCAAG----CCGATCTTAACGCTCCCAGGGAAACTGCAGGTTTTGAGGGTGGAGAC----AGAGAATTAAGGCCACAGTGAAAATTCTT-AGTGTTTTGTGTGCTCCCACCAGTATTTA-TTTTTAGAAAATAAAGGAAAATAAAGGAGTGTTATTATTTTTTA-AAAATCAATTTCCTCTGCTCAGCAACAATAAATAAATCATTTTGTTATAAATGAGTCTGGAGTCAATGC-TTCAAATGAG---AAAAAAATCCATCTATGAT----TTCTCCTTAAGAATGATTATATATTTGGTGAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATCTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACAGT--AAAATGTTAAACAATTTTTGAGGTTAAGGCACTGTT----TCTAGTAAACT i saiBol1.JH378165 C 0 M 1627 s cebCap1.NW_016107886v1 992349 753 - 2196201 ACAAAGCCCCCATAAC-GATACTTGCCTTCCGAGGTAGCTCACAGAATACACCTCCCATTTGTTATTCACATAGTCAGCTCCAGTTGCAATGGCCATTTACTGATTCCCATCTG-TTAGAGGTTTCTCTT-TACCCGATGGCAGTTGAAACAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGACATCTCATTTATTTTTACTTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATATACACAGAAACCTCAGGAAATTAGAG-AAAAGACAGAAAA--ACAGCTCTTGAGAAAGTCAATTCAAG----CTGATCTTAACGCTCCCAGGGAAACTGCAGGTTTTGAAGGTGGAGAG----GAAGAATTAGG-CCACAGTGAAAATTCTT-GGTGTCTTGTGTGCTACCACCATTATTTA-TTTTTA----------GAAAATAAAGGAGTGTTATTATTTTTTA-AAAAGCAATTTCCTCTGCTCAACAACGATAAATAAATCATTTTGTTATAAATGAGTCTGGAGTCAATGC-TTCAAATGAGAAAAAAAAAATCCATCTACTAT----TTCTCCTTAAGAATGATTATATACTTGGTGAGTATCTTTCTTCTGATAATGG---TTTCTAAACTCTTATTTCTTGG-CACTCCCATGA-----GTAGTAGAATGTATTGAACAG----------TAAACAATTTTTGTGG-TAAGGCACTGTT----TCTATTAAACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387169 772 - 5030052 ACAAAGCCCCCATAAG-CATATTTGCCTTCCGAGGTAACTCACAGAATACATTGTCCGTTCGTTATTCATATAGTCAGCTCTAGTTGTAATTGCCATTTACTGATTCCCATCTG-TTAGAGGTTTCTCTTGTACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACATAAAATGTTTTCTTGGCACAGAAAAGGAATATTTGTTTTAATTGACAAGGTGTAACATTTATGAGACAAAAATGAATTTTAGACTTCTCATTTATTTTTACTTCGGTCTGTTCAAGACAATTATTGGCTTTTAGGCATATACACAGAAACCTCAGGAAATTAGGG-AAAAGACAGAAAA---CAACTCTTGAGAAAGTCAATTCAAG----CTGATCTTAAAGCTCCCAGGGAAACAGCAGGTTTTGAGGGTGGAGAG----GGAGAATTAAGGCCACAGTGAAAATTCTTAAGTGTCTTGTGTGCTACCACCATTATTTA-TTTTTAGAAAATAAAGGAAAATAAAGGAGTGTTATTATTTTTTA-AAAAGCAATTTCCTCTGCTCAGCAACGATAAATAAATCATTTTGTTATAAATGAGTCTGGAGTCAATGC-TTCAAATGAG--AAAAAAAACCCATCTACTAT----TTCTCCTTAAGAATGATTATATATTTGGTTAGTATCTTTCTTCTGATAATGA---TTTCTAAAATCTTATTTCTTGG-TACTCCCATGA-----GTAGTAGAATATATTGAACAGT--AAGATGTTAAACAATTTTTGAGGTTAAGGCACTGTT----TCTATTAAACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17505687 759 - 93316391 ACAAAGCCCTCGTAAC-TATATTTGCCTGCCAAGGTAACTCACAGAACACATCTTCCATTTGTTATTCATATAGTCAGTTCTGGTTGCAATTGCCATTTACTGATTCCCATCTG-TTAGAGGTTTTTCTTATACCCGATGGCAGTTGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCACGGAAAAGGAGTATTTGTTTTAATTGACAAGGTATAACATTTATGAGATAAAAATGAATTTTAGCCATCTCATTTATTTT-ACTTCAGTCAATTCAAGACAATTATTGGCATTTAGGTGTATATACAGAAACCTCAGGAAATTATGG-GAAAGGCAGAAAA--ACAACTCTCAGGGAAGTCAATTCAAGCATTCTAATTTTGAAACTTTCAGGGAAATAG---ATTTGGAGGATGGAGGA----GGAGAATTAAGGTGGCAGTGGAAATTCTT-AGTATCTTTTGTGCCACTGCAATTATTTA-TTTTTA----------GAAAATAAAGAAGCATTATGATCTTTTA-AA--GCAATTTCTTCTGCTCAGCAATGATAAGTAAATCATTTTATTAC-AAAGAGTCTGAAGTCAATGCTTTCAAATTAG-AAAAAAAAATCAATCTGATAT----TTCTCCTT---AATAATCATATATTTGATGAGTATCTTTCTTCTGATAATGA--TTTTTTAAAATCTTATTTCTTGC-CACCCTCTTGA-----GTAGCAGAATATATGGAACAGT--AAAATGCTAAACAATATTTGAGAGTAAGGCACTGTT----TCTATTTATCT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3944902 763 + 3993831 ACAAAGCCCTCGTAAC-TACATTCGCCTGCCAAGGTAACTCACAGAACACATCTTCCATTCGTTATTCATATAGTCAGTTCTAGCTGCAATTGCCATTTACTGATTCCCATCTG-TTAGAGGTTTTTCTTATACCTGATGGCAGTCGAAGCAGATTGTGAATGTAACAGAAAATGTGTTCCTGGCACGGAAAAGGAGTATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATTTTAGCCATCTCATTTATTTT-ACTTCAGTCAATTCAAGACAATTATTGGCATTTAGGTGTATATACAGAAACCTCAGGAAATTACGG-GAAAGGCAGAAAA--ACAACTCTCAGGAAAGTCAATTCAAGCGTTCTAATTTTAAAACTTTCAGAGAAATAG---ATTTGGAGGATGGAGAG----GGAGAATTAAGGTGGCAGTGGAAATTCTT-AGTATCTTACGTGCCACTGCAATTATTTA-TTTTTA----------GAAAATACAGAGGTATTATGATCTTTGA-AA--GCAATTTCCTCTGCTCAGCAATGATAAATAAATCATTTTATTAC-AAAGAGTCTGAAGTCAATGCTTTCAAATGAG-AAAAAAAAATCAATCTGATAT----TTCTCCTTAAGAATGATCATGTATTTGATGAGTATCGTTCTTCTGATAATGA--TTTTTTAAAATCTTATTTCTTAAGCATCCTCGTGA-----GTAGTAGAATATATTGAACAGT--AAAATGCTAAACAATATTTGAGAGTAAGGCACTGTT----TCCATTTATCT i proCoq1.NW_012145301v1 I 98 C 0 s otoGar3.GL873580 11229785 760 - 11315646 AGAAAGCCTGCGTGAC-TGTGTTTGCC-ACCATGGTAGCT--TAGAACTCATCTCCCGTTTGTTATTCATACAGTCGTTTCTAGTGGCAATTGCCATTTACTGATTCCCATCTG-CTTGAAGTTTTTCTTGTATCCGACGGCAGT-GAAGCAGATTGTGAATGTAACAGAAAATGTTTCCTTGGCACAGAAAAGGGGTATTTGTTTTAATTGACAAGGTGTAACATTTATGAGATAAAAATGAATCCCAGCCATCTCATTTATTTT-GCTTCAGTCAATTCAAGACAATTATTGGCATTTAGGTGTATATACAGAAACCTCAGGAAATTATGG-GCCAGGCAGAAAA--ACAA--GTCAAGAAAGTCAATTCAAGCTTTCTAATTTTAAAATTTTCAGGGAAATAGCATATTTGGAGGATGGA-------GGAGACCGAAAGTGGCC-TGGAAATTTTT-AGTATCTTATGTGCCACTGCAATTATTTA-TTTTTA----------GAAAATAAAGAGGCATTATGATTTTTTA-AA--GCAGTCTCCTCTGCTCAGCAATGATAAATCAATCATTTCATTACAAAAGAGTCTAAAGTTAATGCTTTCAAATGAGAAAAAAAAAATCAATCCACTAT----TTCTCCTCAAGAATGATCATCCATCTGATGAGTATCTTTCTTCTGATAATGA--TTTTTTAAAGTGTTATTTCTTGG-TGCCCTCATGA-----GTAGTGCAATATATTGAAAAGT---AAATGCTAAACAATATTTGAGAGTAAGACACTCTCATTATTTATTTATCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86593044 755 - 129401213 ATAAAGTTCCCCTAACATACAAAAGCCTGCCAGGGTGACTCACAGGACCTGTCCCCCATTTGTAACGCATTCCCTCACATATAGATGGAGATGCCTTTTACTGATTCCCATCTG-TTGGAGGTTTTGCTAGTACCTGACAGCAACAGAAGCAGATTGTGAATGTAACAGAAAATGTTTTCTTGGCATAGAAAATGAATATTTGTTTTAATTGACAAGGTATAACATTTATGAGTCAAAAATGAATTTTAGCCTTGCCATTCATTTT-ACTTCTGTCTATTGAGAGCACTTGGTGGCAGTTAGGTGTACATTGTATGAACCCAGAAAATTGATA-GAAAGAAAGAAAAGAACAATTTTCAGGAGTGCCAACTCAAGTATTCTGATTTTAAAGTGTTTAGAGCAATAAAAGATTTGGTGGATGGAGAG----GGAAAATTGAGGTGGCAATAGGATTTCTT-CACATCTTGTGTGTTGCCATAATTATTTA-TCTGTA----------GAAAATAAAAGAGTGTTATTATTTTTTA-AAAAGCAATTTCCCCTGTTTGGCAATGAAAAATAAATCATTGTAAAATAAATGTATCTGAAGCTGATGCTTTCAAATGAG--AAAAAAAATCAATCTACAATAGTGCTGCTATTCAGACTGACCACATATTTGATGAATATCTGTTATTTGGTAATGA---TTTCTAAAATCTTATTTCTTAG-----------------------AAATATATTTTGCAGT--AAAATGCTGAGCAAT-TTTGAGACAGTGACAATATT----TCTAATAAGCG i mm10.chr8 C 0 C 0 s canFam3.chr16 16948173 770 - 59632846 AAAAAATCCTCAGAAT-CGTGTCTGACTGCCAAGGTAACTCACAAAATATGTCTCCCATTTGTTATTCAGATAGTCAGTTCTACTTGCAATTGCTATTTACTGATTCCCATCTG-TTAGAGGTTTTTCTTGTACCCAATGGCAGTTGAAGCAGATTGGGAATGTAACAGAAAATGTTTTCTTGGCACAGAAAAGGAGTATTTGTTTTAATTGACAAGGTGTAACATTTACAAGATAAAAATGAATTTTAGCCATCTCATTTATTTT-ATTTCAGTCTATTCAAGACAATTATTGGCATTTACGTAGATATAGAGTAACCTTAGGAAATTTTGGAAAAAGACAGAAAA--AGAACTCTCAGGAAACTCATTTCAAGCTTTCTGATTTAAAAACTTTCAGGGAAATAGCAGATTTGGAGAATGGGGAG----GGAGAATTAGGGTGGCAGCA-GAATTCTT-AGTGTTTTATGTGCTACTATAATTATCTATTTTTTA----------GAAAATAAAGGAGCATTA--TTATTTTAGAAAAGCAATTTCCCCTGTTCAGCAATGATAAATAAATCATTTTATTACAAATGAGCCTGAAGTCAATGCTTTCAAATGAG-AAAAAAAAATCAATCCCCTGT----TTCTCCTTAAGAATGATCATATAGTTGATGAGTATCTTTCATCTGATAATGA--TTTTTTTTAATCCTATTTCTTGA-TACTCTCATGA-----GGAGTAGAATATATTGAACAGAAAAAAATGCTAAATAATTTTTTGAGGTTAGGCACTTAT----CCCAGTTAAGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1441330 771 - 2520184 AAAAAACTCTCACAGC-CGTGTTTGCCTGCCAAGGTAACTCACGGAATATGCCTTCCATTTGTTATTCAGATAGTCAGTTCTGAATGCAATTGCCATTTACTGATTCCCATCTGTTTAGAAGTTTTTCTTGTACCCAACGGCAGTTGAAGCAGATTGTGAACGTAACAGAAAATGTTTTCTTGGCACAGAAAAAGAGTGTTTGTGTTAATTGACGAGGTGTAACATTTACGAGATAAAAATGAATTTTAGCAATCTCATTTATTTT-ACTTCAGTCTATTCAAGACACTTATTGGCATTTAGGTGTATATACAGTAACCTCAGGAAATTATGG-GAAAGACAAAAAA--ACAAATC--AAGGTAGCCAATTCAAGCATGCTGGCTTTAAACCTTTCAGAGAAATAGTAGGTTTGGAAGATGCAGGGGGCAGGGGAGTTTAGATGGTAGTGGAATTTCTT-ACTGTATCATATGCAAACAAAATTATTCA-GTTTTT----------GCAACTGAAGAAAACTTA--TTTTTTTA-AGAAAACAATTCCTCTTGACGGTAATGATAAATAAATCATTTTCTTACAAATGAGCCTGAGGTCAATGATTTCAAATGAG---AAAAAAATCAATCCACT-T----TCCTCCTCGAGAATGATCAGACATTTGGTTAGTATTATTTATCTGATAATGATTTTTTTTCCAATATTATTTCTTGG-TAGCCTCATGATAGAGGTGATAGAGTACAATGAACAGT--ACAATGTTATAAGGTCTTTGAGAATAGAGC--TGTT----TCTATTAAAGT i dasNov3.JH570353 C 0 C 0 a score=88907.000000 s hg38.chr4_KI270789v1_alt 109970 9 + 205944 TATCA----CAAT s panTro5.chr4 192897337 9 + 194502333 TACCA----CAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781012 9 + 195804263 TACCA----CAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818291 9 + 4876863 TATCA----CAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707396 9 + 115148730 TATCA----CAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989410 9 + 190429646 TATCA----CAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932181 9 + 189454096 TATCA----CAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323914 9 - 25927173 TATCA----CAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353212 9 + 4669795 TAGCA----CAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311293 9 + 135778131 TATCA----CAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763954 9 - 2847728 TATCA----CAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879805 9 + 2368649 GACGA----CAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609805 9 - 190850796 CATCG----CAAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993102 9 - 2196201 CATCA----CAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387941 9 - 5030052 CATCA----CGAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17506446 9 - 93316391 TATCA----CAAT i micMur3.chr14 C 0 I 130 s proCoq1.NW_012145301v1 3945665 9 + 3993831 TATCA----CAAT i proCoq1.NW_012145301v1 C 0 I 69 s otoGar3.GL873580 11230545 13 - 11315646 CATTAAATGTAAT i otoGar3.GL873580 C 0 I 13 s mm10.chr8 86593799 9 - 129401213 TATCA----CAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16948943 2 - 59632846 ----------GA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442101 9 - 2520184 TATCA----CAGT i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13097748 1627 - 14256875 M a score=578157.000000 s hg38.chr4_KI270789v1_alt 109979 69 + 205944 T-------------ACTGAGGGTATCAGGTATGTACTGGATTGTCATAGCTTAAAGAGATACCAGGACGATG----------------------------------------------------ACAAAGGAAA s panTro5.chr4 192897346 69 + 194502333 T-------------ACTGAGGCTATCAGGTATGTACTGGATTGTCATAGCTTAAAGAGATACCAGGACGATG----------------------------------------------------ACAAAGGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781021 69 + 195804263 T-------------ACTGAGGCTATCAGGTATGTACTGGATTGTCATAGCTTAAAGAGATACCAGGACGATG----------------------------------------------------ACAAAGGAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818300 69 + 4876863 T-------------ACTGAGGGTATCAGGTATGTACTGGATTGTCATAGCTTAAAGAGATACCAGGACGGTG----------------------------------------------------ACAAAGGAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707405 69 + 115148730 T-------------ACTGAGGTTATCAGGTATGTACTGGATTGTCGTAGCTTAAAGAGATACCAGGACGATG----------------------------------------------------ACAAAGTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989419 74 + 190429646 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAA----ACACTAGGACGATG----------------------------------------------------ACAAAGTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932190 78 + 189454096 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAAAGAAACACTAGGACGATG----------------------------------------------------ACAAAGTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24323923 78 - 25927173 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAAAGAGACACTAGGACGATG----------------------------------------------------ACAAAGTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353221 77 + 4669795 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAA-GAGACACTAGGACGATG----------------------------------------------------ACAAAGTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311302 78 + 135778131 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAAAGAGACACTAGGACAATG----------------------------------------------------ACAAAGTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2763963 78 - 2847728 TAC----TGAGTAAACTGAGGGTATCAGGGACGTACTGGATTGTAGTAGCTTAAAGAGACACTAGGACAATG----------------------------------------------------ACAAAGTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879814 78 + 2368649 TAC----TGAGTAAACTGAGGGTATCGGGGACGTACTGGATTGTAGTAGCTTAAAGAAACACTAGGATGGTG----------------------------------------------------ACAAAGTAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609814 73 - 190850796 GAC----TGTGTAAACTGAGGGGTTCAGATACATACTGGATGACAGCAGCTTACAGAGGTACTAGGGTGATA----------------------------------------------------ACA-----AA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993111 76 - 2196201 TAC----TGTGTAAACCGAGGGG-TCAGACACGTACTGGATT-TAGTAGCTTGAAGAGAGACTAGGACGATA----------------------------------------------------AGAAGGTCAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3387950 78 - 5030052 TAC----CGTGTAAACTGAGGGCATCAGATACGTACTGGATTATAGTAGCTTAAAGAGATACTAGGACGATA----------------------------------------------------ACAAAGTAAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11230571 73 - 11315646 TAA----TGAATAAACAGAGGGTATCAGATGCAAACTAGATG-----AGCGTAAAGCGATATCCAGGTGAAG----------------------------------------------------ATAAAGAAAG i otoGar3.GL873580 I 13 I 4 s mm10.chr8 86593808 84 - 129401213 TAATGTGTGAGTAAGTTGAGAATATCAGGTAGGCACTAAACTAGAGTGGTTTAAAGAGGTACTAGGAAGATGC-------------------------------------------------AAATAAATGAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16948945 120 - 59632846 --------------ACTGAGGGTACCGGATTCATACCAGATTAGACTAGTTTAAAGGGATATTAGGAAGATGTTCCCCCCTCCCAAAGTAGTAAAACAAAAAGTCAAGTTGAAAAGTAGTAAAAAGAAAGTAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442110 76 - 2520184 ----TAATGAGGGAACTGAGGGTGCCGATTACTTACCGGATCGTACTAGCTTAAGGGAATATTAGGATGATG----------------------------------------------------CCAAAGAA-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3945674 69 + 3993831 I e micMur3.chr14 17506455 130 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=471206.000000 s hg38.chr4_KI270789v1_alt 110048 46 + 205944 GTTGAAGTTAGCTATTCTGATC--AGTAGAAGGA---CACGCTTTT-CCCCG s panTro5.chr4 192897415 46 + 194502333 GTTGAAGTTAGCTATTCTGATC--AGTAGAAAGA---CACGCTTTT-CCCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781090 46 + 195804263 GTTGAAGTTAGCTATTCTGATC--AGTAGAAGGA---CACGCTTTT-CCCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818369 47 + 4876863 GTTGAAGTTAGCTATTCTGATC--AGTAGAAGGA---CACGCTTTTCCCCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707474 45 + 115148730 GTTGAAATTAGCTATTCTGATC--ACTAGAAAGA---CATGCTTTT--CCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989493 46 + 190429646 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAACTATT-TCCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932268 46 + 189454096 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAACTATT-TCCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324001 46 - 25927173 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAACTATT-TCCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353298 46 + 4669795 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAACTATT-TCCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311380 46 + 135778131 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAAATACT-TCCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764041 46 - 2847728 GTTGAAATTAGCTATTCTGATC--AGTAAAAAGA---TAAACTATT-TCCCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879892 46 + 2368649 GCTGAAATCAGCTATTCTGATC--AGTAGAAAGA---TAAACCATT-TCCCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609887 45 - 190850796 GTTGAAAGTAGTGATTCTGATC--AGCAGAAAGA---CACGCTACT--TCCC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993187 45 - 2196201 GTTGAAATTTGTTATTCTGATC--AGTAGAAAGA---CATGCTATT--TCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388028 45 - 5030052 GTTGAAATTAGTTATTCTGATC--AGTAAAAAGA---CACGTTATT--TCCC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3945743 45 + 3993831 GTTGAAATTCGCTATTCTGATC--AGTAGAAAGA---CACTCTATG-ACCC- i proCoq1.NW_012145301v1 I 69 C 0 s otoGar3.GL873580 11230648 45 - 11315646 GTTGATATTTGGCATTCTGATT--AATAAAAACA---CACTATATG-TCCG- i otoGar3.GL873580 I 4 C 0 s mm10.chr8 86593892 49 - 129401213 GTTGAAATTAGTTATTTTTATCTAAGTGGAAAGAAACTATGCCTTT-ACC-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16949065 46 - 59632846 GTTGAAATTAACCATTCTTATC--AGTGGAAAGG---CACTATATT-TCCCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442186 45 - 2520184 ATTGAGATTAGCTATTCTGATT--AGTGGGAGCA---TACTATATT-TCCC- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17506455 130 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=1412050.000000 s hg38.chr4_KI270789v1_alt 110094 120 + 205944 CAAAGGAAATAAAAGTGTTAGTGTCGTTCTGTTGAG-ATAATTTTATCAAATAG-AAAAAAGGAATA-AAAGGAAAGTCATCTGTG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC s panTro5.chr4 192897461 120 + 194502333 CAAAGGAAATAAAAGTGTTAGTGTTGTTCTGTTGAG-ATAATTTTATCAAATAG-AAAAAAGGAATA-AAAGGAAAGTCATCTGTG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781136 120 + 195804263 CAAAGGAAATAAAAGTGTTAGTGTCGTTCTGTTGAG-ATAATTTTATCAAATAG-AAAAAAGGAATA-AAAGGAAAGTCATCTGTG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818416 120 + 4876863 CAAAGGAAATAAAAGTGTTAGTGTCGTTCTGTTGAG-ATAATTTTATCAAATAG-AAAAAAGGAATA-AAAGGAAAGTCATCTGTG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707519 121 + 115148730 CAAAGGAAATAAAAGTGTTAGTGTCATTCTCTTGAG-ATAATTTTATCAAATAGAAAAAAAGGAATA-AAAGGAAAGTCATCTGTG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989539 115 + 190429646 CAAAGGAAATAAAAGTGTTAGTGACGTTCTCTTGAG-ATAATTTTATCAAATAG-AAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932314 115 + 189454096 CAAAGGAAATAAAAGTGTTAGTGACGTTCTCTTGAG-ATAATTTTATCAAATAG-AAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324047 115 - 25927173 CAAAGGAAATAAAAGTGTTAGTGACGTTCTCTTGAG-ATAATTTTATCAAATAG-AAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353344 115 + 4669795 CAAAGGAAATGAAAGTGTTAGTGACATTCTCTTGAG-ATAATTTTATCAAATAG-AAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311426 115 + 135778131 CAAAGGAAATAAAAGTGTTAGTGACATTCTCTTGAG-ATAATTTTATCAAATAG-AAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764087 115 - 2847728 CAAAGGAAATAAAAGTGTTAGTGACGTTCTCTTGAG-ATAATTTTATCAAATAG-GAAAAAAGAATA-AAAGGA-----ATCTATG-CATTTGTAACCCAGCGATTCTCATTAAATCATTATAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 879938 114 + 2368649 CAAAGGAAATGAAAGTGTTAGTGAGGTTCTCTTGAG-ATAATTTTATCAAACAG-AAAAAAAGAAT--AAAGGA-----ATCTATG-CGTTTGTAACCCAGCGATTCTCATTAAATCATTATAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189609932 118 - 190850796 CAAAGGAACT-AGAGTATTAGTGACATTCTCATGAG-ATAATTTTATCAAAGAG-AAAAAA-GAATA-AAAAGAAAGTAATCTATG-CCTTTGAAACCCAGCGATTCTCATTAAATCATGACAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993232 118 - 2196201 CAAAGGAACT-AAAGTATTAGTGACATTCTCGTGAG-ATAATTTTATCAAAGAG-AAAAAA-GAATA-AAAAGAAAGTAATCTATG-CATTTGAAACCCAGAGATTCGCATTAAATCATCACAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388073 118 - 5030052 CAAAGGAACT-AAAGTATTAGTGACATTCTCATGAG-ATAATTTTATCAAAGAG-AAAAAA-GAATA-AAAAGAAAGTAATCTATG-CATTTGAAACCCAGCGATTCTCATTAAATCATTACAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17506585 121 - 93316391 CAAAGGAAATAAAAGTGTTAGTGGCATTCTTATCAG-ATCATTTTATCAGAGAG-AAAAAGGGAATA-AGAGGGAAATCTTCCATTCCATTTATAACCCAGCGAGTCTCATTACATCATTATAC i micMur3.chr14 I 130 I 267 s proCoq1.NW_012145301v1 3945788 121 + 3993831 CAAAGGAAATAAAAATGTTAGTGACATTGTCATCAG-ATCATTTTATCAGAGAG-AAAAAGGGAATA-AAAGGAAAATATTCCATTCCATTTATAACCCAGCGAGTCTCATTACATCATCATAC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11230693 112 - 11315646 CAAGGGAAATATAAGTGTTAGTGACATTCTTATCAG-ACCATTTTATCAGACAC-AAA--------A-AAAGGAAAATATTCCATTTCATTTGTAA-TCAATGAATGTCATTACATCATTATAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86593941 91 - 129401213 --AAGGATGT--AAGGCTTAGCAAAATTCTCATAAGTGTATGTTTATCAGAGAG-AAA-------TA-AAGGGAAAATAGTC-----CATTTG-------GCTAGCCTGATTGAAT-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16949111 121 - 59632846 CAAAGGAAAT-AAAGTAATAGCAACGTTCTCATGAG-ATCATTTTATTAGATGA-AAAAAGGGAATACAAAGGAACATGTTCTATCCCATTTGTAACCCAGTGAGCCTCATTAAATCATTATAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442231 100 - 2520184 CAAAGGAAATAAAAGCTATAGGAACATTTTCACAAG-ATCATTTTACCAGGGAG-AAAAAGGGAGTA-AAAGTACGGTATTCTATCCCATTTGTAA---------------------ATCATGT i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13097748 1627 - 14256875 M a score=22815.000000 s hg38.chr4_KI270789v1_alt 110214 2 + 205944 CA s panTro5.chr4 192897581 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781256 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818536 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707640 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989654 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932429 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324162 2 - 25927173 CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353459 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311541 2 + 135778131 CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764202 2 - 2847728 CA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880052 2 + 2368649 CA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610050 2 - 190850796 CA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993350 2 - 2196201 CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388191 2 - 5030052 CA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3945909 2 + 3993831 CA i proCoq1.NW_012145301v1 C 0 I 266 s otoGar3.GL873580 11230805 2 - 11315646 CG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16949232 2 - 59632846 GA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442331 2 - 2520184 GA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17506706 267 - 93316391 I e mm10.chr8 86594032 0 - 129401213 C e saiBol1.JH378165 13097748 1627 - 14256875 M a score=2716747.000000 s hg38.chr4_KI270789v1_alt 110216 303 + 205944 TGCTAACAAGA-GAAA-AAAGCGTCTACAGGTGGTACTCCA-TTTTC--AACT-GGGAAAAGAGCAGGTCTAATTTG-AAATAACCCAAGGCTAAG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATCAACACTA---------------TGGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGAACCT---------A------------------------------------TGATATGTTCTATCTTCTTGTAACAGTGCTACCC------------------------------------TC-TGGGAGACTA-CTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTAGTTTAGGACTCAGGGTGAAAAGGAGGAGCAGTAGGAAGTGAGGCTA s panTro5.chr4 192897583 303 + 194502333 TGCTAACAAGA-GAAA-AAAGCGTCTACAGGTGGTACTCCA-TTTTC--AATT-GGGAAAAGAGCAGGTCTAATTTG-AAATAACCCAAGGCTAAG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATCAACACTA---------------TGGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACCT---------A------------------------------------TGATATGTTCTATCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGGAGACTA-CTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTAGTTTAGGACTCGGGGTGACAAGGAGGAGCAGTAGGAAGTGAGGCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781258 303 + 195804263 TGCTAACAAGA-GAAA-AAAGCGTCTACAGGTGGTACTCCA-TTTTC--AATT-GGGAAAAGAGCAGGTCTAATTTG-AAATAACCCAAGGCTAAG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATCAACACTA---------------TGGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACCT---------A------------------------------------TGATATGTTCTATCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGGAGACTA-CTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTAGTTTAGGACTCGGGGTGAAAAGGAGGAGCAGTAGGAAGTGAGGCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818538 303 + 4876863 TGCTAACAAGA-GAAA-AAAGCGTCTACAGGTGGTACTCCA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAACCCCAGGCTAAG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AGTCAACACTA---------------AGGGCACACATCAGGTGTC-C-CCGAGGACCACACTATGAGGAAGCGCCT---------A------------------------------------TGATATGTTCTATCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGGAGACTA-CTTGCC---------------------CAGGGCTGGGAATTTATCTCTGGAGTTAGTTTAGGACTCAGGGTGAAAAGGAGGAGCAGTAGGAAGTGAGGCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707642 303 + 115148730 TGCTAACAAGA-GAAA-AAAGCGTCTACAGGTGGTACTCTA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAACCCAAGGCTAAG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATCAACACTA---------------AGGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACCT---------G------------------------------------TGATATGTTCTGTCTTCTTGTAAGGGTGCTACCC------------------------------------AT-TGGGAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTAGTTTAGGACTCAGGGTGAAAAGGAGGAGCAGTAGGAAGTGAGGCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989656 303 + 190429646 TGCTAACAAGA-CAAA-AAAGTGTCAATAGATGGTACTCCA-TTTTC--AACT-GGGAAAATAGCAGGTCTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------TGATATGTTCTAGCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAGGAGGAGCAGTAGCAAGTGAGGCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932431 303 + 189454096 TGCTAACAAGA-CAAA-AAAGTGTCTATAGATGGTACTCCA-TTTTC--AACT-GGGAAAATAGCAGGTCTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------CGATATGTTCTAGCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CGGGGCTGGGAATTCATCTTTGGAGTTGGTGTAGGAGTCAGGGTGACAAGGAGGAGCAGTAGCAAGTGAGGCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324164 303 - 25927173 TGCTAACAAGA-CAAA-AAAGTGTCTATAGATGGTACTCCA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------CGATATGTTCTAGCTTCTTGTAACGGTGCCACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAGGAGGAGCAGTAGCAAGTGAGGCTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353461 303 + 4669795 TGCTAACAAGA-CAAA-AAAGTGTCTATAGATGGTACTCCA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------TGATATGTTCTAGCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAGGAGGAGCAGTAGCAAGTGAGGCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311543 303 + 135778131 TGCTAACAAGA-CAAA-AAAGTGTCTATAGATGGTACTCCA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------TGATATGTTCTAGCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAGGAGGAGCAGTAGCAAGTGAGGCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764204 303 - 2847728 TGCTAACAAGA-CAAA-AAAGTGTCTATAGATGGTACTCCA-GTTTC--AATT-GGGAAAATAGCAGGTGTAATTTG-AAATAATCCAAGGCTATG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACTA---------------AAGGCACACATCAGGTGTC-C-CCGAGGGCCACGCTATGAGGAAGCACTT---------A------------------------------------TGATATGTTCTAGCTTCTTGTAACGGTGCTACCC------------------------------------TC-TGGAAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAGGAGGAGCAGTAGCAAGTGAGGCTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880054 303 + 2368649 TGCTAACAAGA-CAAA-AAAGTGTCTATAGACGGTACTCCA-TTTTC--AATT-GGGAAAATAGCAGGTCTAATTTG-AAATAACCCAAGGCCGTG------GGTGCTATAGGATGGAAGGGGA-----ATTTTT--AATTGACACGA---------------AAGGCACACATCAGGTGTC-C-CTGAGGGCCACGCTATGAGGAAGCACCT---------A------------------------------------TGATATGTTCTAGCTTCTTGTAAGGGTGCTGCCC------------------------------------TC-TGGGAGACTG-TTTGCC---------------------CAGGGCTGGGAATTTGTCTTTGGAGTTGGTTGCGGAGTCAGGGTGAAAAGGAGGAGCAGTAGGAAGTGCGGCTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610052 300 - 190850796 TGCTAAAAACA-GAAA-AAAGGGTCTATAGACTGCATTCCA-TTTTC--AACT-GGGAAAGTGTCAGGTATAATTGGAAAATAACCCCAGGCTAAG------GGTGCTGTAGGATGGAAGGGGA-----ATTTTT--AATCGACACCA---------------AGGGCACACATCAGGTGTC-C-CAGAGGGCCACGCCGTGAGGAAGCCCCT------------------------------------------------ACATGTTCTCTCTTCCTGTAGCGG-AAGAGAG------------------------------------TC-TGGGAGACTA-TTTGCC---------------------CAGAGCTGTTAATTTACCTTCGGAGTTGGTTTAGGAGTCAGGGTGAAAAAGAGGAGCAGGACGAAGTGAAGCTA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993352 300 - 2196201 TGCTAAAAACAGGAAA-AAAGCGTCTAGAGACTGCATTCCA-TTTTC--AATT-GGGAAAATATCAGGTATAATTGGCAAATAACCCAAGGCTAAG------GGTGCTCTAGGATGGAAGGGGA-----ATTTTT--AATCGACACCA---------------AGGGCACACACCAGGTGTC-C-CAGA-GGCCACGCTATGCAGAAGCGCCT------------------------------------------------ATATGTTCTCCCTTCCTGTAGCGG-AAGAGCG------------------------------------TC-TGGGAGACTG-TTTGCC---------------------CAGAGCTGTTAATTTATCTTTGGAGTTGGTTTAGGAGTCAGGGTGAAAAAGAGGAGCAGGAGGAAGTGAAGCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388193 301 - 5030052 TGCTAAAAACAGAAAA-AAAGCGTCTATAGACTGCATTCCA-TTTTC--AATT-GGGAAAATATCAGGTATAACTGGAAAATAACCCAAGGCTAAG------GGTGCTCTAGGATGGAAGGGGA-----ATTTTT--AATCTACACCA---------------AGGGTGCACATCAGGTGTC-C-CAGAGGGCCACGCTATGAGGAAACGCCT------------------------------------------------ACATGTTCTCTCTTCCTTTAGCGG-AAGACAG------------------------------------TC-TGGGAGGCTG-TTTGCC---------------------CGGAGCTGTTAATTTATCTTTGGAGTTGGTTTAGGAGTCGGGGTGAAAAAGAGGAGCAGGAGGAAGTGAAGCTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11230807 256 - 11315646 TTATAAAAAGA-GAAAGAAAGTGTGTATAGACTGCCTCTGATTTTTC--AATT-GGAAAAATACCAGGTAGAATTTG-AAATAGCCCAAGGCTAAA------GGGCCCATGACATAGGAGGGAC-----A--------------------------------------------------AC-C-CTGGGGGAAGCACCATGAGAAAGTCCCTCCTTGAGTTC------------------------------------TGTTGTATTCTATCATCCT--------------C------------------------------------TT-TGAGAGAGAATTTTGAG---------------------CAGAGGTATTTCTGCATCTTTGCATTTGGGTTAGGAG------------AGAGGAAGAAGAGGAAGTCGGCCTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86594032 292 - 129401213 ---------------------CTCCTATTACTGAAATTAAT-TTTTC--ATTT-GAAAAAATTACCATAATAATTTT-ATATATCCTAGGACAAAG------------TTAAGATTGTAAATCACCTATATTTGT--CACTGATACTAGCAATTTTAAACCCCAAGAAACACAGAAAAT----C-TTAATAATCATTCTATACAAAAACATTG---------A------------------------------------CTTTATATCCCATTTTCTAAGGTCCATGTTTTTT------------------------------------ACTTAAGGGATAA-ATTGCC---------------------CTGATCTCTTTCCCTATCTTTTTAATTGGTTTAGGGGTACTTGTGAAAAC----AGGAGTAAGAAGTGGAACTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16949234 395 - 59632846 TGCTAAAATGA--GAA-AGAGTATCTATA-ATGCATCCCAA-TTTTC--AATTCTGGAAAATATTTGGTACAATTTG-AAAGAACCCAAGGCTAAGGTCTAAGGTATTATGGTACAGGAAGGAT-----GATTTT--GATTGATACTAGTAGTTTTAAGCCCCAAGGGACGAATCAAATGTC-CTTTGAAAGTTGCAGTATAAGAAAACACCT---------AatatatatatatatatatatatatatatatatatatatatatatTCGACCCTCTTGTAGCAGTGTTATCCAATCATTTCCCTGCCTCCTTGAAACCTTTGTCTTCATT-TGAGAGACCA-TTTGCC---------------------CAGAGCTCTTAACTTATTTTTCTAATTGGTTTAGAAATGAGAGTGATAA-GAGGAGCATGAGGAAATGGGGCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442333 357 - 2520184 TGCTAAAAAGA-GAAG-AAAGTGTCTACAGAAGACAGCCCA-TTTTCCAATTT-GAGAAAATATCAGGCATAATTTG-AACTATTCCTTGGCTAAA------AGTACTGTGACATAGGAAGGCC-----ATTTTTTGAATGGAAACCAGTAGTTTTAAGCCCCAGGGGACATACCAAGTGTTGT-CTGAAGGTCACACTGTAAGAAACCAGGT---------C------------------------------------CCCTGTGGCCTGGCTGCCTGAAGCCGTGCTGTCCAGCCCTTTCTCCGCC---------------------TC-CTGGAAACC--TTTGCCTTCACGTGAGGGACCGCACTTCCGAGCTGCTTTCATACCTTTTTAATTGGTTTAGGAGTCAAGATGAAAA-GAGCAGTGAGAGCGTGTGCGACTA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3945911 266 + 3993831 I e micMur3.chr14 17506706 267 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=1420916.000000 s hg38.chr4_KI270789v1_alt 110519 119 + 205944 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATTCCATATTCTGACTAAGCAGAG-AAATGAACCTGTAGTTTCA----TCC---ATATTTTCAAAAGCAAAACTTCTTCTACTAAAATAA s panTro5.chr4 192897886 116 + 194502333 TTGGAAAGCT---GTAA-AAAGTGGCCCCTTCATTATTATTCCATATTCTGACTAAGCAGAG-AAATGAACCTGTAGTTTCA----TCC---ATATTTTCAAAAGCAAAACTTCTTCTACTAAAATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781561 116 + 195804263 TTGGAAAGCT---GTAA-AAAGTGGCCCCTTCATTATTATTCCATATTCTGACTAAGCAGAG-AAATGAACCTGTAGTTTCA----TCC---ATATTTTCAAAAGCAAAACTTCTTCTACTAAAATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818841 119 + 4876863 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATTCCATATTCTGACTAAGCAGAG-AAATGAACCTGTAGTTTCA----TCC---ATATTTTCAAAAGCAAAACTTCTTCTACTAAAATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112707945 116 + 115148730 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATTCCATATTCCGACTAAGCAGAG-AAATGAACCTGTAGTTTCA----TCC---ACATTTTCAAAAGCAAAA---CTTCTACTAAAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188989959 120 + 190429646 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATCCCATATTCTGACCAAGCAGAG-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932734 120 + 189454096 TTGGAAAGCTTCTGTAA-AAACTGGCCCCTTCATTATTATCCCATATTCTGACCAAGCAGAG-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324467 120 - 25927173 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATCCCATATTCTGACCAAGCAGAG-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353764 120 + 4669795 TTGGAAAGCTTGTGTAA-AAAGTGGCCCCTTCATTATTATCCCATATTCTGACCAAGCAGAG-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311846 120 + 135778131 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATCCCATATTCTGACCAAGCAGAT-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764507 120 - 2847728 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTATTATCCCATATTCTGACCAAGGAGAG-AAATGAACCTGTAATTTCA---TTCC---ACATTTTCAAAAGCAAAATTTCTTCTACTAAAATAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880357 120 + 2368649 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCATTCTTATCCCATCTTCTGACTAAGCAGAG-AAATGAACCTGTAGTTTCA---TTCC---ACATTTTCAAAAGCAACATTTCTTCTACTAAAATAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610352 116 - 190850796 TTGGAAATCTTCCGTAA-AAAGCGGCCCCTTCAGTATTATTCCATTTTCTCACT----GGAA-AAATGAACCTGTAGTTTCA---TTCC---AAATTTTCCAAGGCAAAACTTCTTATACTAAAAGAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993652 116 - 2196201 TTGGAAAGCTTCTGTAA-AAAGCGGCCCCTTCAGTATTATTCCATTCTCTCACT----GGAA-AAATGAACCTGTAGTTTCA---TTCC---AAATTTTCCAAGGCAAAACTTCTTATACTAAAAGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388494 116 - 5030052 TTGGAAAGCTTCTGTAA-AAAGTGGCCCCTTCAGTATTATTCCATTTTCTCACT----GGAA-AAATGAACCCGTAGCTTCA---TTCC---AAGTTTTCCAAAGCAAAACTTCTTATACTAAAAGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17506973 120 - 93316391 TTGGAAGGCTTCTGTTA-AAAGTGTCCCCTTGGTTATTACTCCATTTCCTGACTAAGAAGAA-AAATGAACCAGAACTCTCA---CTTC---AAATTTTCAAAAGCAAAACTTCTTATGGTAAAAAAA i micMur3.chr14 I 267 I 32 s proCoq1.NW_012145301v1 3946177 120 + 3993831 TTGGAAAGCTTCTGTTA-AAAGTGTCCCCTCGGTTATTACTCCATTTCCTGACTAAGCAGAA-AAATGAACCAGAACTTTCA---CACC---AAATTTTCAAAAGCAAAACTTTTTATACTAAAATAA i proCoq1.NW_012145301v1 I 266 C 0 s otoGar3.GL873580 11231063 120 - 11315646 -CTGGAATCTTCTGTAACAAAGTGTCCCTGTGATTGTTACCGTGTTTCCTGACTAAGCACAA-AAATGAACCAGAACCTTCA---CTTC---AAACTTTCACAAGCAAAAATTTTTATACTTAAATAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86594324 78 - 129401213 TTAATAACCTTCTATAA-G----TGTCTCTTGGTTGTC-TCTCATCTCCTGACAAAGCAGAA-TCATGAACATCTGCCTTCA---TAT---------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16949629 123 - 59632846 CAGGAAACCTTCTGTGC-AAAGTGTCCCATCAGTGATTACTACATTCCCAGACTAAGCAGAA-AAATGCCTCTGTGCTTGCATGCTTGC---ACATTTTTAAGAACAAAACTTCATATACTAAATTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442690 124 - 2520184 TTGGAAAGCTTGTGTAG-AAAGCATCCAGTTGCTTATCACTCCATTGCTTGACTAAGCAGAACAAACGAATCTGGGCTTTCA---CTCCCTTAAAGTTTCAGAAGCAAAACAGCCTATATTAAAATAA i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13097748 1627 - 14256875 M a score=309538.000000 s hg38.chr4_KI270789v1_alt 110638 30 + 205944 CTTGCTAC-AAAAGGTATGTACTAGTTTGGG s panTro5.chr4 192898002 30 + 194502333 CTTGCTAT-AAAAGGTATGTACTAGTTTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781677 30 + 195804263 CTTGCTAT-AAAAGGTATGTACTAGTTTGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818960 30 + 4876863 CTTGCTAT-AAAAGGTATGTACTAGTTTTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708061 30 + 115148730 CTTGTTTT-AAAAGGTGTGTACTAGTTGGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990079 30 + 190429646 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932854 30 + 189454096 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324587 30 - 25927173 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353884 30 + 4669795 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311966 30 + 135778131 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764627 30 - 2847728 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880477 30 + 2368649 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610468 31 - 190850796 CTTGCTATAAAAAGGTATGTACTAGTTCAGG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993768 29 - 2196201 CCTGTTAT--AAAGGTAGGTACTAGTTCAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388610 30 - 5030052 CTTGTTAT-AAAAGGTATGTACTAGTTCAGG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3946297 30 + 3993831 CTTTTTAT-AAAATACGTATGTAAGTTCAGA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11231183 30 - 11315646 CTTTTTAT-AAAATTCATATACAAGTTCAGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86594402 10 - 129401213 ---------------------CAAGTTCAAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16949752 30 - 59632846 CTTTTTCT-AAATGGCATATACAAATACAGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442814 29 - 2520184 CCTTTTA--AAAAGGCGTATGCAAGCACAGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17507093 32 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=2607395.000000 s hg38.chr4_KI270789v1_alt 110668 210 + 205944 A--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTCATAATCCCCCTAATAATTGAC------------TGGGGTCAGAGTATCTCTAGGG-C--GA-TGCTGCACATTTTAAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTCAGAGA---ATGCTCTTGAAGA----TCTGTTTCCCATTGACTTTTCAAATCCTGTTAATTGCTTATACAGTAAGCGTTAAAAGTC s panTro5.chr4 192898032 210 + 194502333 A--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTCATAATCCCCCTAATAATTGAC------------TGGGGTCAGAGTGTCTCTAGGG-C--GA-TGCTGCACATTTTAAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTCAGAGA---ATGCTCTTGAAGA----TCTGTTTCCCCTTGACCTTTCAAATCCTGTTAATTGCTTATACAGTAAGCGTTAAAAGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781707 210 + 195804263 A--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTCATAATCCCCCTAATAATTGAC------------TGGGGTCAGAGTGTCTCTAGGG-C--GA-TGCTGCACATTTTAAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTCAGAGA---ATGCTCTTGAAGA----TCTGTTTCCCCTTGACCTTTCAAATCCTGTTAATTGCTTATACAGTAAGCGTTAAAAGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3818990 210 + 4876863 A--------------TTTTATTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTCATAATCCCCCTAATAATTGAC------------TGGGGTCAGAGTGTCTCCAGGG-C--GA-TGCTGCACATTTTAAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTCAGAGA---ATGCTCTTGAAGA----TCTGTTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTATACAGTAAGCGTTAAAAGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708091 210 + 115148730 A--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTCATAATCCCCCTAATAATTGAC------------TGGGGTCAGAGTGTCTCTAGGG-C--AA-TGCTGCACATTTTAAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTCAGAGA---ATGCTCTTGAAGG----TCTGCTTTCCATTGACCTTTCAAATCCTGCTAATTGCTTATACAGTGAGCGTTAAAAATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990109 210 + 190429646 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTTTACAGTAAGCATTAAAAGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187932884 210 + 189454096 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTTTACAGTAAGCATTAAAAGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324617 210 - 25927173 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCGTTCACCTTTCAAATCCTGTTAATTGCTTTTACAGTAAGCATTAAAAGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3353914 210 + 4669795 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTTTACAGTAAGCATTAAACGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134311996 210 + 135778131 G--------------TTTTGTTTTTCTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTTCACAGTAAGCATTAAAAGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764657 210 - 2847728 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTATAATCCCCCTAATAATTGAC------------TGGAGTCACAGTGTCTCTAGGG-C--GA-CCCTGCACATTTTCAAACC-GCTT---------------------CACGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGT----TCTGCTTCCCATTGACCTTTCAGATCCTGTTAATTGCTTTTACAGTGAGCATTAAAAGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880507 210 + 2368649 G--------------TTTTGTTTTTTTCTGTCAGTTTGATAAATGCTGTTTGGACTCTTACAATCCCCCTAATAATTGAC------------TGGGGTCACAGTGTCTCTAGGG-C--GA-CCCTGCGCATTTTCAAACC-GCTT---------------------CATGGGGTGCTGGT------ATTTAGAGA---ATGCTCTTGAAGA----TCTGCTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTTTACAGTAAGCATTAAAAGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610499 223 - 190850796 GTTTTTGTTGTTGTTTTTTTTTTTTTTCTGTCAGTTTGATAAATGCTGCTTGGACTCTCATCATACCCGTAATAACTGAC------------TGGGGTCAGAGTATCTACAGGG-C--GA-CCCTGCACATTTTAAAAGC-GCTT---------------------CACGGGGTGGTGGT------ATTTCGAGA---ATGCTCTTGAAGA----TCAGTTTCCCATTGACCTTTCAAATCCTGTGAACTGCTTTTA-AGTAAACATTAAAAGTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 993797 208 - 2196201 G--------------TTGGTTTTTTTCCTGTCAGTTTGATAAATGCTGTTTGGACTCTCCTCATACCCGTAATAACTGAC------------TGGGGTCAGAGTGTCTATAGGG-C--AG-CCCT-CACATTTTAAAAGC-GCTT---------------------CACGGGGTGGTGGT------ATTTGGAGA---ATGCTCCTGAAGA----TCAGTTTCCCGTTGACCTTTCAAATCCTGTGAACTGCTTGTA-AGTAAGCATTGGAAGTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388640 208 - 5030052 G--------------TTTGTTTTTTT-CTGTCAGTTTGATAAATGCTGTTTGGACTTTGATCATACCCGTAATAACTGAC------------TGGGGTCAGAGTGTCTATAGGG-C--GA-CCCTGCACATTTTAAAAGT-GCTT---------------------CACTGGGTGGTGGT------ATTTCGAGA---ATGCTCTTGAAGA----TCAGTTTCCCATTGACCTTTCAAATCCTGTGAACTGCTTATA-AGTAAGCGTTAAAAGTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17507125 211 - 93316391 A--------------TTTTTTTTTTTTCTGTCAATTTGATTAATGCTGTTTGGACTCTCCTAATCCCCCTAGTAATTGCC------------TGGGGTCAGAGTGTCTGCAGGG-A--CA-ACCTGCACATTCCGGAGCTGGCTT---------------------CATGGGGTGCTGGT------ATTTGGAGA---ACACGCTTTAAGA----TGTGTTTTCCATTGACCTTTCCAGTCTTGTTAATTGCTTGTACAGCAGGCATTAAAAGTC i micMur3.chr14 I 32 I 480 s proCoq1.NW_012145301v1 3946327 209 + 3993831 ---------------ATTTTTTTTTTTCTGTCAGTTTGATTAATGCTGTTTGGACTCCCCCAATCCCCCTAGTAATTGAC------------TGAGGTCAAAGTGTCTACAGGG-A--CA-ACCTGCACATTCCAGAGCT-GCTT---------------------CACGGGGCGCTGGT------ATTTGGAGA---ATGCTCTTTGAGA----TGTGTTTTCCATTGACCTTTCCAGTCTTGTTAATTGCTTGTACAGCAAGCATTAAAAATC i proCoq1.NW_012145301v1 C 0 I 1 s otoGar3.GL873580 11231213 192 - 11315646 -----------------TTTTTTTTTTCTGTCAATTTGATTAATGCTGTTTGGACTCTCCTAATCCCCCTAGTAATTG----------------------GAAT-------GAG-A--CACCCCTGCTCATTCCAGGGCTGGCTT---------------------CATGGGGTGCTGGC------ACTTCCAGA---ATGCTCTTCAAGA----TGTGTCTTCCTTTGACCTTTCAAATCTTGTTAATTGCTTGCACAGTGAGCACTAAAAGTC i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86594412 234 - 129401213 A--------------TTAAGTGTTCTTGAATTAGTTTGATCAATGCTATTTTGA-TTTCATCAACTCCCTAGTATGTGAG------------TGCAGTCA-ATTAACTTATGGG-CATGA-TCCACTACATTCCTAATTG-GCTTTtgtgtgtgtgtgtgtgtgtgtgtgGGGGGGTGATGCAGAGACTTAGAGAATGATGATTTTTACAA----TCTGTTTTCCTTTAACCTTCTGAATTTCATTGGTTGCCTGTA------GATGTAAAATTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16949782 220 - 59632846 ----------------ATTTTTTTTCCCTGTCAGTTTGATTAATACTGTTTGGACTTTTGTAAACCATCTAATAACTGATGGGGTGGGGATGGGGGGTCAGAATGTCTATAGGGAT--GA-CCCTGCACATACCAGACTTGGCTT---------------------CATGGAGTGCTGGC------ATTTAGAGA---ATGCTCTTTAA------TCCATTTCCCATTGACCTTTCAAATCCTGTTAATTGCTTGTACAGTAAGCATTAAAAGGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1442843 188 - 2520184 ------------------GAGTTTTTCCCATCAG--TGATGGATGCTTTTGGGAGTCACATGAGCCACCCCATCACCAAC------------TGGGGT-----------------G--GG-GCCTGAGTGTCCCAGAGCCAGCTT---------------------TGGGGGCCGC-GGT------GTT--GAGG---GTAGCTGTGAAGGCCTCCCTGCTCTCCTCTGACCGT-CACATCCTGCTAATTGCCGG-GCAGGACGCGTTAAACACC i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13097748 1627 - 14256875 M a score=277023.000000 s hg38.chr4_KI270789v1_alt 110878 21 + 205944 AGGCCTGGCAAAATCAAGGAA s panTro5.chr4 192898242 21 + 194502333 AGGCCTGGCAAAATCAAGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781917 21 + 195804263 AGGCCTGGCAAAATCAAGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819200 21 + 4876863 AGGCCTGGCAAAATCAAGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708301 21 + 115148730 AGGCCTGGCAAAATCAAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990319 21 + 190429646 AGGCCTGGCGAAATCAAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933094 21 + 189454096 AGGCCTGGCGAAATCAAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324827 21 - 25927173 AGGCCTGGTGAAATCAAGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354124 21 + 4669795 AGGCCTGGCGAAATCAAGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312206 21 + 135778131 AGGCCTGGCGAAATCAAGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764867 21 - 2847728 AGGCCTGGCGAAATCAAGGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880717 21 + 2368649 AGGCCTGGCGAAATCAAGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610722 21 - 190850796 AGGCCTGGCGAAATCAGGGAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994005 21 - 2196201 AGGCCTGGCGAAATCATGGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388848 21 - 5030052 AGGCCTGGTGAAATCATGGAA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3946537 21 + 3993831 AAGTCTGGTAAAATCAAGGAA i proCoq1.NW_012145301v1 I 1 I 412 s otoGar3.GL873580 11231406 21 - 11315646 AAGCCTGGCAAAACCAAGGAC i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86594646 4 - 129401213 -----TGGC------------ i mm10.chr8 C 0 C 0 s canFam3.chr16 16950002 21 - 59632846 AAGCCTGGCAAAGTCCAGAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443031 21 - 2520184 GAGCCTGGCAAAATCAAGGAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17507336 480 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=3498040.000000 s hg38.chr4_KI270789v1_alt 110899 368 + 205944 GCTGCAGGGAGCAGATGAAGTTTTCATGCGCAGGAGCACAGCTAGGATGAAACGAGAAGTAACTGCCGTGTCCAGTGTGGCCCAGGTGGAGAGCTGGGGGTG--TGCC----ATGAGACTGTTAGGTCCAGAGGAAGTACGCTCGATTCGCTTGATCTCGGGGG-TAACTGAAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTtctgaaactattgagacctctgacacttcaaatccttaaacgcagga-aaaactaccaattgattagaatg-cccttgagaagattgaagtatgagatggtg-------ttggactagtggtcatt--tgtttc-aatctcaagattctgtatttcCTATTCTGAAATTTCTATTTATTATAAAT s panTro5.chr4 192898263 368 + 194502333 GCTGCAGGGAGCAGATGAAGTTTTCATGCGCAGGAGCACAGCTAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGCCGGAGGTG--TGCC----ACGAGACTGTTAGGTCCAGAGGAAGTACACTCGATTTGCTTGATCTCGGGGG-TAACTGAAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAACGATtgagacctctgacacttcaaatccttaaacacagga-aaaactaccaattgattagaatg-cctgtgagaagattgaagtatcagatggtg-------ttggactagtgctcatt--tgtttc-aatctcaagattctgtatttcCTATTCTGAAATTTCTATTTATTATAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192781938 368 + 195804263 GCTGCAGGGAGCAGATGAAGTTTTCATGTGCAGGAGCACAGCTAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGCTGGAGGTG--TGCC----ACGAGACTGTTAGGTCCAGAGGAAGTACACTCGATTCGCTTGATCTCGGGGG-TAACTGAAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAACGATtgagacctctgacacttcaaatccttaaacacagga-aaaactaccaattgattagaatg-cctgtgagaagattgaagtatcagatggtg-------ttggactagtgctcatt--tgtttc-aatctcaagattctgtatttcCTATTCTGAAATTTCTATTTATTATAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819221 368 + 4876863 GCTGCAGGGAGCAGATGAAGTTTTCATGCGCAGGAGCACAGCTAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGCTGGGGGTG--TGCC----ACGAGACTGTTAGGTCCAGAGGAAGTAGACTCAATTCGCTTGATCTCGGGCG-TAACTGAAAAGACAGCAGCTCCCTCTAGAAG---------TCCT-TTtctgaaactattgagacctccgacacttcaaatccttaaacacagga-aaaactcccaattgattagaatg-cctgtgagaagactgaagtatcagatggtg-------ttggactagtgctcatt--tgtttc-aatctcaagattctgtatttcCTATTCTGAAATTTCTATTTATTATAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708322 367 + 115148730 GCTGCAGGGAGCAGATGAAGTTTTCATGCGCAGGAGCACAGCTACGATGGAATGAGAAGTAACTACCACGTCCAGTGTGGCCCAGGTGGAGAGCTGGGGGTG--TGCC----GCGAGACTGTTAGGTCCAGAGGAAGTAGACTTGATTCGCTTGATCTCGGG-G-TAACTGAAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TCTCTGAAATTATTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCAACTGATTAGAATG-CCTGTGAGAAGATTGAAATTTCAGATGGTG-------TTGGACTAGTGGTCATT--TGTTTC-AATCTCAAGACTCTGTATTTCCTATTCTGAAATTTCTATTTATTATAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990340 370 + 190429646 GCTGAAGGGAAGAGATGAAGTTTCTATGCGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCC----ACGAGACTGTTTGGTCCAGAGGAAGCTGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCGATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGGTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCAAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933115 370 + 189454096 GCTGAAGGGAAGAGATGAAGTTTCTATGCGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCC----ACGAGACTGTTTGGTCCAGAGGAAGCTGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCGATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGGTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCGAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24324848 370 - 25927173 GCTGAAGGGAAGATATGAAGTTTCTATGCGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAATGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCC----ACGAGACTGTTTGGTCCAGAGGAAGCTGACTCAATTCACTTGATCTCGGGGG-TAACTGGAGAGAGAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACGCAGGA-AAAACTACCGATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGGTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCGAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354145 370 + 4669795 GCTGAAGGGAAGAGATGAAGTTTCCATGCGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAGCGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCC----ACGAGACTGTTTGGTCCAGAGGAAGCCGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCAATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGGTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCGAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312227 370 + 135778131 GCTGAAGGGAAGAGATGAAGTTTCCATGCGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCC----ACGAGACTGTTTGGTCCAGAGGAAGCCGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCGATTGATGAGAATG-CCTGTAAGAAGACTGAAATATCAGGTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCGAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2764888 374 - 2847728 GCTGAAGGGAAGAGATGAAGTTTCCATGCACAGGAGCACAGCCAGGATGAAACGAGAAGTAACTGCCGCGTCCAGTGTGGCCCAGGTGGAGAGTGGGGTGTGTCTGCCACGAACGAGACTGTTTGGTCCAGAGGAAGCCGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGATAGCAGCTCTCTCTAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCGATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGTTAGTG-------TTGGACTAGTGGTCATT--TGTTTC-AGTCTCGAGATTCTATATTTCCTATTCTGAAATTTCTGTTTATTATAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 880738 370 + 2368649 GCTGAAGGGAAGAGATGAAGTTTCCATGTGCAGGAGCACAGCCAGGATGAAACGAGAAGTAACTACCGTGTCCAGTGTGGCCCAGGTGGAGAGTGGGCTGTGTCTGCC----ATGAGACTGTTTGGTCCAGAGGAAGCAGACTCGATTCGCTTGATCTCGGGGG-TAACTGGAGAGAGAGCAGCTCTCTCCAGAAG---------TCCT-TTTCTGAAGTTACTGAGACCTCTGACACTTCAAATCCTTAAACACAGGA-AAAACTACCGATTGATTAGAATG-CCTGTAAGAAGACTGAAATATCAGGTGGTG-------TTGGACTAGTGGTCATC--TGTTTC-AGTCTCAAGATTCTATATTTCCTATTCTGAAATTTCTATTTATTATAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189610743 347 - 190850796 GCTGAAGGGAACAGATGAAGTTTTCATGCACAGGACCACAGCCAGGTTGAAAGGGGAAGTAACCACCGTGTCCAATGTGACCCAGGTGGAGAGCGGGG-GTGTTTG--------------------------GAAAGTGGACTCGATTCGCCTGATCCGGGGGG-TAACTGAAGAGATAGTAGCTGTCTCTAGAAG---------TCCT-TTTCTGAAATTATGGAGACCTCTGACACTTCCAATACTTAAACACAGGAAAAAAGTACCAATGGATGAGGATC-CCTGTGAGAAGATT-CAGTATCAGAGGGTG-------CTGGACTGGCGGTCATT--TGTTTC-AATGTCAGGATTCTCTATTTCCTGTTCTGCAGTTTCTGTTTATTATAAAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994026 370 - 2196201 GCTGAAGGGAACAGATGAAGTTTTCATGCGCAGGAGCACAGCCAGGTTGAAACGGGAAGTAACCACCGTGTCCAATGTGGCCCAGGTGGAGGGCGGGG-GTGTTTGAC----ATGAGACTGTTCCTTCCAGAGAAAGTGGACTCGATTCGCTCGATCTTGGGGG-CAACTGAAGAGATAGTAGCTGTCTCTAGAAG---------TCCT-TTTCTGAAATTATTGAGACCCCTGACACTTCAAATACTTAAAGACAGGAAAAAACTACCAATGGGTGAGAATA-CCCGTGAGAATATTCCAGTATCAGGTGGTG-------TTGGACTGGTGGTCATT--TGTTTC-AGCCTCAAGATTCTATATTTCCTATTCTGCAGTTTCCATTTATTATAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3388869 366 - 5030052 GCTGCAGGGAACAGATGAAGTTTTCATGCACAGGACCACAGCCAGGTTGAAACGGGAAGTAACCGCTGTGTCCAATGTGGCCCAGGTGGAGAGTGGGG-GTGTTTGAC----ATGAGACTG----TTCCAGAGAAAGTGGACTCGATTTGCTTGATCTCGGGGG-TAACTGAAGAGATAGTAGCTGTCTCTAGAAG---------TCCT-TTtctgaaattattgagacctctggcacttcaaatacttaaacacaggagaaaactactaacggatgagaaca-cctgtgagaagattcaagtatcagatggtg-------ttggactggtgctcatt--cgtttc-aatcccaaaattgtatatttcCTATTCTGCAGTTTCCATTTATTACAAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11231427 345 - 11315646 -AAAGAGGGAGCTAATGCAGTTGTCACTGGAAGGAGCACAGCCAGGATGAAGGTGCAGGAAGCT--------------------GGTGGAATGCCGGC----CCTGTT----GAGACACTCCCAAGG-CAGGGGGAGTGGGCTCCTTCAGCCTGACCCTAGGGG-TCACGAAGGAGACAGCTGTCCTCTGGAGGAC---------CCAT-CTTCTGAAATTACTGAGATGCCTGACCTTTCAAATGTTGAAACACAGGA-TAAAGTACCCATTGATTGGAAAA-CTTCAGAGAAGATTTGGATACCAGATGGAG-------CTGAACTAATGCAAGTT--TATTTCTCATCTCAAGGCTCTCTGTTTCCTTTCCAGAAATTTCTATTGAATTTACAT i otoGar3.GL873580 C 0 I 24 s mm10.chr8 86594650 291 - 129401213 -----------CAGATGAGGCCT-------------------------------------------------------------------------GCTATTTTTGCT----ATGAGGTTGTTCAGTAGAAAGGAAGTAGATTT-ATTTACTTGATCACAACTA-TAACTGAGGATATAATGATTATCTTTAGGAAGTATTTTTTTATT-TTCCTGAAACTATTGACTGACCAGAGACTTGAAATAGTTAAACAGGACA-AAATC-----AGTGATGTGAATATTTTATGAGAAGATT-CAATATCAGATGCTG-------ATGGATTAATGAAAAACAGAGTTTC-TAATTCAAGGTTCTAAGTTTCCCATTCAGAAATGTTTATTTACTAAAAAT i mm10.chr8 C 0 I 1 s canFam3.chr16 16950023 334 - 59632846 GCTGAAAGGAAGATGTAAAGTTTTCATTCAAAGGA------------TGAAACAAATAACAGGAACCATGTCAAATGTGGACCAGGTGGGAAACAGGGAACATTTGCT----GTGAGACTGTTTGGTATAGAGGAAGTAGACTAATTCAGCTTGACCCCAAGGG-GAACTGAGAAGATAGCAGTCCTCTCTGGGAG--------------------AAATTACTGGGACCCTTGACACCTCAAATGTGT-AACAAAGG--TAAACCATCAATTCATGGGAATA-CTCTCAAGAAGATTCAAATATCAGATGGTA-------TCAGA-----------T--TATTTCTAATTTCAAGATTCTGCA--TCATCTTCTGAAATTTCTATTTTCTTCAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443052 338 - 2520184 -CTGGAGGGA--AGATGGGGCGTGCATGCA-AGGAGCACTGCCGGAAGATCTCAAGATG-AAGAGCCATGTTGGATGCTGACCAGGT-------------------CC----A-------GCTGGGGCAAGTGGGAGC--------TCAGATTGGTCCAGAAGGCTACCTGAGGGGACAGTCAGTGTCCACAGGAG---------CCTTCCTTCTGAAATGACCGA--CCTCTGTGGCTTCAGACGTTTAGACACAGGG-TCAAC-ACTGATTGATTGGAAGC-CTTTCAAGAAGATTCAAATATCTGCTGGTACAGGACTTTGGACTAGCCAACATT--TATTTCCAACATCAACATACTACATTTTCTGTTCTGCAATTGTTATTTACTATAAAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3946558 412 + 3993831 I e micMur3.chr14 17507336 480 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M a score=282248.000000 s hg38.chr4_KI270789v1_alt 111267 30 + 205944 CTTATAATCTTTAAAATTCTA-TTTTTCTAA- s panTro5.chr4 192898631 30 + 194502333 CTTATAATCTTTAAAATTCTA-TTTTTCTAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782306 30 + 195804263 CTTATAATCTTTAAAATTCTA-TTTTTCTAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819589 30 + 4876863 CTTATAATCTTTAAAATTCTA-TTTTTCTAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708689 30 + 115148730 CTTGTAATCTTTAAAATTCTA-TTTTTCTAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990710 30 + 190429646 CTTGTAATCTTTAAAATTCTA-TTTTTACAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933485 30 + 189454096 CTTATAATCTTTAAAATTCTA-TTTTTACAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325218 30 - 25927173 CTTATAATCTTTAAAATTCTA-TTTTTACAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354515 30 + 4669795 CTTATAATCTTTAAAATTCTA-TTTTTACAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312597 30 + 135778131 CTTATAATCTTTAAAATTCTA-TTTTTACAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765262 30 - 2847728 CTTATACTCTTTAAAATTCTA-TTTTTACAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881108 31 + 2368649 CTTATAATCTTTAAAATTCTATTTTTTACAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611090 30 - 190850796 CCGATAATCTTTAAAATTCTA-TTTTTACAA- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994396 30 - 2196201 CTGATAATCTTTAAAATTCTA-TTTTTACAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389235 30 - 5030052 CTGATAATCTTTAAAATTCTA-TTTTTACAA- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86594942 30 - 129401213 TTATCTATCTTTTAAATTCTA-TTTTTCAAA- i mm10.chr8 I 1 I 779 s canFam3.chr16 16950357 29 - 59632846 CTTAAAATCTTTAAAATTCTA-TTTAAAAA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443390 28 - 2520184 ---ATCATAGTTGAAAGAATT-CACTTAAAAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3946558 412 + 3993831 I e micMur3.chr14 17507336 480 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=9661.000000 s hg38.chr4_KI270789v1_alt 111297 1 + 205944 G s panTro5.chr4 192898661 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782336 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819619 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708719 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990740 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933515 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325248 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354545 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312627 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765292 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881139 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611120 1 - 190850796 G i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994426 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389265 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16950386 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443418 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3946558 412 + 3993831 I e micMur3.chr14 17507336 480 - 93316391 I e mm10.chr8 86594972 779 - 129401213 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=723444.000000 s hg38.chr4_KI270789v1_alt 111298 66 + 205944 TCTGAGATGTGGTTGAATTTCAGTTTATAAGAAGAAATAAGGCATATGTGAATTCCCTTAACAAAT--- s panTro5.chr4 192898662 66 + 194502333 TCTGAGATGTGGTTGAATTTCAGTTTATAAGAAGAAATAAGGCATATGTGAATTCCCTTAACAAAT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782337 66 + 195804263 TCTGAGATGTGGTTGAATTTCAGTTTATAAGAAGAAATAAGGCATATGTGAATTCCCTTAACAAAT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819620 66 + 4876863 TCTGAGATGTGGTTGAATTTCAGTTTATAAGAAGAAATAAGGCATATGTGAATTCCCTTAACAAAT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708720 66 + 115148730 TCTGAGATGTGGTTGAATTTCAGTTTATAAGAAGAAATAAGGCATATGTGAATTCCCTTAACAAAT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990741 66 + 190429646 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933516 66 + 189454096 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325249 66 - 25927173 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354546 66 + 4669795 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312628 66 + 135778131 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765293 66 - 2847728 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGGCATATATGAATTCCCTTAACAAAT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881140 66 + 2368649 TCTGAGATGTGGCTGAATTTCAGTTTATAAGAAGAAATAAGACATATGTGAATTCCCTTAACAAAT--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611121 66 - 190850796 TCTGAGTTGTGGTTGAATTTCCCTTTCTAAGATGAAATAAGGCGCACGTGAATTCCCTTAACAAAT--- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994427 66 - 2196201 TCTGAGTTGTGGTTGGATTTCCCTTTATAGGATGAAATAAGGCACATGTGAATTCCCTTAACAAAT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389266 66 - 5030052 TCTGAGTTGTGGTGGAATTTCCCTTCGTAAGATGAAATAAGGCGCATGTGAGTTCCCTTAACAAAT--- i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3946970 65 + 3993831 TCTGAGATGAAGTTGAATTTCAATTAATAGGGAGAAATAAGGCACATGTGAATT-CTTAAAAAAAT--- i proCoq1.NW_012145301v1 I 412 I 2 s canFam3.chr16 16950387 64 - 59632846 TTTGAGACGAGGTTGGATTTCCATTTATAAGGAGAAATCAGGCATGAGTGATTT--TTTAAAAAAT--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443419 67 - 2520184 TCTGATAGGAGGTTTGATTTCAGTTTGTAAGGAGAAATAAGGC--ATGCCCATTTCCTCAAAAAAAAAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17507336 480 - 93316391 I e mm10.chr8 86594972 779 - 129401213 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=335725.000000 s hg38.chr4_KI270789v1_alt 111364 26 + 205944 CACACAGTTCAATTCCTGATAGTTGT s panTro5.chr4 192898728 26 + 194502333 CACACAGTTCAATTCCTGATAGTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782403 26 + 195804263 CACACAGTTCAATTCCTGATAGTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819686 26 + 4876863 CACACAGTTCAATTCCTGATAGTGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708786 26 + 115148730 CTCACAGTTCAATTCCTGATAGTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990807 26 + 190429646 CACACAGTTCAATTCCTGATAGTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933582 26 + 189454096 CACACAGTTCAATTCCTGATAGTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325315 26 - 25927173 CACACAGTTCAATTCCTGATAGTTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354612 26 + 4669795 CGCACAGTTCAATTCCTGATAGTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312694 26 + 135778131 AGCACAGTTCAATTTCTGATAGTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765359 26 - 2847728 CGCACAGTTCAATTCCTGATAGTTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881206 26 + 2368649 CGCACAGTTCAATTCCTGATAGTTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611187 26 - 190850796 CACACAGTTCAATTCCTGATATTTGT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994493 26 - 2196201 CACACAGTTCAATTCCTGATATTTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389332 26 - 5030052 CACACAGTTCAATTCCTGATCTTTGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17507816 26 - 93316391 CACAAAGCTCAATTTCTGATATTTGT i micMur3.chr14 I 480 C 0 s proCoq1.NW_012145301v1 3947037 26 + 3993831 CACACAGCTCAATTTCTGGTATTTGT i proCoq1.NW_012145301v1 I 2 C 0 s canFam3.chr16 16950451 26 - 59632846 CATATAGCCTAATCCTTGATATTTGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443486 26 - 2520184 CATATGGTTCAATCCCTGATATTTGT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86594972 779 - 129401213 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=1832973.000000 s hg38.chr4_KI270789v1_alt 111390 145 + 205944 TACCTAACGTTTATAATGTTTCTT--TTTATCAAATGATCTTCAATATTCCCTGCCATGAAATGGAAGATTAGTGAA-TTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT s panTro5.chr4 192898754 145 + 194502333 TACCTAACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATGAAATGGAAGATTAGTGAA-TTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782429 145 + 195804263 TACCTAACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATGAAATGGAAGATTAGTGAA-TTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819712 145 + 4876863 TACCTAACGTTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCTATGAAATGGAAGATTAGTGAA-TTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708812 145 + 115148730 TACCTAACGTTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAA-TTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990833 146 + 190429646 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTCGATAGAACTAACTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933608 146 + 189454096 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTGGATAGAACTAACTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325341 146 - 25927173 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTGGATAGAACTAACTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354638 146 + 4669795 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTGGATAGAACTAACTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312720 146 + 135778131 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGTAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTGGATAGAACTAACTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765385 146 - 2847728 TACCTGACATTTATAATGTTTCTT--TTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTAAAGTCTGTTCTGCCAAATTGAAGTACTTGGATAGAACTAACTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881232 146 + 2368649 TACCTGATATTTATAATGTTTCTT--CTTATCAATTGATCTTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAAGTTTTTTA---CTAAATTATTTTGGCCTTGAAGTCTGTTCTGCCAAATTGAAATACTTGGACAGAACTAACTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611213 148 - 190850796 TACCTAGCGTTTATGATGTTTTTT--TAAATCAATTGATCTTCAGTATTCCCTGCTGTTAAATGGAAGATTAGTGAA-TTTTCTACTACTAAATTATGTTGGCCTTAAAGTCTGTTCTGCCAGATTGAAAGACTTGGACCGAATTAACTTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994519 147 - 2196201 TACCTAACGTGTATGATGTTTTTT--TTAATCGATTGATCTTCATTATTCCTTGCCATTAAATGGAAGATTAGTGAG-TTTTCTACTGCTAAATTAT-TTTGCCTTAAAGTCTGTTCTGCCAAATCGGAAAACTTGGACAGAATTAACTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389358 145 - 5030052 TACCTAACGTTTATGA---TTTTT--TTGATCGATTGATCGTCAATATTCCCTGCCATTAAATGGAAGATTAGTGAA-TTTTCTACTACTAAATTATTTTGGCCTTAAAGTCTGCTCTGCCAAATCGAAAAACTTGGACAGAATTAACTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17507842 147 - 93316391 TACATAATGTTTATAATTTTCCTTTCTTTATAAATTGATCTTCAACATTCCCTCCCATTAAAGGAAAGATTAGTGGA-TTTTCTG---CTGAATTATTTTGGGCTTAAATTCTGTTCTGCCAAATTGGAAAACTTGAACAAAATTAACTTT i micMur3.chr14 C 0 I 187 s proCoq1.NW_012145301v1 3947063 147 + 3993831 TACATAATGTTTATAATGTTCCTTTCTTTATAAACTGATCTTCAATATTCCCTCCAACTAAAGGAAAGATGAGTGGA-TTTTCTA---CTAAATTATTTTGGGCTTAATTTCTGTTCCACTTAATTGGAAAACTTGGACAAAATTAACTTT i proCoq1.NW_012145301v1 C 0 I 922 s mm10.chr8 86595751 144 - 129401213 tatgtaATATTTATAACATCTCCT--TCTGTTAAATGGTCTTTATTATTTCTTGCCACTAAAAGCAAGACTGACCAA-TTTTCTG---CAAAGTTAT-TTGTGTTTAAATTTTGCTTTGCCAAATTAGAAAACTTTGACAAAATAAACGTA i mm10.chr8 I 779 C 0 s canFam3.chr16 16950477 140 - 59632846 CACATAACATTTATAATGTTCCTT--CCTATAAATTGGTCTTCAATATTCCCCATCATTAAAAGGAGATTTAGTGAA-TTTTCTA---TGACATTATTTTGGGCTTCAAATCTG-----CAAAATTTCAAAATTTGGACAAAATTAACTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443512 140 - 2520184 CACATAATATTTATTATGTTCCTT--TCTCTAAGACATTCCTCAATATTCCCTGTTGTT----GGTAGATTAGTGGA-TTTTCTA---CTAAATTATTTTGAGCTCAAAGTCCTTTTTGCCAGAGC-AGGCACTTGAACAAAATTAACCTT i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=762713.000000 s hg38.chr4_KI270789v1_alt 111535 85 + 205944 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATATTTTCTGAGCAGAAAACTCATTCTTCTTTTT s panTro5.chr4 192898899 85 + 194502333 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782574 85 + 195804263 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819857 85 + 4876863 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112708957 85 + 115148730 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188990979 85 + 190429646 TGCTGT-GCAAAGTGGACAGTTAGCCATGG-----AGTGAGCGACTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933754 85 + 189454096 TGCTGT-GCAAAGTGGACAGTTAGCCATGG-----AGTGAGCGACTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325487 85 - 25927173 TGCTGT-GCAAAGTGGACAGTTAGCCATGG-----AGTGAGCGACTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354784 85 + 4669795 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTGTTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312866 85 + 135778131 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765531 85 - 2847728 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTGTTGAGAAGAA--A---GAATACTTTCTGAGCAGAAAACTCATTCTTCTTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881378 85 + 2368649 TGCTGT-ACAAAGTGGACAGTTAGCCATGG-----AGTGAGCTATTGAGAACAA--A---GAATACTTTCTGAGCAGAAAATTCATTCTTCTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611361 68 - 190850796 TGCTGT-AC-AAGTGGACAGTT-----------------AGCTATTGA-AAGAC--A---GAAAATTTTCTGAGCAGAAAACTCA---TTCTTTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994666 83 - 2196201 TGCTGT-AC-AAGTGGACAGTTAGCCATGG-----AGTAAGCTATTGA-AAGAA--A---GAAAATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389503 83 - 5030052 TGCTGT-AC-AAGTGGACAGTTAGCCATGG-----CATAAGCTATTGA-AAGAA--A---TAAAATTTTCTGAGCAGAAAACTCATTCTTCTTTTT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86595895 69 - 129401213 ---TGTCACAGAGTAGGTATCTAGCTACTG---ACACTAAGACCTTTAGAA---------------------AGTAGGGAAGTTATTCTTTTTCTT i mm10.chr8 C 0 I 1160 s canFam3.chr16 16950617 83 - 59632846 GGCTAT-AGACAGTGGATAGCTATTGAT-------AGTAAGCTATTAAGAAGAAATA---GAAAATTTACTGAAAAGAAAATTCATTATCTTTC-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443652 91 - 2520184 GACCCT-ACAGAGTAAGCAGTTACTTATGAGAGACAGTAAGCTATTGCAGAGGA--AGTGGGAAACTTACTGGACAGGTAACTCCCTCCTTTTC-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17507989 187 - 93316391 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=529974.000000 s hg38.chr4_KI270789v1_alt 111620 54 + 205944 CTAATAGCTGTATTAGGAGATTGAATTGGGGCCACTATGCTCTTTCTCTTGGGC s panTro5.chr4 192898984 54 + 194502333 CTAATAGCTGTATTAGGAGATTGAATTGGGGCCACTATGCTCTTTCTCTTGGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782659 54 + 195804263 CTAATAGCTGTATTAGGAGATTGAATTGGGGCCACTATGCTCTTTCTCTTGGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819942 54 + 4876863 CTAATAGCTGTATTAGGAGATTGAATTGGGGCCACTATGCTCTTTCTCTTGGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709042 54 + 115148730 CTAATAGCTATATTAGGAGATTGAATTGGGGCCACTACGCTCTTTCTCTTGGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991064 54 + 190429646 CTAATAGCTATATTAGGAGATGGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933839 54 + 189454096 CTAATAGCTATATTAGGAGATGGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325572 54 - 25927173 CTAATAGCTATATTAGGAGATGGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354869 54 + 4669795 CTAATAGCTAGATTAGGAGATTGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134312951 54 + 135778131 CTAATAGCTATATTAGGAGATTGAATTGGGGCCACTGTGCTCTTTCTCTTGGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765616 54 - 2847728 CTAATAGCTAGATTAGGAGACTGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881463 54 + 2368649 CTAATAGCTATATTAGGAGATTGAATTGGGGCCACTGCGCTCTTTCTCTTGGGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611429 50 - 190850796 CTAATAGCTATATTAGGAGATCGGATTGGGACCGCCACAC----TCTCTCCGGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 994749 53 - 2196201 CTCATAGCTATGTTAGGAGATTGTACTGGGACCACTACACT-TTTCTCTTGGGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389586 54 - 5030052 CTAATAGCTATATTAGGAGATTGGATTGGGACCACTACACTCTTTCTCTGGGGC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16950700 54 - 59632846 CTAACAACTATATCATGAGATTGAATTGAGGCCACCATCCCTTTTCTCTTGGGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443743 54 - 2520184 CTAAGAGTGGTATCCTGGGACTGCATCGGGACCACCATACCCTTCCTGGGGGAC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17507989 187 - 93316391 I e mm10.chr8 86595964 1160 - 129401213 I e saiBol1.JH378165 13097748 1627 - 14256875 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=130903.000000 s hg38.chr4_KI270789v1_alt 111674 13 + 205944 AGGAAACATGTAC s panTro5.chr4 192899038 13 + 194502333 AGGAAACATGTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782713 13 + 195804263 AGGAAACATGTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3819996 13 + 4876863 AGGAAACATGTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709096 11 + 115148730 AGGAAAC--GTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991118 13 + 190429646 AGGAAACATGTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933893 13 + 189454096 AGGAAACATGTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325626 13 - 25927173 AGGAAACATGTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354923 13 + 4669795 AGGAAACATGTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313005 13 + 135778131 AGGAAACATGTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765670 13 - 2847728 AGGAAACATGTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881517 13 + 2368649 AGGAAACATGTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611479 13 - 190850796 AGGAAACATGTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099376 13 - 14256875 AGGAAACATGTAG i saiBol1.JH378165 M 1627 C 0 s cebCap1.NW_016107886v1 994802 13 - 2196201 AGCAAACATGTAG i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3389640 13 - 5030052 AGGAAACATGTAG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16950754 12 - 59632846 AGGAAAGA-ATAC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1443797 10 - 2520184 AGGAAA---GAAC i dasNov3.JH570353 C 0 I 1 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17507989 187 - 93316391 I e mm10.chr8 86595964 1160 - 129401213 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=795345.000000 s hg38.chr4_KI270789v1_alt 111687 65 + 205944 TTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC s panTro5.chr4 192899051 65 + 194502333 TTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782726 65 + 195804263 TTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820009 65 + 4876863 CTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709107 65 + 115148730 TTTT-----TTTGCAGTCAGTAACGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGACTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991131 64 + 190429646 -TTC-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933906 64 + 189454096 -TTC-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325639 64 - 25927173 -TTC-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3354936 64 + 4669795 -TTC-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313018 65 + 135778131 TTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765683 64 - 2847728 -TTC-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881530 65 + 2368649 TTTT-----TTTGCAGTCAGTAATGTTTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611492 65 - 190850796 TTTT-----TTTGCAGTCAGTCATGATTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAGGAGTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099389 65 - 14256875 TTTT-----TTTGCAGTCAGTCATGACTTCAGAGCTGTTATCTGACCCTAACACTGAGCAGAAGAGTTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 994816 65 - 2196201 TTTT-----TTTGCCGTCAGTCATGATTTCATAGCTGTTATCTGACGCTTACACTGAACAGAAGAGTATC i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3389653 65 - 5030052 TTTT-----TTTGCAGTCAGTCATGATTTCATAGCTGTTATCTGACCCTTACACTGAGCAGAAGAGTTTC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86597124 65 - 129401213 TTTA-----TTTATAATCAGTAATAATTCTATAGCTATTATATGACCCTGACATAAGTAAGAAGAGCTTC i mm10.chr8 I 1160 I 8040 s canFam3.chr16 16950767 68 - 59632846 TTTTCACAATTAGTAATTAGTAATGCTTCCATAGTTGTCAACTGACACTTAAACAGAGCAGAAGAGTT-- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1443808 45 - 2520184 TTTC-----TTTACAATCAGCAATGCTTTTATAGCTGTTGCCTGAGCTTC-------------------- i dasNov3.JH570353 I 1 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17507989 187 - 93316391 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=279001.000000 s hg38.chr4_KI270789v1_alt 111752 24 + 205944 TGGGACAGTTTCTTTAAGTTTACA s panTro5.chr4 192899116 24 + 194502333 TGGGACAGTTTCCTTAAGTCTACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782791 24 + 195804263 TGGGACAGTTTCCTTAAGTCTACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820074 24 + 4876863 TGGGACAGTTTCCTTAAGTCTACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709172 24 + 115148730 TGGGACAGGTTCCTTAAGCCTACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991195 24 + 190429646 TGGGACAGGTTCCTTAAGCGTACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933970 24 + 189454096 TGGGACAGGTTCCTTAAGCGTACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325703 24 - 25927173 TGGGACAGGTTCCTTAAGCGTACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355000 24 + 4669795 TGGGACAGGTTCCTTAAGCGTACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313083 24 + 135778131 TGGGACAGGTTCCTTAAGTGTACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765747 24 - 2847728 TGGGACAGGTTCCTTAAGCGTACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881595 24 + 2368649 TGGGACAGGTTCCTTAAGCCTACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611557 24 - 190850796 TGGGATACGTTCCTTAAGCCTACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099454 24 - 14256875 TGGGATAGGTTCCTTAAGCCTACA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 994881 24 - 2196201 TGGGATAGGTTCCTTAAGCCTGCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3389718 24 - 5030052 TGGGATAGGTTCCTTAAGCCTACA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86605229 24 - 129401213 tgtAATGGAATTTTCAAGTCATCA i mm10.chr8 I 8040 C 0 s canFam3.chr16 16950835 24 - 59632846 AGAGACAGGATCCTTAAGCTTACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443853 24 - 2520184 TGGGACAGGATCCTCACGTCTGTA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17507989 187 - 93316391 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1341906.000000 s hg38.chr4_KI270789v1_alt 111776 120 + 205944 AATAATCAGCCATGTATAGGC-TTAAA-AAATAAATAAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATGAGGGAAGCTGGATCACAATCTTGAGAGGAAACA---AGAGGAA s panTro5.chr4 192899140 120 + 194502333 AATAATCAGTCATGTATAGGC-TTAAA-AAATAAATAAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATGAGGGAAGCTGGATCACAATCTTGAGAGGAAACA---AGAGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782815 120 + 195804263 AATAATCAGTCATGTATAGGC-TTAAA-AAATAAATAAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATGAGGGAAGCTGGATCACAATCTTGAGAGGAAACA---AGAGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820098 118 + 4876863 AATAATCAGTCATGTATAGGC-TTAAA-AAATAAATAAAGATTTCTCATTCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATGAGGGAAGCTGGATCACAATCTTGAGAGGAAAC-----GAGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709196 120 + 115148730 AATAATCAGTCATGTATAGGC-TCAAA-AAATAAATAAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATAAGGGAAGCTGGATCACAATCTTGAGAGGAAACA---ACAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991219 118 + 190429646 AATAATCAGTAATGCATAGGC-TCAAA-AATTAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187933994 118 + 189454096 AATAATCAGTAATGCATAGGC-TCAAA-AATTAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325727 118 - 25927173 AATAATCAGTAATGCACAGGC-TCAAA-AATTAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355024 118 + 4669795 AATAATCAGTAATGTATAGGC-TCAAA-AAATAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313107 118 + 135778131 AATAATCAGTAGTGTATAGGC-TCAAA-AAATAGAT--AGATTTCTCATCCATATGAATGA----ATGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765771 118 - 2847728 AATAATCAGTAATGTATAGGC-TCAAA-AAATAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881619 118 + 2368649 AATAATCAGTAATGTATAGGC-TCAAA-AAATAAAT--AGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAGGTAAATTAGATGAGGGAAACTGGATCATAATCTTGAGAGGAAGCA---AGAGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611581 117 - 190850796 GATAATCAGTAATGGGTGGGC-TC-AA-AATGAAATAAAGGTTTCTCATTCATATGAATGA----GTGGA--------------------------GCGAATACATTGGATGAGGGGAGCTGGACCGTGATCTTGAGAGGAAAC-----GAGGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099478 120 - 14256875 AATAATCAGTAATGGATAGGC-TCAAA-AATGAAATAAACATTTCTCATGCATATGAATGA----GGGGA--------------------------GCAAATAAATTAGATGAGGGAAGCTGGATTGTTATCTTGAGAGGAAACA---AGAGAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 994905 120 - 2196201 AATAACCAGTAACGGATAGGC-TCAAA-AATGAAATGAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATTAGATGAGGGAGGCTGGATCGTAATCTTGAGAGGAAACA---AGAGGAA i cebCap1.NW_016107886v1 C 0 I 177 s aotNan1.NW_018492112v1 3389742 118 - 5030052 AATAGTCAGTAACGGATAGGC-TCAAA-AATGAAATAAAGATTTCTCATCCATATGAATGA----GTGGA--------------------------GCAAATAAATCAGATGAGGGAAGCTGGATCGTAATCTTGAGAGGAAAC-----GAGGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17508176 118 - 93316391 AATAATCAGTAATGCATAGGC-TCAGA-AAATTAATAGTGATTTCTCATC--TATGAATGA----GAGGA--------------------------GGGAATAAGTCAGATATGGGAAGCCGGATCATAGTCTTGAGAGGAAACA---AGGGGAA i micMur3.chr14 I 187 I 505 s mm10.chr8 86605253 148 - 129401213 ACTAATTAGAAATGTTTTCTCTTCAAA-AATCTAACAGTAATTTCTTGTCTCTATTAATAAATTTGTGAAATTATCTACTATATGTATGTATGTATGTATATGAATATGATTA--GAAACTGTTT----ATTTTAAAAAGCATCCTTTGTATGAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16950859 115 - 59632846 AATAATTGGGAAAATATAGAC-TCAAAGAAATTAATGAAGATTTCTCATCTTTTTGTATAA-----TGGA-----------------------------AATAAATCAGATAAGGGAAACTGGATCATAATC-TGAGAGGATAC----AAAGGAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443877 100 - 2520184 AATAACCAGGGATGTTTATGC-TCATG-G---------GGATTTCTCATCCGCATGAATGA------GGA-----------------------------------TCAGATAAGGGAACCTGTGCCAAAACCTTGAGAGGGAACA---AGGGGAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=8281.000000 s hg38.chr4_KI270789v1_alt 111896 1 + 205944 A s panTro5.chr4 192899260 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782935 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820216 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709316 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991337 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934112 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325845 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355142 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313225 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765889 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881737 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86605401 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16950974 1 - 59632846 A i canFam3.chr16 C 0 C 0 e calJac3.chr3 189611698 0 - 190850796 C e cebCap1.NW_016107886v1 995025 177 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1443977 0 - 2520184 C e aotNan1.NW_018492112v1 3389860 0 - 5030052 C e saiBol1.JH378165 13099598 0 - 14256875 C e otoGar3.GL873580 11231772 24 - 11315646 I a score=1179840.000000 s hg38.chr4_KI270789v1_alt 111897 144 + 205944 ATTCAGAAAACATTTCACCTATACCTGGTTCTGTTAATACCTTGCCACTACCATATTATGGATGCAGGCTGAATACATGTTTTCAGAGGTTAGCACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------------------------ATATATATAAGGACA s panTro5.chr4 192899261 144 + 194502333 ATTCAGAAGACATTTCACCTACACCTAGTTGTGTTAATACCTTGCCACTACCATATTATGGATGCAGGCTGAGTACACGTTTTCAGAGGTTAGCACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------------------------ATATATATAAGGACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192782936 144 + 195804263 ATTCAGAAGACATTTCACCTACACCTAGTTGTGTTAATACCTTGCCACTACCATATTATGGATGCAGGCTGAGTACACGTTTTCAGAGGTTAGCACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------------------------ATATATATAAGGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820217 144 + 4876863 ATTCAGAAAACATTTCACCTATACCTAGTTGTGTTAACACCTTGCCACTGCCATATTATGGATGCAGGCTGAGTACACGTTTTCAGAGGTTAGCACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------------------------ATATATATAAGGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709317 144 + 115148730 ATTCAGAAAACATTTCACCTATACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGGATGCAGGCTGAATACACATTTTCAGAGGTTAGCACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------------------------ATATATATAAGGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991338 160 + 190429646 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG----------atatatatatatatatatatataAAAGGACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934113 160 + 189454096 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATTTTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG----------atatatatatatatatatatataAAAGGACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24325846 162 - 25927173 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG--------atatatatatatatatatatatatatatGGACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355143 170 + 4669795 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTtatatatatatatataaatatatatatatatataAAAGGACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313226 152 + 135778131 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTG------------------ATATATATATATATAAAAGGACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2765890 152 - 2847728 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAAAGGTTAGTACTGCAGCCAAGCAAGCAAGCATACTGTTAATCTC------------------atatatatatatatatatGGACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881738 162 + 2368649 ATTCAGAAAACATTTCACCTACACCTAGTTCTGTTAATACCTTGCCATTACCATATTATGTATGCAGACTGAGTACACATTTTCAGAGGTTAGTACTGCAGCCAAGCAAGCAAGCGTACTGTTAATCTG--------atatatatatatatatatatatataAAAGGACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611698 140 - 190850796 CTTGGGAAAGCATTTCACCTAAACCGAGTCCTGTTAGTACCTTGCCATTCCCACCTCGTATGTGCCCGCTGAGCACACGTTTTCAGGGTCTAGCCCTGCAGCCGGGCAAGCG----CACTGTTAGTCTG--------------------------ATGTGTACGAGGACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099598 138 - 14256875 ACTGGGAAAACATTTCACCTGTACCGAGTTCTGTGAGTACCTTGCCATTCCCA--TCGTGTGTGCAGGCCGAGCACACGTTTTTGGAGCTGAGCACTGCAGCGGAGCAAGCA----TACTGCCAGTCTG--------------------------ATGTGCACAAGGACA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3389860 140 - 5030052 ATTGGAAAAACATTTCACCTATCCCGAGTTCTGTTAATACCTTGCCATTCCCATCTTATGTGTGCAGGCTGAGCACACGTTTTCAGAGTTTAGCACCGCAGCCGAGCAAGCA----TACTGTTAATCTG--------------------------ATGTATACAAGGACA i aotNan1.NW_018492112v1 C 0 I 26 s mm10.chr8 86605402 129 - 129401213 ATTTAG------TCTCAAATGAAAATGTTTTTATTAA------GAAAGTAATGTATTATGCATGCAGGCCAAGAAAAA---TTTGCAGTTTCACACTGTAATGAAATCAGAG----TGTAGTTAGTCTG----------------------ATATATATACACAGGAACA i mm10.chr8 C 0 C 0 s canFam3.chr16 16950975 133 - 59632846 GTTTGGGAAA-ATAAAATCAATATCCAGTTCTAGTAATACCATACTATT------TTATGtatgtaggctaagtgta--tttgcagaatataatattgtagtcatataaatg----tattgttaacctg------------------------atatacgtgtaaagaca i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1443977 113 - 2520184 -----------ATTTAATCTATCTCTCGTTCGAGGAA-----TGCCATTTTC----------------CTGAGCACCCATTTGCAAAGTCCACTATTGCAGCTG-----GTAAGTGTATTGTTACCAGG--------------------ATGCATCCATCCACAGAGACG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 995025 177 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=171999.000000 s hg38.chr4_KI270789v1_alt 112041 26 + 205944 CACATAAC--TTACAATATAGTAAAGCA s panTro5.chr4 192899405 26 + 194502333 CACATAAC--TTACAATATGGTAAAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783080 26 + 195804263 CACATAAC--TTACAATATGGTAAAGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820361 26 + 4876863 CACATAAC--TTACAATATGGTAAAGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709461 26 + 115148730 CACATAAC--TTACAATATGATAAAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991498 26 + 190429646 CACATAAC--TTACAATATGATAAAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934273 26 + 189454096 CACATAAC--TTACAATATGATAAAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326008 26 - 25927173 CACATAAC--TTACAATATGATAAAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355313 26 + 4669795 CACATAAC--TTACAATATGATAAAGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313378 26 + 135778131 CACATAAC--TTACAATATGATAAAGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766042 25 - 2847728 CACATAAC--TTACAATAT-ATAAAGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881900 26 + 2368649 CACATAAC--TTACAATATGATAAAGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611838 26 - 190850796 -GCGAGACGGTCACAGTGCGATGGAGC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099736 26 - 14256875 -GCCTGACTGCTACAGTGCCACAGAGC- i saiBol1.JH378165 C 0 C 0 s mm10.chr8 86605531 28 - 129401213 CACATGACTATTAAAATACGGTAGATTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16951108 28 - 59632846 catgtaactgttttaacatgacagagta i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444090 26 - 2520184 --CATACCTGTTACAAGGCAGAGGAACA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 995025 177 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e aotNan1.NW_018492112v1 3390000 26 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=154315.000000 s hg38.chr4_KI270789v1_alt 112067 18 + 205944 AATAGGCTTGAATGGCAT s panTro5.chr4 192899431 18 + 194502333 AATAGGCTTGAATGGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783106 18 + 195804263 AATAGGCTTGAATGGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820387 18 + 4876863 AATAGGCTTGAATGGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709487 18 + 115148730 AATAGGCATGAATGGCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991524 18 + 190429646 AATAGGCTTGAATGGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934299 18 + 189454096 AATAGGCTCGAATGGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326034 18 - 25927173 AATAGGCTTGAATGGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355339 18 + 4669795 AATAGGCTTGAATGGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313404 18 + 135778131 AATAGGCTTGAATGGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766067 18 - 2847728 AATAGGCTTGAATGGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881926 18 + 2368649 AATAGGTTTGAATGGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611864 18 - 190850796 AAGAGGCGTGGATGGCGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099762 18 - 14256875 AATAGGCTTGAAGGGCGC i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3390026 18 - 5030052 GATAGGCTTGAATGGCGC i aotNan1.NW_018492112v1 I 26 C 0 s mm10.chr8 86605559 18 - 129401213 TGCAGGTCTCACCAGAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16951136 18 - 59632846 gataggcatcaacagtat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444116 12 - 2520184 ----GGCCTGCGTGAA-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 995025 177 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=48803.000000 s hg38.chr4_KI270789v1_alt 112085 4 + 205944 TGCA s panTro5.chr4 192899449 4 + 194502333 TGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783124 4 + 195804263 TGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820405 4 + 4876863 TGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709505 4 + 115148730 TGCA i nomLeu3.chr7b C 0 M 100 s rheMac8.chr5 188991542 4 + 190429646 TGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934317 4 + 189454096 TGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326052 4 - 25927173 TGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355357 4 + 4669795 TGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313422 4 + 135778131 TGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766085 4 - 2847728 TGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881944 4 + 2368649 TGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611882 4 - 190850796 CGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099780 4 - 14256875 TGCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995202 4 - 2196201 TGCA i cebCap1.NW_016107886v1 I 177 C 0 s aotNan1.NW_018492112v1 3390044 4 - 5030052 TGCA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86605577 2 - 129401213 --CA i mm10.chr8 C 0 I 2 s canFam3.chr16 16951154 4 - 59632846 ttca i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444128 0 - 2520184 C e otoGar3.GL873580 11231772 24 - 11315646 I a score=487235.000000 s hg38.chr4_KI270789v1_alt 112089 58 + 205944 GTTCACAC-------ACACTGCCATGGTGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG s panTro5.chr4 192899453 58 + 194502333 GTTCACAC-------ACTTTGCCATGGTGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783128 58 + 195804263 GTTCACAC-------ACTTTGCCATGGTGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820409 58 + 4876863 GTTCACAC-------ACTCTGCCATGGTGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188991546 60 + 190429646 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934321 60 + 189454096 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326056 60 - 25927173 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355361 60 + 4669795 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313426 60 + 135778131 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766089 60 - 2847728 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAACTTCTGAAACATAATTTTAGTTTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 881948 60 + 2368649 GTTCACACA-----GACTCTGCCATTATGTTGCTATTCAGCTTCTGAAACATAATTTTAGTTTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611886 59 - 190850796 GGTCACACA------GACCTGCCAGCGTGCTGCCATCCAGCTTCTGACACGTCATTTCAGTTTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099784 56 - 14256875 GTTCAGAC---------TCTGCCAGGACGTTGCTGTTCCACTTCTGAAACGTCATTCTAGTCTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995206 58 - 2196201 GTTCACAG-------GCTCTGCCAGGATGTTGCGATTCAACCTCTGAAACATAATTCTAGTTTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3390048 60 - 5030052 GTTCACACA-----GACTCTGCCAGTATGTTGCTATTCAGCTTCTGAAACGTAATTTTAGTTTTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86605581 59 - 129401213 GTTCATATA-----GACTCTGCCAAT-TATTGCTATTTAACATCCGAACTATAATTTTCAACTTG i mm10.chr8 I 2 C 0 s canFam3.chr16 16951158 56 - 59632846 gttcacata-----gatgctgccattatgttactat-caacagccaaaccaTA---CCAGTTTTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444128 49 - 2520184 ---CACATGCCCCTGGATGCGGCATTTCATTGCATTTCGACAACCAAACCAT------------- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e nomLeu3.chr7b 112709509 100 + 115148730 M e otoGar3.GL873580 11231772 24 - 11315646 I a score=77927.000000 s hg38.chr4_KI270789v1_alt 112147 11 + 205944 TCCTCTTGCCT s panTro5.chr4 192899511 11 + 194502333 TCCTCTTGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783186 11 + 195804263 TCCTCTTGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820467 11 + 4876863 TCCTCTTGCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709609 10 + 115148730 TCCTC-TGCCT i nomLeu3.chr7b M 100 C 0 s rheMac8.chr5 188991606 11 + 190429646 TCCTCTTGCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934381 11 + 189454096 TCCTCTTGCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326116 11 - 25927173 TCCTCTTGCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355421 11 + 4669795 TCCTCTTGCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313486 11 + 135778131 TCCTCTTGCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766149 11 - 2847728 TCCTCTTGCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882008 11 + 2368649 TCCTCTTGCCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611945 6 - 190850796 TCCTCC----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099840 6 - 14256875 TCCTCC----- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995264 11 - 2196201 TCCTCTTGCCT i cebCap1.NW_016107886v1 C 0 I 211 s aotNan1.NW_018492112v1 3390108 11 - 5030052 CCCTCTGGCCT i aotNan1.NW_018492112v1 C 0 I 198 s mm10.chr8 86605640 4 - 129401213 ------TGTT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16951214 4 - 59632846 TCCT------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444177 11 - 2520184 CCTTCTTGCCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=247422.000000 s hg38.chr4_KI270789v1_alt 112158 34 + 205944 CCCTTGCCTTgctatagtgatttagctttaaaaa s panTro5.chr4 192899522 34 + 194502333 CCCTTGCCTTgctatagtgatttagctttaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783197 34 + 195804263 CCCTTGCCTTgctatagtgatttagctttaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820478 34 + 4876863 CCCTTGCCTTgctatagtgatttagctttaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709619 33 + 115148730 CTC-TGCCTTgctatagtgatttagctttaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991617 34 + 190429646 CTCTTGCCTTGCTATAGTGATTTAGCTTTAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934392 34 + 189454096 CTCTTGCCTTGCTATAGTGATTTAGCTTTAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326127 34 - 25927173 CTCTTGCCTTgctatagtgatttagctttaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355432 34 + 4669795 CTCTTGCCTTgctatagtgatttagctttaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313497 34 + 135778131 CTCTTGCCTTgctatagtgatttagctttaaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766160 34 - 2847728 CTCTTGCCTTgctatagtgatttagctttaaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882019 34 + 2368649 CTCTTGCCTTGCTACAGTGATTTAGCTTTAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189611951 16 - 190850796 ---------TGCTGGAGTGACTTAG--------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099846 30 - 14256875 ----TGCCTTGCTAGGGCGACTTAGCTGTAACGG i saiBol1.JH378165 C 0 C 0 s mm10.chr8 86605644 31 - 129401213 ---TTGTTCACCTATAATGATTGTGTTTATAAAA i mm10.chr8 C 0 I 351 s canFam3.chr16 16951218 31 - 59632846 --CTTGCCTTGCTATAG-GACTGGGTTTTAAAAA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444188 0 - 2520184 C e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=88727.000000 s hg38.chr4_KI270789v1_alt 112192 10 + 205944 tgcaagcctg s panTro5.chr4 192899556 10 + 194502333 tgcaagcctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783231 10 + 195804263 tgcaagcctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820512 10 + 4876863 tgcaagcctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709652 9 + 115148730 tgcaag-ctg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991651 10 + 190429646 TGCAAGCCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934426 10 + 189454096 TGCAAGCCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326161 10 - 25927173 tgcaagcctg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355466 10 + 4669795 tgcaagcctg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313531 10 + 135778131 tgcaagcctg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766194 10 - 2847728 tgcaagcctg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882053 10 + 2368649 TGCAAGCCTG i colAng1.NW_012116221v1 C 0 I 7 s calJac3.chr3 189611967 9 - 190850796 -GTTAGCCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099876 10 - 14256875 TGCAGCCCTG i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16951249 10 - 59632846 TGCAAATCTG i canFam3.chr16 C 0 I 318 s dasNov3.JH570353 1444188 10 - 2520184 TGCAAATCTG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1069059.000000 s hg38.chr4_KI270789v1_alt 112202 161 + 205944 cacctgtcatttccctgctaagcat-ctctattg-gccc-ccatgtcctcaaggatgcagaccaagtccattccagaacagc-ttccatgctccagtcctacccacctcagtagccctatcactcttcttactttctgctccaaccacaatacaattctagtggt s panTro5.chr4 192899566 161 + 194502333 cacctgtcatttccctgctaagcat-ctctattg-gccc-ccatgtcctcgaggatgcagaccaagtccattccagaacagc-ttccatgctccagtcctacccaccgcagtagccctatcactcttcttactttctgctccaaccacaatacaattctagtggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783241 161 + 195804263 cccctgtcatttccctgctaagcat-ctctattg-gccc-ccatgtcctcgaggatgcagaccaagtccattccagaacagc-ttccatgctccagtcctacccaccgcagtagccctatcactcttcttactttctgctccaaccacaatacaattctagtggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820522 161 + 4876863 cacctgtcatttccctgctaagcct-ctctattg-gccc-ccatgtcctcgaggatgcagaccaagtccattccagaacagc-ttccatgctccagtcctacccaccgcagtagccctatcactcttcttactttctgctccaaccacaatacaattctagtggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709661 161 + 115148730 cacctgtcattt-cctgccaagcat-ctctatcg-gccc-ccatctccttgaggatacagaccaagtccattccagaacagctttccatgctccagtcctacccaccgcattagccctatcactcttcttattttctgctccaaccacaataaaattctattggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991661 162 + 190429646 CACCTCTAATTTCCCTGCTAAGCATCCTCTGTTG-GCCC-CTATCTCCTTGAGGATACAGACCAAGTCCATTCCAGAACAGC-TTCCGTGCTCCAGTCCTACCCACTGCATTAATCCTATCACTTTTCTTATTTTCTGCTCCAACCACAGTAAAATTCTATTGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934436 162 + 189454096 CACCTCTAATTTCCCTGCTAAGCATCCTCTGTTG-GCCC-CTATCTCCTTGAGGATACAGACCAAGTCCATTCCAGAACAGC-TTCCGTGCTCCAGTCCTACCCACTGCATTAATCCTATCACTCTTCTTATTTTCTGCTCCAACCACAGTAAAATTCTATTGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326171 162 - 25927173 cacctctaatttccctgctaagcatcctctgttg-gccc-ctatctccttgaggatacagaccaagtccattccagaacagc-ttccgtgctccagtcctacccactgcattaatcctatcactcttcttattttctgctccaatcacaGTAAAATTCTATTGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355476 162 + 4669795 cacctctaatttccctgctaagcatcctctgttg-gccc-ctatctccttgaggatacagaccaagtccattccagaacagc-ttccgtgctccagtcctacccactgcattaatcctatcactcttcttattttctgctccaaccacaGTAAAATTCTATTGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313541 161 + 135778131 cacctc-aatttccctgctaagcatcctctattg-gccc-ctatctccttgaggatacagaccaagtccattccagaacagc-ttccatgctccagtcctacccactgcattaatcctatcactcttcttcttttctgctccaaccataGTAAAATTCTATTGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766204 162 - 2847728 cacctctaatttccctgctaagcatcctctgttg-gccc-ctatctccttgaggatacagaccaagtccattccagaacagc-ttccatgctccagtcctacccactgcattaatcctatcactcttcttattttctgctccaaccacaGTAAAATTCTATTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882070 156 + 2368649 CACCTCTCATTTCCCTGCTAAGCATCCTCCATTG-GCCC-CTATCTCCTTGAGGATACAGACCACGTCCATTCCAGAACAGC-TTCCGTGCTCCAGTCCTACCCCC--CATTAGTCCTATCA----TCTTCTGTTCTGCTCCAACCGCAATAAAATTCTATTGGT i colAng1.NW_012116221v1 I 7 C 0 s calJac3.chr3 189611976 159 - 190850796 C-CCCGTCACTTCCCAGCCGCGCACCCTCTAGTG-GCCTCCCACCTCCTTGGGGACACAGGCCCAGTGTGTTCCCGAGCGGC-TTCTGTGCCC---GTCCACACGCCGCCTTGGTCCTCTCACTCTTCTTATTTTCTCCTCCAACCACAATAAAAATCTAATGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13099886 159 - 14256875 CTCCTGTCATTTCCCAGCTACGCGTCCTCTGGTG-GCCT-CCATCTCCTTGGGGATACAGGCCTGGTACATTCCGGAACGGC-TTCCATACCCCCGTCCCGCCTGCTGCCTTACTCCTCCTGCTCTTC---TTTTCTCCTCCAATCACAATAAAATTCTATTGGT i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1444198 132 - 2520184 ATCTTGCCAC--CCCTGCTAAGCACCCTGTAATGCATCC-CCATTTCCG-GAGGAAACAGGCCAAATCTGTTCTCGACTGGT-TGC----------------------CTCTGATTCTGTCCCTTCCC------TCTGCTGCAGCCCTAAGGAAATTCTGTTGGT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=66215.000000 s hg38.chr4_KI270789v1_alt 112363 11 + 205944 tgatcaaaatg- s panTro5.chr4 192899727 11 + 194502333 tgatcaaaatg- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783402 11 + 195804263 tgatcaaaatg- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820683 11 + 4876863 tgatcaaaatg- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709822 11 + 115148730 tgatcaaaatg- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991823 11 + 190429646 TGATCAACATG- i rheMac8.chr5 C 0 I 21 s macFas5.chr5 187934598 11 + 189454096 TGATCAACATG- i macFas5.chr5 C 0 I 21 s macNem1.NW_012013133v1 24326333 11 - 25927173 TGATCAACATG- i macNem1.NW_012013133v1 C 0 I 21 s cerAty1.NW_012001672v1 3355638 11 + 4669795 TGATCAACATG- i cerAty1.NW_012001672v1 C 0 I 21 s chlSab2.chr7 134313702 11 + 135778131 TGATCAACATG- i chlSab2.chr7 C 0 I 28 s manLeu1.NW_012102221v1 2766366 11 - 2847728 TGATCAACATG- i manLeu1.NW_012102221v1 C 0 I 21 s colAng1.NW_012116221v1 882226 11 + 2368649 TGATCAAAATG- i colAng1.NW_012116221v1 C 0 I 27 s saiBol1.JH378165 13100045 11 - 14256875 TGATCAAAATG- i saiBol1.JH378165 C 0 I 1 s dasNov3.JH570353 1444330 11 - 2520184 -TACCAGAACCG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=390.000000 s hg38.chr4_KI270789v1_alt 112374 2 + 205944 tt- s panTro5.chr4 192899738 2 + 194502333 tt- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783413 2 + 195804263 tt- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820694 2 + 4876863 tt- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709833 2 + 115148730 tt- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991855 2 + 190429646 TT- i rheMac8.chr5 I 21 C 0 s macFas5.chr5 187934630 2 + 189454096 TT- i macFas5.chr5 I 21 C 0 s macNem1.NW_012013133v1 24326365 2 - 25927173 TT- i macNem1.NW_012013133v1 I 21 C 0 s cerAty1.NW_012001672v1 3355670 2 + 4669795 TT- i cerAty1.NW_012001672v1 I 21 C 0 s chlSab2.chr7 134313741 2 + 135778131 tt- i chlSab2.chr7 I 28 C 0 s manLeu1.NW_012102221v1 2766398 2 - 2847728 TT- i manLeu1.NW_012102221v1 I 21 C 0 s saiBol1.JH378165 13100057 1 - 14256875 C-- i saiBol1.JH378165 I 1 C 0 s dasNov3.JH570353 1444341 2 - 2520184 -TC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e colAng1.NW_012116221v1 882237 27 + 2368649 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=10098.000000 s hg38.chr4_KI270789v1_alt 112376 3 + 205944 tct s panTro5.chr4 192899740 3 + 194502333 tct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783415 3 + 195804263 tct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820696 3 + 4876863 tct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709835 3 + 115148730 tct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991857 3 + 190429646 CCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934632 3 + 189454096 CCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326367 3 - 25927173 CCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355672 3 + 4669795 CCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313743 3 + 135778131 ccc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766400 3 - 2847728 CCC i manLeu1.NW_012102221v1 C 0 C 0 s dasNov3.JH570353 1444343 3 - 2520184 TCT i dasNov3.JH570353 C 0 I 63 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e saiBol1.JH378165 13100058 0 - 14256875 C e colAng1.NW_012116221v1 882237 27 + 2368649 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=39644.000000 s hg38.chr4_KI270789v1_alt 112379 20 + 205944 ttttcttttttttttttt-------ga s panTro5.chr4 192899743 23 + 194502333 ttctcttttttttttttt----tttga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783418 20 + 195804263 ttctcttttttttttttt-------ga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820699 27 + 4876863 ttttctttcttttttttttttttttga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709838 12 + 115148730 t--------ttttttttt-------ga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991860 18 + 190429646 Ctttccttttctttcctt--------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934635 18 + 189454096 Ctttccttttctttcctt--------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326370 18 - 25927173 Ctttccttttctttcctt--------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355675 18 + 4669795 Ctttccttttctttcctt--------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313746 18 + 135778131 ctttccttttctttcctt--------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766403 18 - 2847728 Ctttccttttctttcctt--------- i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e saiBol1.JH378165 13100058 0 - 14256875 C e colAng1.NW_012116221v1 882237 27 + 2368649 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1041995.000000 s hg38.chr4_KI270789v1_alt 112399 193 + 205944 gagggagttttgctcttgttgcccaggctggagtgcaatggcgccatctcggctcactgcaacctctgcctcctaggtacaagggattctcctgtctcagcctcccaagtagctcagattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg s panTro5.chr4 192899766 193 + 194502333 gagggagttttgctcttgttgcccaggctggagtgcaatggcgccatctcagctcactgcaacctctgcctgctaggtacaagggattctcctgtctcagcctcccaagtagctcagattacaggcatgcaccaccatgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783438 192 + 195804263 gagggagttttgctcttgttgcccaggctggagtgcaatggcgccatctcagctcactgcaacctctgcctgctaggtacaagggattctcctgtctcagcctcccaagtagctcagattacaggcatgcaccaccatgcccagctaa-ttttttgtatttagtggagatggggtttcaccatgttagtcagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820726 193 + 4876863 gagggagttttgctcttgttgcccaggctggagtgcaatggcgccatctcggctcactgcaacctctgcctcctaggtacaagggattctcctgtctcagcctcccaagtagctcggattacaggcatgcaccaccacacccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112709850 193 + 115148730 gagggagttttgctcttgttgcccatgctggagtgcaatggcgccatctcggctcactgcaatctctgccttccaggtacaagggattctcctgtctcagcctcccaagtagctcagattacaggcatgcgccaccacgcccagctaatttttttgtatttagtggagatggggtttccccatgttagtcagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188991878 179 + 190429646 gagggagttttgctcttgttgcccaggctggagtgcaatggcaccatctccgctcactgcaacctccgcctcccagttac--------------tctcagcctcccaagtagcttggattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934653 179 + 189454096 gagggagttttgctcttgttgcccaggctggagtgcaatggcaccatctccgctcactgcaacctccgcctcccagttac--------------tctcagcctcccaagtagctcggattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326388 179 - 25927173 gagggagttttgctcttgttgcccaggctggagtgcaatggcaccatctccgctcactgcaacctccgcctcccagttac--------------tctcagcctcccaagtagctcggattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355693 179 + 4669795 gagggagttttgctcttgttgcccaggctggagtgcaatggcaccatctccgctcactgcaacctccgcctcccagttac--------------tgtcagcctcccaagtagctcggattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313764 179 + 135778131 gagggagttttgctcttgttgcccaggctggagtgcaatggcgccatctctgctcactgcaacctccgcctcccagttac--------------tcttagcctcccaagtagctcggtttacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766421 179 - 2847728 gagggagttttgctcttgttgcccaggctggagtgcaatggcaccatctcagctcactgcaacctccgcctcccagttac--------------tctcagcctcccaagtagctcggattacaggcatgcaccaccacgcccagctaatttttttgtatttagtggagatggggtttcaccatgttagtcagg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882264 179 + 2368649 gagggagttttgctcttgtggcccaggctggagtgcaatggcaccatctcagctcactgcaacctccgcctcccaggtac--------------tctcagcctcccaagtagctcggattctaggcatgcaccaccatgcccagctaatttgtttgtatttagtggagatggggtttcaccatgttagtcagg i colAng1.NW_012116221v1 I 27 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e canFam3.chr16 16951259 318 - 59632846 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e saiBol1.JH378165 13100058 0 - 14256875 C e otoGar3.GL873580 11231772 24 - 11315646 I a score=485935.000000 s hg38.chr4_KI270789v1_alt 112592 88 + 205944 ctggttacgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgctgggattataggcatgtgcca----------------------ccttgcccggcc s panTro5.chr4 192899959 88 + 194502333 ctggttacgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgctgggattataggcatgtgcca----------------------ccttgcccggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783630 88 + 195804263 ctggttacgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgctgggattataggcatgtgcca----------------------ccttgcccggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3820919 88 + 4876863 ctggttacgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgctgggattataggcatgtgcca----------------------ccttgcccggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710043 88 + 115148730 ctggttgtgaactcctgaccttaggtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgcgcca----------------------ccttgcccagcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992057 88 + 190429646 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaaatgctgggattacatgcgtgcgcca----------------------ccttgcccggcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934832 88 + 189454096 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaagtgctgggattacatgcgtgcgcca----------------------ccttgcccggcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326567 88 - 25927173 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaagtgctgggattacatgcgtgcgcca----------------------ccttgcccgacc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355872 88 + 4669795 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaagtgctgggattacatgtgtgcgcca----------------------ccttgcccggcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134313943 110 + 135778131 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaagggctgggattacacgcgtgcgccactgGGATTACACGCGTGCGCCGCCTTGCCCGGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766600 88 - 2847728 ctgtttgtgaactcctgacctcaggtgatccacccgccttagcctcccaaagtgctgggattacacgcgtgcgcca----------------------ccttgcccggcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882443 88 + 2368649 ctgtttgtgaactcctgacctcaggtgatccacccgcctcagcctcccaaagtgctgggattacacgcatgcacca----------------------ccttgcccggcc i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16951577 55 - 59632846 CTGATTATTGGCTCCAGACAGAAGG------------------------AAATTCTAGGCACAC-------TGCCC----------------------CTTTTCTCAG-- i canFam3.chr16 I 318 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e mm10.chr8 86605675 351 - 129401213 I e aotNan1.NW_018492112v1 3390119 198 - 5030052 I e saiBol1.JH378165 13100058 0 - 14256875 C e otoGar3.GL873580 11231772 24 - 11315646 I a score=62412.000000 s hg38.chr4_KI270789v1_alt 112680 10 + 205944 tcaaaatgtg s panTro5.chr4 192900047 10 + 194502333 tcaaaatgtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783718 10 + 195804263 tcaaaatgtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821007 10 + 4876863 tcaaagtgtc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710131 10 + 115148730 tcaaaatgtc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992145 10 + 190429646 TCAAAATGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934920 10 + 189454096 TCAAAATGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326655 10 - 25927173 TCAAAATGTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355960 10 + 4669795 TCAAAATGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314053 10 + 135778131 TCAAAATGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766688 10 - 2847728 TCAAAATGTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882531 10 + 2368649 TCAAAATGTC i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3390317 10 - 5030052 TCAAAATGGC i aotNan1.NW_018492112v1 I 198 C 0 e calJac3.chr3 189612135 0 - 190850796 C e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e canFam3.chr16 16951632 0 - 59632846 C e mm10.chr8 86605675 351 - 129401213 I e saiBol1.JH378165 13100058 0 - 14256875 C e otoGar3.GL873580 11231772 24 - 11315646 I a score=20055.000000 s hg38.chr4_KI270789v1_alt 112690 2 + 205944 tc s panTro5.chr4 192900057 2 + 194502333 tc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783728 2 + 195804263 tc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821017 2 + 4876863 tc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710141 2 + 115148730 tc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992155 2 + 190429646 TC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934930 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326665 2 - 25927173 TC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355970 2 + 4669795 TC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314063 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766698 2 - 2847728 TC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882541 2 + 2368649 TC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612135 2 - 190850796 TC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13100058 2 - 14256875 TC i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3390327 2 - 5030052 TC i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 995275 211 - 2196201 I e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e canFam3.chr16 16951632 0 - 59632846 C e mm10.chr8 86605675 351 - 129401213 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=263543.000000 s hg38.chr4_KI270789v1_alt 112692 29 + 205944 ttgatacaaagatttcccctacactgtaa s panTro5.chr4 192900059 29 + 194502333 ttgatacaaagatttcccctacactgtaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783730 29 + 195804263 ttgatacaaagatttcccctacactgtaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821019 29 + 4876863 ttgatacaaagatttcccctacactgtaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710143 29 + 115148730 ttgatacaaagatttcccctacactgtaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992157 29 + 190429646 TTGATACAAAGATTTCCTCTACACTGTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934932 29 + 189454096 TTGATACAAAGATTTCCTCTACACTGTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326667 29 - 25927173 TTGATACAAAGAtttcctctacactgtaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3355972 29 + 4669795 TTGATACAAAGAtttcctctacactgtaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314065 29 + 135778131 TTGATACAAAGATTTCCTCTACACGGTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766700 29 - 2847728 TTGATACAAAGAtttcctctacactgtaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882543 29 + 2368649 TTGATACAAAGATTTCCTCTACACTGTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612137 29 - 190850796 TTGATGCAACGAGTTCCCATTCACGGTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13100060 29 - 14256875 TTGATGCAAAGACGTCCCATTCACCGTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995486 29 - 2196201 TTGATGCAAAGATTTCCCATTCATCGTAA i cebCap1.NW_016107886v1 I 211 C 0 s aotNan1.NW_018492112v1 3390329 29 - 5030052 TTGATGCAAAGATTTCCCATTCACTGCAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16951632 17 - 59632846 ---------GGATTTAGCAT---CTGTAA i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e mm10.chr8 86605675 351 - 129401213 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1168066.000000 s hg38.chr4_KI270789v1_alt 112721 121 + 205944 --tgttcctct-----aatcctccctctcata------acagctacttatccctcgggtttcatcttaaacttt-acatttagggagaaccttcccccaca----------------------------gagcagacatatc----aggtcc-cctgt-gtattctcta s panTro5.chr4 192900088 121 + 194502333 --tgttcctct-----aatcctccctctcata------acagctacttatccctcgggtttcatcttaaacttt-acatttagggagaaccttcccccaca----------------------------gagcagacatatc----aggtcc-cctgt-gtattctcta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783759 121 + 195804263 --tgttcctct-----aatcctccctctcata------acagctacttatccctcgggtttcatcttaaacttt-acatttagggagaaccttcccccaca----------------------------gagcagacatatc----aggtcc-cctgt-gtattctcta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821048 121 + 4876863 --tgttcctct-----aatcctcccgctcata------acagctacttatccctcgggtttcatcttaaacttt-acatttagggagaaccttccccgaca----------------------------gagcagacatatc----aggtcc-cctgt-gtattttcta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710172 121 + 115148730 --tgttcctct-----aatcctccctctcata------acagctacttatccctcaggtttcatcttaaacttt-ccatttagggagaaccttccctcaca----------------------------gagcagacatatc----aggtcc-cctGT-ATATTCTCTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992186 121 + 190429646 --TGTTCCTCT-----AATCCTCCCTCTCATA------ACAGCTACTTGTCCATCGGGTTTCATCTTAGACATT-ACATTTAGGGAGAATCTTCCCTCACA----------------------------GAGCAGACACATC----AGGTCC-CCTGT-GTATTCTCTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187934961 121 + 189454096 --TGTTCCTCT-----AATCCTCCCTCTCATA------ACAGCTACTTGTCCATCGGGTTTCATCTTAGACATT-ACATTTAGGGAGAATCTTCCCTCACA----------------------------GAGCAGACACATC----AGGTCC-CCTGT-GTATTCTCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326696 120 - 25927173 --tgttcctct-----aatcctccctctcata------acagctacttgtccatcgggtttcatcttagacatt-acatttagggagaatcttccctcaca----------------------------gagcagacacatc----aggtcc-cc-gt-gtattctcta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356001 121 + 4669795 --tgttcctct-----aatcctccctctcata------acagctacttgtccatcggatttcatcttagacatt-acatttagggagaatcttccctcaca----------------------------gagcagacacatc----aggtcc-cctgt-gtattctcta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314094 121 + 135778131 --TGTTCCTCT-----CATCCTCCCTCTCATA------ACAGCTACTTGTCCATCGGGTTTCATCTTAGACATT-ACATTTAGGGAGAATCTTCCCTCACA----------------------------GAGCAGACACATC----AGGTCC-CCTGT-GCATTCTCTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766729 125 - 2847728 --tgttcctct-----aatcctccctctcaca------acagctacttgtccatcgggtttcatcttagacatt-acatttagggagaatcttccctcaca----------------------------gggcagacacatcaggtaggtcc-cctgt-gtattctcta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882572 121 + 2368649 --CGTTCCTCT-----GATCCTCCCTCTCATA------ACAGCTACTTATCCGTCGGGTTTCATCGTAAACATT-ACATTTAGGGAGAATCTTCCCTCACA----------------------------GAGCAGACACATC----AGGTCC-TCTGT-GTACTCTCTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612166 135 - 190850796 --TGCTCCTCT-----AATCCTCCCTCCCGTG------ACA---------------GGTTTCATCTTAAACATG-ACACTTTGGCAGAAGCTACCCTCACGAGCAGACACCAGAAGAAGCTACCCTCACGAGCAGACACACC----AGGTCCTCCTGT-GTATTCTCTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13100089 122 - 14256875 --TGCTCCTCT-----AAGCCTCCCTCCCGTG------ACAGCTACTTATCCCTCGGGCTTCATCTTAAACATG-ACACTTTGGGAGAAGCTTCCCTCACA----------------------------GAGCAGACACGCC----AGTTCCTCCTGT-GTATTCTCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995515 122 - 2196201 --TGCTCCTCT-----AATCCTCCCTCCCGTG------ACAGCCGCTTATCCCTCGGGTTTCATCTTAAACATG-ACACTTTGGGAGAAGCTTCCCTCACA----------------------------GAGCAGACACACC----AGGTCCTCCTGT-GTATTCTCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3390358 120 - 5030052 --TGCTCCTCT-----AATCCTCCCTCCCGTG------ACAGCTACTTATCCCTCGGGTTTCATCTTAAACATG-ACAC--TGGGAGAAGCTTCCCTCACA----------------------------GAGCAGACACACC----AGGTCCTCCTGT-GTATTCTCTA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86606026 134 - 129401213 --TATCCCTCTTCAACAACCTTTCTTTTCATGGATCTCACAACTATTTAGTCCCCACGTTTCATCTTAAACATCAACATTTTAAAAGAACCTCCTGTCATG----------------------------GAGTAGAGTCATC----AGATCCTCCTTT-GTATGCTAAC i mm10.chr8 I 351 C 0 s canFam3.chr16 16951649 112 - 59632846 TTCCCTCATAT-----AACCCTCCCTTTCATGAAGCTGACAGCTATCAGTCCCTCAAGGTTTACCTTAAACATG-GCTTTTT-----------------CA----------------------------GAGTTGAGTAGTT----CAGTCTTTTTGTAATGTTCTC-- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3947210 922 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=2037548.000000 s hg38.chr4_KI270789v1_alt 112842 194 + 205944 atggcagtcttgtatttctttgtaacaaaaattgaatttatttaacatatgacttTCCTACCATTAAGTCTTTTACTTGAACGAGGgcaggtattcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTCACAGACTCAGAAGCAGTTGGAGATACTAGTAT s panTro5.chr4 192900209 194 + 194502333 atggcagtcttgtatttctttgtaacaaaaattgaatttatttaacatatgacttTCCTACCATTAAGTCTTTTACTTGAACGAGGgcaggtattcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTCACAGACTCAGAAGCAGTTGGAGATACTAGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192783880 194 + 195804263 atggcagtcttgtatttctttgtaacaaaaattgaatttatttaacatatgacttTCCTACCATTAAGTCTTTTACTTGAACGAGGgcaggtattcaataaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTCACAGACTCAGAAGCAGTTGGAGATACTAGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821169 194 + 4876863 atggcagtcttgtatttctttgtaacaAAAATTGAATTTATTTAATATATGACTTTCCTACCATTAAGTCTTTTACTTGAACGAGGgcaggtattcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATAATTTATTATCATTGG----------TCTAGTCACAGACTCAGAAGCAGTTGGAGATACTAGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710293 194 + 115148730 ATGGCAGTCTTGTATTTCTTTATAACAAAAATTGAATTTATTTAATATATGACTTTCCTACCATTAAGCCTTTTACTTGAATGAGGgcaggtattcagtaaatgtttcttgaataaataaatGCATGGTAGTTGTTTATCATTTATTATCATTGG----------TATAGTCACAGACTCAGAAGCAGTTGGCGATACTAGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992307 194 + 190429646 ATGGCAGTCTTGTATTTCTTTGTAACAAAAATTGAATTTATTTAATATATGACTTTCCTACCACTAAGCTTTTTACTTGAATGAGGgcaggtgttcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935082 194 + 189454096 ATGGCAGTCTTGTATTTCTTTGTAACAAAAATTGAATTTATTTAATATATGACTTTCCTACCACTAAGCTTTTTACTTGAATGAGGgcaggtgttcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24326816 194 - 25927173 atggcagtcttgtatttctttgtaacaaaaattgaatttatttaatatatgactttcctaccactaagctttttacttgaatgagggcaggtgttcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356122 194 + 4669795 atggcagtcttgtatttctttgtaacaaaaattgaatttatttaatatatgactttcctaccactaagccttttacttgaatgagggcaggtgttcagtaaatgtttcttgaataaataaatGCATGCTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314215 193 + 135778131 ATGGCAGTCTTGTATTTCTTTGTAAC-AAAATCGAATTTATTTAATATATGACTTTCCTATCACTGAGCCTTTTACTTGAATGAGGgcaagtgttcaggaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTGTTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2766854 194 - 2847728 atggcagtcttgtatttctttgtaacaAAAATCGAATTTATTTAATATATGACTTTCCTACCACTAAGCCTTTTACTTGAATGAGGgcaggtgttcagtaaatgtttcttgaataaataaatGCATGGTAGTTCTTTATCATTTGTTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882693 190 + 2368649 ATGGCAGTCTTGTATTTCTTTGTAACAAAAATTGAATTTATTTAATATATGACTTTCCTACCACTAAGCCTTTTACTTGAATGAGGgcaggtattcagtaaatgtttcttg----aataaatgcatGGTAGTTCTTTATCATTTATTATCATTGG----------TCTAGTTACAGACTCTGAAGCAGTTGGAGATACCAGTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612301 178 - 190850796 ACGACAGTCTTGCATTTCTGTGTAACAAAAACGGAATTTATTTAATATGTGACTTTCCCACCATTGAGCCTTTTACTTGAATGAGGTCAG-------------GTTTCTTGAATAAGCAAATGCATGGTAGTTCTTTATCAT---GTATCATTGG----------TCTAGTCACAGACTCAGAACAAGTTGGAGATACTAGTAT i calJac3.chr3 C 0 I 302 s saiBol1.JH378165 13100211 178 - 14256875 ACGACAGTCTCGTATTTCTTTGTAACAAAAATGGAATTTATTTAATATATGACTTTCCCACCATTAAGCCTTTTACTTGAATGAGGGCAG-------------GTTTCTTGAAGAAGTAAATGCATGGTAGTTCTTTATCAT---TTATCATTGG----------CTTAGTCACAGACTCAGATCAAGTTGGAGATATTAGTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995637 177 - 2196201 ATGACAGTCTCATATTTCTTTGTAACCAAAATGGAATTTACTTAATATATGTCTTTGCCACCA-TAAGCCTTTTCCTTGAATGAGGGCAG-------------GCTTCTTGAATAAGTGAATGCATGGTAGATCTGTATCAT---TCATCATTGG----------TCTAGTCACAGACTGAGAACAAGCTGGAGATGCTAGTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3390478 143 - 5030052 ATA-----------------------------------TATTTAATATATGACTTTCCCACCATTAAGCCTTTTACTTGAGTGAGGGCAG-------------GTTTCTTGAATAAGTAAATGCATGGTAGTTCTTTATCAT---TTATCATTGG----------TCTAGTCACAGACTCAGAACAAGTTGGAGATACTAGTAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3948132 190 + 3993831 atggcagtcttttatttctttgtaacacagattatatttatttaatagatggctttcctaccttcaagtctttgaattgaatgagggaaggTATTCAGTAAGTGTTCTTTTGATACATA----CATGGTAGATCTATACCGTGTATAATTATTGG----------TCTAGTCACAATCGGAGAACCAGTTGGAGACACTAGCAC i proCoq1.NW_012145301v1 I 922 C 0 s mm10.chr8 86606160 190 - 129401213 ATC-CAGACTTTTACTTCCAGGTGACAGAAATTATATTTATTCACTATA--ACTTTCCTACC--TGAGATACTGTGTTGCATGATGGAAAGTATCC-------CTGTCTT--ACAAATAGATTCATGAATACCCCTTATTATATGTAACCACTGATTTTATTAACTCTAGTAGCAGGCTCAGAAATGGTGAGTGATACTAGTAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16951761 182 - 59632846 ATGGCAGTTCTTTATGTCTTTGTAATACAAATTATATGTACTTGGTATGTAGCTTTTCCACCTTTAAG-CTTTGAGTTGCATGAGGACAAAT----AATAAATGTCAGTTGAATAAACAGATCCATGCTGGATCT-----ATTTTTAATCACTAC----------TCTAA--ACAGTCTCAGAACCAGATGGGCATACAGATGC i canFam3.chr16 C 0 C 0 e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=115126.000000 s hg38.chr4_KI270789v1_alt 113036 10 + 205944 GATTGAA--TTT---- s panTro5.chr4 192900403 10 + 194502333 GATTGAA--TTT---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784074 10 + 195804263 GATTGAA--TTT---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821363 12 + 4876863 GATTGAATCTCT---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710487 10 + 115148730 GATTGAA--TTT---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992501 10 + 190429646 GATTGAA--TTT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935276 10 + 189454096 GATTGAA--TTT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327010 10 - 25927173 GATTGAA--TTT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356316 10 + 4669795 GATTGAA--TTT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314408 10 + 135778131 GACTGAA--TTT---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767048 10 - 2847728 GATTGAA--TTT---- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882883 10 + 2368649 GATTGAA--TTT---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612781 10 - 190850796 GATTGAA--TTT---- i calJac3.chr3 I 302 C 0 s saiBol1.JH378165 13100389 10 - 14256875 GATTGCA--ttt---- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 995814 10 - 2196201 GATTGAA--ttt---- i cebCap1.NW_016107886v1 C 0 I 439 s aotNan1.NW_018492112v1 3390621 10 - 5030052 GATTGAA--ttt---- i aotNan1.NW_018492112v1 C 0 I 401 s proCoq1.NW_012145301v1 3948322 10 + 3993831 AATTGAA--TTT---- i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86606350 10 - 129401213 TAATGAA--TTC---- i mm10.chr8 C 0 I 4 s canFam3.chr16 16951943 14 - 59632846 AATTTAA--TTTCTTT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=81210.000000 s hg38.chr4_KI270789v1_alt 113046 10 + 205944 CTCTATTTTT s panTro5.chr4 192900413 9 + 194502333 CTCTATTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784084 10 + 195804263 CTCTATTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821375 10 + 4876863 CTCTATTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710497 10 + 115148730 CTCTATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992511 10 + 190429646 CTCTATTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935286 10 + 189454096 CTCTATTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327020 10 - 25927173 CTCTATTATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356326 10 + 4669795 CTCCATTATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314418 10 + 135778131 CTCTATTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767058 10 - 2847728 CTCTATTATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882893 10 + 2368649 CTCTATTATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612791 10 - 190850796 CTCTATTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13100399 10 - 14256875 ttttttttct i saiBol1.JH378165 C 0 C 0 s proCoq1.NW_012145301v1 3948332 10 + 3993831 CTCTATTTTT i proCoq1.NW_012145301v1 C 0 I 251 s mm10.chr8 86606364 10 - 129401213 TTGTATTTTT i mm10.chr8 I 4 C 0 s canFam3.chr16 16951957 10 - 59632846 CTCTATTTAT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 995824 439 - 2196201 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e aotNan1.NW_018492112v1 3390631 401 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=100827.000000 s hg38.chr4_KI270789v1_alt 113056 15 + 205944 AGTTTCTTTCAAATA s panTro5.chr4 192900422 10 + 194502333 -----CTTTCAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784094 15 + 195804263 ATTTTCTTTCAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821385 15 + 4876863 ATTTTCTTTCAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710507 15 + 115148730 ATTTTCTTTCAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992521 15 + 190429646 ATTTTCTTTCAAATa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935296 15 + 189454096 ATTTTCTTTCAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327030 15 - 25927173 ATTTTCTTTCAAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356336 15 + 4669795 ATTTTCTTTCAAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314428 15 + 135778131 ATTTTCTTTCAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767068 15 - 2847728 ATTTTCTTTCAAATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882903 15 + 2368649 ATTTTCTTTCAAATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612801 10 - 190850796 ATTTT-----AAaca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13100409 12 - 14256875 ttttt---tgagaca i saiBol1.JH378165 C 0 I 3655 s mm10.chr8 86606374 15 - 129401213 CTTTTCTTTCAGGTA i mm10.chr8 C 0 I 3 s canFam3.chr16 16951967 15 - 59632846 CTTTAATTTCAAATG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 995824 439 - 2196201 I e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e aotNan1.NW_018492112v1 3390631 401 - 5030052 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=21190.000000 s hg38.chr4_KI270789v1_alt 113071 6 + 205944 CTTGca s panTro5.chr4 192900432 6 + 194502333 CTTGca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784109 6 + 195804263 CTTGca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821400 6 + 4876863 CTTaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710522 6 + 115148730 CATGca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992536 6 + 190429646 cacgcg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935311 6 + 189454096 CATGCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327045 6 - 25927173 CATGCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356351 6 + 4669795 CATGca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314443 6 + 135778131 CATGCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767083 6 - 2847728 CATGca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882918 6 + 2368649 CATGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612811 6 - 190850796 cacaca i calJac3.chr3 C 0 C 0 s mm10.chr8 86606392 3 - 129401213 CCC--- i mm10.chr8 I 3 C 0 s canFam3.chr16 16951982 4 - 59632846 --caca i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 995824 439 - 2196201 I e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e aotNan1.NW_018492112v1 3390631 401 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=44199.000000 s hg38.chr4_KI270789v1_alt 113077 48 + 205944 cacacacagacacacacacacacacacacagacacacac--acacacaca s panTro5.chr4 192900438 42 + 194502333 cacacacagacacacacagacacacagaca------cac--acacacaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784115 38 + 195804263 cacacacagacacacacagacacacagaca------------cacacaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821406 16 + 4876863 cacacaca----------------------------------cacacaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710528 49 + 115148730 cacacacacacagacacagacacacacacacagacacaca-agacacaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992542 28 + 190429646 cacagacacacgcgcgcacg----------------------cgcgcaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935317 28 + 189454096 cacagacacacgtgcgcacg----------------------cgcacaca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327051 32 - 25927173 cacagacacacgcgcgcacg--caca----------------cacacaca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356357 34 + 4669795 cacagacacacacacacacacacaca----------------cacacaca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314449 17 + 135778131 CGCATACACACACACAC--------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767089 34 - 2847728 cacacacacacacacacacacacaca----------------cacacaca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882924 26 + 2368649 CACAGACACACGCGTGCATG------------------------TGCACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612817 50 - 190850796 cacacgcacgcgcccatacgcatgcacacacacacacgcagacacacaca i calJac3.chr3 C 0 I 2 s cebCap1.NW_016107886v1 996263 46 - 2196201 cacacacacacacacatgcgcacacgtgcacacacac----acacacacg i cebCap1.NW_016107886v1 I 439 I 2 s mm10.chr8 86606395 5 - 129401213 --CAGGC------------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16951986 37 - 59632846 tacacatagatgtacacacatgcacacacag-----------cccaca-- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e aotNan1.NW_018492112v1 3390631 401 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=88050.000000 s hg38.chr4_KI270789v1_alt 113125 11 + 205944 cacacacac--aG s panTro5.chr4 192900480 11 + 194502333 cacacacac--aG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784153 11 + 195804263 cacacacac--aG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821422 11 + 4876863 cacacacac--CC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710577 11 + 115148730 cacagacac--ag i nomLeu3.chr7b C 0 I 324 s rheMac8.chr5 188992570 11 + 190429646 cacacacac--aG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935345 11 + 189454096 cacacacac--aG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327083 11 - 25927173 cacacacac--aG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356391 11 + 4669795 cacacacac--aG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314466 2 + 135778131 -----------AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767123 13 - 2847728 cacacacacaGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882950 11 + 2368649 CACACACAC--AG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612869 11 - 190850796 cacacacac--aG i calJac3.chr3 I 2 C 0 s cebCap1.NW_016107886v1 996311 11 - 2196201 cacacacac--aG i cebCap1.NW_016107886v1 I 2 C 0 s aotNan1.NW_018492112v1 3391032 11 - 5030052 cacacacac--aG i aotNan1.NW_018492112v1 I 401 C 0 s mm10.chr8 86606400 9 - 129401213 CATGCACAT---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16952023 11 - 59632846 cacatacac--aT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=767790.000000 s hg38.chr4_KI270789v1_alt 113136 96 + 205944 CTTCCTTGCAGTTTCCCAGAAATACAATTCCagagccacaggtccctcatctcacaacttgtccccatgttctcatttgtccctctgatcttactt s panTro5.chr4 192900491 96 + 194502333 CTTCCTTGCAGTTTCCCAGAAATAaaattccagagccacaggtccctcatctcacaacttgtccccatgttctcatttgtccctctgatcttactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784164 96 + 195804263 CTTCCTTGCAGTTTCCCAGAAATAaaattccagagccacaggtccctcatctcacaacttgtccccatgttctcatttgtccctctgatcttactt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821433 96 + 4876863 CTTCCTTGCAGTTTCCCAGAAATACAATTCCagagtcacaggtccctcatctcacaacttgtccccatgttctcatttgtccctctgatcttactt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188992581 96 + 190429646 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTGATCTTACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935356 96 + 189454096 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTGATCTTACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327094 96 - 25927173 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTGATCTTACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356402 96 + 4669795 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTGATCTTACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314468 96 + 135778131 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTCATCTTACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767136 96 - 2847728 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCTATAGGTCCCTCATCTGACAGCTTGTCCCCATGTTCTCATTTGTCCCTCTGATCTTACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 882961 96 + 2368649 CTTGCTTGCAGTTTCCCAGAAATACAATTCCAGAGCGACAGGTCCCTCATCTGATGACTTGTCCCCACGTTCTCATTTGTCCCTCTGATCTTACTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612880 96 - 190850796 CTTGCTTGCAGTTTCCCAGAAATATGATTCCCGAGCTGCAGGTTCCTCATCTCCCAACCTGTCCCCATGTTCTCATTTGTCCCTCCGATCTCATTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996322 96 - 2196201 CTTGCTTCCAGTTTCCCAGAAATACGATTCTGGAGCTGCAGGTCCCTCATCTCACAACTTGCCCCCACGTTCTCATTTGTCCCTCTGATCTCATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391043 95 - 5030052 CTTGCTTGCAGTTT-CCAGAAATACGATTCCGGAGCTTCAGGTCCCTCATCTCCCAACTTGTCCCCATGTTCTCATTTGTCCCTTTGATCTCATTT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86606409 87 - 129401213 CTTGCTTGTAACATTTTAGGAATAAAATTTCAGGACT--------CTGATTTCCCAACCCTTCTCACCATTCTCATTTAT-CTTTTGCTTTCAttt i mm10.chr8 C 0 I 179 s canFam3.chr16 16952034 49 - 59632846 CTTGCTTGCAATTTTCCAAAAGTAAAATGCCAATGCTGCAGGTCCACCA----------------------------------------------- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e saiBol1.JH378165 13100421 3655 - 14256875 I e nomLeu3.chr7b 112710588 324 + 115148730 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=784974.000000 s hg38.chr4_KI270789v1_alt 113232 131 + 205944 gtcagcccttcccagcacctggggatcgtgcattgtgAAGCAGCACACTCAGGGGTTCCCTGCTCCGTGTTTCCCTCCCTAATGCCAAAGGGCCAGGAGCCATTGTGTCGCAGAGTAGGCTGCTTCACTTG s panTro5.chr4 192900587 131 + 194502333 gtcagcccttcccagcacctggggattgtgcattgtgAAGCAGCACACTCAGGGGTTCCCTGCTCCGTGTTTCCCTCCCTAATGCCAAAGGGCCAGGAGCCATTGTGTCGCAGAGTAGGCTGCTTCACTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784260 131 + 195804263 gtcagcccttcccagcacctggggattgtgcattgtgAAGCAGCACACTCAGGGGTTCCCTGCTCCGTGTTTCCCTCCCTAATGCCAAAGGGCCAGGAGCCATTGTGTCGCAGAGTAGGCTGCTTCACTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821529 131 + 4876863 gtcagcccttcccagcacctggggattgtgcattgtgAAGCAGCACACTCAGGGGTTCCCTGCTCCGTGTTTCCCTCCCTAATGCCAAAGGGCCAGGAGTCATTGTGTCGCAGAGTAGGCTGCTTCACTTG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188992677 108 + 190429646 GTCAGTGCTTCCCAGCACCTGGGG-------ATTGTGAAGCAGCACACGCAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGGAGCCCCTGTGTCACAGTGTAGGCTGCTTCACTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935452 108 + 189454096 GTCAGTGCTTCCCAGCACCTGGGG-------ATTGTGAAGCAGCACACGCAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGGAGCCACTGTGTCACAGTGTAGGCTGCTTCACTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327190 108 - 25927173 GTCAGTGCTTCCCAGCACCTGGGG-------ATTGTGAAGCAGCACACGCAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGGAGCCACTGTGTCACAGTGTAGGCTGCTTCACTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356498 108 + 4669795 GTCAGTGCTTCCCAACACCTGGGG-------ATTGTGAAGCAGCACACGCAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGAAGCCATTATGTCACAGTGTAGGCTGCTTCACTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314564 108 + 135778131 GTCAGCGCTTCCCAGCACCTGGGG-------ATTGTGAAGCAGCACACGCAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGGAGCCACTGTGTCACAGTGTAGGCTGCTTCACTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767232 108 - 2847728 GTCAGTGCTTCCCAGCACCTGGGG-------ATTGTGAAGCAGCACACACAGGGGCTCCCTGCTCCATGTTTCCCT----------------CCAGGAGCCACTGTGTCACAGTGTAGGCTGCTTCACTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883057 105 + 2368649 GCCAGCACTTCCCAGCACCCGGGG-------ATTGTGAAGCAGCACACGCA-GGGCTCCCTGCTCCATGTTTCC------------------CCAGGAGCCACTGTGTCACAGTGCAGGCTGCTTTACTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189612976 123 - 190850796 GTCAGCGCTTCCCAGCACCTGGGG-------ACCGTGAAGCAGCCCACTCAGGGGCTCCCTGCTCCATCTTTT-CCCACTAATGCCAAAGGACCAGGAGCCATCGTGCCAGAAAGTAGACTGCTTTACTCG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996418 122 - 2196201 GTCAGCACTTCCCAGCACCTGGGG-------ACCCTGAAGCAGCCCACTCAGGGGCTCCCTGCTCCGTCTTTT-CCCGCTAATGCCTAAGGA-CAGGGGCCATCGTGCCACAAAGTAGGCTGCTTTACTCG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391138 123 - 5030052 GTTAGCGCTTCCCAGCACCTGGGG-------ACCATGAAGCAG-CCACTCAGGGGCTCCCTGCTCCATCTTTTCCCCGCTAATGCCAAAGGACCAGGAGCCATCGTGCCACAAAGTACACTGCTTTACTTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16952083 113 - 59632846 --CAA--CCTCCTAGCACCTGGGG-------ATTGTGAAGCAGCACACTCAACAG-----TGCTC--TATTTCCCTTCCTTGTGCCAAAGGACCAGGAGCCACTGGGCCACAAGATAAATGGCTTTATTTT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444346 63 - 2520184 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e nomLeu3.chr7b 112710588 324 + 115148730 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=119217.000000 s hg38.chr4_KI270789v1_alt 113363 12 + 205944 TGCCTGAGGGAG s panTro5.chr4 192900718 12 + 194502333 TGCCTGAGGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784391 12 + 195804263 TGCCTGAGGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821660 12 + 4876863 TGCCTGAGGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188992785 12 + 190429646 TGCCTGAGGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935560 12 + 189454096 TGCCTGAGGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327298 12 - 25927173 TGCCTGAGGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356606 12 + 4669795 TGCCTGAGGGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314672 12 + 135778131 TGCCTGAGGGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767340 12 - 2847728 TGCCTGAGGGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883162 12 + 2368649 TGCCTGAGGGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613099 12 - 190850796 TGCCTGAGGGAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996540 12 - 2196201 TGCCTGAGGCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391261 12 - 5030052 TGCCTGAGGGAG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16952196 12 - 59632846 TAGTGGAGAGGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444409 12 - 2520184 TGCCAGAGGGAG i dasNov3.JH570353 I 63 C 0 e proCoq1.NW_012145301v1 3948342 251 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e nomLeu3.chr7b 112710588 324 + 115148730 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=403395.000000 s hg38.chr4_KI270789v1_alt 113375 55 + 205944 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAGTGTGGACGCTCAGACAGA s panTro5.chr4 192900730 55 + 194502333 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAGTGTGGACGCTCAGACAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784403 55 + 195804263 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAGTGTGGACGCTCAGACAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821672 55 + 4876863 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAGTGTGGATGCTCAGACAGA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188992797 51 + 190429646 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAATGTGGACGCT----CAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935572 51 + 189454096 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAATGTGGACGCT----CAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327310 51 - 25927173 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAATGTGGACGCT----CAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356618 51 + 4669795 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAACGTGGACGCT----CAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314684 55 + 135778131 GACAGACAATTTGCTCATCAGGATTCAGGGAGGAGAATGTGGACGCTCAGACAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767352 51 - 2847728 GACAGACAATATGCTCATCAGGATTCAGGGAGGAGAACGTGGACGCT----CAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883174 55 + 2368649 GACAGGCAATATGCTCATCAGGATTCAGGGAGGAGAATGTGGACGCTCAGACAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613111 46 - 190850796 GACAGACAGTGTGCTCCTCTGGATC--AGGA-GACAATGTGGGCACT----CA-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996552 51 - 2196201 CACAGACAGTGTGCTCCTCCGGATC--AGGAGGAGAATGCAGGCACTCAGACA-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391273 51 - 5030052 GACAGACAGTGTGCTCCTCTGGATC--AGGAGGAGAATGCGGGCACTCAGACA-- i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3948593 55 + 3993831 GACAGACAGTATGTTCAGCAGGACTCAGGGAGGAGAATCTGGGCGTTCAGACAGA i proCoq1.NW_012145301v1 I 251 C 0 s canFam3.chr16 16952208 43 - 59632846 GACACACAGTAGATTCTTT--------GGGAGGAGAATCTAAATGCT----CAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444421 55 - 2520184 GGCAGACTGTTTGCTCCTGGAGATTCAGGAAGGAGAATCTGCACACTCCGAGGAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e nomLeu3.chr7b 112710588 324 + 115148730 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=49910.000000 s hg38.chr4_KI270789v1_alt 113430 4 + 205944 GGAG s panTro5.chr4 192900785 4 + 194502333 GGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784458 4 + 195804263 GGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821727 4 + 4876863 GGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710912 4 + 115148730 GGAG i nomLeu3.chr7b I 324 C 0 s rheMac8.chr5 188992848 4 + 190429646 GGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935623 4 + 189454096 GGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327361 4 - 25927173 GGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356669 4 + 4669795 GGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314739 4 + 135778131 GGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767403 4 - 2847728 GGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883229 4 + 2368649 GGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613157 4 - 190850796 GGAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996603 4 - 2196201 GGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391324 4 - 5030052 GGAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3948648 4 + 3993831 GGAG i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16952251 4 - 59632846 GGCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444476 4 - 2520184 GAAG i dasNov3.JH570353 C 0 I 41 e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=24024.000000 s hg38.chr4_KI270789v1_alt 113434 2 + 205944 TG s panTro5.chr4 192900789 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784462 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821731 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710916 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992852 2 + 190429646 TG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935627 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327365 2 - 25927173 TG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356673 2 + 4669795 TG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314743 2 + 135778131 TG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767407 2 - 2847728 TG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883233 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613161 2 - 190850796 CG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996607 2 - 2196201 TG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391328 2 - 5030052 TG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3948652 2 + 3993831 TG i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16952255 2 - 59632846 TG i canFam3.chr16 C 0 I 74 e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444480 41 - 2520184 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=33105.000000 s hg38.chr4_KI270789v1_alt 113436 7 + 205944 Ct------gtctt s panTro5.chr4 192900791 7 + 194502333 Ct------gtctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784464 7 + 195804263 Ct------gtctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821733 7 + 4876863 Ct------gtctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710918 7 + 115148730 Ct------gtctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992854 13 + 190429646 CTGTCGCTgtctg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935629 13 + 189454096 CTGTCGCTgtctg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327367 13 - 25927173 CTGTTGCTgtctg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356675 13 + 4669795 CTGTCGCCgtctg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314745 13 + 135778131 CTGTCGCTGTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767409 13 - 2847728 Ctgtcgttgtctg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883235 7 + 2368649 CT------gtctg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613163 7 - 190850796 Ct------gtctt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996609 7 - 2196201 CT------GAAtt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391330 7 - 5030052 Ct------gtctt i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3948654 7 + 3993831 Ct------gtctt i proCoq1.NW_012145301v1 C 0 I 466 e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444480 41 - 2520184 I e canFam3.chr16 16952257 74 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=2340904.000000 s hg38.chr4_KI270789v1_alt 113443 287 + 205944 tg----tttctcgctgctatatcagaatgccacagactgggtaatttataataaacagaaatttgcttcctcacagttctgaaggctgagaaggtcaggatttaggggccagcatctggtgaggggcttctcactgcattcttccacggtgccaggtggcagtgcaagaaagcacataagacacacagcaagaggaggctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacttttggagacacattcaaaccataa s panTro5.chr4 192900798 287 + 194502333 tg----tttcgcgctggtatatcagaatgccacagactgggtaatttataataaacagaaatttgcttcctcacagttctgaaggctgagaaggtcaggatttaggggccagcatctggtgaggggcttctcactgcattcttccacggtgccaggtggcagtgcaagaaagcacataagacacacagcaagaggaggctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacttttggagacacattcaaaccataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784471 287 + 195804263 tg----tttcgcgctggtatatcagaatgccacagactgggtaatttataataaacagaaatttgcttcctcacagttctgaaggctgagaaggtcaggatttaggggccagcatctggtgaggggcttctcactgcattcttccacggtgccaggtggcagtgcaagaaagcacataagacacacagcaagaggaggctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacttttggagacacattcaaaccataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3821740 287 + 4876863 tg----tttcgcgctgctatatcagaatgccacagactgggtaatttataataaagagaaatttgcttcctcacagttctgaaggctgagaaggtcaggatttaggggccagcatctggtgaggggcttctcaccgcattcttccacggtgccaggtggcagtgcaagaaagcacataagacacacagcaagaggaggctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgtccaacacataaacttttggagacatattcaaaccataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112710925 287 + 115148730 tg----tttcgcgctgctatatcagaataccacagactgggtaatttataataaacagaaatttgcttccttgcagttctgaaggctgagaaggtcaggatttaggggccagcatctggtgaggggcttctcactgcatccttccacggtgccaggtggcagtgcaagaaagcacataagagagacagcaagagaaagctgaactcaattttataacaaacccactcaccccataatgaatttactcctgtgTTCAGCACAGAAACTTCTGGAGACACATTCAAACCATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188992867 286 + 190429646 tg----cttggtgctgctatatcagaataccacagactgggtaatttataataaacagaaatttgctttctcacagttctgaaggctgag-agttcaggatttaggggccagcacctggtgacgggcttctcgctgcatccttccacggtgccaggcggcagtgcaggaaagcacgtaagagagactgcaagagagagctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacatttggggacacgttcaaaccataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935642 286 + 189454096 tg----cttggtgctgctatatcagaataccacagactgggtaatttataataaacagaaatttgctttctcacagttctgaaggctgag-agttcaggatttaggggccagcacctggtgaggggcttctcgctgcatccttccacggtgccaggcggcagtgcaggaaagcacgtaagagagactgcaagagagagctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacatttggggacacgttcaaaccataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327380 286 - 25927173 tg----cttggtgctgctatatcagaataccacagactgggtaatttataataaacagaaatttgctttctcacagttctgaaggctgag-agttcaggatttaggggccagcacctggtgaggggcttctcgctgcatccttccacggtgccaggcggcagtgcaggaaagcacgtaagagagactgcaagagagagctgaactcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacatttggggacacgttcaaaccataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356688 286 + 4669795 tg----cttggtgctgctatatcagaataccacagactgggtaatttataataaacagaaatttgctttctcacagttctgaaggctgag-agttcaggatttaggggccagcacctggtgaggggcttctcgctgcatccttccatggtgccaggcggcagtgcaggaaagcacataagagagactgcaagagagagctgagctcacttttataacaaacccactcaccccataatgaatttactcctgtgttcaatacataaacatttggggacatgttcaaaccataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134314758 284 + 135778131 Tg----cttggtgctgctatatcggaataccacagactgggtagtttataataaacagaaatttgctttctcacagttccgaaggcttag-agttcaggatttaggggccagcatctggtgaggggcttctcgctgcatccttccacggtgccaggcggcagtgcaggaaagcacat--gagagactgcaagagagagctgaactcacttttgtaacaaacccactcaccccataatgaatttactcctgtgttcaacacataaacttttggggacacattcaaactataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767422 286 - 2847728 tg----cttggtgctgctatatcagaataccacagactgggtagtttataataaacagaaatttgctttctcacagttctgaaggctgag-aattcaggatttaggggccagcacctggtgaggggcttcttgctgcatccttccgcggtgccaggcggcagtgcaggaaagcacgtaagagagactgcaagagagagctgaactcacttttataacaaacccactcaccgcctaatgaatttactcctgtgttcaacacataaacatttggggccacgttcaaaccataa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883242 287 + 2368649 tg----cttggtgctgctatatcagaataccacagactgggtcatttataataaacagaaatttgctttctcacagttctgaaggctgagaagttcaggatttaggggccagcatctggtgaggggcttctcgctgcatccttccacggtgccaggcggcagtgcaggaaagcacgtaagagagactgcaagagagagctgaactcacttttgtaacaaacccactcaccccatcatgaatttactcctgtgttcaacacataaactttcggggacacattcgaaccataa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613170 291 - 190850796 catccatttcgtgctgctgtgtcagaataccccaggctgggtcatttataatcaacagaaatctgctttctcacagttctgaaggctgagaagtgcatgatttaggggccagtatctgctgagggtcttcttgctatctccttccatggtgccaggtggcagtgcaagaaagcacgtgagagagacggcaagggaaagctgaactcacttttacaacaaggccactctccccgtaatgaatttactcctgtgTTCAACAGAGAAACTTCTGGGGACACACTCAAATCACAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996616 279 - 2196201 cgttcattttgtgctgctgtgtcagaataccccaggctgggtcatttacaatcaacagaaatctgctttctcacagttctgaaggctgagaagtgcacgatttaggggccggtgtctgttgaggctcttcttgctacctctttccgcggtgccacgtggcagtgca------------agagagacggcaaaagagagctgaactcacttttacaacagggccattcttccggtaatgaatttactcctgtgttcaacacagaaacttctggggacacattcaaaccacaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391337 291 - 5030052 cgttcgttttgtgctgctgtgtcagaataccccaggctcggtcatttataatcaacagaaatctgctttcccacagttctgaaggctgagaagtgcacgatttaggggccggtatctgttgagggtcttcatgctatctccttccatggtgccaggtggcagtgcaagaaagcacgtgagagagacagcaagagaaagctgaactcacttttacaacaaggccactctccccgtaatgaatttactcAGGTGTTCAACACAGAAACTTCTGGAGACACACTCAAACCACAA i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3948661 466 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e dasNov3.JH570353 1444480 41 - 2520184 I e canFam3.chr16 16952257 74 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=448225.000000 s hg38.chr4_KI270789v1_alt 113730 51 + 205944 caTGTACTATTGAAATGGAGCTCTGACAGGAGACACCT---TGGGTGCCTCAAG s panTro5.chr4 192901085 54 + 194502333 caTGTACTATTGAAATGGAGCTCTGACAGGAGACACCTGTCTGGGTGCCTCAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784758 54 + 195804263 caTGTACTATTGAAATGGAGCTCTGACAGGAGACACCTGTCTGGGTGCCTCAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822027 54 + 4876863 caTGTGCTATTGAAATGGAGCTCTGACAGGAGACACCTGTCTGGGTGCCTCAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711212 54 + 115148730 CATGTACCATTGAAATGGAGCTCTGACAGGAGACACCTATCTGGGTGTCTCGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993153 54 + 190429646 caTGTACTATTGAAATGTCGCTCTGACAGGAGACACCTGTCTGGGTGCCCCAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935928 54 + 189454096 caTGTACTATTGAAATGTCGCTCTGACAGGAGACACCTGTCTGGGTGCCCCAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327666 54 - 25927173 caTGTACTATTGAAATGTCGCTCTGACAGGAGACACCTGTCTGGGTGCCCCAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3356974 54 + 4669795 caTGTACTATTGAAATGTCGCTCTGACAGGAGACACCTGGCTGGGTGCCCCAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315042 54 + 135778131 caTGTACTATTGAAATGTCACTCTGACAGGGGACACCTGTCTGGGTGCCCCAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767708 53 - 2847728 caTGTA-TATTGAAATGTCGCTCTGACAGGAGACACCTGTCTGGGTGCCCCAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883529 54 + 2368649 caTGTACCATTGAAATGTCGCTCTGACAGGAGACACCTGTCTGGGTGCCCCAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613461 54 - 190850796 CGTGCACCATTGAAATGCGGCTCTGACAGGAGACAACTCTGTGGGTGCCCCAAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996895 53 - 2196201 caTGCGCCATTGAAATGCAGCTCTGACAGGAGACACCTCCCTGGGTG-CCCAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391628 54 - 5030052 CATGCGCCATTGAAACGCAGCTCTGACAGGAGACACCTCCCTGGGTGCCCCAAG i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1444521 53 - 2520184 CAGGTGCTATGGAAGCGGAGCTCTCAACGATTGTAGCT-TCTTGGTACCATATT i dasNov3.JH570353 I 41 C 0 e proCoq1.NW_012145301v1 3948661 466 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e canFam3.chr16 16952257 74 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=39576.000000 s hg38.chr4_KI270789v1_alt 113781 3 + 205944 CTG s panTro5.chr4 192901139 3 + 194502333 CTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784812 3 + 195804263 CTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822081 3 + 4876863 CTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711266 3 + 115148730 CTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993207 3 + 190429646 CTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935982 3 + 189454096 CTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327720 3 - 25927173 CTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357028 3 + 4669795 CTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315096 3 + 135778131 CTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767761 3 - 2847728 CTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883583 3 + 2368649 CTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613515 3 - 190850796 CTG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 996948 3 - 2196201 CTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3391682 3 - 5030052 CTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16952331 3 - 59632846 CTG i canFam3.chr16 I 74 C 0 s dasNov3.JH570353 1444574 3 - 2520184 CTG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3948661 466 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=180620.000000 s hg38.chr4_KI270789v1_alt 113784 15 + 205944 GAGATTCTGCTTTGC s panTro5.chr4 192901142 15 + 194502333 GAGATTCTGCTTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784815 15 + 195804263 GAGATTCTGCTTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822084 15 + 4876863 GAGATTCTGCTTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711269 15 + 115148730 GAGATTCTGCTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993210 15 + 190429646 GAGATTCTGCTTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187935985 15 + 189454096 GAGATTCTGCTTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327723 15 - 25927173 GAGATTCTGCTTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357031 15 + 4669795 GAGATTCTGCTTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315099 15 + 135778131 GAGATTCTGCTTTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767764 15 - 2847728 GAGATTCTGCTTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883586 15 + 2368649 GAGATTCTGCTTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189613518 15 - 190850796 GAGGTTCTGCTTtgc i calJac3.chr3 C 0 I 2304 s cebCap1.NW_016107886v1 996951 15 - 2196201 GAGGTTCTCCTTtgc i cebCap1.NW_016107886v1 C 0 I 2343 s aotNan1.NW_018492112v1 3391685 15 - 5030052 GAGGTTCTGCTTtgc i aotNan1.NW_018492112v1 C 0 I 2363 s proCoq1.NW_012145301v1 3949127 15 + 3993831 GAGGTTCTACTGTGC i proCoq1.NW_012145301v1 I 466 C 0 s canFam3.chr16 16952334 15 - 59632846 GAGGTTTTGCTATGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444577 14 - 2520184 GAGATTCT-CTGTGA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=439586.000000 s hg38.chr4_KI270789v1_alt 113799 57 + 205944 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG s panTro5.chr4 192901157 57 + 194502333 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784830 57 + 195804263 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822099 57 + 4876863 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTCCTTGGGCACTGGGACCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711284 74 + 115148730 ATCCCCAGTTAATAATTAGTAGATAAAAGAAAGAGACTCTGTGGGCACTGAGACTCTGTGGGCACTGGGACCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993225 57 + 190429646 ATCCCCAGTTAATAATTAGTAGACAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936000 57 + 189454096 ATCCCCAGTTAATAATTAGTAGACAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327738 57 - 25927173 ATCCCCAGTTAATAATTAGTAGACAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357046 57 + 4669795 ATCCCCAATTAATAATTAGTAGACAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315114 55 + 135778131 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTC--TGGGCACTGGGACCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767779 57 - 2847728 ATCCCCAGTTAATAATTAGTAGACAAAAGGAA-----------------GAGACTCTTTGGGCACTGGGACCTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883601 57 + 2368649 ATCCCCAGTTAATAATTAGTAGATAAAAGAAA-----------------GAGACTCTTTGGGCACTGGGACCTG i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3949142 57 + 3993831 ATGCCCAGTTAATCATTAGTGGGTAAAAGAAG-----------------GAGACTATTTGGGCACTGGGACCTG i proCoq1.NW_012145301v1 C 0 I 51 s canFam3.chr16 16952349 53 - 59632846 ATCCTCA-TTAATAATTAGTGAGTAAAAG--------------------GAGACTATTTGGGCACTGGGACCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444591 56 - 2520184 ATCTGCAGCTAATTCTTAGCAGGGAAGAGGGG-----------------GCGACTAGCTGCTCAC-AGGACCTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=408341.000000 s hg38.chr4_KI270789v1_alt 113856 65 + 205944 GGGTCTATGA---ATGTTGAAAAGGAAGAGCAAACCATGACATCAGGACTTGAGTTTCTCACACCCCT s panTro5.chr4 192901214 65 + 194502333 GGGTCTATGA---ATGTTGAAAAGGAAGAGCAAACCATGACATCAGGACCTGAGTTTCTCACACCCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784887 65 + 195804263 GGGTCTATGA---ATGTTGAAAAGGAAGAGCAAACCATGACATCAGGACCTGAGTTTCTCACACCCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822156 65 + 4876863 GGGTCTATGA---ATGTTGAAAAGGAAGAGCAAACCATGACATCAGGACCTGAGTTTCTCACACCCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711358 65 + 115148730 GGGTCTATGA---ATGTTGAAAAGGAAGAGCGGACCATGACATCAGGACCTGAGTTTCTCACACACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993282 68 + 190429646 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936057 68 + 189454096 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327795 68 - 25927173 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357103 68 + 4669795 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315169 68 + 135778131 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCATGACATCAGGGCCTGAGTTTCTCACACACCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767836 68 - 2847728 GGGTCTATGAGTGGTGTTGAAAAGGAAGAGCAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883658 68 + 2368649 GGGTCTGTGAGTGGTGTTGAAAAGGAAGAGTAAACCGTGACATCAGGGCCTGAGTTTCTCACACACCT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16952402 63 - 59632846 TGATCTATGA---AAGTTGTAATGGAAG-GCGAACTATGACAT-AGGGACTGAGCTGCCTGTGCCTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444647 61 - 2520184 TGGCCTATCA---AAGTGGAAGTGGAAAAG-AAACCCTATTATCAGGACCAGAGCTTC--ATGCCCC- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949199 51 + 3993831 I e micMur3.chr14 17508294 505 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=987343.000000 s hg38.chr4_KI270789v1_alt 113921 120 + 205944 TTCTCCCA-CCCCCACCCAGGCAAAAATAGATACAAAAGAAGAAGGAATTACAGAAGAAGTCACATAACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA s panTro5.chr4 192901279 120 + 194502333 TTCTCCCA-CTCCCACCCAGGCAAAAGTAGATACAAAAGAAGAAGGAATTACAGAAGAAGTCACATAACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGAACAGAATGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192784952 120 + 195804263 TTCTCCCA-CTCCCACCCAGGCAAAAGTAGATACAAAAGAAGAAGGAATTACAGAAGAAGTCACATAACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGAACAGAATGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822221 120 + 4876863 TTCTCCCA-CTCCCACCCAGGCAAAAGTAGATACAAAAGAAGAAGGAATTACAGAAGAAGTCACATAACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711423 120 + 115148730 TTCTCCCA-CACCCACCCAGGC-AAAGTAGATACAAAAGAAGAAGGAATTACAGAAGAAGTCACATAACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTTGGAAGACCAGAATGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993350 120 + 190429646 TTCTCCCT-CCCCCACCCAGACAAAAATAGATACAAAAGGAGGAGGAATTACAGAAGAAGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936125 120 + 189454096 TTCTCCCT-CCCCCACCCAGACAAAAATAGATACAAAAGGAGGAGGAATTACAGAAGAAGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327863 120 - 25927173 TTCTCCCT-CCCCCACCCAGACAAAAATAGATACAAAAGGAGGAGGAATTACAGAAGAAGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357171 120 + 4669795 TTCTCCCT-CCCCCACCCAGGCAAAAATAGATACAAAAGGAGGAGGAATTACAGAAGAAGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGCATACTT-GAAGACCAGAATGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315237 120 + 135778131 TTCTCCCT-CCCCCAACCAGGCAAAAGTAGATACAACAGAAGGAGGAATTACAGAAGTCGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2767904 116 - 2847728 TTCTCCCT-CCCCCACCCCGGCAAAAATAGATACAAAAGGAGGAGGAATTACAGAAGAAGTCACATGACATTATTGCCTACA----ACT--GT--TTACCTTGCATACTT-GAAGACCAGAATGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883726 120 + 2368649 TTCTCCCT-CCCCCACCCAGGCAAAAGTAGATACAAAAGAAGGAGGAATTACCGAAGAAGTCACATGACATTATTGCCTACAACTGACT--GT--TTACCTTGAATACTT-GAAGACCAGAATGAA i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17508799 120 - 93316391 TTCTCCCA-GCCCCACCCAGGCAAAAGTGGATACAAAACAAGAGGGAACAACAGAAGAAGTCACATGACATTTTTGGCTACAAGGGGTT--GT--TTGCCTTGAAAACTT-GAAAACCTGAATGAA i micMur3.chr14 I 505 I 455 s proCoq1.NW_012145301v1 3949250 118 + 3993831 TTCTCCCACCCCCCACACAGGCAAAGGTGGATACAAAAAAAGAGGGAACAAC---AGAAGTCACATGACATTTTTGTCTATAAGAGATC--GT--TTGCCTTGAAAACTT-GAAAACCAGAATGAA i proCoq1.NW_012145301v1 I 51 C 0 s canFam3.chr16 16952465 106 - 59632846 TTCTTCCA-TCCCCATCCAGGCAAAAGCAGATACAAAAGAAG-------------AGAAGTCACATGACATCAT---CTATAACTGACT--CTCCTTATCTTGAATAATT-GAAAATCAGAAAAAG i canFam3.chr16 C 0 I 7 s dasNov3.JH570353 1444708 102 - 2520184 -----------------CAGGC-AAAGTAGATACAAAAGAAGAAGGAATAACAGAAGA--CCACATTACAGTATTGCCTA-GACTGACTTGGT--TTGCCTTGAATTACT-GAAAAACAGAATGGA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=220593.000000 s hg38.chr4_KI270789v1_alt 114041 34 + 205944 GATTCTTGGGGTGAAGAATTACAGCCTTAGCATG-- s panTro5.chr4 192901399 34 + 194502333 GATTCTTGGGGTGAAGAATTACAGCCTTAGCATG-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785072 34 + 195804263 GATTCTTGGGGTGAAGAATTACAGCCTTAGCATG-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822341 34 + 4876863 GATTCTTAGGGTGAAGAATTACAGCTTTAGCATG-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711543 34 + 115148730 GATTCGTGGAGTGAAGAATTACAGCCTTAGCAGG-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993470 31 + 190429646 GATTCCTGGGG---AGAATTACAGCCTTAGCATG-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936245 31 + 189454096 GATTCCTGGGG---AGAATTACAGCCTTAGCATG-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24327983 31 - 25927173 GATTCCTGGGG---AGAATTACAGCCTTAGCATG-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357291 31 + 4669795 GATTCTTGGGG---AGAATTACAGCCTTAGCATG-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315357 34 + 135778131 GATTCTTGGGGAGAAGAATTACAGCCTTAGCATG-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768020 31 - 2847728 GACTCTTGGGG---AGAATTACAGCCTTAGCATG-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 883846 34 + 2368649 GATTCTTGGGGAGAAGAATTACAGCCTTAGCATG-- i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3949368 34 + 3993831 GATTCCTGGGGAGAAGAGTTAAAGCCTTAGCATG-- i proCoq1.NW_012145301v1 C 0 I 105 s canFam3.chr16 16952578 32 - 59632846 AATTAAAGAAG--AAGAATTAAAGCCTTAGTATG-- i canFam3.chr16 I 7 I 5 s dasNov3.JH570353 1444810 36 - 2520184 GATTCTTGGAGAGAAGAGTGAAAGCAGCGGCACATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e micMur3.chr14 17508919 455 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=88542.000000 s hg38.chr4_KI270789v1_alt 114075 13 + 205944 GAG-------------CAGGCCTCGG s panTro5.chr4 192901433 13 + 194502333 GAG-------------CAGGCCTCGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785106 13 + 195804263 GAG-------------CAGGCCTCGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822375 13 + 4876863 GAG-------------CAGGCCTCGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711577 13 + 115148730 GAG-------------CAGGCCTCGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993501 13 + 190429646 GAG-------------CAGGCCTCGG i rheMac8.chr5 C 0 I 83 s macFas5.chr5 187936276 13 + 189454096 GAG-------------CAGGCCTCGG i macFas5.chr5 C 0 I 83 s macNem1.NW_012013133v1 24328014 13 - 25927173 GAG-------------CAGGCCTCGG i macNem1.NW_012013133v1 C 0 I 83 s cerAty1.NW_012001672v1 3357322 13 + 4669795 GAG-------------CAGGCCTCGG i cerAty1.NW_012001672v1 C 0 I 165 s chlSab2.chr7 134315391 13 + 135778131 GAG-------------CAGGCCTCGG i chlSab2.chr7 C 0 I 82 s manLeu1.NW_012102221v1 2768051 13 - 2847728 GAG-------------CAGGCCTCGG i manLeu1.NW_012102221v1 C 0 I 82 s colAng1.NW_012116221v1 883880 13 + 2368649 GAG-------------CAGGCCTCGG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16952615 26 - 59632846 GAGGCACTGGCTACATCAGACCTTAG i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1444846 13 - 2520184 CGG-------------CAGGTGTGGG i dasNov3.JH570353 C 0 I 1 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949402 105 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=481058.000000 s hg38.chr4_KI270789v1_alt 114088 97 + 205944 T---------------------------------------------GCATCGGCTTTCAGCTAGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------AACGTCCTCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGG s panTro5.chr4 192901446 138 + 194502333 T---------------------------------------------GCATCGGCTTTCAGCTAGGCATGCCT---------------------------------------GCCAATGTTC-----------TCACTGCATCAGCTTTCAGCTAGGCATGCCTGCCAATGTTCAACGTCCCCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785119 138 + 195804263 T---------------------------------------------GCATCGGCTTTCAGCTAGGCATGCCT---------------------------------------GCCAATGTTCTCACTGCATCA-----------GCTTTCAGCTAGGCATGCCTGCCAATGTTCAACGTCCCCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822388 138 + 4876863 T---------------------------------------------GCATCGGCTTTCAGCTAGGCATGCCT---------------------------------------GCCAATGTTC-----------TCACTGCATCAGCTTTCAGCTGGGCATGCCTGCCAATGTTCAACGTCCTCCGGGGATACGGAAGGCACCATGATAGACATCTGGGCAAGTCAACAGGAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711590 138 + 115148730 T---------------------------------------------GCATCAGCTTTCAGCTAGGCATGCCT---------------------------------------GCCAATGTTC-----------TCACTGCATCAGCTTTCAGCTGGGCATGCCTGCCAATGTTCATCATCCTCCTGGGATACGGAAGGCACCATGATAGACATCTGGGCAAGTCAACAGGAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993597 96 + 190429646 ----------------------------------------------GCGTCAGCTTTCAGCTGGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCATCCTCCTGGGATAAGGAAGGTACCATGATAGACATCTGGGCAAGTAAATAGGAAGG i rheMac8.chr5 I 83 C 0 s macFas5.chr5 187936372 96 + 189454096 ----------------------------------------------gcgtcagctttcagctgGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCATCCTCCTGGGATAAGGAAGGTACCATGATAGACATCTGGGCAAGTAAATAGGAAGG i macFas5.chr5 I 83 C 0 s macNem1.NW_012013133v1 24328110 96 - 25927173 ----------------------------------------------GCATCAGCTTTCAGCTGGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCATCCTCCTGGGATAAGGAAGGTACCATGATAGACATCTGGGCAAGTAAATAGGAAGG i macNem1.NW_012013133v1 I 83 C 0 s cerAty1.NW_012001672v1 3357500 96 + 4669795 ----------------------------------------------GCATCAGCTTTCAGCTGGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ACCATCCTCCTGGGATAAGGAAGGTACCATAATAGACATCTGGGCAAGTAAATAGGAAGG i cerAty1.NW_012001672v1 I 165 C 0 s chlSab2.chr7 134315486 97 + 135778131 ---------------------------------------------TGCATCAGCTTTCAGTTGGGCATACCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCGTCCTCCTGGGATAAGGAAGGCACCATGATAGACATCTGGATAAGTAAATAGGAAGA i chlSab2.chr7 I 82 C 0 s manLeu1.NW_012102221v1 2768146 97 - 2847728 ---------------------------------------------TGCATCAGCTTTCAGCTGGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCATCCTCCTGGGATAAGGAAGGTACCATGACAGACATCTGGGCAAGTAAATAGGAAGG i manLeu1.NW_012102221v1 I 82 C 0 s colAng1.NW_012116221v1 883893 138 + 2368649 TGCATCAGCTTTCAGCCAGGCATGCCTGCCAGTGT----TCTCGCTGCATCAGCTTTCAGGTGGGCATGCCT---------------------------------------GCCAATGTTC----------------------------------------------------ATCGTCCTCCTGGGATAAGGAAGGCACCATGATAGACATCTGGGCAAGTAAATAGGAAGG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16952641 122 - 59632846 ----------------------------TGAATCTCATATCACAGGGTGTCTGGTGAAAGAGGGTTAAGTCCTTCAGG-------------------------------CAGCCAGGGCTC----------------------------------------------------ATCTTGTTCCCATGATATGGAAGGCACTATGATAGACATTGAGACAAATAAAGAAGAAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444860 124 - 2520184 ---------------------------------------------TGTGTTGGCTCTCAACGGCGCGTGCCTCACGGGGCATCCGGAAAGAGCCGGTAACTGGCTCTCACAGCCAATGAGG----------------------------------------------------attgtgctcctaccatgtggaagg------------catttaggcaagtaaagaagacaa i dasNov3.JH570353 I 1 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949402 105 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=448611.000000 s hg38.chr4_KI270789v1_alt 114185 56 + 205944 TGGATATCCAAATCTCTCTCTTCGCAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT s panTro5.chr4 192901584 56 + 194502333 TGGATATCCAAATCTCTCTCTTCGCAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785257 56 + 195804263 TGGATATCCAAATCTCTCTCTTCGCAAT--GAGTTTCCAGTTAGATGGAGGagagagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822526 58 + 4876863 TGGATATCCAAATCTCTCTCTTCGCAATGAGAGTTTCCAGTTAGGTGGAGAAGAGAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711728 56 + 115148730 TGGATATCCAAATCTCTCGCTTCGCAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993693 56 + 190429646 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936468 56 + 189454096 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328206 56 - 25927173 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357596 56 + 4669795 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315583 56 + 135778131 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768243 56 - 2847728 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884031 56 + 2368649 TGGATATCCAAATCTCTCTCTTCACAAT--GAGTTTCCAGTTAGATGGAGGAGAGAGT i colAng1.NW_012116221v1 C 0 C 0 s proCoq1.NW_012145301v1 3949507 56 + 3993831 TGGATATACAAGTCTCTCTCTCTGCAAT--GAGTTTCTGGTGAGGTGGAGGAGAGAGT i proCoq1.NW_012145301v1 I 105 I 1197 s canFam3.chr16 16952763 56 - 59632846 TATTTATGAAAATTTCTCTGTCTGGAAT--GAGTTTCCAATTAAGTAGAGGAGAGAGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1444984 55 - 2520184 -cgatatcaaaatatctctgcttgtagt--ggctttctgattaagtggaggtgaaaac i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e micMur3.chr14 17508919 455 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1416710.000000 s hg38.chr4_KI270789v1_alt 114241 224 + 205944 AATAAAACACAGTAAGTGTGGAA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCATTC----TAAG---GGGAATGGTGGAAACGTCAGTGAGAACATACCACCTGGG-TGGTTCTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTGAGC---AAAACA------------------GTGCATGAGCGAAGGATGCAATGTGAGATGGTCTGAACAGTTTAAAAGAA----- s panTro5.chr4 192901640 224 + 194502333 AATAAAACACAGTAAGTGTGGAA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCATAGGAAATCAGAGGAGA-GAAGTTCATTC----TAAG---GGGAATGGTGGAAACGTCAGTGAGAACATACCACCTGGG-TGGTTCTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTGAGC---AAAACA------------------GTGCATGAGCAAAGGATGCAATGTGAGATGGTCTGAACAGTTTAAAAGAA----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785313 224 + 195804263 aatacaacacagtaagtgtggaa-------aaga---ttaaaatgcatgttgtg--------------atataccataggaaatcagaggaga-gaggttcattc----taag---gggaatggtggaaacgtcagtgagaacataccacctggg-tggttcttgtaagatgatgtggaagagaaaaggtaaagattgagc---aaaaca------------------gtgcatgagcaaaggatgcaatgtgagatggtctgaacagtttaaaagaa----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822584 224 + 4876863 AATAAAACGCAGTAAGTGTGGGA-------AAGA---TTAAGATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCACTC----TAAG---GGGAATGGTGGAAACGTCAGTGAGAACATACCATCTGGG-TGGTTCTTGTAAGATGATATGGAAGAGAAAAGGTAAAGATTGAGC---AAAACA------------------GTGCATGAGCAAAGGATGCAATGTGAGATGGTCTGAACAGTTTAAAAGAA----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112711784 221 + 115148730 AATAAAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAAGAAATCAGAGGAGA-GAGGTTCATTC----TAAA---GGGAATGGTGGAAACGTCAGTGACAACATACCA---GGG-TGGTTCTTGCAAGATGATGTGGAAGAGAAAAGGTAAGGATTGAGC---AAAACA------------------GTGCATGAGCAAAGCATGCAATGTGAGATGGTCTGAACAGTTTAAAAGAA----- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993749 224 + 190429646 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCATTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTAAGC---GAAAGA------------------GTGCATGACCAAAAGATGCAGTGTGAGATGATCTGAACAGTTTAGAAGAA----- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936524 224 + 189454096 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCATTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTAAGC---GAAAGA------------------GTGCATGACCAAAAGATGCAGTGTGAGATGATCTGAACAGTTTAGAAGAA----- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328262 224 - 25927173 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCATTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTAAGC---GAAAGA------------------GTGCATGACCAAAAGATGCAATGTGAGATGATCTGAACAGTTTAGAAGAA----- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357652 224 + 4669795 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCATTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTAAGC---GAAAGA------------------GTGCATGAGCAAAAGATGCAATGTGAGATGATCTGAACAGTTTAGAAGAA----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315639 217 + 135778131 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATC-------A-GAGGTTCATTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGAAAGAGAAAAGGTAAAGATTGAGT---GAAAGA------------------GTGCATGAGCAAAAGATGCAATGTGAGATGGTCTGAACAGTTTAGAAGAA----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768299 224 - 2847728 AATACAACGCAGTAAGTGTGGGA-------AAGA---TTAAAATGCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGTTCACTC----TAAG---GGGAATGGTGGAAATGTCAGTGAGAACATGCCATCTGGG-TGGTTTTTGTAAGATGATGTGGAAGAGAAAAGGTAAAGATTAAGC---GAAAGA------------------GTGCATGAGCAAAAGATGCAATGTGAGATGATCTGAACAGTTTAGAAGAA----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884087 224 + 2368649 AATACGACGCAGTAAGTGTGGGA-------AAGA---TTCAAGTCCATGTTGTG--------------ATATACCACAGGAAATCAGAGGAGA-GAGGGTCATTC----TAAG---GGGAATGGTGGAAACGGCAGTGAGAACATGCCATCTGGG-TGGTTCTTGCAAGATGATGTGGAAGAGAAAAGGTAACGATTGAGC---GAAAGA------------------GTGCATGAGCAAAAGATGCAATGTGAGATGGTCTGAACAATTTATAAGAA----- i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16952819 244 - 59632846 AATGTAAGGCAGTCAGTGTAAGA-------AAGAAAGATAAAAGTCATGCTGTGTTACAGGCAGGGCAACATGTGGTGGAAGATCAAAGGAGG-GAGGTTAATTCTGAATAAA---GAGAATGATGGAAACTTCAGTGAGAACATGCCATCTGAG-GGGATATTGCAAGGTGATGTGAAAGAAAAGAGATAAAAGGAGAAC---AAGGGA------------------GAACATGAGCAAAGGATGAGTTGTGA-ATTTTCTTTACATTTTAAGAAAA----- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1445039 270 - 2520184 aatgtaaggaagtaagggtgaaaaaaaagcaaga---ttaaaatgcatgctatgaaacagaaagagcaatgtgccatgggagataaaaacaggtggagttaattc----tgagtaagggaatggcagaaacttccctgagaagttgccatctgagttggctcttgaGACCTGGTACGGACG-GCAGGCACAAAGGACGAGCTGTGAAATAGGCTTAACCCTTATTTATGTACATAAGCAAAGGGAGCACAGAGCA-----CAGAAGGATTTAGAGAGAAAGAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=276774.000000 s hg38.chr4_KI270789v1_alt 114465 46 + 205944 TAACCTGggccaggcacggtggctcactcctgtaatcccagcactt s panTro5.chr4 192901864 46 + 194502333 TAACCTGggccaggcacggtggctcacgcctgtaatcccagcattt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785537 46 + 195804263 taacctgggccaggcacggtggctcacgcctgtaatcccagcattt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822808 46 + 4876863 TAACCTGggccaggcacggtggctcacgcctgtaatcccagcactt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712005 46 + 115148730 TAACCTGggccgggcacggtggctcacgcctgtaatcccaacactt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188993973 46 + 190429646 TAACCTGggccgggcacggtggctcatgcctgtaatcccagcactt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936748 46 + 189454096 TAACCTGggccgggcacagtggctcatgcctgtaatcccagcactt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328486 46 - 25927173 TAACCTGggctgggcacggtggctcatgcctgtaatcccagcactt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357876 46 + 4669795 TAACCTGggccgggcacggtggctcacgcctgtaatcccagcactt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315856 46 + 135778131 TAACCTGggtcaggcacggtggctcacgcctgtaatcccagcactt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768523 46 - 2847728 TAACCTGggccgggcacggtggctcacgcctgtaatcccagcactt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884311 46 + 2368649 TAACCTGggccgggcacggtggctcacgcctgtaatcccagcactt i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1445309 32 - 2520184 ------GGATC--------TGGTCCTTGAAAATAAGCCCAGGACTT i dasNov3.JH570353 C 0 I 563 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e canFam3.chr16 16953063 0 - 59632846 C e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=227686.000000 s hg38.chr4_KI270789v1_alt 114511 51 + 205944 tgggaagccaaggcgggtggatcccgaggtcaggagttcgagaccatcctg s panTro5.chr4 192901910 51 + 194502333 tgggaagccaaggcgggtggatcccgaggtcaggagttcgagaccatcctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785583 51 + 195804263 tgggaagccaaggcgggtggatcccgaggtcaggagttcgagaccatcctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822854 51 + 4876863 tgggaagccaaggcgggtggatcccgaggtcaggagttcgagaccatcctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712051 51 + 115148730 tgggaagccaagacaggtggatcacgaggtcacgagttcaagaccatcctg i nomLeu3.chr7b C 0 I 106 s rheMac8.chr5 188994019 48 + 190429646 tgggaggtcgaggtgggcagatcacaaggtcaga---tcgagaccatcctg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936794 48 + 189454096 tgggaggtcgaggtgggcagatcacaaggtcaga---tcgagaccatcctg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328532 48 - 25927173 tgggaggtcgaggtgggcagatcacaaggtcaca---tcgagaccatcctg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357922 48 + 4669795 tgggaggtcgaggtgggcagatcacaaggtcaga---tcgagaccaccctg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315902 48 + 135778131 cgggaggttgaggtgggcagatcatgaggtcaga---tcgagaccatcctg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768569 48 - 2847728 tgggaggttgaggtgggcagatcacaaggtcaga---ttgagaccaccctg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884357 48 + 2368649 tgggaggtcgaggtgggcagatcacgaagtcaga---ttgagaccaccctg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e canFam3.chr16 16953063 0 - 59632846 C e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=343929.000000 s hg38.chr4_KI270789v1_alt 114562 99 + 205944 gctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgtgtgcttgtagtcccagctacttgggaggctgaggcag s panTro5.chr4 192901961 99 + 194502333 gctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgcgtgcttgtagtcccagctacttgggaggctgaggcag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785634 99 + 195804263 gctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgcgtgcttgtagtcccagctacttgggaggctgaggcag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3822905 99 + 4876863 gctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggtgcgtgcttgtagtcccagctacttaggaggccgaggcag i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 188994067 74 + 190429646 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaaattaaccgggcgtggtggcacgtgcctgtagtc------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936842 74 + 189454096 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaaattaaccgggcgtggtggcacgtgcctgtagtc------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328580 74 - 25927173 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaaattaaccgggcgtggtggcacgtgcctgtagtc------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3357970 74 + 4669795 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaaattaaccgggtgtggtggcgcgtgcctgtagtc------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134315950 99 + 135778131 gccaacatggtgacacctcttctgtactaaaaatacaaaaaattagccgggcgtggtggcgcatccctgtagtcccagctgctcaggaggctgaggcaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768617 74 - 2847728 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaaattaaccgagcatggtggcgcgtgcctgtagtc------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884405 99 + 2368649 gccaacatggtgaaaccccgtctgtactaaaaatacaaaaagttagccaggcgtggtggcacgtgcctgtagtcccagctactcaggaggctgaggcag i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e canFam3.chr16 16953063 0 - 59632846 C e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e nomLeu3.chr7b 112712102 106 + 115148730 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=463132.000000 s hg38.chr4_KI270789v1_alt 114661 114 + 205944 gagaa---------------------tcgcttgaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagactgactccctctc---------------------------------aaaagaaaaaaaaaaaaaaa--------GC s panTro5.chr4 192902060 117 + 194502333 gagaa---------------------tcacttgaacctgggagctggaggttgcagtgagtcgagatcgcgccactgcactccagcctgggtgacagagactgactccctctc---------------------------------aaaagaaaaaaaaaaaaaaa-----aaaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785733 122 + 195804263 gagaa---------------------tcacttgaacctgggagctggaggttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagactgactccctctc---------------------------------aaaaaaaaaaaaaaaaaaaaaaaagaaaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823004 117 + 4876863 gagaa---------------------tcgcttgaacctgggaggtggaggttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagactgactccctctc---------------------------------aaaagaaaaaaaaaaaaaaa-----aaaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712208 112 + 115148730 gagaa---------------------tcgcttgaacccgggaggcggaggttgcagtgagccgagatcgcaccacagcactccagcctgggcgacagagagagactccctctc---------------------------------aaaagaaaaaaaaaaaaaga---------- i nomLeu3.chr7b I 106 C 0 s rheMac8.chr5 188994141 104 + 190429646 --------------------------ccagct--acttgggaggcagaggttgcagtgagccaagatcacaccacagcactccagcctgggtgacagaga--gactccctctc-------------------------------------aaaaaaaaaaaaaaaa-----gaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187936916 104 + 189454096 --------------------------ccagct--acttgggaggcagaggttgcagtgagccaagatcacaccacagcactccagcctgggtgacagaga--gactccctctc-------------------------------------aaaaaaaaaaaaaaaa-----aaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328654 103 - 25927173 --------------------------ccagct--acttgggaggcagaggttgcagtgagccaagatcacaccacagcactccagcctgggtgacagaga--gactccctctc--------------------------------------aaaaaaaaaaaaaaa-----aaaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358044 141 + 4669795 --------------------------ccagct--acttgggaggcagaggttgcaatgagccaagatcacaccacagcactccagcctgggtgacagaga--gactccctctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316049 136 + 135778131 gagaatcgct---tgaacctgtagt-ccagct--actcaggaggcagagattgcagtgagccaagatcacaccacagcactccagcctgggtgacagaaa--gactccctctc---------------------------aaaaaaaaaaaaaaaaaaaaaaaaaa-----aaaGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768691 106 - 2847728 --------------------------ccagct--acttgggaggcagaggttgcagtgagccaagatcacaccacagcactcccgcctgggtgacagaga--gactccctctc-----------------------------------aaaaaaaaaaaaaaaaaa-----aaaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884504 124 + 2368649 gagaat---cgcttgaacctgtagtcccagct--acttgggaggcagaggttgcagtgaaccaagatcacaccacagcactccaacctgggcgacagaga--gactccctctc----------------------------------------aaaaaaaaaaaga-----aaaga i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e canFam3.chr16 16953063 0 - 59632846 C e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=154755.000000 s hg38.chr4_KI270789v1_alt 114775 26 + 205944 AT-AAGCCGAGGGAATGAAAGTACTTT s panTro5.chr4 192902177 26 + 194502333 aT-AAGCCGAGGGAATGAAAGTACTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785855 26 + 195804263 ataaagccgagggAATGAAAG-ACTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823121 26 + 4876863 aT-AAGCCGAGGGAATGAAAGTACTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712320 26 + 115148730 aT-AAGCCGAGGGGATGAAAGTGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994245 26 + 190429646 aT-AAGCCAAGGGAATGAAAGTGCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937020 26 + 189454096 aT-AAGCCAAGGGAATGAAAGTGCTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328757 26 - 25927173 aT-AAGCCAAGGGAATGAAAGTGCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358185 26 + 4669795 at-aaGCCAAGGGAATGAAAGTGCTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316185 26 + 135778131 AT-AAGCCAAGGGAATGAAAGTGCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768797 26 - 2847728 aT-AAGCCAAGGGAATGAAAGTGCTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884628 26 + 2368649 aa-aaGCCAAGGGAATGAAAGTGCTCT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16953063 26 - 59632846 AT-AAGTTCAGGGAATAAAAGTACTCT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17508919 455 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=217222.000000 s hg38.chr4_KI270789v1_alt 114801 30 + 205944 CTGTGGCTGGAGCACAGGATGTCTAGACAG s panTro5.chr4 192902203 30 + 194502333 CTGTGGCTGGAGCACAGGATGTCTAGACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785881 30 + 195804263 CTGTGGCTGGAGCACAGGATGTCTAGACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823147 30 + 4876863 CTGTGGCTGGAGCACAGGATGTCTAGACAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712346 30 + 115148730 CTGTGGCTGGAGCACAGGATGTCTAGACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994271 29 + 190429646 CTGCAGCTGGAGCACAGGATGTCTA-CCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937046 30 + 189454096 CTGCAGCTGGAGCACAGGATGTCTAGACAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328783 30 - 25927173 CTGCAGCTGGAGCACAGGATGTCTAGACAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358211 30 + 4669795 CTGCAGCTGGAGCACAGGATGTCTAGACAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316211 30 + 135778131 GTGTGGCTGGAGCACAGGATGTCTAGACAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768823 30 - 2847728 CTGCAGCTGGAGCACAGGATGTCTAGACAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884654 30 + 2368649 CTGTGGCTGGAGCACAGGATGTCTAGACAG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17509374 30 - 93316391 CTGTGGCTGGAGCACAGAATGTCTAAACAG i micMur3.chr14 I 455 I 903 s canFam3.chr16 16953089 30 - 59632846 CTTGTGCTGGAGTACATAATATTTGGACAG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e dasNov3.JH570353 1445341 563 - 2520184 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=895499.000000 s hg38.chr4_KI270789v1_alt 114831 152 + 205944 AAGAATTTGGAAAGAAACAGAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAAAATAAGGCTACAGTTTTTAATATT-------------------ATTATACTGCAGGCCAT-TGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG s panTro5.chr4 192902233 150 + 194502333 AAGGATTTGGAAAGAAACAG--GATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAAAATAAGGCTACAGTTTTTAATATT-------------------ATTATACTGCAGGCCAT-TGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192785911 150 + 195804263 AAGGATTTGGAAAGAAACAG--GATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAAAATAAGGCTACAGTTTTTAATATT-------------------ATTATACTGCAGGCCAT-TGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823177 152 + 4876863 AAAGATTTGGAAAGAAACAGAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAAAATAAGGCTACAGTTTTTAATATT-------------------ATTATACTGCAGGCCAT-TGAAGATAATGCACTTGTTTTGTGTTGTTTTTGTTTTTCAGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712376 152 + 115148730 AAGGATTTGGAAAGAAACACAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCCTGAAAATAAGGCTACAGTTTTTAATATT-------------------ATTATACTGCAGGCCAT-TGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCGGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994300 171 + 190429646 AAGGATTTGGAAAGAAACATATGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTGGAAAGTAATGCTAGAATTTTTAATATTATTATACTGCAGGCCATTGATTATACCGCAGGCCAT-CGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937076 171 + 189454096 AAGGATTTGGAAAGAAACATAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTGGAAAGTAATGCTAGAATTTTTAATATTATTATACTGCAGGCCATTGATTATACTGCAGGCCAT-CGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328813 171 - 25927173 AAGGATTTGGAAAGAAACAGAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTGGAAAGTAATGCTAGAATTTTTAATATTATTATACTGCAGGCCATTGATTATACTGCAGGCCAT-CGAAGATAATGCACTTGTTTTGTATTGTTTTTGTTTTTCAGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358241 171 + 4669795 AAGGATTTGGAAAGAAACATAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTGGAAAGTAATGCTAGAATTTTTAATATTATTATACTGCAGGCCATTGATTATACTGCAGGCCAT-CGAAGATAATGCACTTGCTTTGTATTGTTTTTGTTTTTCAGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316241 171 + 135778131 AGGGATTTGGAAAGAAACATAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAAAATAAGGCTAGAATTTTTAATATTATTATACTTCAAGCCATTGATTATACTGCAGGCCAT-CGAAGATAATGCCCTTGTTTTGTATTGTTTTTATTTTTCGGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2768853 171 - 2847728 AAGGATTTGGAAAGAAACATAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTGGAAAGTAATGCTAGAATTTTTAATATTATTATACTGCAGGCCATTGATTATACTGCAGGCCAT-CGAAGATAATGCACTTGCTTTGTATTGTTTTTGTTTTTCAGAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884684 149 + 2368649 AAGGATTTGGAAGGAAACATAGGATACTAGATTTGGAACAGATCATTCAGGTCCTCAAGACCTTGAATATAACGCTAGAATTGTTAAT----------------------ATTATACTGCAGGCCAT-CGAAGATAACGCACTTGTTTTGTATTGTTTTTGTTTTTCGGAAG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16953119 142 - 59632846 AAGGATCTGGAAAGAAACTTAGG----TAGATTTATAGTGGATCACGCAAGACCACAAGACCTTGAAAATAAGGCTAGAAATTTCAAC----------------------AATATAGTACCAGCAATACAAAGCTAATG---TGGTTTTGTA-TGTGTGTGTATGCTGGAAG i canFam3.chr16 C 0 I 122 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17509404 903 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=384822.000000 s hg38.chr4_KI270789v1_alt 114983 72 + 205944 ACAGAGTATTAACTTTTTTTTCAGGTTGTAGAattcatcaattccataaccatttttgaatgagtattac-ag s panTro5.chr4 192902383 72 + 194502333 ACAGAGTATTAACTTTTTTTTCAGGTTGTAGAattcatcaattccataaccatttttgaatgagtattat-ag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786061 72 + 195804263 ACAGAGTATTAACTTTTTTTTCAGGTTGTAGAattcatcaattccataaccatttttgaatgagtattat-ag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823329 72 + 4876863 ACAGAGTATTAACTTTTTTTTCAGGTTATAGAattcatcaattccataaccatttttgaacgagtattat-ag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712528 72 + 115148730 ACAGAGTATTAACTTTTTTTTCAGGTTGTAGAattcatcaattccataaccatttttgaaaaagtattat-ag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994471 72 + 190429646 ACAGAGTATTAAC-TTTTTTTCAGATTGTAGGattcatcaattccataaccatttttgaatgagtattataag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937247 72 + 189454096 ACAGAGTATTAAC-TTTTTTTCAGATTGTAGGATTCATCAATTCCATAACCATTTTTGAATGAGTATTATAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24328984 72 - 25927173 ACAGAGTATTAAC-TTTTTTTCAGATTGTAGGattcatcaattccataaccatttttgaatgagtattataag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358412 72 + 4669795 ACAGAGTATTAAC-TTTTTTTCAGATTGTAGGattcatcaattccataaccatttttgaatgagtattataag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316412 71 + 135778131 ACACAGTATTAAC--TTTTTTCAGGTTGTAGGattcatcagttccataaccatttttgaatgagtattataag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769024 72 - 2847728 ACAGAGTATTAAC-TTTTTTTCAGATTGTAGGattcatcaattccataaccatttttgaatgagtattataag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884833 72 + 2368649 ACAGAGTATTAAC-TTTTTTTCAGGTTGTAGAATTCATCAATTCCATAACCACTTTTGAATGAGTATTATAAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17509404 903 - 93316391 I e dasNov3.JH570353 1445341 563 - 2520184 I e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=476412.000000 s hg38.chr4_KI270789v1_alt 115055 75 + 205944 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtctt-acattctgtgggaggagacaagca s panTro5.chr4 192902455 75 + 194502333 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtctt-acattctgtgggaggagacaagca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786133 75 + 195804263 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtctt-acattctgtgggaggagacaagca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823401 75 + 4876863 gtcaaggacttttctaagaagatggatatggtctcttctgtcatgggtctt-acattctgtgggaggagacaagca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712600 75 + 115148730 gtcaaggatttttctaaaaagatggatatgatctcttctgtcatgggtctt-acattctgtgggaggagacaagca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994543 76 + 190429646 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtcttaacattctgtgggaggagacaagca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937319 76 + 189454096 GTCAAGGACTTTTCTAAAAAGATGGATATGgtctcttctgtcatgggtcttaacattctgtgggaggagacaagca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329056 76 - 25927173 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtcttaacattctgtgggaggagacaagca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358484 76 + 4669795 gtcaaggacttttctaaaaagatagatatggtctcttctgtcatgggtcttaacattctgtgggaggagacaagca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316483 75 + 135778131 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtctt-acattctgtgggaggagacaagca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769096 76 - 2847728 gtcaaggacttttctaaaaagatggatatggtctcttctgtcatgggtcttaacattctgtgggaggagacaagca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884905 75 + 2368649 GTCAAGGACTTTTCTGAAAAGATGTTTCTGgtctcttctgtcatgggtctt-acattctgtgggaggagacaagca i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1445904 65 - 2520184 GTCAGGGGCTTTTCTAAGAAAAAAG----------TTCTCTCATGGATGTT-ACCCTCTGTGGAAGGGGAAAAACA i dasNov3.JH570353 I 563 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17509404 903 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11231772 24 - 11315646 I a score=1412494.000000 s hg38.chr4_KI270789v1_alt 115130 239 + 205944 -----ataactacatacaatgagcacaataattgaagtgattatgtgggaattaaaggg--gtgggct-atTGACAACTTCAGACACCATGGTAATTAATGGCCTT---------CGA--------TTTGTAACAGGAGCTGAGATTCCTGACTTCACAGATCCCTGAGGAGATGTTTACTAAAGGGAATCTTCTGGTCACTGTTACCTTCCTCCGTACTT-AC-CTGCCTCATGGAGTAAGCATGAC-AAAATTCTTGATTACATA s panTro5.chr4 192902530 239 + 194502333 -----ataactacatacaatgagcacaataattgaagtgattatgtgggaattaaaggg--gtgggct-atTGACAACTTCAGACACCATGGTAATTAATGGCCTT---------CTA--------TTTGTAACAGGAGCTGAGATTCCTGACTTCACAGATCCCTGAGGAGATGTTTACTAAAGGGAATCTTCTGGTCACTGTTACCTTCCTCCGTACTT-AC-CTGCCTCATGGAGTAAGCATGAC-AAAATTCTTGATTACATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786208 239 + 195804263 -----ataactacatacaatgagcacaataattgaagtgattatgtgggaattaaaggg--gtgggct-atTGACAACTTCAGACACCATGGTAATTAATGGCCTT---------CTA--------TTTGTAACAGGAGCTGAGATTCCTGACTTCACAGATCCCTGAGGAGATGTTTACTAAAGGGAATCTTCTGGTCACTGTTACCTTCCTCCGTACTT-GC-CTGCCTCATGGAGTAAGCATGAC-AAAATTCTTGATTACATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823476 239 + 4876863 -----ataactacatacaatgagcacagtaATTGACGTGATTATGTGGGAATTAAAGGG--GTGGGCT-ACTGACAACTTCAGACACCATGGTAATTAATGGCCTT---------TGA--------TTTGTAACAGGAGCTGAGATTCCTGACTTCACAGATCCCTAAGGAGATGTTTACTAAAGGGAATCTTCTGGCCACTGTTACCTTCCTCCGTACTT-AC-CTGCCTCATGGAGTAAGCATGAC-AAAATTCTTGATTACATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712675 239 + 115148730 -----ataactacatataatgagcacaataATTGAAATGATTATATGAGAATTAAAGGG--GTGGACT-ATTGACAACTTCAGACACCATGGTAATTAATGGCCTT---------TGA--------GTCGTCACAGGAGCTGAGATTCCTGACTTCACAGATCCCTGAGGAGATGTTTACTAAAGGGAATCTTCTGGCCACTGTTACCTTCCTCTGTACTT-AC-CTGCCTCATGGAGTAAGAATGAG-TAAATTCTTGATTACACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994619 238 + 190429646 -----gtaactacatacaatGTGCGCAACAATTGAAGTGAT--TATGAGAATTAAAGGG--GTGGGCT-ATTGGCAACTTCAGACACCATGGTAATCAATGGCCTT---------TGA--------TTCGTAACACGGGCTGAGATTCCTGTCTTCACAGATCCCTGAGGAGATGTCTACTAAAGGGAATCTTCTAGCCACTGATACCTTCTTCTGTACTT-ACCCTGCCTCATGGAGTAAGAATGAC-TAAATTATTGATTACATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937395 238 + 189454096 -----gtaactacataCAATGCGCACAACAATTGAAGTGAT--TATGAGAATTAAAGGG--GTGGGCT-ATTGGCAACTTCAGACACCATGGTCATCAATGGCCTT---------TGA--------TTCGTAACACGGGCTGAGATTCCTGTCTTCACAGATCCCTGAGGAGATGTCTACTAAAGGGAATCTTCTAGCCACTGATACCTTCTTCTGTACTT-ACCCTGCCTCATGGAGTAAGAATGAC-TAAATTATTGATTACATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329132 238 - 25927173 -----gtaactacgtacaatgcgcgcaacaattgaagtgat--tatgagaattaaaggg--gtgggct-attggCAACTTCAGACACCATGGTCATCAGTGGCCTT---------TGA--------TTCGTAACACGGGCTGAGATTCCTGTCTTCACAGATCCCTGAGGAGATGTCTACTAAAGGGAATCTTCTAGCCACTGATACCTTCTTCTGTACTT-ACCCTGCCTCATGGAGTAAGAATGAC-TAAATTATTGATTACATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358560 238 + 4669795 -----gtaactacatacaatgagcacaacaattgaagtgat--tatgagaattaaagag--gtgggct-attggCAACTTCAGACACCATGGTCATCAATGGCCTT---------TGA--------TTCGTAACACGAGCTGAGATTCCTGTCTTCACAGATCCCTGAGGAGATGTCTACTAAAGGGAATCTTCTGGCCACTGTTACCTTCTTCTGTACTT-ACCCTGCCTCATGGAGTAAGAATGAC-TAACTTATTGATTACATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316558 240 + 135778131 -----gtaactacatacaatgagcacaacaATTGAAGTGATTATATGAGAATTAAAGGG--GTGGGCT-TCTGGCAACTTCAGACACCATGGTCATCAATGGCCTT---------TGA--------TTCGTAACACGAGCTAAGATTCCTGTTTTCACAGATCCCTGAGGAGATGTCTACTAAGGGGAATCTTGTGGCCACTGTTACCTTCTTCCGTACTT-ACCCTGCTTCATGGAGTAAGAATGAT-TAAATTATTGATTACATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769172 238 - 2847728 -----gtaactacgtacaatgagcacaacaattgaagtgat--tatgagaattaaAGGG--CTGGGCT-ATTGGCAACTTCAGACACCATGGTCATCAATGGCCTT---------TGA--------TTCGTAACACGAGCTGAGATTCCTGTCTTCACAGATCTCTGAGGAGATGTCTACTAAAGGGAATCTTCTGGCCACTGTTACCTTCTTCTGTACTT-ACTCTGCCTCATGGAGTAAGAATGAC-TAACTTATTGATTACATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 884980 240 + 2368649 -----gtaactacatacaatgggcacaacaACTGAAGTGATTATACGAGAATTAAAGGG--GTGGGCT-ACTGGCAGCTTCAGGCACCATGGTCATCAGTGGCCTT---------TGA--------TTGGTAACACGAGCTGAGATTCCTGTCTTCACAGATCCCGGAGGAGATGTCTACTAAAGGGAATCTTCTGGCCACTGTTACCTTCTTCCGTACTT-ACCCTGCCTCATGGAGTAAGAATGAC-TACATTATTGATTACATA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11231796 249 - 11315646 -----ATAAATACATAAAGTG-GAACAATAATTATAGTGATAATAGGACAGTGATGGGG--ATGGGGTCACAAGCAACTTTAGACACAGTGAGTAAAAAAGGTGCT---------GGGGAAGGGACTTACTACCAGGAGCTTAGCGTCCTACCTTCAGGGACCTATGAGGAGATGTCTGCTGGAGTTAATCTTCTGGCCATTAGTATCTGCTTCCACAGTG-ACCCTGCCTTGTGGGGTAAGAATGACTTAAACGACTGTAGAGACA i otoGar3.GL873580 I 24 C 0 s dasNov3.JH570353 1445969 245 - 2520184 AATGCTTGGGTTTAAAAAATATGAACA---------GTGGT-ATATGAGAGCCATGGGTACGAGGGGA-AGAGGCAACGTTTGACACAGTGGTTGGAAGAGGCCTTTGGCAAAGATGA--------TTATTAACAGTGGCTTCATTTCCAAACATCATGGATCCATGAAGAGATGGCTACTAAAGTAAGTCTTCTGGCCTTTATTATCTTCTTCCCTATTTAACCCTCGCTC---GAGTAAGGATGGCTTAAATTATGGGTGAGATT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17509404 903 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606496 179 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I a score=431441.000000 s hg38.chr4_KI270789v1_alt 115369 71 + 205944 GGGAAAATCACATCTTCGATTAATACTTTCCTGTTTTT--ATTCTTCATTACTACTTGCATGATA-TTCACATA s panTro5.chr4 192902769 71 + 194502333 GGGAAAATCACATCTTCGATTAATACTTTCCTGTTTTT--ATTCTTCGTTACTACTTGCATGATA-TTCACATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786447 71 + 195804263 GGGAAAATCACATCTTCGATTAATACTTTCCTGTTTTT--ATTCTTCATTACTACTTGCATGATA-TTCACATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823715 71 + 4876863 GGGAAAATCACATCTTCGATTAACACTTTCCTGTTGTT--ATTCTTCATTACAACTTGCATGATA-TTCACATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712914 71 + 115148730 GGGAAAATCACATCTTCGATTAATACTTTCCTGTTTTT--ATTCTTCATTACAACTTGCATGATA-TTCACATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994857 71 + 190429646 GGGAAAATCACATCTTCGATTGATACTTTCCTGTTTTT--ATTCTTCATCACAACCTGCATGATA-TTCACATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937633 71 + 189454096 GGGAAAATCACATCTTCGATTGATACTTTCCTGTTTTT--ATTCTGCATCGCAACCTGCATGATA-TTCACATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329370 71 - 25927173 GGGAAAATCACATCTTCGATGGATACTTTCCTGTTTTT--ATTCTTCATCGCAACCTGCATGATA-TTCACATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358798 71 + 4669795 GGGAAAATCACATCTTCGATTGATACTTTCCTGTTTTT--ATTCTTCATCGCAACCTGCATGATA-TTCACATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316798 73 + 135778131 GGGAAAATCACATCTTCAATTGTTACTTTCCTGTTTTTTAATTCTTCATCGCAGCCTGCATGATA-TTCACATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769410 71 - 2847728 GGGAAAATCACATCTTCGATTGATACTTTTCTGTTTTT--ATTCTTCATCGCAACCTGCATGATA-TTCACATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885220 71 + 2368649 GGGAAAATCACATCTTCGATGGATACTTTCCTGTTTTT--ATTCTTCATCGCAACCTGCATGATA-TTCACATC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11232045 69 - 11315646 GGGAAAATGACATATTATCTTGATACCTTCC--TTTCT--CTTCTTTGGCCCAGCCTGCCTCACG-TCCTCATA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86606675 61 - 129401213 GAGTGAATAATCTCTTTCCTTTTTAATTTCCTGGTTTC--CTTTCTGAC-----CTAGCCTGA-----CACAT- i mm10.chr8 I 179 C 0 s dasNov3.JH570353 1446214 72 - 2520184 GGAAACGTCACAACTCATCACTCCCCCTTCCTGTCTCT--CTTCTTTCATCAAGCCTGTAAGAAAGTTCACATA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3949563 1197 + 3993831 I e micMur3.chr14 17509404 903 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I a score=151583.000000 s hg38.chr4_KI270789v1_alt 115440 26 + 205944 ATCTTTTCTCTTCTCCTGCTTCCTCC s panTro5.chr4 192902840 26 + 194502333 ATCTTTTCTCTTCTCCTGCTTCCTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786518 26 + 195804263 ATCTTTTCTCTTCTCCTGCTTCCTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823786 23 + 4876863 ATCTTTTGTCTTCTC---CTTCCTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112712985 23 + 115148730 ATCTTTTCTCTTCTG---CTTCCTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994928 21 + 190429646 ATCTT-----TTCTCCTGCTTCCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937704 21 + 189454096 ATCTT-----TTCTCCTGCTTCCTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329441 21 - 25927173 ATCTT-----TTCTCCTGCTTCCTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358869 21 + 4669795 ATCTT-----TTCTCCTGCTTCCTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316871 21 + 135778131 ATCTT-----TTCTCCTGCTTCCTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769481 21 - 2847728 ATCTT-----TTCTCCTGCTTCCTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885291 21 + 2368649 ATCTT-----TTCTCCTGCTTCCTCT i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17510307 26 - 93316391 ATCTTTTCTCTTCTCCTGTTTCCTCC i micMur3.chr14 I 903 I 824 s proCoq1.NW_012145301v1 3950760 26 + 3993831 ATCTTTTCTCTTCTCCTGCTTCCTCC i proCoq1.NW_012145301v1 I 1197 I 777 s otoGar3.GL873580 11232114 26 - 11315646 ACCTTTTCTCATCCCCTGCTTTCTCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86606736 22 - 129401213 -TTTTTT---TCCTTTCACTTCTCCT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1446286 17 - 2520184 ---ATTGCTCTGCTCCTGCT------ i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e canFam3.chr16 16953261 122 - 59632846 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I a score=1277930.000000 s hg38.chr4_KI270789v1_alt 115466 234 + 205944 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTGTTTGTATCTGAGAAC-GAGTTAAGGCTTTACACTGGTAGTAAGTTTAAGTCATGCCAAAAA-GGGGTAGAATACCTGATTCTCCTAGTTTCAAGACAAGCCAGGT---tttttttgtttgtttgttttttAAAAAAGCAGAAACTTTCATTGC--TCTCTCTC--ATCTGAAA-C-TAGATGAGGCTATCTACTCTGAGTGGC s panTro5.chr4 192902866 230 + 194502333 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTGTTTGTATCTGAGAAC-GAGTTAAGGCTTTACACTGGTAGTAAGTTAAAGTCATGCCAAAAA-GGGGTAGAATACCTGATTCTCTTAGTTTCAAGACAAGCCAGGT---TTTTTTTGTTTGTTT----TTTAAAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATCTGAAA-C-TAGATGACGCTGTCTACTCTGAGTGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786544 230 + 195804263 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTGTTTGTATCTGAGAAC-GAGTTAAGGCTTTACACTGGTAGTAAGTTAAAGTCATGCCAAAAA-GGGGTAGAATACCTGATTCTCTTAGTTTCAAGACAAGCCAGGT---TTTTTTTGTTTGTTT----TTTAAAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATCTGAAA-G-TAGATGACGCTGTCTACTCTGAGTGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3823809 229 + 4876863 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTGTTTGTATCTGAGAAC-GAGTTAAGGCTTTACACTGGTAGTAAGTTTAAGTCATGCCAAAAA-GGGGTAGAATACCTGATTCTCCTAGTTTCAAGACAAGCCAGG----TTTTTTTGTTTGTTT----TTTAAAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATCTGAAA-C-TAGATGAGGCTATCTACTCTGAGTGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713008 233 + 115148730 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTGTTTGTATCTGAGAAC-GAGTTAAGGCTTTACACTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTAGAATGCCTGATTCTCCTAGTCTCAAGAGAAGCCGGgtttgtttgtttgtttgttt----ttttACAAAGCAGCAACTTTCATTGC--TGTCTCTG--ATCTGAAA-C-TAGATGAGGCCATCTACTCTGAgtggc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188994949 223 + 190429646 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCAGAGCTTGTTTGTATCCAAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTAGAATGCCCAATTCTCCTAGTCTCAAGACAAGCCG------TTTATTTATTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATAGGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937725 223 + 189454096 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCAGAGCTTGTTTGTATCCAAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTAGAATGCCCAATTCTCCTAGTCTCAAGACAAGCCG------TTTATTTATTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATAGGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329462 223 - 25927173 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCAGAGCTTGTTTGTATCCAAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTAGAATGCCCAATTCTCCTAGTCTCAAGACAAGCCG------TTTATTTATTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATAGGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3358890 223 + 4669795 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCAGAGCTTGTTTGTAACCAAGAAC-GAGGTAAGTCTTTACCTTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTAGAATGCCCGATTCTCCTAGTCTCAAGACAAGCCG------TTTATTTATTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATGTGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134316892 223 + 135778131 ACGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCCGAGCTTGTTTGTATCCGAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCTGAAAA-GGAGTAGAATGCCTGATTCTCCTAGTCTCAAGACAAGCCA------TTTATTTGTTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATATGAAA-C-TAGATGAGGTCATCTACTCTGAGTGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769502 224 - 2847728 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTCAGAGCTTGTTTGTATCCAAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCCGAAAAGGGGGTAGAATGCCCGATTCTCCTACTCTCAAGACAAGCCG------TTTATTTATTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TGTCTCTG--ATATGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885312 223 + 2368649 GTGCAATAAGCTGCTCAGGCAGCCTTTGCTCTTAAGAGCTTCTTTGTATCCAAGAAC-GAGGTAAGTCTTTACATTGGTAGTAAGTTTAAGTCATGCCGAAAA-GGGGTGGAACGCCTGATTCTCCTAGTCTCAAGACAAGGTG------TTTATTTGTTTCTTT--------AAAAAGCAGAAACTTTCATTGC--TCTCTCTG--ATATGAAA-C-TAGATGAGGCCATCTACTCTGAGTGGC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11232140 159 - 11315646 --------------------GTCCTTTGCTCTTGGGAG----TTTCTAACTGAGGAT-GAG------------------------------------TAAGGA-AGGGTAGGATACTTGAGTC---TAGTCTCCAGACAAGCTG------GGTCTTTG-----------GAAAAGGAAGCAGAAG-TATTATGGC--TGTCTCTGTCATCTGCAATC-TGGAGGGAAGTGTGTACCCTGAGCAGC i otoGar3.GL873580 C 0 I 11 s mm10.chr8 86606758 210 - 129401213 GTGTAGTAAGATTCTCAGA--------GCATAGCATAGAGAGTTTGCATGTAAGAAA-TAGATAAGGTCTAACTTCAG-GGAAAATTTAATTAAAATTGCAAA-AGTATAGAATGTCTGAACC----AAATCCAAAAGTCACCA------TAATTTCA-----------AAAATGAAAGCAGAAACTGTTATTACAGTTTCACTG--ATGTGGACTC-TGAGAGGGGCTGTCTATTCTCAGTAGC i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1446303 206 - 2520184 -TGCAACAAACTACTCGGA-ACTCTTTGTCCTTGGGAA----GTTGTGGCTGTGAATGGAGGTGTAGCCTTAAAGT-----TAAGTTTAATTTATGCTGGAAA-ATGGTAGGAT-----CTTACCGTAGTTTCAAGTCAAGCTG-------------GATTTTTC----AAAAATATAGTGGAAAAGATTATTGC--TACCTCAG--CTCTGCAG-CTTAAGAGAAGCTGCCTATTTTTAGTGGC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 115700 1 + 205944 C s panTro5.chr4 192903096 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786774 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824038 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713241 1 + 115148730 c i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188995172 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937948 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329685 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3359113 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134317115 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769726 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885535 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86606968 1 - 129401213 C i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1446509 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=155846.000000 s hg38.chr4_KI270789v1_alt 115701 26 + 205944 AGGTCTTCTGTAATTtgtaactgaaa s panTro5.chr4 192903097 26 + 194502333 AGGTCTTCTGTAATTtgtaactgaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786775 26 + 195804263 AGGTCTTCTGTAATTtgtaactgaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824039 26 + 4876863 AGGTCTTCTGTAATTtgtaactgaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713242 26 + 115148730 aggtcttctgtaatttgtaactgaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188995173 26 + 190429646 AGGTCTTCTATAATTtgtaattgaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937949 26 + 189454096 AGGTCTTCTATAATTtgtaattgaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329686 26 - 25927173 AGGTGTTCTATAATTtgtaattgaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3359114 26 + 4669795 AGGTCTTCTATAATTTGTAATAGAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134317116 26 + 135778131 AGGTCTTCTATAATTtgtaattgaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769727 26 - 2847728 AGGTCTTCTATAATTtgtaattgaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885536 26 + 2368649 AGGTCTTCTGTAATTtgtaactgaaa i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86606969 26 - 129401213 AACCCTTCTGTGTTTTGAGAAAGAAA i mm10.chr8 C 0 I 732 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=818042.000000 s hg38.chr4_KI270789v1_alt 115727 150 + 205944 tgcaggttacttgctcactgcacgtacagttcagttaacgag--ggaaatctgatccaaaataagtgaatttattccgaagttagcttgggggaaggggcacaaagcatcccgcctttgaatgtgccgcttctcctctgttgcaaaaagtgg s panTro5.chr4 192903123 152 + 194502333 tgcaggttacttgctcactgcacgtacagttcagttaacgagagggaaatctgatccaaaataagtgaatttattccgaagttagcttgggggaaggggcacaaagcatcccgcctttaaatgtgccgcttctgctctgttgcaaaaagtgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786801 152 + 195804263 tgcaggttacttgctcactgcacgtacagttcagttaacgagagggaaatctgatccaaaataagtgaatttattccgaagttagcttgggggaaggggcacaaagcatcccgcctttaaatgtgctgcttctgctctgttgcaaaaagtgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824065 152 + 4876863 tgcaggttacttgctcactgcacgtacagtccaattaacaagagggaaatctgatccaaaataagtgaattgattccaaagttagcttgggggaaggggcacaaagcatcccgcctttgaatgtgccgcttctcctctgttgcaaaaagtgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713268 152 + 115148730 tgcaggttacttgctcactgcacatacagtccaattaccaagagggaaatctgatccaaaataagtgaatttattccgaagctagcttgaggaaagggacacaaagcatcccgcctttgaatgtgctgcttctcccctgttgcaaaaagtgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188995199 150 + 190429646 tgcacgttacttgctcactgcacgtacagtccagttcacaagagggatatctgatccaaaataagtgaatttattctgaagctagcttgggggaagggg--caaagcatcctgcccttgaatgtgccgcttctcctctgttacaaaaagtgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187937975 150 + 189454096 tgcacgttacttgctcactgcacgtacagtccagttcacaagagggatatctgatccaaaataagtgaatttattctgaagctagcttgggggaagggg--caaagcatcctgcccttgaatgtgccgcttctcctctgttacaaaaagtgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24329712 150 - 25927173 tgaacgttacttgctcactgcacgtacagtccagttcacaagagggatatctgatccaaaataagtgaatttattctgaagctagcttgggggaagggg--caaagcatcctgcccttgaatgtgccgcttctcctctgttacaaaaagtgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3359140 150 + 4669795 TGCACGTTACTTGCTCACTGCACGTACAGTCCAGTTCACAAGAGGGATATCTGATCCAAAATAAGTGAATTTATTCTGAAGTTAGCTTGGGGGAAGGGG--CAAAGCATCCTGCCCTTGAATGTGCCGCTTCTCCTCTGTTACAAAAAGTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134317142 150 + 135778131 tgcacgttacttgctcactgcacgtacagtccagttaacaatagggatatctgatccaaaataagtgagtttattccgaagctaacttgagggaagggg--caaagcatcctgcccttgaatgtgccgcttctcctctgttacataaagtgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2769753 150 - 2847728 tgcacgttacctgctcactgcacgtacagtccagttcacaagagggatatctgacccaaaataagtgaatttattctgaagctagcttgggggaagggg--caaagcatcctgcccttgaatgtgccgcttctcctctgttacaaaaagtgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 885562 151 + 2368649 tgcacgttacttgctcagtgcacatacagtccagttaac-agagggatatctgatccaaaataagtgaatttattccgaagctagcttgggggaaggggcacaaagcatcctgcctttgaatgtgcagcttctcctctattacaaaaagtgg i colAng1.NW_012116221v1 C 0 I 1679 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=283776.000000 s hg38.chr4_KI270789v1_alt 115877 65 + 205944 gcattttcatagggtaagggaggacatgagcaagggcaggggtcccactgcttctggtcagttac s panTro5.chr4 192903275 65 + 194502333 gcattttcatagggtaagggaggaaatgagcaagggcaggggtcccactgcttctggtcagttac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192786953 65 + 195804263 gcattttcatagggtaagggaggaaatgagcaagggcaggggtcccactgcttctggtcagttac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824217 65 + 4876863 gcattttcatagggtaagggaggaaatgagcaagggcaggggtcccgctgcttctggtcagttac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713420 65 + 115148730 gcattttcataaggtaagggaggaaatgagcaagggcaggggtcccactgcttctggtcagttac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188995349 63 + 190429646 gcattttcatatggtaagggaggaaacgagcaagggca-gggtccccttgc-tctggtcagttac i rheMac8.chr5 C 0 I 1673 s macFas5.chr5 187938125 63 + 189454096 gcattttcatatggtaagggaggaaacgagcaagggca-gggtccccctgc-tctggtcagttac i macFas5.chr5 C 0 I 1673 s macNem1.NW_012013133v1 24329862 63 - 25927173 gcattttCATATGGTAAGGGAGGAAATGAGCAAGGGCA-GGGTCCCCCTGC-TCTGGTCAGTTAC i macNem1.NW_012013133v1 C 0 I 1673 s cerAty1.NW_012001672v1 3359290 63 + 4669795 GCATTTTCATATGGTAAGGGAGGAAACGAGCAAGGGCA-GGGTCCCCCTGC-TCTGGTCAGTTAC i cerAty1.NW_012001672v1 C 0 I 1659 s chlSab2.chr7 134317292 63 + 135778131 gcattttcatatggtaagggaggaaacaagcaagggca-gggtccccctgc-tctggtcagttac i chlSab2.chr7 C 0 I 1652 s manLeu1.NW_012102221v1 2769903 63 - 2847728 gcattttcatatggtaagggaggaaatgagcaagggca-gcgtccccctgc-tctggtcagttac i manLeu1.NW_012102221v1 C 0 I 1716 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e colAng1.NW_012116221v1 885713 1679 + 2368649 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=2288935.000000 s hg38.chr4_KI270789v1_alt 115942 449 + 205944 ctaccaggcagttgagttggcaccttcctgtgcagagttcagttgtaaaagtagccaagtggtcatgctttcgatgtgctgtcctggtgcgtatgagttcctaggtcacccctggaggatggcagttccgaggcacgcccctggaggtgagagttccatggggacatgctttggtctgtaaatccaccgtcagctctggaggagagacctgtcttggagcacgaagttagaggaacttgctgtgtaggcaatgtcctgtgagggagaggtgagagattatatttgcatttcagcagagctaagcagaaagcagagagccagggaaaggagaaaacagagtgagagggaaaaatataattaaaccacccgtagaaaaatagggAGAACT---GGGggccggggcggtggctcacgcctgtaatcccagcacttcgggaggccaaggccgacgg s panTro5.chr4 192903340 452 + 194502333 ctaccaggcagttgagttggcaccttcctgtgcagagttcagttgtaaaagtagccaaGTGGTCATGCTTTCGACGTGCTGTCCTGGTGCGTGTGAGTTCCTAGGTCACCCCTGGAGGATGGCAGTTCCGAGGCACGCCCCTGGAGGTGAGAGTTCCATGGGGACATGCTTTGGTCTGTAAATCCACCGTCAGCTCTGGAGGAGAGACCTGTCTTGGagcacgaagttagaggaacttgctgtgtaggcaatgtcctgtgagggagaggtgagagattatatttgcatttcagcagagctaagcagaaaacagagagccagggaaaggagaaaacagagtgagagggaaaaatataattaaaccacccgtagaaaaatagggACAACTTTTGGggccaggggcggtggctcacgcctgtaatcccagcactttgggaggccaaggccaacgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787018 452 + 195804263 ctaccaggcagttgagttggcaccttcctgtgcagagttcagttgtaaaagtagccaagtggtcatgctttcgacgtgctgtcctggtgcgtgtgagttcctaggtcacccctggaggatggcagttccgaggcacgcccctggaggtgagagttccatggggacatgctttggtctgtaaatccaccatcagctctggaggagagacctgtcttggagcacgaagttagaggaacttgctgtgtaggcaatgtcctgtgagggagaggtgagagattatatttgcatttcagcagagctaagcagaaaacagagagccagggaaaggagaaaatagagtgagagggaaaaatataattaaaccacccgtagaaaaatagggACAACTTTTGGggccaggggcggtggctcacgcctgtaatcccagcactttgggaggccaaggccaacgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824282 449 + 4876863 ctaccaggcagttgagttggcaccttcctgtgcagagttcagttgtaaaagtagccaagtggtcatgctttcgacgtgctgtcctggtgcgtgtgagttcctaggtcacccctggaggatggcagttccgaggcacgcccctggaggtgagatttccatggggacatgctttggtctgtaaatccaccgtcagctctggaggagagacctgtcttggagcacgaagttagaggaacttgctgtgtaggcaatgtcctgtgagggagaggtgagagattatatttgcatttcagcagagctaagcagaaagcagagagccagggaaaggagaaaacagactgagagggaaaaatataattaaaccacccgtagaaaaatagggagaact---tggggccggggcggtggctcacgcctgtaatcccagcactttgggaggccaaggccgacgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713485 444 + 115148730 ctaccaggcagttgagttggcaccttcctgtgcagagttaagttgtaaaagtagccaagtgggcatgctttcgacgtgctgtcctggtgggtgtgagttcctaggtcacccctggaggatggcagttccgaggcatgcccctggcagtgagagttccatggggacatgctttggtctgtaaatccaccgtcagctctgggggagagatctgtcttggagcagaaagttagaggaacttgccgtgtagggaa-gtcctgtgagggagaggtgcaagattatatttgcatttcagcaaagctacgtagaaagcagagagccaagaaaaggagaaaacaga--gagagggaaaaatataattaagccacccgtagaaaaatgggtac--tt---ggggccgggggcggtggttcatgcgtgtaatcccagcactttgggaggccaaggcaggcgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997085 420 + 190429646 ctaccaggcagttgagctggcaccttcctgtgcagagttaagttgtaaaactagccaaGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCTGCGGCACGCCCCTGGAggtgagagtcccatgggggcatgcttcggtctgtaaatccaccgtcagctctggaggagacatctgtcttggagcacgaagttagaggaacttgccgtgcaggcaatgtccggtgagggagaagtgagagattatatttgcatttcagcagagctaacta-aaagca----------------------------gagagggaaaaatataattaaatcacccgtagaaaaataggggtactt---ggggccgggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggcgg i rheMac8.chr5 I 1673 C 0 s macFas5.chr5 187939861 417 + 189454096 ctaccaggcagttgagctggcaccttcctgtgcagagttaagttgtaaaactagccaaGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCTGCGGCACGCCCCTGGAGGTGAGAGTCCCATGGGGGCATGCTTCGGTCTGTAAAT---CCGTCAGCTCTGGAGGAGGCATCTGTCTTGGagcacgaagttagaggaacttgccgtgcaggcaatgtccggtgagggagaagtgagagattatatttgcatttcagcagagctaacta-aaagca----------------------------gagagggaaaaatataattaaatcacccgtagaaaaataggggtactt---ggggccgggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggcgg i macFas5.chr5 I 1673 C 0 s macNem1.NW_012013133v1 24331598 420 - 25927173 ctaccaggcagttgagctggcaccttcctgtgcagagttaagttgtaaaactagccaaGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCTGCGGCACGTCCCTGGAGGTGAGAGTCCCATGGGGGCATGCTTCGGTCTGTAAATCCACCGTCAGATCTGGAGGAGACATCTGTCTTGGagcacgaagttagaggaacttgccgtgcaggcaatgtccggtgggggagaagtgagagattatatttgcatttcagcagagctaacta-aaagca----------------------------gagagggaaaaaTATAATTAAATCACCCGTAGAAAAATAGGGGTACTT---GGAgccgggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggcgg i macNem1.NW_012013133v1 I 1673 C 0 s cerAty1.NW_012001672v1 3361012 420 + 4669795 ctaccaggcagttgagctggcaccttcctgtgcagagttacgttgtaaaactagccaaGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCTGCAGCACGCCCCTGGAGGTGAGAGTCCCATGGGGGCATGCTTCGGTCTGTAAATCCACCGTCAGCTCTGGAGGAGACATCTGTCTTGGagcacgaagttagaggaacttgccgtgcaggcaatgtccggtgagggagaaatgagagattatatttgcatttcagcagagctaacta-aaagca----------------------------gagagggaaaaaTATAATTAAATCACCCGTAGAAAAATAGGGGTACTT---GGggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggtcgaggtgggcgc i cerAty1.NW_012001672v1 I 1659 I 27 s chlSab2.chr7 134319007 421 + 135778131 cTACCAGGCAGTTGAGCTGGCACCTTCCTGTGCAGAGTTAAGTTGTAAAACTAGCCAAGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCCGCGGCACGCCCCTGGAggtgagagtcccatgggggcatgcttcggtctgtaaatccatcgtcagctctggaggagagatctgtcttagagcacgaagttacaggaacttgccgtgcaggcaatgtccggtgagggagaggtgagagattatatttgcatttcagcagagctaagtagaaagca----------------------------gagagggaaaaaTATAATTAAATCACCTGTAGAAAAATAGGGGTACTT---GGggccggatgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggtgg i chlSab2.chr7 I 1652 C 0 s manLeu1.NW_012102221v1 2771682 420 - 2847728 ctaccaggcagttgagctggcatcttcctgtgcagagttaagttgtaaaactagccaaGTGGGCATGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCACTGGAGGATGGCAGTTCTGCGGCACGCCCCTGGAGGTGAGAGTCCTAAGGGGGCATGCTTCGGTCTGTAAATCCACCGTCAGCTCTGGAGGAGACATCTGTCTTGGagcacgaagttagagcaacttgccgtgcaggcaatgtccggtgagggagaaatgagagattatatttgcatttcagcagagctaacta-aaagca----------------------------gagagggaaaaaTATAATTAAATCACCCGTAGAAAAATAGGGGTACTT---GGggctgggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggcgg i manLeu1.NW_012102221v1 I 1716 C 0 s colAng1.NW_012116221v1 887392 417 + 2368649 ctaccaggcagtggagctggcaccttcctgtgcagagttaagttgtaaaactagccaaGTGGGCTTGCTTTCGACATGCTGTCCTGGTGGGTGTGAGTTCCTAGGTCACCA-TGGAGGATGGCAGTTCCGAGGCACGCCCCTGAAggtgagagttccatgggggcatgctttggtctgtaaatccaccgtcaactctggaggagagatctgacttggagcacgaagttagaggaacttgccgtgcgggcaatgtccggtgagggagagggaagagattatatttgcatttcagcagagctaagtagaaagca----------------------------gagagggaaaaaTATCATTAAATCACCCGTAGAAAAATA---GTACTT---GGggccgggtgcagtggctcatgcctgtcatcccagcactttgggaggccaaggtgggcgg i colAng1.NW_012116221v1 I 1679 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=215118.000000 s hg38.chr4_KI270789v1_alt 116391 46 + 205944 atcatgaggtcaggagttcgagagcaggctggccaacatggtgaaa s panTro5.chr4 192903792 46 + 194502333 atactgaggtcaggagttcgagagcaggctggccaacgtggtgaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787470 46 + 195804263 atactgaggtcaggagttcgagagcaggctggccaacatggtgaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824731 46 + 4876863 atcatgaggtcaggagttcgagagcaggctggccaacatggtgaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713929 46 + 115148730 atcatgaggtcaggagttcgagagcagcctggccaacatggtgaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997505 46 + 190429646 atcatgaggtcaggagttagagagcagcctggtcaacatggtgaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940278 46 + 189454096 atcatgaggtcaggagttagagagcagcctggtcaacatggtgaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332018 46 - 25927173 atcatgaggtcaggagttagagagcagcctggtcaacatggtgaaa i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134319428 46 + 135778131 atcatgaggtcaggagttagagagcagcctggtcaacatggtgaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772102 46 - 2847728 atcatgaggtcaggagttagagaacagcctggtcaacatggtgaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 887809 46 + 2368649 atcatgaggtcaggagttagagagcagcctggtcaacatggtgaaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e cerAty1.NW_012001672v1 3361432 27 + 4669795 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=1046823.000000 s hg38.chr4_KI270789v1_alt 116437 199 + 205944 ccctgtctctactaaaaatacaaaaattagctgggtgtggcagcaggcgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcgtgccactgtgctccagcctgggcaacaagagcaaaactccatctta---aaaaacaaaagaa--------aaaagaaaa s panTro5.chr4 192903838 199 + 194502333 ccctgtctctactaaaaatacaaaaattagctgggtgtggcagcaggcgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcgtgccactgtgctccagcctgggcaacaagagcaaaactccatctta---aaaaacaaaagaa--------aaaagaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787516 196 + 195804263 ccctgtctctactaaaaatacaaaaattagctgggtgtggcagcaggcgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcgtgccactgtgctccagcctgggcaacaagagcaaaactccatctta---aaaaacaa---ag--------aaaaagaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824777 199 + 4876863 ccctgtctctactaaaaatacaaaaattagctgggtgtggcagcaggcacctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcgtgccactgtgctccagcctgggcgacaagagcaaaactccatctta---aaaaacaaaagaa--------aaaagaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112713975 202 + 115148730 ccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgcctgtaatcccaactactcgggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagactgtgccactgcactccagcctgggcaacaagagcaaaactccaccttaaacaaaaagaaaaaga--------aaaagaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997551 192 + 190429646 ctctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgactgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaac-agagcgaaact--gtctca---aaaaaaaaaaaaa--------aaac----c i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940324 193 + 189454096 ctctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacaagagcaaaact--gtctca---aaaaaaaaaaaaa--------aaaa----c i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332064 195 - 25927173 ctctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgcctgtaatcccaactactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacaagagcaaaact--gtctca---aaaaaaaaaaaaa--------aaaa--acc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3361459 192 + 4669795 cccaatctctactaaaaatacaaaaattagctgggtgtggtggcagatgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacaagagcaaaact--gtctca---aaaaaaaaaaaaa--------aCC-----C i cerAty1.NW_012001672v1 I 27 C 0 s chlSab2.chr7 134319474 200 + 135778131 ccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacaagagcaaaact--gtctca---aaaaaaaaaaaaaagaaaaagaaa-----C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772148 192 - 2847728 ctctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggtgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgaactgagattgtgccactgcactctagcctgggcaacaagagcaaaact--gtctca---aaaaaaaaaaaaa--------aac-----c i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 887855 196 + 2368649 ccctgtctctactaaaaatacaaaaattagctgcgtgtgttgacaggtgcctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacaagagcaaaact--gtctcc---aaaaaaaaaaaaa--------aaag-aaac i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189613533 2304 - 190850796 I e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e saiBol1.JH378165 13100421 3655 - 14256875 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=64285.000000 s hg38.chr4_KI270789v1_alt 116636 8 + 205944 agaaaaaT s panTro5.chr4 192904037 8 + 194502333 agaaaaaT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787712 8 + 195804263 agaaaaaT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824976 8 + 4876863 agaaaaaT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714177 8 + 115148730 agaaaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997743 8 + 190429646 agaaaaaT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187940517 8 + 189454096 ataaaaaT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24332259 8 - 25927173 agaaaaaT i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3361651 8 + 4669795 AGAAAAAT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134319674 8 + 135778131 AGAAAAAT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2772340 8 - 2847728 agaaaaaT i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 888051 8 + 2368649 agaaaaaT i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189615837 8 - 190850796 agaaaaat i calJac3.chr3 I 2304 I 1 s saiBol1.JH378165 13104076 8 - 14256875 agaaaaat i saiBol1.JH378165 I 3655 I 1 e cebCap1.NW_016107886v1 996966 2343 - 2196201 I e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e aotNan1.NW_018492112v1 3391700 2363 - 5030052 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=153705.000000 s hg38.chr4_KI270789v1_alt 116644 15 + 205944 GGGGTACTTGGTTAC s panTro5.chr4 192904045 15 + 194502333 GGGGTACTTGGTTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787720 15 + 195804263 GGGGTACTTGGTTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824984 15 + 4876863 GGGGTACTTGGTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714185 15 + 115148730 gaggtacttggttac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997752 15 + 190429646 GGGGTAATTGGTTAT i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187940526 15 + 189454096 GGGGTAATTGGTTAC i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24332268 15 - 25927173 GGGGTAATTGGTTAC i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3361660 15 + 4669795 GGGGTAATTGGTTAC i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134319683 15 + 135778131 GGGGTAATTGGTTAC i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2772349 15 - 2847728 GGGGTAATTGGTTAC i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 888060 15 + 2368649 GGGGTACTTGGTTAC i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189615846 15 - 190850796 ggggtacttggttac i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13104085 15 - 14256875 ggggtacttggttac i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 999309 15 - 2196201 ggggtacttggttac i cebCap1.NW_016107886v1 I 2343 C 0 s aotNan1.NW_018492112v1 3394063 15 - 5030052 ggggtacttggttac i aotNan1.NW_018492112v1 I 2363 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I e otoGar3.GL873580 11232299 11 - 11315646 I a score=347715.000000 s hg38.chr4_KI270789v1_alt 116659 34 + 205944 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA s panTro5.chr4 192904060 34 + 194502333 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787735 34 + 195804263 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3824999 34 + 4876863 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714200 34 + 115148730 attttaagaacctaaaaatctagaatttcatgca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997767 34 + 190429646 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940541 34 + 189454096 ATTTTAagaacctaaaaatctagaatttcatgcg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332283 34 - 25927173 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3361675 34 + 4669795 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134319698 34 + 135778131 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772364 34 - 2847728 ATTTTAAGAACCTAAAAATCTAGAATTTCATGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888075 34 + 2368649 AATGTAagaacctaaaaatctagaatttcatgca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189615861 34 - 190850796 aTTTTAAGAACCTAAAGATCTAGAATTTCATGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104100 13 - 14256875 aTTTTAAGAACCT--------------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999324 34 - 2196201 aTTTTAAGAACATAAAAATCTAGAATTTCATGCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394078 34 - 5030052 aTTTTAAGAACCTAAAAATCTAGAATTTCATGCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232310 34 - 11315646 ATCTTGAGAATCTATAAGTATAGAATTTCAGGCA i otoGar3.GL873580 I 11 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446510 0 - 2520184 C e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I a score=383002.000000 s hg38.chr4_KI270789v1_alt 116693 38 + 205944 AAACTCATAATTTTCAAG--T--TGGTAATTAATTTTCAAAT s panTro5.chr4 192904094 38 + 194502333 AAACTCATAATGTTCAAG--T--TGGTAATTAATTTTCAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787769 38 + 195804263 AAACTCATAATGTTCAAG--T--TGGTAATTAATTTTCAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825033 38 + 4876863 AAACTCATAATTTTCAAG--T--TGGTAATTAATTTTCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714234 38 + 115148730 aaactcttaattttcaag--t--tggtaattaattttcaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997801 38 + 190429646 AAACTCTTGATTTTCAAC--T--TGGTAATTAATTTTCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940575 38 + 189454096 aaactcttgattttcaac--t--tggtaattaattttcaaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332317 38 - 25927173 AAACTCTTGATTTTCAAC--T--TGGTAATTAATTTTCAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3361709 38 + 4669795 AAACTCTTGATTTTCAAC--T--TGGTAATTAATTTTCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134319732 38 + 135778131 AAACTCTTGATTTTCAAC--T--TGGTAATTAATTTTCAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772398 38 - 2847728 AAACTCTTGATTTTCAAC--T--TGGTAATTAATTTTCAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888109 38 + 2368649 aaactcttgattttcaag--t--tggcaattgattttcaaat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189615895 38 - 190850796 AAACACTTGAATTTCAAG--T--TAGCAATTAATTTTCAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104113 34 - 14256875 ----TTTTGAGTTTCAAG--T--TAGCAATTAATTTTCAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999358 38 - 2196201 AAACACTTGAATTTCAAG--T--TAGCAATTAATTTTCAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394112 37 - 5030052 AAACACTTGAATTTCAAG--T--TAGCAATTAATTTTC-AAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232344 40 - 11315646 AAACTCTTGATTTTCAACTAT--TGATAATTCATTTTTAAAT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1446510 40 - 2520184 AAACTGTTTATGTTTAAC--TGCTGGTAGTTAATCGAAACAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I e mm10.chr8 86606995 732 - 129401213 I a score=372862.000000 s hg38.chr4_KI270789v1_alt 116731 41 + 205944 GTAAACATATTGTG-GCTCGCAAAGAA----CAATAAGATCAATCA s panTro5.chr4 192904132 41 + 194502333 GTAAACATATTGTG-GCTCGCAAAGAA----CAATAAGATCAATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787807 41 + 195804263 GTAAACATATTGTG-GCTCGCAAAGAA----CAATAAGATCAATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825071 41 + 4876863 GTAAACATATTGTG-GCTCGCAAAGAA----CAATAAGATCAATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714272 41 + 115148730 gtaaacatattgtg-GTTCGCAAAGAA----CAGTAAGATCAATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997839 41 + 190429646 GTAAACATATTGTG-TTTTGCAAAGAA----CAGTAAGACCAACCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940613 41 + 189454096 gtaaacatattgtg-TTTTGCAAAGAA----CAATAAGACCAACCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332355 41 - 25927173 GTAAACATATTGTG-TTTTGCAAAGAA----CAATAAGACCAACCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3361747 41 + 4669795 GTAAACATATTGTG-TTTTGCAAAGAA----CAATAAGACCAACCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134319770 41 + 135778131 GTAAACATACTGTG-TTTTGCAAAGAA----CAATAAGACCAACCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772436 38 - 2847728 GTAAACATATTGTG-TTTTGCAAAG-------AATAAGACCAACCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888147 41 + 2368649 gtaaacatattatg-TTTTGCAAAGAA----CAATAAGACCAACCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189615933 41 - 190850796 GTACACGTATTGTT-GCCTCCAGAGAA----CAATAAGACCTACCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104147 41 - 14256875 GTAGACTTATTGTT-GTCTCCAGAGAA----CAATAAGACCTACCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999396 41 - 2196201 GTAGACATATTGTT-GTCTCCAGAGAA----CAATAAGACCTACCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394149 41 - 5030052 GTAGACATATTGTT-GTCTCCAGAGAA----CAGTAAGACCTACCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232384 39 - 11315646 GTGAATATACTGTG-CTTTCTAAAAGA----CAAGAAAAGAAA--A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86607727 41 - 129401213 GTGAGCATACCATGCTTTCCCAAAGAA----CAAGGAGACTC-CTA i mm10.chr8 I 732 C 0 s dasNov3.JH570353 1446550 44 - 2520184 GTGACAGCACTGTG-CCTTCCACAGGAATAGCAACAGGA-CAACAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e canFam3.chr16 16953261 122 - 59632846 I a score=4032374.000000 s hg38.chr4_KI270789v1_alt 116772 420 + 205944 ACC-AATAAAGGCAAA-AATAGAGAGTAAGGA------AGAATCCACACTAAGAAGCGTGAAGACTTGAT-TAGAGA--CATA-------------------------AGCCAAAGAAAGGAGATGTGTTCAGTGTTTACTGCCATGTGCCAAGCAGGGGCGGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCTGGTAAATTAG-AGCCGATGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAACCCAAGCTTGATGATTGGGAGAATGGTGGTCCCGTGACTTGTCCCACCGAAGCCAAAGAAAGAACA-GATCTAA-GGGAT-GGTGATCTTTGAGCAAGCTCGT----------T----TCCCTCACACGTTCCAGCGC--TGT--TTCACGCCAGGCTCTGGGATTGAATGATATCCCTGGATCAGGTTCACTGGCGTCC-CCTGCTGGCAC--------AGAGC s panTro5.chr4 192904173 420 + 194502333 ACC-AATAAAGGCAAA-AATAGAGAGTAAGGA------AGAATCCACACTAAGAAGCGTGAAGACTTGAT-TAGAGA--CATA-------------------------AGCCAAAGAAAGGAGATGTGTTCAGTGTTTACTGCCATGTGCCAAGCAGGGGCGGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGATGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAACCCAAGCTTGATGATTGGGAGAATGGTGGTCCCGTGACTTGCCCCACTGAAGCCAAAGAAAGAACA-GATCTAA-GGGAT-GGTGATCTTTGAGCAAGCTCGT----------T----TCCCTCACACGTTCCAGCGC--TGT--TTCACGCCAGGCTCTGGGATTGAATGATACCCCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192787848 420 + 195804263 ACC-AATAAAGGCAAA-AATAGAGAGTAAGGA------AGAATCCACACTAAGAAGCGTGAAGACTTGAT-TAGAGA--CATA-------------------------AGCCAAAGAAAGGAGATGTGTTCAGTGTTTACTGCCATGTGCCAAGCAGGGGCGGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGATGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAACCCAAGCTTGATGATTGGGAGAATGGTGGTCCCGTGACTTGCCCCACTGAAGCCAAAGAAAGAACA-GATCTAA-GGGAT-GGTGATCTTTGAGCAAGCTCGT----------T----TCCCTCACACGTTCCAGCGC--TGT--TTCACGCCAGGCTCTGGGATTGAATGATACCCCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825112 422 + 4876863 ACC-AATAAAGGCAAA-AATAGAGAGTAAGGA------AGAATCCACACTAAGAAGCGTGAAGACTTGAT-TAGAGA--CATA-------------------------AGCCAAAGAAAGGAGATGTGTTCAGTGTTTACTGCCATGTGCCAAGCAGGGGCGGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCTATGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAACCCAAGCTTGATGATTGGGAGAATGGTGGTCCCGTGACTTGCCCCACTGAAGCCAAAGAAAGAACA-GATCTAA-GGGAT-GGTGATCTTTGAGCAAGTTCGT----------T----TCCCTCACACGTTCCAGCGCTGTGT--TTCACGCCAGGCTCTGGGATTGAATGATACCGCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714313 422 + 115148730 ACC-AATAAAGGCAAA-AATAGAGAGTAAGGA------AGAATCCACACTAAGAAGCGTGAAGACTTGAT-TAGGGA--CATA-------------------------AGCTGAAGAAAGGAGATGTGTTTAGTGTTTACTGCCATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGATGACATAT--GAGTCCAAAAGAGATAAGAGG------------------ATGCCGAACCCAAGCTTGATGATTGGGAGAATGGTGATCCCGTGACTTGCCCCACTGAACCCAAAGAAAGAACA-GATCTAA-GGGAT-GGTGATCTTTGAGCAAGTTGGT----------T----TCCCTCACACGTTCCAGCCCTGTGT--TTCATACCAGGCTCTGGGATTGAATGATACCCCTGGATCGGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188997880 444 + 190429646 ACC-AATAAAGGCAAA-AATTAAGAGTAAGAA------AGAATCCACACCAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTATAGAGCTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCTATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-ACCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAGCCCAAGCTCCATGATTGGGAGAATGGTGGTCCCGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAC-AGTGATCTTTGAGCAAGCTCCT----------CTCCCTCCCTCACACGTTCCAG-GC--TGT--TTCACGCCAGGCTCCGGGACGGAATGATACCCCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187940654 444 + 189454096 ACC-AATAAAGGCAAA-AATTAAGAGTAAGAA------AGAATCCACACCAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTATAGAGCTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCTATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAGCCCAAGCTCCATGATTGGGAGAATGGTGGTCCCGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAC-AGTGATCTTTGAGCAAGCTCCT----------CTCCCTCCCTCACACGTTCCAG-GC--TGT--TTCACGCCAGGCTCTGGGACTGAATGATACCCCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332396 444 - 25927173 ACC-AATAAAGGCAAA-AATTAAGAATAAGAA------AGAATCCACACCAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTATAGAGGTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCTATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAGCCCAAGCTCCATGACTGGGAGAATGGTGGTCCCGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAC-AGTGATCTTTGAGCAAGCTCCT----------TTCCCTCCCTCACACGTTCCAG-GC--TGT--TTCACGCCAGGCTCTGGGACTGAATGATACCCCTGGATCAGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3361788 444 + 4669795 ACC-AATAAAGGCAAA-AATTAAGAATAAGAA------AGAATCCACACAAAGAAGCATGAAGACTGCAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTATAGAGCTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCTATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGCGGAAG--GCAATATCCGGTAAATTAG-AGCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAGCCCAAGCTCGATGATTGGGAGAATGGTGGTCCCGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAC-AGTGATCTTTGAGCAAGCTCCT----------TTCCCTCCCTCACAGGTTCCAG-GC--TGT--TTCACGCCAGGCTCTGGGACTGAATGATACCCCTGGATCGGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134319811 441 + 135778131 ACC-AATAAAGGCAAA-AATTAAGAA----AA------AGAATCCACACCAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTACAGACCTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCCATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACACTGAGCCCAAGCTCCATGATTGGGAGAATGGTGGTCCCGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAT-AGTGATCTTTGAGCAAGCTCCT----------TTCCCTCCCTCACACGTTCCAG-GC--TGTG-TTCACGCCAGGCCCTGGGACTGAATGATACCCGTGGATCGGGTTCACTGGCGCCC-CCTGCTGGCAC--------GGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772474 444 - 2847728 ACC-AATAAAGGCAAA-AATTAAGAATAAGAA------AGAATCCACACCAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAGATAGAACTCTGTTAGTATAGAGCTGAAGAAGGGAGATGTGTTCAGTGTTTACTGCTATGTGCCAAGCAGGGGCTGGTGAAGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAATATCCGGTAAATTAG-AGCCGACGACATAT--GAGTCCAAAGGAGAAAAGAGG------------------ACGCTGAGCCCAAGCTCGATGATTGGGAGAATGGTGGTCCGGTGATTTGCCCCACTGAACCCT----AAGAACA-GATCTAA-GGGAC-AGTGATCTTTGCGCAAGCTCCT----------TTCCCTCCCTCACAGGTTCCAG-GC--TGT--TTCACGCCAGGCTCCGGGACTGAATGATACCCCTGGATCGGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888188 445 + 2368649 ACC-AATAAAGGCAAA-AATTGAGAATAAGAA------AGAATCCACACTAAGAAGCATGAAGACTTGAT-TAGAGA--CAAATACAAATAGAACTCTATTAGTATAGAGCTGAAGAAAGGAGATGTGTTCGGTGTTTACTGCTGTGTGCCAAGCAGGGGCTGGTGACGACAATGGCAATGTGAACAG----CTAGGAGGAAG--GCAGTATCCGGTAAATTAG-AGCCCATGACATGT--GAGTCCAAAGGAGAAAAGAGT------------------ACGCTGAGCCCAAGCTCGATGATTGGGAGAATGGTGGTCCCGTGATTTG-CCCACTGAACCCTAAGAAAGAACA-GATCTAA-GGGAT-AGTGACCTTTGAGCAAGCTCCT----------T----GCTCTCACACGTTCCAG-GC--TGTGTTTCACGCCAGGCCCTGGGACTGGATGATGCGCCTGGATCGGGTTCACTGGCGCCC-CCTGCTGGCAC--------AGAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189615974 387 - 190850796 ACCAAATAAAGGCAAA-AGTAGAGCGTAAGGG------AGAATCCACACTAAGAAGCATGAAGGCCTGAT-TAGAGA--CATG-------------------------AGGTGAAGACAGGAGATG---TAAGTG-TTACTG-------------------------AAGAAACGGCAAAGTGAGCAC----CCGGGCGGGAG--GCAGTATCAGGTAACTTAG-AGCCAACGACATAT--GGCTCCACAGGAGAAGAGACC------------------ACGCTGAACCCGAGCTTGATGAGTGGGAGAATGGCGGCCCTGTGACTTGCGCCACTGAACCCAAAGGAAGAGCAGGATCTGG-GGGAG-GGTGACCTTGGAGCAAGCTCACGTCCCTCACAG----TCCCTCACA--TTCCAGCAC--AGT--TTGGAGCCAGGCTCTGGGACTGAACGATGCCCCTGGATCACGTGC--------------GCTGGCAT---------GAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104188 419 - 14256875 ACC-AATAAAGGCAAA-AGCAGAGCGTAAGGG------AGAATCCACACTAAAAAGCAGGAAGACTTGAT-TAGAAA--CATG-------------------------AGTCGAAGAAAGGAGATGTGTTATGTGTTTACTGCTGTATGCCAAGCAGGGGCCGGTGAAAACAATGGCAAAGTGAACAC----CCAGGAGGAAG--GCAATATCAGGTAATTTAG-AGCCAACGACATAT--GACTCCAGAGGAGAAAAGACG------------------ACGCTGAACCCAAGCTTGATGAGTGGGAGAATGGTGGTCCTGTGACTTGCCCCACTGAACCCAAAGGAAGAACAGGATCTAA-GGCAT-GGTCATCTTTGAGCAAGCTCAC----------G----TCCCTCACA--TTCCGGTGCCGCGT--TTCAAGCCAGGCTCTGGGACTGAAGGATGCCCCTGGATCACGTGCGCTGATG-CC-TCTGCTGGCAC---------GAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999437 418 - 2196201 ACC-AATAAAGGCAAA-AGTGGAGCGTAAGGG------AGAATCCACACTAAAAAGCATGAAGACTTGAT-TAGAGA--CATG-------------------------AGTTGAAGAAAGGAGATGTGTTAAGTGTTTACTGCTGTATACCAAGCAGGGGCCGGTGAAGACAATGGCAAAGCGAACAC----CCAGGAGGAAG--GCAATATCAGGTAATTTAG-AGCCAATGACATAT--GACTCCAGAGGAGAAAAGACG------------------AGGCTGAACCCGAGCTTGGTGAGTGGGAGAATGGTGGTCCTGTGACTTGCCCCACTGAACCCAAAGGAAGAACAGGATCTAA-GGGAT-GGTGATCTTTGAGCAAGCTCAC----------G----TGCCTCACA--TTCCAGCGCGGTGT--TTCAAGCCA-GCTCTGGGACTGAATGATGCCCTTGGATCACGTGCGCTGGTG-CC-TCTGCTGGCAA---------GAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394190 410 - 5030052 ACC-AATAAAGGCAAA-CGTAGAGCGTAAGGG------AGAATCCACACTAAAAAGCATGAAGACTTGAT-----------AG-------------------------AGTCGAAGAAAGGAGATGTGTTAAGTGTTTACTGCTGTATGCCGAGCAGGGGCCGGTGAAGACAATGGCAAAGTGAACAC----CCAGGAGGAAG--ACAATATCAGGTAATTTAG-AGCCAACGACATAT--GACTCCGGAGGAGAAAAGATG------------------ACGCTGAACCCGAGCTTGATGAGTGGGAGAACGCTGGTCCTGTGACTTGCCCCACTGAACCCAAAGGAAGAACAGGATCTAA-GGGAT-GGTGATCTTTGAGCAAGCTCAC----------G----TCCCTCACA--TTCCGGCATGGCGT--TTCAAGCCAGGCTCTGGGACTGAATGATGCCCCTGGATCACG-GCGCTGGTG-CC-TCTGCTAGCAC---------GAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232423 423 - 11315646 ACC-AAGAAAAGCAAA-AACAGCAGGTCAGGA------AGAGCCCACACTATGAAGTATGAAGAAGCCATTTGGGGA--AATG-------------------------AGCCTAAGGAAGGATATGTGTCTCATGGTTCCTGCAAAAGGCCAAGTAGAGGCTGGTGAGGACAACAGTGA-GTGAATCC----CCAGGAGGAAGCCGCAAAA---GGCGAGTTAG-AGC------CACAT--GAGCCCA-AGGAGAAGAGGTG------------------ATGCTGAACCTGAGATTGATGACTGAGAGAACAGTGGCTCCATGACTTGTCCCACTGAGCTCAAGGAAAGAGCA-GATCAAAGGGGAC-AGTGATCTTTGAACAAGCCCAT----------G----TCTCTCGCACCTCCCAGCAGCATGT--TCACCTCCAGGCTCTGAGACTGACAGCTATTCCCAGACCATGTGC-TTGGTGTCCAACAGAGGACACCAGTACAAAAAGG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86607768 395 - 129401213 ACA-AGTCAGTACAAACAATCGAGGAGCAGGA------CAAGTCCACTCCAA------TGAAGGACAGTC-TGTTAG--CATG-------------------------AGCATAAGAAAAAAGATTTGTTAAATGTTTAATGAATTAAGAGAAATGAAGGCTGAGGAGTGC-TTGGCAGTGTCAATTC----CAAGGGTAAAG--TTATCTTAAAGCAAAGGGGAAGACAGTGATATAG--GAGTTCAGGAGTGATAAG-----------------------GCTAAGCCTGCATTTGGTTTTTGTGAGAAGGGTTGTTCTGTAGGTTGCACCACTCAACCTAAAGAAAGAGAAGGATCAAA-GAGA---GTGA------------CTATA----------T----TTCATCACTGGTCTATA-AG--TGT--GCCCATCAATGC-CTGGGACTGCCTGATACCACAAGGACATGTGCATGATTGCCA-CTTGTTGATAC--------AATGC i mm10.chr8 C 0 I 40 s canFam3.chr16 16953383 393 - 59632846 ACC-AGCCAGGTAGAA-GAGAGGTAGCAGGGACCAGATGGAACACACCTTAAGAAACATGAGGATTTGAT-TAGAGA--CGTC-------------------------AGCCTAAGCAAGGATGCTTGTTAAAG--TTACTGTAATAGACTAAGTAGGGGTTTGTGAAGACCATGGTAATGTGAATACCATACCAAGAGGAAG--TTAATATTAGATAAATCAG-AGCCACTGAAATGC--AAACTCAagagagagagagagagagagagagagagagaTATGCTAAA-TTGAGTTTGGGAAAGGAGAGAATGGTGGTACCATCAATTGCACCACTGAACCCCAGCAAAGACCAGGATCAAA-GAGGTGGGTGATCTTCAAACA------T----------T----TCCCTCACA---------GC---AT--TTAGCTTCATGCTCCAGGATTTAGAGCCCCCCC----------------------------------------------- i canFam3.chr16 I 122 C 0 s dasNov3.JH570353 1446594 366 - 2520184 ACT-AATACAGACAAACAACTGAGGGCCAGGA------AGAGTCCACACTAAGAA---TGAA---TTATA-TAGGGAGCCATG-------------------------GGCCGGGGCAGGGAA--------------CCCTGTGATAGGCCGAGCAGGGGATGGCGAGGGCAGGAGTCCTAGGGCCA-----CTGGGAAGAAG--GCGGCATTTGGGAAACCAG-AGCTGATGAGGTGTGAGAGTCCA----AGAGAAGAGA--------------------GCTGAGCCTGAGGCTGGCGACTGGAGGAACGG-GGTGCAG---------------------AAGGAGGAGCAGGATCAAA-GAGGG-AGCCGGTTTTCTACAGGCGCGT----------T----TCCCTCACACACTAGAGCAG--ACT--TT------GGGCTCTGGGATTGGTTGAGG----TGGCTCATGTGCTCGGCTTCCC-TCTGCGGGTGC--------AAAG- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I a score=94899.000000 s hg38.chr4_KI270789v1_alt 117192 9 + 205944 AGCACAAAG s panTro5.chr4 192904593 9 + 194502333 AGCACAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788268 9 + 195804263 AGCACAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825534 9 + 4876863 AGCACAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714735 9 + 115148730 AGCACAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998324 9 + 190429646 AGCACAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941098 9 + 189454096 AGCACAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332840 9 - 25927173 AGCACAAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362232 9 + 4669795 AGCGCAAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320252 9 + 135778131 AGCACAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772918 9 - 2847728 AGCGCAAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888633 9 + 2368649 AGCACAAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616361 9 - 190850796 AGCGCGCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104607 9 - 14256875 AGCACAACG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999855 9 - 2196201 AGCACAATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394600 9 - 5030052 AGCACAATG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232846 9 - 11315646 AGCACACTG i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1446960 8 - 2520184 -GAACAGAG i dasNov3.JH570353 C 0 I 50 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e canFam3.chr16 16953776 0 - 59632846 C e mm10.chr8 86608163 40 - 129401213 I a score=346257.000000 s hg38.chr4_KI270789v1_alt 117201 39 + 205944 ACTTCGAAACTGGATACGCTGATAAATTTATG-AAATCTC s panTro5.chr4 192904602 39 + 194502333 ACTTCGAAACTGGATACGCTGATAAATTTATG-AAATCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788277 39 + 195804263 ACTTCGAAACTGGATACGCTGATACATTTATG-AAATCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825543 39 + 4876863 ACTTCGAAACTGGATACGCTGATAAATTGATG-AAATCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714744 39 + 115148730 ACTTCAAAACTGGATGCACTGATAAATTTATG-AAATCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998333 39 + 190429646 GCTTCGAAACTGGATAGGCTGATACATTTATG-AAATCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941107 39 + 189454096 GCTTCGAAACTGGATAGGCTGATACATTTATG-AAATCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332849 39 - 25927173 GCTTCGAAACTGGATAGGCTGATACATTTATG-AAATCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362241 39 + 4669795 ACTTCAAAACTGGATAGGCTGATACATTTATC-AAATCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320261 39 + 135778131 GCTTCGACACTGGATGGGCTGATACATTCATG-AAATCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772927 39 - 2847728 GCTTCGAAACTGGATAGGCTGATACATTTATG-AAATCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888642 39 + 2368649 ACTTCGAAACTGGATACGCTGATACATTCATG-AAATCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616370 36 - 190850796 ---CCAAAACTGGGTACTCTGATAAATTCGTG-AAATCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104616 39 - 14256875 ACTTCGAAACGGGGTACTCTGATAAATTCATG-AACTCTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999864 39 - 2196201 ATTCCGAAACCGGGTACTCTGATAAACTCATG-AAATCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394609 39 - 5030052 ATTCCAAAACTGGGTACTCTGATAAATTCATG-AAATCTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232855 39 - 11315646 ACCTGGGACCTGGATTCTCTGATAAATGTACGTAAATCT- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16953776 7 - 59632846 ---------------------------------AAATCTC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446968 50 - 2520184 I e mm10.chr8 86608163 40 - 129401213 I a score=23075.000000 s hg38.chr4_KI270789v1_alt 117240 6 + 205944 CACAAA s panTro5.chr4 192904641 6 + 194502333 CACAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788316 6 + 195804263 CACAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825582 6 + 4876863 CACAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714783 6 + 115148730 CACAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998372 6 + 190429646 AAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941146 6 + 189454096 AAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332888 6 - 25927173 AAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362280 6 + 4669795 AAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320300 6 + 135778131 AAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772966 6 - 2847728 AAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888681 6 + 2368649 AAAGAA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11232894 6 - 11315646 CAAAGA i otoGar3.GL873580 C 0 I 20 e calJac3.chr3 189616406 0 - 190850796 C e cebCap1.NW_016107886v1 999903 0 - 2196201 C e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446968 50 - 2520184 I e canFam3.chr16 16953783 0 - 59632846 C e mm10.chr8 86608163 40 - 129401213 I e aotNan1.NW_018492112v1 3394648 0 - 5030052 C e saiBol1.JH378165 13104655 0 - 14256875 C a score=1454517.000000 s hg38.chr4_KI270789v1_alt 117246 310 + 205944 CTAGAGAACACGggctaggtgcggtggctcacacctgtaatcccagcactttgggaagccgaggcgggtggatcacgaggtcatgagatcgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaattagctgggcatggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaagcccggaggcggagcttgcagtgaccagagatcactccactgc------actccatcctaggcgacacggtgagactctgtctc-------aaaaaaaaacaaaca--ca s panTro5.chr4 192904647 317 + 194502333 CTAGAGAACACGggctgggtgcggtggctcacgcctgtaatcccagcactttgggaagccgaggcgggtggatcacgaggtcatgagatcgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggcatgttcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaagcccggaggtggagcttgcagtgaccagagatcgctccactgc------actccatcctaggcgacacagcgagactccgtctccaaaaaaaaaaaaaaaaaaaca--ca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788322 314 + 195804263 CTAGAGAACACGggctgggtgtggtggctcacgcctgtaatcccagcactttgggaagccgaggcgggtggatcacgaggtcatgagattgagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggcaggttcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaagcccggaggtggagcttgcagtgaccagagatcgctccactgc------actccatcctaggcgacacagcgagactccgtctacc-----aaaaaaaaaaaaacaacca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825588 314 + 4876863 CTAGAGAACACGggctgggtgcggtggctcacgcctgtaatcccagcactttgggaagccaaggcgggtggatcacgaggtcatgagatggagaccagcctggccaacatagtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaagcctggaggcggagcttgcagtgaccagagatcactccactgc------actccatcctaggcgacacggcgagactctgtctcaaaa---aaaaaaaaaaaaaaa--ca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112714789 313 + 115148730 CTAGAGAACATGggcagggtgcggtggctcacgcctgtaatcccaggactttgggaaaccgaggtgggcggatcacgaggtcatgagatcgagaccagcctggccaacatagtgaaaccctatctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaagcctggaggcggagcttgtagtgaccagagatcgcaccactgcactccaactccatcctaggtgacagagcgagatttcatctc-------aaaaaacaaaaa-----ca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998378 316 + 190429646 CTAGACAACGTGgaccgggcctggtggctcacgcctgtaatcccagcactttgcaaagcggaggcgggtggatcac-aggtcaggagattgagaccacactggtcaacataatgaagccccatctctactaaaaatacaaaaaattagctaggcgtggtggtggatgcctgtagtcctggctactcgggaggccgaggcaggagaatcgccttaagctgggaggtggagcttgcagtgaccagagactgcaccactgc------actgcatcctgggtgacagagcgagactgtggcaaaaaaaaaaaaaaaaaaaaaaaa--aa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941152 316 + 189454096 CTAGACAACGTGgaccgggcctggtggctcacgcctgtaatcccagcactttggaaagcggaggcgggtggatcac-aggtcaggagattgagaccacactggtcaacataatgaagccccatctctactaaaaatacaaaaaattagctaggcgtggtggtggatgcctgtagtcctggctactcgggaggccgaggcaggagaatcgccttaagctgggaggtggagcttgcagtgaccagagattgcaccactgc------actgcatcctgggtgacagagcgagactgtggcaaaaaaaaaaaaaaaaaaaaaaca--aa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24332894 316 - 25927173 CTAGACAACGTGgaccgggcctggtggctcacgcctgtaatcccagcactttggaaagcggaggcgggtgggtcac-aggtcaggagattgagaccacactggtcaacataatgaagccccatctctactaaaaatacaaaaaattagcttggcgtggtggtggatgcctgtagtcctggctactcaggaggctgaggcaggagaatcgccttaagctgggaggtggagcttgcagtgaccagagattgcaccactgc------actgcatcctgggtgacagagcgagactGTGGCaaaaaaaaaaaaaaaaaaaaaaaa--aa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362286 317 + 4669795 CTAGACAAGGTGgaccgggcctggtggctcacgcctgtaatcccagcactttggaaagcggaggcgggtggatcacaaggtcaggagattgagaccacactggccaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctaggcgtggtggtggatgcctgtagtcctggctactccggaggccgaggcaggagaatcgctttaagctgggaggtggagcttgcagtgaccagagatcgcaccactgc------actgcatcctgggtgacagagcgagactGTGGcaaacaaacaaacaaacaaacaaac--aa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320306 307 + 135778131 CTAGACAACGTGgacctggcctggtggctcacgcctgtaatcccagcactttggaaagcggaggcgggtggatcacgaggtcaggagattgagaccacactggtcaacgtaatgaaaccccatctctactaaaaatacaaaaaattaactaggtgtggtggtggatgcctgtagtcctggctactcgggaggctgaggcaggagaatcactttaagctgggaggtggagcttgcagtgaccagagatcgcaccactgt------actgcatcctgggtgacagagcgagactgtggcaa-------aaaaaaaaaacca-----a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2772972 316 - 2847728 CCAGACAACGTGgaccgggcctggtggctcacgcctgtaatcccagcactttggaaagcggaggcgggtggatcacaaggtcaggagattgagaccacactggtcaacataatgaagccccatctctgctaaaaatacaaaaacttagctgggcgtggtggtggatgcctgtagtcctggctactcgggaggccgaggcaggagaatcgctttaagctgggaggtggagcttgcagtgaccagagatcgcaccactgc------actgcatcctgggtgacagagcgagactgtggcaaaaaaac-aaaaaaaaaacaaaa--ca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 888687 317 + 2368649 TTAAACAACATGgaccgggcctggtggctcacgcctgtcatcccagcactttggaaagcagaggcgggtggatcatgaggtcaggagattgagaccagactggtcaacatagtgaaaccccatctgtactaaaaatacaaaaaattagctagacatggtggtgggtgcctgtagtcctggtgactagggaggctgaggcaggagaatcgcttcaagctgggaggcggagcttgcagtgaccagagatcgcgccactgt------actccatcctgggtgacagagcgagactgtgggaaaaaaaacaaaaacaaaataaaa--ca i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16953783 78 - 59632846 -------------------------------------------------------AAGT----GCTGGTG------------------------------------------------------CCTTCTAAAAGAATGAAAGAGCA---------------------------------------------------CAGCACAAT------------------GGAGGCTGTA------------TACTCTAATGC------ATTATGT----------------AAATTTC------------------------------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189616406 0 - 190850796 C e cebCap1.NW_016107886v1 999903 0 - 2196201 C e proCoq1.NW_012145301v1 3950786 777 + 3993831 I e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446968 50 - 2520184 I e mm10.chr8 86608163 40 - 129401213 I e aotNan1.NW_018492112v1 3394648 0 - 5030052 C e saiBol1.JH378165 13104655 0 - 14256875 C e otoGar3.GL873580 11232900 20 - 11315646 I a score=13923.000000 s hg38.chr4_KI270789v1_alt 117556 1 + 205944 a s panTro5.chr4 192904964 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788636 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825902 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715102 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998694 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941468 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333210 1 - 25927173 a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362603 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320613 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773288 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889004 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616406 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104655 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999903 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394648 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3951563 1 + 3993831 A i proCoq1.NW_012145301v1 I 777 C 0 s canFam3.chr16 16953861 1 - 59632846 A i canFam3.chr16 C 0 C 0 e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446968 50 - 2520184 I e mm10.chr8 86608163 40 - 129401213 I e otoGar3.GL873580 11232900 20 - 11315646 I a score=20576.000000 s hg38.chr4_KI270789v1_alt 117557 7 + 205944 aa-------aCACT s panTro5.chr4 192904965 7 + 194502333 aa-------aTACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788637 7 + 195804263 aa-------aTACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825903 7 + 4876863 aa-------aTACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715103 7 + 115148730 aa-------aaaCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998695 11 + 190429646 aa---CACAAAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941469 11 + 189454096 aa---CACAAAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333211 14 - 25927173 aaaaCCACAAAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362604 4 + 4669795 AA----------CT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320614 4 + 135778131 aa----------CT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773289 4 - 2847728 aa----------CT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889005 6 + 2368649 aa--------aACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616407 7 - 190850796 AA-------AAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104656 7 - 14256875 AA-------AAACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999904 7 - 2196201 AA-------AAACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394649 7 - 5030052 AA-------AAACT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3951564 7 + 3993831 AA-------AAACT i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86608203 7 - 129401213 AA-------ACCTA i mm10.chr8 I 40 C 0 s canFam3.chr16 16953862 7 - 59632846 AA-------GAACT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17510333 824 - 93316391 I e dasNov3.JH570353 1446968 50 - 2520184 I e otoGar3.GL873580 11232900 20 - 11315646 I a score=95002.000000 s hg38.chr4_KI270789v1_alt 117564 7 + 205944 AGAGAAC s panTro5.chr4 192904972 7 + 194502333 TGAGAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788644 7 + 195804263 TGAGAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825910 7 + 4876863 AGAGAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715110 7 + 115148730 AGAGAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998706 7 + 190429646 AGAGAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941480 7 + 189454096 AGAGAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333225 7 - 25927173 AGAGAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362608 7 + 4669795 AGAGAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320618 7 + 135778131 AGAGAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773293 7 - 2847728 AGAGAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889011 7 + 2368649 AGAGAAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616414 7 - 190850796 AGAGAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104663 7 - 14256875 AGAGAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999911 7 - 2196201 AGAGAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394656 7 - 5030052 AGAGAAC i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3951571 7 + 3993831 AAAAAAC i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86608210 7 - 129401213 AGAGAGC i mm10.chr8 C 0 C 0 s canFam3.chr16 16953869 6 - 59632846 AGAGAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447018 7 - 2520184 AGAGAAA i dasNov3.JH570353 I 50 C 0 e micMur3.chr14 17510333 824 - 93316391 I e otoGar3.GL873580 11232900 20 - 11315646 I a score=73753.000000 s hg38.chr4_KI270789v1_alt 117571 5 + 205944 ATGTT s panTro5.chr4 192904979 5 + 194502333 ATGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788651 5 + 195804263 ATGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825917 5 + 4876863 ATGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715117 5 + 115148730 ATGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998713 5 + 190429646 ATGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941487 5 + 189454096 ATGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333232 5 - 25927173 ATGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362615 5 + 4669795 ATGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320625 5 + 135778131 ATGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773300 5 - 2847728 ATGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889018 5 + 2368649 ATGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616421 5 - 190850796 GTGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104670 5 - 14256875 GTGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999918 5 - 2196201 GTGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394663 5 - 5030052 GTGTT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3951578 5 + 3993831 ATGCT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11232920 5 - 11315646 ATGCT i otoGar3.GL873580 I 20 C 0 s mm10.chr8 86608217 5 - 129401213 ACGGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16953875 5 - 59632846 ATGTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447025 5 - 2520184 ATCTT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17510333 824 - 93316391 I a score=304661.000000 s hg38.chr4_KI270789v1_alt 117576 24 + 205944 ATTAAATAATAGAAAGAAAGAATG s panTro5.chr4 192904984 24 + 194502333 ATTAAATAATAGAAAGAAAGAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788656 24 + 195804263 ATTAAATAATAGAAAGAAAGAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825922 24 + 4876863 ATTAAATAATAGAAAGAAAGAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715122 24 + 115148730 ATTAAATAATAGAAAGAAAGAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998718 20 + 190429646 AT----TAATAGAAACAAAGAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941492 20 + 189454096 AT----TAATAGAAACAAAGAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333237 20 - 25927173 AT----TAATAGAAACAAAGAATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362620 20 + 4669795 AT----TAATAGAAACAAAGAATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320630 20 + 135778131 AT----TAATAGAAACAAAGAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773305 20 - 2847728 AT----TAATAGAAACAAAGAATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889023 20 + 2368649 AT----TAATAGAAACAAAGAATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616426 24 - 190850796 ATTAAATAATATGAAGAAAGAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104675 24 - 14256875 ATTAAACAATATGAAGAAAGAATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999923 24 - 2196201 ATTAAATAATATCAAGAAAGAATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394668 24 - 5030052 ATTAAATAATATGAAGAAAGAATG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511157 24 - 93316391 ATTAAATAATAGAAAGAAAGAATT i micMur3.chr14 I 824 C 0 s proCoq1.NW_012145301v1 3951583 24 + 3993831 ATTAAATAATAGAAAGAAAGAATG i proCoq1.NW_012145301v1 C 0 I 52 s otoGar3.GL873580 11232925 24 - 11315646 ATTGCATAGTAAAAAGAAAGAATG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86608222 24 - 129401213 ATTAAATAATAATGAGGAAGAATG i mm10.chr8 C 0 C 0 s canFam3.chr16 16953880 24 - 59632846 ATTAAATAGATGGAGGGAAGAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447030 24 - 2520184 ATTAGATGACAGGAAGGAAGAATG i dasNov3.JH570353 C 0 C 0 a score=176349.000000 s hg38.chr4_KI270789v1_alt 117600 17 + 205944 CCCATCTGATAA---AGGTA s panTro5.chr4 192905008 17 + 194502333 CCCATCTGATAA---AGGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788680 17 + 195804263 CCCATCTGATAA---AGGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825946 17 + 4876863 CCCATCTGATAA---AGGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715146 17 + 115148730 CCCATCAGATAA---AGGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998738 18 + 190429646 CCCATCTGATAA--AAGGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941512 18 + 189454096 CCCATCTGATAA--AAGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333257 18 - 25927173 CCCATCTGATAA--AAGGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362640 18 + 4669795 CCCATCTGATAA--AAGGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320650 18 + 135778131 CCCATCTGATAA--AAGGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773325 18 - 2847728 CCCATCTGATAA--CAGGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889043 18 + 2368649 CCCATCTGATAA--AAGGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616450 17 - 190850796 CCCACCGGATAA---AAGTA i calJac3.chr3 C 0 I 311 s saiBol1.JH378165 13104699 17 - 14256875 CCCATCTGATAA---AAGCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999947 17 - 2196201 CCCATCTGATAA---AAGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394692 17 - 5030052 CCCATCTGATAA---AAGTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511181 18 - 93316391 TTCATCTGATAG--GAAAGG i micMur3.chr14 C 0 I 2 s otoGar3.GL873580 11232949 18 - 11315646 TTCATCTGATAG--GAAATA i otoGar3.GL873580 C 0 I 2 s mm10.chr8 86608246 18 - 129401213 CTTATGTGGCAA--AAGAGG i mm10.chr8 C 0 I 2 s canFam3.chr16 16953904 20 - 59632846 TTTGCCTGATAAGAAAGTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447054 20 - 2520184 TTACCCTGACAACAAAGGGA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3951607 52 + 3993831 I a score=235022.000000 s hg38.chr4_KI270789v1_alt 117617 14 + 205944 CAAAACTGACCTTA s panTro5.chr4 192905025 14 + 194502333 CAAAACTGACCTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788697 14 + 195804263 CAAAACTGACCTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825963 14 + 4876863 CAAAACTGACCTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715163 14 + 115148730 CAAAACTGACCTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998756 14 + 190429646 CAAAACTGACCTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941530 14 + 189454096 CAAAACTGACCTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333275 14 - 25927173 CAAAACTGACCTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362658 14 + 4669795 CAAAACTGACCTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320668 14 + 135778131 CAAAACTGACCTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773343 14 - 2847728 CAAAACTGACCTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889061 14 + 2368649 CAAAACTGACCTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616778 14 - 190850796 CAAAACTGATCTTA i calJac3.chr3 I 311 C 0 s saiBol1.JH378165 13104716 14 - 14256875 CAAAACTGATCTTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999964 14 - 2196201 CAAAACTGATCTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394709 14 - 5030052 CAAAACTGATCTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511201 14 - 93316391 TAAAACTGAACTTA i micMur3.chr14 I 2 I 22 s otoGar3.GL873580 11232969 14 - 11315646 TAAAACTGAACTTA i otoGar3.GL873580 I 2 C 0 s mm10.chr8 86608266 14 - 129401213 CAAGACTGACCTTA i mm10.chr8 I 2 C 0 s canFam3.chr16 16953924 14 - 59632846 CAAAACTGAACTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447074 12 - 2520184 CAAAACTGACTT-- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3951607 52 + 3993831 I a score=181993.000000 s hg38.chr4_KI270789v1_alt 117631 28 + 205944 AAATGACTTAGCACTGG----AAAGAAAAAAA s panTro5.chr4 192905039 28 + 194502333 AAATGACTTAGCACTGG----AAAGAAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788711 28 + 195804263 AAATGACTTAGCACTGG----AAAGAAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3825977 28 + 4876863 AAATGACTTAGCACTGG----AAAGAAAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715177 28 + 115148730 AAATGACTTAGCACTGG----Gaaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998770 25 + 190429646 AAATGACTTAGCACTGG-------AAAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941544 28 + 189454096 AAATGACTTAGCACTGG----aaaaaaaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333289 24 - 25927173 AAATGACTTAGCACTGG--------AAAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362672 32 + 4669795 AAATGACTTAGCACTGGaaaaaaaaaaaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320682 26 + 135778131 AAATGACTTAGCACTGG------aaaaaaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773357 25 - 2847728 AAATGACTTAGCACTGG-------AAAAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889075 24 + 2368649 AAATGACTTAACACTGG--------AAAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616792 25 - 190850796 AAATGACTTAGAACTGA-------TTAAAAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104730 25 - 14256875 AAATGACTTAGAACTGA-------TTAAAAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 999978 25 - 2196201 AAATGACTTAGAACTGG-------TTAAAAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394723 25 - 5030052 AAATGACTTAGAACTGA-------TTAAAAGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11232983 21 - 11315646 GAGTGAC--AATACTGT-------CTAAAC-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86608280 13 - 129401213 GAAGGACTTACAA------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16953938 25 - 59632846 GAGAGATTTAACACTGC-------TTAAAAAC i canFam3.chr16 C 0 I 4 s dasNov3.JH570353 1447086 26 - 2520184 GAATGACTGA-TACTGG----TGATAAAAAG- i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3951607 52 + 3993831 I e micMur3.chr14 17511215 22 - 93316391 I a score=13365.000000 s hg38.chr4_KI270789v1_alt 117659 1 + 205944 A s panTro5.chr4 192905067 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788739 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826005 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715205 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998795 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941572 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333313 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362704 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320708 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773382 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889099 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616817 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104755 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000003 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394748 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3951659 1 + 3993831 A i proCoq1.NW_012145301v1 I 52 C 0 s otoGar3.GL873580 11233004 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86608293 1 - 129401213 G i mm10.chr8 C 0 C 0 e micMur3.chr14 17511215 22 - 93316391 I e dasNov3.JH570353 1447112 0 - 2520184 C e canFam3.chr16 16953963 4 - 59632846 I a score=2173519.000000 s hg38.chr4_KI270789v1_alt 117660 156 + 205944 AA----------GAGGCTACAAATTTTTGGTTACTGAAGAGCCTTTTAAATAAGATTATATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAATAAGAAAACCCCTAATCTTCCTCCTAACTAAATGATTATATGATTTGATGAGTGAGGATTAAGTTCTGCTTTT s panTro5.chr4 192905068 157 + 194502333 AA--------AAGAGGCTGCAATTTTTTGGTTACTGAAGGGCCTTTTAAATAAGATTATATTAAAACAGTGAGTAGATCTCTACAA-GCAGAATAAGAAAACCCCTAATCTTCCTCCTAACTAAATGATTATATGATTTGATGAGTGAGGATTAAGTTCTGCTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788740 156 + 195804263 AA---------AGAGGCTGCAAATTTTTGGTTACTGAAGAGCCTTTTAAATAAGACTATATTAAAACAGTGAGTAGATCTCTCCAA-GCAGAATAAGAAAACCCCTAATCTTCCTCCTAACTAAATGATTATATGATTTGATGAGTGAGGATTAAGTTCTGCTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826006 157 + 4876863 AA---------AGAGGCTGCAAATTTTTGGTTACTGAAGAGCCTTTTAAATAAGATTATATTAAAACAGTGGGTAGATCTCTCCAAAGCGGAATAAGAAAACCCCTAATCTTCCTCCTAACTAAATGATTATATGATTTGATGAGTGAGGATTAAGTTCTGCTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715206 166 + 115148730 aaaaaaaaGCAAGAGGCTGCAAATGTTTGGTTACTGAAGAGCCTTTTAAATAAGATTATATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAACAAGGAAACCACTAGTCTTCCTCCTAACTAAATGATTGTATGATTTTATGAGTGAGGATTAAGTTCTGCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998796 157 + 190429646 AA---------AAAGGCAGCAAAATTTTGGTTACTAAAGAGGTTTTTAAATAAGATTCTATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAACAAGAAAACCACTAGTCTTCCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941573 157 + 189454096 aa---------aaaGGCAGCAAAATTTTGGTTACTAAAGAGGTTTTTAAATAAGATTCTATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAACAAGAAAACCACTAGTCTTCCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333314 157 - 25927173 AA---------AAAGGCAGCAAAATTTTGGTTACTAAAGAGGTTTTTAAATAAGATTCTATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAACGAGAAAACCACTAGTCTTCCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362705 157 + 4669795 aa---------aaaGGCAGCAAAGTTTTGGTTACTAAAGAGGTTTTTAAATAAGATTCTATTAAAACAGTGGGTAGATCTCTCCAAAGCAGAACAAGAAAACCACTAGTCTTCCTCCGTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320709 154 + 135778131 aa---------aaaaaaaGCAAAGTTTTGGTTACT---GAAGTTTTTAAATAAGATTCTATTAAAACGGTGGGTAGATCTCTCCAAAGCAGAACAAGAAAACCACTAGTCTTCCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773383 157 - 2847728 AG---------AAAGGCAGCAAAATTTTGGTTACTAAAGAGGTTTTTAAATAAGATTCTATTAAAACAGTGGATAGACTTCTCCAAAGCAGAACAAGAAAACCACTAGTCTTCCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889100 157 + 2368649 AA---------AAAGGCAGCAAAGTTTTGATTACTGAAGAGCTTTTTAAATAAGATTCTATTAAAACAGTGGGTAGGTCTCTCCAAAGCAGAACAAGAAAATCACTAGTCTTTCTCCTTACTAAATGATTGTATGATTTTGTGAGTGAGGATTAAGTTCTGCTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616818 157 - 190850796 AA---------AGAGGATGAAAGTTTTGGGTTACCGACGAGCTTTTAAAATAAGACTATATTAAAACAATGGGTAGATCTCTCCAAAGCAGAATGAGAAAGCCACTAATCTTCCTCCTAACTAAACGATTATGTGATTTTATGATAGAGAATTAAGTTCCACTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104756 151 - 14256875 AA---------ACAGGATGCAAGTTTTGGGTTACTGATGAGCTTTTAAAATAAGACTATATTAAAACAATGGGTAGATCTCTCCAAAGC------AGAAAACCACTAATCTTCCTCCTAACTAAATGATTATGTGATTTTATGATAGAGAATTAAGTTCTGCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000004 151 - 2196201 AA---------AGAGGATACAAGTTTTGGGTTACTGACAAGCTTTTAAAATAAGACTACATTACAACAATGGGTAGATCTCTCCAAAGC------AGAAAACCGCTAACCTTCCTCCTAACTGAATGATTATGTGATTTTATGATAGAGAATTAAGTTCTGCTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394749 157 - 5030052 AA---------ACAGGATGCCAGTTTTGGGTTACTGACGAGCTTTTAAAATAAGACTATATTAAAACAATGGGTAGATCTCTCCAAAGCAGAATGAGAAAACCACTAACCTTCTTCCTAACTAAATGATTCTGTGATTTTATGATAGAGAATTAAGTTCTGCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511237 155 - 93316391 -A---------AGAGGCTGCAAGTTTTTG-TTACTGCAGAGCACTTTAAATGAGACTATATTAAAATGATAAGTAGATCTTTCCAAAGCAGAACAAGAAAACTACTCATCTTCCTCCTAATTAAATGATTATATGATTTTATGAGAGAAGATTGAGTTCTGATTTT i micMur3.chr14 I 22 C 0 s proCoq1.NW_012145301v1 3951660 155 + 3993831 -A---------AGAGGCCGCAAATTTTTG-TAACTGGAGAGCACTTTAAATGAGACTGTATTAAAATGATAAGTAGATCTTTCGAAAGCAGAACAAGAAAACCACTCATCTTACTCCTAATTAAATGATTATATAATTTTATGAGAGAAGATTGAGTTCTGATTTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233005 147 - 11315646 -A---------AGAGGCTGCAAATTTTTA-TTACTGAAGAGCATTTTAAATGAGACTACATT-AAATGCTAAGTAGATCCTTCCAAAGCAGAATAAGAA------TAATCTTCCTCCCAATTAAATGATTATATGATTTTA-GAGAAAAGATTAAGTTCTGATTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86608294 152 - 129401213 -A---------AGAGGTGGCCGACATTTTGTTATTCAAGACCCTCTTAATTGAGATGACATTAAAGTGATGGGTAGAACTCCCCAAAGCCATAACAGCAATTTGCCAATCTTTCTCA-AATTCAATATTTATATAATTTTATGAG---AGATTATAGTTTGCTTtt i mm10.chr8 C 0 I 615 s canFam3.chr16 16953967 147 - 59632846 --------------CACTGAAAATTTTTTATTACTAAAGAGCATTTTAAATGAAACAATATTAAAATGG-----AGATTTCCCCAAAGCAGAACAAGGGAACCACTAATTTCCCTTCTAATTAAATGATTATATAATTTTATGAGAGCAGGTTTAGTTCTGTTTTT i canFam3.chr16 I 4 C 0 s dasNov3.JH570353 1447112 152 - 2520184 ------------GAGGCTATACATTTTTTGTTACTCTAGAAG-TTTTAAGTGAGACTACA-TGAAATGTGGAGTAGATATCCCCAAAGCAGAACAAGAAAACCACTGATCTTCCTCCTAATTAAATGATTACATGGTTTTATTAGAGAAGATTAAGTTCTGCTTTA i dasNov3.JH570353 C 0 C 0 a score=209660.000000 s hg38.chr4_KI270789v1_alt 117816 11 + 205944 AAATATAATTG s panTro5.chr4 192905225 11 + 194502333 AAATATAATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788896 11 + 195804263 AAATATAATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826163 11 + 4876863 AAATATAATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715372 11 + 115148730 AAATATAATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998953 11 + 190429646 AAATATAATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941730 11 + 189454096 AAATATAATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333471 11 - 25927173 AAATATAATTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362862 11 + 4669795 AAATATAATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320863 11 + 135778131 AAATATAATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773540 11 - 2847728 AAATATAATTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889257 11 + 2368649 AAATATAATTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616975 11 - 190850796 AAATATAATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104907 11 - 14256875 AAATATAATTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000155 11 - 2196201 AAATATAATTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394906 11 - 5030052 AAATATAATTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511392 11 - 93316391 AAATATAATTG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3951815 11 + 3993831 AAATATAATTG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233152 11 - 11315646 AAATACAATTG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16954114 11 - 59632846 AAATATAATTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447264 11 - 2520184 AAATATAATTG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86608446 615 - 129401213 I a score=7331908.000000 s hg38.chr4_KI270789v1_alt 117827 467 + 205944 CTGGGTaatatgaatataaaccaaatatgtaaaatttaagat---acaaa--gatcaatatTCCCAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAGAAGAAGA----TAATAGGCATAA--CAACTATTGTGAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGCAATTATTCTTAGCAGTGAGAAAC--ATGAGTCTCACAGAATACATTTAAGTCTTCACTTTGATTTACAACCTCCAGTGTTAATTAAACAAATGCCAACTATGCTAATAGTCTGGAAATCCTTTGACAAATACTGAAAGAAATGACAGGTCTGGCACATACACA-TATAGATGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTTACAGATTTGGCCTTATAATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAATGTTGTCTAT s panTro5.chr4 192905236 467 + 194502333 CTGGGTAATATGAATATAAACCAAATACGTAAAATTTAAGAT---ACAAA--GATCAATATTCCCAATTCTAAAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAGAAGAAGA----TAATAGGCATAA--CAACTATTGTGAAGTTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGCAATTATTCTTAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAACCTCCAGTGTTAATTAAACAAATGCCAACTATGCTAATAGTCTGGAAATCCTTTGACAAATACTGAAAGAAATGACAGGTCTGGCACATACACA-TATAGATGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTTACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGTTGTCTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192788907 467 + 195804263 CTGGGTAATATGAATATAAACCAAATACGTAAAATTTAAGAT---ACAAA--GATCAATATTCCCAATTCTAAAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAGAAGAAGA----TAATAGGCATAA--CAACTATTGTGAGGTTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGCAATTATTCTTAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAACCTCCAGTGTTAATTAAACAAATGCCAACTATGCTAATAGTCTGGAAATCCTTTGACAAATACTGAAAGAAATGACAGGTCTGGCACATACACA-TATAGATGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTTACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGTTGTCTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826174 471 + 4876863 CTGGGTAATATGAATATAAACCAAATACGTAAAATTTAAGAT---ACAAA--GATCAATATTCCCAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAGAAGAAGATAATTAATAGGCATAA--CAACTATTGTGAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGCAATTATTCTTAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAACCTCCAGTGTTAATTAAACAAATGCCAACTATGCTAATAGTCTGGAAATCCTTTGACAAATACTGAAAGAAATGACAGGTCTGGCACATACACA-TATAGATGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTTACAGATTTGGCCTTATAATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAATGTTGTCTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715383 424 + 115148730 CTGGGTAATATGAATATAAACCAAATACGTAAAATTTAAGAC---AAAAA--GATCAATATTCCTAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGAAGATAATTAATAGGCATAG--CAACTATTGTGAAATTATCCAAATTTGTACTCTTAGTTGC-------------------------------------------------C--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAACTATGCTAATAGTCTGGGAATCCTTTGACAGATACTGATAGAAATGACAGGTCTGGCACATACACG-TATAGATGGAGGCTTGCCTGATTT-TTAAAAGGCGTTTTACAGATTTGGCCTTATGATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAATGTTGTCTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188998964 468 + 190429646 CTGGGTAATATGAAAATAAACCAAATCCGTAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCACCTAATTGTAGAAAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCAGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCATTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187941741 468 + 189454096 CTGGGTAATATGAAAATAAACCAAATCCGTAAAGTTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCACCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCAGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCATTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333482 468 - 25927173 CTGGGTAATATGAAAATAAACCAAATCCGCAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCATCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCAGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3362873 468 + 4669795 CTGGGTAATATGAAAATAAACCAAATCCATAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCACCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CAACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCGGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134320874 465 + 135778131 CTGGGTAATATGAAAATAAACCAAATCTGTAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCACCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAGATTTGTGCTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCGGTTATTCT---CAGTGAGAAAC--AGGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGTGTTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2773551 468 - 2847728 CTGGGTAATATGAAAATAAACCAAATCCGTAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATTTGTGTCACCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--ATAAAGTGCGGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889268 468 + 2368649 CTGGGTAATATGAATATAAACCAAATACGTAAAATTTAAGAT---AAAAA--GATCAATATTCTCAATTCTATAAAATCTGTGTCACCTAATTGTAGATAATAAAATA-TTTTATGTATTT-TTTAAAAGATAA---TTAATAGGCATAA--CGACTATTGTCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGCGGTTATTCTCAGCAGTGAGAAAC--ATGAGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAATGAATGCCAAGTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGACGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTAACAGATTTGGCCTTATAATAC-TTATTCTGTAACTATTCATTTTATCCTGGAAAATGATGTCTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189616986 448 - 190850796 CTGGGTAATATGAATAAAAACAAAATATGTAGGATTTAAGAT---AAAAA--GATCAGTATGCCCAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTTTTTCTTTAAAAGAATA----TAATAGGCATAA--CAACTATTGCCAAATTATCCAAATTTGTACTCTTCGTTGCCAATTTTCAGTTCTTT--AGAAAGTGTAATCATTCTTAGCAGTGAGAAAT--GTAAGTCTCACAGGGTTCATTT--------------------AAGCTTCAGTGTTAATTAAACGAATGCCAGCTATGCTAATAGTCTGGAAACCCTTTGACAGATATGGATGGAAATGACAGGTCTGGCACATGCACA-TGTGGATGGAGGCTTGCCTGACTT-TTAAGAGGCATTTTACAGATTTGGCCCTCTAATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAACGTGGTCTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13104918 472 - 14256875 CTGGGTAATATGAATAAAAACCAAATATGTAGGATTTAAGAT---AAAAA--TATCAATATTCCCAATTCTGTAAAATTTGTGTCAACTAATTGTAGataataaaata-ttttatgtttttctttaaaagaatataattaataGGCATAA--AAACCATTGCCAAATGATTCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGTAATTATTCTTAGCAGTGAGAAAT--ATAAGTCTCACAGGGTTCATTTAAGTCTTCACTTTGATTTACAAGCTTCAGTGTTAATTAAACGAATGCCAACTATACTAATAGTCTGGAAATCCTTTGACACATACAGATAGAAATGACAGGTCTGGCACGTACACA-TATAGATGGAGGCTTGCCTGATTT-TTAAGAGGCGTTTTACAGACTTGGCCATCTAATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAATGTGGTCTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000166 459 - 2196201 CTGGGTAATATGAATAAAAACCAAATATGTAGGATTTAAGAT---AAAAA--GATCAATATTCCCAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTTTTTCTTTAAAAGAATATAATTAATAGGCATAA--CAACTATTGCCAAATTATCCAAATTTGTACTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAAGTGTAATTATTCTTAGCAGTGAGAAAT--ATACGTCTCACAAGGTCCATTTAAGTCTTCACTTTGATTTACAAGCTCCAGTGTTAATTAAACGAGTGCCAACTATGCTAATAGTCTGGAAATCCTTTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TACAGATGGAGGCTTGCCTGA--------------TTTTACAGATTTGGCCATCTAATGC-TTACTCTATAACTATTCATTTTATCCTGGAAAATGTTGCCTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3394917 472 - 5030052 CTGGGTAATATGAATAAAAACCAAATATGTAGGATTTAAGAT---AAAAA--GATCAGTATTCCCAATTCTATAAAATTTGTGTCAACTAATTGTAGATAATAAAATA-TTTTATGTTTTTCTTTAAAAGAATATAATTAATAGGCATAA--CAACTATTGCCAAATTATCCAAATTTGTTCTCTTAGTTGCCAATTTTCAGTTCTTT--AGAAACTGTAATTATTCTTAGCAGTGAAAAAT--ATAAGTCTCACAGGGTTCATTTAAGTCTTCACTTTGATTTACAAGCTTCAGTGTTAATTAAATGAATGCCAACTATGCTAATAGTCTGGAAATCCTCTGACAAATACGGATAGAAATGACAGGTCTGGCACATACACA-TATAGATGGAGGCTTGCCTGATTT-TAAAGAGGCGTTTTACGGATTTGGCCATCTAATAC-TTATTCTATAACTATTCATTTTATCCTGGAAAATGTTGTCTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511403 477 - 93316391 CTGGGTAATATGAATATGAACCAAATATGGAGGATTTGAAAT---AAAAAAGGATCAGTATTCCCAATTCTATAAAATTTGTGCCAACGAATTGTAGATAATAAAATATTTTTATGTACTTTTTAAAAAGAAGATAATTAATAGACATAA--CAACTATTGTCAAATTAGCCAAATTTGCACTCTTGGTTTCCAATTTTCAGTTCTCTCCAGAAAGTGCAATTATTCTTCACAGTGAGGAAT--ATGTGTCTCACAGGATACATTTAAGTCTTCACTTTGATTTACAAGCTTCTGTGTTAATTAAACTAATGCCAACTATACTAACAGTCCTGAAATCCTTTGACAAATACTGATGTAAATGATAGGTCTGGCACAGACATG-TATAGATGGAGGCTTGCCTGATTT-TTAAAAGGTACTTTACAGATTTAGCTATATAATAC-TTAATCTGCAACTATTCATTTTATTCTGGAAAATATTGTCTAG i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3951826 467 + 3993831 CTAGGTAATATGAATATGAACCAAATATGGAGGAATTGAAAT---AAAAAAGGATCAGTATTCCCAATTCTATAAAATTTGTTCCAACTAATTGTAGATAATAAAATATTTTTATGTACTTTTTAAAAAGAAGATAATTAATAGACATAA--CAACTATTGT---------CAAATTTGCACTCTCAGTTTCTAATTTTCAGTTCTCTCCAGAAAGTGCAATTATTCTTCACAGTGAGGAAT--ATGTGTCTCACAGGATACATTTAACTCTTCACTTTGATTTACAAGCTTCAGTGTTAATTAAACTAATGCCAACTACACTAAC-GTCTGGAAATCCTTTGACAAATACTGATATAAATGATACGTCTGGCACAGACATG-TATAGATGGAGGCTTGCCTGATTT-TTAAAAGGTACTTTACAGATTTGGCTATATAATAC-TTAATCTGTAACTATTCATTTTGTCCTGGAAAATATTGTCTAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233163 473 - 11315646 CTAGATAGTATGAATATAAACCGAATATGGAGGATTTGAAAT---GAAAAAGGATAAGTATTCCCAATTCTGTAAAATTTGTGCCAAATAATTGTAGATAATAAAATA-TTTTATGTACTTTTTTAGAAGAAGATAATTAATAGGCATGA--AAACAATT-TCAAATTCGCCAAAATCACCCTCTTGGTTTCCAATTTCCAGTTCTCTCCAGAAAGTGCAATTATTTTTTGTGGGGAGAAAT--ATGCGTCTCACAGGATGCATTTAAGTCTTCACTTTGATTTACAAGCTTCAGTGCTAATTAAGTCAATGCCTACCATGCTAACAGTCTGGGAATCCTTTGACAACTA-TGATGTAAATGGTGGGTCTGGCACAGATGCA-TGTAGATGGAGGCTTGCTTGATTT-TTAAAAGGTACTTTATAGATTTGGCTATGTAATAC-TCAATCTATAACTATTCATTTTA-CCTGGAAAATGTTGTTTAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86609061 474 - 129401213 CTAGATAGTATATGTCTGATCCAAATACAGTGAATTTGAAGTTCAAAAAA--AATCAATATTCTCAATTCAGTAAAATTTGTATTACCTAATTATAGATAATAAAATA-GATTAAATTCTT-TCTTTAATAAGCCACTTAATTGACATAAGTTGGCCATTG-CAAATTACTCAAACTT---CCATTAACTTTCAATTTTCAATTCTTGACAGAATGTGCAATTATTTTTTGCGGTGAAAAGT--ATGAGTCTCATAGGATCTGAGGAAATCTTCTCTTTGATTTACAAGCTTCACTGTTAATTATACTCATACCAATTATGCTAACAATTTGAAACTTCTTTGGCAAATACCAGTATGAATGACAGGTCTGGAATAAATACACTGTAGATCAAGACTTGCCAAATTTATCAAACAGAAATTTACATATATGGTCATATAACAC-CTAGCTTGTAAGTACTCA--CTATTATAGAAAATTTGTTCTAT i mm10.chr8 I 615 I 2534 s canFam3.chr16 16954125 472 - 59632846 CTGGGTAATTTGAGTAAGAACCAAATATGAAAGATTTGAAAT---AAAAAAGTGTCAGTAATACCAACTCCATAGTATCTGTGTCAACTGATTGTAGataataaaata-ttttatatatttCTTTAAAGGGAGATAATTAGCAGACATAA--CAACTATTTTCAAATTAGCCAAATTTGCACTCTTGGTTTGCAATTTTCAGTTCTCTCCAGAAAGCACAATTATTCTTAGCAGTTAGTAACAAATAAATCTCAAAGGATACATGGAAATCTTCACTTTGATTTATAAGCTTCAGTGTTAATTAAACTAATGCCAACTATGCTTACAGTTTGGAAATCCTTTGACCAATGT------AAATGACAGATCTGATTTATGCACA-AGTAGATGGAGGCTTGACTTATTT-TTAAAAGGTATTTTACAGATTTGACCATATAATAT-TTAATCTATAACTGCTCATTTTATCTTGAAAAATGTTGTCTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447275 443 - 2520184 CTGGGTA---TGGAAATAAA-------------------------CAAAG--GATCAATATTCCCAATTCTATAAAGTCTGTGTCCATTGACTGTACATAATGAAATA-TTTTATGTATTT-TTTAAAGGAAGGTAATTAGAGGCTGTAA--AAACCATTGTCAAATTAGCCAAATTTGCACTCCTGGTTTCCAATTATCAGTTCTTTCCAATAATTGCAATTATTCTTAGCAGCCAGAAAT--AT-AGTCTCTCAGGATATATGCATATATTCACTTTGATTTAAAAAGTTCAGTGTTAATTAAACTAATGCCAAGTATGTCTACAGTCTGGAAATC---TGACAAATACCAAACTAAACGGCATCTACAGAA-ATACACA-AATACATGGAAGCTTGTCTGATTT-TGAAAAGGCATTTTACAGATTTGAACATACAATACATTGGTCTATAGCTGCTCATTTTGTCTTGGAAAATG-TGTCTAT i dasNov3.JH570353 C 0 C 0 a score=1628988.000000 s hg38.chr4_KI270789v1_alt 118294 107 + 205944 AAAGTTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACATTTCACAGGAATAAGTCCACTATTGCTA-AG-AAAAA-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA s panTro5.chr4 192905703 107 + 194502333 AAAGTTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACATTTCACAGGAATAGGTCCACTATTGCTA-AG-AAAAA-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789374 107 + 195804263 AAAGTTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACATTTCACAGGAATAGGTCCACTATTGCTA-AG-AAAAA-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826645 107 + 4876863 AAAGTTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACATTTCACAGGAATAAGTCCACTATTGCTA-AG-AAAAA-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715807 107 + 115148730 AAAGTTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACATTTCACAGGAATAAGTCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999432 107 + 190429646 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942209 107 + 189454096 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24333950 107 - 25927173 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCGCAAAATGGCAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363341 107 + 4669795 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321339 107 + 135778131 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGCACTGGGGATGGAGCCCCAAAGTGGCAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774019 107 - 2847728 AAAGTTTTGGAGAGAAATTGCTCTATAGAACAAACTGACATTTCACAGGAATAAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889736 107 + 2368649 AAAGTTTTGGAGAGAAATTGCTCTGCAGAACAAACTGACATTTCACAGGAATGAATCCACTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617434 107 - 190850796 AAAATTTCGGAGAGAAATTGCTCCGTAGAACAAATTGACGTTACATAGGAGTAAGTCCATTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13105390 107 - 14256875 AAAATTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACGTTACACAGGAATAAGTCTATTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAACCCCAAAATGGCACA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000625 107 - 2196201 GAAATTTTGGAGAGAAATTGCTCTGTAGAACAAATTGACGTTACACAGGAATAAGTCCATTATTGCTA-AG-AAAAG-TGGTCCTGGGGATGGAGCCCCAAAATTGCACG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395389 107 - 5030052 AAAATTTTGGAGAGAAATTGCTCTGTAGAACAAATTGATGTTACACAGGAATAAGTCCATTATTGCTA-AG-AAAAG-TGGTACTGGGGATGGAGCCCCAAAATGGCACA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511880 106 - 93316391 AAAGTCCTAGAGATAAATTGCCTTGTAGAATAAATTGACTTC-CACAGAAATAAGTCAGTTATTGCTG-AG-AAAAG-TGGTATTGGGAATGGTGCCCCCAAATGGCAGA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3952293 103 + 3993831 AAAGTCCTGGAGATAAATTGC----TAGAATAAATTGACTTC-CACAGGAATAAGTCAATTATTGCTG-AGAAAAAG-TGGTATTGGGAATGGAGCCCCCAAATGGCAGA i proCoq1.NW_012145301v1 C 0 I 108 s otoGar3.GL873580 11233636 106 - 11315646 AAAGTCCTGAAGGGCAATTGTCCTGTAGAATAAATTGGCTTCACACAGGAACACGGCTGTTATTGCCA-AGAAAACA-TG--ACTGGGAGTGATGTCCCCAAATGGCAGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612069 104 - 129401213 AAAGTGTTGGAAAGAGATTTCCTTTTAGGTTAAATTTTCTTTTCATAAGAATAACTCAGTTATTGCTG-AG-AAAAG--GGTA--GAAGGCCAAGTTACAAAATGGTAGA i mm10.chr8 I 2534 I 7 s canFam3.chr16 16954597 108 - 59632846 AAAATCCTGGAGAGAAATCACCTTGGAGTACAAATTGGCTGTGTATAAGAATAAGTCAATTGTTCCTC-AG-AAAAATTGCTATTGAGGATAGAGCCCAGAAATGGCAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447718 108 - 2520184 AATACCCTGGCTAGCAACTGTACTGTCGAACAAATTGGCTTTATTCAGAAATAGGCCAGATATCACTGCAA-AAAGG-TTGAATTGAAGTTGGAGTCCCAAAGAGACACA i dasNov3.JH570353 C 0 C 0 a score=64208.000000 s hg38.chr4_KI270789v1_alt 118401 5 + 205944 GGCAA- s panTro5.chr4 192905810 5 + 194502333 GGCAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789481 5 + 195804263 GGCAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826752 5 + 4876863 GGCAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715914 5 + 115148730 GGAAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999539 5 + 190429646 GGCAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942316 5 + 189454096 GGCAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334057 5 - 25927173 GGCAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363448 5 + 4669795 GGCAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321446 5 + 135778131 GGCAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774126 5 - 2847728 GGCAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889843 5 + 2368649 GGCAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617541 5 - 190850796 GGCAA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13105497 5 - 14256875 GGGAA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000732 5 - 2196201 GGTAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395496 5 - 5030052 GGCAA- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17511986 5 - 93316391 AGCAA- i micMur3.chr14 C 0 I 524 s otoGar3.GL873580 11233742 5 - 11315646 AGCAA- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612180 5 - 129401213 GTTAA- i mm10.chr8 I 7 C 0 s canFam3.chr16 16954705 5 - 59632846 AGCAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447826 6 - 2520184 GGCCAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952396 108 + 3993831 I a score=242962.000000 s hg38.chr4_KI270789v1_alt 118406 25 + 205944 ACACAGCCC--TATCAACCTCTCCCAT--- s panTro5.chr4 192905815 25 + 194502333 ACACAGCCC--TATCAACCTCTCCCAT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789486 25 + 195804263 ACACAGCCC--TATCAACCTCTCCCAT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826757 25 + 4876863 ACACAGCCC--TATCAACCTCTCCCAT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715919 25 + 115148730 ACACAGTCC--TATCAACCTCTCCCAT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999544 25 + 190429646 ACACAGTCC--TATCAACCTCTCCCAT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942321 25 + 189454096 ACACAGTCC--TATCAACCTCTCCCAT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334062 25 - 25927173 ACACAGTCC--TATCAACCTCTCCCAT--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363453 25 + 4669795 ACACAGTCC--TATCAACCTCTCCCAT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321451 25 + 135778131 ACACAGTCC--TATCAACCTCTCCCAT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774131 25 - 2847728 ACACAGTCC--TGTCAACCTCTCCCAT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889848 25 + 2368649 ACACAGTCC--TATCAACCTCTCCCAT--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617546 25 - 190850796 ACTGAGTCC--CACCAGCTTCTCCCGT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13105502 25 - 14256875 GCTTAATCC--CATCAACTTCTTCTGT--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000737 24 - 2196201 GCTTAGTCC--CATCAACTTCT-CCGT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395501 25 - 5030052 ACTTAGTCC--CATCAACTTCTCCCGT--- i aotNan1.NW_018492112v1 C 0 I 35 s otoGar3.GL873580 11233747 24 - 11315646 ATTTAATCT--CATCAG-TTCTCCTAT--- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612185 25 - 129401213 ATGTAATCC--AGTTAAGTCCTGTTTT--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16954710 25 - 59632846 GCTTAATTC--CATCAGTTCTTCCTCT--- i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1447832 30 - 2520184 GTTTAGCCCAAAATCAACGTCTCCTTCCAT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952396 108 + 3993831 I e micMur3.chr14 17511991 524 - 93316391 I a score=200022.000000 s hg38.chr4_KI270789v1_alt 118431 27 + 205944 CCCCCTGTG------TACACATTAGTATAGACT- s panTro5.chr4 192905840 27 + 194502333 CCCCCTATG------TATACATTAGTATAGACT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789511 27 + 195804263 CCCCCTATG------TATACATTAGTATAGACT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826782 26 + 4876863 -CCCCTATG------TAGACATTAGTATAGACT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715944 27 + 115148730 CCCCCTATG------TACATATTAGTATAAACT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999569 27 + 190429646 CCCCCTATG------TACATATTAGTCTACACT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942346 27 + 189454096 CCCCCTATG------TACATATTAGTGTACACT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334087 27 - 25927173 CCCCCTATG------TACATATTAGTCTACACT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363478 27 + 4669795 CCCCCTATG------TACATATTAGTCTACACT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321476 27 + 135778131 CCCCCTATG------TACATATTAGTCTACACT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774156 27 - 2847728 CCCCCTATG------TACATATTAGTCTACACT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889873 27 + 2368649 CCCGCTATG------TACATATTAGTATACCCT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617571 26 - 190850796 -TCCCTGTG------GGCATATTAGCACAGACT- i calJac3.chr3 C 0 I 9 s saiBol1.JH378165 13105527 26 - 14256875 -TCCCTATG------GGCGTATTAGCATGGACT- i saiBol1.JH378165 C 0 I 9 s cebCap1.NW_016107886v1 1000761 26 - 2196201 -TCCCTATG------GGCATATTAGCATAGACT- i cebCap1.NW_016107886v1 C 0 I 9 s otoGar3.GL873580 11233771 27 - 11315646 CCTCCCGCA------CACTTATTTGCGTAGACT- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86612210 29 - 129401213 ---CCTACACTCTGCTACATATGGGTCAATAG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16954738 27 - 59632846 CCTCTCATG------CATGTGCTCTTATACATT- i canFam3.chr16 I 3 I 1 s dasNov3.JH570353 1447862 28 - 2520184 TCTCCGATG------CAAACATTTGGGTAGAGCT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952396 108 + 3993831 I e micMur3.chr14 17511991 524 - 93316391 I e aotNan1.NW_018492112v1 3395526 35 - 5030052 I a score=501501.000000 s hg38.chr4_KI270789v1_alt 118458 52 + 205944 TAGTCTGTCTTTAGGAACAACATTTTTACTGACCTGCTTTCTAAGTTGTTGG s panTro5.chr4 192905867 52 + 194502333 TAGTCTGTCTTTAGGAACAACATTTTTACTGACTTGCTTTCTAAGTCGTTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789538 52 + 195804263 TAGTCTGTCTTTAGGAACAACATTTTTACTGACTTGCTTTCTAAGTCGTTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826808 52 + 4876863 TAGTCTGTCTTTAGGAACAACATTTTTACTGACCTGCTTTCTAAGTTGTTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112715971 52 + 115148730 TAGTCTGTCTTTAGGAACAACATTTTTACTGACCTGCTTTATAACTTGTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999596 49 + 190429646 TAGTCTGTCTTTAGG---AACATTTTTACTGACCTGCTTTCTAACTTGTTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942373 49 + 189454096 TAGTCTGTCTTTAGG---AACATTTTTACTGACCTGCTTTCTAACTTGTTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334114 49 - 25927173 TAGTCTGTCTTTAGG---AACATTTTTACTGACCTGTTTTCTAACTTGTTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363505 49 + 4669795 TAGTCTGTCTTTAGG---AGCATTTTTACTGACCTGCTTTCTAACTTGTTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321503 49 + 135778131 TAGTCTGTCTTTAGG---AACATTTTTACTGACCTGCTTTCTAACTTGTTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774183 49 - 2847728 TAGTCTGTCTTTAGG---AACATTTTTACTGACCTGCTTTCTAACTTGTTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889900 49 + 2368649 TAGTCTGTCTTTAGA---AACATTTTTGCTAACCTGCCTTCTAACTTGTTGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617606 52 - 190850796 TAGTCCTTCTTCAGCAGCAACATTTTCGCCCATCTGTTTTCTAACTTGTTGG i calJac3.chr3 I 9 C 0 s saiBol1.JH378165 13105562 52 - 14256875 TAATCTTTCTTCAGGAGCAACATTTTCTCTGATCTGTTTTCTAACTTGTTGG i saiBol1.JH378165 I 9 C 0 s cebCap1.NW_016107886v1 1000796 52 - 2196201 TGGTCTTTCTTCAGGAGCAACATTTTTGCTGATCTGTTTTCTGACTTGTTGG i cebCap1.NW_016107886v1 I 9 C 0 s aotNan1.NW_018492112v1 3395561 52 - 5030052 TCGTCTTTCTTCAGGAGCAACATTCTCGCTGATCTGTTTTCTAACTTATTGG i aotNan1.NW_018492112v1 I 35 C 0 s otoGar3.GL873580 11233799 50 - 11315646 CAGTCTTTATTTGGA-GCAACATT-TCACTGAACTCCTTTCTAACTTGTGGG i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86612239 33 - 129401213 -----------TAGG-------ATCTCACTGGGCTTCTATCTAACTACAGG- i mm10.chr8 C 0 C 0 s canFam3.chr16 16954766 51 - 59632846 TAGTCTTTCTTTAGGAGTAGCGTT-TCACTAAACTCCTTCCCAACTTGTTTA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1447890 50 - 2520184 TTGACTTCTTTTAGGAGCAGCATT-CCATGGAACTCGTCTCCAGCT-GTGGG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952396 108 + 3993831 I e micMur3.chr14 17511991 524 - 93316391 I a score=891450.000000 s hg38.chr4_KI270789v1_alt 118510 67 + 205944 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCTCAGTTACGTG s panTro5.chr4 192905919 67 + 194502333 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCTCAGTTACGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789590 67 + 195804263 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCTCAGTTACGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826860 67 + 4876863 TCCCTCTTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCTCAGTTACGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716023 67 + 115148730 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCTCAGTTATGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999645 67 + 190429646 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCCCAGTTATGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942422 67 + 189454096 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTTTTGTCCCAGTTATGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334163 67 - 25927173 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCCCAGTTATGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363554 67 + 4669795 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--CTCTCTGTTGTCCCAGTTATGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321552 67 + 135778131 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--TTCTCTGTTGTCCCAGTTATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774232 67 - 2847728 TCCCTCCTCTTCCCTGGGATCTACATATCAGGGTAGTTTCATAA--CTCTCTGTTGTCCCAGTTATGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 889949 67 + 2368649 TCCCTCCTTTTCCCTGGGATCTACATATCAGGGTAGCTTCTTAA--TTCTCTGTTGTCCCAGTTATGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617658 66 - 190850796 TCCCTCTTCTTCCCTGGGATCCACATAGCAGGGTAGTCGCATAA--TTACCTGTTGTCTCAG-TGTATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13105614 66 - 14256875 TCCCTCTACCTCCCTGGGATCTACATAGCAGGCTAGTCTCATAA--TTATCTGTTGTCTCAT-TATATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000848 66 - 2196201 TCCCTCTTCCTCCCTGGGATCTACATAGCAGGGTAGTCTCATAA--TTATCTGTTGTCTCAG-TATATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395613 66 - 5030052 TCCCTCTTCTTCCCTGGGGTCTACATAGCAGGGTAGTCTCATAA--TTATCTGTTGTCTCAG-TATATG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3952504 67 + 3993831 TCCCTCCTTTTCCCTGGGATCTACATATCAGGGTAGTTTGATAA--TTCCCCTTTTTCCCAGTTATTTT i proCoq1.NW_012145301v1 I 108 C 0 s otoGar3.GL873580 11233849 51 - 11315646 TCCCTCCTCCTCCCTGGGATCTAC----------------ATAA--TTCCCTTTTGTTCAAGTTCTCTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612272 66 - 129401213 TCCCTCCTC-TCCAGCACACCCATGTATAAGCATAGTTTTGTAA--TTTGTTTTTATCCCTGTTTTCTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16954817 67 - 59632846 TCCCTCCTCTTACTTGGGACCCACATGTCAGGGTAGTTTGATAA--TTTCCTTTTGCTCTAGCTATCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1447940 69 - 2520184 TCCCTCCTCTTGCCTGGGTTCTAGATATCAGAGTAGATATCTAGATATCCCCTTTGCTCCAGTTATCTC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17511991 524 - 93316391 I a score=28081.000000 s hg38.chr4_KI270789v1_alt 118577 2 + 205944 TT- s panTro5.chr4 192905986 2 + 194502333 TT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789657 2 + 195804263 TT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826927 2 + 4876863 TT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716090 2 + 115148730 TT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999712 2 + 190429646 TT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942489 2 + 189454096 TT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334230 2 - 25927173 TT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363621 2 + 4669795 TT- i cerAty1.NW_012001672v1 C 0 I 316 s chlSab2.chr7 134321619 2 + 135778131 TT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774299 2 - 2847728 TT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890016 2 + 2368649 TT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617724 2 - 190850796 TT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13105680 2 - 14256875 TT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000914 2 - 2196201 TT- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395679 2 - 5030052 TT- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17512515 2 - 93316391 TT- i micMur3.chr14 I 524 C 0 s proCoq1.NW_012145301v1 3952571 2 + 3993831 TT- i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233900 2 - 11315646 TT- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612338 1 - 129401213 -T- i mm10.chr8 C 0 I 1 s canFam3.chr16 16954884 2 - 59632846 TT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448009 2 - 2520184 -TG i dasNov3.JH570353 C 0 C 0 a score=832961.000000 s hg38.chr4_KI270789v1_alt 118579 59 + 205944 AAAAGTAAGCATGTTCACTGAGTGATGATTTTACTTTTTAAACAACCTCATCTTTTACC s panTro5.chr4 192905988 59 + 194502333 AAAAGTAAGCATGTTCACTGAGTGATGATTTTACTTTTTAAACAACCTCATCTTTTACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789659 59 + 195804263 AAAAGTAAGCATGTTCACTGAGTGATGATTTTACTTTTTAAACAACCTCATCTTTTACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826929 59 + 4876863 AAAAGTAAGCATGTTCACTGAGTGATGATTTTACTTTTTAAACAACCTCATCTTTTACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716092 58 + 115148730 AAAAGTAAGCATGTTCACTGAGTGATGATTTTACTTTTTAAACAACCTCATC-TTTACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999714 59 + 190429646 AAAAGTGAGCATGTTCACTGAGTAGTGATTTTACTTTTTAAACAACCTCATCTTTTACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942491 59 + 189454096 AAAAGTGAGCATGTTCACTGAGTAGTGATTTTACTTTTTAAACAACCTCATCTTTTACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334232 59 - 25927173 AAAAGTGAGCATGTTCACTGAGTAGTGATTTTACTTTTTAAACAACCTCATCTTTTACC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363939 59 + 4669795 aaaaGTGAGCATGTTCACTGAGTAATGATTTTACTTTTTAAACAACCTCATCTTTTACC i cerAty1.NW_012001672v1 I 316 C 0 s chlSab2.chr7 134321621 56 + 135778131 AAAAGTGAGCATGTTCACTGAGTAATGATTTTACTTTTTA---AACCTCATCTTTTACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774301 59 - 2847728 AAAAGTGAGCATGTTCACTGAGTAATGATTTTACTTTTTAAACAACCTCATCTTTTACC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890018 59 + 2368649 AAAAGGGAGCATGTTCACTGAGTAATGATTTTACTTTTTAAACAACCTCATCTTTTACC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189617726 58 - 190850796 AAAAGTGAGCATGTCCCCTGAGTGATGAT-TCACTTTGTAAACAACCTCGTCTCTTACC i calJac3.chr3 C 0 M 252 s saiBol1.JH378165 13105682 59 - 14256875 AAAAGTAAGCATGTCCTCTGAGTAATGATGTTACTTTTTAAACAACCTCATCTTTTACC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000916 59 - 2196201 AAAAGTGAGCATGTCCTCTGAGTAATGATTTTACTTTTTAAGCAACCTCATCTTTTACC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395681 59 - 5030052 CAAAGTAAGCATGTCCTCTGAGTAATGATTTTACTTTTTAAATAACCTCATCTTTTACC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17512517 59 - 93316391 AAAAGTAATCATATCCACTAAGTTGTGATTTTACTTTTTAGACAATTCCATATCTTCCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3952573 59 + 3993831 AAAAGTAACCATATCCACTAAATCATGATTTTACTTTTTAGACAATCCCATATCTTCCC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233902 59 - 11315646 AAAAGTAGCCATATCCACTAAGTCTTGATTTTATTTTTCAGACTACCCCATATCTTCCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86612340 57 - 129401213 AGAAGCAACCACATCTACT--GTTTTAATATTAGTTGCTAAGTAACCGCACATCTTGTC i mm10.chr8 I 1 C 0 s canFam3.chr16 16954886 59 - 59632846 AAACATAACCATATATATTAAGTCTTGATTTTACTTTTTAAATAGTCTCCTACTTTACC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448011 45 - 2520184 AAGCTTAACTATATCCACTAAGT----------CTTC----ACAGTCCCATACCTTACT i dasNov3.JH570353 C 0 C 0 a score=508731.000000 s hg38.chr4_KI270789v1_alt 118638 38 + 205944 GTACCATCAGTTATATTAAATATGACATTTAAGGTTTT s panTro5.chr4 192906047 38 + 194502333 ATACCATCAGTTTTATTAAATATGACATTTAAGGTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789718 38 + 195804263 ATACCATCAGTTTTATTAAATATGACATTTAAGGTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3826988 38 + 4876863 GTACCATCAGTTATATTAAATATGACATTTAAGGTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716150 38 + 115148730 ATACCATGAGTTATATTGAATATGATATTTAAGGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999773 38 + 190429646 TTACCATCAGTTATATTAAATATGATATTTAAGGTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942550 38 + 189454096 TTACCATCAGTTATATTAAATATGATATTTAAGGTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334291 38 - 25927173 TTACCATCAGTTATATTAAATATGATATTTAAGGTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3363998 38 + 4669795 TTACCATCAGTTATATTAAATATGATATTTAAGGTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321677 38 + 135778131 TTACCATCAGTTATATTAGATATGATATTTAAGGTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2774360 38 - 2847728 TTACCATCAGTTATATTAAATATGATATTTAAGGTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890077 38 + 2368649 GTACCATCAGTTATATTAAATATGATATTTAAGGTTTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13105741 38 - 14256875 ACATCATCAGTTATATTATATATGATATTTAAGGTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1000975 38 - 2196201 ACACCATCAGTTATATTATATATGATATTTAAGATTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395740 33 - 5030052 ACACCATCAG-----TTATATATGATATTTAAGGTTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17512576 38 - 93316391 ATGCCATCAGTTATATTAAATATGATATTGAAGATTCC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3952632 38 + 3993831 ATGACATCAATTATATTAAATATTATATTGAAGATTCT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11233961 38 - 11315646 ACGCCGTCAGTTATACTTAACATAAAATTGAAGATTCT i otoGar3.GL873580 C 0 I 131 s mm10.chr8 86612397 38 - 129401213 ATGTCATCAGTTATATTTATTATGATACTGAATGTTCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16954945 38 - 59632846 ATTCCAGGAATTATATTCAATATTATATTCAAGATTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448056 38 - 2520184 CTGCTATCAGTTACAGCCAATATGATAATGAAGATTCT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M a score=222389.000000 s hg38.chr4_KI270789v1_alt 118676 16 + 205944 AAAAGTGGAGTTAGAA s panTro5.chr4 192906085 16 + 194502333 AAAAGTGGAGTTAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789756 16 + 195804263 AAAAGTGGAGTTAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827026 16 + 4876863 AAAAGTGGAGTTAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716188 16 + 115148730 AAAAGCAGAGTTAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999811 16 + 190429646 AAAAGTGGAGTTAGAA i rheMac8.chr5 C 0 I 2 s macFas5.chr5 187942588 16 + 189454096 AAAAGTGGAGTTAGAA i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24334329 16 - 25927173 AAAAGTGGAGTTAGAA i macNem1.NW_012013133v1 C 0 I 2 s cerAty1.NW_012001672v1 3364036 16 + 4669795 AAAAGTGGAGTCAGAA i cerAty1.NW_012001672v1 C 0 I 2 s chlSab2.chr7 134321715 16 + 135778131 AAAAGTGGAGTTAGAA i chlSab2.chr7 C 0 I 2 s manLeu1.NW_012102221v1 2774398 16 - 2847728 AAAAGTGGAGTCAGAA i manLeu1.NW_012102221v1 C 0 I 918 s colAng1.NW_012116221v1 890115 16 + 2368649 AGAAGTGGAGTTAGAA i colAng1.NW_012116221v1 C 0 I 2 s saiBol1.JH378165 13105779 16 - 14256875 AAAAGATGGGTTAGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1001013 16 - 2196201 AAAAGTGGGGTTAGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3395773 16 - 5030052 AAAAGTGGGGTTAGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17512614 16 - 93316391 AAAAGTTGGGTTAGAA i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3952670 16 + 3993831 AAAAGTAGGGTTAGAA i proCoq1.NW_012145301v1 C 0 C 0 s mm10.chr8 86612435 16 - 129401213 AAATGTGGATCTAGAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16954983 16 - 59632846 AAAAATGAATTTAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448094 16 - 2520184 AAAAATAGGATTAGAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M e otoGar3.GL873580 11233999 131 - 11315646 I a score=17290.000000 s hg38.chr4_KI270789v1_alt 118692 1 + 205944 A s panTro5.chr4 192906101 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789772 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827042 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716204 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999829 1 + 190429646 A i rheMac8.chr5 I 2 C 0 s macFas5.chr5 187942606 1 + 189454096 A i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24334347 1 - 25927173 A i macNem1.NW_012013133v1 I 2 C 0 s cerAty1.NW_012001672v1 3364054 1 + 4669795 A i cerAty1.NW_012001672v1 I 2 C 0 s chlSab2.chr7 134321733 1 + 135778131 A i chlSab2.chr7 I 2 C 0 s manLeu1.NW_012102221v1 2775332 1 - 2847728 A i manLeu1.NW_012102221v1 I 918 C 0 s colAng1.NW_012116221v1 890133 1 + 2368649 A i colAng1.NW_012116221v1 I 2 C 0 s saiBol1.JH378165 13105795 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1001029 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 I 4676 s aotNan1.NW_018492112v1 3395789 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17512630 1 - 93316391 A i micMur3.chr14 C 0 I 3182 s proCoq1.NW_012145301v1 3952686 1 + 3993831 A i proCoq1.NW_012145301v1 C 0 I 3342 s mm10.chr8 86612451 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16954999 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448110 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M e otoGar3.GL873580 11233999 131 - 11315646 I a score=35293.000000 s hg38.chr4_KI270789v1_alt 118693 4 + 205944 GCTA s panTro5.chr4 192906102 4 + 194502333 GCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789773 4 + 195804263 GCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827043 4 + 4876863 GCTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716205 4 + 115148730 ACTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999830 4 + 190429646 ACTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942607 4 + 189454096 ACTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334348 4 - 25927173 ACTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3364055 4 + 4669795 ACTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321734 4 + 135778131 ACTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2775333 4 - 2847728 ACTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890134 4 + 2368649 ACTA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13105796 4 - 14256875 ATCG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3395790 4 - 5030052 ACTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86612452 4 - 129401213 ACTA i mm10.chr8 C 0 I 1885 s canFam3.chr16 16955000 4 - 59632846 ACTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1448111 4 - 2520184 ACTG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=39135.000000 s hg38.chr4_KI270789v1_alt 118697 4 + 205944 CATA s panTro5.chr4 192906106 4 + 194502333 CATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789777 4 + 195804263 CATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827047 4 + 4876863 CATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716209 4 + 115148730 CATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999834 4 + 190429646 CATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942611 4 + 189454096 CATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334352 4 - 25927173 CATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3364059 4 + 4669795 CATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321738 4 + 135778131 CGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2775337 4 - 2847728 CATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890138 4 + 2368649 CACA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13105800 4 - 14256875 CATA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3395794 4 - 5030052 CATA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16955004 4 - 59632846 TATA i canFam3.chr16 C 0 I 98 s dasNov3.JH570353 1448115 4 - 2520184 CATA i dasNov3.JH570353 C 0 I 3543 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e mm10.chr8 86612456 1885 - 129401213 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=9100.000000 s hg38.chr4_KI270789v1_alt 118701 1 + 205944 C s panTro5.chr4 192906110 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789781 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827051 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716213 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999838 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187942615 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334356 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3364063 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134321742 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2775341 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 890142 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13105804 1 - 14256875 C i saiBol1.JH378165 C 0 I 4541 s aotNan1.NW_018492112v1 3395798 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 I 128 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=744940.000000 s hg38.chr4_KI270789v1_alt 118702 169 + 205944 tgagaggtgaagccaggcgggcttctgactcatgtggggacttggagaacttttctgtctagctggaggattataaacgcaccaatcagcactctgtgtctagctaaaggtttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcactctgtaaaatg s panTro5.chr4 192906111 169 + 194502333 Cgagaggtgaagccagccaggcttctgagtcatgtggggacttgaagaacttttctgtctagctagaggattataaacgcaccaatcagcactctgtgtctagctagaggtttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagccctctgtaaaatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789782 169 + 195804263 tgagaggtgaagccagccaggcttctgagtcatgtggggacttgaagaacttttctgtctagctagaggattataaacgcaccaatcagcactctgtgtctagctagaggtttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagccctctgtaaaatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827052 169 + 4876863 TGACAggtgaagccagccgggcttctgactcatgtggggacttggagaacttttctgtctagctagaggattataaacgcaccaatcagcactctgtgtctagctaaaggtttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcactctgtaaaatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716214 148 + 115148730 tgagaggtgaagccagctgggcttctgggtcgtgtggcgacttggagaac----ctgtctagctagaggattataaacgcaccaatcagcactttg----------------taaaaatggaccaatcagcactctgt-aaaatggaccaatcagcactctgtaaaatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 188999839 146 + 190429646 Tg--aggagaagccagctgggctcctgagtcgtgtggggacttt---------------------gaggattataaacacacccatcagcactctgtgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcgctctgtaaaatg i rheMac8.chr5 C 0 I 3969 s macFas5.chr5 187942616 145 + 189454096 Tg--aggagaagccagctgggcttctgagtcgtgtggggacttt---------------------gaggattataaacacacccatcagcactctgtgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcgctctgtaaaat- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24334357 146 - 25927173 Tg--aagagaagccagctgggcttctgagtcgtgtggggacttt---------------------gaggattataaacacacccatcagcactctgtgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcgctctgtaaaatg i macNem1.NW_012013133v1 C 0 I 3927 s cerAty1.NW_012001672v1 3364064 146 + 4669795 Tg--aggagaagccagctgggcttctgagtcgtgtggggacttt---------------------gaggattataaacacacccatcagcactctgtgtctacctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcgctctctaaaatg i cerAty1.NW_012001672v1 C 0 I 3944 s chlSab2.chr7 134321743 146 + 135778131 Tg--aggagaagccagctgggcttctgagtcgtgtggggacttt---------------------gaggattataaacacacccatcagcactctgtgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcgctctgtaaaatg i chlSab2.chr7 C 0 I 3923 s manLeu1.NW_012102221v1 2775342 145 - 2847728 Tg--aggagaagccagctgggcttctgagtcatgtggggacttt---------------------gaggattataaacacacccatcagcactctctgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaatggaccaatcagcg-tctgtaaaatg i manLeu1.NW_012102221v1 C 0 I 4327 s colAng1.NW_012116221v1 890143 146 + 2368649 Tg--aggagaagccctctgggcttctgagtcacgtggggacttt---------------------gaggattataaacacacctatcagcactctgtgtctagctaaagatttgtaaatgcaccaatcagcactctgtaaaaacggaccaatcagcactctgtaaaatg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3395799 128 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=45625.000000 s hg38.chr4_KI270789v1_alt 118871 33 + 205944 gaccaatcagtgctctgtaaaatggaccaatca s panTro5.chr4 192906280 33 + 194502333 gaccaatcagtgctctgtaaaatggaccaatca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789951 33 + 195804263 gaccaatcagtgctctgtaaaatggaccaatca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827221 33 + 4876863 gaccaatcagtgctctgtaaaatggaccaatca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112716362 33 + 115148730 aaccaatcagtgctctgtaaaatggaccaatca i nomLeu3.chr7b C 0 I 729 s colAng1.NW_012116221v1 890289 33 + 2368649 gaccaatcagtgctctgtaaaatagaccaatca i colAng1.NW_012116221v1 C 0 I 4218 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3395799 128 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e macFas5.chr5 187942761 0 + 189454096 C e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=8603.000000 s hg38.chr4_KI270789v1_alt 118904 21 + 205944 ccgctctgtaaaatgggccaa s panTro5.chr4 192906313 21 + 194502333 gcgctctgtaaaacgggccaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192789984 21 + 195804263 gcgctctgtaaaatgggccaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827254 21 + 4876863 gcgctctgtaaaatgggccaa i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187942761 6 + 189454096 --gcccag------------- i macFas5.chr5 C 0 C 0 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3395799 128 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e nomLeu3.chr7b 112716395 729 + 115148730 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=207255.000000 s hg38.chr4_KI270789v1_alt 118925 236 + 205944 tcagcaggacgtgggtgggg-ccaaataagggaataaaagctggccaccagagccaacagtagcaaccggtttgggtacc---------------tttcc---ctatgaaagct---ttctttcacttttcacaataagtcgtgggtgcttctcactctttgggtctgcactacctttatgagctgtaacgttcgtggcgagagtcggtggcttcattcttgaagtcagccagaccaagaacccaccagaaggaataa s panTro5.chr4 192906334 236 + 194502333 tcagcaggacgtgggtggggaccaaataagggaataaaagctggccaccagagccaacagtagcaaccggtttaggtacc---------------tttcc---ctgtgaaagct---ttttttcacttttcacaataaatcgtggctgcttctcactctttgggtctgcactaccgttatgagctgtaacgttcgtggcgagagtaggtggcttcattcttgaagtcagg-agaccaagaacccaccagaaggaataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790005 236 + 195804263 tcagcaggacgtgggtggggaccaaataagggaataaaagctggccaccagagccaacagtagcaaccggtttaggtacc---------------tttcc---ctgtgaaagct---ttttttcacttttcacaataaatcgtggctgcttctcactctttgggtctgcactaccgttatgagctgtaacgttcgtggcaagagtaggtggcttcattcttgaagtcagg-agaccaagaacccacccgaaggaataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827275 249 + 4876863 tcagcaggatgtgggtgggg-ccaaataagggaataaaagctggccaccagcgccaacagtagcaactggtttgggtgcctttccgtgtgaaaggtttcc---gtgtgaaaggt---ttctttcactttttgcaataagtcatggctgctttttactc--cgggtttgcactacctttatgagctgtaatgttcatggcgagagtcggtggcttcattcttgaagtcagcgagaccaagaacccaccagaaggaataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717124 214 + 115148730 tcagcagaatgtgggcgggg--caaataagggaataaatt-----------------aagtggcaacgggcttgggtcct---------------tttct--gctgcagaagct---tctctttcactctcgtaatc-----ttgctgctgctcactctttgggtctgcactactttcattagctgtaacccttgccgtgagagtccatggcttcattcttgaagtgagtgagaccaagaacccactggaaggaataa i nomLeu3.chr7b I 729 C 0 s macFas5.chr5 187942767 240 + 189454096 tcagcatgacatgggtggtg-ccaaataagggaataaaagctgaccactggcgcctgcagaggcgaccctctggggttcc---------------ctttcatggtgtggaagctttgttctttcactcttcacaataaat-attgctgctgctcactctttgggtctgtactacctttatgagctgtaacactcactgccagggtctgcagcttcattccggaagtcagcgaga-tactaacccaccaggaggaacaa i macFas5.chr5 C 0 I 103 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3395799 128 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=146764.000000 s hg38.chr4_KI270789v1_alt 119161 133 + 205944 attccagacacAATAcaatatgttgggtgagcagatcatggcacttatgtcaggaaagcttgtgtttaatcctgggtgtgccatttactaagtgtgtgaTTAGTTGTATTATATATACATACACACACACGTA s panTro5.chr4 192906570 129 + 194502333 attccagacacAATAcaatatgttgggtgagcagatcatggcacttatgtgaggaaagcttgtgtttaatcctgggtgtgccatttactaagtgtgtgaTTAGTTGTATTATATATACA----CACACACGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790241 129 + 195804263 attccagacacAATAcaatatgttgggtgagcagatcatggcacttatgtcaggaaagcttgtgtttaatcctgggtgtgccatttactaagtgtgtgaTTAGTTGTATTATATATACA----CACACACGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827524 131 + 4876863 attccagacAcaatacaatatgttgggtgagcagatcatggcacttatgtcaggaaagcttgtgtttaatcccgggtgtgccatttactaagtgtgtgaTTAGTTGTATTATATATACA--CACACACACGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717338 127 + 115148730 attccagacacaataccATATATTGGgtgaacagatcatggcact--tgtcaggaaagcttatatttaatcctgggtgtgccatttactaaatgtatgaTTAGTTCTATTATATATATA----CACACACATA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943110 121 + 189454096 attccagacac--------atATTGGGTGAACAGATCATGGTATTTAAGTTAGGAAAGCTTGTATTTTATCATGGATGTGCCATTTACTAAATGCATGATTAGTTCTATTATAGATATA----TATACACACA i macFas5.chr5 I 103 C 0 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3395799 128 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=151073.000000 s hg38.chr4_KI270789v1_alt 119294 93 + 205944 ttttttgagacagagtctcgctctggcacccaggctggaatgctgtggtgcaatctcggctcactgcaacctccgcctcccaggttcaagcga s panTro5.chr4 192906699 93 + 194502333 ttttttgagacagtctctcactctggcacccaggctggagtgctgtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790370 93 + 195804263 ttttttgagacagtctctcgctctggcacccaggctggagtgctgtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagcga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827655 93 + 4876863 ttttttgagacagagtctagctctggcacccaggctggagtgctgtggtgcaatctcggctcactgcaacctccgcctcccgggttcaagcga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717465 93 + 115148730 ttttttgagacggagtctcactctgtcacccaggctggagtgcagtggtgcaatctcggctcactgcaacctctgcctcccaggttcaagcga i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943231 93 + 189454096 ttttctgagacagagtctcactgtgtcatccaggctggagtgccatggtgcagtctcggcttactacagcctttgcctcctgggttcaagcaa i macFas5.chr5 C 0 C 0 s aotNan1.NW_018492112v1 3395927 93 - 5030052 ttttttgagatggaacctcactctgtcacccaggctggagtgcagtgacacaagctcagctcattgcaacctccacctcctgggttcaagtga i aotNan1.NW_018492112v1 I 128 C 0 e calJac3.chr3 189617784 252 - 190850796 M e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=347692.000000 s hg38.chr4_KI270789v1_alt 119387 203 + 205944 ttctcctgcc-tcagctt-cccgagtagctggggctgcaggcatgagccaccatatccagctttttttttttttttt-----------ttttttttggatttttagtagtgacagggttttgccacattgg-ccaggctggtctcgaactcctga-cctcagacgatctgcccacctcagcctcccaaagtgctgggattatagccataggccactgc s panTro5.chr4 192906792 195 + 194502333 ttctcctgcc-tcagctt-cccgagtagctggggctgcaggcatgagccaccatatccagctttttttttttttttt-------------------ggatttttagtagagacagggttttgccacattag-ccaggctggtctcgaactcctga-cctcagacgatctgcccgcctcagcctcccaaagtgctgggattacagccataggccactgc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790463 192 + 195804263 ttctcctgcc-tcagctt-cccgagtagctggggctgcaggcatgagccaccatatccagtctttttttttttt----------------------ggatttttagtagagacagggttttgccacattag-ccaggctggtctcgaactcctga-cctcagacgatctgcccgcctcagcctcccaaagtgctgggattacagccataggccactgc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827748 206 + 4876863 ttctcctgcc-tcagctt-cccgagtagctggggctgcaggcatgagccaccatatccagctttttttttttttttt--------tttttttttttggatttttagtagagacagggttttgccacattgg-ccaggctggtctcgaactcctga-cctcagacgatttgactgcctcagcctcccaaagtgctgggattatagccataggccactgc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717558 204 + 115148730 ttcttctgcc-tcagtct-cccgagtagctgggactacaggcatgagccaccatatccagcttttttatttttttat----------ttttattttttatttttggtagagacagggttttgccacattgg-ccaggctggtcttgaactcctga-cctcagacaatctgtctgcctcaccctcccaaagtgctgggattacaggcgtaggccactgc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943324 200 + 189454096 ttctcctgcc-tcagcct-cctgagtaactgtgacta--------------catatccagcttttttttttttttttttttttttttttttttttttgatttttagtggaggcaggatttggccacgttgg-ccaggctggtcttgaactcatga-cctcagacgatctgcctgcctcagcctcccaaagtgctgggattacaggcataggctgctgc i macFas5.chr5 C 0 C 0 s calJac3.chr3 189618037 180 - 190850796 ttctcctgccttcagcctccccaagtagctagtactacaggcataagtcaccacattaggcta-----------ttt-------------tttttttaattttcattagagacggg-ttttgccatattggcccaggctggtcttgaactcctgaccctcagacgattggcccgccgcagcctctcaaagtg-------------tgtgagcctctgt i calJac3.chr3 M 252 C 0 s aotNan1.NW_018492112v1 3396020 187 - 5030052 ttctcctgcc-tcagcct-cccaagtagctagtactacaggcacaagccaccacattaggctaattttttttttttt-------------tttttttaattttcattagagacagg-ttttgccatattgg-tcaggctggtcttgaactcctga-cctcagacgatttgcccacctcagcctcccaaagtg-------------catgagcctccat i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955008 98 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=22420.000000 s hg38.chr4_KI270789v1_alt 119590 13 + 205944 acccagccGTATC s panTro5.chr4 192906987 13 + 194502333 acccagcTGTATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790655 13 + 195804263 acccagccGTATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827954 13 + 4876863 acccagccGTATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717762 13 + 115148730 acccggccGTATC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943524 12 + 189454096 atctggcTGTAT- i macFas5.chr5 C 0 C 0 s calJac3.chr3 189618217 13 - 190850796 gcctggccATATC i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3396207 13 - 5030052 gcctggccATATC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16955106 13 - 59632846 ACCCAATTTTTTA i canFam3.chr16 I 98 C 0 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11233999 131 - 11315646 I a score=228693.000000 s hg38.chr4_KI270789v1_alt 119603 74 + 205944 TTTTAATTTTAATACCCAAATGTATTATCAAGCTAATAAATTTGaataaaaac--aaaatagtaaagctaatataa s panTro5.chr4 192907000 74 + 194502333 TTTTAATTTTAATACACAAATGTATTATCAAGCTAATAAATTTGaataaaaac--aaaatagtaaagttaatataa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790668 74 + 195804263 TTTTAATTTTAATACACAAATGTATTATCAAGCTAATAAATTTGaataaaaac--aaaatagtaaagttaatataa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3827967 74 + 4876863 TTTTAATTTTAATACACAAATGTATTATCAAGCTAATAAATTTGaataaaaac--aaaatagtaaagttaatataa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717775 74 + 115148730 TTGTAATTTTAATATACAAATGTATTTTCAAGTTAATAAATTTGaataaaaac--aaaatagtaaagttaatataa i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943536 68 + 189454096 -----ATTTTAATATGCAAATGTATTTTCAAGATAATAAATTtgaataaaaac--aaaatagtaaagttaa-ataa i macFas5.chr5 C 0 C 0 s calJac3.chr3 189618230 76 - 190850796 TTTTAATTTTAATATACAAATGTATTTACAAGTTAATAAATTCGAATAAAAGCATAAAATAGTACAGTTAATATAA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3396220 76 - 5030052 TTTTAATTTTAATATACAAATGTATTTACAAGCTAATAAATTTGAATAAAAGCATAAAATAGTACAGTTAATATGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11234130 76 - 11315646 TTTTAAATTTAGTACAGTGATGTATTTTCAAGCTAATAGGTTTGAATAGAAGCACAAAATAATAATGTTCATATAA i otoGar3.GL873580 I 131 C 0 s canFam3.chr16 16955119 76 - 59632846 TTTCAATTTTATTACTCCAACATATTTTCAAGCTAATGTATTTGAATAAAAGTATAAAATAGTAAAGTTAATATAA i canFam3.chr16 C 0 I 9145 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I a score=401413.000000 s hg38.chr4_KI270789v1_alt 119677 166 + 205944 atatta---aactttttacacaaagaattggttctttaaaaaggttagcaaaattgagaaatc-tttgctagaatgatttaggaagaa----agaagactcaa----ctgaaaatcagaagtgaaagaagagacattactaccaattttgcagaaataaaa--------------------------------------------aggattgtaa-------------aagagta s panTro5.chr4 192907074 170 + 194502333 atatta---aactttttacacaaagaattggttctttaaaaaggttagcaaaattgagaaatc-tttgctagaatgattaaggaagaa----agaagactcaaaaaactgaaaatcagaagtgaaagaagagacattactaccaattttgcagaaataaaa--------------------------------------------aggattgtaa-------------aagagta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790742 170 + 195804263 atatta---aactttttacacaaagaattggttctttaaaaaggttagcaaaattgagaaatc-tttgctagaatgattaaggaagaa----agaagactcaaaaaactgaaaatcagaagtgaaagaagagacattactaccaattttgcagaaataaaa--------------------------------------------aggattgtaa-------------aagagta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3828041 168 + 4876863 atatta---aactttttacacaaagaattggttctttaaaaaggttagcaaaattgagaaatc-tttgctagaatgattaaggaagaa----agaaga--caaaaaactgaaaatcggaagtgaaagaagagacattactaccaattttgtagaaataaaa--------------------------------------------aggattgtaa-------------aagagta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112717849 168 + 115148730 atacta---aactttttacacaaagaa-tggttctttaaaaaggttaacaaaattgagaaatcttttgctagaatgattaaggaagaa----agaaga--caaaaaactgaaaatcagaagtgaaagaagagacattactacccattttgcagaaataaaa--------------------------------------------aggattataa-------------aagagta i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943604 167 + 189454096 a----a---aactttttacacaaagaattggttcttcaaaaaggttaacaaaattgagaaattttttgctagaatgattaaggaagaa----agaagactcaaaaaactgaaaatcagaagtgaaagaggagacattactatcaattttacagaaataaaa--------------------------------------------aggattataa-------------aagagga i macFas5.chr5 C 0 C 0 s calJac3.chr3 189618306 175 - 190850796 ATATTA---AACTTTTTACacaaagaattggttctttaaaaagattaacaaaatggagaaaccttttgctagaatgcttaagagagaaagagagaacacccaataaactaaaaattggaagtgaaaaaagagacattactaccaattttgcagaaataaaa--------------------------------------------aggattataa-------------aagagtc i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3396296 175 - 5030052 ATATTA---AACTTTTTACacaaagaattggttctttaaaaagattaacaaaattgagaaaccttttgctagaatgattaaggaagaaaaagagaagactcaataaactaaaaattggaagtgaaagaagagacattactacccattttgcagaaataaaa--------------------------------------------aggattataa-------------aagagtc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11234206 221 - 11315646 ATATTAATGAACTTTGgaaaccaaaatttggttctccaaaaatattaacaaaattgacaagtgtttaactagattggct-------------aagaaacccaaataact-aaaatcagaaatgaaaaagaatacatcactacaaattttatacaaacataatcccagcactttgggaagccaagacaggtggatcatctgagctcaggagttcaagaccagtctgagcaagagta i otoGar3.GL873580 C 0 I 118 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I a score=1397109.000000 s hg38.chr4_KI270789v1_alt 119843 573 + 205944 ctgtgaac-------------------------------------------------------------------------------------aattgtata------------------------------------ccaacaaactgaacatcttaggtgagatggacaaattcctagaaacacacaaatggccaagattgaatcacgaagaatcagaatatctcaagagactt-a----cagtaaggagattaactctgtaataaccccccagcaaagaaaagctaagggctagatgacttcactggataattgtagcaaacatttaaagaacaattaaaacaaatctttctcaaactcttaataaaaagcaaagtggagggagtactgccaaactcaatctacgagaccagatttaccctgataccaaaatcagacaagtatactatgagaaaagaaag----------------------tacagaccaatatccctgattaatactgatgcagaaatcctcaagaaaatactagcaatcagaactcacaag-acattaaaagaattttacatcatggcaaagtgggctttagtcctagaatgcaagaatggt-aaatatatgaaa----atcaaagtaatgccctacattcacagaatgaaggacaaaaaccatgtgatgatctcaactgatgcaga-----aagaaaaaatttgacaagatgct-c- s panTro5.chr4 192907244 574 + 194502333 ctgtgaac-------------------------------------------------------------------------------------aattgtata------------------------------------ccaacaaaccgagcatcttaggtgagatggacaaattcctagaaacacacaaatggccaggattgaatcatgaagaatcagaatatctcaacagactt-a----cagtaaggagattaactctgtaataacctcccagcaaagaaaagctaagggctagatgacatcactggataattgtagcaaacatttgaagaacaattaaaacaaatccttctcaaactcttaataaaaagcaaagtggagggagtactgccaaactcaatctacgagaccagatttaccctgataccaaaatcagacaactacactacaagaaaacaaag----------------------tacagaccaatatccctgattaatactgatgcagaaatcctcaagaaaatactagcaatcagaattcacaag-acattaaaaggattttacatcatgacaaagtgggctttagtcctggaatgcaagaatggttcaatatatgaaa----atcaaagtaatgccctacattcacagaatgaaggacaaaaaccatgtgatgatctcaactgatgcaga-----aagaaaacatttgacaagatgct-c- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192790912 574 + 195804263 ctgtgaac-------------------------------------------------------------------------------------aattgtata------------------------------------ccaacaaaccgagcatcttaggtgagatggacaaattcctagaaacacacaaatggccaggattgaatcacgaagaatcagaatatctcaacagactt-a----cagtaaggagattaactctgtaataacctcccagcaaagaaaagctaagggctagatgacatcactggataattgtagcaaacatttgaagaacaattaaaacaaatccttctcaaactcttaataaaaagcaaagtggagggagtactgccaaactcaatctacgagaccagatttaccctgataccaaaatcagacaactacactacaagaaaacaaag----------------------tacagaccaatatccctgattaatactgatgcagaaatcctcaagaaaatactagcaatcagaattcacaag-acattaaaaggattttacatcatgacaaagtgggctttagtcctggaatgcaagaatggttcaatatatgaaa----atcaaagtaatgccctacattcacagaatgaaggacaaaaaccatgtgatgatctcaactgatgcaga-----aagaaaacatttgacaagatgct-c- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3828209 574 + 4876863 ctgtgaac-------------------------------------------------------------------------------------aattgtata------------------------------------ccaacaaactgaacgtcttaggtgagatggacaaattcctagaaacacacaaatggccaagattgaatcacgaagaatcagaatatctcaacagactt-a----cagtatggagattaactctgtaataaccccccagcaaagaaaagctaagggctagatgacttcactggataattgtagcaaacatttaaagaacaattaaaacaaatccttctcgaactggtaataaaaagcaaagtggagggagtactgccaaactcaatctacgagaccagatttaccctgataccaaaatcagacaactacactacaagaaaagaaag----------------------tacagaccaatatccctgattaatactgatgcagaaatcctcaagaaaatactagcaatcagaattcacaag-acattaaaaggattttacatcatgacaaagtgggctttagtcctggaatgcaagaatggttcaatatatgaaa----atcaaagtaatgccctacattcacagaatgaaggacaaaaaccatgtgatgatcttaactgatgcaga-----aagaaaaaatttgacaagatgct-c- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112718017 573 + 115148730 ctatgagc-------------------------------------------------------------------------------------aattgtata------------------------------------ccaacaaactgaacatcttaggtgagatggacaaattcctagaaacacacaaatggccaagattgaatcatgaagaaac--aatatctgaacagactt-a----cagtaaggagattaactctgtaataacctcccagcaaagaaaagctaagggctagatggcttcactggataattctagcaaacatttaaagaacaattaaaacaaatccttctcaaactcttaataaaaagtaaagtggagggagtactgccaaactcaatctacaagaccagatttaccctgataccaaaatcagacaaatacactacaagaaaagaaag----------------------tacagatcaatatccctgatgaatactgatgcagaaatcctcagtaaagtactagcaatctgaattcacaag-acattaaaaggatcttacatcatgacaaagtgggctttagttctggaatgcaagaatggttcaatatatgaaa----atcaaagtaatgtcttacattcacagaatgaaggacaaaaaccatgtgattatctcaactgatgcaga-----aagaaaaaatttgacaggatgctat- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187943771 565 + 189454096 ctatgaat-------------------------------------------------------------------------------------aattttata------------------------------------caaacaa------catcttcggtgagatggacaaattcctagaa----acaaatggccaagattgaatcacgaagaaacagaatatctaaacagacttaa----cagtaaggagattaactctgtaataacctcccagcaaagaaaagctaagggttagatggcttcactggataattctagcaaacatttaaagaacaattaaaacaaatccttctcaaactcttaataaaaagcaaagtggagggagtactgccaaactcaatctatgagaccagatttaccctgataccaaaatcagacaaatacactacaagaaaagaaag----------------------tacagaccaatatccctgattaatactgatacagaaatcctcaataaaatactagtaatctgaattcacaag-acattaaaaagattttacattattacaaagtgggctttagtcctggaatgcaagaatggttcaatatatgaaa----atcaaagtaacaccctactttcacagaatgaagaacaaaaaccacgtgataatctcaactgatgcaga-----aa-aaaaaatttgacaagatgctct- i macFas5.chr5 C 0 C 0 s calJac3.chr3 189618481 575 - 190850796 ctatgaac-------------------------------------------------------------------------------------gattgtatg------------------------------------ccaacatgttgaacatcttaggtgagacagacaaattcctagaaacactcaaatggccaagactgaatcatgaagaaatagaatatctgaacagactt-a----tagtaaggagattaactctataacaacctctcagcaaagaaaagctaagggctatatggcttcactgggtaattctagcaaacatttgaagaagaattaaaacaaatccttctcaaactc-taataaaagtcagagtggagggagtattgccaaactcagtctatgagaccagatataccctgatagccaaatcacacaaacacaccgtaagaaaagaaag----------------------tacagagcattatccctgattaatactgttgcagaaatcctcagtaaaataccagcaatctgaattcacagg-acattaaaaggattttacatcatgacaaagtgggc-ttagtccgggaatgcaagaatgattgaatatatgcaaacagatcccagtaatgccctacattcacagagtggaggacaaaaatcctgtgattatcccaactgatgcaga-----aa-aaaacgtttgacaagatGCT-C- i calJac3.chr3 C 0 I 1597 s aotNan1.NW_018492112v1 3396471 574 - 5030052 ctatgaac-------------------------------------------------------------------------------------aactgtatg------------------------------------ccaactcgttgaacatcttaggtgagatagacaaattcctagaaacacacaaatggccaagactgaatcatgaagaaatagaatatctgaacagatgt-a----tagtaaggagattaactctataataacctctcagcaaaggaaagttaagggctatatggcttcaccggataattctagcaaacctttgaagaagaattaaaacaaatccttctcaaactc-taataaaagtcaaagtggagggagtattgccaaactcaatctatgagaccagatataccctgataccaaaatcagacaaatacactacaggaaaagaaag----------------------tacagagcaatatccctgattaatactgacgcagaaatcctcagtaaaataccagcaatctgaattcacagg-acatgaaaaagattttacatcatgacaaagtaggc-ttagtcctggaatgcaagaatagttcaatatatgcaaatagatccaagtaatgccctacattcacagagtgaaggacagaaatcatgtgattatctcaactgatgcaga-----aa-aaaa-gtttgacaagatgct-c- i aotNan1.NW_018492112v1 C 0 I 1 s otoGar3.GL873580 11234545 709 - 11315646 ctgtgaactgtgactccacagcactgtacccagagtgacaaagtgagactctgtctcaaaacagacaaagaaaacaaacaaaaaaaCCAACCAAATTTTatagaaataaaacaagattgtaaaagagtactgtgagagccaacaaactggaaaacttagataagataga-aaattcgtaggaagacacaa----ctaagatggaatcatgaa-aaacagaaaatctgaacagaaat-aaaactagtaaagagattgaatctttaagaacttcctgat-tagaaaagttggggagcacatggtttcactagct---------aaatatttaaagaagaatgaaaataaatactggttaaattcttaccaaaaatcgaagaaaagggaacacttccaaattcattctatgagaccagtattatcaggatattaaacctgggcaaacatactgcaagaaaaaaagaaaaaaaagaaaaaaaaaaaaccttcagactaatattcttatcaaatattgatgcaaaagtcctcaacaaaatactagcaatctgatttcaaaagcacattaaaaggattatacatcataaccaaagggactttgttcctggaattcaaggatgactcaacatataaaaagcaatcactataatgtaccacactggcggaac---agataaaacacacacaattatttcaatggatgcaaagtattaa-caaagatt---caacatact-tt i otoGar3.GL873580 I 118 C 0 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I a score=18599.000000 s hg38.chr4_KI270789v1_alt 120416 10 + 205944 tattacaaaa- s panTro5.chr4 192907818 10 + 194502333 tattacaaaa- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192791486 10 + 195804263 tattacaaaa- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3828783 10 + 4876863 tattacaaaa- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112718590 10 + 115148730 tattacaaaa- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187944336 10 + 189454096 tactgcaaaa- i macFas5.chr5 C 0 C 0 s aotNan1.NW_018492112v1 3397046 10 - 5030052 tattacaaaa- i aotNan1.NW_018492112v1 I 1 I 3531 s otoGar3.GL873580 11235254 11 - 11315646 tattataaatg i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I a score=1072465.000000 s hg38.chr4_KI270789v1_alt 120426 692 + 205944 cactcaac-aactagtaatagaaggaaacttcgtcaacacagtaaaggccaaatataaaca-cccagaactaacatcgtactcaatggttaaagactgaatggtctccctctaagatcaagaggagcaagacaagg----atgctctctttcaccgtttctgttctacttagtgttag------aagtcctacctggagtaattaggtaagaaaaagcaataaaagtcatccacatgagaaaggaagaagtaaatttatatctgttcacagatcacataatcttatgtgtagaaaaccataactattacat---------------------aaaaatgaattcagcaaagttgcagaattcaaaatcaacacacaaaaatcaattgcatttctgtgtattaatgatgagcaacccaaaggaaattaagaa-aacaattcaatttacaatagcattaaaaagaataaaacacttaagaacaaacttaaccactgaggcaaaagacttgtactctgaaaactataaaagaaat--------atatacataagtggaaagacatcgatattcatgaattagaagactt-atattgttaagatagtagtgttccccaaaatgatctacagattcaatgcaatccctatcaaaatctc-gaccttttttgcagacat-ggaaaaattcattgttaaattcaaatggaaattaaaggaatctatgatagccaaaataatctt s panTro5.chr4 192907828 692 + 194502333 cactcaac-aactagtaatggaaggaaactttgtcaacacagtaaaggccaaatataaaca-cccagaactaacatcgtactcaatggttaaagactgaacggtctccctctaagatcaagaggagcaagacaagg----atgccctctttcactgtttctgttctacttggtattag------aagtcctacctggcataattaggtaagaaaaagcaataaaaggcatccacatgagaaaggaagaagtaaatttatctctgttcacagatcacataatcttatgtatagaaaaccataactattacat---------------------aaaaatgaattcagcaaagttgcagaattcaaaatcaacacacaaaaatcaattgcatttctatgtattaatgatgagcaacccaaaggaaattaagaa-aacaattcaatttacaatagcattaaaaagaataaaacacttaagaacaaacttaaccactgaggcaaaagacttgtacactgaaaactatgaaagaaat--------atatacataagtggaaagacatcgatattcatggattagaagactt-atattgttaagatattagtgttccccaaaatgatctacagattcaattcaatccctatcaaaatctc-gaccttttttgcagacat-ggaaaaattcattgttaaattcaaatagaaattaaaggaatctatgatagccaaaataacctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192791496 692 + 195804263 cactcaac-aactagtaatggaaggaaactttgtcaacacagtaaaggccaaatataaaca-cccagaactaacatcgtactcaatggttaaagactgaacggtctccctctaagatcaagaggagcaagacaagg----atgccctctttcactgtttctgttctacttggtattag------aagtcctacctggcgtaattaggtaagaaaaagcaataaaaggcatccacatgagaaaggaagaagtaaatttatctctgttcacagatcacataatcttatgtatagaaaaccataactattacat---------------------aaaaatgaattcagcaaagttgcagaattcaaaatcaacacacaaaaatcaattgcatttctatgtattaatgatgagcaacccaaaggaaattaagaa-aacaattcaatttacaatagcattaaaaagaataaaacacttaagaacaaacttaaccactgaggcaaaagacttgtacactgaaaactatgaaagaaat--------atatacataagtggaaagacatcgatattcatggattagaagactt-atattgttaagatattagtgttccccaaaatgatctacagattcaattcaatccctatcaaaatctc-gaccttttttgcagacat-ggaaaaattcattgttaaattcaaatagaaattaaaggaatctatgatagccaaaataacctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3828793 692 + 4876863 cactcaac-aactagtaatagaaggaaactttgtcaacacagtaaaggccaaatataaaca-cccagaactaacatcgtactcaatggttaaagactgaacggtctccctctaagatcaagaggagcaagacaagg----atgccctctttcaccgtttctgttctacttagtattag------aagtcctacctggagtaattaggtaagaaaaagcaataaaagtcatccacatgagaaaggaagaagtaaatttatctgtgttcacagatcacatagtcttatgtgtagaaaaccaaaactattacat---------------------aaaaatgaattcagcaaagttgcagaattcaaaatcaacacacaaaaatcaattgcatttctatgtattaatgatgagcaacccaaaggaaattaagaa-aacaattcaatttacaatagcattaaaaagaataaaacacttaagaacaaacttaaccactgaggcaaaagacttgtacactgaaaactataaaagaaat--------atatacataagtggaaagacatcgatattcatgaattagaagcctt-atattgttaagatattagtgttccccaaaatgatctacagattcaatgcaatccctgtcaaaatctc-gaccttttttgcagacat-ggaaaaattcattgttaaattcaaatggaaattaaaggaatctatgatggccaaaataatctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112718600 696 + 115148730 cactcaacaaactagtaatagaaggaaactttgtcaatatagtaaaggccaaatataaacaccccacaactaacatcgtactcaatgattaaagactgaatggtctccctctaagatcaagcagagcaagacaaggaagaatgccctctttcaccatttctgttctacttagtattag------aagtcctacctgaagtaattaggtaagaaaaagaaataaaagtcatccacatgagaaaggaagaagtaaatttatctctggtca-agatcacgtaatcttatgtgtagaaaaccataactattacat---------------------aaaaatgaattcagcaaagttgcagaattcaaaatcaacaca-aaaaatcaattgcatttctatgtattaatgatgagcaacccaaaggaaattaagaa-aacaattcaatttacaatagcattaaaaagaataaaatacttaagaacaaacgtaaccactgaggcaaaagacttgtacactgaaaactataaaagaaat--------atatatgtaagtggaaagacatcaatattcatgaattagaagactt-atattgttaagatattagtgttccccaaaatgatctacagattcaatgcaatctatatcaaaatctc-aaccttttttgcagacat-ggaaaaattcaatgttaaatttaaatcgaaattaaaggaatctataatagccaaaataatctt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187944346 699 + 189454096 cactcaacgaactagtaatggaaggaaactttgtcaacatagtaaaggccaaatataaacactccacaactaacatcctactcaatggttaaagactgaatggtctccctctaagattaagaggagcaagacaagg----atgccctctttcaccatttctattctaattagtattaggactacaagtcctacctggagtaattaggtaagaaaaagaaataaaagtcatccacatgagaaaggaagaagtaaatttatctctgttcacagatcacataatcttatgtgtagaaaaccataactgttacat---------------------aaaaatgaattcagcaaagttgcagaatccaaaatcaacacacaaaaatcaattgcatttatatatattaatgatgagtaactcaaaggaaattaag---aacaattcaatttacaatagcattaaaaagaataaaatacttaagaacaaacttaaccactgaggcaaaagacttgtacactgaaaactataaaagaaag--------atatacataagtggaaagacatcaatattcatgacttagaacagtt-atgttgttaagatgttagtcttccccaaaatgatctacagattcaatgcaatccctatcaaaatctcaaacctgttttgcagacat-ggaaaaattcattgttaaattcaaatggaaattaaaggaatctataatagccaaaatcatctt i macFas5.chr5 C 0 C 0 s otoGar3.GL873580 11235265 706 - 11315646 aactcaacaaactacaaaaagaagaaaacttcattagcataataaaggccatgtatgaaaagcgtacaactaacatcattctcagtggtgaaagactgacagctctcctgctaagatcaagaggagcaaggcaagg----gcactatctttcatcagttctgttctgcct-gtgctgg------gaaatgtagccagagcaagtaggtaagaaaaacaaataaggg-catccaaattggaaaggaagaagtaaaattatctctgatcatagatca-atgaatttatatgtagaaaaccgtaagtgcttcatccaaaaaaactattagaaagaataaataaattcagcaaagctatagaatacaaaatcagtacacaaaaatcaattgaatttctatatattaataatgagcaatacaaaagaaaattagaacattaatttcatttatgatagcatcaaaagaaataaaatactcagcaacaa----------------tggagactagtatgctggaaactacaaaagaaattaaagaagacattaataaatggaaagacatcagtgttcagggaatggaagactgaatattgttaagatgttggtagtacccatagtaatctatagagtcaatgcaatctccatc-aaatccc-aacactttttacagaaatagaaaaaattcatcctaatattcatgtggaaacagaagcgatccaaaatagtcaaaatattctt i otoGar3.GL873580 C 0 I 1991 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I a score=1672330.000000 s hg38.chr4_KI270789v1_alt 121118 1355 + 205944 gaaatagaaaaacaagg-ttagaggtctcgt-acttcatgatttaaaaactcactgcaaagctacagtaatcaaaacagtggttattgtcataaagacaagagtatagaccaacaaaatggaatagagagcctagaaataaaccttcacatacatggtcaaatgatttcaacaagggtgccaagaatattcaatagggaaagggcagtcttttcaaccagtggtcctgagaaaacaagataaccacatgcaaaagagttaagttgaaccattaccatagactatatacaaaaagttaactaaaaatggatcaaagacctaacccataagagttaaaactataaaactcttaaacaaaaatataaggggaaagcttcatgtcactggatttggcattga-ttatttggatatgacaataaaagcatagataacgaagaaaaataagtaaattggactacaccaaagttaaaaacttctgtgcaaaacaggctataatcaacagagtgaaaaggcaacccataaaatgggaaacatttgcaaataatataactgattagagttatt---cagaatatataaagaactcttacaa--------------------------ctcacacacacacacacacacacacgaaacccaattaaaccattgacaaaagccttgaatagacatctctacaaaaaagatacacacatagctaataagcacatgaagagatgcttgataccactaattgttagagaaatggaagtcaaaaccctgactggcaaaacactgtgacaccacttgatacccattaggattgctactattaaaaaaaaatcagaaaataacaagcattggcaaggatgtggataaactggaaaacttttgcatttttggtgggagataaaatggtgcagccactatggaaaacagtatggtggttactcaaaaaattaaaaatagaattaccatatggtgcagtgatttcacttctgggtatatatcaaaaataattaaaatgaagcacttgtacagatatttttgcacttatgttcataagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcattgctggcggaataaacaaactatgacatttacttacaataaaatatttttcagccttaaaatggaaggaaattctgacacatgctacaactgtaggtcattatgttgagtgaaataagccagtcataaaaggataaatactgtatgattcTGAAACAGACCGAATAGTCCC--ATTTTTTAAAAAAAATtttgatgaacatagaaattgacccctttggtattaaagtttgaaacttatatttg-ttttttctgagttccttcttcaggaaatgaccttcaggcc s panTro5.chr4 192908520 1368 + 194502333 gaaatagaaaaacaagg-ttagaggtctcgt-acttcatgatttaaaaactcactgcaaagctacagtaatcaaaacagtggttattgtcataaagacaagagtatagaccaacaaaatggaatagagagcctagaaataaaccttcacatacatggtcaaatgatttcaacaagggtgccaagaacattcaatagggaaagtgcagtcttttcaaccagtcgtcctgagaaaacaagataaccacatgcgaaagagttaagttgaaccattaccatagactatatacaaaaagtta-ctaaaaatggatcaaagacctaacccataagagttaaaactataaaagtcttaaacaaaaatataaggggaaagcttcatgacactggatttggcattga-ttatttggatatgacaataaaagcacagataatgaagaaaaataagtaaattggactacaccaaagttaaaaacttctgtgcaaaacaggctataatcaacagagtgaaaaggcaacccataaaatgggaaacatttgcaaataatatagctgattagagttattattcagaatatataaagaactcttacaag--------------acacacacacacacacacacacacacacacacacacgaaacccaattaaaccattgacaaaaaccttgaatagacatctctacaaaaaagataaacacatagctaataagcacatgaagagatgcttgatatcactaattgttagagaaatggaagtcaaaacctggactggcaaaacactgagacaccacttgatacccattaggattgctactattaaaaaaaa-tcagaaaataacaagcattggcaaggatgtggataaactggaaaacttttgcatttttggtgggagataaaatggtacagccactatggaaaacagtatggtggttactcaaaaaattaaaaatagaattaccatatgatgcagtgatttcgcttctgggtatatatcaaaaataattaaaatgaagcacttgtacagatatttttgcacttatgttcataagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcattgctggtggaataaacaaaatatgacatttacttacaataaaatatttttcagccttaaaatggaaggaaattctgacacatgctaccactgtaggtcattatgttgagtgaaataagtcagtcataaaaggataaatactgcatgattcTGAAACAGACTGAAGAGTCCC--ATTTTTTAAAAAAttttttgatgaacatagaaattgacccctttggtattaaagtttgaaatatatatttg-ttttttctgagttccttcttcaggaaatgaccttcaggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192792188 1382 + 195804263 gaaatagaaaaacaagg-ttagaggtctcgt-acttcatgatttaaaaactcactgcaaagctacagtaatcaaaacagtggttattgtcataaagacaagagtatagaccaacaaaatggaatagagagcctagaaataaaccttcacatacatggtcaaatgatttcaacaagggtgccaagaacattcaatagggaaagtgcagtcttttcaaccagtcgtcctgagaaaacaagataaccacatgcgaaagagttaagttgaaccattaccatagactatatacaaaaagtta-ctaaaaatggatcaaagacctaacccataagagttaaaactataaaagtcttaaacaaaaatataaggggaaagcttcatgacactggatttggcattga-ttatttggatatgacaataaaagcacagataatgaagaaaaataagtaaattggactacaccaaagttaaaaacttctgtgcaaaacaggctataatcaacagagtgaaaaggcaacccataaaatgggaaacatttgcaaataatatagctgattagagttattattcagaatatataaagaactcttacaagacacacacacacacacacacacacacacacacacacacacacacacacacgaaacccaattaaaccattgacaaaaaccttgaatagacatctctacaaaaaagataaacacatagctaataagcacatgaagagatgcttgatatcactaattgttagagaaatggaagtcaaaacccggactggcaaaacactgagacaccacttgatacccattaggattgctactattaaaaaaaa-tcagaaaataacaagcattggcaaggatgtggataaactggaaaacttttgcatttttggtgggagataaaatggtacagccactatggaaaacagtatggtggttactcaaaaaattaaaaatagaattaccatatgatgcagtgatttcgcttctgggtatatatcaaaaataattaaaatgaagcacttgtacagatatttttgcacttatgttcataagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcattgctggtggaataaacaaaatatgacatttacttacaataaaatatttttcagccttaaaatggaaggaaattctgacgcatgctaccactgtaggtcattatgttgagtgaaataagtcagtcataaaaggataaatactgcatgattcTGAAACAGACTGAAGAGTCCC--ATTTTTAAAAAAAttttttgatgaacatagaaattgacccctttggtattaaagtttgaaatatatatttg-ttttttctgagttccttcttcaggaaatgaccttcaggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3829485 1348 + 4876863 gaaatagaaaaacgagg-ttagaggtctcgt-acttcatgatttaaaaactcactgcaaagctacagtaatcaaaacagtggttattgtcataaagacaagagtatagaccaacaaaatggaatagagagcctagaaataaaccttcacatacatggtcaaatgatttcaacaagggtgccaagaacattcaatagggaaagggcagtcttttcaaccagtggtcctgagaaaacaagataactacatgcaaaagagttaagttgaactattaccatagactatatacaaaaagttaactaaaaatggatcaaagacctaacccataaaagttaaaactatgaaagtctt----aaaaatataaggggaaagcttcatgacactggatttggcattga-ttatttggatatgacaataaaagcatagataatgaagaaaaataagtaaattggactacaccaaagttaaaaacttctgtgcaaaacgggctataatcaacagagtgaaaaggcaagccataaaatgggaaacatttgcaaataatataactgattagagttatt---cagaatatataaagaactcttacaa----------------------------ctctcacacacacacacacacacgaaacccaattaaaccattgacaaaagccttgaatagacatctctacaaaaaagatacacacatagctaataagcacatgaagagatgcttgataccattaattgttagagaaatggaagtcaaaaccctgactggcaaaacactgagacaccacttgatacccattaggattgctactattaaaaaaaa-tcagaaaataacaagcattggcaaggatgtggataaattggaaaacttttgcatttttggtgggagataaaatggtgcagccactatggaaaacagtatggtggttactcaaaaaattaaaaatagaattaccatatgatgcagtgttttcacttctgggtatatataaaaaataattaaaatgaagcacttgtacagatatttttgcacttatgttcttaagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcattgctggcggaataaacaaaatatgacatttacttacaataaaatatttttcagccttaaaatggaaggaaattctgacacatgctacaactgtaggtcattatgttgagtgaaataagccagtcataaaaggataaatactgtatgattctgaaacagaccgaatagtccc--atttttaaacaaattttttgatgaacatagaaattgacgcctttggtattaaagtttgaaacttatatttg-ttttttctgagttcctttttcaggaaatgaccttcagtcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112719296 1352 + 115148730 gaaatagaaaaacaaag-ttaaaggtctcatggcttaatgatttaaaaactcactgcaaagccacagtaatcaaaacagtggttattgtcataaagacaggaatatagaccaatgaaatggaatagagagcctagacataaaccttcacatacatggccaaatgatttcaacaagggtgtcaagaacattcaatagggaaagggcagtcttttcaaccaatggtcctgagaaaatgagataaccacatgcaaaagagttaggttggaccattaccatagaccatatacaaaaaattaactaaaaatggatcaaagacctaacccataagagataaaactttaaaactcttaaacaaaagtgtaaggggaaagcttcatgacactggatttggcaatga-ttatttggatatgacaataaaagcatagataac-aagaaaaataagtaaattggac-acaccaaacttaaaaatttctgtgcagaacaggctataatcaacagagtgaaaaggcaacccataaaatgggaaacatttgcaaataatataactgattagagttattattcagaatatataaagaactcttacaa----------------------------ctcacacacacacacacacacacaaaacccaattaaaccattgacaaaagccttgaatagacatctctacaacaaagatacacacatagctaataagcacatgaagagatgctcaatatcactaattgttagagaaatgg-agtcaaaaccctgacttgcaaaacactgagatacaactttatacccattaggattgctactattaaaaaaaaatcagaaaataacaagcattggcaatgatgtggataaactggaaaactcttgcatttttggtgggagataaaatggtgcagccactatggaaaacagtatagtggttactcaaaaaattaaaaatagaattaccatatgatgcagtgatttcacttctgggtatatatcaaaaataattaaaatgaagcacttgtacagatatttttgcacctatgttcataagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcattgctggcagaataaacaaaatatgaaatttacttacaataaaatgtttttcagccttaaaatggaaggaaattctgacacatgctacaactgtaggttattatgttaagtgaaataagccagtcataaaaggataaatactgtatgattcTGAAACAGAGCCAATAGTCCC--ATTTTTAAAAAAAttttttgatgaacatagaaatggacccctatggtattaaagtttgaaacttatatttgtttttttctgagttcc---ttcaggaaatgaccttcaggcc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187945045 1343 + 189454096 gaaatagaaaaacaaagtttagaggtctcat-acttcttgatttaaaaactcactgcaaagctacagtaatcaaaacagtggttattctcataaagacaggaatatagaccaatgaaatggaatagagagcctagaaataaactttgacatacatggtcaaatgatttcaacaagggtgccaagaacattcaatagggaaagggcagtcttttcaaccactggtcctgagtaaataaggtaatcacatgcaaa--agttaagttggaccattaccatagaccatatacaaaaaattaactaaaaatggatcaaagacctaacccataagagataacactataaaactcttaaacaaaaatataaggggaaagcttcgtgacactggatttggcaatgattttttttggtatgacaataaaagcataattaacagagaa----aagtaaattggactacaccaaagttaaaaacttctgtgcagaacaggctataatcagcggagtgaaaaggcaacccacaaaatgggaaacatttgcaaataatataactgattagagttaatattaagaatatataaagaactcttaaaa----------------------------cataca-----acacaca-acacacaacccaattaaacgatcgacaaaagccttgaatagacatttttacaaagaagatacacacatagctaattagcacatggagagatgcttgatatcactatttgttagagaaatgcgagtcaaaactgtgacttgcaaaacactaagataccactttatacccattagaatttctactattaaaaaaaa-tcagaaaat---aagcattggcaaggatgtgcataaactgg-aaacctttgcatttttggtgggagataaaatggtgcagccactatggaaaacagtacggtggttactcaaaaaattaaaaatagaattaccatatgattcagtgatttcactcctgggtatatatcaaaaataattaaaaagaagcattcatgcagatatttttgcacctatgttcataagcagcattactaacaatagtcaaaaggtggaagtaagccaagtgttcgttgctggaggaataaacaaaatatgacatttacttgcaataaaatatttttcagccttaaaatggaaggaaattctgatgcatgctaccagtgtaggtcattatggtaagtgaaataagccagtcataaaaggataaataccgtatgattctgaaacagacccagtagtcccatatatttttttaaatttttcgatgaacatagaaatttgttttcaaacaaataaagtttgaaacttgtatttg-ttttttctgagttccttcttcaagaaatgaccttcaggcc i macFas5.chr5 C 0 I 332 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11235971 1991 - 11315646 I a score=19190.000000 s hg38.chr4_KI270789v1_alt 122473 17 + 205944 tctcaaaaaaaagtatt s panTro5.chr4 192909888 17 + 194502333 tctcaaaaaaaagtatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192793570 17 + 195804263 tctcaaaaaaaagtatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3830833 17 + 4876863 tctcaaaaaaaagtatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112720648 17 + 115148730 tctcaaaaaaaagtatt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187946720 13 + 189454096 tctcaaaaaaaag---- i macFas5.chr5 I 332 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e manLeu1.NW_012102221v1 2775487 4327 - 2847728 I e chlSab2.chr7 134321889 3923 + 135778131 I e cerAty1.NW_012001672v1 3364210 3944 + 4669795 I e macNem1.NW_012013133v1 24334503 3927 - 25927173 I e rheMac8.chr5 188999985 3969 + 190429646 I e otoGar3.GL873580 11235971 1991 - 11315646 I a score=1510710.000000 s hg38.chr4_KI270789v1_alt 122490 320 + 205944 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatggcttccttgcccctcactagttcctgtttc--------------cttacacattgttacattccttccctgctatataaactcctagttgtagttggtcagagagatggatttgagactgagttcctgtctcctcggctgcagcacccgattaaagccttcttccttggcaatactcattgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttcactaaTCatcccacttacacagt s panTro5.chr4 192909905 320 + 194502333 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcgcttccttgcccctcactaattcctgtttc--------------cttacacattgctacattccttctctgctatataaactcctagttgtagttggtcagagagatggatttgagactgagttcctgtttcctcggctgcagcacccgattaaagccttcttccttggcaatactcattgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttcactaaTCatcccacttacacagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192793587 320 + 195804263 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcgcttccttgcccctcactaattcctgtttc--------------cttacacattgctacattccttctctgctatataaactcctagttgtagttggtcagagagatggatttgagactgagttcctgtttcctcggctgcagcacccgattaaagccttcttccttggcaatactcattgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttcactaaTCatcccacttacacagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3830850 317 + 4876863 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcgcttccttgcccctcactagttcctgtttc--------------cttacacattgttacattccttccctgctatataaa---ctagttgtagttggttagagagatggatttgagactgagttcctgtctcctcggctgcagcacccgattaaagccttcttccttggcaatactcattgtctcagttcttggctttctgtgcagccagtagaagatcctagactgaactcctggtgttttactaaTCatcccacttacgcagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112720665 320 + 115148730 aaagaactgaaactcacccaattaccacatccagacaatgagataccagacccctcattcatcatgatggcttccttgcccctcactagttcctgtttc--------------cttacacattgttacattccttccctgctacgtaaactcctagttttagttggtcagagagatggatttgagaccgagttcccatctcctcagctgcagcacctgattaaagccttcttccttggtgatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaaatcctggtgtttcactaaTCATCAGacttacacagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189003954 332 + 190429646 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcctagtttcagttggtcagagag--ggatttgagactgagctcccatctccttggccgcagcaccctattaaagccttcgtccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttggctaattatcccgcttacacagt i rheMac8.chr5 I 3969 C 0 s macFas5.chr5 187946733 328 + 189454096 ----aactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcctagtttcagttggtcagagag--ggatttgagactgagctcccatctccttggccgcagcaccctattaaagccttcgtccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttggctaattatcccgcttacacagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24338430 332 - 25927173 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcctagtttcagttggtcagagag--ggatttgagactgagctcccatctccttggccgcagcaccctattaaagccttcgtccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttggctaaTTatcccgcttacacagt i macNem1.NW_012013133v1 I 3927 C 0 s cerAty1.NW_012001672v1 3368154 332 + 4669795 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcataatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcctagtttcagttggtcagagag--ggatttgagactgagctcctatctccttggccgcagcacccgattaaagccttcatccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaactcctggtgtttggctaattatcccgcttacacagt i cerAty1.NW_012001672v1 I 3944 C 0 s chlSab2.chr7 134325812 329 + 135778131 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcatgatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcccagtttcagttggtcagagag--ggatttgagactgagttcccatctccttggccgcagcacccgattaaagccttcgtccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagactgaa---ctggtgtttggctaatcatcccgcttacacagt i chlSab2.chr7 I 3923 C 0 s manLeu1.NW_012102221v1 2779814 332 - 2847728 aaagaactgaaactcacccagttaccacatccagacaatgagatgccagacccctcattcatcctgatcacttccttgcccctcactagttcctgtttccttacacattgttgcttacacattgttacattccttccctgctatataaactcctagtttcagttggtcagagag--ggatttgaggctgagctcccatcgccttggccgcagcacccgattaaagccttcgtccttagcaatactcatcgtctcagttcttggctttctgtgcagccagtagaagaacctagaccgaactcctggtgtttggctaattatcccgcttgcacagt i manLeu1.NW_012102221v1 I 4327 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e colAng1.NW_012116221v1 890322 4218 + 2368649 I e otoGar3.GL873580 11235971 1991 - 11315646 I a score=1105189.000000 s hg38.chr4_KI270789v1_alt 122810 204 + 205944 gtactt-agagtagtcacattcatagagacagaaaatagaatgggggttgtcagcagctggtggaaaggcaatggtgagttctt--gtttaatggttagagtttcagttttacaagattgaaagggttctggatatggatattgatgacggttgcacaacaatgtaatgatgttcactgaagtg-tacttttagaaatg-ttaggatga s panTro5.chr4 192910225 205 + 194502333 gtactt-agagtagtcacattcacagagacagaaaatagaatgggggttgtcagcagctggtggagaggcaatggtgagttctt--gtttaatggttagagtttcagttttacaagattgaaagggttctggatatggatattgatgacagttgcacaacaatgtaatgatgttcactgaagtg-tacttttagaaatggttagggtga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192793907 205 + 195804263 gtactt-agagtagtcacattcacagagacagaaaatagaatgggggttgtcagcagctggtggagaggcaatggtgagttctt--gtttaatggttagagtttcagttttacaagattgaaagggttctggatatggatattgatgacagttgcacaacaatgtaatgatgttcactgaagtg-tacttttagaaatggttaggatga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831167 206 + 4876863 gtgcttaagagtagtcacattcatagagacagaaaatagaatggaggttgtcagcagctggtggagaggcaatggtgagttctt--gtttaatggttagagtttcagttttacaagattgaaagggttctggatatggatattgatgacggttgcatgacaatgtaatgatgttcactgaagtg-tacttttagaaatggttaggatga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112720985 205 + 115148730 gtactt-agagtagtcacattcatagagacagaaaatagaatgagggttgtcagcagctggtggagaggcaatggtgagtcctt--gtttgatggttagagtttcagttttccaagattgaaagggttctggagatggatattgatgatgattgcacaacaatgtaatgtggttcactgaactg-tacttttaggaatggttaggatgA i nomLeu3.chr7b C 0 M 236 s rheMac8.chr5 189004286 203 + 190429646 gtactt-agagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaagcaatggtgggttcttaagtttaatggttagagtttcagttttacaaaattgaaagggttctggagatggatattgatgatggttgcacaacaatgtaa---tgttcactgaactg-tacttttaaaaatggttaggatga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947061 203 + 189454096 gtactt-agagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaagcaatggtgggttcttaagtttaatggttagagtttcagttttacaaaattgaaagggttctggagatggatattgatgatggttgcacaacaatgtaa---tgttcactgaactg-tacttttaaaaatggttaggatga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24338762 203 - 25927173 gtactt-agagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaagcaatggtgggttcttaaatttaatggttagagtttcagttttacaaaattgaaagggttctggagatggatattgatgatggttgcacaacaatgtaa---tgttcactgaactg-tacttttaaaaatggttaggatga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3368486 204 + 4669795 gtacttaagagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaagcaatggtgggttcttaagtttaatggttagagtttcagttttacaagattgaaagggttctggagatggatattgatgatggttgcacaacaatgtaa---tgttcactgaactg-tacttttaaaaatggttaggatga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326141 204 + 135778131 gtacttaagagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaggcaatggtgggttcttaagtttaatggttagagtttcagttttacaagattgaaagggttctggagatggatattaatgatggttgcacaaccatgtaa---tgttcactgaagtg-tacttttaaaaatggttaggatga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780146 203 - 2847728 gtactt-agagtagtcacattcatagagacagaaaatagaat-ggggttgtcagcagctggtggagaagcagtggcgggttcttaagtttaatggttagagtttcagttttacaagattgaaagggttctggagatggatattgatgatggttgcacaacaatgtaa---tgttcactgaactg-tacttttaaaaatggttaggatga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 894540 203 + 2368649 gtactt-agagtagtcacattcatagagacagaaaatagaatgggggttgtcagcagctggtggagaggcaatggtaggttct--agtttaatggttagagtttcagttttacaagattgaaagggttctggagatggatat---tgatggttgcacaacaatgtaatgttgttcactgaactgttacttttaaaaatggttaggatga i colAng1.NW_012116221v1 I 4218 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e otoGar3.GL873580 11235971 1991 - 11315646 I a score=10010.000000 s hg38.chr4_KI270789v1_alt 123014 2 + 205944 ta s panTro5.chr4 192910430 2 + 194502333 ta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794112 2 + 195804263 ta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831373 2 + 4876863 ta i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189004489 2 + 190429646 ta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947264 2 + 189454096 ta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24338965 2 - 25927173 ta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3368690 2 + 4669795 ta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326345 2 + 135778131 ta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780349 2 - 2847728 ta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 894743 2 + 2368649 ta i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e nomLeu3.chr7b 112721190 236 + 115148730 M e otoGar3.GL873580 11235971 1991 - 11315646 I a score=1396488.000000 s hg38.chr4_KI270789v1_alt 123016 331 + 205944 atttatatAACt--------tttt-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtggtgccatcttggctcactgcaacccccacctcctggg-tcaagagattctcctgcctcagcttcccaagtagctaggattacaggctaccacctgtgtgattacgggccaccatgcctggctaatttttgtatttttagttcgagatggggtttcaccatgttggccaggctgatcttgaactcctgacatca--tgatccacccgccttggcct--c-caaagtgctgggattacaggcatgaggcactgcgcctggcTTATAACAtttttttt------------ s panTro5.chr4 192910432 334 + 194502333 atttatatAACt--------tttt-ttttttttt--tttgagatggagtctc------tgtcacccaggctggagtgaagtggtgccatcttggctcactgcaacccccacctcctggg-tcaagagattctcctgcctcagcttcccaagtagctaggattacaggctaccacctgtgtgattacgggccaccacgcctgggtaatttttgtatttttagttcgagatggggtttcaccatgttggccaggctgatcttgaactcctgacctca--tgatccacccgccttggcct--c-caaagtgctcggattacaggcatgaggcactgcacttggcTTATAACAtttttttt------------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794114 333 + 195804263 atttatattaAC--------tttt-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtggtgccatcttggctcactgcaacccccacctcctggg-tcaagagattctcctgcctcagcttcccaagtagctaggattacaggctaccacctgtgtgattacgggccaccacgcctgggtaatttttgtatttttagttcgagatggggtttcaccatgttggccaggctgatcttgaactcctgacctca--tgatccacccgccttggccttcc-taaagtgctcggattacaggcatgaggcactgcacttggcTTATAACAtttttttt------------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831375 331 + 4876863 atttatatAACt--------tttt-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtggtgccatcttggctcactgcaacccccacctcctggg-tcaagagatgctcctgcctcagcttcccaagtagctaggattacaggctaccacctgtgtgattacgggccaccacgcctggctaatttttgtatttttagtttgagatggggtttcaccatgttggccaggctgatcttgaactcctgacctca--tgatccgcccgccttagcct--c-caaagtgctgggattacaggcatgaggcactgagcctggcTTATAACttttttttt------------ i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189004491 300 + 190429646 aCGTATATAAC----------TTA-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatgtcatcttggctcactacaacccccacctcctggg-tcaagagattctcctgcctcagcttcccgagtggc-----------------------------atatgccaccatgcccggtgaatttttgtacttttagttcaagacggggttttcccatgttggccaggctgatcttgaactcctgatctca--tgatctgcccgcctcagcct--c-caaagtgctgggattataggcgtgaggcactgcgcccagcTTTTAACtttgttttt------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947266 304 + 189454096 aCGTATATAACt------ttatta-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatggcatcttggctcactacaacccccacctcctggg-tcaagagattctcctgcctcagcttcccgagtggc-----------------------------atatgccaccatgcccggcgaatttttgtacttttagttcaagacggggttttaccatgttggccaggctgatcttgaactcctgatctca--tgatctgcccgcctcagcct--c-caaagtgctgggattataggcgtgaggcactgcgcccagcTTATAACtttgttttt------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24338967 305 - 25927173 aCGTATATAACT------TCATTAtttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatgtcatcttggctcactacaacccccacctcctggg-tcaagagattctcctgcctcagcttcccgagtggc-----------------------------atatgccaccatgcccggtgaatttttgtacttttagttcaagacggggttttaccatgttggccaggctgatcttgaactcctgatctca--tgatctgcccgcctcagcct--c-caaagtgctgggattataggcgtgaggcactgcgcccagcTTATAACtttgttttt------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3368692 308 + 4669795 aCGTATATAACT--ATTATTAttt-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatgtcatcttggctcactacaacccccacctcctggg-tcaagagattctcctgcctcagtttcccgagtggc-----------------------------atatgccaccatgcccggcgaatttttgtatttttagttcaagatggggttttaccatgttggccaggctgatcttgaactcctgatctca--tgatctgcccgccttagcct--c-caaactgctgggattacaggcgtgaggcactgcgcccagcTTATAACtttgttttt------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326347 310 + 135778131 aCATATATAACTttattattatta-ttatttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatgtcatcttggctcactacaacccccacctcgtggg-tcaagagattctcctgcctcagcttcccgagtggc-----------------------------atatgccaccatgcctggcgaagttttgtatttttagttcaagacggggttttaccatgttggccaggctgatcttgaactcctgatctca--tgatctgcctgcctcagcct--c-cagagtgctgggattacaggcgtgaggcactgcgcccagcTTATAACtttgttttt------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780351 307 - 2847728 aCATATATAACT---TTATTATTA-ttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtgatgtcatcttggctcactacaacccccacctcctggg-tcaagagattctcctgcctcagtttcctgagtggc-----------------------------atatgccaccatgcccggcgaatttttgtatttttagttcaagatggggttttaccatgttggccaggctgatcttgaactcctgatctca--tgatctgcccgcctcagcct--c-caaactgctgggattacaggcgtgaggcactgcgcccagcTTATAACtttgttttt------------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 894745 308 + 2368649 acttatatAACT---TTATTATTAtttttttttt-----gagatggagtctc------tgtcacccaggctggagtgaagtggtgtcatcttggctcactacaacccccaactcctggg-tcaagagattctcctgcctcagcttcctgagtggc-----------------------------atatgccaccatgcctggcgaatttttgtatttttagctcaagacggagtttcaccatgttggccgggctgatcttgaactcctgacctcg--tgatctgcccacctcagcct--c-caaagtgccgggattacaggtgtgaggcactgtgcccagcTTATAACtttgttttt------------ i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11237962 331 - 11315646 atttttgcattc--------atgt-tTTTTCTCTAGGAGgggacagagtcttactccattgcaccctaggtagagtgccatggcatcatcatagctcatagtaacctcaaagtcttgtgctcaagcaaacctcttgcctcagcctcctgagtcgctgggattgcaagt----------------gcccaccatcacacctggctagtttatctattttaagc-agagacagggtcttgcag--------aggctagtcttgaacccctaaccacaatcaatccacccaacttgtctt--cttagagtcctgggcttaccagtgtgagtctctgt--ccagccTGcatctatgtttatagcagcattatt i otoGar3.GL873580 I 1991 I 371 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e nomLeu3.chr7b 112721190 236 + 115148730 M a score=45.000000 s hg38.chr4_KI270789v1_alt 123347 1 + 205944 -------t s panTro5.chr4 192910766 1 + 194502333 -------t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794447 1 + 195804263 -------t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831706 1 + 4876863 -------t i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189004791 6 + 190429646 ttgtg--t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947570 7 + 189454096 ttgtg-tt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339272 6 - 25927173 ttgtg--t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369000 6 + 4669795 ttgtg--t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326657 6 + 135778131 ttgtg--t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780658 8 - 2847728 ttgtgttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895053 5 + 2368649 tttt---t i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e aotNan1.NW_018492112v1 3397056 3531 - 5030052 I e saiBol1.JH378165 13105805 4541 - 14256875 I e nomLeu3.chr7b 112721190 236 + 115148730 M e otoGar3.GL873580 11238293 371 - 11315646 I a score=145771.000000 s hg38.chr4_KI270789v1_alt 123348 32 + 205944 tttttttgagacagagtctcactctgtcgcct s panTro5.chr4 192910767 30 + 194502333 ttttt--gagacagagtctcactctgtcgcct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794448 28 + 195804263 ttt----gagacagagtctcactctgtcgcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831707 31 + 4876863 tttttt-gagacagagtctcactctgtcgcct i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189004797 32 + 190429646 tttttttgaaacagagtctcgctttgtcgcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947577 32 + 189454096 tttttttgaaacagagtctcgctttgtcgcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339278 32 - 25927173 tttttttgaaacagagtctcgctttgtcgcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369006 32 + 4669795 tttttttgaaagagagtctcgcattgtcacct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326663 32 + 135778131 tgtttttgaaacagagtctcgctctgttgcct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780666 32 - 2847728 tttttttgaaacagagtcttgctttgtcacct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895058 32 + 2368649 tttttttgaaacagagtctcgctctgtcgcct i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3400587 32 - 5030052 tttttttgtgacggagtctcacactgtcaccc i aotNan1.NW_018492112v1 I 3531 C 0 e calJac3.chr3 189619056 1597 - 190850796 I e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e nomLeu3.chr7b 112721190 236 + 115148730 M e otoGar3.GL873580 11238293 371 - 11315646 I a score=346365.000000 s hg38.chr4_KI270789v1_alt 123380 60 + 205944 agactggagtgcagtggtgcgatctcagctcactgcaacctctgcatcc--cgggtgcaagt s panTro5.chr4 192910797 60 + 194502333 agactggagtgtggtggtgcgatctcagctcactacaacctctgcatcc--cgggtgcaagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794476 60 + 195804263 agactggagtgtggtggtgcgatctcagctcactacaacctctgcatcc--cgggtgcaagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831738 60 + 4876863 agactggagtgcagtggtgcgatctcagctcactacaacctctgcatcc--tgggtgcaagt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189004829 60 + 190429646 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--taggtgcaagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947609 60 + 189454096 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--taggtgcaagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339310 60 - 25927173 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--taggtgcaagc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369038 60 + 4669795 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--taggtgcaagc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326695 60 + 135778131 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--taggtgcaagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780698 60 - 2847728 agactgtagtgcggtggtgcgatcttagctcactacaacttctgcatcc--taggtgcaagc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895090 60 + 2368649 agactgtagtgcggtggtgcgatcttagctcactacaacctctgcatcc--tgggtacaagc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620653 57 - 190850796 aggctggagtgcagtcgtgtgatcttggc-cactacagtctctgctctctgagggtgt---- i calJac3.chr3 I 1597 C 0 s aotNan1.NW_018492112v1 3400619 56 - 5030052 aggctggagtgcagtcgtgcgatcttggctcactacaatctctgcttct--aggatgc---- i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e nomLeu3.chr7b 112721190 236 + 115148730 M e otoGar3.GL873580 11238293 371 - 11315646 I a score=455627.000000 s hg38.chr4_KI270789v1_alt 123440 60 + 205944 gattctcctgcctcagcctcccaagtagctgggactacaggcacctgccaccacatctgg s panTro5.chr4 192910857 60 + 194502333 gattctcctgcctcagcctcccaagtagctgggactacaggcacctgccaccacatctgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794536 60 + 195804263 gattctcctgcctcagcctcccaagtagctgggactacaggcacctgccaccacatctgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831798 60 + 4876863 gattctcctgcctcagcctcccaagtagctgggactacaggcacctgccaccacatccgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721426 60 + 115148730 gattctcctgcctcagcctcccatgtagctgggactacaggcacctgccaccacatccgg i nomLeu3.chr7b M 236 C 0 s rheMac8.chr5 189004889 60 + 190429646 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtccgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947669 60 + 189454096 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtccgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339370 60 - 25927173 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtccgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369098 60 + 4669795 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtccgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326755 60 + 135778131 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtatgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780758 60 - 2847728 gattctcctgcctcagcctcctgagtagctgggactacaggcacctgccaccatgtccgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895150 56 + 2368649 gattct----cctcagcctcctgagtagctgggactacaggcacctgtcaccatgtccgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620710 60 - 190850796 gattctcctgcttcagcctcccaaccagctgggactacaggtgcctgccaccacgcctgg i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3400675 60 - 5030052 aattctcctgcctcagcttcccaagcagctgggactacaggtacctgccgccatgcctga i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1001030 4676 - 2196201 I e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e otoGar3.GL873580 11238293 371 - 11315646 I a score=634612.000000 s hg38.chr4_KI270789v1_alt 123500 69 + 205944 ctaatttttgtatttttagtaaaggcgaggtttcatcattttgcccaggctgttctcaaactcctgacc s panTro5.chr4 192910917 69 + 194502333 ctaatttttgtatttttagtaaaggcgaggtttcatcattttgcccaggctgttctcaaactcctgacc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794596 69 + 195804263 ctaatttttgtatttttagtaaaggcgaggtttcatcattttgcccaggctgttctcaaactcctgacc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831858 69 + 4876863 ctaatttttgtatttttagtaaaggcaaggtttcatcattttgcccaggctgttctcaaactcctgacc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721486 69 + 115148730 ctaatttttgtatttttagtagaggtgaggtttcatcattttgctcaggctgttctcaaactcctgacc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189004949 69 + 190429646 ctaatttttgtatttttagtagagatgaggtttcatcattttgcccaggctgttctcaaactcctgacc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947729 69 + 189454096 ctaatttttgtatttttagtagagatgaggtttcatcattttgcccaggctgttctcaaactcctgacc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339430 69 - 25927173 ctaatttttgtatttttagtagagatgaggtttcatcattttgcccaggctgttctcaaactcctgacc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369158 69 + 4669795 ctaatttttgtatttttagtagagatgagggttcatcattttgcccaggctgttctcaaactcctgacc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326815 69 + 135778131 ctaatttttgtatttttagtagagatgaggtttcatcattttgcccaggctgttctcaaactcctgacc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780818 69 - 2847728 ctaatttttgtatttttagtagagatgaggtttcatcattttgcccaggctgttctcaaactcctgacc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895206 69 + 2368649 ctaatttttatatttttagtagagatgaggtttcgtcattttgcccaggcttttctcaaactcctgacc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620770 69 - 190850796 ctaatttttgaatttttagtagggatgaggtttcaccattttgcccagcccgttctcaaactcctgacc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1005706 69 - 2196201 ctaatttttgtatttctagtagagatgaggtttcaccattttgcccagactgttctcaaacccctgacc i cebCap1.NW_016107886v1 I 4676 C 0 s aotNan1.NW_018492112v1 3400735 69 - 5030052 ctaatttttgtatttttagtagagatgaggtttcaccattttgcccaggctgttctcaaactcctgacc i aotNan1.NW_018492112v1 C 0 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I e otoGar3.GL873580 11238293 371 - 11315646 I a score=19710.000000 s hg38.chr4_KI270789v1_alt 123569 2 + 205944 tc s panTro5.chr4 192910986 2 + 194502333 tc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794665 2 + 195804263 tc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831927 2 + 4876863 tc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721555 2 + 115148730 tc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005018 2 + 190429646 tc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947798 2 + 189454096 tc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339499 2 - 25927173 tc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369227 2 + 4669795 tc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326884 2 + 135778131 tc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780887 2 - 2847728 tc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895275 2 + 2368649 tc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620839 2 - 190850796 tc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1005775 2 - 2196201 tc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3400804 2 - 5030052 tc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11238664 2 - 11315646 ta i otoGar3.GL873580 I 371 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e dasNov3.JH570353 1448119 3543 - 2520184 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I a score=52605.000000 s hg38.chr4_KI270789v1_alt 123571 5 + 205944 agata s panTro5.chr4 192910988 5 + 194502333 agata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794667 5 + 195804263 agata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831929 5 + 4876863 agata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721557 5 + 115148730 agata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005020 5 + 190429646 agata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947800 5 + 189454096 agata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339501 5 - 25927173 agata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369229 5 + 4669795 agata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326886 5 + 135778131 agata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780889 5 - 2847728 agata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895277 5 + 2368649 agata i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620841 5 - 190850796 aggta i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1005777 5 - 2196201 agata i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3400806 5 - 5030052 agata i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11238666 5 - 11315646 tggta i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1451662 5 - 2520184 AGAAA i dasNov3.JH570353 I 3543 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e canFam3.chr16 16955195 9145 - 59632846 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I a score=56739.000000 s hg38.chr4_KI270789v1_alt 123576 6 + 205944 a-CTTAT s panTro5.chr4 192910993 6 + 194502333 a-CTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794672 6 + 195804263 a-CTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831934 6 + 4876863 a-CTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721562 6 + 115148730 a-CTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005025 6 + 190429646 a-CTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947805 6 + 189454096 a-CTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339506 6 - 25927173 a-CTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369234 6 + 4669795 a-CTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326891 7 + 135778131 accTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780894 6 - 2847728 a-CTTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895282 6 + 2368649 a-CTTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620846 6 - 190850796 a-CTTAC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1005782 6 - 2196201 a-cttat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3400811 6 - 5030052 a-CTTAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11238671 6 - 11315646 a-cttct i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16964340 6 - 59632846 a-ctttt i canFam3.chr16 I 9145 C 0 s dasNov3.JH570353 1451667 6 - 2520184 G-CCTAA i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e mm10.chr8 86612456 1885 - 129401213 I e saiBol1.JH378165 13105805 4541 - 14256875 I a score=880079.000000 s hg38.chr4_KI270789v1_alt 123582 93 + 205944 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAAA-ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACCCAAATTGCTgagatggcatggagg s panTro5.chr4 192910999 93 + 194502333 GTAAC---TTTTATATAG-GTGTATTTTATCACACTTAAAA-ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACCCAAATTGCTgagacagcatggagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794678 93 + 195804263 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAAA-ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACCCAAATTGCTgagacagcatggagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3831940 93 + 4876863 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAAT-ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACCCAAATTGCTgagacggcatggagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721568 93 + 115148730 ATAAC---TTTTATATAG-GTATATTTTATCACACTTAAAA-ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagatggcatggagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005031 92 + 190429646 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACGT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagacggcatggagg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947811 92 + 189454096 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACGT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagacggcatggagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339512 92 - 25927173 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACGT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagacggcatggagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369240 92 + 4669795 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACGT----CTTAAGAA--ATTCAGCCAGCACAAATTGCGgagacggcatggagg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326898 92 + 135778131 ATAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagacagcatggagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780900 92 - 2847728 GTAAC---TTTTATATAG-GTATATTTTATCACACTTAAA--ATATTAA--------CACGA----CTTAAGAA--ATTCAGCCAGCACAAATTGCGgagacggcatggagg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895288 92 + 2368649 ATAAC---TTTTGTATAG-GTATATTGTATCACACTTAAA--ATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACATAAATTGCTgagacggcatggagg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620852 94 - 190850796 GTAAC---TTTTATATAT-GTGTATTTAATCACAATTAAAACGTATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagatagcatgtaca i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1005788 94 - 2196201 ataac---ttttatatat-gtatatttaatcacacttaaaaaaTATTAA--------CACAC----CTTAAAAA--ATTCAGCCAACACAAATTGCTgagacagcatgcaca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3400817 94 - 5030052 ATAAC---TTTTATGTAC-GTATATTTAACCACACTTAAAAAATATTAA--------CACAT----CTTAAGAA--ATTCAGCCAACACAAATTGCTgagacagcatgcaca i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11238677 95 - 11315646 ataac---ttttatgttgtgcctattttatcacaattaaaaaaTATTGA--------TGTGC----CTTAAGAA--ATCCAGCAAACCCAGATTGCCCAGATCACATGGAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86614341 100 - 129401213 GTACA---TTTTATAAAA-TTATGCTTATCCACACTCAAAG-GAATTAAATTGGATCCATAT----TTTATGAAGGGCTCAAAAAGCAT---TGGCTAAAACTGCACAGTGA i mm10.chr8 I 1885 I 5 s canFam3.chr16 16964346 98 - 59632846 ataacatttattatttta-TTGTATTTTGTGATTATTAT---TTTTTAA--------CTCATGAACTTTAAAAA--ATTTAGCAAACACAAACTGATAAgacagcatagtgt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1451673 88 - 2520184 TTTAC---TGGTACATGA-GAGTATGCTATAGGTTTTCTCC-ATATTAA--------AGCAA--------AGAA--ATTTACTAAACATAAGTGG-TAAGAAAACACTgtgt i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I e saiBol1.JH378165 13105805 4541 - 14256875 I a score=2486172.000000 s hg38.chr4_KI270789v1_alt 123675 246 + 205944 tatgg-----aaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctactacgttctaatgctatgacctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--cttatagaggcatgatgaagagtaattgagatta---tgttattta-cagtct-ctggcacagcctgtggctctcc-acaggtacactgcaatgaatCTTCCTTTGCATTTTCCTC s panTro5.chr4 192911092 246 + 194502333 tatgg-----aaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctactacgttctaatgctatgacctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgttgacca--cttatagaggcatgatgaagagtaattgagatta---tgttattta-cagcct-ctggcacagcctgtggctctcc-acaggtacactgcaatgaatCTTCCTTTGCATTTTCCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192794771 246 + 195804263 tatgg-----aaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctacgttctaatgctatgacctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--cttatagaggcatgatgaagagtaattgagatta---tgttattta-cagcct-ctggcacagcctgtggctctcc-acaggtacactgcaatgaatCTTCCTTTCCATTTTCCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832033 245 + 4876863 tatgg-----aaagagc-----ttttcaagctagaaagacct---gagtttgaaatgagacctaagttctacta-gttctaatgctatgacctcag---------agat-----------gtca--cagag-tcacgttg------------acacgcagcttcctcatat----tatgcgatgacca--cttatagaggcatgatgaagagtaactgagatta---tgttattta-cagtct-ctggcacagcctgtggctctcc-acaggtacactgcaatgaatCTTCCTTTGCATTTTCCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721661 245 + 115148730 tatga-----aaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttctaatgctatgacctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgccatgacca--cttgtagaggtatgatgaagagtaattgagatta---tg-tattta-cggtct-ctggcacagcctgtggctctcc-acaggtacgctgcaatgaatCTTCCTTTGCATTTTCCTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005123 247 + 190429646 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatgctatggcctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--tttgtagaggtatgatgacgagtaattgaggttg---tg-tattta-CGGTCTCCCGGCATGGCCTGTGACTCTCC-ACAGGTACACTGCAATGAATCTTCCTTTGCGTTTTCCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187947903 247 + 189454096 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatgctatggcctcag---------agat-----------gtca--tagag-tcacgctg------------acactcagcttcctcatAT----TATGCGATGACCA--TTTGTAAAGGTATGATGACGAGTAATTGAGGTTG---TG-TATTTA-CGGTCTCCCGGCATGGCCTGTGACTCTCC-ACAGGTACACTGCAATGAATCTTCCTTTGCGTTTTCCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339604 247 - 25927173 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatgctatggcctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--tttgtagaggtatgatgacgagtaattgaggttg---tg-tattta-CGGTCTCCCGGCATGGCCTGTGACTCTCC-ACAGGTACACTGCAATGAATCTTCCTTTGCGTTTTCCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369332 245 + 4669795 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatactatggcctcag---------agat-----------gtca--taaag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--tttgtagaggtatgatgacgagtaattgaggttg---tg-tattta-cagtct-ccggcatggcctgtgactctcc-acaagt-cactgcaatgaatCTTCCTTTGCATTTTCCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134326990 244 + 135778131 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatgctatggcctcag---------agat-----------gtc----agag-tcacgttg------------acactcagcttcctcatAT----TATGCGATGACCA--TTTGTAGAGGTATGATGACGAGGAATTGAGGTTG---TG-TATTTA-CAGTCT-CCGGCATGGCCTGTGACTCTCCAACAAGT-CACTGCAATGAATCTTCCTTTGCAGTTTCCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2780992 245 - 2847728 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtttgaaatgagacctaagttctgctatgttttaatgctatggcctcag---------agat-----------gtca--tagag-tcacgttg------------acactcagcttcctcatat----tatgcgatgacca--tttgtagaggtatgatgacgagtaattgaggttg---tg-tattta-cagtct-ccggcatggcctgtgactctcc-acaagt-cactgcaatgaatCTTCCTTTGCATTTTCCTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895380 246 + 2368649 tatgg----aaaagagc-----ttttcaagctagaaagacct---aagtctgaaatgagacctaagttctgctgtgttttaatgctacggcctcag---------agat-----------gtca--tagag-tcacgttg------------acactgagcttcctcctat----tatgcgatgacca--tttgtagaggtatgatgaagagtgattgaggtta---tg-tattta-cagtct-ctggcacggcctgtgactctcc-acaggtacgctgcaatgaatCTTCCTTTGCATTTTCCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189620946 237 - 190850796 tgtgg-----aaagagc-----ttttc--------aagacct---acgtttgaaatgagacccaggttctgccaggttctaatgctatggcttcag---------agac-----------atca--tatgg-tcactctg------------acactcagcttcctcatat----tatgctatggcca--cttgtagaggtatgatgaggagtaattgagactg---tg-tatcta-cagtct-ctggcacagcctgTGGCTCTCC-ACAGGTACACTGCAATGATTCTTCCTTTGCGTTTTCCTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13110346 230 - 14256875 TAtgg-----aaagagc-----ttttcaagagagaaagacct---acgtttgaaatgagacccaagttctgctaggttctaatgctatgacttcag---------agag-----------gtca--tatag-tcactctg------------acactcagcttccttatAT----TACGCTGTGACCA--CTTGTAGAGGTATGAT---GAGTAATTGAGACTG---TG-TATTT--------------ACAGCCTGTGGCTCTCC-ACAGGTACACTGCAATGATTCTTCCTTTGCATTTTCCTC i saiBol1.JH378165 I 4541 C 0 s cebCap1.NW_016107886v1 1005882 215 - 2196201 tatgg-----aaagagc-----ttttcaaga----aagaccg---aagtttgaaatgagacccaagttctgctaggttctaatgctatgacttcag---------agac-----------gtca--tatag-tcactctg------------acgctcagcttcctcctat----catgctgtgacca--cttgtagcagtatgatgaggagtaattgagattg---tg-tatttg-cagtct-ctgctacagcctgtggctctcc-acagctaca--------------------------cctc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3400911 245 - 5030052 tatgg-----aaagagc-----ttttcaagagagaaagacct---aagtttgaaatgagacccaagttctgctgagttctaatgctatgacttcag---------agat-----------gtca--tatag-tcactctg------------acactcagctccctcatat----tatgctatgaaca--cttgtagaggtatgatgaggagtaattgagattg---tg-tattta-cagtct-ctggcacagcctgTGGCTCTCC-ACAGGTATGCTGCAATGATTCTTCCTTTGCATTTTCCTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11238772 219 - 11315646 TAtggacagaacaaagc-----ctttgaagctggaaagacct---aaacttgaaatga--------ttcccctactttctagtgttgtgtcctcaa---------aaat-----------gtca--c-tag-tcacatag------------acattcaggttcctcaaac----tgccctgtaa-------------------------ggtaatagagagaa---tg-tatttaccagtca-caggCACCATGTTTTTCCCTTG-ATGGATACACAGCAATGATCATTTCTTTGCATTTGCTCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86614446 235 - 129401213 -------TAAGCAGAGA-----GGTACCACTTTGAAAG-TCT---GAGGTTAAAGTGTAATGGAGGCTC-----------------ATGACCTTGGCTTTGTCCAGGAT-----------ATCA--CAGAGCTCAC---------------------CAGCAGTCTAGTAGAGTAAATATTGTTAACACTCTTATAGGGATACAATACAGAGCAATTGAAATTGACTTT-TACTCA-CAGTCA-TGAGTACAGCATATGAGCTCTT-ACAGATAGGCAGCAACAATTAACCCTTTGTAGTTATCTG i mm10.chr8 I 5 I 9 s canFam3.chr16 16964444 245 - 59632846 tttag--taagcaaagc-----ctttcaaggtggaaagacatttaatgcttgaaat--------acttctgctaatttctcaggttgttacttcag---------ggat-----------atcacctgaaa-tcattttg------------acaccgagga-cctcatat----tatactatgactac-tttgtaagaatatgattaggagtaattgagatta---tg-tattta-tagtcc-ctcgtacagcacctggcccctg-atatatgtgcagtaaTGATTATCCCTTTGCATTTGCCTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1451761 255 - 2520184 tatgg-----aaagagcaaagacttttaagctagaaagatat---atgcttgacatg--------gttctgctgccttct-gtgtggttacctcgt---------ggcTCTGACATTTGGGTCC--TCGTG-TTACACTGTGACTACCTTGTACATTCAGGT-CCCCGTGT----TACACTGTGACTAC-CCTGTAAAGG--------GGAGTCAT-AAGATGG---TG-TATTTA-CAGCCT-CTGGGACAACAGCTGGCCCTTG-ATGGGCACTCAGCAATGATTACGCTCTTGCATGCTCTCC i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3952687 3342 + 3993831 I e micMur3.chr14 17512631 3182 - 93316391 I a score=5022993.000000 s hg38.chr4_KI270789v1_alt 123921 385 + 205944 AGGTAATAGTAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATGTAAATATTAATTTCACTTAGATGATCTAATTCA-Gtttt---tacagcatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcattacgaattatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---taTTGCTGTGATTCAACACCATATTTTCTTAATTCAATTTCATCGTTATTTATATGGTACAATT-AGGAAA--GG-AAAAAGTAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCTAAGATA-AAAAAAAA s panTro5.chr4 192911338 385 + 194502333 AGGTAATAGTAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATGTAAATATTAATTTCACTTAGATGATCTAATTCA-Gtttt---tacagcatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcattacgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---taTTGCTGTGATTCAACACCATATTTTCTTAATTCAATTTCATCGTTATTTATATGGTACAATT-AGGAAA--GG-AAAAAGTAATCCAAGCCCTATATTAAACCATATCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCTAAGATT-AAAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795017 384 + 195804263 AGGTAATAGTAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATGTAAATATTAATTTCACTTAGATGATCTAATTCA-Gtttt---tacagcatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcattacgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---taTTGCTGTGATTCAACACCATATTTTCTTAATTCAATTTCATCGTTATTTATATGGTACAATT-AGGAAA--GG-AAGAAGTAATCCAAGCCCTATATTAAACCATATCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCTAAGATT--AAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832278 385 + 4876863 AGGTAATAGTAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATGTAAATATTAATTTCACTTAGATGATCTAATTCA-Gtttt---tacagcatgctatggtttacaca-atcctttgtatag--tattttattttcctaa-cttttgaggtaagcattatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---taTTGCTGTGATTCAACACCATATTTTCTTAATTCAATTTCATCGTTATTTATATGGTACAATT-AGGAAA--GG-AAAAAGTAATCCAAGCCCTATAGTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCTAAGATT-AAAAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112721906 386 + 115148730 AGGTAATAGTAAGGTGTAATTGACCACAAATAGGTCTCTATGCTTTAAATGTAAATATTAATTTCACTTAGATGATCTAATTCA-Gtttt---tacagcattctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcattatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---taTTGCTGTGATTCAATACCATATTTTCTTACTTCAATTTCATTGTTATTTATATGGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTTCTTAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCTAAGATTAAAAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005370 378 + 190429646 AGGTAATAGCAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCCCGTAGATGATCAAATTTA-Gtttc---cacagtatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcgttatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---ta---TTGTGATTCAACACCATATTTTCTTACGTCAATTTCCTTGTTATTTATACGGTACAACT-AGGAAA--GGAAAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATC-----A-----------TTTTCCTTCCCAAGATT-AAAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948150 376 + 189454096 AGGTAATAGCAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCCCGTAGATGATCAAATTTA-GTTCC---CACAGTATGCTATGGTTTACACA-ATCCTTTATATAG--TATTTTATTTTCCTAA-CTTTTGAGGTAAGCGTTATGAATC--ATTT--TAACA----ATGGATGATCTGAATATAAAAGAGATTACAGGATTTGATTAAGATCATA---TA---TTGTGATTCAACACCATATTTTCTTACGTCAATTTCATTGTTATTTATACGGTACAACT-AGGAAA--GGAAAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATC-----A-----------TTTTCCTTCCCAAGATT-AAAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24339851 378 - 25927173 AGGTAATAGCAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCCCGTAGATGATCAAATTTA-Gtttc---cacagtatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcgttatgaatcatattt--taata----atggatgatctgaatataaaagagattacaggatttgattaagatcata---ta---TTGTGATTCAACACCATATTTTCTTATGTCAATTTCCTTGTTATTTATACGGTAAAACT-AGGAAA--GGAAAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATC-----A-----------TTTTCCTTCCCAAGATT-AAAAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369577 381 + 4669795 AGGTAATAGCAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCACGTAGATGATCAAATTTA-Gtttc---cacagtatgctgtggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcattatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---ta---TTGTGATTCAACACCATATTTTCTTACGTCAATTTCATTGTTATTTACATGGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT--AAAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327234 382 + 135778131 AGGTAATAGCAAGGTGTAATTGACTACAAGTAGGTCTCTATGCTTTAAATATAAATATTAATTTCACATAGATGATCAAATTTA-GTTTC---CACAGTATGCTATGGTTTACACA-ATCctttatatag--tattttattttcctaa-ctttggaggtaagcattatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---ta---TTGTGATTCAACACCATATTTTCTTACGTCAATTTCATTGTTATTTATATGGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT-AAAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781237 382 - 2847728 AGGTAATAGCAAGGTGTAATTGACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCATGTAGATGATCAAATTTA-Gtttc---cacagtatgctatggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcgttatgaatcatattt--taaca----atggatgatctgaatataaaagagattacaagatttgattaagatcata---ta---TTGTGATTCAACACCATATTTTCTTACGTCAATTTCATTGTTATTTATATGGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCCCTATATTAAACCATACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT-AAAAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 895626 384 + 2368649 AGGTAATAGCAAGGTGTAATT-ACTACAAATAGGTCTCTATGCTTTAAATATAAATATTAATTTCACTGAGATGATCAAATTTA-Gtttt---cacagcatgctgtggtttacaca-atcctttatatag--tattttattttcctaa-cttttgaggtaagcgttataaatcatattt--taaca----atggatgatctgaatataaaagagattacaggatttgattaagatcata---tattgttgtgattcaacaccatattttcttacttcaatttcattgttatttatatggtacaacT-AGGAAA--GG-AAAAAATAATCCAAGCCCTATGTTAAACCATACATGCTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT-AAAAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621183 375 - 190850796 G-GTAATGGCAAGGTGTAATGGACTGCAAATAGGTCTCTGTGATTTAAATGTAAATATTAA-----CTCAGATGCTCTGATTCA-GTTTtttaaacagcatgctatggtttacaca-ggacttcacatag--tattttattttcctaa-cttttgagggaagcattatgaaccatattt--taaac----atggatgatctgaatt--gaagagattgcaggatttgattaagatcata---taTTACTGTGATTCAACACGATGTTTTCT----TCAATTTCGTTGTTATTTACACAGTACAGCT-AGGAAA--GG--AAAAATAATCCAAGCCCTATTTTAAACCACACCTGCTGCTGAGTGTC--TTCAAAATCAGTTTA-----------TTTCCCTTCCCAAGATT-AAAAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13110576 373 - 14256875 A-GTAATGGCAAAGTGTAATGGACTACAAATAGGTCTCCGTGATTTAAATGTAAATATTAA-----CTTAGATGCTCTAATTCA-GTTTT---Aacagcatgccatggtttacaca-ggcctttacatagtatattttattttcctaa-cttttgaggtaagcattatgaactatattt--tttaa----atggaggatctgaatttaaaagagattgcaggat----ttaagatcata---taTTACTGTAATTCAACACAACATTTTCT----TCAATTTCTTTGTGATTTATATAGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCACTATTTTAAACCACACTTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTCCACAAGATT-AAAAAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006097 374 - 2196201 a-gtaatggcaAGGTGTGATGGACTACAAATAGGTCTCTGGGATTTAAAAGTAAATGTTAA-----CTTAGACGCTCTAATTCA-GTTTT---Aacagcatgctatggtttacaca-ggcctttacatag--tattttattttcctaa-cttttgaggtaagcattatgaatcatattt--taaaa----atggatgatccaaatttacaagagattgcaggatttgattaagatcata---taTTACTGTGATTCAACACAATATTTTCT----TCAATTTCGTTGTTATTTATATAGAACAGCT-AGAAAG--GA--AAAAGTAATCCAAGCCCTATTTTAAACCACACCTGTTGCTGAGTGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT-AAAAAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401156 375 - 5030052 A-GTAATGGCAAGGTGTAATGGACTACAAATAGGTCTCTGTGATTTAAATGTAAATATTAA-----CTTAGATGCTCTAATTCA-GTTTT---AATAGCATGCTGTGGTTTAAACA-GGCCTTTACACAG--TATTTTATTTTCCTAA-CTTTTGAGGTAAGCATTATGAACCATATTT--TAAAA----ATGGATGATCTGAATTTAAAAGAGATTACAGGATTTGATTAAGATCATA---TATTACTATGATTCAACACAATATTTTCT----TCAATTTCAGTGTTATTTATATAGTACAACT-AGGAAA--GG-AAAAAATAATCCAAGCCCCATTTTAAACCACACCTGTTGCTGAGCGTC--TTCAAAATCATTTTA-----------TTTTCCTTCCCAAGATT-AAAAAAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17515813 382 - 93316391 AGGTAATATCAAGGTGCAATTGACTACAAATAGGCCTCTATGATTTAAATGCAAATATCAACTTAACTGATATGAGCTAAtaca-ttttt---tatagcatgttatgatttatatagggcttttatatac--tactttattttcataaccttttgaggtaggcattataaatcttattt--tacca----atggatgatctgaataaaaaggag-ttacatgatttgcttaagatcaca---taTTGCCATGATTCAACACAATAGTTTCTTATTGCAATTTC----CTATTTATATTGTACAACT-AGGAAA--GG-AAAAAAAAATCTAAGCCCTATACTAAACCAGACCTGATGCTTAGTTTC--TTCAGAATCCTTTTA-----------GTTTTCTTCCCAAGATT-TAAAAACA i micMur3.chr14 I 3182 I 123 s proCoq1.NW_012145301v1 3956029 388 + 3993831 AGGTAATATCAAGGTGCAATTGACTACAAATAGGTCTCTATCATTTAAATGCAAATATCAACTTAACTGATATGAGCTAAtaca-ttttt---tatagcatgttatgatttatacagggcttttatatac--tactttattttcataaccttttgaggtaggcattataaatcttattt--taccaatggatggatgatctgaatataaaggag-ttacatgatttgcttaagatcaca---tattgccatgattcaacacaatattttcttactgcaatttc----ctatttatattgtacaacT-AGGAAAGGGG-GGAAAAAAATCTAAGCCCTATACTAAACCACACCTGATGCTTAGTTTC--TTCAGAATCCTTGTA-----------GTTTTCTTCCTAAGATT-TAAAAAAA i proCoq1.NW_012145301v1 I 3342 C 0 s otoGar3.GL873580 11238991 366 - 11315646 AGGTAATAGCAAGGTGAAATTGACTACAAATAGG--TCTGTGATTTAAATGCAAATATCAACTTAACTTATATGAGCTAAtaca-ttttt---tacagcatgttatgatatatacagagcttttatatgc--tactttcttttcacaacctattgaggtaggcaacttgaatcttattt--tacca----atggttgatctgaatgtgagggag-atacatgatttgcttaagctcTTA---TATTGCCATGATTCAACACATTATTTTCCTACTGCAGTTTG----CTATTTGTATTATACAAGT-AGGAAA---G-GAAGAAAGATCTAAGCCCAAT-------------TGATGCTTAGCTTC--TTCTGAGTCCTTTTA-----------GTTTTGTTCCGAAGATT-TAAAAAAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86614690 355 - 129401213 CAGTAGTAGCCAAGAATAATTGACTTTCCATGGAAATCTGTGATTTAAGTGTAATTACCAAGTTAACTTTGGTAGACCAATTAATACACT---TGTAACATATCACAGTCTATGTAGAGCTTTTATGTAC--TATCCAATTTTCAGTA-TCTCCGGAGACACCAATAT------TACTT--TACCA----GTGGATGACCTGAATGTAT----GATTATATAATTTCCTTAAAACTTAAAATTATTACCAGGAACTAATACAGAATTTTCCTACTGAAATTTCACTGTCATTTTTTTTTTATTGTT-CTGGAA--GT-AGATAA------------------GGGACATACTTG-------GTTTC--TTCAGAATCCTTTCC-----------ATTTTCTTTCTAAGATT-AAAAATAT i mm10.chr8 I 9 I 2 s canFam3.chr16 16964689 355 - 59632846 CGGTGATAGCATGGTGTAATTGACTACAAATAGGTGTCTATGATTTAAATGCAAATATCAACATGACGTATATGAGCTAATACA-TTTTT---TATAGCATA-----------GAG-GGCTTTTGCATAA--TATTTTATATTCATAACCTTTTGAGATAGGCATTAACAGTTTTATTTTATACCA----ATTTGTGGTCTAAAAATGAAATAA-TTCTATGATTAGCTTAAGATAGCA---CATTGCCATGATTCAACACAATGCTTCCCTATTATAATTTCACTGTTACTTAAATTATACGAGTAAAGGAA--AA-AAAAAAAAATCTAAGC-CTGCCAGAAACCATACTT--TGGGAAG---------AAAA---------------------TTTCTCTTAGAAAGT-AAAAAT-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1452016 378 - 2520184 AAACAGTAGCAAGGTGTAGTTGACTACAAATAGTGCTCAACCTTGAAGATACAAATGT-----------------GCTAACaca-atttt----attgtatattatattttacaaatggcttctatacac--taccttattttcatgaccttgctaggcagatgtaatcaatcttactt--tgcca----gtggacaatctgaaaatgaaagg--ttatatgatttgcttcagatcaca---cattgccgtgattcaaactgatattttcctactgccagttcaatgttatttctattataccacT-AAAAAA--GG-GGGAAA--ATCCGAGACCTATACGAAACCACACCTAATGCTCTTTTTCCTTTCAGAATCATTTTAATTCACTTTTTTTTTTCTTGTTGAGGTT-TGAAATAG i dasNov3.JH570353 C 0 C 0 a score=-7736.000000 s hg38.chr4_KI270789v1_alt 124306 3 + 205944 ATG s panTro5.chr4 192911723 3 + 194502333 ATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795401 3 + 195804263 ATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832663 3 + 4876863 ATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722292 3 + 115148730 ATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005748 3 + 190429646 ATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948526 3 + 189454096 ATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340229 3 - 25927173 ATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369958 3 + 4669795 ATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327616 3 + 135778131 ATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781619 3 - 2847728 ATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896010 3 + 2368649 GTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621558 3 - 190850796 AAT i calJac3.chr3 C 0 I 314 s saiBol1.JH378165 13110949 2 - 14256875 TG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006471 3 - 2196201 AAT i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3401531 3 - 5030052 AAT i aotNan1.NW_018492112v1 C 0 I 1 s proCoq1.NW_012145301v1 3956417 2 + 3993831 -TG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11239357 2 - 11315646 -TG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86615047 1 - 129401213 A-- i mm10.chr8 I 2 C 0 s canFam3.chr16 16965044 3 - 59632846 CTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1452394 1 - 2520184 --G i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17516195 123 - 93316391 I a score=369238.000000 s hg38.chr4_KI270789v1_alt 124309 29 + 205944 ATAGAATCCTACGTGCTTGTCT-GATGATT s panTro5.chr4 192911726 29 + 194502333 ATAGAATCCtatgtgcttgtct-gatgatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795404 29 + 195804263 ATAGAATCCTATGTGCTTGTCT-GATGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832666 29 + 4876863 ATAGAATCCtatgtgcttgtct-gatgatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722295 29 + 115148730 ATAGAATCCTATGTGCTTGGCT-GATGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005751 29 + 190429646 ATAGAATTCTATGTGCTTGTCT-GATGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948529 29 + 189454096 ATAGAATTCTATGTGCTTGTCT-GATGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340232 29 - 25927173 ATAGAATTCTATGTGCTTGTCT-GATGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369961 29 + 4669795 ATAGAATTCTATGCGCTTGTCT-GATGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327619 29 + 135778131 ATAGAATTCTATGTGCTTGTCT-GATGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781622 29 - 2847728 ATAGAATTCTATGTGCTTGTCT-GATGATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896013 29 + 2368649 ATAGAATCCTATGTGCTTGTCT-GATGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621875 29 - 190850796 ATAGAATCCTATGTGCTTGTCT-GATGATT i calJac3.chr3 I 314 C 0 s saiBol1.JH378165 13110951 29 - 14256875 ATAGAGTCCTATGTGCTTGTCT-GATGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006475 29 - 2196201 ATAGAATCCTATGTGCTTGTCT-GATGGTT i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3401535 29 - 5030052 ATAGAGTCCTATGTGCTTGTCT-GATGATT i aotNan1.NW_018492112v1 I 1 C 0 s proCoq1.NW_012145301v1 3956419 30 + 3993831 ATTGATTCCTATTTTCTTGTCTGGATGATT i proCoq1.NW_012145301v1 C 0 I 82 s otoGar3.GL873580 11239359 30 - 11315646 ACAGAATCCTATTATCTTGTCTTGATGATT i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86615048 24 - 129401213 ATCGAATT-GGTTCCTTTGGCT-GAT---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16965047 17 - 59632846 ------------TTTTTTGTCT-GATAATT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1452395 27 - 2520184 GCAGAATtctatttgaccag---gatgatt i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17516195 123 - 93316391 I a score=844141.000000 s hg38.chr4_KI270789v1_alt 124338 75 + 205944 -CGTAActtgaagtcagggattagatctcctctgtttcttagttttatt---c---ta-------tagccca------------tgaatata-ttaagc---att s panTro5.chr4 192911755 75 + 194502333 -cgtaacttgaagtcagggattggatctcctctgtttcttagttttatt---c---ta-------tagccca------------tgaacata-ttaagc---att i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795433 75 + 195804263 -CGTAActtgaagtcagggattagatctcctctgtttcttagttttatt---c---ta-------tagccca------------tgaatata-ttaagc---att i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832695 75 + 4876863 -cgtaacttgaagtcagggattagatctcctctgtttcttagttttatt---c---ta-------tagccct------------tgaatata-ttaagc---att i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722324 75 + 115148730 -CGTAActtgaagtcagggattatatctcctctgttttttagttttatt---c---tg-------tagccca------------tgagtata-ttaagc---att i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005780 75 + 190429646 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948558 75 + 189454096 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340261 75 - 25927173 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3369990 75 + 4669795 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327648 75 + 135778131 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCTA------------TGAGTATA-TTAAGC---ATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781651 75 - 2847728 -CGTAACTTTAAGTCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896042 75 + 2368649 -CATAACTTTAAGCCAGGGATTATATTTCCTCTGTTTTTTAGTTTTATT---C---TA-------TAGCCCA------------TGAGTATA-TTAAGC---ATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621904 75 - 190850796 -AGTAACTTGAAGTCAGGGATTGCATCTACTCTGTTTTTCAGTTTTGTT---C---TA-------TAGCCCA------------CGAATATA-TTAAGC---ATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13110980 75 - 14256875 -AGTAAcctgaagtcagggactgtatctcctctgttttttagttttatt---c---ta-------tagccca------------tggatata-ttaagc---att i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006504 75 - 2196201 -AGTAActagaagtcagggactgtatctcctctgttttttagttttatt---c---ta-------tggccca------------tgaatata-ttaagc---att i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401564 75 - 5030052 -AGTAActtgaagtcagggattgtatcttctctgtgttttagttttatt---c---ta-------tagccca------------tgaatata-ttaagc---att i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11239390 84 - 11315646 -GGTAACTTGAA-TTAGGAATTATGTCTCACCTGGTTTTCAGTCTTAATAGCC---CA-------TAGTTCA------AAGCCTTGGATATATTTATGC---TTT i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86615072 79 - 129401213 ---TAACTAGAATTCATGATCT---TCTCCTCTGCATTTCAGTGTTAGT---CATACA-------TCACTCA------GAACCTTGGCTAAA-ATAGAC---ATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16965065 91 - 59632846 -GATAACCCGAAGTCAGAGATTATATCTTACCTTCCTTTCAGTCTTACT---C---TAAAACCAGTAGTTCA------AAGTCCTACATATT-TTATGTGGGACT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1452422 87 - 2520184 aagcaacttgaggtcagaaattatatcatatccatctatt-ttcttact---c---tg-------cagcatacgctcaaagctttggatata-tcaggc---acc i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956449 82 + 3993831 I e micMur3.chr14 17516195 123 - 93316391 I a score=154482.000000 s hg38.chr4_KI270789v1_alt 124413 12 + 205944 caata--gacattt s panTro5.chr4 192911830 12 + 194502333 caata--gacattt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795508 12 + 195804263 caata--gacattt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832770 12 + 4876863 caaca--gacattt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722399 12 + 115148730 caata--gacattt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005855 12 + 190429646 CAACA--GACATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948633 12 + 189454096 CAACA--GACATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340336 12 - 25927173 CAACA--GACATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370065 12 + 4669795 CAACA--GACATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327723 12 + 135778131 CAACA--GACATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781726 12 - 2847728 CAACA--GACATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896117 12 + 2368649 CAACA--GACATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621979 12 - 190850796 CAACA--GGCATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111055 12 - 14256875 caata--gacattt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006579 12 - 2196201 caata--gacatct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401639 12 - 5030052 caata--gacattt i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3956531 12 + 3993831 CAATGTTAACAT-- i proCoq1.NW_012145301v1 I 82 C 0 s otoGar3.GL873580 11239474 10 - 11315646 CAATA--AATGT-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86615151 12 - 129401213 TAATA--AATATTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16965156 12 - 59632846 CAATA--AACATTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1452509 12 - 2520184 caata--aaccttt i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17516195 123 - 93316391 I a score=615145.000000 s hg38.chr4_KI270789v1_alt 124425 36 + 205944 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT s panTro5.chr4 192911842 36 + 194502333 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795520 36 + 195804263 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832782 36 + 4876863 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722411 36 + 115148730 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005867 36 + 190429646 GTTGAATTAAAATGTTATA---------------AAC---TATTGATCTGAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948645 36 + 189454096 GTTGAATTAAAATGTTATA---------------AAC---TATTGATCTGAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340348 36 - 25927173 GTTGAATTAAAATGTTATA---------------AAC---TATTGATCTGAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370077 36 + 4669795 GTTGAATTAAAATGGTATA---------------AAC---TATTGATCTGAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327735 36 + 135778131 GTTGAATTAAAATGGTATA---------------AAC---TATTGATCTGAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781738 36 - 2847728 GTTGAATTAAAATGGTATA---------------AAC---TATTGATCTGAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896129 36 + 2368649 GTTGAATTAAAATGGTATA---------------AAC---TATTGATCTGAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189621991 39 - 190850796 GTTGGATTAAAATGGTATA---------------AActgatattgatctgaaat i calJac3.chr3 C 0 I 4247 s saiBol1.JH378165 13111067 36 - 14256875 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006591 36 - 2196201 gttgaattaaAATGGTATA---------------AAC---TATTGATCTGAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401651 36 - 5030052 gttgaattaaAATGGTATA---------------AAC---TATTGATCCGAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516318 36 - 93316391 GTTGAACTAAAATGGTAAA---------------AGC---TATTGATCTGAAAT i micMur3.chr14 I 123 C 0 s proCoq1.NW_012145301v1 3956543 36 + 3993831 GTTGAACTAAAATGGTAAA---------------AGC---TATTGATCTGAAAT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11239484 36 - 11315646 GTTGAATTGAAATGGTAAG---------------AGT---TATTGATCTGAAAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86615163 47 - 129401213 ----AACTGATATGGCAAAAAGCGACAAGAATGCAAC---TATTTTCCTTAGGT i mm10.chr8 C 0 I 4 s canFam3.chr16 16965168 35 - 59632846 GTTGAACTGAAATGGTA-A---------------AAC---TATTGATCTGAAAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1452521 36 - 2520184 gatgaatTGAAGTGGTAAA---------------AAC---TATTGATCGAAAAC i dasNov3.JH570353 C 0 C 0 a score=325062.000000 s hg38.chr4_KI270789v1_alt 124461 24 + 205944 ACTGCAT--TTGAAGCTTGG---TACTTC s panTro5.chr4 192911878 24 + 194502333 ACTGCAT--TTGAAGCTTGG---TACTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795556 24 + 195804263 ACTGCAT--TTGAAGCTTGG---TACTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832818 24 + 4876863 ACTGCAT--TTGAAGCTTGG---TACTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722447 24 + 115148730 ACTGCAT--TTGAAGCTTGG---TACTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005903 24 + 190429646 ACTGCAT--TTGAAGCTTGG---TACTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948681 24 + 189454096 ACTGCAT--TTGAAGCTTGG---TACTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340384 24 - 25927173 ACTGCAT--TTGAAGCTTGG---TACTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370113 23 + 4669795 ACTGCAT--TTG-ATCTTGG---TACTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327771 24 + 135778131 ACTGCAT--TTGAAGCTTGG---TACTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781774 24 - 2847728 ACTGCAT--TTGAAGCTTGG---TACTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896165 24 + 2368649 ACTGCAT--TTGAAGCTTAG---TACTTC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13111103 24 - 14256875 ACTGCAT--TCGAAGCTTGG---TACTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006627 24 - 2196201 ACTGCAT--TTGAAGCTTGG---TACTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401687 24 - 5030052 ACTGCAT--TTGAAGCTTGG---TGCTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516354 23 - 93316391 ACTGCAT--TTGA-GCTTGA---TTCTCT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3956579 24 + 3993831 ACTGCAT--CTGAGGCTTGA---TTCTTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11239520 24 - 11315646 ATTGCAT--TGGAGGCTTGG---ttcttt i otoGar3.GL873580 C 0 I 283 s mm10.chr8 86615214 29 - 129401213 ATTGCACGATTTTGGTTTGGGTTTATTTT i mm10.chr8 I 4 I 2 s canFam3.chr16 16965203 24 - 59632846 ACTGCAT--CTGTGGCTTGG---TTCTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1452557 22 - 2520184 ATTGCAT--CTGAGACTTGG---TTTT-- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189622030 4247 - 190850796 I a score=1449123.000000 s hg38.chr4_KI270789v1_alt 124485 120 + 205944 ATGCATTTTGTTCATATCATTTATGTACTAAATTCAACTTTTTTTTTATTTTGCATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT s panTro5.chr4 192911902 119 + 194502333 ATGCATTTTGTTCATATCATTTATGTACTAAATTCAG-TTTTTTTTTATTTTGCATCCTGATTGTGTTTTCGTAAACATTTATTCTAATGCCAAAATTTAATATCAATAAATTATAT-CTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795580 118 + 195804263 ATGCATTTTGTTCATATCATTTATGTACTAAATTCAG--TTTTTTTTATTTTGCATCCTGATTGTGTTTTCGTAAACATTTATTCTAATGCCAAAATTTAATATCAATAAATTATAT-CTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832842 118 + 4876863 ATGCATTTTGTTCATATCATTTATGTACTAAATTCAA--TTTTTTTTATTTTGCATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722471 117 + 115148730 ATGCATTTTGTTCATCTCATTTATGTACTAAATTAAG---TTTCTTTATTTTGCATCCTCATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189005927 117 + 190429646 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948705 117 + 189454096 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340408 117 - 25927173 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370136 112 + 4669795 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAA-----TATAT-CTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327795 117 + 135778131 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781798 117 - 2847728 ATGCATTTTGTTCATATCATTTATGTACTAAATTAAG---TTTTTTTATTTTGAATCCTGGTTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896189 111 + 2368649 ATGCATTTTGTTCATATCATTTATGTACTAAA---------TTTTTTATTTTGAGTCCTGATTGTGTTTTCATAAACATTTATTCTAATGCTAAAATTTAATATCAATAAATTATAT-CTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13111127 111 - 14256875 ATGTGTTTTGTTCATATCATTTATGTATTAAG--------TTTTTTTAGATTACATCATGATTGTGTTTTCataaaaatttattctaatgataaaatttaatatcaa-aaattatat-GTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006651 108 - 2196201 ATGCGTTTCGTTCATGTCATTTATGTATTAAG--------TTTTTTTAGTTTACATCCTGATTGTGTTTTCATAAACATTTATTC---TGATAGAATTTAATATCAA-AAATTATAT-GTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401711 111 - 5030052 GTGCATTTTGTTCATATCATTTATGTATTAAG--------TTTTTTTAGTTTACATCCTGATTGTGTTTTCATAAACATTTTTTCTAATGATAAAATTGAATATCAA-AAGTTATAT-GTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516377 116 - 93316391 ATGTATCCTGTTCATATCATTTATGTAGTCATTTAAA---TGTT-TTATTTTGCATCCTGAGGGTGTTTTCATAAACATTTATTCAAATGCTAAAATTTAACTTTGATAAATCATAT-CTT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3956603 116 + 3993831 ATGCATCCTGTTCATATCATTTATGTAGTCATTTAAA---TTTT-TTATTTTGCATCCTGAGGGTGTTTTCATAAGCATTTATTTAAATGCTAAAATTTAACTTTGATAAATCGTAT-CTT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11239827 117 - 11315646 ATGTGTTCTGTT-GTGTCATTTATGTAGCCATTCAAA---TTTTAAAATCTTGCATACTGAGTGTATATTCACAAGCATTTATTCAGGTGCTAAAATTTAACATTAACAAATCATATATTT i otoGar3.GL873580 I 283 C 0 s mm10.chr8 86615245 116 - 129401213 TTACAACCTGTTGCTTTTGCTTATGGGGTAATTTAAA----TCTTTTACTTAGAGTCTTCATTATGCTTTTATAAAAATCCACCCACATGTTAAAATTTGACTTTAATAAGTTATAT-TTT i mm10.chr8 I 2 C 0 s canFam3.chr16 16965227 116 - 59632846 ATGCATTCTATTCATATCCTTTATGTAGTAATTTCAT---TTTTAAAATTTTGCATTCTAATTGT-CTTTCATAAAAATACACCCAACTGCTAAAATGTAACATTGTTAAATTTTAC-TCT i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1452579 114 - 2520184 --GAATCCCATTCAGATGATTTATGTAGTAATTTAAA----TGTTTTGTTTTGCTTCTTGATTGTGTTTTCATAAAAATTCTTTCAAATGCTAAGATTTCACACTGATAAATTATAT-TTC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189622030 4247 - 190850796 I a score=620953.000000 s hg38.chr4_KI270789v1_alt 124605 41 + 205944 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT s panTro5.chr4 192912021 41 + 194502333 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795698 41 + 195804263 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3832960 41 + 4876863 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722588 41 + 115148730 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006044 41 + 190429646 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948822 41 + 189454096 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340525 41 - 25927173 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370248 41 + 4669795 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327912 41 + 135778131 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781915 41 - 2847728 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGCGTGATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896300 37 + 2368649 GGCGAAATAAT-TT----AACTCGTATTTGCTTGGTGTGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626277 41 - 190850796 GGAGAATTAAT-TTAACAAACTCCTATTTGCTTGGTGTGGTT i calJac3.chr3 I 4247 C 0 s saiBol1.JH378165 13111238 41 - 14256875 GGAGAAACAAT-TTAACAAACTTGTATTTGCTTGGTGTGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006759 41 - 2196201 GGAGAAATAAT-TTAACAAACTCATATTTGCTTGGTGTGATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401822 41 - 5030052 GGGGAAATAAT-TTAACAAACTCGTATTTGCTTGGTGTGATT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516493 36 - 93316391 GGGAAAATAAC------AAACTTGTATTTTCTTGGTGTAATT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3956719 38 + 3993831 GGGAAAATAAC-TT---AAACTCATATTTGCTTGGTGTAATT i proCoq1.NW_012145301v1 C 0 I 415 s otoGar3.GL873580 11239944 41 - 11315646 GGGAAAATAAG-TTAACAAATTTATATTTTCTTAGTATGATT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86615361 40 - 129401213 AGAAAATTAAT-TTAA-GAATTTGTAATTGTTTTGTGTATTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16965344 42 - 59632846 GGAAAAAAAATATCAGCAAGCATATATTCACCTGGTGTAGTT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1452693 41 - 2520184 AGGAGAAGAAG-TTAACAAACTTTTGTTTGTTTGGTATAATT i dasNov3.JH570353 C 0 C 0 a score=761409.000000 s hg38.chr4_KI270789v1_alt 124646 68 + 205944 ATCAAGACTGCAGAAACTTTggcaatata-----acataatgggga-----------------------------------------------------------------aa-aaattg-gacaggaatc---agaactaac- s panTro5.chr4 192912062 68 + 194502333 ATCAAGACTGCAGAAACTTTggcaatata-----acataatgggaa-----------------------------------------------------------------aa-aaattg-gacaggaatc---agaactaac- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795739 68 + 195804263 ATCAAGACTGCAGAAACTTTggcaatata-----acataatgggaa-----------------------------------------------------------------aa-aaattg-gacaggaatc---agaactaac- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833001 68 + 4876863 ATCAAGACTGCAGAAACTTTggcaatata-----acataatgggaa-----------------------------------------------------------------aa-aaattg-gacaggaatc---agaactaac- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722629 68 + 115148730 ATTGAAACTGCAGAAACTTTggcaatata-----acataatgggaa-----------------------------------------------------------------aa-aaattg-gacaggaatc---agaactaac- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006085 69 + 190429646 ATCAAAACTGCAGAATCTTTggcaatata-----acatactgggaa-----------------------------------------------------------------aagaaattg-gacagaaatc---agaactaac- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948863 69 + 189454096 ATCAAAACTGCAGAATCTTTGGCAATATA-----ACATACTGGGAA-----------------------------------------------------------------AAGAAATTG-GACAGAAATC---AGAACTAAC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340566 64 - 25927173 ATCAAAACTGCAGAATCTTTggcaat----------atactgggaa-----------------------------------------------------------------aagaaattg-gacagaaatc---agaactaac- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370289 69 + 4669795 ATCAAAACTGCAGAATCTTTggcaatata-----acatactgggaa-----------------------------------------------------------------aagagattg-gacagaaatc---agaactaac- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134327953 69 + 135778131 ATCAAAACTGCAGAATCTTTggcaatata-----acatactgggaa-----------------------------------------------------------------aagaaattg-gacagaaatc---agaactaac- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2781956 69 - 2847728 ATCAAAACTGCAGAATCTTTggcaatata-----acatactgggaa-----------------------------------------------------------------aagaaattg-gacagaaatc---agaactaac- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896337 69 + 2368649 ATCAAAACTGCAGAAACTTTggtaatata-----acatactgggaa-----------------------------------------------------------------aagaaattg-gacagaaatc---agaactaac- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626318 134 - 190850796 ATCACAACTGCAGTAACTTTGGCaatata-----atataatttaaaaaaaaGTCGTAAGTTATCATCTTAACCTTGTTTTTTTGAGATGGAGTCTCAcactgtgagacaggaaaaaactg-gacaggaatc---agaactaac- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111279 69 - 14256875 ATCACAACTGCAGTAACTTTggcaatata-----atataatgaaaa-----------------------------------------------------------------aaaaaattg-gacaggaatc---agaactaac- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006800 67 - 2196201 ATCACAACTGCAGTAACTTTggcagtata-----atataatggg-------------------------------------------------------------------gaaaaattg-gacaggaatc---agaactaac- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401863 70 - 5030052 ATCACAACTGCAGTAACTTTggcaacata-----atataatgggaaa----------------------------------------------------------------aaaaaattg-gacaggaatc---agaactaac- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516529 73 - 93316391 TTCATAACTGCAGATTCTTTggcagtatgatattatacaatggaaa-----------------------------------------------------------------ca-aatttg-gacaggaatc---agaactaac- i micMur3.chr14 C 0 I 338 s otoGar3.GL873580 11239985 68 - 11315646 ATCACAACCACAGAAGGTTTGAGagtatg-----atacaatggaaa-----------------------------------------------------------------ca-aatttg-gacaggaata---agaactaac- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86615401 69 - 129401213 GTTATAGTTGCAGAA-CCTTAAAAGGATG-----TTATAAATGGAA-----------------------------------------------------------------GCTTGCTTGAAACAGCCACC---AGAATCAAT- i mm10.chr8 C 0 I 1 s canFam3.chr16 16965386 71 - 59632846 AGCAC-ACTGTAGAATCCTTggcaatata-----acataatggaaa-----------------------------------------------------------------gaaattttg-gataagaatcaggagaactgcc- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1452734 72 - 2520184 ATGACAACTGCAGACTCTTTGGCAAAATG-----ACATA-TAAAAA-----------------------------------------------------------------GAAATCCGG-GGCAGGAATTAGGAGAACTGAGT i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956757 415 + 3993831 I a score=1486147.000000 s hg38.chr4_KI270789v1_alt 124714 122 + 205944 cttcattatgggttc-----ctgga----atagc-----tccaat-ctattcaagtac-cctggagccaaa----catttaaatgctccctgcctggat---ttctgcatttccccaatggagatgataata---tttatctggccta s panTro5.chr4 192912130 122 + 194502333 cttcattatgggttc-----ctgga----atagc-----tccaat-ctattcaagtac-ccttgagccaaa----catttaaatgctccctgcctggat---ttctgcatttccccaatggagatgataata---tttatctggccta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795807 122 + 195804263 cttcattatgggttc-----ctgga----atagc-----tccaat-ctattcaagtac-ccttgagccaaa----catttaaatgctccctgcctggat---ttctgcatttccccaatggagatgataata---tttatctggccta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833069 122 + 4876863 cttcatcatgggttc-----ctgga----atagc-----tccaat-ctattcaagtac-ccttgagccaaa----catttaaatgctccctgcctggat---ttctgcatttccccaatggagatgataata---tttatctggccta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722697 122 + 115148730 cttcattatgggttc-----ctgga----atagt-----tctgat-ctattcaagtac-ccttgagccaaa----cattgaaatgctccctgcctggat---ttctgcatttccccaatggagatgataata---tttatctggccta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006154 122 + 190429646 cttcattatgggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-ccttgagccaaa----cgtttaaatgctccctgcctggat---ttctacatttccccaatggagatgataata---tttatatggccta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187948932 122 + 189454096 CTTCATTATGGGTTC-----CTGGA----TTAGC-----TCCGAT-CTATTCAAGTAC-CCTTGAGCCAAA----CGTTTAAATGCTCCCTGCCTGGAT---TTCTACATTTCCCCAATGGAGATGATAATA---TTTATATGGCCTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340630 122 - 25927173 cttcattatgggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-ccttgagccaaa----cgtttaaatgctccctgcctggat---ttctacatttccccaatggagatgataata---tttatatggccta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370358 122 + 4669795 cttcattatgggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-ccttgagccaaa----cgtttaaatgctccctgcctggat---ttctacatttccccaatggagatgataata---tttatatggccca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328022 122 + 135778131 cttcattataggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-ccttgagccaaa----cgtttaaatgctctctgccttgat---ttctacatttccccaatggagatgataata---tttacatggccta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782025 122 - 2847728 cttcattatgggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-ccttgagccaaa----cgtttaaatgctccctgcctggat---ttctacatttccccaatggagatgataata---tttatatggccta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896406 109 + 2368649 cttcattacgggttc-----ctgga----ttagc-----tccgat-ctattcaagtac-cctggagccaaa----cgtttaaacgctccctgcctggat---ttctacacttccccaatggagatgatgata---------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626452 121 - 190850796 cttcattatgagttc-----ctgga----ttagc-----tcctat-ccattcaagtac-ccttgagccaaa----catttaaatgct-cctgcctggat---ttctacatttttccgatgaagatgataata---tttatcctgccta i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111348 122 - 14256875 cttcattatgagttc-----ctgga----ttagc-----tcctat-ctattcaagtac-ccttgagccaaa----catttaaatgctccctgcctggat---ttctacatttttccaatgaagatgataata---tttatcctgccta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006867 122 - 2196201 cctcattatgagttc-----ctgga----ttagc-----tcctat-ctattcaagtac-ccttaagccaaa----catttaaatgctccctgcctggat---ttctacatttttccaatgaagatgataata---tttatcctgccta i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3401933 122 - 5030052 cttcattatgagttc-----ctgga----ttagc-----tcctat-ctattcaagtac-ccttgagccaaa----catttaaatgctccctgcctggat---ttccacatttttccaatgaagatgataata---tttatcctgccta i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240054 127 - 11315646 tttcattctgggtgc-----caggatagctctgt-----tcctaa-ctatcccagtactctttgaacagaa----cttataaatatttcatgcctgaat---ttctacacttgcccagtggagatggtaata---tttatcctgccaa i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86615471 134 - 129401213 TTTTAGTGCGGGTGC-----ACGGA----TAAGCTGTGTTCTTAA-CCATCTCCATTC-AATTGAGCAGAAGAAGAGTTAAAATGCTTTCTGGTTGGATTTCTTCTTCATGTGCCCAGTGGAGATCATCAAT---TTGATACCACCTA i mm10.chr8 I 1 I 766 s canFam3.chr16 16965458 122 - 59632846 ttccattctaaattc-----cagga----ttagc-----tctgctcctatctagctat-ccttgagcagaa----catttaaatgtttcctgcct-gag---ttctacatttctccaatggagatgatagta---tctattctatcaa i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1452806 130 - 2520184 TTTCCATCTGCTTTTGAGAACTGGC----TTTGT-----CCCTAA-CTCTGTAGGAAC-TCTTGGGAGGGA----CATTTAAATGCTCCAGCACTGAAT---TTCTACCTTTGCCCGATGGAGGTGACAATGGTCTTGGCATTGCCCG i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956757 415 + 3993831 I e micMur3.chr14 17516602 338 - 93316391 I a score=1211291.000000 s hg38.chr4_KI270789v1_alt 124836 109 + 205944 cgttgtaagcttCCTTTTTCTACACCATGATACTCAGTATGACATAGAGGTTCAAATcacttactattttcataaccataggcaaacctcttcacacttccatctgtaa s panTro5.chr4 192912252 109 + 194502333 cgttgtaagcttCCTTTTTCTAGACCATGATACTCAGTATGACATAGAGGTTCAAATcacttactgttttcataaccataggcaaacctcttcacacttccatctgtaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192795929 109 + 195804263 cgttgtaagcttCCTTTTTCTAGACCATGATACTCAGTATGACATAGAGGTTCAAATcacttactgttttcataaccataggcaaacctcttcacacttccatctgtaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833191 109 + 4876863 tgttgtaagcttCCTTTTTCTAGACCATGATACTCAgtatgacatagaggttcaaatcacttactgttttcatagccacaggcaaaccttttcacacttccgtctgtaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722819 109 + 115148730 cgttgtaagcttCCTTTTTCTAGACCGTGATACTCAGTATGACATAGTGGTTCAAATcacttactgtttttataaccataggcaaacctcttcatacttccatctgtaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006276 109 + 190429646 tgttgtgagCTTCCTTTTTCTAGATCATGATACTCAGTATGACATAGTAGTTCAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949054 109 + 189454096 TGTTGTGAGCTTCCTTTTTCTAGATCATGATACTCAGTATGACATAGTAGTTCAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340752 109 - 25927173 tgttgtgagCTTCCTTTTTCTAGATCATGATACTCAGTATGACATAGTAGTTCAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370480 109 + 4669795 tgttgtgagCTTCCTTTTTCTAGATCATGATACTCAGTATGACACAGTAGTTGAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328144 109 + 135778131 TGTTGTGAGCTTCCTTTTTCTAGATCATGATACTCAGTATGACATAGTAGTTCAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782147 109 - 2847728 tgttgtgagCTTCCTTTTTCTAGATCATGATACTCAGTATGACATAGTAGTTCAAATcacttactgttttcataaccataggcaaatctcttcacacttccatctgtaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896515 107 + 2368649 --ttgtgagcttcctttTTCTAGATCATGGTACTCAGTATGACATAGTAGTTCAAATcacgcactgttttcataaccataggcaaatctcttcacacctccatctgtaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626573 106 - 190850796 TGTTGTAA--TTACTTTCTCTAGACCATGATACTCAGTGTGACATAGTGGTTCAAATCACTTTTCGTTTCTATAACCATAGGC-AAGCTCTTCACACCTCCATCTGTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111470 109 - 14256875 TGTTGTAATCTTGCTTTTTCTAGACCATGATACTCAGTGTAACATAGTGGTTCAAATcacttatcgtttttataaccataggcaaagctcttcacgcctccatctgtaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1006989 109 - 2196201 TGTTGTAATCTTACTTTTTCTAGACCACGATACTCAGTGTAACATAGTGGTTCAAATcacttaccgtttttataaccataggcaaagctcttcatacctccatccgtaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402055 109 - 5030052 TGTTGTAATCTTACTTTTCCTAGACCGTGATACTCAGTGTAACATAGTGGTTCAAATCACTTATCGTTTTTATAACCACAGGCAAAGCTCTTCACAcctctatctgtaa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240181 104 - 11315646 tgttaaaagcttgctTTTTCCATATCATGGGGATCAGTAT-ACATAATGTTTCAGATcacttactagttgtgtagtgaggagcaaacctgcttaca----tatctacat i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16965580 109 - 59632846 tattgtaaacttgttTTTCTCAAATCATGAGACTGTGTATAACACAGTAGTTCAAATcactaacgagttttgtgatggtaggcaaatctctaagcatctccatttgtaa i canFam3.chr16 C 0 I 201 s dasNov3.JH570353 1452936 102 - 2520184 TGCTGGAGGCTTGC--TCCGGGGTTCTCGAGGCTCGGCAGG---CAGTGGCTCAGATCACTTCCCAGCTGGGCAGTCAGAGGGAGCCCACTGCATAC--CCTtctgtga i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956757 415 + 3993831 I e micMur3.chr14 17516602 338 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I a score=81543.000000 s hg38.chr4_KI270789v1_alt 124945 7 + 205944 agctgcc s panTro5.chr4 192912361 7 + 194502333 agctgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796038 7 + 195804263 agctgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833300 7 + 4876863 agctgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722928 7 + 115148730 agctgcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006385 7 + 190429646 agctgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949163 7 + 189454096 agctgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340861 7 - 25927173 agctgcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370589 7 + 4669795 agctgcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328253 7 + 135778131 agctgcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782256 7 - 2847728 agctgcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896622 7 + 2368649 agctgcc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626679 7 - 190850796 AGCTACC i calJac3.chr3 C 0 I 38 s saiBol1.JH378165 13111579 7 - 14256875 agctacc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007098 7 - 2196201 agctacc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402164 7 - 5030052 agctacc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240285 7 - 11315646 aactagt i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16965890 7 - 59632846 agccacc i canFam3.chr16 I 201 I 6 s dasNov3.JH570353 1453038 6 - 2520184 -atggac i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956757 415 + 3993831 I e micMur3.chr14 17516602 338 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I a score=152712.000000 s hg38.chr4_KI270789v1_alt 124952 15 + 205944 taataatagtatctg s panTro5.chr4 192912368 15 + 194502333 taataatagtatctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796045 15 + 195804263 taataatagtatctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833307 15 + 4876863 taataatagtatctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722935 15 + 115148730 taataatagtatctg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006392 15 + 190429646 taataatagtatctg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949170 15 + 189454096 taataatagtatctg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340868 15 - 25927173 taataatagtatctg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370596 15 + 4669795 taataataatatctg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328260 15 + 135778131 taataatagtatctg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782263 15 - 2847728 taataatagtatctg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896629 15 + 2368649 taataatagtatctg i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13111586 15 - 14256875 taataatcgtacctg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007105 15 - 2196201 taataatcgtacctg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402171 15 - 5030052 taataatcgtacctg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240292 15 - 11315646 tgataatagtacatg i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16965903 15 - 59632846 gcccaatagtacttg i canFam3.chr16 I 6 C 0 s dasNov3.JH570353 1453044 11 - 2520184 --acaataggacc-- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189626686 38 - 190850796 I e proCoq1.NW_012145301v1 3956757 415 + 3993831 I e micMur3.chr14 17516602 338 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I a score=746145.000000 s hg38.chr4_KI270789v1_alt 124967 72 + 205944 tgttctagtttatcatgaggattaaacgagtgaatatttatgaagcgtgtaaaacagtatttggcacatatg------ s panTro5.chr4 192912383 72 + 194502333 tgttctagtttatcatgaggattaaacgagttaatatttatgaagcgtgtaaaacagtatttggcacatatg------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796060 72 + 195804263 tgttctagtttatcatgaggattaaacgagttaatatttatgaagcgtgtaaaacagtatttggcacatatg------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833322 72 + 4876863 tgttctagtttatcatgaggattaaacaagttaatatttatgaagcgtgtaaaacagtatttggcacatatg------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112722950 72 + 115148730 tgctctaatttatcatgaggattaaatgagttaatatttatgaggcgtgtaaaacagtatttggcacctatg------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006407 67 + 190429646 tgttctagtttatcatgaggattaaatgagttaatatttatgaagcatgtaa-----catttggcacatatg------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949185 67 + 189454096 tgttctagtttatcatgaggattaaatgagttaatatttatgaagcatgtaa-----catttggcacatatg------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340883 67 - 25927173 tgttctggtttatcatgaggattaaatgagttaatatttatgaagcatgtaa-----catttggcacatatg------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370611 67 + 4669795 tgttctagtttatcatgaggattaaatgagttaatatttatgaagcatgtaa-----catttggcacatatg------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328275 67 + 135778131 tgttctagtttatcatgaggattaaatgagttaatatttatgaagcatgtga-----catttggcatatatg------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782278 67 - 2847728 tgttctagtttatcatgaggattaaatgggttaatatttatgaagcatgtaa-----catttggcacatatg------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896644 67 + 2368649 tgttctagtttatcatgaggattaaatgagttaatatttatgaagcatgtaa-----catttggcacatatg------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626724 72 - 190850796 TGTTCTAGTCCATCACgaggattaaatgagttaatatttgcaaagcatataaaacagtatttggtgcatatg------ i calJac3.chr3 I 38 C 0 s saiBol1.JH378165 13111601 72 - 14256875 tgttctagtccgtcatgaggattaaatgagttaatatttgtgaggtgtataaaacagtatttggtgcatatg------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007120 72 - 2196201 tgttctagtccgtcatgaggattaaatgagttaatatttgcgaagcgtataaaacagtatttagtgcatatg------ i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402186 72 - 5030052 tgttctagtccgtcatgaggattaaatgagttaacatttgtgaagcatataaaacagtatttggtgcatatg------ i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240307 72 - 11315646 cctcctagtttattataagtttagaatgtgttgatatttatataacacatgggacagtgttgagcattttac------ i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16965918 71 - 59632846 ctttctagtttattatgagaatcaacc-agttagtatttataaaggatgtagaacagtatttggcatgtagc------ i canFam3.chr16 C 0 I 8 s dasNov3.JH570353 1453055 77 - 2520184 tgctttagtttgttaggtggattaagtgatttaata-ctaagcagcacgtagaacaatacctggcacatagtaagctc i dasNov3.JH570353 C 0 C 0 e proCoq1.NW_012145301v1 3956757 415 + 3993831 I e micMur3.chr14 17516602 338 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I a score=1150101.000000 s hg38.chr4_KI270789v1_alt 125039 89 + 205944 caaatgttggtta-----AATTTTATGTGCAT----AAGT---GT-GTGTGCGCACTTTG-AAAAGTATAAAAATATATTTATAATATC-AGGTCAATTAATAT s panTro5.chr4 192912455 89 + 194502333 caaatgttggtta-----AATTTTATATGCAT----AAGT---GT-GTGTGCGCACTTTG-AAAAGTATAAAAATATATTTATAATATC-AGGTCAATTAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796132 89 + 195804263 caaatgttggtta-----AATTTTATGTGCAT----AAGT---GT-GTGTGCGCACTTTG-AAAAGTATAAAAATATATTTATAATATC-AGGTCAATTAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833394 86 + 4876863 caaa---tggtta-----aATTTTATGTGCAT----AAGT---GT-GTGTGCGCACTTTG-AAAAGTATAAAAATATATTTATAATATC-AGGTCAATTAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723022 92 + 115148730 caaatgttggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAATATAGAAATGTATTTATAATATC-AGGTCAATTAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006474 92 + 190429646 caaatgtcggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAATATC-AGGTCAATTAGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949252 92 + 189454096 caaatgtcggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATTATATC-AGGTCAATTAGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24340950 92 - 25927173 caaatgtcggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAATATC-AGGTCAATTAGTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370678 92 + 4669795 caaatgtcggtta-----AATTTTATGTGTGT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAATATC-AGGTCAATTAGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328342 92 + 135778131 caaatgtcggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAATATC-AGGTCAATTAGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782345 92 - 2847728 caaatgtcggtta-----AATTTTATGTGCAT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAGTATC-AGGTCAATTAGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896711 92 + 2368649 caaatgtcagtta-----aattttATGTGCGT----AAGTGTGGT-GTGTGCACACTTTG-AAAAGTGTAAAAATACATTTATAATACC-AGGTCAATTAGTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626796 91 - 190850796 caagtgtcgctta-----aACTTTATGTGCAA----AAGTGGGGC-GTGTGCAGACTTTG-AAAAGTATAAAAATATATTCATAACATC-AGGTCAATTAGTA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111673 91 - 14256875 caagtgtcagtta-----aGTTCTATGGGCAT----AAGTGTGGT-GTGTGCAAACTTTG-AAAAGTATAAAAATATATTCATAATATC-AGGTCAATTAGTA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007192 91 - 2196201 caagtgtcagtta-----aattttATGTGCAT----AAGTGTGGT-GTACGCAAACTTTG-AAACGTATAAAAATATATTCATAATATC-GGGTCAATTAGTA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402258 91 - 5030052 caagtgtcagtta-----aatgttATGTGCAT----AAGTGTGGT-GTGTGCAAACTTTG-AAAAGTATAAAAATATATTCATAATATC-AGGTCAATTAGTA- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17516940 86 - 93316391 caagtgttggtta-----AATTTTATGTGCAT----AAGT------GTGTGCACACTTTC-AAAAGTATAAAAATGTATTTATAATATC-AGGCCGATTATTA- i micMur3.chr14 I 338 C 0 s proCoq1.NW_012145301v1 3957172 86 + 3993831 caagtgttggtta-----AATTTCATGTGCAT----AAGT------GTGTGCACACCTTC-AAAAGTATAAAAATGTATTTACAATATC-AGGCCAATTATTA- i proCoq1.NW_012145301v1 I 415 C 0 s otoGar3.GL873580 11240380 77 - 11315646 caagtgttgcata-----aattttATGTGCCC----AAGT------GTATATACACTT----------TGAAAATGTGTTTATAATATC-AGGTTGGTTATTA- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16965997 93 - 59632846 CATGTGTCTGTGAAATATAATGTTATGTGCAT----GCGG------ATGTGCACACTTTG-AAAAGTATACAAATGCATCTGTAATATTAAGGTCAATTAGTAT i canFam3.chr16 I 8 I 207 s dasNov3.JH570353 1453132 100 - 2520184 tatgtgtttattaAATAAAATTTTGTATGTATTTTCATGTGTGTTCCTGTATGCATTTTGCAAATTTCTACATTTTTATTTATAGGGTc-agaccaattcg--- i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86615605 766 - 129401213 I a score=519593.000000 s hg38.chr4_KI270789v1_alt 125128 33 + 205944 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT s panTro5.chr4 192912544 33 + 194502333 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796221 33 + 195804263 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833480 33 + 4876863 TTTTTCTCTCTAAATGTTACTCTAGTTATGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723114 33 + 115148730 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006566 33 + 190429646 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949344 33 + 189454096 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341042 33 - 25927173 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370770 33 + 4669795 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328434 33 + 135778131 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782437 33 - 2847728 TTTTTCTCTCTAAATGCTACTCTAGTTATGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896803 33 + 2368649 TTTTTCTCTCTAAATTCTACTCTAGTTATGTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626887 33 - 190850796 TTTTTCTCTCCAAATGCTATTCTATTTATGTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111764 33 - 14256875 TTTTTCTCTCCAGATGTTATTCTATTTATGTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007283 33 - 2196201 TTTTTCTCTCCAAGTGCTATTCTATTTATGTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402349 33 - 5030052 TTTTTCTCTCCAAATGCCATTCTATTTATGTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517026 33 - 93316391 GTTTTCTCTCCAAATGCTACTCTAGTTATATAT i micMur3.chr14 C 0 I 241 s proCoq1.NW_012145301v1 3957258 33 + 3993831 GTTTTCTCCCTAAATGCTACTCTAGTTATGCAT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11240457 33 - 11315646 GTTTTCTCCCCCATTGCTGCTCTAGTTATGTAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16966297 33 - 59632846 TTTTTCTCTTAAAATACTGCTCTTGTTCAGTGC i canFam3.chr16 I 207 C 0 s dasNov3.JH570353 1453232 33 - 2520184 attttttccccaaatgctactttaattaggtat i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86615605 766 - 129401213 I a score=2023179.000000 s hg38.chr4_KI270789v1_alt 125161 156 + 205944 ATGCACTTCAAGTACTTGACTTTTAGTTTTCTCATCTGAAAAATTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCTCTTAAGTACTCCATGCT--CAGTAAGAC--AGATAAATGGAGAAATCTAGCATGAAGTTAGAAATTAAGAAG s panTro5.chr4 192912577 156 + 194502333 ATGCACTTCAAGTACTTGACTTTTAGTTTTCTCATCTGAAAAATTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCTCTTAAGTACCCCATGCT--CAGTAAGAC--AGGTAAATGGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796254 156 + 195804263 ATGCACTTCAAGTACTTGACTTTTAGTTTTCTCATCTGAAAAATTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCTCTTAAGTACCCCATGCT--CAGTAAGAC--AGGTAAATGGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833513 156 + 4876863 ATGCACTTCAAGTACTTGACTTTTAGTTTTCTCATCTGAAAAATTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCTCTTAAGTACCCCATGCT--CAGTAAGAC--AGATAAATGGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723147 156 + 115148730 ATGCACTTCAAGTACTTGACTTTTAGTTTTCTCATCTGAAAAATTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCTCTTACATACCCCATGCT--CAGTAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAATAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006599 156 + 190429646 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTATATACCCCATGCT--CAATAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949377 156 + 189454096 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATTTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTATATACCCCATGCT--CAATAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341075 156 - 25927173 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTATATACCCCATGCT--CAAGAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370803 156 + 4669795 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTATATACCCCATACT--CAATAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328467 156 + 135778131 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTACATACCCCATGCT--CAATAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782470 154 - 2847728 ATGCACTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAAC--ATATTTTTGATCATTAAGTGCTCTTATATACCCCATGCT--CAATAAGAC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896836 156 + 2368649 ATGCACTTCAAGTACTTGACTCGTAGTTTTCTCATCTGAAAACCTG-----CATTATCTTTTATTTAACTTATATTTTTGATCATTAAGTGCTCTTATATACCCCATGCT--CAATAAGGC--AGATAAATAGAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189626920 150 - 190850796 ATACATTTCAAGTACTTGACTCTTAGTTTTCTCGTCTGAAAATTTTGATTAAATTATCTTTTATTTAACTTATATTTTTGATCATTAAATGCGCTTACATACCCCATGCT--CAGTAAGAC------------AGAAATCT-GCATGAAGCTAGAAATTAAGAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111797 163 - 14256875 AGACATTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAAATTGGATTAAATTGTCTTTTACTTAACTTATATTTTTGATCATTAAATGTTCTTACATACCCCATGCT--CAATAAGACAGAGATAAATATAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007316 163 - 2196201 ATACATTTCAAGTACTTGACTCTTAGTTTTCTCATCTGAAAAATTGGGTTAAATTATCCTTTACTTAACTTATATTTTTGATCATTAAATGCTCTTACATACCCCATGCT--CAATAAGACAGAGATAAATACAGAAACCTGGCATGAAGCTAGAAATTAAGAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402382 163 - 5030052 ATGCATTTTAAGTACTTGACTCTTAGTTTTCTCATCTGAAAAATTGGATTGAATTATCTTTTACTTAACTTATATTTTTGATCATTAAATGCTCTCACATACCCCATGCT--CAATAAAACAGAGATAAATATAGAAATCTAGCATGAAGCTAGAAATTAAGAAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3957291 161 + 3993831 ATGCATTCCAAACACTCAACTctcagtttcctcatctgaaaaactggattaaattatctt----tTAATTTATATTTCCAATCATTAAGTGCTCTTACATCTCCCATGCTCTCAATAAGACAGAGGTACATATAGAAATGTAGCATGAAGCTAGAAATTAAGAAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11240490 161 - 11315646 ATGCATCTCAAATACTTGACTCTGGATTTCCTCATCTGAAAAATTGGATTAAATTATCTT----TTAACTCTCATTTCCCATCATTAAATTCTCTGGCATCTCCACTGCTCCCAATAAGACAGAGGTACCTATAGAAATGTAGCATGAAGCTAGAAATGGAGGGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16966330 156 - 59632846 ATGCATTTCAAGTACCTGAGTCC--ATTTCCACACCTAAACAATTG-----GATTATCTTTTATTTAACTTGTGTTTCCAACCATTAAATGTTTTCACATCGTCCATGCT--CCACAAGATAGAGATAAATATAGAAATCTAGTCTGATGCTAGAAATTAAGAAG i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1453265 146 - 2520184 gtgcacactatgtatttaagtctcagttttctcatctgaaaaactgaactaaaggatctt----tTTGTTTATGTTTCTGATCATTAATTATTCTCGAATTTCCAATGAT--CA-------------AAATACGGAAATCAAGTATGGAGCTACAAATAAAAAAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17517059 241 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I a score=52179.000000 s hg38.chr4_KI270789v1_alt 125317 7 + 205944 GCATA----------TT s panTro5.chr4 192912733 7 + 194502333 GTATA----------TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796410 7 + 195804263 GTATA----------TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833669 7 + 4876863 GTATA----------TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723303 7 + 115148730 GTATA----------TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006755 7 + 190429646 GTATA----------TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949533 7 + 189454096 GTATA----------TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341231 7 - 25927173 GTATA----------TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370959 7 + 4669795 GTATA----------TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328623 7 + 135778131 GTATA----------TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782624 7 - 2847728 GTATA----------TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896992 7 + 2368649 GTGTA----------TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627070 7 - 190850796 GCTTA----------TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111960 7 - 14256875 GTTTA----------TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007479 7 - 2196201 CTTTA----------TT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402545 7 - 5030052 GTTTA----------TT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3957452 9 + 3993831 GTACAG--------TTT i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16966488 17 - 59632846 ATTTAGAAGAAATTTTT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1453411 7 - 2520184 GTATA----------CT i dasNov3.JH570353 C 0 I 15154 e micMur3.chr14 17517059 241 - 93316391 I e mm10.chr8 86615605 766 - 129401213 I e otoGar3.GL873580 11240651 0 - 11315646 C a score=83631.000000 s hg38.chr4_KI270789v1_alt 125324 9 + 205944 GTTTCTATA s panTro5.chr4 192912740 9 + 194502333 GTTTCTATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796417 9 + 195804263 GTTTCTATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833676 9 + 4876863 GTTTCTATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723310 9 + 115148730 GTTTCTCTA i nomLeu3.chr7b C 0 I 272 s rheMac8.chr5 189006762 9 + 190429646 GTTTCTATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949540 9 + 189454096 GTTTCTATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341238 9 - 25927173 GTTTCTATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370966 9 + 4669795 GTTTCTATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328630 9 + 135778131 GTTTCTATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782631 9 - 2847728 GTTTCTATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 896999 9 + 2368649 GTTTCTATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627077 9 - 190850796 TTATCTATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111967 9 - 14256875 TTATCTATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007486 9 - 2196201 TTATCTATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402552 9 - 5030052 TTATGTATA i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3957461 9 + 3993831 TTTCCCATA i proCoq1.NW_012145301v1 C 0 I 1 s canFam3.chr16 16966505 9 - 59632846 TCCTCCATA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17517059 241 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86615605 766 - 129401213 I e otoGar3.GL873580 11240651 0 - 11315646 C a score=509791.000000 s hg38.chr4_KI270789v1_alt 125333 49 + 205944 AAAAAGAACAA--TTTTAACGAGGAAAGACAGAAAACAAGAAAC--ATACCAT s panTro5.chr4 192912749 49 + 194502333 AAAAAGAACAA--TTTTAACTAGGAAAGACAGAAAACAAGAAAC--ATACCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796426 49 + 195804263 AAAAAGAACAA--TTTTAACTAGGAAAGACAGAAAACAAGAAAC--ATACCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833685 46 + 4876863 AAAAAG---AA--TTTTAACGAGGAAAGACAGAAAACAAGAAAC--ATACCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723591 49 + 115148730 AAAAAGGACAA--TTTTAACTAGGAAAGACAGAAAACAAGAAAC--ATACCGT i nomLeu3.chr7b I 272 C 0 s rheMac8.chr5 189006771 49 + 190429646 AAAAAGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949549 49 + 189454096 AAAAAGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341247 49 - 25927173 AAAAAGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3370975 49 + 4669795 AAAAAGAACAA--TTTCGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328639 49 + 135778131 AAAAAGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782640 49 - 2847728 AAAACGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATACCAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897008 49 + 2368649 AAAAAGAACAA--TTTTGACTAGGAAAGACAGAAAACAAGAAAC--ATGCCAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627086 49 - 190850796 AAAAAGAACAA--TTTTAACTAGGAAAGGCATAAAACGAGAAAC--AGACCGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13111976 49 - 14256875 AAAAAGAACAA--TTTTGACTAGGAAAGGCATAAAACGAGAAAC--AGACCGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007495 49 - 2196201 AAAAAAAACAA--TTTTAACTAGGAAAGACATAAAATGAGAAGC--AGACCGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402561 49 - 5030052 AAAAAGAACAA--TTTTAACTAGGAAAGGCATAAAACGAGAAAC--AGACCGT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3957471 51 + 3993831 AAAAAGAACGA--TTTTAACCAGGAAGTATAGGAGACAATCAACAGAGACTAC i proCoq1.NW_012145301v1 I 1 C 0 s canFam3.chr16 16966514 49 - 59632846 AAAAAGAGGCACTTTTTAATTAGGAAAGAGAGAAGACAATAAAG--ACTAC-- i canFam3.chr16 C 0 C 0 e micMur3.chr14 17517059 241 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86615605 766 - 129401213 I e otoGar3.GL873580 11240651 0 - 11315646 C a score=778463.000000 s hg38.chr4_KI270789v1_alt 125382 62 + 205944 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTTACTCAGTCCCAGATTTTAAGG----TGCAATTCTCAC s panTro5.chr4 192912798 62 + 194502333 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTTACTCAGTCCCAGATTTTAAGG----CGCAATTCTCAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796475 62 + 195804263 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTTACTCAGTCCCAGATTTTAAGG----CGCAATTCTCAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833731 62 + 4876863 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTTACTCAGTCCCAGATTTTAAGG----CGCAATTCTCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723640 62 + 115148730 GGAGGCCAACTGGTTTATAAGGTGG------------------TGTTACTCAGTCCCAGATTTTAAGG----TACAATTCTCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006820 66 + 190429646 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949598 66 + 189454096 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341296 66 - 25927173 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371024 66 + 4669795 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328688 66 + 135778131 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782689 66 - 2847728 TGAGGCCAACTGGTTTATAAGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897057 66 + 2368649 TGAGGCCAACTGGTTTATACGGTGT------------------TGTGACTGAGTCCCAGGTTTTAAGGTGCATGCAGTTCTCGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627135 66 - 190850796 TGAAGCCAACTGGTTTATAAGGTGT------------------GGTAACTCAGTCCCAGATTGTAAGGTGCGTGCAGTTCTCGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13112025 66 - 14256875 TGAAGCCAGCTGTTTTATAAAGTGT------------------TGCAACTCAGTCCCAGATTTTAAGGTGCGTGCAATTCTCAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007544 66 - 2196201 TGAAGCCAGCTGGTTTATAAGGTGT------------------TGTAACTCAGTCCCAGATTTTAAGGTGCGTGCAATTCTCTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402610 66 - 5030052 TGAAGCCAACTGGTTTATGAAGTGT------------------TGCAACTCAGTCCCAGATTTTAAGGTGCATGCAATTCTCAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517300 66 - 93316391 TGAAGCCAACTGGTTTATGGAGTGT------------------TGTTATTCAATCCAAGAGTTTAAAGTGCATGTAATTCTCAC i micMur3.chr14 I 241 C 0 s proCoq1.NW_012145301v1 3957522 66 + 3993831 TAAAGCCAACTGGTTTATGGAGTGT------------------TGTTATTCAATCCAAGATTTTAAAGTGCATGTAATTCTCAC i proCoq1.NW_012145301v1 C 0 C 0 s canFam3.chr16 16966563 83 - 59632846 TGAAGTCAACTGGTTTATAAACTGTTCTTTACTGTTTATAGTCTGTTGTTCAATCCAAGATTTTAAGGTGCAT-TAATTCACAT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86615605 766 - 129401213 I e otoGar3.GL873580 11240651 0 - 11315646 C a score=2523129.000000 s hg38.chr4_KI270789v1_alt 125444 197 + 205944 ATATGAATTTTCATAGAGGCCTTTGAAGAAGAGAACAAAGTCTATGAAAA-TGCAGCCAGTAAAAGATCCTCCCCTTCCTTGAACTACACCCAACCTGACTTCAGATGC--AGGTTGCCTTTACTTGGGGACGT------GTGTGGCCGAGAGGCAAGAGGGGTTTCCCTTGAGTAGAATAGAACTTAAAGAGCCAACAGCAGACT s panTro5.chr4 192912860 197 + 194502333 ATACGAATTTTCATAGAGGCCTTTGAAGAAGAGAACAAAGTCTATGAAAA-TGCAGCCAATAAAAGATCCTCCCCTTCCTTGAACTACACCCAACCTGACTTCAGATGC--AGGTTGCCTTTACTTGGGGACGT------GTGTGGCCGAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAACTTACAGAGCCAACAGCAGACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796537 197 + 195804263 ATATGAATTTTCATAGAGGCCTTTGAAGAAGAGAACAAAGTCTATGAAAA-TGCAGCCAATAAAAGATCCTCCCCTTCCTTGAACTACACCCAACCTGACTTCAGATGC--AGGTTGCCTTTACTTGGGGACGT------GTGTGGCCGAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAACTTACAGAGCCAACAGCAGACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833793 197 + 4876863 ATATGAATTTTCATAGAGGCCTTTGAAGAAGAGAACAAAGTCTATGAAAA-TGCAGCCAATAAAAGATCCTCCCCTTCCTTGAACTACACCCAACCTGACTTCAGATGC--AGGTTGCCTTTACTTGGGGATGT------GTGTGGCGGAGAGGAAAGAGGGGTTTCCCTTGAGCAGAATAAAACTTACAGAGCCAACAGCAGACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723702 197 + 115148730 ATATGAATTTTCATAGAGGCCCTTGAAGAAGAGAACAAAGTCTATGAAAA-TGCAGCCAATAAAAGATTCTCCCCTTCCTTGAACTACACTCAACCTGACTTCAGATGC--AGGTTGCCTTTACTTGGGGACGT------CTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAACTTACACAGCCAACAGCAGACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189006886 199 + 190429646 ATACGAATTTTCATAGAGGCCCTTGAAGAAAAGAAAAAAGTCTATGAAAA-TGCAGCCAATAGAAGATCCTCCCCTCCCTTGAACTACACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTTGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTACACAGCCAACAGCAGACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949664 194 + 189454096 ATACGAATTTTCATAGAGGCCCTTG-----AAGAAAAAAGTCTATGAAAA-TGCAGCCAATAGAAGATCCTCCCCTCCCTTGAACTACACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTTGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTACACAGCCAACAGCAGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341362 199 - 25927173 ATACGAATTTTCATAGAGGCCCTTGAAGAAAAGAAAAAAGTCTATGAAAA-TGCAGCCAATAGAAGATCCTCCCCTCCCTTGAACTACACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTTGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTACACAGCCAACAGCAGACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371090 199 + 4669795 ATACGAATTTTCATAGAGGCCCCTGAAGAAGAGAAAAAAGTCTATGAAAA-TGCAGCCAGTAGAAGATCCTGCCCTCCCTTGAACTCCACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTGGGGGATGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATGAAGCTTACACAGCCAAGAGCAGACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328754 199 + 135778131 ATATGAATTTTCATAGAGGCCCTTGAAGAAGAGAAAAAAGTCTATGAAAA-TGCAGCCAATAGAAGATCCTCCCCTCCCTTGAACTACAGCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTTGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTATACAGCCAACAGCAGACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782755 199 - 2847728 ATACGAATTTTCATAGAGGCCCTTGAAGAAGAGAAAAAAGTCTATGAAAA-TGCAGCCAATAGAAGGTCCTCCCCTCCCTTGAACTACACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTGGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTACACAGCCAACAGCAGACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897123 199 + 2368649 ATATGAATTTTCATAGAAGCCCTTGAAGAAGAGAAAAACATCTATGAAAA-TGCAGCCAATAGAAGATGCTCCCCTCCCTTGAACTACACCCAACCTGACTCCAGATGCAGAGGCTGCCTTTACTTGGGGACGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCCCTTGAGTAGAATAAAGCTTACACAGCCAACAGCAGACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627201 196 - 190850796 ATTTGAGTTTTCATAGGGGCCCTTGAAGAAGAGAACAAAGTTTATGAAAA-TGCAGTCAATGCATGATCTTCCCCTTTCCTTAATTACAGCCAACCTCATTCCAAATG---AGGCTGCCTTTACTTGGGGATGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCTCTTGAGCAGAATAAAGCTCCCACAGCCAACAGCAGACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13112091 197 - 14256875 ATTTGAGTTTTCATAGAGGCCCTTGAAGACGAGAACAAAGTCTATGAAAA-TGCAGTCAACACAAGATCTTCCCCTTCCTTTAACTCCACCCAACCTGATTCCAAATGC--AGGCTGCCTTTACTTGGGGATGT------GTGTGGCCAAGAGGAAAGAGGGGTTTCTGTTGAGCAGAATAAAACTTCCACAGCCAACAGCAGACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007610 196 - 2196201 ATTTGAGTTTTCATACAGGCCCTTGAAGAAGGGAACAAAGTTTATGAAAA-TGCAGTCAACACAAGATCCT-CCCTTCTTTTAACTACACCCAACCTGATTCCAAATGC--AGGCTGCCTTTACTTGGGGATGT------CTGTGGCCAAGAGGAAAGAGGGGTTTCTCTTGAGCAGAATAAAACTTCCACAGCCAACAGCAGACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402676 197 - 5030052 ATTTGAATTTTCATAGAGGCCCTTGAAAAAGAGACCAAAGTTTATGAAAA-TGCGGTCAACACAAGATCCTCCCCTTCCTTTAACTACACCCAACCTGATTCTAAATGC--AGGCTGCCTTTACTTGGGGATGT------GTGTGGCCAAGAGGAAACAGGGGTTTCTCTTGAGCAGAATAAAACTTCCACAGCCAACAGCAGACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517366 204 - 93316391 ATTCCCATCTTCATAGAGGCTCTTGAAGAAGAGGAAAGAAGCCATGAAAACTGTTGCCAATAAAAGATACTCCCCTTCCTTTAACTATACCCAGCCTGACTCCAGACAC--AAGCGGCCTTTACCTGGGGAAGTGCTAGAGTGTGGCCAAGAAGAAAGAGGAGTCTCCCTTGAACAGAACAAAACTTCCACAGCTAACAGCTGACT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3957588 204 + 3993831 ATTCCCATCTTCATAGAGGCTCTTGAAGAAGAGGAAAGAATCCATAAGAACTGTTGCCAATAAAAGATCCTCCCCTTCCTTTAACTATACCCAGCCTGACTTTTGATGC--AGGCAGCATTTGCCTGGGGAAGTGCTAGAGCGTGGCCAAGAGGAAAGAGGGGTCTCCCTTGAGCAGAACAAAACTTCCACAGCTAACAGCTGACT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11240651 167 - 11315646 ATTTGAATCTT--TAGAAATACTTGAAGAAGAGGAAAGAAATCATAAAAATGGTAGCCAATTAAAGATCCT---CTTCCTTTAACTACACCTAACC--ACTCTAGACAT--AGGTGGCC------------------------------AGAAGGAAGAATGGCCTCCCTTGAGCAGAATGAAATGTCCATAGCTACCAGTTGACT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16966646 195 - 59632846 -TTTGGGTCTTCAGAGAGACCTTTGAAGTAGAGGAAAGAATCCATGAAAAGCACAGCTAATAAAAGATCTTCCCATCCCTTTAACTATATCCATTCTGATTGTAGATAC--AGGCTACCTTT-----GGGGAGTACTACTGGGTGGCTAGGAGGAGGGAGGA-TCTACCTTGAGCAGCATATAACTGCCATAGCTACTA--AGACT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86615605 766 - 129401213 I a score=188647.000000 s hg38.chr4_KI270789v1_alt 125641 11 + 205944 CCTCAGA---TGCT s panTro5.chr4 192913057 11 + 194502333 CCTCAGA---TGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796734 11 + 195804263 CCTCAGA---TGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3833990 11 + 4876863 CCTCAGA---TGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723899 11 + 115148730 CCTCAGA---TGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007085 11 + 190429646 CCCCAGA---TGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949858 11 + 189454096 CCCCAGA---TGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341561 11 - 25927173 CCCCAGA---TGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371289 11 + 4669795 CCCCAGA---TGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328953 11 + 135778131 CCCCAGA---TGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782954 11 - 2847728 CCCCAGA---TGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897322 11 + 2368649 CCCCAGA---TGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627397 11 - 190850796 CCCCAGA---TGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13112288 11 - 14256875 CCCCAGA---TGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007806 14 - 2196201 CCCCAGATGCTGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402873 11 - 5030052 CCCCAGA---TGCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517570 11 - 93316391 CCCCAGA---TGCT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3957792 11 + 3993831 CCCCAGA---TGCT i proCoq1.NW_012145301v1 C 0 I 137 s otoGar3.GL873580 11240818 11 - 11315646 CCACAAA---TGCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86616371 11 - 129401213 CCCCAGA---TGCT i mm10.chr8 I 766 C 0 s canFam3.chr16 16966841 11 - 59632846 CCTTAGA---TGCA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=147515.000000 s hg38.chr4_KI270789v1_alt 125652 11 + 205944 AGTAACTTGCC s panTro5.chr4 192913068 11 + 194502333 AGTAACTTGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796745 11 + 195804263 AGTAACTTGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834001 11 + 4876863 AGTAACTTGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723910 11 + 115148730 AGTAACTTGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007096 11 + 190429646 AGTAACTTGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949869 11 + 189454096 AGTAACTTGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341572 11 - 25927173 AGTAACTTGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371300 11 + 4669795 AGTAACTTGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328964 11 + 135778131 AGTAACTTGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782965 11 - 2847728 AGTAACTTGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897333 11 + 2368649 AGTAGCTTGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627408 11 - 190850796 GGTAACTTGCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13112299 11 - 14256875 GGTAACTTGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007820 11 - 2196201 GGTAACTTGAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402884 11 - 5030052 GGTAACTTGCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517581 11 - 93316391 AAGAACTTGCC i micMur3.chr14 C 0 I 125 s otoGar3.GL873580 11240829 11 - 11315646 GGGGACTCACT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86616382 11 - 129401213 CATAACTGGTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16966852 11 - 59632846 GGTAACTAGCC i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1043239.000000 s hg38.chr4_KI270789v1_alt 125663 98 + 205944 ACCAGTAGCGTACACTGTGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATAGCTTGTGATCAAAGACTGGTCGCCAGTGAAGAAGACTT---------G s panTro5.chr4 192913079 98 + 194502333 ACCAGTAGCGTACACTGTGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATAGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796756 98 + 195804263 ACCAGTAGCGTACACTGTGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATAGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834012 98 + 4876863 ACCAGTAGCGTACACTGTGTCCAACATGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATAGCTTGTGATCCAAGACTGGTCTCCAGTGAAGAAGACTT---------G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112723921 98 + 115148730 ACCAGTAGTGTACACTGTGTCCAACATGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATAGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007107 96 + 190429646 ACCAGTAGTGTACAC--TGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949880 96 + 189454096 ACCAGTAGTGTACAC--TGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341583 96 - 25927173 ACCAGTAGTGTACAC--TGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTt---------g i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371311 96 + 4669795 ACCAGTAGTGTACAC--TGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTGATCAAAGGCTGGTCTCCAGTGAAGAAGACTT---------G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134328975 98 + 135778131 ACCAGTAGTGTACACTGTGTCCAACACGCAGAGGCAGGT-TTGAGTGTAATTCCCAGATGGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2782976 105 - 2847728 ACCAGTAGTGTACAC--TGTCCAACACGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTAATCAAAGACTGGTCTCCAGTGAAGAAGACTTGggatggggg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897344 98 + 2368649 ACCAATAGTGTACACTGTGTCCAACATGCAGAGGCAGGT-TTGAGTGGAATTCCCAGATGGCTTGTGATCAAAGACTGGTCTCCAGTGAAGAAGACTT---------G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189627419 97 - 190850796 ATCAGTAGCATACACTGTGCCCAAAAC-CAGAGGCAGAT-TTGAGTGGAATTTCTGGATGGCTTGTGATCAAACACTGACCTCCAGTGAAGAGGACTT---------G i calJac3.chr3 C 0 I 512 s saiBol1.JH378165 13112310 98 - 14256875 ATCAGTAGTATACACTGTGCCCAAAACACAGAGGCAGAT-TTGAGTGGAATTCCTGGAGGGCTTGTGATCAAACACCAACCTCCAGTGAAGAGGACTT---------G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007831 98 - 2196201 ATCAGTAGCATACACTATGCCCAAAACACAGAGGCAGGT-TTGAGTGGAATTCCTGGATGGCTTGTGATCAAACACTGACCTCCAGTGAAGAGGACTT---------G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402895 98 - 5030052 ATCAGTAGCATACACTATGCCCAAAAGACAGAGGCAGGT-TTGAGTGGAATTCCTGGATGGCTTGTGATCAAACACCGACCTCCAGTGAAGAGGACTT---------G i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240840 96 - 11315646 GACTTCAGCAAATGCTGTGGCCAACACACGAGGGCAGCT-TTGGGTAGAATT-CTGGATAACTTG-GGGCAAAGACAGACTTCAAGTTAATCAGGCTT---------G i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86616393 96 - 129401213 ACTGCTTGAAAACCCTGTAAGCATCTCATGGGGACGAGCACTGTGTGCACTTCTTA-ATGCTGTGGGAACAAAAGT--GTCTCAGATGGAGAAAATCT---------G i mm10.chr8 C 0 C 0 s canFam3.chr16 16966863 98 - 59632846 ACCATTAGCAAATACTATGCATAATACATGAAGATAGCA-TTGGGTAGGATTCCTGAATTGGTTGGGATCAGAGATTGACTTCAAAAGAAGCAAGCTT---------G i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e micMur3.chr14 17517592 125 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=80068.000000 s hg38.chr4_KI270789v1_alt 125761 8 + 205944 ggatggat s panTro5.chr4 192913177 8 + 194502333 ggatgggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796854 8 + 195804263 ggatgggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834110 8 + 4876863 ggatgggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724019 6 + 115148730 ggatgg-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007203 8 + 190429646 ggatgggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949976 8 + 189454096 ggatgggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341679 8 - 25927173 ggatgggt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371407 8 + 4669795 ggatgggt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329073 8 + 135778131 ggatgggt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783081 8 - 2847728 ggatgggt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897442 7 + 2368649 ggatggg- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628028 8 - 190850796 ggatggat i calJac3.chr3 I 512 C 0 s saiBol1.JH378165 13112408 8 - 14256875 ggatggat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1007929 8 - 2196201 ggatggat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3402993 8 - 5030052 ggatggac i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240936 8 - 11315646 GGATGGGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86616489 8 - 129401213 AGATTCAT i mm10.chr8 C 0 I 57 s canFam3.chr16 16966961 8 - 59632846 AGATTTAT i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e micMur3.chr14 17517592 125 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=154977.000000 s hg38.chr4_KI270789v1_alt 125769 26 + 205944 ggatggatgggtggatggatgggtgg s panTro5.chr4 192913185 26 + 194502333 ggatggatgggtggatggatgggtgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796862 26 + 195804263 ggatggatgggtggatggatgggtgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834118 26 + 4876863 ggatggatgagtggatggatgggtgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724025 16 + 115148730 ----------gtggatggatgggtgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007211 18 + 190429646 gga--------tggatgggtgggtgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187949984 18 + 189454096 gga--------tggatgggtgggtgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341687 18 - 25927173 gga--------tggatgggtgggtgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371415 26 + 4669795 ggatggatgggtggatgggtgggtgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329081 26 + 135778131 ggatggatgggtggatgggtgggtgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783089 26 - 2847728 ggatggatgggtggatgggtgggtgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897449 15 + 2368649 -----------tggatggatgggtgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628036 26 - 190850796 ggataggtgggtgggtggatggatgg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13112416 26 - 14256875 gggtgggtgggtggatggatggatgg i saiBol1.JH378165 C 0 I 585 s cebCap1.NW_016107886v1 1007937 26 - 2196201 gtatggatggatgggcgggtgggtgg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403001 26 - 5030052 ggatggatggatggatggatggatgg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11240944 6 - 11315646 -----------TGAATG--------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16966969 6 - 59632846 ----------TTATTT---------- i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e micMur3.chr14 17517592 125 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86616497 57 - 129401213 I a score=6528.000000 s hg38.chr4_KI270789v1_alt 125795 2 + 205944 at s panTro5.chr4 192913211 2 + 194502333 at i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796888 2 + 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834144 2 + 4876863 at i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724041 2 + 115148730 at i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007229 2 + 190429646 aa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950002 2 + 189454096 aa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341705 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371441 2 + 4669795 aa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329107 2 + 135778131 aa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783115 2 - 2847728 aa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897464 2 + 2368649 aa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628062 2 - 190850796 gt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113027 2 - 14256875 at i saiBol1.JH378165 I 585 C 0 s cebCap1.NW_016107886v1 1007963 2 - 2196201 at i cebCap1.NW_016107886v1 C 0 I 639 s aotNan1.NW_018492112v1 3403027 2 - 5030052 at i aotNan1.NW_018492112v1 C 0 I 453 e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e micMur3.chr14 17517592 125 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16966975 0 - 59632846 C e mm10.chr8 86616497 57 - 129401213 I e otoGar3.GL873580 11240950 0 - 11315646 C a score=86455.000000 s hg38.chr4_KI270789v1_alt 125797 12 + 205944 AAATGGATGAAT s panTro5.chr4 192913213 12 + 194502333 aaatggatgaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796890 12 + 195804263 aaatggatgaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834146 12 + 4876863 aaatggatgaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724043 12 + 115148730 aaatggatgaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007231 12 + 190429646 gaatggatgaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950004 12 + 189454096 gaatggatgaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341707 12 - 25927173 GAATGGATGAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371443 12 + 4669795 gaatgggtgaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329109 12 + 135778131 gaatgggtgaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783117 12 - 2847728 gaatgggtgaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897466 12 + 2368649 gaatggatgaat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628064 12 - 190850796 ggatggatggat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113029 12 - 14256875 gtatgaatggat i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11240950 6 - 11315646 ------ATGAAT i otoGar3.GL873580 C 0 I 4 s canFam3.chr16 16966975 2 - 59632846 ----------AT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e proCoq1.NW_012145301v1 3957803 137 + 3993831 I e micMur3.chr14 17517592 125 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86616497 57 - 129401213 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=114353.000000 s hg38.chr4_KI270789v1_alt 125809 9 + 205944 TTAACATTG s panTro5.chr4 192913225 9 + 194502333 TTAACATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796902 9 + 195804263 TTAACATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834158 9 + 4876863 TTAACATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724055 9 + 115148730 TTAACATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007243 9 + 190429646 TTAACATTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950016 9 + 189454096 TTAACATTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341719 9 - 25927173 TTAACATTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371455 9 + 4669795 TTAACATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329121 9 + 135778131 TTAACATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783129 9 - 2847728 TTAACATTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897478 9 + 2368649 TTAACATTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628076 9 - 190850796 TTAACATTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113041 9 - 14256875 TTAACATTG i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17517717 9 - 93316391 ttaatattg i micMur3.chr14 I 125 C 0 s proCoq1.NW_012145301v1 3957940 9 + 3993831 ttaatattg i proCoq1.NW_012145301v1 I 137 C 0 s otoGar3.GL873580 11240960 9 - 11315646 TTAGCATTG i otoGar3.GL873580 I 4 C 0 s canFam3.chr16 16966977 9 - 59632846 TAAATACTG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86616497 57 - 129401213 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=768806.000000 s hg38.chr4_KI270789v1_alt 125818 68 + 205944 AGGTATAATTTGCTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTAATATTAATTTTGAT s panTro5.chr4 192913234 68 + 194502333 AGGTGTAATTTGCTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTAATATTAATTTTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796911 68 + 195804263 AGGTGTAATTTGCTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTAATATTAATTTTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834167 68 + 4876863 AGGTAGAATTTACTTAACGGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTAATATTAATTTTGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724064 68 + 115148730 AGGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTAATATTAATTTTGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007252 68 + 190429646 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTGTATTAATTTTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950025 68 + 189454096 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTGTATTAATTTTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341728 68 - 25927173 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTGTATTAATTTTGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371464 68 + 4669795 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTATATTAATTTTGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329130 68 + 135778131 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTATATTAATTTTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783138 68 - 2847728 AAGTATAATTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTATATTAATTTTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897487 68 + 2368649 AGGTATAACTTACTTAACAGTAAAATGTT---------------CAGTTTAATAAGTTTAGGCCAATTTATATTAATTTTGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628085 67 - 190850796 AGGTATAATTTATTTAATAGCAAAA-GTT---------------CATTTTAGTAAGTTTAGGCCAATTAATATTAATTTTGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113050 66 - 14256875 AGGTATAATTTATTTGATAGCAAAA--TT---------------CAGTTTAGGAAGTTTAGGCCAATTAATATTAATTTTGAT i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17517726 67 - 93316391 aGGTATAATTTACTT-ACAAGTAAATGTT---------------GAATTTAATGAGTTCAGACCAATTGATACTAATTTTGAT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3957949 67 + 3993831 aGGTATAATTTACTT-ACAGTAAAATGTT---------------GAGTTTAATGAGTTCAGACCAATTAATATTAATTTTGAT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11240969 66 - 11315646 AGGTATAATTTACTT-ACAGCAAGATGTT---------------TGGTTTAATGAG-TCAGACCAATTAACGTTAAGTTCGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86616554 83 - 129401213 agatatattttactcaaatttatatttttattttatttatCAAACAGGTTAATAAATTTAGACCAATTAGCATATATTATGGt i mm10.chr8 I 57 I 932 s canFam3.chr16 16966986 64 - 59632846 AGGTATTATTTACT---CAGTAAAATGTT---------------CC-TTTAATGAGCTTAAATGAATTAATATGAATTTTGAT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=73620.000000 s hg38.chr4_KI270789v1_alt 125886 14 + 205944 TAATCTCAAATTGT s panTro5.chr4 192913302 14 + 194502333 TAATCTCAAATTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796979 14 + 195804263 TAATCTCAAATTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834235 12 + 4876863 TAATCT--AATTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724132 14 + 115148730 TAATCTCAAATTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007320 9 + 190429646 TAATCT-----TAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950093 9 + 189454096 TAATCT-----TAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341796 9 - 25927173 TAATCT-----TAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371532 9 + 4669795 TAATCT-----TGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329198 9 + 135778131 TAATCT-----TGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783206 9 - 2847728 TAATCT-----TGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897555 9 + 2368649 TAATCT-----TGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628152 14 - 190850796 TACTCTCAAATTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113116 14 - 14256875 TACTCTCAAATTGT i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17517793 14 - 93316391 GAATCTCCAATTGT i micMur3.chr14 C 0 I 76 s proCoq1.NW_012145301v1 3958016 14 + 3993831 GAATCTCAAATTGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241035 14 - 11315646 GAATCTCAAATTGC i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16967050 14 - 59632846 GAACCTCTAATTGt i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86616637 932 - 129401213 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=68719.000000 s hg38.chr4_KI270789v1_alt 125900 10 + 205944 CTTGCTATCG s panTro5.chr4 192913316 10 + 194502333 CTTGCTATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192796993 10 + 195804263 CTTGCTATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834247 10 + 4876863 CTTGCTATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724146 10 + 115148730 TTTGCTATGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007329 10 + 190429646 TTTGTTATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950102 10 + 189454096 TTTGTTATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341805 10 - 25927173 TTTGTTATAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371541 10 + 4669795 TTTGTTATAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329207 10 + 135778131 TTTGTTATGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783215 10 - 2847728 TTTGTTATAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897564 10 + 2368649 TTTGTTATAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628166 10 - 190850796 ATTGTTACAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113130 10 - 14256875 TTTGTTATAG i saiBol1.JH378165 C 0 C 0 s proCoq1.NW_012145301v1 3958030 10 + 3993831 TTTCTTATGG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241050 10 - 11315646 TTCCTTAACA i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16967064 9 - 59632846 -tttttataa i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e micMur3.chr14 17517807 76 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86616637 932 - 129401213 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=664244.000000 s hg38.chr4_KI270789v1_alt 125910 68 + 205944 AGTGTTTTTTT----AAGACAGCACCAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTGA s panTro5.chr4 192913326 69 + 194502333 AGTGTTTTTTT---TAAGACAGCACCAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797003 69 + 195804263 AGTGTTTTTTT---TAAGACAGCACCAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834257 68 + 4876863 AGTGTTTTTTT----AAGACAGCACCAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724156 72 + 115148730 AGTGTTTTTTTTTTTAAGACAGCACTAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007339 70 + 190429646 AGTGTTATTTT--TTAAGACAGCACTAACTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950112 70 + 189454096 AGTGTTATTTT--TTAAGACAGCACTAACTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341815 70 - 25927173 AGTGTTATTTT--TTAAGACAGCACTAACTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371551 70 + 4669795 AGCGTTATTTT--TTAAGACAGCACTAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329217 70 + 135778131 AGTGTTATTTT--TTAAGACAGCACTAAGTGTAAAGACAAATCTT---GAGATCGTTATGCCAAAGACAAATTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783225 70 - 2847728 AGTGTTATTTT--TTAAGACACCACTAAGTGTAAAGGAAAATCTT---GAGATCATTATGCCAAAGACAAATTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897574 70 + 2368649 AGTGTTATTTT--TTAAGACAGCACTAAGTGTAAAGGAAAATCTT---AAGATCATTATGCCAAAGACAAATTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628176 70 - 190850796 GGTGGTTTTTT--TAAAGACAGTGCTAAGTTTCAAGGAAAATCTT---GAGATCATTATGCCAAAGATGAATTTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113140 70 - 14256875 GGTGGTTTTTT--AAAAGACAGCACTAAGTTTAAAGGAAAATCTT---GAGATCATTATGCCAAAGATGAATTTA i saiBol1.JH378165 C 0 C 0 s proCoq1.NW_012145301v1 3958040 69 + 3993831 GGTA-TTTTTG--TAAAGACAGTGCTAAGTTTGAAGGAAAATCTT---GTGATCATTACACCAAAAATGAATTTG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241060 71 - 11315646 GGT--TATTTT--TAAAGACAATGCTAAGTTTGAAAGAAAATCTTGTCGTGATCATTATGCCAACAATAAATTTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86617569 67 - 129401213 AGTACTTATTA----AAGACTGAACTAAATTTGAAGGAAAGTCT----GTAATCAGTAGACTTCATATGAATTTA i mm10.chr8 I 932 C 0 s canFam3.chr16 16967073 71 - 59632846 attattttttt----aGGACAGTGCTAAGTTTGAAGGAAAATATTGCTGTGATCATTATATCAAATATGGATCTG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e micMur3.chr14 17517807 76 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=790030.000000 s hg38.chr4_KI270789v1_alt 125978 69 + 205944 CTCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTT---TGAATACTCATAAAACA-TATTTTGAT s panTro5.chr4 192913395 69 + 194502333 CTCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797072 69 + 195804263 CTCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834325 69 + 4876863 CTCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724228 69 + 115148730 CCCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007409 69 + 190429646 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950182 69 + 189454096 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341885 69 - 25927173 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATGTTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371621 69 + 4669795 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TGCTTTGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329287 69 + 135778131 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783295 69 - 2847728 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897644 69 + 2368649 CTCCGTAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTC---TGAATACTCATAAAACA-TACTTTGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628246 71 - 190850796 CTCCATAAGATTAGTGCAAATT-ATCAAGTATATTCCATCATTCTGATGAATACTCCTAAAACA-TATT-TGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113210 72 - 14256875 CTCCATAAGATTAGTCCAAATT-ATCAAGTATATTCCATCATTCTGATGAATACTCATAAAACA-TATTCTGAC i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17517883 72 - 93316391 CTCCATAAGATTAGTCCAAAAT-ATCAAGTTTGTTCTAGCATTCTGATGAATACTCATAAAGCA-TATTTTGAC i micMur3.chr14 I 76 C 0 s proCoq1.NW_012145301v1 3958109 72 + 3993831 CTTTGTAAGATTAGTCCAACAC-ACCAAGTTTGTTCTAACATTCTGATGAATACTCATAAAGCG-TATTTTGAC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241131 73 - 11315646 CTTCCTAAGATGACTCCAATATAATCAAGTGTGTTCTAACATCCTGATGAATACTCTTAAAGCA-TATTTTGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86617636 69 - 129401213 CTTCATTGAATTA-CCTACACT-TTCACCTGTGTTCTAATATTCTGATAAATA-TCGTAAC-CA-CAGTATGAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16967144 73 - 59632846 CCCCATAAAATAAGTCCAAATT-TTCAAGGGTATTCTAATATTTTGATGAATGTTAATAAAATATTATTTTGAC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3403029 453 - 5030052 I a score=194016.000000 s hg38.chr4_KI270789v1_alt 126047 16 + 205944 TTTTATTATTTTAAGT s panTro5.chr4 192913464 16 + 194502333 TTTTATTATTTTAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797141 16 + 195804263 TTTTATTATTTTAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834394 16 + 4876863 TTTTATTATTTTAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724297 16 + 115148730 TTTTATTCTTTTAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007478 16 + 190429646 TTTTATTATTTTAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950251 16 + 189454096 TTTTATTATTTTAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341954 16 - 25927173 TTTTATTATTTTAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371690 16 + 4669795 TTTTATTATTTTAAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329356 16 + 135778131 TTTTATTATTTTAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783364 16 - 2847728 TTTTATTATTTTAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897713 16 + 2368649 TTTTATTATTTTAAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628317 16 - 190850796 TTTTATTATGTTAGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113282 16 - 14256875 TTTTATTATGTTCGGT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3403482 16 - 5030052 TTTTATTATGTTAGGT i aotNan1.NW_018492112v1 I 453 C 0 s micMur3.chr14 17517955 16 - 93316391 TTTCAGTATTTTAAGT i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3958181 16 + 3993831 TTTCAATATTTTAAGT i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241204 16 - 11315646 TTTCAGTGTTTTAAGG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86617705 12 - 129401213 ---CTTTAATTTAAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16967217 16 - 59632846 TTTCAGTATTTTAAGT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1007965 639 - 2196201 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=465005.000000 s hg38.chr4_KI270789v1_alt 126063 35 + 205944 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT s panTro5.chr4 192913480 35 + 194502333 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797157 35 + 195804263 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834410 35 + 4876863 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724313 35 + 115148730 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007494 35 + 190429646 GAATATTTGCTGAT-TTCAAATAAGCAAACCCAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950267 35 + 189454096 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24341970 35 - 25927173 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371706 35 + 4669795 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329372 31 + 135778131 GAATATTTGGTGAT-TTCAAAT----AAACCCAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783380 35 - 2847728 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897729 35 + 2368649 GAATATTTGGTGAT-TTCAAATAAGCAAACCCAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628333 34 - 190850796 GAATATTTGGTGAT-TTCAAAT-TGCAAACCCAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113298 34 - 14256875 GAATATTTGGTGAT-TTCAAAT-AGCAAACCCAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008604 34 - 2196201 GAATATTTGGTGAC-CTCAAAT-AGCAAACCCAAAT i cebCap1.NW_016107886v1 I 639 C 0 s aotNan1.NW_018492112v1 3403498 34 - 5030052 GAATATTTGGTGAT-TCCAAAT-AGCAAACCCAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17517971 35 - 93316391 GAATATTTATTGAT-TTCAAATAAGGAAACTCAAAT i micMur3.chr14 C 0 I 136 s proCoq1.NW_012145301v1 3958197 35 + 3993831 GAATATTTATTGAT-TTCAAATAAGGAAACTCAAAT i proCoq1.NW_012145301v1 C 0 I 134 s otoGar3.GL873580 11241220 32 - 11315646 GAACATTTGTTGACACTGAAATAAACCAACTC---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86617717 21 - 129401213 -------TGGTGAC-TTAAAATAAGGAAA------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16967233 30 - 59632846 GGATATTTGGTGAT-TTCAAATAAAGAAAAC----- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1437690.000000 s hg38.chr4_KI270789v1_alt 126098 152 + 205944 TCAAGAACTTTCACTGTGCAGAAATTTCCAAA-GTCAAAACCAAATAGCGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCCCTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTGAAGAAA-AAATGGCCATGATTTTTT------A s panTro5.chr4 192913515 152 + 194502333 TCAAGAACTTTCACCGTGCAGAAATTTCCAAA-GTCAAAACCAAATAGCGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCCCTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTAAAGAAA-AAATGGCCATGATTTTTT------A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797192 152 + 195804263 TCAAGAACTTTCACCGTGCAGAAATTTCCAAA-GTCAAAACCAAATAGCGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCCCTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTAAAGAAA-AAATGGCCATGATTTTTT------A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834445 152 + 4876863 TCAAGAATGTTCACCATGCAGAAATTTCCAAA-GTCAAAACCAAATAGCGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCCCTGTGATGGAATATGGGGT-GACTGTGAGGA-TGCTAAAGAAA-AAATGGCCATGATTTTTT------A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724348 152 + 115148730 ACAAGAACTTTCACCATGCAGAAATTTCCAAA-GTCAAAACCAAATATAGAGTGTGATAAATTATACT----CATTAGACAGCAGTAGAGAGGCCCTCTGTAATGGAATACGGGGC-GACTGTGAGGA-TGCTAAAGAAA-AAATGGCCATGATTTTTT------A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007529 153 + 190429646 ACAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATAGGGT-GAC----AGGA-TGCTGCAGAAG-AAATTGCCATGATTTTTTTTTTT-A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950302 153 + 189454096 ACAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATAGGGT-GAC----AGGA-TGCTGCAGAAG-AAATTGCCATGATTTTTTTTTTT-A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342005 158 - 25927173 ACAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATAGGGT-GACTGTGAGGA-TGCTGCAGAAG-AAATTGCCATGATTTTTTTTTTTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371741 153 + 4669795 ACAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGATAAGTTATACT----CGTTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATAGGGT-GACTGTGAGGA-TGCTGCAAAAA-AAATTGCCATGATTTTTTT-----A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329403 152 + 135778131 ATAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGGTAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTGCAGAAA-AAATTGCGATGA-TTTTTT-----A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783415 153 - 2847728 ACAAGAACTTCCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAATAGAGAGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTGCAGAAA-AAATTGCCATGATTTTTTT-----A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897764 149 + 2368649 AGAAGAACTTTCACCGTGCAGAAATTTCCAAA-ATCAAAACCAAAT----AGTGTGATAAGTTATACT----CATTAGACAGCAATAGAGAGGCCCACTGTAATGGAATATGGGGT-GACTGTGAGGA-TGCTGCAGAAA-AAATTGCCATGATTTTTTT-----A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628367 149 - 190850796 ACAAGAACTTCCACTGTGCAGAAATTTCCAAA-GTCAAAACCAAAT----AGTGTTGTAAGTTAGACTAATTAACTGGACAGCAATAGAGA-GTCCACTGTAATGAAACAC-GGGT-GACCACGAGGA-GGCTGAAGAA--AAGCTGCCGTGATTTTTT------A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113332 152 - 14256875 GCAAGAACTTCCACTGTGCAGAAATTTCCAAA-GTCAAAACCAAATAGAGAGTGTGATAAGTTAGACTG---AACTGGACAGCAATAGAGAGGTCCACTGTAATGAAACATGGGGT-GATCACGAGGA-TGCTAAAGAA--AAATTGCTATGATTTTTT------A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008638 151 - 2196201 ACAAGAAATTCCACTGTGCAGAAATTTCCAAA-GTCAAAACCAAATAGAGAGTGTGATAAGTTAGACT----AATTGGACAGCAATATAGAGATCCACTGTAATGAAACATGGGGT-GATCACAAGGA-TGCTAAAGAA--AAATTGCCATGATTTTTA------A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403532 151 - 5030052 ACAAGAACTTCCACTATGCAGAAATTTCCAAA-GTCAAAACCAAATAGAGTGTGTGAAGAGTTAGAAT----AATTGGACAGCAATAGAGAGGTTCACTGTAATGAAACATGGGGT-GATCACGAGGA-TGTTAAAGAA--AAATTGCTGTGATTTTTT------A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11241252 137 - 11315646 --------------CTTGCAAAAATTTACAAATGCAAAAACCCAATGGAGGGTGTGATGCATTTTACT----GATTGGACAGCAGTAGAGACG-CCACTGCAGTG-AGTACTGGAT-TGGGATGAGAAGGGCTGGGGACT-GCAGAGCCCCGAACTTGC------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86617738 137 - 129401213 ----GAATT------GTATA-AAATTTACAAA-GTCAAAATGAAGCGAAAAGTTTGTTATTTTGTACC----AATTAGCAAGAAA-----AAGCCTCCAGTGACAGAAAACTGGTA-GACTATACGTG-AACGAAGGGAAGGAGGTGCCACAATGTCTT------A i mm10.chr8 C 0 C 0 s canFam3.chr16 16967263 139 - 59632846 ---------TTCACTGTGCAAATATTTACAAA-TTCAGAACCAAATGGAGAGTGTGCTAAGTTGTACT----AACTGGACAGCA-----GAAGCCTAATGTGGTGGAGTATGGGCTAGATGGTGAAGC-AGAGAGAGAAA-GATGAGAAAAGGTGTCTC------C i canFam3.chr16 C 0 C 0 e proCoq1.NW_012145301v1 3958232 134 + 3993831 I e micMur3.chr14 17518006 136 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=601809.000000 s hg38.chr4_KI270789v1_alt 126250 44 + 205944 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA s panTro5.chr4 192913667 44 + 194502333 TCTGAAGTTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797344 44 + 195804263 TCTGAAGTTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834597 44 + 4876863 TCTGAAGTTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724500 44 + 115148730 TCTAAAGATGTGCTTAATAAAGTAGGAGTAGAAAATAAAGAC-----AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007682 44 + 190429646 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950455 44 + 189454096 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342163 44 - 25927173 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371894 44 + 4669795 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329555 44 + 135778131 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783568 44 - 2847728 TCTAAAGGTGTGCTTAGTAAAGTAGGAATAGAAAATAAAGAC-----AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897913 44 + 2368649 TCTAAAGGTGTACTTAGTAAAGTAGGGATAGAAAATAAAGAC-----AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628516 49 - 190850796 TCCTAAGGCGTGCTTCATAAAGTAAGAACAGAAAATTAGGACAACTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113484 49 - 14256875 TCCAAAGATGTGCTTAGTAAAGTAAGAACAGAAAATTAAGACAACTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008789 49 - 2196201 TCCAAAGATGTGCATAGTAAACTAAGAACAGAAAATTAAGACAACTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403683 49 - 5030052 TCCGAAGATGTGCCTAGTAAAGTAAGAACAGAAAATTAAGACAACTTAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17518142 44 - 93316391 TCTACAGGTGTGCTTAGCAAAGTAGGAATAGGAAATAAAGAC-----AA i micMur3.chr14 I 136 I 228 s proCoq1.NW_012145301v1 3958366 44 + 3993831 TCTACAGGTGTGCTTAGCAAAGTAGGAATAGGAAATAAAGAC-----AA i proCoq1.NW_012145301v1 I 134 I 89 s otoGar3.GL873580 11241389 44 - 11315646 TGTGCAGGAGTGCTCGGCCAAGCAGGAATAGACAGTAAAGAC-----AG i otoGar3.GL873580 C 0 I 5 s mm10.chr8 86617875 34 - 129401213 ----------TGGTTTTCAAGGTGAGAACAGAAAATAAGGTC-----AA i mm10.chr8 C 0 C 0 s canFam3.chr16 16967402 42 - 59632846 TCTAAAGGTATGTTTAGCAAAATAGGG--AGAAAATAAAGAC-----AA i canFam3.chr16 C 0 I 606 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=381430.000000 s hg38.chr4_KI270789v1_alt 126294 40 + 205944 -----ATATGCAACTCCAGGAGTT------ATGAGAATGTATTCGGGA------CGT s panTro5.chr4 192913711 40 + 194502333 -----ATATGCAACTCCAGGAGTT------ATGAGAATGTATTCGGGA------CGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797388 40 + 195804263 -----ATATGCAACTCCAGGAGTT------ATGAGAATGTATTCGGGA------CGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834641 40 + 4876863 -----GTATGCAACTCCAGGAGTT------ATGAGAATGTATTTGGGA------CGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724544 40 + 115148730 -----ATATGCAACTCTGGGAGTT------ACGAAAATGTATTCGGGA------CGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007726 40 + 190429646 -----ATATGCAATTCCAGAAGTT------ATAAAAATGTATTCAGGA------TGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950499 40 + 189454096 -----ATATGCAATTCCAGAAGTT------ATAAAAATGTATTCAGGA------TGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342207 40 - 25927173 -----ATATGCAATTCCAGAAGTT------ATAAAAATGTATTCAGGA------TGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371938 40 + 4669795 -----ATATGCAATTCCAGAACTT------ATAAAAATGTATTCAGGA------TGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329599 40 + 135778131 -----ATATGCAATTCCAGAAGTT------ATAAAAATGTATTCAGGA------TGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783612 40 - 2847728 -----ATATGCAATTCCAGAAGTT------ATAAAAGTGTATTCAGGA------TGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897957 40 + 2368649 -----ATATGCAATTCCAGAAGTT------ATAAAAATGTATTCAGGA------TGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628565 40 - 190850796 -----TTATGCAATTCCGGAAGCT------ATAAAAATGTATTTGTGA------CAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113533 40 - 14256875 -----ATATGCAGTTCCAGAAGCT------GTAAAAATGTATTTGTGA------TAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008838 40 - 2196201 -----ATATGCAATTCCAGAAGCT------GTAAAAATGTATTTGTGA------CAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403732 40 - 5030052 -----ATATGCAATTCCAGAAGCT------GTAAAAATGTATTTGTGA------CAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11241438 46 - 11315646 -----GTATGCAGTTACAGGAGTTATAAACATAAAAATGGATTCACAA------CAT i otoGar3.GL873580 I 5 C 0 s mm10.chr8 86617909 51 - 129401213 CTACACTTCACACCTCCAGCAATT------ATAACCATGAAGGCAGAAATGCAGCAT i mm10.chr8 C 0 C 0 e proCoq1.NW_012145301v1 3958410 89 + 3993831 I e micMur3.chr14 17518186 228 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16967444 606 - 59632846 I a score=297728.000000 s hg38.chr4_KI270789v1_alt 126334 29 + 205944 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- s panTro5.chr4 192913751 29 + 194502333 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797428 29 + 195804263 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834681 29 + 4876863 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724584 29 + 115148730 ATTTTCAAAAC----AAACCCAACTGCTA-----------AAAT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007766 29 + 190429646 ATTTTGAAAAC----AAACACAACTGCTA-----------AAAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950539 29 + 189454096 ATTTTGAAAAC----AAACACAACTGCTA-----------AAAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342247 29 - 25927173 ATTTTGAAAAC----AAACACAACTGCTA-----------AAAT-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3371978 29 + 4669795 ATTTTGAAAAC----AAACACAACTGCTA-----------AAAT-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329639 29 + 135778131 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783652 29 - 2847728 ATTTTGAAAAC----AAACACAACTGCTA-----------AAAT-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 897997 29 + 2368649 ATTTTGAAAAC----AAACCCAACTGCTA-----------AAAT-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628605 33 - 190850796 ATTTTGAAAACAGAGAAACCCAGCTGCTA-----------AAAT-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113573 33 - 14256875 ATTTTGAAAACAGAGAAACCCAACTGCTA-----------AAAT-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008878 33 - 2196201 ATTTTGAAAACAGAGAAACTCAACTACTA-----------AAAT-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403772 33 - 5030052 ATTTTGAAAACAGAGAAACCCAACTGCTA-----------AAAT-- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11241484 33 - 11315646 ATTTTCAAGACAAAGAATCCCAATTGCTG-----------GCAT-- i otoGar3.GL873580 C 0 I 5 s mm10.chr8 86617960 40 - 129401213 AACCTGAAAAC----AATAACAACAACAACAAAAAACCCCAAAT-- i mm10.chr8 C 0 I 9 s canFam3.chr16 16968050 29 - 59632846 atctttaaaaa----aaaAGAAAAGA--A-----------AAATGT i canFam3.chr16 I 606 C 0 e proCoq1.NW_012145301v1 3958410 89 + 3993831 I e micMur3.chr14 17518186 228 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1755674.000000 s hg38.chr4_KI270789v1_alt 126363 139 + 205944 T-----GAGTCGACCCAG-AAAAGAATTAAGCTGAGAT-ATCTCTTAGTGATACTTTCACATCCAGAT----TTACGCTTAGA-TTCATGATGCATTACAACTAATAAAATTGTTTAAGTATGAGAAAGAGCAGACCAAGGGGCCATGAAG s panTro5.chr4 192913780 144 + 194502333 TATGTTGAGTCGACCCGG-AAAAGAATTAAGCTGAGAT-ATCTCTTAGTGATACTTTCACATCCAGAT----GTACGCTTAGA-TTCATGATGCATTACAGCTAATAAAATTATTTAAGTATGAGAAAGAGCAGACCAAGGGGCCATGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797457 144 + 195804263 TATGTTGAGTCGACCCGG-AAAAGAATTAAGCTGAGAT-ATCTCTTAGTGATACTTTCACATCCAGAT----GTACGCTTAGA-TTCATGATGCATTACAGCTAATAAAATTATTTAAGTATGAGAAAGAGCAGACCAAGGGGCCATGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834710 145 + 4876863 TATGTTGAGTCGACCCGG-AAAAGAATTAAGCTGAGAT-ATCTCTTAGTTATACTTTAACATCCAGAT----TTACGCTTAGATTTCATGATGCATTACAACTAATAAAATTATTTAAGTATGAGAAAGAGCAGACCAAGGGGCCATGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724613 144 + 115148730 TATGTTGAGTCGACCTGG-AAAAGAATTAAGCTGAAAT-ATCTCTTAGTGATACTTTCATATCCAGAT----TTATGCTTAGA-TTCATAATGCATTACAACTAATAAAATTATTTAAGTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007795 139 + 190429646 TATGTTGAGTCAACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTACGCTTAGA-TTCATGATGCATTACAACTAATAAAATT-----ATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950568 144 + 189454096 TATGTTGAGTCAACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTACGCTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342276 144 - 25927173 TATGTTGAGTCAACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTACGCTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372007 144 + 4669795 TATGTTGAGTCGACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTACGCTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329668 144 + 135778131 TATGTTGAGTCGACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTATGCTTAGA-TTCATGATGCATTACAACTAATAGAAGTATTTAATTATGAGAAAAAGCAGACCAAGGAGCCATTAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783681 144 - 2847728 TATGTTGAGTCGACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTATGCTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898026 144 + 2368649 TATGTTGAGTCGACCTGG-AAAAGAATGAAGCTGAGAT-ACCTCTTAGTGATACTTTCACATCCAGAA----TTACGCTTAGA-TTCATGATCCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGACCAAGGGGCCATTAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628638 144 - 190850796 TATGTCGGGTCAACCTGG-AAAAGAATCAAGCCGAAAT-AGCTCTTAGTGATACTTTCATATCCGGAT----TTACCCTTAGA-TTCACGATGCCTTACAACTAATAAAATTACTTAATTATGAGAAAGAGCAGGGTAAGGGACCATTAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113606 144 - 14256875 TATGTTGGGTCAACCTGG-AAAATAATTAAGCTGAAAT-ATCTCTTAGTGATACTTTTATATCCAGAT----TTACACTTAGA-TTCATGATGCATTGtaaataataaaattatttaattaaGAGAAAGAGCAGACCAAGGGACCATTAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1008911 144 - 2196201 TATGTTGGGTCAACCTGG-AAAAGAATAAAGCTGAAAT-ATCTCTTAGTGGTACTTTTATATCCAGAT----TTATGCTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGGCCAAGGGACCATTAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3403805 144 - 5030052 TATGTTGGGTCAACTTGG-AAAAGAATTAAGCTTAAAT-ATCTCTTAGTGATACTTTTATATCCAGAT----TTACACTTAGA-TTCATGATGCATTACAACTAATAAAATTATTTAATTATGAGAAAGAGCAGGCCAAGGGACCACAAAG i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3958499 138 + 3993831 -----TGAGTTGACCTGG-AAAAAAATTAAGCTGAAAT-ATCATTAAGTGATATTTTCATACCCAGAT----TTGCTCTAGGG-TCC-TGATGCATTTTAACTAATCAGCTTATTTAACTATGAAAAAAAGCAGACCAAGAGACCATCAAA i proCoq1.NW_012145301v1 I 89 C 0 s otoGar3.GL873580 11241522 120 - 11315646 -----TGAGTTGACCTGG-AAAAGAATTAAACCAAAAT-ATCTTTAATTGGCATTTTCATATCCAGAT----TTGCTCTCAAG-TC------------------ATCAACTTATTTAACTATGGAAAAAAGCAGACTAAGGGACTATCAA- i otoGar3.GL873580 I 5 C 0 s mm10.chr8 86618009 130 - 129401213 GATGGAGCGCTAACTTCA-AGGAGG-------TGAGAT-ATCTTTAACTGACATCTTCAGATCCAGATTGTGTCACtattata-----------aataaaaataataaaattaGTTTACCATGCAAAAGAACAAGCCAAAGAAC-ATCAAG i mm10.chr8 I 9 I 126 s canFam3.chr16 16968079 140 - 59632846 -----TGAGTTTACCTAGAAAAAGAATTAAACTGTTATAATCTCTAAGTAATATTCTCACATGTGGAT----TTTCTCT-ATA-GTCATGATGCATTTCAACTAATAAAATTATTTAATTCTGAGAAAGAGAAGACCATAAGACCATCAAG i canFam3.chr16 C 0 C 0 e micMur3.chr14 17518186 228 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1179747.000000 s hg38.chr4_KI270789v1_alt 126502 88 + 205944 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGAACATTCTCTTTAATAA s panTro5.chr4 192913924 88 + 194502333 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGAACATTCTCTTTAATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797601 88 + 195804263 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGAACATTCTCTTTAATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834855 88 + 4876863 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGAACATTCTCTTTAATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724757 87 + 115148730 AAAATATAATTAAATGCAGATTAAAGGGGCAGGG-TTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGAACATTCTCTTTAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189007934 82 + 190429646 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTGGA--ACTCTCTTTAATAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950712 82 + 189454096 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTGGA--ACTCTCTTTAATAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342420 82 - 25927173 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTGGA--ACTCTCTTTAATAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372151 84 + 4669795 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTGGAATACTCTCTTTAATAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329812 86 + 135778131 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGACACTTAC----ACTTCAAAGACTGGA--ACTCTCTTTAATAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783825 84 - 2847728 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTGGAATACTGTCTTTAATAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898170 88 + 2368649 AAAATATAATTAAATGCAGATTAAAGGGGCAGGGCTTCTGGTTTGGCAGAC----ACTTGAACTTCAAAGACTGGAACACTCTCTTTAATAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628782 83 - 190850796 AAAATGTAATTAAATGCAGATT-AAAGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTAGACCATTCTCTTTAATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13113750 84 - 14256875 AAAATATAATTAAATGCAGATTAAAAGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTAGAACATTCTCTTTAATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009055 83 - 2196201 AAAATATAATTAAATGCAAATT-AAAGGACAGGGCTTCTGGTTTGGCAGAC----AC----GCTTCAAAGACTAGAATATTATTTTTAATAA i cebCap1.NW_016107886v1 C 0 I 340 s aotNan1.NW_018492112v1 3403949 83 - 5030052 AAAATATAATTAAATGCAGATT-AAAGGGCAGGGCTTCTGGTTTGGCAGAC----AC----ACTTCAAAGACTAGAACATTCTCTTTAATAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17518414 88 - 93316391 AAAATATAATCAAATATAGATTAAATGGGCAGGACCTCTGGTATGACTGACACTCAA----ACTTTAAAGACTAGAAAATTCTCTTTAATAA i micMur3.chr14 I 228 C 0 s proCoq1.NW_012145301v1 3958637 88 + 3993831 AAAATATAATCAAATATAGATTAAATGGGCAGGACCTCTGGTATGACAGACACTCAA----ACTTTAAAGACTAGAAAATTCTCTTTAATAA i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241642 84 - 11315646 AAAGTGTAATCAAATATAGGCTAAATGGGCAGGATCTCTGGTTTGACAGAAACTCAA----GCTTTGAAGACTAAAAAATTC----TAATAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618265 87 - 129401213 TAAATGTAGTCAAATACATATTAAATTGACAAGG-TCCCACTTTGACAGACTTGTAA----ATTTCAAAGATGTATAATTTCTCTTTTATGA i mm10.chr8 I 126 C 0 s canFam3.chr16 16968219 80 - 59632846 AAAATATAATCAAATATAGGTTAAATGGGCAGGGCCC--------ACAGTCATTTAA----ACTTCAAAGAATGGAAAATTCCCTTTAATGA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=66293.000000 s hg38.chr4_KI270789v1_alt 126590 6 + 205944 TACCTC s panTro5.chr4 192914012 6 + 194502333 TACTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797689 6 + 195804263 TACTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834943 6 + 4876863 TACTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724844 6 + 115148730 TACTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008016 6 + 190429646 TACTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950794 6 + 189454096 TACTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342502 6 - 25927173 TACTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372235 6 + 4669795 TACTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329898 6 + 135778131 TACTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783909 6 - 2847728 TACTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898258 6 + 2368649 TACTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189628865 6 - 190850796 TTCTTC i calJac3.chr3 C 0 I 327 s saiBol1.JH378165 13113834 6 - 14256875 TTCTTC i saiBol1.JH378165 C 0 I 320 s cebCap1.NW_016107886v1 1009478 6 - 2196201 taCTTG i cebCap1.NW_016107886v1 I 340 C 0 s aotNan1.NW_018492112v1 3404032 6 - 5030052 TTCTTC i aotNan1.NW_018492112v1 C 0 I 330 s micMur3.chr14 17518502 6 - 93316391 TACCTC i micMur3.chr14 C 0 C 0 s proCoq1.NW_012145301v1 3958725 6 + 3993831 TACTTC i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241726 2 - 11315646 TA---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618352 6 - 129401213 TACCTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16968299 6 - 59632846 TATGTT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1002251.000000 s hg38.chr4_KI270789v1_alt 126596 72 + 205944 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTAGCTCAAGTGTCAATGTTCTG-- s panTro5.chr4 192914018 72 + 194502333 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTAGCTCAAGTGTCAATGTTCTG-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797695 72 + 195804263 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTAGCTCAAGTGTCAATGTTCTG-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3834949 72 + 4876863 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTAGCTCAAGTGTCAATGTTCTG-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724850 63 + 115148730 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTG---------GTCTAGCTCAAGTGTCAATGTTCTG-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008022 72 + 190429646 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTCAATGTTCTG-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950800 72 + 189454096 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTGAATGTTCTG-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342508 72 - 25927173 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTCAATGTTCTG-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372241 72 + 4669795 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTCAATGTTCTG-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329904 72 + 135778131 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTCAATGTTCTG-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783915 72 - 2847728 AGTTATCTAATAA-------AAA---TGATAATTTGGAAATCATGCTGGTCACTTCTGTCTGGCTCAAGTGTCAATGTTCTG-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898264 72 + 2368649 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATCATGCTGGTCACTTCTATCTAGCTCAAGTGTCAATGTTCTA-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629198 70 - 190850796 AGTTATCTAATAA-------AAA---GGATCATTTGGAAATTATGCTGGTGACTTCTATCTAGCTC--GTGTCAACGTTATG-- i calJac3.chr3 I 327 C 0 s saiBol1.JH378165 13114160 72 - 14256875 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATTATGCTGGCGACTTCTATCTAGCTCAAGTGTCAATGTTATG-- i saiBol1.JH378165 I 320 C 0 s cebCap1.NW_016107886v1 1009484 72 - 2196201 AGTTATCTAATAA-------AAA---TGATCATTTGGAAATTATGCTGGCGACTTCTATCTAGCTCAAGTGTCAATGTTATG-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404368 72 - 5030052 AGTTATCTAATAA-------AAA---AGATCATTTGGAAATTATGCTGGTGACGTCTCTCTAGCTCAAGTGTCAATGTTATG-- i aotNan1.NW_018492112v1 I 330 C 0 s micMur3.chr14 17518508 74 - 93316391 AGTCATCCATCAA-------GAAAA-AAACCATTTGGAAATCATGTTGGTCACTTATATCTAGTTCAGATGTCACTGTTCTG-- i micMur3.chr14 C 0 I 244 s proCoq1.NW_012145301v1 3958731 74 + 3993831 GGTCATTCATTAA-------GAAAA-AAATCATTTGGAAATCATGTTGGTCACTTCTATCTAGCTCAAATGTCACTGTTCTG-- i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241728 74 - 11315646 -GTCATTCATTAA-------GAAAAGAAATCATTTGGAAATCAAGTTGGTCACTTCTGTCTAGCTCAAATGTCACTGTTCTG-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618358 65 - 129401213 AGTCATCTAATGA-------AAA-----GTCATTGAGAAATCATGTTGGCTCCTTAT-TCTCTCT----TATAAATGGTCTG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16968305 79 - 59632846 AGCCATTTAATAAGATTTTTAAA---AAATCATTCAGAAATCCTGTTGGTAAC--ATATCTAGCTCAATAGTCAATATTCTATA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=2986683.000000 s hg38.chr4_KI270789v1_alt 126668 244 + 205944 GATATACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCGAGAAAGGTGTTAACTCTTACTCTTCTTAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAATCTTTGAAA--------TATTCATTTTATTTATACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTTTGTACATATTTGACACAGTTTGGTATCAACTGTTACTCGGAT s panTro5.chr4 192914090 244 + 194502333 GATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCGAGAAAGGTGTTAACTCTTACTCTTCTTAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAATCTTTGAAA--------TATTCATTTTATTTATACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACAGTTTGGTATCAACTGTTACTCAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192797767 244 + 195804263 GATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCGAGAAAGGTGTTAACTCTTACTCTTCTTAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAATCTTTGAAA--------TATTCATTTTATTTATACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACAGTTTGGTATCAACTGTTACTCAGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835021 244 + 4876863 GATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCTTAAAATGGACTGTGGTAATTAATTCTGATGCCT--------TGAAGCAAATAAGTAAATCTTTGAAA--------TATTCATTTTATTTATACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTTTGTACATATTTGACACAGTTTGGTATCAACTGTTACTCAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112724913 244 + 115148730 TATTTACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCTTAAAATGGGCTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTGATACAGACTTAGATGTCTACTTTTTAGGAAAATCACACTTAAATACGCCTTTCACTTTTGTACATATTCCACATGGTTTGGTATCAACTGTTACTCAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008094 244 + 190429646 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACAGTTTGGTGTCAACTATTACTCAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187950872 244 + 189454096 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACGGTTTGGTGTCAACTATTACTCAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342580 244 - 25927173 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACGGTTTGGTGTCAACTATTACTCAGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372313 244 + 4669795 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACGGTTTGGTGTGAACTATTACTCAGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134329976 244 + 135778131 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATATCCCTTTCACTTCTGTACATATTTGACATGGTTTGCTGTCAACTGTTACTCAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2783987 244 - 2847728 TATACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTGGTAATTAATTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACTTTTTAGGAAAATCACACTTAAATACCCCTTTCACTTCTGTACATATTTGACACGGTTTGGTGTCAACTATTACTCAGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898336 244 + 2368649 TATACACT---GGGTATTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACTCTTCATAAAATGGACTGTAGTAATTAGTTCTGATGCCT--------GGAAGCAAATAAGTAAGTCTTTGAAA--------TATTCATTTTATTTGTACAGACTTAGATATCTACCTTTTAGGAAAATTACACTTAAATACCCCTTTCGCTTCTGTACATATTTGACACAGTTTGGTGTTAACTATTACTCAGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629268 244 - 190850796 TACACACT---GGGGGCTT-TATTCACACCGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACT-GGACCAAAATGGACTGTGGTAATTAATTCTGATGCCT---------GAAGCAAATGAGGAAGTCTTTGAAACATTA---GGTTCATTTTATTCACACAGACTTAGATACCTGCTTTTTAGGAAAATCACACTTACCTA---CTTTTACTTTTATACATATTTGACACGGTTTGGTATCAACTGTTACTCACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114232 244 - 14256875 TACACACT---GGGTACTT-TATTCACACTGAATTGCTTT---TATACATCAAGAAAGGTGTTAACTCTTACT-TCATTAAAATGGACTGTGATAATTAATTCTGATGCTG---------GAAGCAAATGAGTAAGTCTTTGAAACATTA---CACTCATTTTATTCATACGGACTTAGATACCTACTTTTTAGGAAAATCACACTTACTTA---CTTTCACTTTTATACATATTTGACATGGTTTGGTATCAACTGTTACTCAGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009556 244 - 2196201 TACACACT---AGGTACTT-TATTCACACTGAATTGCTTT---TATACGTCAAGAAAGGTGTTAACTCTTACT-TTATTAAAATGGGCTGTGGCCATTAATTCTGATGCCT---------GAAGCAAATGAGTAAGTCTTTGAAACATTA---CATTCATGTTATTCATACAGACTTAGATACCTACTTTTTAGGAAAATCACACTTACCTA---CTTTCGCTTTTATACATATTTGACACGGTTTGGTATCAACTGTTACTCAGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404440 247 - 5030052 TACACACT---GGGTACTT-TATTCACACTGAATTGCTTT---CATACATCAAGAAAGGTGTTAACTCTTACT-TTACTAAAATGGACTGTGGTAATTAATTCTGATGCCT---------GAAGCAAATGAGTAAGTCTTTGAAATATTATTGCATTCATTTTATTCATACAGACTTAGATACCTACTTTTTAGGAAAATCACACTTACCTA---CTTTCACTTTTATACATATTTGACATGGTTTGGTATCAACTGCTACTCAGAT i aotNan1.NW_018492112v1 C 0 C 0 s proCoq1.NW_012145301v1 3958805 244 + 3993831 TACACACT----GGTGCTT-TACCCACTCTGAATCACTTCATATACACTTCAAGAAAGGTATTGACTCCTACT-TTATTAAAACAGACTATGACAATTAGCTCTAATACTT--------AG----AAATAAATAAGTCTTTGAAATGACA---CATTCATTTTATTTATTCAGATTTAGATATCTACTTTTTGAGAAAATTACATTTAAATATATCTTTCACTTTTGTATAGATTTGGTGTGG--TGGTATCAATAGTTATTCCCAG i proCoq1.NW_012145301v1 C 0 C 0 s otoGar3.GL873580 11241802 243 - 11315646 TACACACT----GGTGTTT-TATCCACAATGAATCAATTCATACACATTTCAGGAAAGGTATTAACT-CTACT-TTATTAAAATGGACTATGATGATTAACCCTGATACCT--------AG----AAATAAATAAGTCCTTGAAATAGCA---TATTCATTTTATTTATTCAGATTTAGATGTCTACTTTTTGAGAAAATTACATTTAAAGATCCCTTTCGCTTTTGTATATATTTGGTGTGA--TGCTATCAATAGTTATTCACAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618423 240 - 129401213 ----CACCAAAGGGCACTT-TATTGATAGTGAATCATGTTATTCTTACTTCAAGGAAGCCATTAACTTTTACTTTGTTAAAAGAAGCCTACAATACTTAATTCTGATGACC--------ATAAATGCATAAGTACATCTTTTAAATAACA---CACTCATTTTATTAAGTCAGACTTAGATATCCAC-TCTTAGAATAATTACATTTAAGCATGCCACTCACTTT-----GCATTTG-----GTTTGGTGGTCATTCATACTTATTT i mm10.chr8 C 0 I 4 s canFam3.chr16 16968384 223 - 59632846 TATATACT---GAGTATTTATACTGACTCTG------------CATACATCAAGAGATGTATTAACTC------TTCTTAAAATACACTGTAGTAATTACTTCTGATACCTCTATAACTAGAGAAGAATAAGTAAGTTTTTGAAA--------TATATATTCT------------TTAGGAATCTACCTTTTGGGGTGGTTATATTTAAATATACTTTGCA-TTTTATATGTATTTGGCATG--TTGATATCAATAATTATTCACAA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17518582 244 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1658839.000000 s hg38.chr4_KI270789v1_alt 126912 108 + 205944 TATATAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAATTTCCTTAAAGGAAGAAGCAACAATGGATTATTTCAAGGAGAACATTATGTAATAGTCCATGCTAATGAACT s panTro5.chr4 192914334 108 + 194502333 TATATAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAATTTCCTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAACATTATGTAATAGTCCATGCTAATGAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798011 108 + 195804263 TATATAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAATTTCCTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAACATTATGTAATAGTCCATGCTAATGAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835265 108 + 4876863 TATATAGAA--------------ATATTTTCT-TGCAATGAATTTATGCAATTTCCTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAACATTATGTAATAGTCCATGCTAATGAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725157 108 + 115148730 TATATAGAA--------------ATATTTTGT-TGCAATGAATGTATCCAATTTCCTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTATGTAATAGTCCATGCTAATGAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008338 108 + 190429646 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951116 108 + 189454096 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTACCCAGTTTCTTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342824 108 - 25927173 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372557 108 + 4669795 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATCGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330220 108 + 135778131 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784231 108 - 2847728 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATCGATTATTTCAAGAAGAATGTTATGTGATAGTCCATGTGAATGAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898580 108 + 2368649 TATATAGAA--------------ATGTTTTGT-TGCAATGAATTTATCCAGTTTCTTTAAAGGAAGAAGCAACAATGGATTATTTCAAGAAGAATGTTCTGTGACAGTCCATGTGAATGAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629512 108 - 190850796 TATACAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAGTTTCCTTAAAGGAAGAAGCAATAATGGATTATTTCAAGAAGAATGTTATGTAATAATCCGTGCTAATGAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114476 108 - 14256875 TATACAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAGTTTCCCTAAAGGAAGAAGCAATAATGGATTATTTCAAGAAGCATGTTATGTAATAGTCCATGCTAATGAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009800 107 - 2196201 TATACAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAGTTTCCTTAAAGGAAGAAGCAATAATGGATTATTTCAAGAAGAATGTTATGTAATAGTCCATGCTAATGAAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404687 108 - 5030052 TATACAGAA--------------ATATTTTGT-TGCAATGAATTTATCCAGTTTCCTTAAAGGAAGAAGCAATAATGGATTATTTCAAGAAGAATGTTATGTAATAGTCCATGCTAATGAACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17518826 108 - 93316391 TATATAAAA--------------GTATTTTAT-TGCAATGAATTTATCCAACTTCCTCAAAGGAAGAAGCAATAATGGATTATTTCAAGAAGAATGTTATCTAATATTCCCTACTAATGAACT i micMur3.chr14 I 244 I 1 s proCoq1.NW_012145301v1 3959049 108 + 3993831 CATATAAAA--------------GTATTTTAT-TGCAATGCATTTATCCAATTTCCTCAAAGGAAGAAGCAATGATGGATTATTTCAAGAAGAATGTTATCTAATATTCCATACTAATGAACT i proCoq1.NW_012145301v1 C 0 N 0 s otoGar3.GL873580 11242045 123 - 11315646 TATATAAAATGGAATTATCCAATTCATTTTATCTTCAATGAATTTATTCAGTTCCCTCAAAGGAAGAGAGAATAATGGATTATTTCAAGAAGAATGTTATCTAATATCCCATGTTAATGAATT i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86618667 108 - 129401213 CATGTAGCA--------------TTATTTTAT-GACTATGGATTTATCCAGTTTCTTTCAAGGATGGAACAATAATAGATAATGACATGAATAACATTACGGAATATTCTATGCACAGGACCT i mm10.chr8 I 4 I 3 s canFam3.chr16 16968607 108 - 59632846 CATACAGAA--------------ATATTTTGT-TCAAATGAATTTATCCAGTTTCTTTCAAAGAAGAAATAGTCATGGAATACTTCAAGAAGAATGTTAACTAATATTCTATGTTCATTAACT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=768762.000000 s hg38.chr4_KI270789v1_alt 127020 76 + 205944 GTTAAAA------AAATATTATTGACACAGGCATGTTAATAGCAGTGTGGGT----TTTGGTAATCAGCT-AACATAATTAGTCCAG s panTro5.chr4 192914442 76 + 194502333 GTTAAAA------AAATATCATTGACACAGGCATGTTAATAGCAGTGTGGGT----TTTGGTAATCAGCT-AACATAATTAGTCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798119 75 + 195804263 GTT-AAA------AAATATCATTGACACAGGCATGTTAATAGCAGTGTGGGT----TTTGGTAATCAGCT-AACATAATTAGTCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835373 76 + 4876863 GTTAAAA------AAATATCATTGACACAGGCATGTTAATAGCAGTGTGGGT----TTTGGTAATCAGCT-AACATAATTAGTCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725265 76 + 115148730 TTTAAAA------AAATATCGTTAACACAGGCATGTTAATAGCAGTGTGGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008446 71 + 190429646 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951224 71 + 189454096 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24342932 71 - 25927173 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372665 71 + 4669795 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330328 71 + 135778131 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784339 71 - 2847728 TTTAAAA------AAA-----TTAGCATAGGCATGTTAATAGCAGTGTAGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898688 72 + 2368649 TCTAAAAG-----AAA-----TTAGCATAGGCATGTTAATAGCAGTGTGGAT----TTTGGTAATCAGCT-AGCATAATTAGTCCAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629620 76 - 190850796 TTTTGAA------AAATACTATGAACATAGGCATGCCAATAGCAGTGTGGAT----TTTGGTAATTAGCT-AGCGTGATTCGTCCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114584 74 - 14256875 TTTTGAA------AAATATTATGAACATAGGCATGTTAATAGCA--GTGGAT----TTTGGTAATCAGCT-AGCATGGTTAGTCCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009907 76 - 2196201 TTTTGAA------AAATATTATGAACACAGGCATGTTAATAGCAGTGTGGAT----TTTGGTAATCAGTT-AGCATGGTTAGTCCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404795 76 - 5030052 TTTTGAA------AAATATTATGAACATAGGCATGTTAATAGCAGTGCGGAT----TTTGGTAATTCGCT-AGCATGATTTGTCCAG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17518935 73 - 93316391 TTTTAAA------ATATAA--TTAATATAGCCATGTTAATAGCAGTGTGGAT----TT-GGTAATCAACT-AGCATAATTAGTCCAG i micMur3.chr14 I 1 C 0 s otoGar3.GL873580 11242169 74 - 11315646 TTTTTAG------ATATAA--TTAATATAGCCATGTTAATAGCAATGTGGAT----TTAGGTAATCAACT-AACACAATTAGTCCAG i otoGar3.GL873580 I 1 I 4 s mm10.chr8 86618778 76 - 129401213 TTTAGAA------ATA-----ATTAAAAAGCGATGCTAATTGCAATGTTGATTGGATTTACAGATTGGATAAGCATGATTAGATCAG i mm10.chr8 I 3 C 0 s canFam3.chr16 16968715 50 - 59632846 -------CACATTACATGTAATAGGCATAGTCACGTT----------TTTGT----TTTTGTTTTTAGGT-A--------------- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=61829.000000 s hg38.chr4_KI270789v1_alt 127096 5 + 205944 AATTA s panTro5.chr4 192914518 5 + 194502333 AATTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798194 5 + 195804263 AATTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835449 5 + 4876863 AATTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725341 5 + 115148730 AATTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008517 5 + 190429646 AATTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951295 5 + 189454096 AATTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343003 5 - 25927173 AATTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372736 5 + 4669795 AATTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330399 5 + 135778131 AATTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784410 5 - 2847728 AATTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898760 5 + 2368649 AATTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629696 5 - 190850796 AATTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114658 5 - 14256875 AATTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009983 5 - 2196201 AATTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404871 5 - 5030052 AATTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17519008 5 - 93316391 AATTA i micMur3.chr14 C 0 C 0 s mm10.chr8 86618854 5 - 129401213 ATCTG i mm10.chr8 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16968765 0 - 59632846 C e otoGar3.GL873580 11242243 4 - 11315646 I a score=660798.000000 s hg38.chr4_KI270789v1_alt 127101 58 + 205944 TATGGAC-TTTTT-----AAGTAATAAAAT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT s panTro5.chr4 192914523 58 + 194502333 TATGGAC-TTTTT-----AAGTAATAAAAT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798199 58 + 195804263 TATGGAC-TTTTT-----AAGTAATAAAAT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835454 58 + 4876863 TATGGAC-TTTTT-----AAGTAATAAAAT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725346 58 + 115148730 TATGGAC-TTTTT-----AAGTAATAAAAT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008522 58 + 190429646 TATGGAC-TTGTT-----AAATTTAAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951300 58 + 189454096 TATGGAC-TTGTT-----AAATTTAAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343008 58 - 25927173 TATGGAC-TTGTT-----AAATTTTAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372741 58 + 4669795 TATGGAC-TTTTT-----AAGTTTAAAAAA-----ATCCTGGAAATTTTAATGTAATTAATTAAAAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330404 58 + 135778131 TATGGAC-TTTTT-----AAGTTAAAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784415 57 - 2847728 TATGGAC-TTTTT-----AAGTT-AAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898765 57 + 2368649 TATGGAC-TTTTT-----AAGTT-AAAAAA-----ATCCTGGAAATTTAAATGTAATTAATTAAAAGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629701 54 - 190850796 TATGGAC-ATCTT-----AAGTAATAAAGT-----TTACTGGAAGCTTAAATG----TAATTAAAAGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114663 58 - 14256875 TAAGGAC-TTTTT-----AAGTAATAAAGT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1009988 58 - 2196201 TATGGAC-TTTCT-----AAGTAATAAAGT-----TTACTGGAAACTTAAATGTAATTAATTAAAAGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404876 54 - 5030052 TATGGAC-TTCTT-----AAGTAATAAAGT-----TTACTGGAAACTTAAATG----TAATTAAAAGTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17519013 63 - 93316391 TATGGAC-TTTTTAGGTGATAAAGTAAAGT-----TTTCTGGAAACTTAAATGCAACTAATTAAAAGTT i micMur3.chr14 C 0 I 62 s otoGar3.GL873580 11242247 57 - 11315646 TATGAAC-TTTT------ACATAATAAAAT-----TTTCTGAAAATTTAAATGCAATTAATTAAAAGTT i otoGar3.GL873580 I 4 C 0 s mm10.chr8 86618859 55 - 129401213 --TGCACATTTTT-----AAGTAATAAAGT-----TTCCTTGAAAC--AAATACAGCTGTTTAAGAATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16968765 59 - 59632846 ----GAT-TTTTT-----AAGTAGTAAAATAAGGATTCCTTGAAATTTAAATGCATTTAATTGAAAGTT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=336201.000000 s hg38.chr4_KI270789v1_alt 127159 26 + 205944 TGGTTTAGTTATAAATATGATTAAAG s panTro5.chr4 192914581 26 + 194502333 TGGTTTAGTTATAAATATGATTAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798257 26 + 195804263 TGGTTTAGTTATAAATATGATTAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835512 26 + 4876863 TAGTTTAGTTATAAATATGATTAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725404 26 + 115148730 TGGTTTAGTTATAAATATGATTAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008580 26 + 190429646 TGGTTTAGTTATAAATATGATTAAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951358 26 + 189454096 TGGTTTAGTTATAAATATGATTAAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343066 26 - 25927173 TGGTTTAGTTATAAATATGATTAAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372799 26 + 4669795 TGGTTTAGTTATAAATATGATTAAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330462 26 + 135778131 TGGTTTAGTTATAAATATGATTAAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784472 26 - 2847728 TGGTTTAGTTATAAATATGATTAAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898822 26 + 2368649 TGGTTTAGTTATAAATATGATTAAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629755 26 - 190850796 TGGCTTAGTTATAAATATGATTAAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114721 26 - 14256875 TGGCTTAGTTATAAGTATGATTAAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010046 26 - 2196201 CGGCTTAGTTATAAATGTGATTAAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404930 26 - 5030052 CGGCTTAGTTATAAATATGATTAAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11242304 26 - 11315646 AGGTTAGGTTATAAATATAATTAAAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618914 26 - 129401213 CAGTTTATTTAAAAGTACAACTAAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16968824 26 - 59632846 GGTTTTAGTTAGGAATATGACTGAAG i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=7896.000000 s hg38.chr4_KI270789v1_alt 127185 3 + 205944 CAt s panTro5.chr4 192914607 3 + 194502333 CAt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798283 3 + 195804263 CAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835538 3 + 4876863 CAt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725430 3 + 115148730 CAT i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11242330 3 - 11315646 CAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86618940 3 - 129401213 CAT i mm10.chr8 C 0 I 1 s canFam3.chr16 16968850 3 - 59632846 CAT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C a score=13004.000000 s hg38.chr4_KI270789v1_alt 127188 13 + 205944 ttttctc---taattt s panTro5.chr4 192914610 13 + 194502333 ttttctc---taattt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798286 16 + 195804263 TTTTCTCAATTAAttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835541 13 + 4876863 ttttctc---taattt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725433 13 + 115148730 TTTTCTC---TAAttt i nomLeu3.chr7b C 0 C 0 s mm10.chr8 86618944 12 - 129401213 TCCTTTC---AACTT- i mm10.chr8 I 1 I 1161 s canFam3.chr16 16968853 13 - 59632846 TTTTCTT---CAATTT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C e otoGar3.GL873580 11242333 0 - 11315646 C a score=-25.000000 s hg38.chr4_KI270789v1_alt 127201 2 + 205944 -tt s panTro5.chr4 192914623 2 + 194502333 -tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798302 2 + 195804263 -tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835554 2 + 4876863 -tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725446 2 + 115148730 -tt i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 16968866 2 - 59632846 AT- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C e otoGar3.GL873580 11242333 0 - 11315646 C a score=113480.000000 s hg38.chr4_KI270789v1_alt 127203 155 + 205944 ttttttttttt------------gagacagagtctcgctctgtcgcccaggctggagtgcagtggccctatctcagctcactgcaagctccgcctcccgg-------------gttcac-gccatgctcctgcctcagcctcctgagtagctgggactacaggcgcccgccactatgcccg s panTro5.chr4 192914625 158 + 194502333 tttttttttttttt---------gagatggagtctcgctctgtcgcccaggctggagtgcagtggcgctatatcagctcactgcaagctccgcctcccgg-------------gttcac-tccatgctcctgcctccgcctcccgagtagctgggactactggcaccccccaccgcgcccg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798304 155 + 195804263 tttttttttgt------------gagatggagtctcgctctgtcgcccaggctggagtgcagtggcgctatatcagctcactgcaagctccgcctcccgg-------------gttcac-tccatgctcctgcctccgcctcccgagtagctgggactactggcaccccccaccgcgcccg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835556 157 + 4876863 ttttttttttt-tt---------gagacggagtcctgctgtgtcgcccaggctggagtgcagtggcgcgatcttggctcactgcaacctccgcttcccgg-------------gttcac-gccattcttctgcctcagcctcccgagtagctaggactacaggcgcccgccaccacgcccg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725448 181 + 115148730 ttttttttttttttttttttttagagacggagtcttgctcttttgcccaggccggactgcagtggagctacctcagctcactgcaagctccgcctcccagtggagctatctcagctcactgccattctcctgcctcagccttccgagtagctgggactacaggcacccaccactacgcccg i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16968868 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C e otoGar3.GL873580 11242333 0 - 11315646 C a score=9064.000000 s hg38.chr4_KI270789v1_alt 127358 11 + 205944 gctaa---tttttg s panTro5.chr4 192914783 11 + 194502333 gctaa---tttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798459 11 + 195804263 gctaa---tttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835713 14 + 4876863 gctaattttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725629 11 + 115148730 gctaa---tttttt i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 16968868 11 - 59632846 GCtta---tatttg i canFam3.chr16 C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C e otoGar3.GL873580 11242333 0 - 11315646 C a score=103444.000000 s hg38.chr4_KI270789v1_alt 127369 126 + 205944 gtatttttagtagagacggggtttcaccgtgttagccaagatggtctcgatcttctgacctcgtgatccgcccacctcggcctccaaaagtgctgggattacaggcgcgagctaccgcgcccagcc s panTro5.chr4 192914794 126 + 194502333 gtatttttagtagagacggggtttcacggtgttagccaagatggtctccatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcctggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798470 126 + 195804263 gtatttttagtagagacggggtttcacggtgttagccaagatggtctccatctcctgacctcgtgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagctaccgcgcctggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835727 126 + 4876863 gtatttttagtagagacggggtttcactgtgttagccaggatggtctcgatctcctgagctggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagctaccgcgcccggcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725640 117 + 115148730 gtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggat---------gagcacccgcgcctggcc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189629781 0 - 190850796 C e cebCap1.NW_016107886v1 1010072 0 - 2196201 C e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16968879 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3404956 0 - 5030052 C e saiBol1.JH378165 13114747 0 - 14256875 C e colAng1.NW_012116221v1 898848 0 + 2368649 C e manLeu1.NW_012102221v1 2784498 0 - 2847728 C e chlSab2.chr7 134330488 0 + 135778131 C e cerAty1.NW_012001672v1 3372825 0 + 4669795 C e macNem1.NW_012013133v1 24343092 0 - 25927173 C e macFas5.chr5 187951384 0 + 189454096 C e rheMac8.chr5 189008606 0 + 190429646 C e otoGar3.GL873580 11242333 0 - 11315646 C a score=23880.000000 s hg38.chr4_KI270789v1_alt 127495 2 + 205944 CA s panTro5.chr4 192914920 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798596 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835853 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725757 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008606 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951384 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343092 2 - 25927173 CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372825 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330488 2 + 135778131 CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784498 2 - 2847728 CA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898848 2 + 2368649 CA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629781 2 - 190850796 CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114747 2 - 14256875 CA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010072 2 - 2196201 CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404956 2 - 5030052 CA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16968879 2 - 59632846 ca i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I e otoGar3.GL873580 11242333 0 - 11315646 C a score=206642.000000 s hg38.chr4_KI270789v1_alt 127497 20 + 205944 TTTTTCTCTAATTTATACTT s panTro5.chr4 192914922 20 + 194502333 TTTTTCTCTAATTTATTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798598 20 + 195804263 TTTTTCTCTAATTTATACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835855 20 + 4876863 TTTTTCTCTAATTTATACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725759 20 + 115148730 TTTTTCGCTAATTTATACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008608 20 + 190429646 TTTTTCTCTAATTCATACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951386 20 + 189454096 TTTTTCTCTAATTCATACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343094 20 - 25927173 TTTTTCTCTAATTCATACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372827 20 + 4669795 TTTTTCTCTAATTCATACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330490 20 + 135778131 TTTTTCTCTAATTCATACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784500 20 - 2847728 TTTTTCTCTAATTCATACTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898850 20 + 2368649 TTTTTCTCTAATTCATACTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629783 20 - 190850796 TTATTCTATAATTTATGCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114749 20 - 14256875 TTTTTCTATAATTTGTGCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010074 20 - 2196201 TTTTTATATAATTTATGCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404958 20 - 5030052 TTTTTCTATAATTTATGCTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11242333 20 - 11315646 TCTTTTTCCAATTTGTGCTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16968881 12 - 59632846 --------ttatatatgctt i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519076 62 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I a score=1376671.000000 s hg38.chr4_KI270789v1_alt 127517 113 + 205944 AAATTTGCATTATTATTTGCAAAA-CGTACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGACATAGTAAATAACATAC-CAATATGGGACATGGGAGAT s panTro5.chr4 192914942 113 + 194502333 AAATTTGCATTATTATTTGCAAAA-CGTACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGACATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798618 113 + 195804263 AAATTTGCATTATTATTTGCAAAA-CGTACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGACATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835875 113 + 4876863 AAATTTGCATTATTATATGCAAAA-CGTACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGACATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725779 113 + 115148730 AAATGTGCATTATTATATGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGCAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008628 110 + 190429646 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951406 110 + 189454096 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343114 110 - 25927173 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372847 110 + 4669795 AAATTTGCATTATT---TGCAAAA-CGTACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATGC-CAATATGGGACATGGGAGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330510 110 + 135778131 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784520 110 - 2847728 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCATTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACGTGGGAGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898870 110 + 2368649 AAATTTGCATTATT---TGCAAAA-CATACCAAAATTTGGACATTTAAGCATCGTTTATTCTGAAAAAAGTA--TAAGGCATAGTAAATAACATAC-CAATATGGGACATGGGAGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189629803 113 - 190850796 AAATTTACATTATTATATGCAAAA-CATACCCCAAGTTGGACATTTAAGCTTCATTTATTCTGAAAAAAGTA--TAAGGCACAGTAAATAACATAC-CAATATGGGACATGGGAGAT i calJac3.chr3 C 0 I 488 s saiBol1.JH378165 13114769 113 - 14256875 AAATTTACATTATTATATGTAAAA-CATATGCAAATTTGGACATTTAAGCGTCATTTATTCTGAAAAAAGTA--TAAGGCACAGTAAATAACATAC-CAGTATGTGACATGGAAGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010094 112 - 2196201 AAATTTACATTATTATATGTAAAA-CATACCCAAATTTGGACATTTAAGCTTCATTTATTCTG-AAAAAGTA--TAAGGCACAGTAAATAACATGG-CAGTATGGGACATGGGAGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3404978 112 - 5030052 AAATTTACATTATTATATGTAAAA-CATACCCAAATTTGGACATTTAAGCTTCATTTATTCTG-AAAAAGTA--TAAGGCACAGTAAATAACATAC-CAATATGGGACATGGGAGAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17519138 117 - 93316391 AAATTTGCATTATCATATGGAAAAGCATACCAAAACTTGAATATCTAAGCTTCATTTATTCTGAAGAAAATCTGTAATGCATAATAAGTAATATACTCAATATGGGACATGGTAGAT i micMur3.chr14 I 62 C 0 s otoGar3.GL873580 11242353 108 - 11315646 AAATTTGCATTATTATATGCAAAA-CATACCCAAACCTGAACA--------TCATTTATTCTGAAGAAAATATGTGAAGCACAGAAAATAATACAATGAATATGGGACATGGTAGGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16968893 107 - 59632846 atatttgcatAATA---CACAAAA-CAT--CAAAACATGAACATCTAAATTCCAGTTATTCTAAAAAAAT----TAAGGCATTGTAAATAGCATAGGCAATATGAGGCATGGGAGAT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I a score=1163050.000000 s hg38.chr4_KI270789v1_alt 127630 101 + 205944 AAAAATTGATCACCCAGTAGATAAAGGGAAAAGCTCTTTCAG-AAA------AAAAAAGTAAATTTAATTGGCATATAATCAGAATATGTATGAGCATTTTGGAGTTC- s panTro5.chr4 192915055 100 + 194502333 AAAAATTGATCACCCAATAGATAAAGGGAAAAGCTCTTTCAG-AAA------AAAAA-GTAAATTTAATTGGCATATAATCAGAATATATATGAGCATTTTGGAGTTC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798731 98 + 195804263 -AAAATTGATCA-CCAATAGATAAAGGGAAAAGCTCTTTCAG-AAA------AAAAA-GTAAATTTAATTGGCATATAATCAGAATATATATGAGCATTTTGGAGTTC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3835988 101 + 4876863 AAAAATTGATCACCCAATAGATAAAGGGAAAAGCTCTTTCAG-AAA------AAAAAAGTAAATTTAATTGGCATATAATCAGAATATATAAGAGCATTTTGGAGTTC- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725892 100 + 115148730 AAAAATTGATCACCCAATAGATAAAGGGAAAAGCTCTTTAAG-AAA------AAAAA-GTAAATTTAATTGGCATATAACCACAATATATATGAGCATTTGGGAGTTA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008738 100 + 190429646 AAAAATTGATCACCCAATAGATAAAGAGAAAAGATCTTTAAG-AAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951516 100 + 189454096 AAAAATTGATCACCCAATAGATAAAGAGAAAAGATCTTTAAG-AAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343224 100 - 25927173 AAAAATTGATCACCCAATAGATAAAGAGAAAAGATCTTTAAG-AAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3372957 100 + 4669795 AAAAATTGATCACCCAATAGATAAAGAGAAAAGATCTTTAAG-AAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330620 100 + 135778131 AAAAATTGATCACCCAATAGATAAAGAGAAAAGATCTTTAAG-GAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784630 100 - 2847728 AAAAATTGATCACCCAATAGATAAAGAGAGAAGATCTTTAAG-AAA------AAAAA-GTAACTTTAATTGGCATATAATCAGAATATATACAAGCATTTTTGAGTTC- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 898980 101 + 2368649 AAAAATTGATCACCCAATAGATAAAGAGAAAAGCTCTTTAAGAAAA------AAAAA-GTAAATTTAATTGGCATATAATCAGAATATATATGAGCATTTTTGAGTTC- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630404 98 - 190850796 AAAAATGGATCGCCCAGCAGATAAAGGGAAAAATTCTTTAAG-AAG------AAAA--ATAGGTTTAATTGGCATATAATCAGAACACATGTGAGCA-CTTGGAGTTC- i calJac3.chr3 I 488 C 0 s saiBol1.JH378165 13114882 99 - 14256875 AAAAATTGATCACCCAACAGACAAAGGGAAAAGTTCTTTAAG-AAA------AAAA--GTAAATTTAATTGGCATATAATGAGAACACATATGAGCATTTTGGAGTTC- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010206 99 - 2196201 AAAAAGTGATCACCCAACAGATAAAGGGAAAACTTCTTTAAG-AAA------AAAA--GTAAATTTAATTGGCATATAATCAGAACACATATGAGCATTTTGGAGTTC- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405090 99 - 5030052 AAAAATTGATCACCCAACAGATAAAGGGAAAAGTTCTTTAAG-AAA------AAAA--GTAAATTTAATTGGCATATAATTAGAACACATATGAGCATTTCGGAATTC- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17519255 106 - 93316391 AAAAATTGATCACTCAACAAATAAAGGAAAAATTTCTCAATG-AAACAATTAAAAAG-GTGAATTTAATTGGTATGTAACCAGAATATATATGAACATTTTGGAGTTC- i micMur3.chr14 C 0 I 200 s otoGar3.GL873580 11242461 104 - 11315646 ACAAATTGATCACCCAACAAATAGAGG-AAAATTTCTTTAAG-AAATAA-TGAAAAG-GTGAATTTAACTGGCATATAACCAGAATACATAGGAGCATTTTGGAGTTT- i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16969000 101 - 59632846 AAAAATTTATCA----ATAAATAAAGGAAAACATTTACTAAG-AAACAAG--GAAAG-GTAAATTTGATTGGTATGTAATCAGAATATATATCAGCATTATGGAGGTTC i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I a score=576728.000000 s hg38.chr4_KI270789v1_alt 127731 52 + 205944 TTGTTTTCTTGTTAACTAAGGTA-GAATTTTACAGGTTTGTAGACCAAGGCTT s panTro5.chr4 192915155 52 + 194502333 TTGTTTTCCTATTAACTAAGGTA-GAATTTTACAGGTTTGTAGACCAAGGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798829 52 + 195804263 TTGTTTTCCTATTAACTAAGGTA-GAGTTTTACAGGTTTGTAGACCAAGGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836089 52 + 4876863 TTGTTTTCCTATTAACTGAGGTA-GAATTTTACAGGTTTGTAGACCAAGGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112725992 52 + 115148730 -TGTTTTCCTATTAACTAAGGAATAAATTTTACAGGCTTGTAGACCAAGGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008838 52 + 190429646 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951616 52 + 189454096 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343324 52 - 25927173 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373057 52 + 4669795 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330720 52 + 135778131 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784730 52 - 2847728 TTGTTTTCCTATTAACTAAGGTG-GAATTTTACTGGTTTGTAGACCAAGGCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899081 52 + 2368649 TTGTTTTCCTATTAACTAAGGTA-GAATTTTACTGGTTTGTAGACCAAGGCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630502 52 - 190850796 TTGTTTTCCTACGAACTAAAGTA-GACGTTTCCAGGTTTGTAGACGGAGGCTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13114981 52 - 14256875 TTGTTTTCCTATGAACTAAAGTA-GAATTTTACAGGTTTGTAGACCAAGGCTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010305 52 - 2196201 TTGTTTTCCTATGAACTAAAGTA-GAATATTACAGGTTTGTAGACCAAGGCTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405189 52 - 5030052 TTGTTTTCCTATGAACTAAAGTA-GAATTTTACAGGTTTGTAGACCAAGGCTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11242566 52 - 11315646 TTGTTTCCATATAACCTAACCCA-GAATTTTACAGGTTTGCAGACCAATGCTC i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16969101 49 - 59632846 TTATTTTCATATAAATTAA---A-GAATGCTGAAGGCTTGTGGCACAATACTT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I a score=538078.000000 s hg38.chr4_KI270789v1_alt 127783 63 + 205944 CATCTCCATGAATGTGGCCCCATGATTAagatggcttggggtcagacagactcagtcctgctg s panTro5.chr4 192915207 63 + 194502333 CATCTCCATGAATGTGGCCCCATGATTAAGATggcttggggtcagacagactcagtcctgctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798881 63 + 195804263 CATCTCCATGAATGTGGCCCCATGATTAAGATggcttggggtcagacagactcagtcctgctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836141 63 + 4876863 CATCTCCATGAATGTGGCCCCATGATTAAGATggcttggggtcagacagactcagtcctgctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726044 63 + 115148730 CGTCTCCATGAATGTGCCCCCAtgattaagatggattcgggtcagacagactcagtcctgcta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008890 63 + 190429646 CACCTCCATGAATGTggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951668 63 + 189454096 CACCTCCATGAATGTGGCCCTGTGATTAAGATggcttggggtcagacagacccagtcctgcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343376 63 - 25927173 CACCTCCATGAATGtggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373109 63 + 4669795 CACCTCCATGAATGtggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330772 63 + 135778131 CACCTCCATAAATGtggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784782 63 - 2847728 CACCTCCACGAATGtggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899133 63 + 2368649 CACCTCCATGAATGtggccctgtgattaagatggcttggggtcagacagacccagtcctgcta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630554 60 - 190850796 AGTCTCCATGAACGTGGCCCCGTGATTCAGATgctttggggccagacagaccctgg-ctgc-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115033 62 - 14256875 AGTCTCCATGaacgtggccccgtga-taaggtggtttggggtcagacagaccctggtctgctg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010357 46 - 2196201 AGTCTCCATGAacgtggctc-----------------ggggtcagacagaccctggcctgcag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405241 63 - 5030052 AGTCTCCATGAACGTGGCCCCGTGATTAAGATGGtttggggtcagacagaccctggcctgctc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11242618 37 - 11315646 C-CCTCCATgaatatgg----------aggctgaacttggatccg------------ctg--- i otoGar3.GL873580 C 0 I 79 e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I a score=710270.000000 s hg38.chr4_KI270789v1_alt 127846 76 + 205944 tttgttagttgtgtaacatcagacatgctcaaagcctcaacttactcattttggggaaataataataattattaag s panTro5.chr4 192915270 75 + 194502333 tttgttagttgtgtaacatcagacacgctcaaagcctcaacttactcattttggggaa-taataataattattaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192798944 75 + 195804263 tttgttagttgtgtaacatcagacacgctcaaagcctcaacttactcattttggggaa-taataataattattaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836204 75 + 4876863 tttgttagttgtgtaacatcagacatgctcaaagcctcaacttactcattttggggaa-taataataattattaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726107 75 + 115148730 tttgttagttgtgtaacattggacatgctcaaagcctcaacttactcattttggggaa-taatgataattattaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189008953 72 + 190429646 tttgttagttgtgtaacatcagacatgctcaaaacctcAACTTACTCATTTTGTGG----AATAATAATTATTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951731 72 + 189454096 tttgttagttgtgtaacatcagacatgctcaaaacctcaacttactcattttgtgg----aataataattattaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343439 72 - 25927173 tttgttagttgtgtaacatcagacatgctcaaaacctcaacttactcattttgtgg----aataataattattaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373172 75 + 4669795 tttgttagttgtgtaacatcagacatgctcaaaacctcaacttactcattttgtggaa-taataataATTATTAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330835 75 + 135778131 tttgtcagttgtgtaacatcagacatgctcaaaacctcaacttactcattttgtggaa-taataatagttattaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784845 75 - 2847728 tttgttagttgtgtaacatcagacatgctcaaaacctcaacttactcattttgtggaa-taataataATTATTAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899196 75 + 2368649 tttgttagttgtgtaacatcagacatgctcaaaacctcaacttactcattttggggaa-taataataattattaag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630614 70 - 190850796 --tgttagctgtataacatcagacatgctcaaagcctcatcttactcattttgggga----gtaataatTATTAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115095 75 - 14256875 tttgttagttgtataacatcagacatgctcaaagcctcatcttactcattttggggaa-tgataataattattaag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010403 75 - 2196201 tttgttagttgtttaacatcagacatgctcaaagcctcatcttactcattttgtggaa-taataataattattaag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405304 74 - 5030052 tttgtta-ttgtataacatcagacatgctcaaagcctcatcttactcattttggggaa-taataataattattaag i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e otoGar3.GL873580 11242655 79 - 11315646 I a score=75192.000000 s hg38.chr4_KI270789v1_alt 127922 10 + 205944 actggtgagg s panTro5.chr4 192915345 10 + 194502333 actggtgagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799019 10 + 195804263 actggtgagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836279 10 + 4876863 actggtgagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726182 10 + 115148730 actggtgagg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009025 10 + 190429646 ACTGGTGAGg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951803 10 + 189454096 actggtgagg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343511 10 - 25927173 actggtgagg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373247 10 + 4669795 ACTGGTGAGg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330910 10 + 135778131 actggtgagg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784920 10 - 2847728 ACTGGTGAGg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899271 10 + 2368649 actggtgagg i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3405378 10 - 5030052 actggtgagg i aotNan1.NW_018492112v1 C 0 I 9 e calJac3.chr3 189630684 0 - 190850796 C e cebCap1.NW_016107886v1 1010478 0 - 2196201 C e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e saiBol1.JH378165 13115170 0 - 14256875 C e otoGar3.GL873580 11242655 79 - 11315646 I a score=1402572.000000 s hg38.chr4_KI270789v1_alt 127932 296 + 205944 gcca-gctcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagatcgagaccatcctggctaacaccgtgaaaccccgtctctactacaaatac--aaaaaattagccgggcgtggtggcgggcgccggtagtcccagctactcgggaggctgaggcgggagaatggcgggaacccgggaggcggagcttgcagtga-----------gccgagatcgcgcccctgcacttcagccccgggggacagagcgagactccatctcagaaaacaaacaaaca s panTro5.chr4 192915355 287 + 194502333 gccaagctcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaagagatcgagaccatcctggctaacaccgtgaaaccccgtctctactaaaaatac--aaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtaa-----------gccgagatcgcgcccctgcactccagccccagcggacagagagagactccatctcagaaaa---------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799029 287 + 195804263 gccaagctcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaagagatcgagaccatcctggctaacaccgtgaaaccccgtctctactaaaaatac--aaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtga-----------gccgagatcgcgcccctgcactccagccccggcggacagagagagactccatctcagaaaa---------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836289 294 + 4876863 gccgagctcgatggctcacgcctgtcatcccagcactttgggaggccgaggagggcggatcacgaggtcaggagatcgagaccatcctggctaatatggtgaaaccccgtctctactaaaaatacaaaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtga-----------gccgagatcgcgcccctgcactccagccccgggggacagagcgagactccatctcaggaaa-----aaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726192 299 + 115148730 gccgagctcagtggttcatgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagatagagaccgtcttggctaacatgg-gaacccccgtctttactaaaaatac--aaaaaattagctgggcctggtggcaggtgcctgtagtccccgctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcgtgccaagatcgtgccactgcactccagccccgggggatagagcgaga--------aaaaaaaaaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009035 286 + 190429646 gccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggattatgaggtcaggagatc-agaccatcctggctaacacagtgaaaccccgtctctactaaaaatac--aaaaaactagccgggcgtggtggc-ggcgcctgcagtcccagctactggggaggctgaggcaggagaatggtctaaacccgggaggcggagcttgcagtga-----------gctgagatccggccactgcaccccag-cctgggcgacagagcaagactctgtctc-aaaaa-------aaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187951813 286 + 189454096 gccaggcatggaggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggattatgaggtcaggagatc-agaccatcctggctaacacagtgaaaccccgtctctactaaaaatac--aaaaaactagccgggcgtggtggc-ggcgcctgcagtcccagctactggggaggctgaggcaggagaatggtctaaacccgggaggcggagcttgcagtga-----------gctgagatccggccactgcaccccag-cctgggcgacagagcaagactctgtctc-aaaaa-------aaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343521 287 - 25927173 gccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggattatgaggtcaggagatc-agaccatcctggctaacacagtgaaaccccgtctctactaaaaatac--aaaaaactagccgggcgtggtggc-ggcgcctgcagtcccaactactggggaggctgaggcaggagaatggtctaaacccgggaggcggagcttgcagtga-----------gctgagatccggccactgcaccccag-cctgggcgacagagcaagactctgtctcaaaaaa-------aaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373257 285 + 4669795 gccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggcggattatgaggtcaggagatc-agaccatcctggctaacacggtgaaaccccgtctctactgaaaatac--aaaaaatcagccgggcctggtggc-ggcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccggg-ggcggagcttgcaggga-----------gccaagatggcgcccct-cactccag-cctgggggacacagcgagactccgtctcaaaaac-------aaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134330920 287 + 135778131 gccaggcatggtggctcacgcctgtaatcccagcattttgggaggctgaggcaggcggattatgaggtcaggagatcgagaccatcctggctaacccagtgaaaccccgtctctactaaaaacac--aaaaatctagccgggcgtggtggc-ggcgcctgtggtcccagctactggggaggctgaggcaggagaatggtgggaacccggggggcggagcttgcagtga-----------gctgagatggtgccact-cactccag-cctgggcgacacagcgagattccgtctcaaaaac-------aaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2784930 286 - 2847728 gccaggcatggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggattatgaggtcaggagatc-agaccatcctggctaacacggtgagaccccgtctctactaaaaatac--aaaaaactagccgggcgcggtggc-ggcgcctgtggtcccagctcctcgggaggctgaggcaggagaatggcgggaacccggggggcggagcttgcaggga-----------gccaagatggcgccgct-cactccag-cctgggcgactgagcgagactccgtctcaaaaac-------aaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899281 289 + 2368649 gccaggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagatcgagaccctcctggctaacacagtgaaaccccgtctctactaaaaatac--aaaaaattagccaggcgtggtggcgggcacctgtagtcccagctactggggaagctgaggtaggagaatggtgtgaacccgggaggcggagcttgcagtgg-----------gccaagatcgcaccactgcactccag-cctgggtgacacagcgagactccatctcaaaaac-------aaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189630684 0 - 190850796 C e cebCap1.NW_016107886v1 1010478 0 - 2196201 C e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3405388 9 - 5030052 I e saiBol1.JH378165 13115170 0 - 14256875 C e otoGar3.GL873580 11242655 79 - 11315646 I a score=15453.000000 s hg38.chr4_KI270789v1_alt 128228 13 + 205944 aacaaac-------------aaaaaa s panTro5.chr4 192915642 12 + 194502333 -acaaaa-------------acaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799316 12 + 195804263 -acaaaa-------------acaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836583 13 + 4876863 aaaaaaa-------------aaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726491 13 + 115148730 aaaaaaa-------------aaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009321 13 + 190429646 aacaaaa-------------caaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952099 13 + 189454096 aacaaaa-------------caaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343808 21 - 25927173 aacaaaaaaaaa-----ccccaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373542 18 + 4669795 aacaaaaaaata--------caaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331207 18 + 135778131 aacaaaaaaaca--------caaaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785216 9 - 2847728 aaca-----------------aaaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899570 26 + 2368649 aacaagcaaacaaaaaaacacaaaaa i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11242734 13 - 11315646 aatgatt-------------actaag i otoGar3.GL873580 I 79 C 0 e calJac3.chr3 189630684 0 - 190850796 C e cebCap1.NW_016107886v1 1010478 0 - 2196201 C e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3405388 9 - 5030052 I e saiBol1.JH378165 13115170 0 - 14256875 C a score=90636.000000 s hg38.chr4_KI270789v1_alt 128241 13 + 205944 actggtgagggtt s panTro5.chr4 192915654 13 + 194502333 actggtgagggtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799328 13 + 195804263 actggtgagggtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836596 13 + 4876863 actggtgagggtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726504 13 + 115148730 actggtgagggta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009334 10 + 190429646 aCTGGTGAGG--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952112 10 + 189454096 actggtgagg--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343829 10 - 25927173 actggtgagg--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373560 10 + 4669795 aCTGGTGAGG--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331225 10 + 135778131 actggtgagg--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785225 10 - 2847728 aCTGGTGAGG--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899596 13 + 2368649 actggtgaggata i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630684 13 - 190850796 ACTGGTGAGGGTA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115170 13 - 14256875 actggtgaggata i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010478 13 - 2196201 actggtgaggata i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11242747 13 - 11315646 actggtgaggata i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17519361 200 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3405388 9 - 5030052 I a score=55804.000000 s hg38.chr4_KI270789v1_alt 128254 6 + 205944 ataata s panTro5.chr4 192915667 6 + 194502333 ataata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799341 6 + 195804263 ataata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836609 6 + 4876863 ataata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726517 6 + 115148730 ataata i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009344 6 + 190429646 GTAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952122 6 + 189454096 gtaata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343839 6 - 25927173 gtaata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373570 6 + 4669795 GTAATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331235 6 + 135778131 gtaata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785235 6 - 2847728 GTAATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899609 6 + 2368649 ataata i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630697 6 - 190850796 AGAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115183 6 - 14256875 agaata i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010491 6 - 2196201 agaata i cebCap1.NW_016107886v1 C 0 C 0 s micMur3.chr14 17519561 6 - 93316391 ataata i micMur3.chr14 I 200 C 0 s otoGar3.GL873580 11242760 6 - 11315646 ataata i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969150 0 - 59632846 C e mm10.chr8 86618956 1161 - 129401213 I e aotNan1.NW_018492112v1 3405388 9 - 5030052 I a score=1067436.000000 s hg38.chr4_KI270789v1_alt 128260 103 + 205944 aatatatgtgaaTTAAATAAAAATGTGTTTTAAA-TGTCATCAATTGTTTTATATTTCTTAATAAATTTCTCTT-----TTGTCAATTTCATTATTCAGCAAACGCAGA s panTro5.chr4 192915673 103 + 194502333 aatatatgtgaaTTAAATAAAAATATGTTTTAAA-TGTCATCAATTGTTTTATATTTCTTAATAAATTTCTCTT-----TTGTCAATTTCATTATTCAGCAAATGCAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799347 103 + 195804263 aatatatgtgaaTTAAATAAAAATATGTTTTAAA-TGTCATCAATTGTTTTATATTTCTTAATAAATTTCTCTT-----TTGTCAATTTCATTATTCAGCAAATGCAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836615 103 + 4876863 aatatatgtgaaTTAAATAAAAATATGTTTTAAA-TGTCATCAATTGTTTTATATTTCTTAATAAATTTCTCTT-----TTGTCAATTTCATTATTCAGCAAATGCAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726523 100 + 115148730 aatatatgtgaaTTAAATAAAAATATGTTTTAAA-TG---TCAATTGTTTTGTATTTCTTAATAAATTTCTCTT-----TTGTCAATTTCATTATTCAGCAAATGCAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009350 98 + 190429646 GATATATGTGAACTAAATAAAAATATGTTTTAAA-TGTCATCACTTGTTTTGTATTTCTT----AATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952128 98 + 189454096 gatatatgtgaaCTAAATAAAAATATGTTTTAAA-TGTCATCACTTGTTTTGTATTTCTT----AATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343845 98 - 25927173 gatatatgtgaaCTAAATAAAAATATGTTTTAAA-TGTCATCACTTGTTTTGTATTTCTT----AATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373576 98 + 4669795 GATATATGTGAACTAAATAAAAATATGTTTTAAA-TGTCATCACTTGTTTTGTTTTTCTT----AATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331241 102 + 135778131 gatatatgtgaaCTAAATAAAAATATGTTTTAAA-TGTCATCACTTGTTTTGTATTTCTTAATAAATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785241 98 - 2847728 GATATATGTGAACTAAATAAAAATATGTTTTAAA-TGTTATCACTTGTTTTGTATTTCTT----AATGTATCTT-----TC-TCAATTTCATTATTCAGCAGATGCAGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899615 98 + 2368649 gatatatgtgaaCTAAATAAAAATATGTTTTAAA-TGTCATCAC-----TTGTATTTCTTAATAAATGTATCTT-----TTGTCAATTTCATTATTCAGCAAATGCAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630703 99 - 190850796 AATACATGTG-ATTAAATAAAAATATGATTTAAA-TG---TCAGTTGTTTCATATTTCTTAATAAATATCTTTG-----TTACCAATTTCATTATTCAGCAAATGCAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115189 102 - 14256875 aatacatatg-attaaataaaaatataatttaaa-tGTCATCAATTGTTTCATATTTCTTAATAAATTTCTTTG-----TTACCAATTTCATTATTCAGCAAATGCAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010497 102 - 2196201 aatacatgtg-aTTAAATAAAAATGTGATTAAAA-TGTCATCAATTGTTTCATATTTCTTAATAAATTTCTTTG-----TTACCAATTTCGTTATTCAGCCAATGCAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405397 99 - 5030052 aatatatgtg-aTTAAATGAGAATATGATTTAAA-TGTCATCAATTGTTTCACATTTCTTAATAAATTTCTTTG-----TTACCAATTTC---ATTCAGCAAATGCAGA i aotNan1.NW_018492112v1 I 9 C 0 s micMur3.chr14 17519567 104 - 93316391 agtatgtGTGAATTAAATAGAAATAAGGTTTAAACTGTCATTAATTGTTTCATATTCCTTAATAAATTTCCCTT-----TTGTCAATTTCATTATTCAGTAAATGCAGA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11242766 99 - 11315646 aatatgtgtg-----aaTAGCAACAAGGTTTAAAATGTCATCAGTTATTTCATATTCCTCAATACATTTCTCTT-----TTGTCAGGGTTGCTATTCAGTAAATGAAGA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16969150 108 - 59632846 GATATGTGTGAATTAATAGGAATTAGATGAGAAA-TGTCATAAATTGTTTCATATTCCTTAGCAAATTTTTCTTTACCATTCTCAATTTCAGTTTTCAGTAAATACAGA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86618956 1161 - 129401213 I a score=41153.000000 s hg38.chr4_KI270789v1_alt 128363 6 + 205944 AACTTA s panTro5.chr4 192915776 6 + 194502333 AACTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799450 6 + 195804263 AACTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836718 6 + 4876863 AACTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726623 6 + 115148730 AACTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009448 6 + 190429646 CACTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952226 6 + 189454096 CACTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343943 6 - 25927173 CACTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373674 4 + 4669795 CAC--A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331343 6 + 135778131 CACTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785339 6 - 2847728 CACTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899713 6 + 2368649 AACTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630802 6 - 190850796 AGCTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13115291 6 - 14256875 ACCTGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1010599 6 - 2196201 AACTGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405496 6 - 5030052 AACTGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17519671 6 - 93316391 GACTTA i micMur3.chr14 C 0 I 643 s otoGar3.GL873580 11242865 6 - 11315646 AACTTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620117 6 - 129401213 AACTTA i mm10.chr8 I 1161 C 0 s canFam3.chr16 16969258 3 - 59632846 --CTT- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=1907113.000000 s hg38.chr4_KI270789v1_alt 128369 187 + 205944 AGATTTTCTGCTGTTTGTAGTAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTGTGGTTTTTGCAAAA-CCAGAGGCCCATGCCAGGAGTTTTATTCAGCACGGCTCCTCTTTGATTCCTGTCACACCTAGACACAATGAAGGTGATTTGCAAAAAAGT s panTro5.chr4 192915782 186 + 194502333 -GAGTTTCTGCTGTTTGTAGTAATGTAGTATATCTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTGCGGTTTTTGCAAAA-CCAGAGGCCCATGCCAGGAGTTTTATTCAGCACGGCTCCTCTTTGATTCCTGTCACACCTAGACACAATGAAGGTGATTGGCAAAAAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799456 186 + 195804263 -GAGTTTCTGCTGTTTGTAGTAATGTAGTATATCTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTGCGGTTTTTGCAAAA-CCAGAGGCCCATGCCAGGAGTTTTATTCAGCACGGCTCCTCTTTGATTCCTGTCACACCTAGACACAATGAAGGTGATTGGCAAAAAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836724 186 + 4876863 -GAGTTTCTGCTGTTTGTAGTAATGTAGTATGTTTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTGTGGTTTTTGCAAAA-CCAGAGGCCCATGCCAGGAGTTTTATTCAGCACGGCTCCTCTTTGATTCCTGTCACACCTGGACACAATGAAGGTGGTTTGCAAAAAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726629 186 + 115148730 -GAGTTTCTGCTGTTTGTAATAATGTGGTATATTTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTGTGGTTTTTGCAAAA-CCAGAGGCCCATGCCAGGAGTTTTATTCAGCATGGCTCCTCTTTGATTCCTGTCACACCTAGTCACAATGAAGGTGGTTTGCAGaaaaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009454 186 + 190429646 -GACTTTCTGCTGTTTGGAATAATGTAGTGTATTTCATCATATGGCAAGTGCTAC----CA----GTGAGAAGTAGGATTATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTCATTCAGCATGACTCCTCTTTGATTCATGTCACACCTAGTCACAATGAAGGTGGTTTa-aaaaaagt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952232 186 + 189454096 -GACTTTCTGCTGTTTGGAATAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GTGAGAAGTAGGATTATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTCATTCAGCACGACTCCTCTTTGATTCATGTCACACCTAGTCACAATGAAGGTGGTTTa-aaaaaagt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24343949 186 - 25927173 -GACTTTCTGCTGTTTGGAATAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GTGAGAAGTAGGATTATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTCATTCAGCACGAATCCTCTTTGATTCATGTCACACCTAGTCACAATGAAGGTGGTTTa-aaaaaagt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373678 187 + 4669795 -GACTTTCTGCTGTTTGGAATAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GTGAGAAGTAGGATTATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTCATTCAGCACGACTCCTCTTTGATTCATGTCACACCTAGTCACAATGAAGGTGGTTTACAAaaaagt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331349 187 + 135778131 -GACTTTCTGCTGTTTGGAATAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTTATTCAGCACGACTCCTCTTTGATTCATGTCACACCTAGTCACGATGAAGGTGGTTTACAAAAAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785345 184 - 2847728 -GACTTTCTGCTGTTTGGAATAAT---GTATATTTCATCATATGGCAAGTGCTAC----CA----GTGAGAAGTAGGATGATTATTTATTACGTTTTTTGTAAAATCCAGAGGCCCGTGCCAGGAGTTTCATTCAGCACGACTCCTCTTTGATTCATGTCACACTTAGTCACAATGAAGGTGGTTTACAAAAAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899719 187 + 2368649 -GACTTTCTGCTGTTTAGAATAATGTAGTATATTTCATCATATGGCAAGTGCTAC----CA----GAGAGAAGTAGGATTATTTTTTATTATGTTTTTTGTAAAATCCAGAGGCCCATGCCAGGAGTTTTATTCAGCACGACTCCTCTTTGATTCATGTCACACCTAGTTACAGTGAAGGTGGTTTACAAAAAAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630808 186 - 190850796 AGAGTTTCTGCTGTCTGGAACAATGTAGTACATTTCATCATGTAACAGTTGCTAC----CA----GAGAGAAGTAGGATTATCATTTATTGCGG-TTTTGCAAAAACCAGAGGCCCATGCCAGGATTTGTATTCAGCACAGCTCTTCTTTGATTCATATCACGTCTAGTCGAAATGAAGGTGCTTTG-AAAAAAAG i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13115297 183 - 14256875 AGAGTTT---CTGTTTGGAACAATGTAGTACATTTCATCATGTAACAGTTGCTGC----CA----GAGAGAAGTAGGATTATCATTTATTGTGG-TTTTGCAAAAACCAGAGGCCCATGGCAGTATTTTTATTCAGCACAGCTCCTCTTTGATTCATATCACATCTAGTCGAAATGAAGGTGCTTTG-AAAAAAGT i saiBol1.JH378165 C 0 M 1699 s cebCap1.NW_016107886v1 1010605 186 - 2196201 AGAGTTTCTGCTGTTTGGAACAATGTCGTACATTTCATCATATGGCAATTGCTAC----CA----GAGAGAAGTAGGATTGTCATTTATTGTGG-TTTTGCAAAAACCAGAGGCCCATGGCAGGATTTTTATTCAGCACAGCTCCTGTTTGATTCATATCACATCTAGTGGAAATGAAGGTGCTTTG-AAAAAAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3405502 186 - 5030052 AGAGTTTCTGCTGTTTTGAACAATGTAGTACATTTCATCATATAACAGTTGCTAC----CA----GAGAGAAGTAGGATTATCATTTATTGTGG-TTTTGCAAAAACCAGAGGCCCATGGCAGGATTTTTATTCAGCACAGCTCCTCTTTGATTCATATCACATCTAGTCGAAATGAAGGTGCTTTG-AAAAAAGT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11242871 185 - 11315646 -CAGCGTCTGGAGTTGGAAGCAATTAGGTGTGTTCTGTC-TGGGGCCCTTAGCAC----CAGACTGAGAGAAGTGGGATGGTCATTTATGGCAT-CTCTGCAAAA-CCAAAGG-CCGCACCTGGAGTTT-GTTCTGCATAGTTCCTTCTTAATTCAC-CCACATCTGGTCACAGTGAAAATGGCTTACAAAAAAGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620123 176 - 129401213 AGAGATCCTGGTA-CTACAACAGTTGAGTACATTCTATAATGGGGAAGTTGCTATAAGACA----GAGAAACATTGGCTTAGCATTTATTGTATCATCTGCAAAA-CCAGAGCTCTACTC-----------TTCAGCCTGGA--CACTTGGCTTTTCCCCACTACTGGTCATAATTAAAGAAGCTTCAaaacaaa- i mm10.chr8 C 0 C 0 s canFam3.chr16 16969261 190 - 59632846 AGAGTTTGTGCTGCTGGGAATAGTGTAGTACCTTCAGTCATAGGGCAGTTGCTAC----CAGCGTGAAAAAAATGAGCTTAACATTTATTGCATCTTCTGCAAAA-CCAAATGCCCACACTGGAATTTTTATTCACTGCAGCTCCTTCCTTATTCATTACACATGTGGTCACAGTGAAGTTGATTTT-TAAAAAGT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=145465.000000 s hg38.chr4_KI270789v1_alt 128556 18 + 205944 AGAAGAAATAAAAGAAAA s panTro5.chr4 192915968 18 + 194502333 AGAAGAAATAAAAGAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799642 18 + 195804263 AGAAGAAATAAAAGAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836910 18 + 4876863 AGAAGAAATAAAAGAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726815 18 + 115148730 agaagaaacaaaagaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009640 18 + 190429646 agaagaaatgaaagaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952418 18 + 189454096 agaagaaatgaaagaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344135 18 - 25927173 agaagaaatgaaagaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373865 18 + 4669795 agaagaaatgaaagaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331536 15 + 135778131 AGAAGAAATGAAAGA--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785529 18 - 2847728 TGAAGAAATGAAAGAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899906 18 + 2368649 AGAAGAAATGAAAGAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189630995 14 - 190850796 AGAAGAAAGAAAAG---- i calJac3.chr3 I 1 C 0 s cebCap1.NW_016107886v1 1010791 18 - 2196201 AGAAGAAAGAAAACAAAA i cebCap1.NW_016107886v1 C 0 M 992 s aotNan1.NW_018492112v1 3405688 18 - 5030052 AGAAGAAAGAAAACAAAA i aotNan1.NW_018492112v1 C 0 I 336 s otoGar3.GL873580 11243056 18 - 11315646 AACAGAAACCAAATAAAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620299 18 - 129401213 caaacaaacaaaaatcaa i mm10.chr8 C 0 C 0 s canFam3.chr16 16969451 18 - 59632846 AGAAGGGAACACACAGAT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=31876.000000 s hg38.chr4_KI270789v1_alt 128574 5 + 205944 ACAAA- s panTro5.chr4 192915986 5 + 194502333 ACAAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799660 5 + 195804263 ACAAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836928 5 + 4876863 ACAAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726833 5 + 115148730 acaaa- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009658 5 + 190429646 acaaa- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952436 5 + 189454096 acaaa- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344153 5 - 25927173 acaaa- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373883 5 + 4669795 acaaa- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331551 3 + 135778131 --AAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785547 5 - 2847728 ACAAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899924 5 + 2368649 ACAAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631009 3 - 190850796 --AAA- i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11243074 4 - 11315646 -CAAA- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620317 5 - 129401213 acaaa- i mm10.chr8 C 0 I 51 s canFam3.chr16 16969469 2 - 59632846 ----AT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e aotNan1.NW_018492112v1 3405706 336 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=59286.000000 s hg38.chr4_KI270789v1_alt 128579 9 + 205944 ACAA-----AAACT s panTro5.chr4 192915991 9 + 194502333 ACAA-----AAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799665 9 + 195804263 ACAA-----AAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836933 9 + 4876863 ACAA-----AAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726838 9 + 115148730 acaa-----aaaCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009663 9 + 190429646 acaa-----aaACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952441 9 + 189454096 acaa-----aaACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344158 9 - 25927173 acaa-----aaACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373888 9 + 4669795 acaa-----aaACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331554 9 + 135778131 ACAA-----AAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785552 9 - 2847728 ACAA-----AAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899929 9 + 2368649 ACAA-----ACACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631012 9 - 190850796 GCAA-----AAACT i calJac3.chr3 C 0 I 307 s otoGar3.GL873580 11243078 14 - 11315646 CTAACCCCCAAACA i otoGar3.GL873580 C 0 I 4 s canFam3.chr16 16969471 9 - 59632846 ACAC-----ACATC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3405706 336 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=7085.000000 s hg38.chr4_KI270789v1_alt 128588 1 + 205944 C s panTro5.chr4 192916000 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799674 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836942 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726847 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009672 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952450 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344167 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373897 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331563 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785561 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 899938 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631328 1 - 190850796 c i calJac3.chr3 I 307 C 0 s otoGar3.GL873580 11243096 1 - 11315646 T i otoGar3.GL873580 I 4 C 0 s canFam3.chr16 16969480 1 - 59632846 T i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3405706 336 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=1346552.000000 s hg38.chr4_KI270789v1_alt 128589 179 + 205944 TTCTTGCCAAGATTTCTAAAGTAA---TGAAGAAATAACGTCACTTGTAAAAGGGGTTTCTAAAATTACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGTACCCCTATCAAATCAATTGGTTTAACATGTTTTCCCTtttaaagtaa-aataataatttaaataataaatacacattt----ttat s panTro5.chr4 192916001 179 + 194502333 TTCTTGCCAAGATTTCTAAAGTAA---CGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATTACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGTACCTCTATCAAATCAATTGGTTTAACATGTTTTCCCTtttaaagtaa-aataataatttaaataataaatacacattt----ttat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799675 179 + 195804263 TTCTTGCCAAGATTTCTAAAGTAA---CGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATTACCTATCTGG-AACAGAAGAAAGCAAGAGTCTGGTACCTCTATCAAATCAATTGGTTTAACATGTTTTCCCTtttaaagtaa-aataataatttaaataataaatacacattt----ttat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3836943 179 + 4876863 TTCTTGCCAAGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATTACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGTACCCCTATCAAATCAATTGGTTTAACATGTTTTCCCTtttaaattaa-aataataatttaaataataaatacacattt----ttat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112726848 179 + 115148730 TTCTTGCCAAGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTATAAAAGGGGTTTCTAAAATTACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGTACCGTTATCAAATCAATTGGTTTAACATCTTTTCCCTTTTCAAGTAA-AATAATAATTTAAATAATAAATACAAGTTT----TTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009673 160 + 190429646 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATAACCTATCTGG-AACCGAAGAAAGCAAGAGTCCAGTGCCCCTAGCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952451 160 + 189454096 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATAACCTATCTGG-AACCGAAGAAAGCAAGAGTCCAGTGCCCCTAGCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344168 160 - 25927173 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATAACCTATCTGG-AACAGAAGAAAGCAAGAGTCCAGTGCCCCTAGCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3373898 164 + 4669795 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATAACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGCGCCCCTAGCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTTTTAT---- i cerAty1.NW_012001672v1 C 0 I 11 s chlSab2.chr7 134331564 164 + 135778131 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATGATGTCACTTGTAAAAGGGGTTTCTAAGATAACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGCACCCCTAGCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT----TTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785562 164 - 2847728 TTCTTGCCGTGATTTCTAAAGTAA---TGAAGAAATAATGTCACTTGTAAAAGGGGTTTCTAAAATAACCTATCTGG-AACAGAAGAAAGCAAGAGTCCGGCGCCCCTAGCCAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT----TTAT i manLeu1.NW_012102221v1 C 0 I 11 s colAng1.NW_012116221v1 899939 164 + 2368649 TTCTTGCCATGATTTCTAAAGTAA---TGAAGAAATAATGTCGCTTGTAAAAGGGGTCTCTAAAATAACCTATCTGG-AACAGAAGAAAGCAAGAGTCCAGCACCCCTGTCAAATCAATTGGTTTAACATGTTTTCCCTTTTAAAGTAA----------------AATAAATACAAATTT----TTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631329 183 - 190850796 TTCTTGCCAAGATTTCTAAAGTACTTAAGAAGAAATAATGTCACTTGTAAAAGAGGTTTCTAAAATTCCCTATCTGGAAACAGCAGAAAGCAAGAGCCGGGAACCTGTATCACGTCAATTGGTTTACCATGTTTTCCCCTTTGAAGGAA-GATGataatttaaataataaatacaaattt----ttat i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406042 182 - 5030052 TTCTTGCCAAGATTTCTAAAGTAA-TAAGAAGAAATAATGTCACTTGTAAAAGAGGTTTCTAAAATTCCCTATCTGGAAACAGTAGAAAGCAAGAGCCTGGAACCCCTATCATGTCAATTGGTTTAACATGTTTTCCCCTTTAAAGTAA-GATAATAATTTAAATAATAAATACAAATTT----TTAT i aotNan1.NW_018492112v1 I 336 C 0 s otoGar3.GL873580 11243097 181 - 11315646 TTGTTCCCAAGGTTTCTAAAGTAA---TCAAGGAATATCGTCCCTTATAAAAGGAGTTTCTAAAACCACCTATCTGGAAATGGAAAAAAACCAGGATCTCTCACCTCTACCAAATTACTTGGTTTAACATTTTTTTCCTTTTAAAGTAATAACAGTAATGTAAATGATAAAAATGTGTTT----TTAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16969481 156 - 59632846 TCATTGCCCAGATTTCTAAAGTTA---TAAA--AATAGTGACA---ATAAAA----------------CCTATCTGGAAACAGAAG--AGGAAGGTTTCTTTACCTCCACCAAATCAGTTGATAGGTCATTTTTTTCCTTTTAAAGTAATAATAGCAATTTGAATAATAAAGCCACATAT----TT-- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=10010.000000 s hg38.chr4_KI270789v1_alt 128768 2 + 205944 tt s panTro5.chr4 192916180 2 + 194502333 tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799854 2 + 195804263 tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837122 2 + 4876863 tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727027 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009833 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952611 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344328 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s calJac3.chr3 189631512 2 - 190850796 tt i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406224 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 I 25 s otoGar3.GL873580 11243278 2 - 11315646 TT i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16969637 0 - 59632846 C e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M e colAng1.NW_012116221v1 900103 0 + 2368649 C e manLeu1.NW_012102221v1 2785726 11 - 2847728 I e chlSab2.chr7 134331728 0 + 135778131 C e cerAty1.NW_012001672v1 3374062 11 + 4669795 I a score=28381.000000 s hg38.chr4_KI270789v1_alt 128770 12 + 205944 atatAATGCCAT s panTro5.chr4 192916182 12 + 194502333 atatAATGCCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799856 12 + 195804263 atatAATGCCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837124 12 + 4876863 atatAATGCCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727029 12 + 115148730 ATATAGTGCCAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009835 12 + 190429646 ATACAGTACCAT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187952613 12 + 189454096 ATACAGTACCAT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24344330 12 - 25927173 ATACAGTACCAT i macNem1.NW_012013133v1 C 0 I 1 s chlSab2.chr7 134331728 10 + 135778131 --ACAGTACCAT i chlSab2.chr7 C 0 I 1 s colAng1.NW_012116221v1 900103 10 + 2368649 --ACAGTACCAT i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189631514 1 - 190850796 -----------t i calJac3.chr3 C 0 I 1 s canFam3.chr16 16969637 4 - 59632846 ---TAAT----- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3406226 25 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M e manLeu1.NW_012102221v1 2785726 11 - 2847728 I e cerAty1.NW_012001672v1 3374062 11 + 4669795 I e otoGar3.GL873580 11243280 0 - 11315646 C a score=35118.000000 s hg38.chr4_KI270789v1_alt 128782 6 + 205944 TTTTAA s panTro5.chr4 192916194 6 + 194502333 TTTTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799868 6 + 195804263 TTTTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837136 6 + 4876863 TTTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727041 6 + 115148730 TTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189009848 6 + 190429646 TTTTAA i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187952626 6 + 189454096 TTTTAA i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24344343 6 - 25927173 TTTTAA i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3374073 6 + 4669795 TTTTAA i cerAty1.NW_012001672v1 I 11 C 0 s chlSab2.chr7 134331739 6 + 135778131 TTTTAA i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2785737 6 - 2847728 TTTTAA i manLeu1.NW_012102221v1 I 11 C 0 s colAng1.NW_012116221v1 900114 6 + 2368649 TTTTAA i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189631516 5 - 190850796 tttta- i calJac3.chr3 I 1 C 0 s canFam3.chr16 16969641 4 - 59632846 TTTT-- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3406226 25 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M e otoGar3.GL873580 11243280 0 - 11315646 C a score=1517616.000000 s hg38.chr4_KI270789v1_alt 128788 185 + 205944 TATAGTATCATTTT--------TCTACT-GGGATTTTATAGTTTAATAGACGTTCATCATTAGTGTGCT--GTTTCAAATCCTGGCCCTGCTCTATATTTTTTGGTTGGTTTGTTTGGATATTATTAC------CAT-------AAAAACAAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT s panTro5.chr4 192916200 187 + 194502333 TATAGTATCATTTT--------TCTACT-GGGATTTTATAGCTTAACAGACATTCATCATTAGTGTGCTAAGTTTCAAATCCTGGCCCTGCTCTATATTTTTTGGTTGGTTTGTTTGGATATTATTAC------CAT-------AAAAACAAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192799874 187 + 195804263 TATAGTATCATTTT--------TCTACT-GGGATTTTATAGCTTAACAGACATTCATCATTAGTGTGCTAAGTTTCAAATCCTGGCCCTGCTCTATATTTTTTGGTTGGTTTGTTTGGATATTATTAC------CAT-------AAAAACAAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837142 187 + 4876863 TATAGTATCATTTT--------TCTACT-GGGATTTTATAGTTTAATAGACATTCATCATTAGTGTGCTAAGTTTCAAATCCTGGCCCTGCTCTATATTTTTTGGTTGGTTTGTTTGGATATTATTAC------CAT-------AGAAATAAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTACTGGAAATAAAAGTTTATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727047 187 + 115148730 TATACTATCATTTT--------TCTACT-GGGATTTTATAGTTTAATAGACATTCATCATTAGCATGCTAAGTTTCAAATCCTGGCCCTGCTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------AAAAACAAAAACAGGCTTG-CAA-TGGCTGCAGATTCATAGAAGATTATTAGAAATAAAAGTTTatt i nomLeu3.chr7b C 0 I 649 s rheMac8.chr5 189009854 180 + 190429646 TATAGTATCATTTT--------TCT-CT-GGGATTTTATAGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTGCTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952632 180 + 189454096 TATAGTATCATTTT--------TCT-CT-GGGATTTTATAGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTGCTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344349 180 - 25927173 TATAGTATCATTTT--------TCT-CT-GGGATTTTATAGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTGCTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374079 181 + 4669795 TATAGTATCATTTT--------TCTACT-GGGATTTTGTTGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTACTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331745 187 + 135778131 TATAGTATAATTTT--------TCTACTGGGGATTTTATAGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTGCTCTATATTTTTTGATTTGTTTGTTTGGATATTATTACCAAAAACAC-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAG-AGATTATTAGAAATAAAAGTTTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785743 181 - 2847728 TATAGTATCATTTT--------TCTACT-GGGATTTTGTAGTTTAATAGACTTTCATCATTAGTGTGCTAAGTTTCAAATCCTGTTCCTGCTCTATATTTTTTGGTTGGTTTGTTTGGATATTATTAC------CAT-------------AAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900120 187 + 2368649 TATAGTATCATTTT--------TCTACT-GGGATTTTATAGTTTAATAGACTTTAATCATTAGTGTGCTAAGTTTCAAATCCTGGTCCTGCTCTATATTTTTTGGTTTGTTTGTTTGGATATTATTAC------CAT-------AAAAACAAAAACAGGCTTG-CAA-TGGCTGCAGATTCACAGAAGATTATTAGAAATAAAAGTTTATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631521 185 - 190850796 CATAGTATCATTTT--------TCTACT-GGGATTTTATAGTCTAATAGAAATTCATCATTAGTGTGCTAAGTTTCAAATCCTGGCCCTGCTCTATATTTTCTG----GTTTGTTTGGATATTATTAC------CAT-----AAAAAAAAGGAAGCAGCCTTG-CGG-TGGCTGCAAATTCACAGAAGATAATAAGAAATAAAAGTCTGTT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406251 182 - 5030052 TATAGTATCATTTT--------TCTACT-AGGATTTTATAGTCGAATAGAAATTCATCATTAATGTGCTAAGTTTCAAATCCTGGCCCTGCTCTTTATTTTTCG----GTTTGTTTGGATATTATTAC------CATAAAAAAAAAAAAAGGAAACAGGCTTG-CAG-TGGCTGCAAATTCACAG--------AAGAAATAAAAGTTTATT i aotNan1.NW_018492112v1 I 25 C 0 s otoGar3.GL873580 11243280 173 - 11315646 -----------CAT--------TCTGTT-AGTATGGTATGATTTCACAGACATTCATCATTAGTGTGCTAAGGTTCAAATTCTGGCCCGCAGGTATATTA--------GTTTGTTGGGATGTCATTAC------CAT---AACAAAGTAAGTGAAGAGGCTTGTCAC-TGGTTCCAAATTCACAGAAGATTATAGGAAATAAAAGTTTATC i otoGar3.GL873580 C 0 I 4 s canFam3.chr16 16969645 191 - 59632846 TATAGTACTATTTTCTTGAATATCTATT-TAGATTATATTATTTCATAGATACTGAACATTGTTATACTAAGATTCAAATCCTGGCCTAGCTCTATATTTTT------GT---TTTGGAGATTTTTAC------AAT---GGGAAAATAAGGAAACAAGTTTA-TAATTGGATCCAAATTCACAGAAGATTATAAGAAATAAAGATTTATC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=38808.000000 s hg38.chr4_KI270789v1_alt 128973 8 + 205944 -GTTAAATA s panTro5.chr4 192916387 8 + 194502333 -GTTAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800061 8 + 195804263 -GTTAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837329 8 + 4876863 -GTTAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189010034 8 + 190429646 -GTTAAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952812 8 + 189454096 -GTTAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344529 8 - 25927173 -GTTAAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374260 8 + 4669795 -GTTAAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331932 8 + 135778131 -GTTAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785924 8 - 2847728 -GTTAAATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900307 8 + 2368649 -GTTAAATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631706 7 - 190850796 -GTT-AGTA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406433 7 - 5030052 -GTT-ACTA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11243457 7 - 11315646 -GTTAATC- i otoGar3.GL873580 I 4 C 0 s canFam3.chr16 16969836 8 - 59632846 TGTTAATT- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17519677 643 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M e nomLeu3.chr7b 112727234 649 + 115148730 I a score=769620.000000 s hg38.chr4_KI270789v1_alt 128981 108 + 205944 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTTTTTATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTACGTAAGT-TAACCAGTTCATATGCAT s panTro5.chr4 192916395 108 + 194502333 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTTTTTATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTATGTAAGT-TAACCAGTTCATATGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800069 108 + 195804263 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTTTTTATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTATGTAAGT-TAACCAGTTCATATGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837337 108 + 4876863 TTTCGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTTTTTATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTACGTAAGT-TAACCAGTTCATATGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189010042 99 + 190429646 TTTTGTCACGGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTT------TAAA---------------TATCA----AATTTATTACTTTCATCACTTACATAAGT-TAACTAGTTCATATGCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952820 103 + 189454096 TTTTGTCACGGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTT--TATCTAAA---------------TATCA----AATTTATTACTTTCATCACTTACATAAGT-TAACTAGTTCATATGCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344537 103 - 25927173 TTTTGTCACGGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTT--TATCTAAA---------------TATCA----AATTTATTACTTTCATCACTTACATAAGT-TAACTAGTTCATATGCAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374268 106 + 4669795 TTTTGTCACAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTT--TATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTACGTAAGT-TAACTAGTTCATATGCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134331940 106 + 135778131 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTT--TATCTAAA------------TATTATCA----AATTTATTACTTTCGTCACTTACATAAGT-TAACTAGTTCATATGCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2785932 106 - 2847728 TTTTGTCACAGCAAAATGTATTTTTCTCTAAGAG-AAAAAA-GTT--TATCTAAA------------TATTATCA----AATTTATTACTTTCATCACTTACGTAAGT-TAACTAGTTCATATGCAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900315 101 + 2368649 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAG-AAAAAA-GTTTTTATCTAAA---------------TATCA----AATTTATTACTTTCATC----ACGTAAGT-TAACTAGTTCATATGCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631713 104 - 190850796 TTTTGCCATAGCAAAATATATTTTCCTTTAAGAG-AAAAAA-GCTTTTACCTAAT---------------TATCA----AATGTGTTGCTTTCACCGCTTACATAAA--AACCTCGTTCCTGTGCAT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406440 105 - 5030052 TTTTGTCATAGCAAAATATATTTTTCTTTAAGAGAAAAAAA-GTTTTTACCTAAT---------------TATCA----AATTTATTATTTTCATCACTTACATAAA--AAACTCGTTCCTATGCAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17520320 108 - 93316391 TTTTGTTATAGCAAAATATATTCTTCTCAAAGAA-AAAAAT-ATTCTCTTGTAAA------------TATTATCA----AATTTATCACATTTATTGCTTACATAAAT-TAACCAATTCATATACAT i micMur3.chr14 I 643 I 76 s otoGar3.GL873580 11243464 108 - 11315646 TTTTGTCATAGTAAACTATATTTTTCTTAAAAAG-AAAAAA-GTCATCATCTAAA------------TATTACCA----AATTTGGCACTTTTATT-CTTATAAGAGTATAAGCAATTCATGCACAC i otoGar3.GL873580 C 0 I 2 s canFam3.chr16 16969844 116 - 59632846 TATTGTCCTAGTAAGATA------CTTTCAGGTG-AAAAAATATTGTCATCTAATAAAAGTGATAAGTCTTATCATTTTAAGACATCACTTTTATTACTTACATA--T-TAATCAAATTGT-TACAT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M e nomLeu3.chr7b 112727234 649 + 115148730 I a score=247685.000000 s hg38.chr4_KI270789v1_alt 129089 36 + 205944 CTGTATGTCTCAGTAGAGACCACCAACTTCAACATT s panTro5.chr4 192916503 36 + 194502333 CTGTATGTCTCAGTAGAGAAAACCAACTTCAACATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800177 36 + 195804263 CTGTATGTCTCAGTAGAGAAAACCAACTTCAACATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837445 36 + 4876863 CTGTATGTCTCAGTAGAGACAACCAACTTCAACATT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189010141 36 + 190429646 CTATATGTCTAAGTAGAGACAACCAACTTCAACATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952923 36 + 189454096 CTATATGTCTAAGTAGAGACAACCAACTTCAACATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344640 36 - 25927173 CTATATGTCTAAGTAGAGACAACCAACTTCAACATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374374 36 + 4669795 CTATATGTCTAAATAGAGACAACCAACTTCAACAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332046 36 + 135778131 CTATATGTCTAAGTAGAGACAACCAACTTCAACATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786038 36 - 2847728 CTATATGTCTAAGTAGAGACAACCAACTTCAACATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900416 36 + 2368649 CTATATGTCTAAGTAGAGACAACTAACTTCAACATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631817 36 - 190850796 CTGCGTGTCTAAGCAGAGACAACGGACTTCAACGCT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406545 36 - 5030052 CTACATGTCTAAGTAGAGACAACCGACTTCAACACT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11243574 33 - 11315646 CT---TGTGTAAATAGAGATAACAGACCCAGACATT i otoGar3.GL873580 I 2 C 0 s canFam3.chr16 16969960 35 - 59632846 CTGCTTCT-TAAGTAGAATTAATTGATCTAAATATT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17520428 76 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M e nomLeu3.chr7b 112727234 649 + 115148730 I a score=45204.000000 s hg38.chr4_KI270789v1_alt 129125 6 + 205944 AATGTG s panTro5.chr4 192916539 6 + 194502333 ACTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800213 6 + 195804263 ACTGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837481 6 + 4876863 AATGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727883 6 + 115148730 AATGTG i nomLeu3.chr7b I 649 C 0 s rheMac8.chr5 189010177 6 + 190429646 AATGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952959 6 + 189454096 AATGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344676 6 - 25927173 AATGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374410 6 + 4669795 AATGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332082 6 + 135778131 AATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786074 6 - 2847728 AATGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900452 6 + 2368649 AATGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631853 6 - 190850796 CACGTG i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406581 6 - 5030052 CATGTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11243607 6 - 11315646 AATACA i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16969995 6 - 59632846 AATATA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e micMur3.chr14 17520428 76 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=497659.000000 s hg38.chr4_KI270789v1_alt 129131 54 + 205944 TTTTATTTTCTCAA--AGTTGGACTTCAGAC-AAAAATTATAAAACTGGAAGATAGT s panTro5.chr4 192916545 54 + 194502333 TTTTATTTTCTCAG--AGTTGGACTTGAGAC-AAAAATTATAAAACTGGAAGATAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800219 54 + 195804263 TTTTATTTTCTCAG--AGTTGGACTTGAGAC-AAAAATTATAAAACTGGAAGATAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837487 54 + 4876863 TTTTATTTTCTCCA--AGTTGGACTTCAGAC-AAAAATTATAAAACTGGAAGATAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727889 54 + 115148730 TTGTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTATAAAACTGAAAGATAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010183 54 + 190429646 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187952965 54 + 189454096 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344682 54 - 25927173 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374416 54 + 4669795 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332088 54 + 135778131 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786080 54 - 2847728 TTTTATTTTCTCAA--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAAAGATAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900458 54 + 2368649 TTTCATTTTCTCAC--AGTTTGACTTCAGAC-AAAAATTCTAAAACTGAACGATAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631859 54 - 190850796 TTTTATTTTCCCCA--AGTTTGACTTCAGAT-AGAAATTATAAAAGTGAAAGACAGT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3406587 54 - 5030052 TTTTATTTTCTCCA--AGTTTGACTTCAGAT-AAAAATTATAAAAGTGGAAGACAGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17520504 54 - 93316391 TTTTATTTTCT-AA--AGTTTGACTTCAGACTATAAATTATAAAAGTGAAAGATGGT i micMur3.chr14 I 76 C 0 s otoGar3.GL873580 11243614 55 - 11315646 TCCTATTTTCTCAA--AGTTTGACTCCAGATTAAAAATTATAAAAGTCCAAGATGGT i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16970001 45 - 59632846 ---TCCTTTTTTAATCAGTTTGACTTCAGATTAAAAATTA------TGAAAGAT--- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1010809 992 - 2196201 M e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=268778.000000 s hg38.chr4_KI270789v1_alt 129185 23 + 205944 AATATTTAAGGATGCCTTCCTAA s panTro5.chr4 192916599 23 + 194502333 AATATTTAAGGATGCCTTCCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800273 23 + 195804263 AATATTTAAGGATGCCTTCCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837541 23 + 4876863 AATATTTAAGGATGCCTTCCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727943 23 + 115148730 AATATTTAAGGATGCCTTCCTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010237 23 + 190429646 AATATTTAAGGATGTCTTCCTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953019 23 + 189454096 AATATTTAAGGATGTCTTCCTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344736 23 - 25927173 AATATTTAAGGATGTCTTCCTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374470 23 + 4669795 AATATTTAAGGATGTCTTCCTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332142 23 + 135778131 AATATTTAAGGATGTCTTCCTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786134 23 - 2847728 AATATTTAAGGATGTCTTCCTAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900512 23 + 2368649 AATATTTAAGGGTGTCTTCCTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189631913 23 - 190850796 AATACTTAATGATGCCTTCCTAA i calJac3.chr3 C 0 I 312 s cebCap1.NW_016107886v1 1011810 23 - 2196201 AATACTTAATGATGCCTTCCTAA i cebCap1.NW_016107886v1 M 992 C 0 s aotNan1.NW_018492112v1 3406641 23 - 5030052 AATACTTAATGATGCCTTCCTGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17520558 23 - 93316391 AATATTAAATGATGTCTTCTTAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11243669 23 - 11315646 TGTATTTCATGATGTTTTCTTAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16970046 23 - 59632846 GATGTTTAATGATGCCTTCTTAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=1165848.000000 s hg38.chr4_KI270789v1_alt 129208 125 + 205944 AATTATCTTAAGTACATCGAATATTTCCAAAAA-AT-GTTTTTCCTCTGAGAGTTTCCTATGCTGGTAAGAAATATTTTGGGAACAGAATAGACAAGGATTAAGTGAAAAATAAATGTCCCTTTTTA s panTro5.chr4 192916622 125 + 194502333 AATTATCTTAAGTACATCAAATATTTCCAAAAA-AT-GTTTTTCCTCTGAGAGTTTCGTATGCTGGTAAGAAATATTTTGGGAACAGAATAGACAAGGATTAAGTGAAAAATAAATGTCCCTTTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800296 125 + 195804263 AATTATCTTAAGTACATCAAATATTTCCAAAAA-AT-GTTTTTCCTCTGAGAGTTTCGTATGCTGGTAAGAAATATTTTGGGAACAGAATAGACAAGGATTAAGTGAAAAATAAATGTCCCTTTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837564 125 + 4876863 AATTATCTTAAGTACATCAAATATTTCCAAAAA-AT-GTTTTTCCTCTGAGAGTTTCGTATGCTGGTAAGAAATATTTTAGGAACAGAATAGACAAGGATTAAGTGAAAAATAAATGTCCCTTTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112727966 124 + 115148730 AATTATCTTAAGTACATCAAATATTTCCAAAAA-AT-GTTTTTCTTCTGAGGGTTTCGTATGCTGGTAAGAAATATTTTTGGAACAGAATACAGGAGGATTAAGTGAAAAATAAAT-TCCCTTTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010260 126 + 190429646 AATTATCTTAAGTACATCAAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGAGAAGGATTAAGTGAAAAACAAATGTCCCCTTTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953042 126 + 189454096 AATTATCTTAAGTACATCAAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGAGAAGGATTAAGTGAAAAACAAATGTCCCCTTTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344759 126 - 25927173 AATTATCTTAAGTACATCAAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGATTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGAGAAGGATTAAGTGAAAAACAAATGTCCCCTTTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374493 126 + 4669795 AATTATCTTAAGTACATCGAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGGGAAGGATTAAGTGAAAAACAAATGCCCCCTTTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332165 126 + 135778131 AATTATCTTAAGTACATCAAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGAGAAGGATTAAGTGAAAAACAAATGTCCCCTTTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786157 126 - 2847728 AATTATCTTAAGTACATCGAATATTTCCAAAAATGT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAGAATAGAGAAGGATTAAGTGAAAAACAAATGCCCCCTTTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900535 125 + 2368649 AATTATCTTAAGTACATCAAATATTTCCAAAAATAT-GTTTTTCTTCTGAGGGTTTTGTATGCTGGTAAGAAATATTTTTGGAACAG-ATAGAGAAGGATTAAGTGAAAAACAAATGTCCCCTTTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632248 116 - 190850796 AACTATCTTAAGTACATCAAACATTTCCCACAAAAA-GTTTTTCTTCTGAGAGTTTTGTATGCTGGTAAGAAACATTTTTATAA-------GTGAAGGAGTCAATGAAAAATGAATGTCCCCTT--- i calJac3.chr3 I 312 C 0 s cebCap1.NW_016107886v1 1011833 101 - 2196201 AATTATCTTAAGTACATCAAACATTTCCCAAAAAAA-GTTTTTCTTCTGAGAGTTTCGTATGCTGGTAAGA----------------------GAAGGATTAAGTGAAAAATAAATGCCCCCTT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3406664 117 - 5030052 AGTTATCTTAAGTACATCAAACATTTCCCCAAAAAA-AGTTTTTCTCTGAGAGTTTTGTATGCTGGTAAGAAATATTTTTATGA---------GAAGGATTAAATGAAAAATAAATGTCCCCTTTTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17520581 126 - 93316391 AATTTTCTTAAGAACATAAAATATTTCCAAAAAAATTATTTTTCTTTTAAGAGTA-TGCATACCAGTAAGAAATGTTTTTAGAACAGAATAGAGAAAAATTAAATGTACAGTAAAAGTTCCCTTTTA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11243692 123 - 11315646 AATTTTCTCAAGAACAAAAAATATTTCCAGAAA----ACTTTTTTCGTAAGAGTATTAAATGCCAGTAAGTAATATTTTCTGAGCAGAATAGACAAAAATTAAATGTAACATAAATGTCCCCTTTTA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16970069 98 - 59632846 AATTCTCTTAAGAACATGAAATAT-----AAAGAGA-AT---------------------TGCATATCAGAAATGTTCTT-GAGCAGAAAAGCAAAATGTTAAATGAAAAA-AAATGCCCcccttca i canFam3.chr16 C 0 I 901 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=735337.000000 s hg38.chr4_KI270789v1_alt 129333 70 + 205944 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCACGGACTTCCAGTTATTTTCTATACATAGGAAGT s panTro5.chr4 192916747 70 + 194502333 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCACGGACTTCCAGTTATTTTCTATACATAGAAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800421 70 + 195804263 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCACGGACTTCCAGTTATTTTCTATACATAGAAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837689 70 + 4876863 CTATTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCACGGACTTCCAGTTATTTTCTATACATAGAAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728090 69 + 115148730 CTCTTAGTACAGTTCTCAGAGGAAA-CAGTTTCTTGCACGGACTTCCAGTTATTTTCTGTACGTAGAAAG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010386 70 + 190429646 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTTCCAGTTATTTTCTATACATAGAAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953168 70 + 189454096 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTTCCAGTTATTTTCTATACATAGAAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344885 70 - 25927173 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTTCCAGTTATTTTCTATACATAGAAAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374619 70 + 4669795 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTTCCAGTTATTTTCTATACATAAAAAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332291 70 + 135778131 CTCTTATTCCAGTTCTCAGAGGAAA-CACTTTCTTGCCCGGACTTCCAGTTATTTTCTGTACATAGAAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786283 70 - 2847728 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTCCCAGTTATTTTCTATACATAGAAAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900660 70 + 2368649 CTCTTATTCCAGTTCTCAGAGGAAA-CAGTTTCTTGCCCGGACTTCCAGTTATTTTCTGTACATAGAAAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632364 66 - 190850796 ---TTACTCCAGTTCTCAGAAAATA--AGTTTTTTGCATGGACTTTCAGTTATTTTCTATACACAGAAAGT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1011934 68 - 2196201 ---TTACTCCAGTTCTCAGAAAAAAACAGTTTTTTGTATGGACTTCCAGTTATTTTCTATACATAGAAAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3406781 71 - 5030052 CTCTTACTCCAGTTCTCAGAAAAAAACAGTTTTTTGCATGGACTTCCAGTTATTTTCTATACATAGAAAGT i aotNan1.NW_018492112v1 C 0 I 243 s micMur3.chr14 17520707 70 - 93316391 CTTTTGTTTCAGTTGTCTGAGGAAA-CAGTTTCTTGTAAAGACTTTCAGTTATTTTCTATGCATAGAAAGT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11243815 69 - 11315646 CATTTGTTCCAGTTCTCAGGGGAAA-CAGTTTCTTGCACAGACTTTTAGTTATTTTCTATAC-TAGAAAGT i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=33349.000000 s hg38.chr4_KI270789v1_alt 129403 4 + 205944 ATAT s panTro5.chr4 192916817 4 + 194502333 ATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800491 4 + 195804263 ATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837759 4 + 4876863 ATAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189010456 4 + 190429646 ATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953238 4 + 189454096 ATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344955 4 - 25927173 ATAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374689 4 + 4669795 ATAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332361 4 + 135778131 ATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786353 4 - 2847728 ATAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900730 4 + 2368649 ATAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632430 4 - 190850796 GTAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1012002 4 - 2196201 GTGT i cebCap1.NW_016107886v1 C 0 C 0 s micMur3.chr14 17520777 4 - 93316391 ATAT i micMur3.chr14 C 0 I 213 s otoGar3.GL873580 11243884 4 - 11315646 ATAT i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3406852 243 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M e nomLeu3.chr7b 112728159 0 + 115148730 C a score=374503.000000 s hg38.chr4_KI270789v1_alt 129407 50 + 205944 TATATATAACAATATAAAATTTATCATGAATGAACTACTCTATACACACT------- s panTro5.chr4 192916821 50 + 194502333 TATATATAACAATATAAAATTTATCATGAATGAACTAGTCTCTACACACT------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800495 50 + 195804263 TATATATAACAATATAAAATTTATCATGAATGAACTAGTCTCTACACACT------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837763 50 + 4876863 TATATATAACAATATAAAATTTATCATGAATGAACTACTCTATACACACT------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728159 50 + 115148730 TATATATAACAATATAAAATTTATCATGAATGAACTACTCTATACACACT------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010460 50 + 190429646 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATGCACAGT------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953242 50 + 189454096 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATGCACACT------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24344959 50 - 25927173 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATGCACACT------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374693 50 + 4669795 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATGCACACT------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332365 50 + 135778131 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATACACACT------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786357 50 - 2847728 TATATATAGCAATATAAAATTTGTCATGAATGAACTACTCTATGCACACT------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900734 50 + 2368649 TATGTATAGCAATGTAAAATTTATCATGACTGAACTACTCTATACACACT------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632434 49 - 190850796 TCTAT-TAATGGTATATAATTTATCATGAACGAACTGTTCTATACACACT------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1012006 50 - 2196201 TATATATAATGATAAACAATTTATCATGAGTGAACTGTTCTAGACACACT------- i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11243888 57 - 11315646 TGTGTGTAATAGTATAAAATTTATCATAAATCTATTATACTATGCATATTTTCTGTT i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17520781 213 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3406852 243 - 5030052 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=107624.000000 s hg38.chr4_KI270789v1_alt 129457 11 + 205944 CTGACAGTTAC s panTro5.chr4 192916871 11 + 194502333 CTGACAGTTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800545 11 + 195804263 CTGACAGTTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837813 11 + 4876863 CTGACAGTTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728209 11 + 115148730 CTGACAGTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010510 11 + 190429646 CTGACAGTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953292 11 + 189454096 CTGACAGTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345009 11 - 25927173 CTGACAGTTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374743 11 + 4669795 CTGACAGTTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332415 11 + 135778131 CTGACAGTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786407 11 - 2847728 CTGACAGTTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 900784 11 + 2368649 CTGACAGTTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632483 11 - 190850796 CTGAGAGTTAC i calJac3.chr3 C 0 I 278 s cebCap1.NW_016107886v1 1012056 11 - 2196201 CTGAGAGTTAC i cebCap1.NW_016107886v1 C 0 I 280 s aotNan1.NW_018492112v1 3407095 10 - 5030052 cTGACAGTTA- i aotNan1.NW_018492112v1 I 243 C 0 s otoGar3.GL873580 11243945 11 - 11315646 TTGATAGTTAC i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17520781 213 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=974958.000000 s hg38.chr4_KI270789v1_alt 129468 115 + 205944 TTTTTAAGTTAAACAATATCTCGAGTGTCTCACATATCTATACTCTCACAAGTATTACATA----TATA-TTACATA--CATACTTGCCTAATTAGTTTTTGGTGACAATATATTGTATTAT s panTro5.chr4 192916882 115 + 194502333 TTTTTAAGTTAAACAATATCTCGAGTATCTCACATATCTATACTCTCACAAGTATTACATA----TATA-TTACATA--CATACTTGCCTAATTAGTTTTTTGTGACAATATATTGTATTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800556 115 + 195804263 TTTTTAAGTTAAACAATATCTCGAGTATCTCACATATCTATACTCTCACAAGTATTACATA----TATA-TTACATA--CATACTTGCCTAATTAGTTTTTGGTGACAATATATTGTATTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837824 115 + 4876863 TTTTTAAGTTAAACAATATCTCGAGTATCTCACATATCTATACTCTCAGAAGTATTACATA----TATA-TTACATA--CATACTTGCCTAATTAGTTTTTGGTGACAATATATTGTATTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728220 115 + 115148730 TTTTTAAGTTAAACAATATCTTGAATATCTCACATATCTGTACTCTCACAAGTGTTACATA----TATA-TTACATA--CATACTTGCCTAATTAGTTTTTGGTGACAATATATTGTATTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010521 115 + 190429646 TTTTTAAGTTAAACAGTATCTCAAATATCTCACATATCTATACTCTCACAAGTATTACGTA----TATA-TTACATA--TATACTTGCCTAATTAGTTTTTGGTGACAATATATTATATTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953303 115 + 189454096 TTTTTAAGTTAAACAGTATCTCAAATATCTCACATATCTATACTCTCACAAGTATTACGTA----TATA-TTACATA--TATACTTGCCTAATTAGTTTTTGGTGACAATATATTATATTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345020 115 - 25927173 TTTTTAAGTTAAACAGTATCTCAAATATCTCACATATCTATACTCTCACAAGTATTACGTA----TATA-TTACATA--TATACTTGCCTAATTAGTTTTTGGTGACAATATATTATATTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3374754 111 + 4669795 TTTTTAAGTTAA----TATCTCAAATATCTCACATATCTATACTCTCACAAGTATTACGTA----TATA-TTACATA--TATACTTGCCTAATTAGTTTTTGGTGACAATATATTGTATTAT i cerAty1.NW_012001672v1 C 0 I 11 s chlSab2.chr7 134332426 115 + 135778131 TTTTTAAGTTAAACAATATCTCAAATATCTCACATATCTATACTCTAATAAGTATTACATA----TATA-TTACATA--TATACTTGCCTAATTAGTTTTTGGTGACAATATATTGCATTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786418 115 - 2847728 TTTTTAAGTTAAACAATATCTCAAATATCTCACATATCTATACTCTCACAAGTATTATGTA----TATA-TTACATA--TATACTTGCCTAATTAGCTTTTGGTGACAATATATTGTATTAT i manLeu1.NW_012102221v1 C 0 I 11 s colAng1.NW_012116221v1 900795 115 + 2368649 TTTTTATGTTAAACAATATCTCGAATATCTCACATATCTATACTCTCACAAGTATCACATA----TATA-TTACATA--TATACTTGCCTAATTCGTTTTTCGTGACAATATATTGTATTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189632772 118 - 190850796 TTTTCAAGTTAAACAACATCTCGAATGTCTCACATATCTATACTCTTACAAGTATCACATA----TATACTTGCATAATTAGGCACAATTAATTAGTTTTTGGTGACAAGATATTGTATTAT i calJac3.chr3 I 278 C 0 s cebCap1.NW_016107886v1 1012347 122 - 2196201 TTTCTAAGTTAAACAATATCTCGAATGTCTCACATATCTATACTCTTACAAGTATTACATATATGTATACTTGCATAATTAAGCAAAATTAATTGGTTTTTGGTGACTAGATATTGTATTAT i cebCap1.NW_016107886v1 I 280 C 0 s aotNan1.NW_018492112v1 3407105 118 - 5030052 TTTTTAAGTTAAACAGTATCTCGAATGTCTCACATATCTATACTCTTACAAGTATTACATA----TATACTTGCATAATTAGGCAAAATTAATTAGTTTTTGGTGACAAGATATTGTATTAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11243956 98 - 11315646 TTTTAAAATTAATCAGTATCTCTTCTATCACCATTATCTAT-------------TCACATC-------A-CTACACA--TATACTTGCCTCATTAGTTTTTGGTGATAATACA-CATATCAT i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17520781 213 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=32443.000000 s hg38.chr4_KI270789v1_alt 129583 6 + 205944 TATATG s panTro5.chr4 192916997 6 + 194502333 TATATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800671 6 + 195804263 TATATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837939 6 + 4876863 TATATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728335 6 + 115148730 TGTATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010636 6 + 190429646 TATACA i rheMac8.chr5 C 0 I 8 s macFas5.chr5 187953418 6 + 189454096 TATACA i macFas5.chr5 C 0 I 8 s macNem1.NW_012013133v1 24345135 6 - 25927173 TATACA i macNem1.NW_012013133v1 C 0 I 8 s chlSab2.chr7 134332541 6 + 135778131 TATACA i chlSab2.chr7 C 0 I 8 s colAng1.NW_012116221v1 900910 6 + 2368649 TATACA i colAng1.NW_012116221v1 C 0 I 8 s calJac3.chr3 189632890 6 - 190850796 TATATG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1012469 6 - 2196201 TATATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3407223 6 - 5030052 TATATG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11244054 6 - 11315646 TGTGTT i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17520781 213 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M e manLeu1.NW_012102221v1 2786533 11 - 2847728 I e cerAty1.NW_012001672v1 3374865 11 + 4669795 I a score=352775.000000 s hg38.chr4_KI270789v1_alt 129589 43 + 205944 AATGTACTATAATTTTTAATAGCAAGTCTCTTTGCAAGTGTAG s panTro5.chr4 192917003 43 + 194502333 AATGTACCGTAATTTTTAATAGCAAGTCTCTTTGCAAGTGTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800677 43 + 195804263 AATGTACCGTAATTTTTAATAGCAAGTCTCTTTGCAAGTGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837945 43 + 4876863 AATGTACCATAATTTTTAATAGCAAGTCTCTTTGCAAGTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728341 43 + 115148730 AATGTACCATCATTTTTAATAACAAGTCTCTTTGCAAGGGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010650 43 + 190429646 AATGTACCATAATTTTTAATAACAAATTTCTTTGCAAGGGTAG i rheMac8.chr5 I 8 C 0 s macFas5.chr5 187953432 43 + 189454096 AATGTACCATAATTTTTAATAACAAATCTCTTTGCAAGGGTAG i macFas5.chr5 I 8 C 0 s macNem1.NW_012013133v1 24345149 43 - 25927173 AATGTACCATAATTTTTAATGACAAATCTCTTTGCAAGGGTAG i macNem1.NW_012013133v1 I 8 C 0 s cerAty1.NW_012001672v1 3374876 43 + 4669795 AATGTACCATAATTTTTAATAACAAATCTCTTTGCAAGGGTAG i cerAty1.NW_012001672v1 I 11 C 0 s chlSab2.chr7 134332555 43 + 135778131 AATGTACCATAATTTTTAATAACAAATCTCTTTGCAAGGGTAG i chlSab2.chr7 I 8 C 0 s manLeu1.NW_012102221v1 2786544 43 - 2847728 AATGTACCATAATTTTTAATAACAAATCTCTTTGCAAGGGTAG i manLeu1.NW_012102221v1 I 11 C 0 s colAng1.NW_012116221v1 900924 43 + 2368649 AATGTACCATAATTTTTAATAACAAATCTGTTTGCAAGGGTAG i colAng1.NW_012116221v1 I 8 C 0 s calJac3.chr3 189632896 39 - 190850796 AACGTACCGTAATTTTTGATAACAAGTC----TGCAAGGACAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1012475 39 - 2196201 AACGTACCTTAATTTTTAATAACAAGTC----TGCTAGGATAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3407229 39 - 5030052 AATGTACCACAATTTTTAATAACAAGTT----TGCAAGGATAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11244060 42 - 11315646 AATATACAATCACTTTTAA-AATAATTCTGTTTACAAAGATAT i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17520781 213 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=386776.000000 s hg38.chr4_KI270789v1_alt 129632 40 + 205944 CTCCAGCTTCTATTAGGAGTGAAATCCCTGGATAAAATAT s panTro5.chr4 192917046 40 + 194502333 CTCCAGCTTCTATTAGGAGTGAAATCCCTGGATAAAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800720 40 + 195804263 CTCCAGCTTCTATTAGGAGTGAAATCCCTGGATAAAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3837988 40 + 4876863 CTCCAGCTTCTATTAGGAGTGAAATCCCTGGATAAAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728384 40 + 115148730 CTCCAGCTTCTATTAGGAGTGAAATCCCTGGATACAAGAT i nomLeu3.chr7b C 0 I 4 s rheMac8.chr5 189010693 39 + 190429646 CTCCAGCTTCTATTAGGAGTGAAAT-CCTGGATAAAAGAT i rheMac8.chr5 C 0 I 4 s macFas5.chr5 187953475 39 + 189454096 CTCCAGCTTCTATTAGGAGTGAAAT-CCTGGATAAAAGAT i macFas5.chr5 C 0 I 4 s macNem1.NW_012013133v1 24345192 39 - 25927173 CTCCAGCTTCTATTAGGAGTGAAAT-CCTGGATAAAAGAT i macNem1.NW_012013133v1 C 0 I 4 s cerAty1.NW_012001672v1 3374919 39 + 4669795 CTCCAGCTTCTGTTAGGAGTGAAAT-CCTGGATAAAAGGT i cerAty1.NW_012001672v1 C 0 I 4 s chlSab2.chr7 134332598 39 + 135778131 CTCCAGCTTCTATTAGGAGTGAAAT-CCTGGATAAAAGAT i chlSab2.chr7 C 0 I 4 s manLeu1.NW_012102221v1 2786587 39 - 2847728 CTCCAGCTTCTGTTAGGAGTGAAAT-CCTGGATAAAAGAT i manLeu1.NW_012102221v1 C 0 I 4 s colAng1.NW_012116221v1 900967 39 + 2368649 CTGCAGCTTCTATTAGGAGTGAAAT-CCTGGATAGAAGAT i colAng1.NW_012116221v1 C 0 I 4 s calJac3.chr3 189632935 40 - 190850796 CTCCAGCTTGAGTtaggagtgaaatccctggattaaagat i calJac3.chr3 C 0 I 7 s cebCap1.NW_016107886v1 1012514 40 - 2196201 CTCCAGCTTCGGTTAGCAGAGAAATCCCTGGATTAAAGAT i cebCap1.NW_016107886v1 C 0 I 6 s aotNan1.NW_018492112v1 3407268 40 - 5030052 CTCCAGCTTCAGTTAGGAGTGAAATCCCTGGATTAAAGGT i aotNan1.NW_018492112v1 C 0 I 6 s micMur3.chr14 17520994 40 - 93316391 CTCCAGTTTCTATTAGGAGTGAAATCGTTGGATAAAAGAT i micMur3.chr14 I 213 I 6 s otoGar3.GL873580 11244102 40 - 11315646 CTCCAGATTGTCTGGGGAGTGAAGTCGTTGGATAAAAGAT i otoGar3.GL873580 C 0 I 6 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13115480 1699 - 14256875 M a score=483171.000000 s hg38.chr4_KI270789v1_alt 129672 40 + 205944 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT s panTro5.chr4 192917086 40 + 194502333 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800760 40 + 195804263 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838028 40 + 4876863 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728428 40 + 115148730 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT i nomLeu3.chr7b I 4 C 0 s rheMac8.chr5 189010736 40 + 190429646 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i rheMac8.chr5 I 4 C 0 s macFas5.chr5 187953518 40 + 189454096 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i macFas5.chr5 I 4 C 0 s macNem1.NW_012013133v1 24345235 40 - 25927173 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i macNem1.NW_012013133v1 I 4 C 0 s cerAty1.NW_012001672v1 3374962 40 + 4669795 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i cerAty1.NW_012001672v1 I 4 C 0 s chlSab2.chr7 134332641 40 + 135778131 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i chlSab2.chr7 I 4 C 0 s manLeu1.NW_012102221v1 2786630 40 - 2847728 AACTTGTCTCCAAAGTCGATTCTCCAAA-ACTG---TTTCAGTT i manLeu1.NW_012102221v1 I 4 C 0 s colAng1.NW_012116221v1 901010 40 + 2368649 AACTTGTCTCCAAACTCGATTCTCCAAA-ACTG---TTTCAGTT i colAng1.NW_012116221v1 I 4 C 0 s calJac3.chr3 189632982 40 - 190850796 actttgtctccaaaactgtttctccaaa-acgg---tttcaatt i calJac3.chr3 I 7 C 0 s saiBol1.JH378165 13117180 40 - 14256875 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTGCAATT i saiBol1.JH378165 M 1699 C 0 s cebCap1.NW_016107886v1 1012560 40 - 2196201 AACTTGTCTCCAAAGCCGATTCTCCAAA-ACTG---TTTCAATT i cebCap1.NW_016107886v1 I 6 C 0 s aotNan1.NW_018492112v1 3407314 40 - 5030052 AACTTGTCTCCAAAGCTGATTCTCCAAA-ACTG---TTTCAATT i aotNan1.NW_018492112v1 I 6 C 0 s micMur3.chr14 17521040 41 - 93316391 AACATGTCTCCAAAGCTGGTTCTCCAAAGACTG---TTTCAATT i micMur3.chr14 I 6 I 551 s otoGar3.GL873580 11244148 44 - 11315646 AACTTGTTTCCAAAGCTGCTTCTCCAAAGACCGACCGTTCCATT i otoGar3.GL873580 I 6 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I a score=3501757.000000 s hg38.chr4_KI270789v1_alt 129712 364 + 205944 TCCATTCCCGCATGGTAATATCAATAGA--AT----AATTGCCCATTGTCCCACAACCTGTTTAACATGGTCACACAGCGGGATTCTGACTTTGCCAAATGGCTCACTTCAATAAGCTTaatga--atgtttaaatgaatgaatgtcaatttatgaatgaGGATTACCATCTTCTCATACACGACTACTGA---ATGTATCTCAC----------------------TTTCTGAATGGGAATCATCTTCTCATATACTACCACt---------ttttttttttt-gaaacagggtttcactctgttgcccatgctagagtgcaatggcatgatcatagcccgctgcagc----cttgaactcctgggctcaagctaccctcccacctcagcctcctgagtagctaggacta s panTro5.chr4 192917126 364 + 194502333 TCCATTCCCACATGGTAATATCAATAGA--AT----AATTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCTGGAGTCTGACTTTGCCAAATGGCTCACTTCAATAAGCTTAACGA--ATGTTTAAATGAATGGATCTCAATTTATGAATGAGGATTATCATCTTCTCATACACGACTACTGA---ATGTATCTCAC----------------------TTTCTGAATGGGCATCATCTTCTCATATACTACCACt---------ttttttttttt-gaaacagggtctcactctgttgcccaggctagagtgcaatggcatgatcatagcccactgcagc----cttgaactcctgggctcaagctaccctcccacctcagcctcctgagtagctaggacta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192800800 363 + 195804263 TCCATTCCCACATGGTAATATCAATAGA--AT----AATTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCTGGATTCTGACTTTGCCAAATGGCTCACTTCAATAAGCTTAACAA--ATGTTTAAATGAATGGATCTCAATTTATGAATGAGGATTATCATCTTCTCATACACGACTACTGA---ATGTATCTCAC----------------------TTTCTGAATGGGCATCATCTTCTCATATACTACCACt---------ttttttttttt--aaacagggtctcactctgttgcccaggctagagtgcaatggcatgatcatagcccactgcagc----cttgaactcctgggctcaagctaccctcccacctcagcctcctgagtagctaggacta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838068 364 + 4876863 TCCATTCCCACATGGTAATATCAATAGA--AT----AATTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATTCTGACTTTGCCAAATGGCTCACTTCAATAAGCTTAATGA--ATGTTTAAATGAATGGATCTCAATTTATGAATGAGGATTACCATCTTCTCATACACGACTACTGA---ATGTATCTCAC----------------------TTTCTGAATGGGAATCATCTTCTCCTATATTACCACt---------ttttttttttt-gaaacagggtctcactctgttgcccaggctagagtgcaatggcatgatcatagctcactgcagc----cttgaactcctgggctcaagctaccctcccacctcagcctcctgagtagctaggacta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728468 364 + 115148730 TCCATTCCCACATGGTAATATCAATAGA--AT----AATTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATTCTGACTTTGCCAAATGGCTGACTTCAATAAGCTTAATGA--ATGTTTAAATGAATGGATCTCAATTTATGAATGAGGATTACCATCTTCTCATACACCACTACTGA---ATG-ATCTCAC----------------------TTTCTGAATGGGAATCATCTTATCATATACTACCACt---------ttttttttttttgaaacagggtctcattctgttgcccaggctagagtgcaatggcatgatcatagcccactgcagc----cttgaactcctgggctcaagctaccctcccacctcagcctcctgagtagctaggacta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189010776 366 + 190429646 TCCATCCCCACATGGTAATATCAGTAGA--AGAGCAAAGTGCCCATTGTCCCACAACCTGTTTAACATGGTCACACAGCGGGATT----CTTTGCCAAATGGCTTACTTCAATAAGCTTCATGA--ATGTTTAAATGAATGGATCTCAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACC-----------ttttttttt-gaaacagggtctcactctgttgcccaggttagagtgcgatggcatgatcatagctcactgcaaccagtctggaactcctgggctcaagctacccttccacctcagcctcctgagtagctgggacta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953558 366 + 189454096 TCCATCCCCACATGGTAATATCAGTAGA--AGAGCAAAGTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATT----CTTTGCCAAATGGCTTACTTCAATAAGCTTCATGA--ATGTTTAAATGAATGGATCTCAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACC-----------ttttttttt-gaaacagggtctcactctgttgcccaggttagagtgcaatggcatgatcatagctcactgcaaccagtctggaactcctgggttcaagctacccttccacctcagcctcctgagtagctgggacta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345275 366 - 25927173 TCCATCCCCACATGGTAATATCAGTAGA--AGAGCAAAGTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATT----CTTTGCCAAATGGCTTACTTCAATAAGCTTCATGA--ATGTTTAAATGAATGGATCTCAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ATGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACC-----------ttttttttt-gaaacagggtctcactctgttgcccaggttagagtgcgatggcatgatcatagctcactgcaaccagtctggaactcctgggctcaagctacccttccacctcagcctcctgagtagctgggacta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375002 366 + 4669795 TCCATCCCCACATGGTAATAACAGTAGA--AGAGCAAAGTGCCCATTGTCCCACAACCTATTTAACATGGTCACGCAGCGGGATT----CTTTGCCAAATGGCTTACTTCAATAAGCTTCATGA--ATGTTTAAATGAATGGATCTCAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTATCACC-----------ttttttttt-gaaacagggtcttactctgttgcccaggttagagtgcgatggcatgatcatagctcactgcaaccagtctggaactcctgggctcaagctacccttccacctcagcctcctgagtagctgggacta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134332681 370 + 135778131 TCCATCCCCACATGGTAATATCAGTACA--ATAACAAAGTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATTCTGACTTTGCCAAATGGCTTACTTCAATAAGCTTCGTGA--ATGTTTAAATGAATGGATCTTAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACC-----------ttttttttt-gaaacagggtctcactctgttgcccaggttagagtgcgatggcatgatcatagctcactgcaaccagtctggaactcctgggctcaagctacccttccacctcagcctcctgagtagctgggacta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2786670 366 - 2847728 TCCATCCCCACATGGTAATATCAGTAGA--AGAGCAAAGTGCCCATTGTCCCACAACCTGTTTAACATGGTCACGCAGCGGGATT----CTTTGCCAAATGGCTTACTTCAATAAGCTTCATGA--ATGTTTAAATGAATGGATCTCAGTTTATGAATGAGGATTACCATCCTCTCATACACGACTACTGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACC-----------ttttttttt-gaaacagggtctcactctgttgcccaggttagagtgcgatggcatgatcatagctcactgcaaccagtctggaactcctgggctcaagctacccttccacctcagcctcctgagtagctgggacta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901050 381 + 2368649 TCCATCCCCACATGGTAATATCAGTACC--ATAGCAAAGTGCCCGTTGTCCCACAATCTGTTTAACATGGTCACGCAGGGGGATTCTGACTTTGCCAAATGGCTCACTTCAATAAGCTTCGTGA--ATGTTTAAATGAATGGATCTCAATTTATGAATGAGGATTACCATCCTCTCATACGCGACTACCGA---ACGTATCTCAC----------------------TTTCTGAATGGGGATCATCTTCTCATATACTACCACCtttttttttttttttttttt-gaaacagggtctcactctgttgcccgggttagagtgcaatggcatgatcgtagctcactgcagccagtctggaactcctgggctcaagctactcttccacctcagcctcctgagtagctgggacta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633022 362 - 190850796 tccgttcccacatggtaatatcaacaga--atagcaaagtgcccattgtcccacaaccCGTTTAGCACGATCACGCATCGGAATTCTGACTTTGCCAAATGACTGACTTCAATAAGCTTGATGG--ATGTTTAAATGAATGGATCTCAATGTGTGAATGAGAACTACCATCTTCTTCTACGCTGCTACTGA---ACGTATCTCAC----------------------TTTCTGAAGG--AATCATCTTCTCATACACTGCCACT-------------CAttttt-gagacagggtctcactctgttgccccggctagagtgcagtgacgtgagcatagctcactgcagt----cttgaactcctgggctcaagcagccctcccacctcagcctcccaagtagctgggactg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117220 363 - 14256875 TCCGCTCCCACATGGTGATATCAACAGA--ATAGCGAAGTGTCCATTGTCCCACAACATGTTTAGCCTGGTCACTCATTGGAATTCTGCCTTTGCCAAATGGCTGACTTCGATAACCTTAATGG--ATGTTTAAATGAATGGATCTCAATTTGTGAATGAGAATTACCATCTTCGTCTATGCTACTGCTGA---ACCTATCTCAC----------------------TTTCTGAAAGGTAATCATCTTCTCACATACTACCACT-------------CA-tttt-gagacagggtctcactctgcagcccaggctagagggcagtgacgtgagcatagctcactgcagc----cttgatctcctgggctcaagcagccctcccacctcagcctcccgagtagctgggactg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1012600 361 - 2196201 TCCGTTCCCACATGGTAATATCAACAGA--ATAGCAACGTGCCCATTGTCCCACAAC-CGTTTAGCCTGGTCACGCGTCGGAATTCTGACTTTGCCAAATGGCTGACTTCGATAAGCTTCATGG--ATGTTTAAATGAATGGATCTC-ATTTGTGAATGAGAATTACCATCTTCTTCCACGCTGCTACTGA---ACATAGCTCAC----------------------TATCTGAAAGGGAATCATCTTCCCATATACCACCACT-------------CAttttt-gagacagggtctcactctgcagcccaggctagagtgcagtgacgtgagcctagctcactgcagc----cttgaactcctgggctcaggcagccc-ctcacctcagcctcctgagtagctgggacta i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3407354 364 - 5030052 TCCGTTCCCACATGATAATATCAACAGA--ATAGCAAAGTGCCCACTGTCCCACAACCTGTTTAGCATGGTCACGCATTGGAATTCTAACTTTGCCAAATGGCTGACTTCAATAAGCTTAATGG--ATGTTTAAATGAATGAATCTCAATTTGTGAATGAGAATTACCATCTTCTTCTACACTACTACTGA---ACGTATCTCAC----------------------TTTCTGAAAGGGAATCATCTTCTTATGTACTACCATT-------------CAttttt-gagacagggtctcactctgtagccccggctagagtgcagtgatgtgagcatagctcactgcagc----cttgagctcctgggctcaagcagccctcccaccttagcctcccgagtagctgggacta i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11244192 388 - 11315646 TAATTTCCTACA---TAATGCCAATTGATGATACCAAAGTGTCCATCTTCCTACATTCTGTTCAACATTGTCATGTGGCAAAATTACC-CTTTGGCAAATGACTCAATTAAATAAGC-TAATCACCATGTTTAAATTACCATGCTCCATTTAATTGATAGGAAGTCACATCTTGGCATATTCTATTTGTAAAGTATATGTCTTGCCTGACTTTGCCTTTTTCCCAGGTTTATAATTGACTGTT-TTTTCTTATTGGttttcttt---------tttttcttttt-gagatggagcctcaagctgtccccctgggtagagtgccatggcat---cacagctcacagcaac----ctccaactcctgggctcaagcaagtctcttgcctcagcctcccaagtagctgggacta i otoGar3.GL873580 C 0 M 928 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I a score=333214.000000 s hg38.chr4_KI270789v1_alt 130076 39 + 205944 caggtgtgaaccaccatgc-------ccagctaatc----gtg------------tgtttgt s panTro5.chr4 192917490 39 + 194502333 caggtgtgaaccaccatgc-------ccagctaatc----gtg------------tgtttgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801163 39 + 195804263 caggtgtgaaccaccatgc-------ccagctaatc----gtg------------tgtttgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838432 39 + 4876863 caggtgtgaaccaccatgc-------ccagctaatc----gtg------------tgtttgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728832 39 + 115148730 caggtgtgagccaccatgc-------ccagctaatc----atg------------tgttcgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011142 39 + 190429646 caggtatgagccgccacac-------ccagctaatc----gtg------------tgtttgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953924 39 + 189454096 caggtatgagccgccacac-------ccagctaatc----gtg------------tgtttgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345641 39 - 25927173 caggtatgagccgccacac-------ccagctaatc----gtg------------tgtttgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375368 43 + 4669795 caggtatgagccgccacac-------ccagctaatcgtgtgtg------------tgtttgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333051 39 + 135778131 taggtatgagccgccacac-------ccagctaatt----gtg------------tgtgtgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787036 51 - 2847728 caggtatgagccgccacac-------ccagctaatc----gtgtgtttgtttgtttgtttgt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901431 46 + 2368649 caggtgtgagccgccacgcccagctaccagctaatt----gtg------------tgttcgt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633384 38 - 190850796 ca-gtgtgagccaccatgc-------cccactaact----gtg------------tgtttgt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117583 39 - 14256875 caggtgtgagccaccatgc-------ccctctaact----gtg------------tgtttgt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1012961 39 - 2196201 caggtgtgaaccaccatgc-------cccgctaact----gtg------------tgtttgt i cebCap1.NW_016107886v1 C 0 I 129 s aotNan1.NW_018492112v1 3407718 39 - 5030052 caggtgtgagccaccatgc-------cccgctaact----gtg------------tgtctgt i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=49255.000000 s hg38.chr4_KI270789v1_alt 130115 6 + 205944 ttgttt s panTro5.chr4 192917529 6 + 194502333 ttgttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801202 6 + 195804263 ttgttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838471 6 + 4876863 ttgttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728871 6 + 115148730 ttgttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011181 6 + 190429646 ttgttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953963 6 + 189454096 ttgttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345680 6 - 25927173 ttgttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375411 6 + 4669795 ttgttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333090 6 + 135778131 gtgttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787087 6 - 2847728 ttgttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901477 6 + 2368649 gtgttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633422 6 - 190850796 ctgttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117622 6 - 14256875 ctgttt i saiBol1.JH378165 C 0 I 26 s aotNan1.NW_018492112v1 3407757 6 - 5030052 ctgttt i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=24024.000000 s hg38.chr4_KI270789v1_alt 130121 4 + 205944 gttt s panTro5.chr4 192917535 4 + 194502333 gttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801208 4 + 195804263 gttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838477 4 + 4876863 gttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728877 4 + 115148730 gttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011187 4 + 190429646 gttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953969 4 + 189454096 gttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345686 4 - 25927173 gttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375417 4 + 4669795 gttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333096 4 + 135778131 gttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787093 4 - 2847728 gttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901483 4 + 2368649 gttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633428 1 - 190850796 g--- i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3407763 4 - 5030052 gttt i aotNan1.NW_018492112v1 C 0 I 26 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13117628 26 - 14256875 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=49094.000000 s hg38.chr4_KI270789v1_alt 130125 21 + 205944 gtttgtttgttttagaga-aca s panTro5.chr4 192917539 13 + 194502333 gttt--------tagaga-aca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801212 13 + 195804263 gttt--------tagaga-aca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838481 9 + 4876863 ------------tagaga-aca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728881 13 + 115148730 gttt--------gagaga-aca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011191 9 + 190429646 ------------tagaga-aca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953973 9 + 189454096 ------------tagaga-aca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345690 9 - 25927173 ------------tagaga-aca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375421 9 + 4669795 ------------tagaga-aca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333100 9 + 135778131 ------------tagaga-aca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787097 9 - 2847728 ------------tagaga-aca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901487 9 + 2368649 ------------tagaga-aca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633429 12 - 190850796 --tt--------tagagagaca i calJac3.chr3 C 0 I 17 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3407767 26 - 5030052 I e saiBol1.JH378165 13117628 26 - 14256875 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=821215.000000 s hg38.chr4_KI270789v1_alt 130146 89 + 205944 ccaggctggtctcgaactcttgggctcaagtgatcctcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA s panTro5.chr4 192917552 89 + 194502333 ccaggctggtctcgaactcttgggctcaagtgatcctcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801225 89 + 195804263 ccaggctggtctcgaactcttgggctcaagtgatcctcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838490 89 + 4876863 ccaggctggtctcgaactcttgggctcaagtgatcctcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728894 89 + 115148730 ccaggctggtcttgaactctcgggctcaagtgatcctcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011200 89 + 190429646 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187953982 89 + 189454096 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345699 89 - 25927173 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375430 89 + 4669795 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333109 89 + 135778131 ccagactggtctcaaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787106 89 - 2847728 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcgggcatgagccactgtgcccA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901496 89 + 2368649 ccagactggtctcgaactcttgggctcaagtgatcatcctgcctcagcttcccaaagtgctgggaatcaggcatgagccactgtgcccA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633458 89 - 190850796 ccaggctggtttcgacctcttgggctcaattgatcctccttccccagctttccaaagtactaagaatcaggcatgggccactgtgccca i calJac3.chr3 I 17 C 0 s saiBol1.JH378165 13117654 89 - 14256875 ccaggctggtctcgacctcttgggctcaagtgatcctccttccccagctttccaaagtactaagaatcaggcatgaaccactgtgccca i saiBol1.JH378165 I 26 C 0 s aotNan1.NW_018492112v1 3407793 89 - 5030052 ccaggctggtctcgacctcttgggctcaagtgatcctccttccccagctttccaaagtactaagaatcaggcatgagccactgtgccca i aotNan1.NW_018492112v1 I 26 I 5 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=14479.000000 s hg38.chr4_KI270789v1_alt 130235 3 + 205944 CCC s panTro5.chr4 192917641 3 + 194502333 CCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801314 3 + 195804263 CCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838579 3 + 4876863 CCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728983 3 + 115148730 TCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011289 3 + 190429646 TCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954071 3 + 189454096 TCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345788 3 - 25927173 TCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375519 3 + 4669795 TCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333198 3 + 135778131 TCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787195 3 - 2847728 TCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901585 3 + 2368649 TCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633547 3 - 190850796 gcc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117743 3 - 14256875 gcT i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3407882 5 - 5030052 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=1667618.000000 s hg38.chr4_KI270789v1_alt 130238 322 + 205944 TTATACTACCt--tttttttttttttttttttttttgagacggagtctcactc--------------------tgttacccaggctggagtgcagtggtgcaatctcttctgactgcaacctccacctcctgggctcaagcgattctcctgcct-agcctcccgagtagcctggattaagggcgtgcaccaccacgcctggctaatttttgtattttttt-atagtagagacggggtttcaccatgttggccaggatagttttgaacacctgacctcaaatgatctgcccgcctcggcttcccaaagtgctgggattataggtgtgagccagtgtgcccagccCCC s panTro5.chr4 192917644 321 + 194502333 TTATACTAC-t--tttttttttttttttttttttttgagacggagtcttgctc--------------------tgttacccaggctggagtgcagtggtgcaatctcttctgactgcaacctccacctcccgggctcaagcgattctcctgcct-agcctcccgagtagcctggattatgggcgtgcaccaccacgcctggctaatttttgtattttttt-atagtagagacggggtttcaccatgttggccaggatagttttgaacacctgacctcaaatgatctgcccgcctcggcttcccaaagtgctgggattataggtgtgagccagtgcgcccggccCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801317 307 + 195804263 TTATACTAC-t--ttttttt---------------------------------nnnnnnnnnnnnnnnnnnnntgttacccaggctggagtgcagtggtgcaatctcttctgactgcaacctccacctcccgggctcaagcgattctcctgcct-agcctcccgagtagcctggattatgggcgtgcaccaccacgcctggctaatttttgtg-tttttt-atagtagagacggggtttcaccatgttggccaggatagttttgaacacctgacctcaaatgatctgcccgcctcggcttcccaaagtgctgggattataggtgtgagccagtgcgcccggccCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838582 314 + 4876863 TTATACTAC-t--ttttttc------ttttttttttgagacggagtctcgctc--------------------tgttaccaaggctggagtgcagtggtgcaatctcttctgactgcaacctccacctcccgggctcaagcgattctcctgcct-agcctcccgagtagcctggatta-gggcgtgcaccaccacgcctggctaatttttgtatttcttt-atagtagagatggggtttcaccatgttggccaggatagttttgaacacctgacctcaaatgatctgcccgcctcggcttcccaaagtgctgggattataggtgtgaaccagtgcgcccggccCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112728986 307 + 115148730 TTATACTAC-C--ttttttt------ttttttttttgagacggggtcttgctc--------------------tgttacccagactggagttcagtggtgcaatctcttctgactgcaacctccac--------ctcaagtgattctcctgcct-cgcctcccgagtagcctggattatgggcatgcaccaccacgcctggctaatttttgtattttttt-atagtagagacggggtttcaccatgttggccaatatagttttgaacacctgacctcaaatgatctgcccaccttggcttcccaaagtgctgggattataggtgtgagccactgcgcccagccCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011292 321 + 190429646 TTACACTAC-A---ttttttttttttttccttttttgagatggagtctcgctt--------------------tgttacccaggctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccggggctcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgagcatcaccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccgtgttggccaggatagttttgaacacctgacttcaaatgatctgcccacctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954074 322 + 189454096 TTACACTAC-A--tttttttttttttttccttttttgagatggagtctcgctt--------------------tgttacccaggctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccggggctcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgagcatcaccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccgtgttggccaggatagttttgaacacctgacttcaaatgatctgcccgcctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24345791 324 - 25927173 TTACACTAC-Atttttttttttttttttttttttttgagatggagtctcgctt--------------------tgttacccaggctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccggggctcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgagcatcaccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccgtgttggccaggatagttttgaacacctgacttcaaatgatctgcccgcctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375522 321 + 4669795 TTACACTAC-A---ttttttttttttttccttttttgagatggagtctcactt--------------------tgttacccaggctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccggggctcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgtgcatcaccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccgtgttggccaggatagttttgaacacctgacttcaaatgatctgcccacctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333201 323 + 135778131 TTACACTAC-A-ttttttttttttttttccttttttgagatggagtctcactt--------------------tgttacccacgctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccggggttcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgtgcatcgccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccgtgttggccaggatagttttgaacacctgacttcaaatgatctgcccgcctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtgtggccCCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787198 321 - 2847728 TTACACTAC-A----tttttttttttttccttttttgagatggagtctcgctt--------------------tgttacccaggctggagtgcagtggtgcaatctctgctcactgcaacgtccatctccagggctcaagtgattctcctgcctcagcctcccgagtaggctggattatgggcgtgcatcaccatgcctggctaatttttgtatttttttaatagtagagatggggtctcactgtgttggccaggatagttttgaacacctaacttcaaatgatctgcccgcctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901588 321 + 2368649 TTACACTAC-A---ttttttttttttttccttgtttgagatggagtctcactc--------------------tgttacccaggctggcgtgcagtggcgcaatctctgctcactgcaacctccatctccggggctcaagcgattctcctgcctcagcctcccgagtagcctggattatgggcgtgcatcaccatgcctggctaatttttgtattttttt-atagtagagatggggtctcaccatgttggccaggatagttttgaacacctgacttcaaatgatctgcccgcctcagcttcccaaagtgctgggattgcagatgtgagccaccgcgtctggccCCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189633550 0 - 190850796 C e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3407882 5 - 5030052 I e saiBol1.JH378165 13117746 0 - 14256875 C e otoGar3.GL873580 11244580 928 - 11315646 M a score=-277.000000 s hg38.chr4_KI270789v1_alt 130560 2 + 205944 --TT s panTro5.chr4 192917965 2 + 194502333 --TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801624 2 + 195804263 --TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838896 2 + 4876863 --TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112729293 2 + 115148730 --TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011613 2 + 190429646 --TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954396 2 + 189454096 --TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24346115 2 - 25927173 --TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375843 2 + 4669795 --TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333524 2 + 135778131 --TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787519 2 - 2847728 --TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901909 2 + 2368649 --TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633550 2 - 190850796 GA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117746 2 - 14256875 GA-- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3407882 5 - 5030052 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=16512.000000 s hg38.chr4_KI270789v1_alt 130562 3 + 205944 ATA s panTro5.chr4 192917967 3 + 194502333 TTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801626 3 + 195804263 TTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838898 3 + 4876863 ATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112729295 3 + 115148730 ATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011615 3 + 190429646 GTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954398 3 + 189454096 GTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24346117 3 - 25927173 GTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375845 3 + 4669795 GTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333526 3 + 135778131 GTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787521 3 - 2847728 GTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901911 3 + 2368649 ATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633552 3 - 190850796 ATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117748 3 - 14256875 ATA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3407887 3 - 5030052 ATA i aotNan1.NW_018492112v1 I 5 C 0 e cebCap1.NW_016107886v1 1013000 129 - 2196201 I e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=4276264.000000 s hg38.chr4_KI270789v1_alt 130565 505 + 205944 CTACTTTTATATGTCTTGCCTGG-TTTTTTCTTCTGACCAGATTTATAATTAAATAACTGGTTT-TTTTTCTTACTGACTTTCATGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATTTATGTTGTACATATTTACTCTAATTTATCTCTCTTAAAATGTTTTGTTTTTTggccagacgtggtgggtcatgcctgtaatcccagcaatttgggat----------------cacctgaggtcaggagttcaagaccagcctggccaacatggcaaaaccccatctctgctaaaaaca--aaaattagctgggtg---taatggtgcgcacctgtaatcccagctactcgggcggctgaggcaga-gcaatcgtttgaacccgggaggtggaggttgcagtgagctgagacctcaccactgcactccagcctg-ggtgacagagcaagaccctgtctcaa-------aaaaaaa---------aaaaGTTTTATTT-TTTA-------ATATATACATACTTTAGTGGGACATAAGAATGATTTAGGG s panTro5.chr4 192917970 512 + 194502333 CTACTTTTATATGTCTTGCCTGG-TTTTTTCTTCTAACCAGATTTATAATTAAATAACTGGTTT-GTTTTCTTACTGACTTTCATGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTTTTggccagacatggtgggtcatgcctgtaatcccagcaatttgggat----------------cacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctgctaaaaaca--aaaattagccgggtg---taatggtgcgcgcctgtaatcccagctactcgggtggctgaggcaga-acaatcgtttgaacccgggaggtggaggttgcagtgagctgagacctcaccactgcactccagcctg-ggtgacagagcaagaccctgtctcaa-------aaaaaaa--caaaaaaagaaGTTTTATTT-TTTA-------ATATATAGATACTTTAGTGGGACATAGGAATGATTTAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192801629 509 + 195804263 CTACTTTTATATGTCTTGCCTGG-TTTTTTCTTCTAACCAGATTTATAATTAAATAACTGGTTT-GTTTTCTTACTGACTTTCATGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTTTTggccagacatggtgggtcatgcctgtaatcccagcaatttgggat----------------cacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctgctaaaaaca--aaaattagccgggtg---taatggtgcgcgcctgtaatcccagctactcgggtggctgaggcaga-acaatcgtttgaacccgggaggtggaggttgcagtgagctgagacctcaccactgcactccagcctg-ggtgacagagcaagaccctgtctcaa-------aaaaaac----aaaaaagaaGTTTTA-TT-TTTA-------ATATATAGATACTTTAGTGGGACATAGGAATGATTTAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3838901 514 + 4876863 CTACTTTTATATGTCTTGCCTGG-TTTTTTCTTCTGACCAGATTTATAATTAAATAACTGGTTT-GTTTTCTTACTGACTTTCATGAAATTTTAATTTATCAGGAAGTTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTTTTggccagacgtggtgggtcatgcctgtaatcccagcaatttgggat----------------cacctgaggtcaggagttcaagaccagcctggccaacatggggaaaccccatctctgctaaaaaca--aaaattagccgggtg---taatggtgcgcgcctgtaatcccagctactcgggcggctgaagcaga-acaatcgtttgaacccgggaggtggaggtggcagtgagctgagacctcaccactgcattccagcctg-ggtgacagagcaagaccctgtctcca-------aaaaaaaaaaaaaaaaaGGAGTTTTATTT-TTTA-------ATATATAGATACTTTAGTGGGACATAGGAATGATTTAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112729298 508 + 115148730 CTACTTT--TATGTCTTGCCTGG-TTTTTTCTTCTGACCAGATTTATAATTAAATAACTGTTTTCTTTTTCTTACTGACTTTCATGACATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTGTAATTTCTCTCTTTTAAAATGTTTTGTTTTTTggccagatgtggtggcttatgcctgtaatcccagcaatttgggat----------------cacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaaca--aaaattagccgggcgtcttaatggtgcgcgcctgtaatcccagctactcgggcggctgaggcaga-agaatcgttcgaacccgggaggtggaggttgcagtgagccgagacctcaccactgcaccccagcctg-ggtgacagagcaagatcctgtctcaa-------aaaaaaa--------aaaaaGTTTTATTT-TTTA-------ATATATAGATATTTTAGTGTAACACAGGAATGATTTAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189011618 484 + 190429646 CTACCTTTATATGTCTTGCCTGA--TTTTTCTTCTGACCAGATTTATAATTAAATAAC-------C-TTTTTTCCTTACTTTCAGGAAATTTT-TTTTATCAC-AAATTAGTTCTGTTGTATATATATGTTGTACATATTTACTC-----TTCTCTTTTAAAAATGTTTTGTTTCTT-Accagacgtggtggtcta-gcctgtaatcccag-agtttgggag---------------ccacctgaggtcaggagttcaagacca-cctgg-caacatggtgaaaccccgtctctacaaaaaaca--aaaactagccaggtg---taat-gtgcgtacctttaatcccagctactcaggaggctgaggcagagggaattgtttgaacccgggaggtggaggttgcagtgagcggagaccgcaccactgcactccagcctgtggtgacagagcaagagcatgtcttgg-------aaaaaaa-----aaaaaaaaGTTTTTTTTAATTT-------ATATTTAGATACTTCAGTGGGACGTAGGAATG-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954401 489 + 189454096 CTGCCTTTATATGTCTTGCCTGA-TTTTTTCTTCTGACCAGATTTATAATTAAATAAC-------CTTTTTTTCCTTACTTTCAGGAAATTTTAATTTATCATGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTC-----TATCTCTTTTAAAATGTTTTGTTTCTTCAccagacgtggtggctcatgcctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagacca-cctggccaacatggtgaaaccccgtctctacaaaaaaca--aaaactagccaggtg---taatggtgcgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggaggtggaggttgcagtgagcggagaccacaccactgcactccagcctg-ggtgacagagcaagagcctgtctcgg-------aaaaaaa-----aaaaaaaaGTTTTATTT-TTTA-------ATATATAGATACTTCAGTGGGACGTAGGAATG-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24346120 489 - 25927173 CTGCCTTTATATGTCTTGCCTGA-TTTTTTCTTCTGACCAGATTTATAATTAAATAAC-------CTTTTTTTCCTTACTTTCAGGAAATTTTAATTTATCACGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTC-----TATATCTTTTAAAATGTTTTGTTTCTTCAccagacgtggtggctcatgcctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagacca-cctggccaacatggtgaaaccccgtctctacaaaaaaca--aaaactagccaggtg---taatggtgcgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggaggtggaggttgcagtgagcggagaccacaccactgcactccagcctg-ggtgacagagcaagagcctgtctcgg-------aaaaaaa-----aaaaaaaaGTTTTATTT-TTTA-------ATATATAGATACTTCAGTGGGACGTAGGAATG-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3375848 494 + 4669795 CTACCTTTATATGTCTTGCCTGA-TTTTTTCTTCTGACCAGATTTATAATTAAATAAC-------CTTTTTTCCCTTACTTTCAGGAAATTTTAATTTATCACGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTCTTCAccagacgcggcggctcatgcctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagacca-cctggccaacatggtgaaaccccatctctacaaaaaaca--aaaactagccaggtg---taatggtgcgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggaggtggaggttgcagtgagtggagaccgcaccactgctctccagcctg-ggtgacagaacaagagcctgtctcaa-------aaaaaaa-----aaaaaaaaGTTTTATTT-TTTA-------ATATATAGATACTTCAGTGGGACGTAGGAATG-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134333529 501 + 135778131 CTACCTTTATATGTCTTGCCTGA-TTTGTTCTTCTGACCAGATTTATAATTAAATAAC-------CTTGTTTTCCTTACTTTCAGGAAATTTTAATTTATCACGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTCTTCAccagacgcgctggctcatgcctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagacca-cctggccaacatggtgaaatcccgtctctacaaaaaaca--aaaactagccaggtg---taatggtgtgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggaggtggaggttgcagtgagcggagaccgcaccactgcactccagcctg-ggtgacagagcaagagcctgtctcggaaaaaaaaaaaaaa-----aaaaaaaaGTTTTATTT-TTTA-------ATATATAGATACTTCAGTGGGACGTAGGAATG-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2787524 493 - 2847728 CTACCTTTATATGTCTTGCCTGA-TTTTTTCTTCTGACCAGATTTATAATTAAATAAC-------CTTTTTTTCCTTACTTTCAGGAAATTTTAATTTATCACGAAATTAGTTCTGTTGTTAATATATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTCTTCAccagacgcggtggctcatgcctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagacca-cctggccaacatggtgaaaccccgtctctacaaaaaaca--aaaactagccaggtg---taatggtgcgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggaggtggaggttgcagtgagcggagaccacaccactgtactccagcctg-ggtgacagaacaagagcctgtctcgg--------aaaaaa-----aaaaaaaaGTTTTATTT-TTTA-------ATATATAGATACTTCAGTGGGACGTAGGAATG-------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 901914 502 + 2368649 CTACCTTTATATGTCTTGCCTGATTTTTTTCTTCTGATCAGATTTATAATTAAATAAT-------CTTTTTTTTCTTACTTTCAGGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATGTATGTTGTACATATTTACTCTAATTTATCTCTTTTAAAATGTTTTGTTTCTTCAccagacgtggtggctcacacctgtaatcccagcagtttgggag----------------cacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctacaaaaaaca--aaaattaaccaggcg---taatggtgcgtacctgtaatcccagctactcaggaggctgaggcaga-ggaattgtttgaacccgggagatggaggttgcagtgagccgagaccgcaccactgcattccagcctg-ggtgacagagcaagatcctgtcttga--------aaaaaa-----aaaaaaaaGTTTTATTT-TTTATTTTTTGATATATAGATACTTTAGTGGGACATAGGAATG-------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189633555 507 - 190850796 CTACTTTTATATATCTTGCTTAG-TTTTGCCTTCTGACCAGATTTATAATTAAATAAC--------------TGCTGACTTTCACGAAATTTTAATTTATCAGGAAACTAGTTCTGTTTTTAATGTATGTTGTACATATTTGCTGTAATTTATCTGTCTTTAAATGCTTTGTTTTTTggccgggtgcagtggctcatgcctgtaatcccagcactttgggatgctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctggaaaacatggtgaatccccgtctctactaaaaatatgaaaattagccgagcg---tagtggtatatgcctgtagtcccagctccttgggaggctgaggcaga-agaattgtttgaacctgggaggcagaggttgcagtgagctgagattgcgtcactgcactccagcctg-ggtgacagac--agaggctgtctcaa-------aaaa----------aaaaaaGTTTTGTTT-ATTA-------ATATATAGACACTTCAGTGGGATGTAGGAATGATCCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13117751 508 - 14256875 CTACTTTTATATACCTTGCTTGG-TTTTGCCTTCTGACCAGGTTTATAATTAAATAAC--------------TGCTGACTTTCATGAAGTTTTAATTTATCAGGAAATTAGTTCTGTTGTTCATGTATGTTGTACATATTTGCTCTAATTTATCTGTCTCAAAATGCTTTGTTTCTTggccgggtacagtggctcatgcctgtaatctcagcactttgggaggccgaggcaggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatatgaaaattagtcaagtg---tagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaga-agaattctttgaacctgggaggcaaagtttgcggtgagctgatattgagtcactgcactccagcctg-ggtgacagag--acaggctgtctcaa-------aaaa---------taaaaaaGTTTTGTTT-TTTA-------ATATATAGATACTTCAGTGGGATGTAGGAATGATGTAGGG i saiBol1.JH378165 C 0 M 1328 s cebCap1.NW_016107886v1 1013129 514 - 2196201 CTACTTTTATATATCTTGCTTGG-TTTTGCCTTCTGACCAGATTTATAATTAAATAAC--------------TGCTGACTTTCATGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATGTATGTTGTACATATTTGCTCTAATTTATCTGTCTTAAAATGCTTTGTTTTTTggccgggtgcagtggctcatgtctgtaatcccagcactttgagaggctgaggcaggcggatcacctgaggtcaggagtttgagaccagcctagccaacatggtgaaaccccatctctactaaaaatatgaaaattagctgagcg---tagtggtgaatgcctgtaatcccagctacttgggaggctgaggcaga-agaattgtgtgaacctgggaggcagaggttgcagtgagctgagattgcatcactgccctccagcctt-ggtgagagag--tgaggctgtctcaa-------aaaaaaa---aaaaaaaaaaGTTTCGTTT-TTAA-------ATATATAGATACTTCAGTGGGATGTAGGAATGATTTAGGG i cebCap1.NW_016107886v1 I 129 C 0 s aotNan1.NW_018492112v1 3407890 509 - 5030052 CTACTTTTATATATCTTGCTTGG-TTTTGCCTTCTGACCAGATATATAATTAAATAAC--------------TGCTGACTTTCATGAAATTTTAATTTATCAGGAAATTAGTTCTGTTGTTAATGTATGTTGTACATATTTGCTCTAATTTATCGGTCTTAAAATGCTTTGTTTTTTggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactgaaaatatgaaaattagccgagcg---tagtggtgcatgcctgtaatcccagctacttgggaggctgaggcaga-agaattgtttgaacctgggaggcagaggttgcagtgagctgagattgtgtcactgcgctccagcccg-ggtgacagag--agaggctgtctcaa-------aaaa--------aaaaaaaaGTTTTGTTT-TTTA-------ATATATAGATACTTCAGTGGGATGTAGGAATGATTTACGG i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e otoGar3.GL873580 11244580 928 - 11315646 M a score=2403654.000000 s hg38.chr4_KI270789v1_alt 131070 317 + 205944 CACTTCAATTTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaagacgtgcaggtttgttacaaaataggtatacatgtgccatggtggtatgctgcactcatcaacccgtcatctacattaggtatttctcctaatgctatccctcccctagtcccccagcttctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccatgtgttctcattgttcagctcccacttatgagt--gaatatgtggtgtttggttttctgttcctgtgttagtgtgctgagaatgatggtgtcc s panTro5.chr4 192918482 314 + 194502333 CACTTCAATTTGGGTCTAttttttcattcttttattatactttaagttctgggatacatgtgcaagacgtgcaggtttgttacaaa-taggtatacatgtgccatggtggtatgctgcactcatcaacccgtcatctacattaggtatttctcctaatgctctccgtcccctagtcccccagcttctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccatgtgttctcattgttcagctcccacttatgagt--gaatatgtggt--ttggttttctgttcctgtgttagtttgctgagaatgatggggtcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802138 314 + 195804263 CACTTCAATTTGGGTCTAttttttcattcttttattatactttaagttctgggatacatgtgcaagacgtgcaggtttgttacaaa-taggtatacatgtgccatggtggtatgctgcactcatcaacccgtcatctacattaggtatttctcctaatgctctccgtcccctagtcccccagcttctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccatgtgttctcattgttcagctcccacttatgagt--gaatatgtggt--ttggttttctgttcctgtgttagtttgctgagaatgatggggtcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3839415 319 + 4876863 CACTTCAATTTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaagatgtgcaggtttgttacaaaataggtatacatgtgacatggtggtttcctgcactcatcaacctgtcatctacattaggtatttctcccagtgctctccctcccctagtcccccagcttctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccatgtgttctcattgttcaactcccacttgtgagtgagaacatgcggtgtttggttttctgttcctgtgttagtttgctgagaatgatggtttcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112729806 314 + 115148730 CACTTCAATTTGGGTCTAttttttc-----tttattatactttaagttctgggatacatgtgcaaaatgtgcaggtttgttacaaaataggtatacacatgccatggtggtttgctgcactcatcagcccgtcatctacattaggtatttctcctaatgctatccctcccctagtcccccaacttctgacaggccccagtgtgcaatgttcccctcc-ctgtgtccatgtgttctcattgttcaactcccagttatgagtgagaacaggcgatgtttggttttctgttcctgtgttagtttgctgagaatgatagtgtcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012102 310 + 190429646 -------ATCTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaacgtgcagatttgttacaaaataggtatacatgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctcccctag-cccccaccttctgacaggccccagtgtgggatgttcccctct-ctgtgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgtggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187954890 310 + 189454096 -------ATCTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaacgtgcagatttgttacaaaataggtatacacgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctccccttgccccccacc-cctgacaggccccagtgtgggatgttcccctct-ctgtgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgtggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24346609 311 - 25927173 -------ATCTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaacatgcagatttgttacaaaataggtatacacgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctcccctagccccccaccttctgacaggccccagtgtgggatgttcccctct-ctgtgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgtggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376342 307 + 4669795 -------ATCTGGGTCTAttt----tttcttttattatactttaagttctgggatacatgtgcaaaacgtgcagatttgttacaaaataggtatacacgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctcccctagccccccactttctgacaggccccagtgtgggatgttcccctct-ctgtgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgtggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334030 311 + 135778131 -------ATCTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaacgtgcaggtttgttacaaaataggtatacacgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctcccctagccccccaccttctgacaggccccagtgtgggatgttcccctct-ctatgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgcggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788017 311 - 2847728 -------ATCTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaatgtgcagatttgttacaaaataggtatacacgtaccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgttgtccctcccctagccccccactttctgacgggccccagtgtgggatgttcccctct-ctgtgtccatgtg-tctccttgttcaactcccacttatgagtgagaacatgtggtgtgtggttttctgttcttgtattagtttgctgagaatgatggtttcc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 902416 312 + 2368649 -------ATTTGGGTCTATTttttctttcttttattatactttaagttctgggatacatgtgcaaaacgtgcaggtttgttacaaaataggtatacacataccatggtggtttgctgcacccatcaacccatcatctacattaggtatttctcctaatgctgtccctcccctagccccccaccttctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccacgtgttctcattgtccagctcccacttatgagtgagaacatgtggtgtgtggttgtctgttcttgtgttagtttgctgagaatgatcgtttcc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634062 294 - 190850796 CGCTTCAATTTGGG---ACtttcttttaaaat--------tttaagttctgggatacctgtggagagcatgcaggtttgtcaca---taggtgtacacgtaccatgctggtttgctgcacccagca--------cctaca-tagatatttctcctaatgctctccctcctc-agccccccacc-cctgacaggccccagtgtgtgatgttcccctcc-ctatgtccatgtgttttcattgttcagctcccacttgtgggtgagaacatgtggcgtttggttttctgttcctgtgtcagtttgctgacaatgatggtttcc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1013643 304 - 2196201 CACTTCAATTTGGG---ACTTTTAAAAAAAAT--ttataatttaagttctgggatacctgtggagagcatgcaggtgtgtcaca---taggtgtacctgcagcgtgctggtttgctgcacccatcaacctgccctctacattaggtacttctcctaatgccccccc-------aaccccatcc-cccaacaggccccgatgtgtgatgttcccctccgctgtgcccaaatgtcctcattgttcaactcccacttatgagtgagaacatgtggtgtttggttttctgttcctgtgttagttttctgagaatgatgctttcc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3408399 311 - 5030052 CACTTCAATTTGGG---ACTttttttttttttaattataatttaagttctgggatacctgtggagagcatgcaggtttgtcaca---taggtgtacatgtaccatgctggtttgctgcacccatcaacccatcacctaca-taggtatttctcctaatgctctccctcccctagccccccacc-cctgacaggccccagtgtgtgatgttcccctcc-ctgtgtccatgtgttctcgttgttcaactcccacttgtgggtgagaacatgtggtgtttggttttctgttcttgtgacagtttgctgagaatgatggtttcc i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M e otoGar3.GL873580 11244580 928 - 11315646 M a score=1139833.000000 s hg38.chr4_KI270789v1_alt 131387 128 + 205944 agcttcatccatgtccctgcagaggacatgaactcatcct-tttgtatggctgcacagtattccctggtgtatatgtgccacgttttcttgatccagtctgtcagtgatgggcaCAGCCACTTGGGCCT s panTro5.chr4 192918796 128 + 194502333 agcttcatccatgtccctgcaaaggacatgaactcatcct-tttgtatggctgcatagtattccctggtgtatatgtgccacattttctttatcctgtctatcattgatgggcaCAGCCACTTGGGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802452 128 + 195804263 agcttcatccatgtccctgcaaaggacatgaactcatcct-tttgtatggctgcatagtattccctggtgtatatgtgccacattttctttatcctgtctatcattgatgggcaCAGCCACTTGGGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3839734 128 + 4876863 agcttcatccatgtccctgcagaggacatgaactcatcct-tttgtatggctgcatagtattccctggtgtatatgtgccacattttctttatccagtctgtcagtgatgggcaCAGCCACTTGGGCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730120 124 + 115148730 agcttcatccatgtccctgcaaaggacatgaactcatcct-tttgtatggctgcatagcattccctggtgtacatgtgccacgtttt----atccagtctattagtgatgggcaCAGTGACTTGGGTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012412 128 + 190429646 agcttcatccatgtcccttcaaaggacatgaactcatcct-ttttgatggctgcatagtattccgtggtgtacatgtgccacattttcttcatccagtctgtcagtgatgggcacagcgacttgggttg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955200 128 + 189454096 agcttcatccatgtcccttcaaaggacatgaactcatcct-ttttgatggctgcatagtattccgtggtgtacatgtgccacactttcttcatccagtctgtcactgatgggcacagcgacttgggtcg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24346920 128 - 25927173 agcttcatccatgtcccttcaaaggacatgaactcatcct-ttttgatggctgcatagtattcagtggtgtacatgtgccacattttcttcatccagtctgtcagtgatgggcacagcgacttgggtcg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376649 128 + 4669795 agcttcatccgtgtcccttcaaaggacaggaactcatcct-ttttgatggctgcatagtattccgtggtgtacatgtgccacattttcttcatccagtctgtcagtgatgggcacagtgacttgggtcg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334341 128 + 135778131 agcttcatccatgtcccttcaaaggacatgaactcatcct-ttttgatggctgcatagtattccatggtgtacatgtgccacattttcttcatccagtctgtcagtgatgggcacagcaacttgggtcg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788328 128 - 2847728 agcttcatccatgtcccttcaaaggacatgaactcatcct-ttttgatggctgcatagtattctgtggtgtacatgtgccacattttcttcatccagtctgtcagtgatgggcacagcgacttgggtcg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 902728 128 + 2368649 agtttcatccatgtcccttcaaaggacatgaactcatcct-tttttatggctgcatagtattccgtggtgtatatgtgccacattttcttcatccagtctgtcagtgatgggcaCAGCGACTTCGATCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634356 128 - 190850796 agcttcatccatgtccctgcaaagaacatgaactcatcct-tttttatggctgcatagtattccatagtgtacatgtgccacattttctttatccagtctgtcattgacaggcatAGTGACTTGGACCT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1013947 128 - 2196201 agcttcatccatgtccctgcaaaggatgtgaactcaacct-tctttatggctgcatagtattccatggtgtacatgtggcacattttctttatccagtctatcattgataggcatagtgacttgggtct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3408710 128 - 5030052 agcttcatccatgaccctgcaaaggacatgaactcatact-tttttgtggctgcatagtattccacggtgtacatgtgccacattttctttatccagtctatcattgatgggcatagtgacttgggtct i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11245508 123 - 11315646 agctccatccatgtaaacataaaagagataaggtcttcatatttttaaggctgcataatattccatggtgtacatataccacaatttattaattcattcatgggtcagtgggc------acttgggctt i otoGar3.GL873580 M 928 I 80 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=978031.000000 s hg38.chr4_KI270789v1_alt 131515 115 + 205944 GTTTTCTAGGGACACGTCTCTCTGCAGATGGTTACAGCCTCCTTCGGTTTGCGCAGATCGCCCTCAGACGAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGTC---GT s panTro5.chr4 192918924 115 + 194502333 GTTTTCTAGGGACACGTCTCTCTGCAGATGGTTACAGCCTCCTTCGGTTTGCGCAGATCACCCTCAGACGAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGCC---TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802580 115 + 195804263 GTTTTCTAGGGACACGTCTCTCTGCAGATGGTTACAGCCTCCTTCGGTTTGCGCAGATCACCCTCAGACGAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGCC---TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3839862 115 + 4876863 GTTTTCTAGGGACACGTCTCTCTGCAGATGGTTACAGCCTCCTTCGGTTTGCGCAGATCGCCCTCAGACGAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGCC---TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730244 115 + 115148730 GTTTTCTAGGGACACGTCTCTCTGCAGATTGTTACAGCCTCCTTCGGTTTGCGCAGATCGCCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGCC---TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012540 115 + 190429646 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCGGTTTGTGCATATCACCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTCAATCCACAGCC---TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955328 116 + 189454096 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCGGTTTGTGCATATCACCCTCAGACAAAATGTCAGCTTGTCTCTCAATGAAGCTCTTCAATCCACAGCC--TTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347048 115 - 25927173 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCGGTTTGTGCATATCGCCCTCAGACAAAATGTCACCATGTCTCTCAATGAAGCTCTTCAATCCACAGCC---TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376777 118 + 4669795 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCGCTTTGTGCATATCGCCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTCAATCCACAGCCTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334469 116 + 135778131 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTGCAGCCTCCTTCGGTTTGTGCAGATGGCCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTCAATCCACAGCC--TTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788456 116 - 2847728 gttTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCGGTTTGTGCATATCGCCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTCAATCCACAGCC--TTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 902856 116 + 2368649 GTTTTCCAGGGACAGGTCTCTCTGCAGATTGCTACAGCCTCCTTCAGTTTGTGCAGATCGCCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAACTCTTTAATCCACAGCC--TTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634484 117 - 190850796 GTTTTCTAGGGACACTTCTGTCTGCAGATTGTTACAGCCTCCTTCGCTTTGAGCAGATAACCCTCAGTCAAAATGTCAGCATGTGGCTCAATGAAGCTCTTTAATCCACAGCC-TTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014075 116 - 2196201 gttTTCTAGGGACACTTCTCTCTGCAGATTGTTACAGCCTCCTCTGCTTTGAGCAGATTACCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGGC--TTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3408838 117 - 5030052 gttTTCTAGGGACACTTCTCTCTGCAGATCGTTACAGCCTCCTTTGCTTTGAGCAGATTACCCTCAGACAAAATGTCAGCATGTCTCTCAATGAAGCTCTTTAATCCACAGTC-TTTT i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M e otoGar3.GL873580 11245631 80 - 11315646 I a score=32637.000000 s hg38.chr4_KI270789v1_alt 131630 4 + 205944 TTTG s panTro5.chr4 192919039 4 + 194502333 TTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802695 4 + 195804263 TTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3839977 4 + 4876863 TTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730359 4 + 115148730 TTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012655 4 + 190429646 TTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955444 4 + 189454096 TTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347163 4 - 25927173 TTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376895 4 + 4669795 TTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334585 4 + 135778131 TTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788572 4 - 2847728 TTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 902972 4 + 2368649 TTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634601 4 - 190850796 TTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014191 4 - 2196201 TGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3408955 4 - 5030052 TTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11245711 4 - 11315646 TTTT i otoGar3.GL873580 I 80 C 0 e micMur3.chr14 17521081 551 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=621483.000000 s hg38.chr4_KI270789v1_alt 131634 66 + 205944 TTTT----CAGCTCAGTTGTTTCTGGTCGGTGCAAAGCTGACTGCAGTTTTTCTTCTCTTTTCAA-T---------GTTT s panTro5.chr4 192919043 66 + 194502333 TTTT----CAGCTCGGTTGTTTCTGGTCGGTGCAAAGCTGACTGCAGTTTTTCTTCTCTATTCAA-T---------GTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802699 66 + 195804263 TTTT----CAGCTCGGTTGTTTCTGGTCGGTGCAAAGCTGACTGCAGTTTTTCTTCTCTATTCAA-T---------GTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3839981 66 + 4876863 TTTT----CAGCTCAGTTGTTTCTGGTCGGTGCAAAGCTGACTGCAGTTTTTCTTCTCTTTTCAA-T---------GTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730363 66 + 115148730 TTTT----CAGCTCAGTTGTTTCTGGTTGGTGCAAAGCTGACTGCAGTTTTTCTTCTCTTTTCAA-T---------GTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012659 65 + 190429646 TTTT----CAGCTCAGTTTTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955448 65 + 189454096 TTTT----CAGCTCAGTTTTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347167 65 - 25927173 TTTT----CAGCTCAGTTTTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376899 65 + 4669795 TTTT----CAGCTCAGTTTTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334589 68 + 135778131 TTTT-TTCCAGCTCAGTTTTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788576 65 - 2847728 TTTT----CAGCTCAGTTTTTTCTGGTCAATACAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAA-T----------TTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 902976 70 + 2368649 TTTTTTTCCAGCTCAATTGTTTCTGGTCAATGCAAAGCTGACTGCAGTTTTTGTTCTCTTTTCAATT----------TTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634605 75 - 190850796 TTTT----CAGTTCAGTTGTTTCTGGTCAGTGCAAAGCCGACTGCAGTTTTTCTTCTCTTTTGAA-GTTTTCCAATTTTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014195 75 - 2196201 TTTC----CAGCTCCGTTGTTTCTGGTCAGTGCAAAGCTGACTGCAGTTTTTCTTCTCTTTTCAA-TTTTTCCAATTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3408959 73 - 5030052 TTTT----CAGTTCAGTTGTTTCTGGTCAGTGCAAAGCTGACTGCAGTTTTTCT--TCTTTTCAA-TTTTTCCAATTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17521632 66 - 93316391 tttt----cAGCTCAGTTGCATCTGGTCAGTGCAAAGCTGGCTGCAATTTTTCTTCTCCTTTCCA-T---------GTTT i micMur3.chr14 I 551 I 19 s otoGar3.GL873580 11245715 64 - 11315646 TTTT----CAGCTCAGTTATTTATGATCAGGGCAAAGCTGGCCACAAGTTTTCT--TTCTTTCCA-T---------GTTT i otoGar3.GL873580 C 0 I 9 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=99520.000000 s hg38.chr4_KI270789v1_alt 131700 10 + 205944 GTAACTTTTC s panTro5.chr4 192919109 10 + 194502333 GTAATTTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802765 10 + 195804263 GTAATTTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840047 10 + 4876863 GTAATTTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730429 10 + 115148730 GTAATTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012724 10 + 190429646 GCAATTTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955513 10 + 189454096 GCAATTTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347232 10 - 25927173 GCAATTTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376964 10 + 4669795 GCAATTTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334657 10 + 135778131 GCAATTTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788641 10 - 2847728 GCAATTTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903046 10 + 2368649 GCAATTTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634680 10 - 190850796 GCAATTTTTC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014270 10 - 2196201 GCAATTTTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409032 10 - 5030052 GCAATTTTTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11245788 10 - 11315646 ACAATTTTCC i otoGar3.GL873580 I 9 C 0 e micMur3.chr14 17521698 19 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=483788.000000 s hg38.chr4_KI270789v1_alt 131710 44 + 205944 TTCTCTGTGCTTGACCTCTAAATT-AGGATTTGTGTTGAAGTAAA s panTro5.chr4 192919119 44 + 194502333 TTCTCTGTGCTTGACCCCTAAATT-AGGATTTGTGTTGAAGTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802775 44 + 195804263 TTCTCTGTGCTTGACCCCTAAATT-AGGATTTGTGTTGAAGTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840057 44 + 4876863 TTTTCTGTGCTTGACCTCTAAATT-AGGATTTGTGTTGAAGTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730439 44 + 115148730 TTCTCTGTGCTTGACCTCTAAATT-AGGATTTGTGTTGAAGTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012734 44 + 190429646 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955523 44 + 189454096 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347242 44 - 25927173 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3376974 44 + 4669795 TTCCCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334667 44 + 135778131 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTATGTTGAGGTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788651 44 - 2847728 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903056 44 + 2368649 TTCTCTGTGCTTGACCTCTGAATT-GGGATTTGTGTTGAGGTAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189634690 44 - 190850796 TTCTCTGTGCTTGACCTCTAAATT-AGGATTTGTGTTGAAGTAAA i calJac3.chr3 C 0 I 314 s cebCap1.NW_016107886v1 1014280 44 - 2196201 TTCTCTGTGCTTGACCTCTAAATT-GGGATTTGTGTTGAAGTAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409042 44 - 5030052 TTCTCTGTGCTTGACCTCTAAATT-GGGATTTGTGTTGAAGTAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17521717 45 - 93316391 TTCTATGTGCTTGACCTCTAGGGTTAGGATTTGTGTTGAAGTAAA i micMur3.chr14 I 19 C 0 s otoGar3.GL873580 11245798 43 - 11315646 TTCTGTGTGCTTGACCTCTAGCTTAAGGATTTGTGTTGAAATA-- i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=47849.000000 s hg38.chr4_KI270789v1_alt 131754 5 + 205944 GAATT s panTro5.chr4 192919163 5 + 194502333 GAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802819 5 + 195804263 GAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840101 5 + 4876863 GAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730483 5 + 115148730 GAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012778 5 + 190429646 GAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955567 5 + 189454096 TAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347286 5 - 25927173 GAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377018 5 + 4669795 GAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334711 5 + 135778131 GAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788695 5 - 2847728 GAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903100 5 + 2368649 GAATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635048 5 - 190850796 GAATT i calJac3.chr3 I 314 C 0 s cebCap1.NW_016107886v1 1014324 5 - 2196201 GAATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409086 5 - 5030052 GAACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17521762 5 - 93316391 TAATT i micMur3.chr14 C 0 I 223 e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M e otoGar3.GL873580 11245841 0 - 11315646 C a score=24302.000000 s hg38.chr4_KI270789v1_alt 131759 3 + 205944 GTA s panTro5.chr4 192919168 3 + 194502333 GTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802824 3 + 195804263 GTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840106 3 + 4876863 GTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730488 3 + 115148730 GTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012783 3 + 190429646 ATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955572 3 + 189454096 ATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347291 3 - 25927173 ATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377023 3 + 4669795 ATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334716 3 + 135778131 ATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788700 3 - 2847728 ATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903105 3 + 2368649 ATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635053 3 - 190850796 ATA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014329 3 - 2196201 GTA i cebCap1.NW_016107886v1 C 0 I 350 s aotNan1.NW_018492112v1 3409091 3 - 5030052 GTA i aotNan1.NW_018492112v1 C 0 I 355 s otoGar3.GL873580 11245841 2 - 11315646 -TA i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=275450.000000 s hg38.chr4_KI270789v1_alt 131762 48 + 205944 ATAACCTGCAGAGTC-ACCCTTAAATCTGGATACCCCCTCTTTCTCTTT s panTro5.chr4 192919171 48 + 194502333 ATAACCTGCGGAGTC-ACCCTTAAATCTGGATACCCCCTCTTTCTCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802827 48 + 195804263 ATAACCTGCGGAGTC-ACCCTTAAATCTGGATACCCCCTCTTTCTCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840109 48 + 4876863 ATAACCTGCGGAGTC-ACCCTTAAATCTGGATACCCCCTCTTTCTCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730491 42 + 115148730 ATAACCTGCAGAGTC-GCCCTTAAATCCGGATGCCCC------CTCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012786 47 + 190429646 ATAACCTGCGGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955575 47 + 189454096 ATAACCTGCGGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347294 47 - 25927173 ATAACCTGCGGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377026 47 + 4669795 ATAACCTGCGGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334719 47 + 135778131 ATAACCTGCAGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788703 47 - 2847728 ATAACCTGCAGAGTC-TCCCTTAAATCC-GATACCTCCTCTTTCTCTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903108 47 + 2368649 ATAACCTGCGGAGTC-TCCCTTAAATCT-GATACCTCTTCTTTCTCTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635056 46 - 190850796 ATAATCTGTGGAGTC-TCCCTTAAATCCAGATAACACCCGTTTGTCT-- i calJac3.chr3 C 0 C 0 s otoGar3.GL873580 11245843 43 - 11315646 ACAATCTTTGGAATCTTCTTTTAAATCCTGATAATCCATCTCC------ i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1014332 350 - 2196201 I e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e canFam3.chr16 16970167 901 - 59632846 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3409094 355 - 5030052 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=7800.000000 s hg38.chr4_KI270789v1_alt 131810 1 + 205944 C s panTro5.chr4 192919219 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802875 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840157 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730533 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012833 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955622 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347341 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377073 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334766 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788750 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903155 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16971068 1 - 59632846 c i canFam3.chr16 I 901 C 0 e calJac3.chr3 189635102 0 - 190850796 C e cebCap1.NW_016107886v1 1014332 350 - 2196201 I e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3409094 355 - 5030052 I e saiBol1.JH378165 13118259 1328 - 14256875 M e otoGar3.GL873580 11245886 0 - 11315646 C a score=143225.000000 s hg38.chr4_KI270789v1_alt 131811 17 + 205944 TCTCTCAGAATGGAGTA s panTro5.chr4 192919220 17 + 194502333 TCTCTCAGAATGGAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802876 17 + 195804263 TCTCTCAGAATGGAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840158 17 + 4876863 TCTCTCAGAATGGAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730534 17 + 115148730 TCTCTCAGAATGGGGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012834 17 + 190429646 TCTCTCAGAATGGAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955623 17 + 189454096 TCTCTCAGAATGGAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347342 17 - 25927173 TCTCTCAGAATGGAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377074 17 + 4669795 TCTCTCAGAATGGAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334767 17 + 135778131 TCTCTCAGAATGGAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788751 17 - 2847728 TCTCTCAGAATGGAGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903156 17 + 2368649 TCTCTCAGAATGGAGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635102 14 - 190850796 ---CTCAGAACTGAGAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014682 17 - 2196201 TCTCTCAGAACTGAGTA i cebCap1.NW_016107886v1 I 350 C 0 s otoGar3.GL873580 11245886 16 - 11315646 TCTCTCGGAATTGAGT- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16971069 17 - 59632846 tcTTGAAGAGCTGAGTT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e aotNan1.NW_018492112v1 3409094 355 - 5030052 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=297648.000000 s hg38.chr4_KI270789v1_alt 131828 31 + 205944 CTCCAGAGCAATGTTCTCCACTTCTCCCACG s panTro5.chr4 192919237 31 + 194502333 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802893 31 + 195804263 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840175 31 + 4876863 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730551 31 + 115148730 CTCCAGAGCAGTGTTCTCCATTTCTCCCACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012851 31 + 190429646 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955640 31 + 189454096 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347359 31 - 25927173 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377091 31 + 4669795 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334784 31 + 135778131 CTCCAGAGCAATGTTCTCCACTTCTCCCATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788768 31 - 2847728 CTCCAGAGCAATGTTCTCCACTTCTCCCATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903173 31 + 2368649 CTCCAGAGCAATGTTCTCCACTTCTCCCACG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635116 31 - 190850796 CTCCACAGCACTGTTCTCCACTCCTCCACCA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1014699 31 - 2196201 CTCCACAGCACTGTTCTCCCCTCCCCCTCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409449 31 - 5030052 CTCCACAGCACTGTCCTCCACTCCTCCCCCG i aotNan1.NW_018492112v1 I 355 C 0 s otoGar3.GL873580 11245902 28 - 11315646 TTTGAAAGGAATGT--TTCACTTCTCC-ATG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16971086 31 - 59632846 TTTAAAAGGGATGTTCTCCACTTCTCCCATG i canFam3.chr16 C 0 C 0 e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I e saiBol1.JH378165 13118259 1328 - 14256875 M a score=1257169.000000 s hg38.chr4_KI270789v1_alt 131859 120 + 205944 GCATT---ATCGCACCCCTAAG---TCTCTCTTCTAACTAGGATAT----TCTTCTCTGGGTTCTCAGGTCCCTGGAGGTCTCAGGGACATTGATGCCATGTTCAGGGTCTAAAAGGTAAGG-TTTTTGTG s panTro5.chr4 192919268 120 + 194502333 GCATT---ATCGCACCCCTAAG---TCTCTCTTCTGATTAGGACAT----TCTTCTCTGGGTTCTCAGGTCCCTGGAGGTCTCAGGGACATTGATACCATATTCAGGGTCTAAAAGGTAAAG-TTTTTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192802924 120 + 195804263 GCATT---ATCGCACCCCTAAG---TCTCTCTTCTGATTAGGACAT----TCTTCTCTGGGTTCTCAGGTCCCTGGAGGTCTCAGGGACATTGATACCATATTCAGGGTCTAAAAGGTAAGG-TTTTTGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840206 120 + 4876863 GCATT---ATCGCACCCCTAAG---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGTTCTCAGGTCCCTGGAGGTCTCAGGGACATTGATGCCATGTTCAGGGTCTAAAAGGTAAGG-TTTTTGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730582 120 + 115148730 GCGTC---ATCGCACCCCTGAG---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGTTCTCAGGTCCCTGGAGGTCTCAGGGACGTTGATGCCATGTTCAGGGTCTAAAAGGTAAGG-TCTTTGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189012882 120 + 190429646 GCATC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955671 120 + 189454096 GCATC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347390 120 - 25927173 GCAAC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377122 120 + 4669795 GCATC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334815 120 + 135778131 GCATC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788799 120 - 2847728 GCATC---ATGACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903204 120 + 2368649 GCATT---ATCACACCCCTAAA---TCTCTCTTCTAATTAGGATAT----TCTTCTCTGGGCTCTCAGGTCCCTGGAGGTCTCAGGGACATTGGTGCCATGTTCAGTGTCTAAAAGGTAAGG-TTTTTGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635147 117 - 190850796 GCATC---ACCACACCCCGAAA---TCTCTTTTCTAATTAGGATAT-------TCTTTGGGTTCTTGGCTCCCTGGAGGTCTCAGGAAAATTGGTGCTGCATTCAGTGTCTAAAAGGTAAGG-CTTTTGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119587 120 - 14256875 GTGTC---ACCACACCCCGAAA---TCTCTTTCCTAATTAGGATAT----TCGTCTTTGGGTTCTCAGCTCCCTGGAGGTCTCAGGAAAATTGGTGCTGTCTTCAGTGTCTAAAAGGTAAGG-CTTTTGCT i saiBol1.JH378165 M 1328 C 0 s cebCap1.NW_016107886v1 1014730 120 - 2196201 GTGTC---ACCGCACCCCGAAA---TCTCTTTTCTAATTAGGATAT----TCTTCACTGAGTTCTCAGCTCCCTGGAGGTCTCAGGAAAATTAGTGCCATGTTCAGTATCTAAAAGGTAAGG-CTTTTGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409480 120 - 5030052 GCGTC---ACTGCACCCCGAAA---TCTCTTTTCTAATTAGAATAT----TCTTCTTTGGGTTCTCGGCTCCCTGGAGGTCTCAGGAAAATTGGTGTCGTGTTCAGTGTCTAAAAGGTAAGG-CTTTTGCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11245930 117 - 11315646 GCATT---ATCATACCCCTTAAACCTCACCTTTCTACTTAGGATGT----TTTTCTTAACACTCTCAAAATACTAGAATTTTCAGAAAGATTGGAACTACATTCAGGATCTCAATGGT-------TTTGCT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16971117 130 - 59632846 ACATTTGAATATCCCCCCTAGA-CTTCACTCTTTCAATTAGAATTTTTTTTTTTTTTTAGGTTCTCAGGACATTGTAATTCTTGGAGAAATTGGTACTATCTTCAGGATCTGGAAGGTAATGTTTTTTGCT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17521767 223 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I a score=708684.000000 s hg38.chr4_KI270789v1_alt 131979 59 + 205944 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTCGTGAGATATTTTTCACAGT s panTro5.chr4 192919388 61 + 194502333 CTTTTTGTACTTCTTCAGTTTGGCCCAGATGTTCTTGTATTTGTCAGGTATTTTTCACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803044 61 + 195804263 CTTTTTGTACTTCTTCAGTTTGGCCCAGATGTTCTTGTATTTGTCAGGTATTTTTCACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840326 59 + 4876863 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGGTATTTTTCACAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730702 59 + 115148730 CTTT--GTGCTTCTTCAGTTTGGCCCAGATGTCCTTGCATTTGTCAGATATTTTTCACAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013002 59 + 190429646 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955791 59 + 189454096 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347510 59 - 25927173 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377242 59 + 4669795 CTTT--GTACTTCTTCAGTTTGGCCTAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334935 59 + 135778131 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788919 59 - 2847728 CTTT--GTACTTCTTCAGTTTGGCCTAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903324 59 + 2368649 CTTT--GTACTTCTTCAGTTTGGCCCAGATGTCCTTGTATTTGTCAGATATTTTTCACAGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635264 59 - 190850796 CTTT--TTACTTCTTCAGTTTGGTCCATGTGTTCTTGTATTTGTCAGATATTTTTCACAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119707 48 - 14256875 CTTT--TTACTTCTTCAGTTTGGTCCACGTGTTCTTG-----------TATTTTTCACAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1014850 59 - 2196201 CTTT--TTACTTCTTCGGTTTGGTCCATGTGTTCTTGTATTTTTCAGGTGTTTTTCACAGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409600 59 - 5030052 CTTT--TTACTTCTTCAGTTTGGGCCACGTGTTCTTGTATTTGTCAGATATTTTTCACAGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17521990 59 - 93316391 CTTT--GTACTTCTTCAGCTTGGCCCACAGGCCCTTATATTAGTAAGATATTCTTCATAGT i micMur3.chr14 I 223 C 0 s otoGar3.GL873580 11246047 54 - 11315646 CTT-------TTCTTCAGTCTGGCCCACCTGTCCTCGCATTTGTAAGATATTCTTTATGGT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16971247 57 - 59632846 CTTT--GTACTTCTTTAATTTGGCCGA-ATGCCCTTGTATTTGGAAGATATTCTT-ATAAC i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I e mm10.chr8 86620322 51 - 129401213 I a score=14275.000000 s hg38.chr4_KI270789v1_alt 132038 1 + 205944 G s panTro5.chr4 192919449 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803105 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840385 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730761 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013061 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955850 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347569 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377301 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334994 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788978 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903383 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635323 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119755 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1014909 1 - 2196201 G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409659 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17522049 1 - 93316391 G i micMur3.chr14 C 0 I 72 s otoGar3.GL873580 11246101 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620373 1 - 129401213 G i mm10.chr8 I 51 C 0 s canFam3.chr16 16971304 1 - 59632846 A i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1453418 15154 - 2520184 I a score=272653.000000 s hg38.chr4_KI270789v1_alt 132039 27 + 205944 ATTCCTACAGTATTTTAAGATCAG-TTC s panTro5.chr4 192919450 27 + 194502333 ATTCCTACAGTATTTTAAAATCAG-TTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803106 27 + 195804263 ATTCCTACAGTATTTTAAAATCAG-TTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840386 27 + 4876863 ATTCCTACAGTATTTTAAAATCAG-TTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730762 27 + 115148730 ATTCCTACAGTATTTTAAAATCAG-TTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013062 27 + 190429646 ATTCCTACGTTATTTTAAAGTCAG-TTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955851 27 + 189454096 ATTCCTACGTTATTTTAAAGTCAG-TTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347570 27 - 25927173 ATTCCTACGTTATTTTAAAGTCAG-TTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377302 27 + 4669795 ATTCCTACGTTATTTTAAAGTCAG-TTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134334995 27 + 135778131 ATTCCTACGTTATTTTAAAGTCAG-TTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2788979 27 - 2847728 ATTCCTACATTATTTTAAAGTCAG-TTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903384 27 + 2368649 ATTCCTATGTTATTTTAAAGTCAG-TTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635324 27 - 190850796 TTTCCTACATTATTTTACAACCAG-TTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119756 27 - 14256875 TTTCCTACATTATTTTAAAAATGG-TTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1014910 28 - 2196201 TTTCCTACATTATTTTAAAATCAGTTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409660 27 - 5030052 TTTCCTACATTATTTTAAAATCAG-TTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11246102 27 - 11315646 TTTCCTAGATTATATTTTAGCCAA-TTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620374 26 - 129401213 ATCCCTAGATTTGTTTTAAATCTA-TT- i mm10.chr8 C 0 C 0 s canFam3.chr16 16971305 27 - 59632846 TTTCCAAGATTAATTTTTAATAGA-TTT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17522050 72 - 93316391 I e dasNov3.JH570353 1453418 15154 - 2520184 I a score=433258.000000 s hg38.chr4_KI270789v1_alt 132066 39 + 205944 TCTCACCTGTTTTT----ACTCTTTTTGTCTACATAGGGGATA s panTro5.chr4 192919477 39 + 194502333 TCTCACCTGTTTTT----ACCCTTTTTTTCTACATAGGGGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803133 39 + 195804263 TCTCACCTGTTTTT----ACCCTTTTTTTCTACATAGGGGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840413 39 + 4876863 TCTCACCTGTTTTT----ACTCTTTTTGTCTACATAGGGGATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730789 39 + 115148730 TCTCACCTGTTTTT----ACTCTTTTTGTCTACATAGGGTATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013089 37 + 190429646 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGGAGATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955878 37 + 189454096 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGGAGATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347597 37 - 25927173 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGGAGATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377329 37 + 4669795 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGGAGATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335022 37 + 135778131 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGGAGATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789006 37 - 2847728 TCTCACCTATTTTA----A--CTTTTTGTCTACATAGAAGATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903411 37 + 2368649 TCTCACCTGTTTTT----A--CTTTTTGTCTACATAGGAGGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635351 38 - 190850796 TCT-ACCAATTTTT----ACTCTTTCTGTCTGCATAGGGAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119783 39 - 14256875 TCTCACCTGTTTTT----ACTCTTCTTGTCTGCATAGGGAATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1014938 39 - 2196201 TCTCACCTGTTTTT----ACTCTTTTTGTCTACATAGGGAATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409687 39 - 5030052 TCTCACCTGTTTTT----ACTCTTTTTGTCTACATATGGAATA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11246129 39 - 11315646 TCTTACCTGCTTTT----ATTCCTTTTGCTTACATAAGGGACA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620400 39 - 129401213 TCTTAACTGTCTTT----CTTCTTTATGCCTACATGGACCATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16971332 43 - 59632846 TCTTATCTGTTTTTTTAAATTATTTTTGTTTACACAAGGGATG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1468572 38 - 2520184 TCTTACCTGTGTTT----ATTCTTTTAGCTTAAATAGGGG-TA i dasNov3.JH570353 I 15154 C 0 e micMur3.chr14 17522050 72 - 93316391 I a score=2609861.000000 s hg38.chr4_KI270789v1_alt 132105 203 + 205944 TCAGAGACAGGATATAAATAGTAATATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATGTATTTAGATTATTACAATTTGTACAGACTCTAAGCAGAAATATAATCACATCATTTATGAT-ATTTAT-CTTCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGATGGTGGCCTTGATCTTTTTGT s panTro5.chr4 192919516 203 + 194502333 TCAGAGACAGGATATAAATAGTAATATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATACATTTAGATTATTACAATTTGTACAGACTCTAAGCAGAAATATAATCACATCATTTATGAT-ATTTAT-CTTCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGATGGTGGCCTTGATCTTTTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803172 203 + 195804263 TCAGAGACAGGATATAAATAGTAATATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATACATTTAGATTATTACAATTTGTACAGACTCTAAGCAGAAATATAATCACATCATTTATGAT-ATTTAT-CTTCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGATGGTGGCCTTGATCTTTTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840452 203 + 4876863 TCAGAGACAGGATATAAATAGTAATATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTCTAAGCAGAAATATAATCACATCATTTATGAT-ATTTAT-CTTCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGATGGTGGCCTTGATCTTTTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112730828 204 + 115148730 TCAGAGACAGGATATAAATAGTAATATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTCCAAGCAGAAATATAATCATATCATTTATGATCGTTTAT-CTTCATAAACAGATGTTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGATGGTGGCCTTGATCTTTTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013126 204 + 190429646 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187955915 204 + 189454096 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347634 204 - 25927173 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377366 204 + 4669795 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAGTAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335059 204 + 135778131 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCCTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789043 204 - 2847728 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTTCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGCGGTGGCCTTGATCCTTCTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903448 204 + 2368649 TCAGAGACAGGATATATATAATAGTATTTT--ATTCTT------TCAGGAAGCTATA-----------------------------------------AATATATTTAGATTATTACAATTTGTACAGACTCCAAGCAGAAATATAATCACACCATTTATGACAGGTTAT-CTCCATAAATAGATATTTGAATTGGCTTCCAAAATGACC-TTAGAGATGTACTTACTTAATGGTGGTGGCCTTGATCCTTCTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635389 201 - 190850796 TCAGAGGCAGGATATAAATAATAATATCTT--ATTCTT------CCAGGAAGCTATA-----------------------------------------AATGTATTTGGGTTATTACAATTTGTACAGACTCT---TAGAAAAGTAATCGCACCGTTTATGATAGTTTAT-CATCATTAGCAGATACTTGAATTGGCTTCCAAAATGGCC-TTAGAAATGTGCCTACTTGATGATGGCAGTCTAGATCTTTCTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13119822 201 - 14256875 TCAGAAATAGGATATAAATAATAATATCTT--ATTCTT------CCAGGAAGCTCTA-----------------------------------------AATATATTTGGGTTATTACAGTTTGTACAGACTCT---TAGAAAAGTAATTGCACCATTTATGATAGTTTAT-CATCATTAGTAGATACTTGAATTGGCTTCCAAAATGGCC-TTAGAAATGTGCTTACTTGATGGTGGCAGCCTTGATCTTTCTGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1014977 201 - 2196201 GCAGAGACAGGATATAAATAATAATATCTT--ATTCTT------CCAGGAAGCTCTA-----------------------------------------AATATATTTGGGTTGTTACAATTTGTACAGACTCT---TAGAAAAGTAATCGCACCATTTATGATAGTTTAT-CATCATCAGTAGATAGCTGAATTGGCTTCCAAAATGGCC-CTAGAAGTGTGCTGACTCGATGATGGTAGTCTTGATCTTCCTGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409726 201 - 5030052 TCAGAGACAGGATATAAATAATAATATCTT--ATTCTT------CCAGGAAGCTATA-----------------------------------------AATATATTTGGGTTATTACAATTTGTACAGACTCT---TAGAAAAATAATCACACCATTTATGATAGTTTAT-CATCATTAGTGGATACTTGAATTGGCTTCCAGAATGGCC-TTAGAAATGTGCTTACTTGATGATGGTAGTCTTGATCTTTCTGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17522122 205 - 93316391 TCAGAAAGAGGATATAAATAACAATATTTT--ATTCTT------CCAGGAGAGTATA-----------------------------------------AATATATTCAGGTTATTAAAATTTGTACAGACTTCAAGAAGAAAAATAATCACACCATTTATGATAGTTTAT-AATCACAAATAGTTATTTGATTTGGTTTCTAGCATTGCCATTAGAAATGTACTTATTTAATCATTGCAGTCGTGGTCGTTTTGT i micMur3.chr14 I 72 C 0 s otoGar3.GL873580 11246168 204 - 11315646 TCGGAGAGAGGATATGAATAACAATATTTT--ATTCTT------CCTGGAGAGTATA-----------------------------------------AATATATTTA-GTTATTAAAATTGGTACAGACTTCAAGAAGAAAAATAATCACATCATTTATGACAGTTTAT-AATCACCAATAGATATTTGATTTGGTTTCTAGCATTCCCATTAGAAATGTGCTTATGTAATAGTTGCAGTCTTGGTCTTTATGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620439 206 - 129401213 TCAGAG--AAGACATAAGTAACAGAATTTTTCAATCTTTTAATATTAGAAGATAATC-----------------------------------------ATTACATTTAGCTTATTAAGTTTTGTACATATTCCAAGAAGAAA-ATCATTATGTTACCTATTTC-ATATAT-AACCATAAATAGATATTTGATTTAGTTGCTAACATTGTCACTAGAGATTTAC--ATTTAATCAT-GTAATATTTGTTTCTCTGT i mm10.chr8 C 0 I 147 s canFam3.chr16 16971375 233 - 59632846 TCAGAG--AGGATATAAATAAC--TATTTT--AT----------TCAGGAGATTATGTGTGTGTGTGTGCGCGCACGCATGCATGTGTATATTTAGGCCATATACTTAGGTCATTAAGATCTGAACAGATTTCTAAAAGAAAAATAATCACATGATTTAGGATTACTTAT-AATCATAACTAGATATTTGAATTGGTTTCTAACATTGCCATTAGGAATTTCCTCCTTTAATCTT-ATAGTCTTGGTCTGT---- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1468610 191 - 2520184 TCAGAAAGGGGATATAATTAACAATATTTT--ATTCCT------TTTGGAGATTACA-----------------------------------------CATTTATTTAGTTCATTAAAATGTGTACAAGTTTCTAGAGGAAATA--------------ATGACATGTTATAATTCATGAATACATGTGTGACTTGGTTTCTAACCTTCTCACTAGGAATTTACTTATTTAATCATTAT-GTCTTGGTCTTCTTGT i dasNov3.JH570353 C 0 C 0 a score=2776782.000000 s hg38.chr4_KI270789v1_alt 132308 241 + 205944 GATT-------------AGATAA-----------T-----A--------------------GCCCAGCATGTGGCCACAGTAGCAGAAACACA--CA-GTATGT------GCTGGTTAATTGGCTCTACTCGCTTCATGCATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGGTACATGTTGAGCTTCTCAATAATCAAAGAAGAAATCAGG-----TGCCAGGTCACAATCCAGACCCAAGAAGTGTCTGCTTTTCTG--TTTTCCACATGAAGTCATCATTTAGCATTCTTTTCTTCTTTTTCA s panTro5.chr4 192919719 241 + 194502333 GATT-------------AGATAA-----------T-----A--------------------GCCCAGCATGTGGCCACAGTAGCAGAAACACA--CA-GTATGT------GCTGGTTAATTGGCTCTACTCGCTTCATGCATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGGTACATGCTGAGCTTCTCAATAATCAAAGAAGAAATCAGG-----TGCCAGGTCACAATCCAGACCCAAGAAGTGTCTCCTTTTCTG--TTTTCCACATGAAGTCATCATTTAGCATTCTTTTCTTCTTTTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803375 241 + 195804263 GATT-------------AGATAA-----------T-----A--------------------GCCCAGCATGTGGCCACAGTAGCAGAAACACA--CA-GTATGT------GCTGGTTAATTGGCTCTACTCGTTTCATGCATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGGTACATGCTGAGCTTCTCAATAATCAAAGAAGAAATCAGG-----TGCCAGGTCACAATCCAGACCCAAGAAGTGTCTCCTTTTCTG--TTTTCCACATGAAGTCATCATTTAGCATTCTTTTCTTCTTTTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840655 241 + 4876863 GATT-------------AGATAA-----------T-----A--------------------GCCCAGCATGTGGCCACAGTAGCAGAAACACA--CA-GTATGT------GCTGGTTAATTGGCTCTACTCGCTTCATGCATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGGTACATGTTGAGCTTCTCAATAATCAAAGAAGAAATCAGG-----TGCCAGGTCACAATCCAGACCCAAGAAGTGTCTCCTTTTCTG--TTTTCCACATGAAGTCATCATTTAGCATTCTTTTCTTCTTTTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731032 242 + 115148730 GATT-------------AGAGGA-----------T-----A--------------------GCCCAGCATGTGGCCACAGTAGCAGAAACACA--TA-GTATGT------GCTGGTTAATTGGCTCTACTAGCTTCATGTATTGTTCCAGCTTATCTGCT---GCTTGTGGAC-TGGTACATGCTGAGCTTCTCAATAATCAAAGAAGAAATCAGG-----TGCCAGGTTACAATCCAGACCCAAGAAGTGTCTGCGTTTCTG-TTTTTCCACATTAAGTCATATTTTAGCTTTCTTTTCTTCTTTTCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013330 242 + 190429646 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCGCAATAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCTTATCTGCT---GCTTGTGTAC-TGTTACATGCCAAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCCGGGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956119 242 + 189454096 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGTAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCTTATCTGCT---GCTTGTGTAC-TGTTACATGCCAAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCCGGGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24347838 242 - 25927173 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGTAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCTTATCTGCT---GCTTGTGTAC-TGTTACATGCCAAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCCGGGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377570 236 + 4669795 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGTAGCAGAAACACA--GA-------------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCGTATCTGCT---GCTTGTGTAC-TGTTACATGCCAAGCTTCCCAATGATCAGAGAAGAAATCAGG-----TGCCGGGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335263 242 + 135778131 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGTAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGTCACATGCCGAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCCGGGTGGCAGTGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789247 242 - 2847728 GATT-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGTAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTTGCTTCATGTATTATTACAGCGTATCTGCT---GCTTGTGTAC-TGTTACATGCCAAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCTGGGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATTCTTTTCTTCCTTTTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903652 241 + 2368649 GATC-------------AGATGA-----------T-----A--------------------ACCCAGCATGTGGCCACAGCAGCAGAAACACA--GA-GTATGT------GCTGGTTAATTGGCTCTACTCGCTTCATTTATTATTACAGCTTATCTGCT---GCTTGTGGAC-TGTTACATGCTGAGCTTCTCAATGATCAGAGAAGAAATCAGG-----TGCC-GGTGGCAATGCAGACCCAAGAAGTGTCTGCTTTTCTG-TTTTTCCACATGAAGTCATTACTCAGCATGTTTTTCTTCCTTTTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635590 223 - 190850796 GGTT-------------AGAGGA-----------C-----A--------------------GCCCAGCACGCGTCCGCAGTAGCAGAGGCACA--TATGAGAGC------GCTGGTTAATTGGCTGTGCTCGCTTCACGCATTACTGCAG--CATCTGCT---GCGTGTGGAC-GGTTACATGCCGAGCCCCTCAATAATCAAAGAAGAAATCAGA-----GGCCAGGTCACGATCCAGACCCCAGAAGCGCCTGCTTTTCTG-TATTTCCA------------------CATTCTTCTCTTCCTTTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13120023 242 - 14256875 GGTC-------------AGAGGA-----------C-----A--------------------GCCCAGCGTGCGTCCTCAGCAGCAGACACACA--TA-GTAAGC------GCTGGCTAATTGGCTCTGCTCGCTTCATGCATTATTGCAGCACATCTGCT---GCATGTGGAC-TATTCCATGCCAAGCCTCTCAATAGTCAAAGCAGAAGTCAGA-----TGCCAGGTCACAGTCCAGACCCCAGAAGTGCCTGCTTTTCTG-TTTTTCCACATGAAGTCATCATTTAGCATTCTTCTCTTCCTTTTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1015178 228 - 2196201 AGTT-------------AGAGGC-----------T-----A--------------------GCCCAGCATGCGTCCGCAGTAGCAGACGCACA--CG-GTAAGC-------CTGGTTAATCGGCTCTGCTAGC-TCGTGCATTACTGCAGCGCGTCTGCT---G--------C-TGTTCCATGCCAAGCCTCTCAATAATCAAAG----AGTCCGA-----TGCCAGGTCACAGTCCAGACCCCAGAAGTGCCTGCTTTTCTA-TTTTTCCACATGAAGTCATCATTTAGCATTCTTCTCTTCCTTTTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3409927 243 - 5030052 GGTT-------------AGAGGA-----------T-----A--------------------GTCCAGCATGCGTCCACAGTAGCAGTCACACA--TATGTAAGC------TCTGGTTAATTGGCTATGCTCGCTTCATGCATTATTGCAGCATATCTGCT---GCATGTGGAC-TGTTACATGCCGAGCCTCTCAATAATCAGAGAAGAAATCAGA-----TGCCAGGTCACAATCCAGACCCCAGAAGTGCCTGCTTTTCTG-TTTTTCCACATGAAGTCATCATTTAGCATTCTTCTCTTCCTTTTCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17522327 244 - 93316391 GATT-------------AGGTGA-----------T-----A--------------------GTCCGGCATGCAACCACGGTAGCAGACATACA--CA-GTATGT------GCTGGTTAATTGGTTACTCTCACTTCATGTATTATTATGACATATCTGCT---GCTTGTGAACTTGTTACATGCTGAGCTTCTTAAGAATCAAAGAAGAAAACAGG-----TGCTGGGTCACAATGCTGACCCAAGCAGAGCCTGCTTGTCTGTTTTTTCCATATGAAGTCATCATTTAGAATTCTGTAGTCCTCTTCCA i micMur3.chr14 C 0 I 18 s otoGar3.GL873580 11246372 220 - 11315646 GATC-------------AGGTGA-----------C-----A--------------------ATCCAGCCCGCAGCTGTGGTAGCAGACACAGG--C---------------------------TTATACCCATTTCATGCACTGTTATGACATAGCTGCTGTCGTTTGTGAACTTGTTAC------GAATTCTTAAGATTTGAAGAAGAAAACAGG-----TGCTGGGTCACAA-GTCGACCCAAGCTGGCCCTACATTTCTGTTTTTTCTGTATGAAGTCATCATTTAGAATTCTGTTGTCCTCTTTCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86620792 241 - 129401213 gatt-------------gattga-----------ttgGGAA--------------------TATCAGGATATGAAGACATGGTCAAGTACACAATCA-GGATACTAGACATCTGATTAATTAATTATCCCCACATCATG--TTGCCATGACATGCTCTCT---A-TTGTGAAT-TTGCTAATGTTGAGCCTCTTAGTAGTCAAGGAGAA---CAGG-----TATTATGTTA------AGACCAAAGTAGGG-CTGCTTTTCTG-TTTTCCCTTATGAAGCCCTCTTTTAGAATGCTGTTCT-CTTTTCCA i mm10.chr8 I 147 I 1 s canFam3.chr16 16971608 260 - 59632846 GATTTAGAAGGTATAGGAGAGGAAAATGGATAGCT-----A--------------------GTCAAGCATGAAACCCTGATAGGAACCATACA--TA-GTGTGT------GCTGGTTAATTGGTTATAGTCATTTCATGTATTATTACAAC--AGCGTTT---GCTTGTGAACTTGTAACATGCTGAGCTTCTCAATAATCAAAGAAGAAAACAGG-----TGCTCATTCAAAATGCTGACCCAAGCAGTGCCTGCTTTTCTG--TTTTCCATCTGAAGCCATCATTTAGAATT----TGCCCTCTTTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1468801 253 - 2520184 GATT-------------AAGTGA-----------T-----ACAGGAGAGAAGGCATTACTGATCAGGCACTCGAATACCCTAGGAGATGTATG--TA-GTATGC------TCTGGGTAATTGTTTTCACTTGCTTCA---------------CAGCTTCT---GCGTGTGTACTTGTTACACACTGAGCTGCACAGTAATCAAAGTAGAAATCAGAGAGGTGATTGGTTCAAAATGCTGACTCAAGCTGTACCTGCTTTTCTG-TTTTGCCACTTGAAGTCATCAGTCAGAATTTTGTTTTTCTCTCTCA i dasNov3.JH570353 C 0 C 0 a score=220639.000000 s hg38.chr4_KI270789v1_alt 132549 19 + 205944 ATGGTGGAGAAGCCTCTGG s panTro5.chr4 192919960 19 + 194502333 ATGGTGGAGAAGCCCCTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803616 19 + 195804263 ATGGTGGAGAAGCCCCTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840896 19 + 4876863 ATGGTGGAGAAGCCCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731274 19 + 115148730 ACGGTGGAGAAGCCCCTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013572 19 + 190429646 ATAGTGGAGAAGCCCATGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956361 19 + 189454096 ATAGTGGAGAAGCCCATGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348080 19 - 25927173 ATAGTGGAGAAGCCCATGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377806 19 + 4669795 ATAGTGGAGAAGCCCATGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335505 19 + 135778131 ATAGTGGAGAAGCCCATGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789489 19 - 2847728 ATAGTGAAGAAGCCCATGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903893 19 + 2368649 ATGGTGGAGAAGCCCATGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635813 19 - 190850796 ATGGTGGAGACGCCCACGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13120265 19 - 14256875 GCGGTGGAGACGCCCATGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1015406 19 - 2196201 ATGGTGGAGACGCCCACGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410170 19 - 5030052 ATGGTGGAGACGCCCACAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11246592 19 - 11315646 ATGGCAGTGAACACCCTGG i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86621034 16 - 129401213 ---ATGGAGAAAGAGATGG i mm10.chr8 I 1 I 1 s canFam3.chr16 16971868 19 - 59632846 CCAGTGGAAAAATCCATAG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1469054 19 - 2520184 ATGCTGGTGAAGTCCATGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17522571 18 - 93316391 I a score=183139.000000 s hg38.chr4_KI270789v1_alt 132568 15 + 205944 -TATGTAAAACATGAG s panTro5.chr4 192919979 15 + 194502333 -TATGTAAAACATGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803635 15 + 195804263 -TATGTAAAACATGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840915 15 + 4876863 -TTTGTAAAACATGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731293 15 + 115148730 -TATGTAAAACATGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013591 15 + 190429646 -TATGTAAAGCATGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956380 15 + 189454096 -TATGTAAAGCATGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348099 15 - 25927173 -TATGTAAAGCATGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377825 15 + 4669795 -TATGTAAAGCATGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335524 15 + 135778131 -TATGTAAAGCATGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789508 15 - 2847728 -TATGTAAAGCATGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903912 15 + 2368649 -TATGTAAAGCATGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635832 15 - 190850796 -TAGGTAAAGCCTGAG i calJac3.chr3 C 0 I 117 s saiBol1.JH378165 13120284 15 - 14256875 -TATGTAAAGCCTGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1015425 15 - 2196201 -TATGTAAAGCCTGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410189 15 - 5030052 -TATGTAAAGCCTGAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17522589 15 - 93316391 -TATATAAAGTTGGAG i micMur3.chr14 I 18 C 0 s otoGar3.GL873580 11246612 15 - 11315646 -TATGTAAAGCCAGCA i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86621051 15 - 129401213 -CAAACAAACCACAAG i mm10.chr8 I 1 C 0 s canFam3.chr16 16971888 15 - 59632846 -CCTCTAAAGCATGAG i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1469073 16 - 2520184 TTATACAAAGCATGAG i dasNov3.JH570353 C 0 C 0 a score=7272309.000000 s hg38.chr4_KI270789v1_alt 132583 552 + 205944 TAAAGTTCAAATAGGGTCAAATTCCGGAAGGCAGCACAGAACTTTTCCTCCTAGCCGTGTTAC-TTTGGCCGTACATCCTTCTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAACCATTCCTCAAAAGGGCATTTAGAGAGTCATTAGGGT-CTAGAGTCATGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCA--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGTTCTGCATAATGTGTCCAGTTGGTATGTAATGATGCACGCACAGA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATAATCAAAATTATACCTTGAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTAAGGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATACACAAAAATAAACCTTATGCACGTAAGTGTA-GGCCTCA-CTGCTGGGCTGTATTCCTTCCTACCACGGACCCTG---------TAAATACTGTAGAACTATCCAAACAACATCTAAACTTCAGATGTAAAATTCCTAACT s panTro5.chr4 192919994 552 + 194502333 TAAAGTTCAAATAAGGTCAAATTCCAGAAGGCAGCACAGAACTTTTCCTCCTAGTCCTGTTAC-TTTGGCCGTACATCCTTCTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATTCCTCAAAAGGGCATTTAGAGAGTCATTAGCGT-CTAGAGTCATGAAATGAGTAGAATAACAGAAGATAGCATGTCAGAAGACCA--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGTTCTGCATAATGTGTCCAGTTGGTATGTAATGATGCACGCACAGA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATAATCAAAATTATACCTTGAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTAAGGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATACACAAAAATAAACCTTATGCACGTAAGTGTA-GGCCTCA-CTGCTGGGCTGTATTCATTCCTACCACGGACCCTG---------TAAATACTGTAGAACTATCCAAACAACATCTAAACTTCAGATGTAAAATTCTTAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192803650 551 + 195804263 TAAAGTTCAAATAAGGTCAAATTCCAGAAGGCAGCACAGAACTTTTCCTCCTAGTCCTGTTAC-TTTGGCCGTACATCCTTCTATCATCCCATGCAGCCGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATTCCTCAAAAGGGCATTTAGAGAGTCATTAGCGT-CTAGAGTCATGAAATGAGTAGAATAACAGAAGATAGCATGTCAGAAGACCA--TGGGCAGCCCCCAGGC-GTATTTGCAGTCCCCGTTCTGCATAATGTGTCCAGTTGGTATGTAATGATGCACGCACAGA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATAATCAAAATTATACCTTGAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTAAGGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATACACAAAAATAAACCTTATGCACGTAAGTGTA-GGCCTCA-CTGCTGGGCTGTATTCATTCCTACCACGGACCCTG---------TAAATACTGTAGAACTATCCAAACAACATCTAAACTTCAGATGTAAAATTCTTAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3840930 552 + 4876863 TAAAGTTCAAATAGGGTCAAATTCCAGAAGGCAGCACAGAACTTTTCCTCCTAGCCCTGTTAC-TTTGGCCGTACATGCTTCTATCATCCCATGCAGCCAGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATTCCTCAAAAGGGCATTTAGAGAGTCATTCGCGT-CTAGGGTCGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGTTCTGCATAATGTGTCCAGTTGGTATGTAATGATGCATGCACAGA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATAATCAAAATTATACCTTGAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTAAGGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATACACAAAAATAAACCTTATGCACGTAAGTGTA-GGCCTCA-CTGCTGGGCTGTATTCCTTCCTACCACGGACCCTG---------TAAATACTGTAGAACTATCCAAACAACATCTAAACTTCAGATGTAAAATTCCTAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731308 552 + 115148730 TAAAGTTCAAATAGGGTCAAATTCCAGAAGGCAGCACAGAACTTTTCCTCCTAGCCCTGTTAC-TTTGGCCGTACATGCTTCTATCATCCCATGCAGCCGGGAATGGGGGCTGCCATTTTCATTTTGATCAGTCATTCCTCAAAAGGGCATTTAGAGAGTCATTAGCGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCA--TGGGCAGCCCCCAGGCTGTATGTGCAGTCCCCATTCTGCATAATGTGTCCAGTTGGTATGCAATGATGCATGCACATA------AGAGAACCAGACACTCA------------AATGTTTTGGCTATAATCAAAATTATACCTTGAGTTTCAATGTATTTACGTGTTTGAAAATGGTATTTTAAGGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATACACAAAAATAAACCTTATGTACATAAATGTA-GGCCTCA-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------TAAATACTGTAGAACTATCCAAACAACATCTAAACTTCAGTTGTAAAATTCCTAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189013606 552 + 190429646 TAAAGTTCAAATAGGGTCAAATTCCAAAAGGCAGCACAGAACTCTTCCTCCTAGCCCTGTTAC-TCTGGCCGTACGTGCTTGTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACCTTAAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTACAAACCAGAAATGTACATAGTGTTCTGTGTTTTCAATGCACAAATATAAACCTCACGCATGTAAATGTA-GGCCCTT-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCCGATGGAAAATTCCTAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956395 552 + 189454096 TAAAGTTCAAATAGGGTCAAATTCCAAAAGGCAGCACAGAACTCTTCCTCCTAGCCCTGTTAC-TCTGGCCGTACGTGCTTGTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTTCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACCTTAAGTTTCAATGTACTTATGTGTTTGAAAATGGTATTTTACAAACCAGAAATGTACATAGTGTTCTGTGTTTTCAATGCACAAATATAAACCTCACGCATGTAAATGTA-GGCCCTT-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348114 552 - 25927173 TAAAGTTCAAATAGGGTCAAATTCCAAAAGGCAGCACAGAACTCTTCCTCCTAGCCCTGTTAC-TCTGGCCGTACGTGCTTGTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACCTTAAGTTTCAATGTATTTATGTCTTTGAAAATGGTATTTTACAAACCAGAAATGTACATAGTGTTCTGTGTTTTCAATGCACAAATATAAACCTCACGCATGTAAATGTA-GGCCCTT-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3377840 552 + 4669795 TAAAGTTCAAATAGGGTCAAATTCCAAAAGGCAGCACGGAACTCTTCCTCCTAGCCCTGTTAC-TCTGGCCGTACATGCTTGTATCATCCCATGCAGCTGGGAATGGGAGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACCTTAAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTACGGACCAGAAATGTACATAGTGTTCTGTGTTTTCAATGCACAAATATAAACCTCACGCATGTAAATGTA-GGCCTCC-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134335539 552 + 135778131 TAAAGTTCAAATAGGGTCAAATTCCGGAAGGCAGCACAGAACTCTTCCTCCTAGCTCTGTTAC-TCTGGCCGTACGTGCTTGTATCATCCCATGCAGCAGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACTTTGAGTTTCAATGTACTTATGTCTTCGAAAATGGTATTTTATAGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATGCACAAAAATAAACCTTATGCATGTAAATGTA-GGCCTCC-CTGCTGGGCTGTATTCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2789523 552 - 2847728 TAAAGTTCAAATAGGGTCAAATTCCAAAAGGTAGCACAGAACTCTTCCTCCTAGCCGTGTTAC-TCTGGCCGTACGTGCTTGTATCATCCCATGCAGCTGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAAAGGGCATTTAGAGAGTCATTAGAGT-CTAGAGTTGTGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCCGCTCTGCATAATGTGTTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGACTATCATCAAAATTATACCTTAAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTACGGACCAGAAATGTACATAGTGTTCTGTGTTTTCAATGCACAAATATAAACCTCACGCATGTAAATGTA-GGCCTCC-CTGCTGGGCTGTATTCATTCCTTCCATAGACCCTG---------CAAATACTGTAGAGCTATCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 903927 552 + 2368649 TAAAGTTCAAATAGGGTCAAATTCCAGAAGGCAGCACAGAACTCTTCCTCCTAGCCCTGTTAC-TCTGGTCGTACGTGCTTGTATCATCCCATGCAGCCGGGAATGGGGGCTGCCATTTTCATTTTGATCAATCATCCCTCAAGAGGGCATTCAGAGAGTCATTAGAGT-CTAGAGTTGCGAAATGAGTAGAATAACAGAAGGTAGCATGTCAGAAGACCG--TGGGCAGCCCCCAGGCTGTGTTTGCAGTCGCCGCTCTGCATAATGTGCTCATTTGGTATGTAATGATGCACGCACGTA------AGAGAACCAAACACTCA------------AATGTTTTGGCTATCATCAAAATTATACCTTGAGTTTCAATGTACTTATGTCTTTGAAAATGGTATTTTACAGACCAGAAATGTACACAGTGTTCTGTGTTTTCAATGCACAAAAATAAACCTCATGCATGTAAATATG-GGCCTCC-CTGCTGGGCTGTATGCATTCCTACCATGGACCCTG---------CAAATACTGTAGAGCTGTCCAAACAACATCTAAACTTCAGATGGAAAATTCCTAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189635964 540 - 190850796 aaaaGGTCAAATAGGGTCAGATTCCAGAGGGCAGCACGGAGCGTTTCCT------CCTGGTCC-TTCGGCCTTAGGTGCTGGTATCATCCCACACAGCCGGGAACGAGGGCCGCCGTTTTCATTAGGATCAATCGTTCCTCAAAAGTGCA--TTCGGAGTCACTGGCGT-CTGGAGTGGTGAAAGGAGTA-AATAACAGGAGGCAGCACGTCGGAGGCCC---TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCAGTTCTGCATAATGTGCCCATTTGATATATAAGGACGCACGAACTTA------AGGGAACCAAGCACTCC------------AATGTTTCGGCTGTAATCAAAATTATCCCTTCAGTTTCACCGTAC-TATGTCTCTGAAAATAGTATTTTAACGACCGAAAATGTACAGAGTGTTCTGTGTTTTCAATACATAAA-ATAAACCTTATGCATGTCAGTGTA-GGCCTCA-CTGCTGGGCCGTATTCATTCCTACCCTGGACCCTG---------TAAATACCGTGGAACGAGCCGAAGAACATCTAAACTTCAGATGTAAATTTCCTAACT i calJac3.chr3 I 117 C 0 s saiBol1.JH378165 13120299 548 - 14256875 TAAAGGTCCAGTAGGGTCAGATTCCAGAGGGCAGCACAGAGCATGTCCTCCCTGCCCTGTTCC-TTCGGCCGTAGGTGCTGGTGTCACCCCATGCAGCAGGGACTGAGGGCTGCCGTTTTCATTAGGATCAATCATTCCTCAAAAGTGCA--TTGGGAGTCATTGGCGC-CTGGAGAGGTGAAATGAGTAGAATAACAGAAGGCAGCATGTCAGGGGCCC---TGGGCAGCCCCCAGGCTGTATTTGCAGTCGAAATTCTGCATAATGTGCCCAGTTGGTATGTAATGACGCACGAACTTA------AGAGAACTCAACACTCC------------AATGTTTCGGCTGTAATCAGAATTATGCCTTCAGCTTCATTGTACTTATGTCTCTGAAAATGGTACTTTAAGGACCAAAAATATACAGAGTGTTCTGTGTTTTCAATACGTAAA-ATAAACCTTATGCCTGTCAGTGTA-GGCCTCA-CTGCTGGGCTGTATTCATTCCTGCCGTGGACCCTG---------TAAATACCGTGGAACTAGCCAAAGAACATCTAAACTTCAGATGTAAGTTTCCTAACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1015440 548 - 2196201 TGAAGGTCAAACAGGGTCAGAATACAGAGGGCA-CCCAGAGCCCTTCCTCCTGGCCCTGTTCC-TTTGGCCGTGGGTGCTGGTATCACCCCACGCAGCAGGGACTGAGGGCCGCCGTTTTCATTAGGATCCATCATTCCTCAAAAGTGCACGTAGGGAGTCATTGGCGT-CTGCAGTGGTGAAATGAGCAGTGTAACAGAAGGCAGCGCGTCAGAGGCCC---TGGGCA-CTCCCAGGCTGTATCTGCAGTCCTGGTTCTGCATAATGTGCCCAGCTGATATGTAATGACCCACGAACTTA------AGAGAACCAAACACTCC------------AATGTTTCGGCTATAATCAAAATTATACCTTCAGTTTCATTGTACTTATGTCTCTGAAAATGGTATTTTAAGGACCAAAAATGTATGGAGTGTTCTGTGTTTTCAATACATAAA-ATAAACCTTATGCATGTCAGTGCA-GGCCTCA-CTGCTGGGCTGTGTTCATTCCTACCCTGGACCCTG---------TAAATACCGTGGAACTAGCCGAAGAACATCTAAACTTCAGATGTAAATTTCCTAACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410204 548 - 5030052 TAAAGGTCAAATAGGGTCAGATTCCAGAGGGCAGCACAGAA-GTTTGCTCCTGGCCCTGTTCC-TTTGGCTGTAGGTGCTGGTATCATCCCATGCAGCAGGGAATGAGGGCCGCCATTTTCATTAGGATCAATCATTCCTCAAAAGTGCTCGTAGGGAGTCATTGGCGT-CTGGAGTGGTGAAATGAGCAGAATAACAGAAGGTAGCACGTCAGAGGCCC---TGGGCAGCCCCCAGGCTGTATTTGCAGTCCCGGTTCTGCATAATGTGCCCAGTTGCTATGTAATGACGCATGAACTTA------AGAGAACCAAACATTCC------------AATGTTTTGGCTATAATCAAAATTATACCTTCAGTTTCATTGTACTTATGTCTCTGAAAATGGTATTTTAAGGACC-AAGATGTACAGAGTGTTCTGTGTTTTCAATACATAAA-ATAAACCTTATGCTTGTCAGTGTA-GGCCTCA-CTGCTGGGCTATATTCAGTCCTACCCTGGACCCTG---------TAAATACCGTGGAACTAGCCGAAGAACATCTAAACTTCAGATGTAAGTTTCCTAACT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17522604 548 - 93316391 TAAAGTTCAAATAGGGTCACATTCCA-----CAGCATGGTATTTTTCCTCCCAACTGTGTTACTTTTGGCCATAGAGGCTTCAATCAACCCATGAAGCAGGGAGTGAGGGCTGCAATTTTCATTATGATCAATAATTCCTCTACAGTGCATTTAGAAGATTGTTAGGCTTCCAGAGTCGTGAATTAAGCAGAATAACAGAAGGTGGCATGTCAAAAGACCA--TGAACA-TCCCCAGGCTATATTTGCAGTACCAGTTCTGCATAATGTGTCCAGTTGGTATGCAATCATGCATGAACTTA------AAAGAACAGAAAGCTGG------------TACATTTCAGCTACAATCAGAATTGTACCTGCAGTTTCAATGTACGTATGGCTTTGAAAATGTTATTTTAAGGACCAAAAATGTACACAATGTTCTGTGTTTTCAATACACATAAATAAATCTTATACCTATAAATGTA-GGCCTTA-CTGTTGATCTGTATTCATACCTACCATGGATCATG---------TAAATACTGTAAAACCATTGAAACAATATCTATACTTCAGATGTAAAATTCCTAATT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11246627 560 - 11315646 TAAAGTTCAAATAGGGTCACATTCCAGAGGGCAGCAAGGTATTTTTCCTCCTGGCCCTATTACTTTTGGCCATC-AGGCTTCTATTAACCCATGCAGCAGGGCATGAAGGCTGCAATTCTCATTATGACCAGAAATTCCTCCACGGTGCATTCAGAGGGGTATGAGCCTCCTTGAATCATG-ATTAAGCAGAAAAACAG-AGGTAGCACATC-AAAGACCATGTGAGCA-TGTCCAGGCCATATCTGCAGCCCCAGTTCTGTACCACGTGTCCAGTTGGAATGCAACTGCGCATGGACTTA------GAACAACAAAAAGCTGG------------AATGTTTTGGCTACAATTA-AATTGTACCTACAGTTTCAATGTACTTATATCTTTGAGAATGGTATTTTAAGAACCAAAAATATATACAATGTTCTGTGTTTTCAGGACACAAAAACAAATATTATCACTGCAAACATA-GCCCTCAGTTGTTGAACTATATTCATACCTATCATGGGTTATGTAAATACCATAAATACCATAAAACCATTATCATACTATCTACATTTCAGAGGTAAAATTCCTAATT i otoGar3.GL873580 C 0 I 3337 s mm10.chr8 86621066 542 - 129401213 TCAAGTACAAACAAGTTCAAATTCCAATGGGCAAGGCATGCCGTTTTCTCCCAGTTCTGTTAC-CTTTTCATTATACCC----ACTAGTCCACAAAGCTGGGACTGTGGGATATAATCTTCATTAGGAATAATAATTCCTCAAAAGTGCATTTAGAGAGTTGTTAGCCTTCTAGAGTCATGAATTAAGTAGAATAACAGAAGGTGGCATGTCAGAA--CCT--AAAGCAGCCCTTAGGCTGTTTCGGCAGAAACAGTTCTGCATAATGATTCCAATCGGTATATAATCATGTGTGAACTTAAATTTGAAAGAACAAAAAGCTAG------------AATATTTGGGCTATAACCAAAATTGTAGTTGTGGTTTCAATACCTTTCTGTCTCTGA-AGTAGTATTCTAAGGACTCCAAGCATACACACTGTTTTACATTTTGAATACATATAAGCAAACCTTAAAGAATGCACAATG-GACATTG-----------GTATTCATAGCTCCCATGGATCACG---------CAAGTCTCAGTAAAATGTTCAAGCACCATCTGAAACTCAGATGTAGGACTCTAGATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16971903 539 - 59632846 TAAAGTTCAAATAGGGTCACATTCCTGAGGGCAAAGCATTATTTTTCCTCCCAGCCCTGTTACATTTGGCCACACATGGTTATATCAACCCATGCAGCAGAGAATAAGGGCTGTGATTTTCATTATGATCACTAATTCCTTAAAAGTGCATCTAGAGGGCTGTTAGCCTTCTAGAGTCATGAATTAAGCAGAATAACAGAAGGTAGCATGTCAAAAGACCA--TAAGCAGGCCCCAGGCTATATTTGCAGTACTAGTTCTGCATAATGTTTCCAGTTGGTATGCAATCATGCATGAACTTA------AAAAAAAAAAAAAGCTA------------GAATTTTTGGCTATAATCAAAATTGTACCTGCAGGTTTAATGTACTTATGCCT-TGGAAATGGCATTTTAAGGATCCCAAATGTATACAACATCCTGTGTTTTCAATACTT----ATAAACCTATTGAATCTAAGTGTAGGGACTCA-CTGCTGATCTGTGTTCATAC---------ATTATG---------TAAATACCCTACACTACCCAAAAAAACATCTAAACTTCCGATGTGA--TTCCTAATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1469089 549 - 2520184 TGCACTTCAAATAGGATCAAATTCCAGAGGGCAGCACTCTTCTTTTCCTCCCATCACGCTACT-TTTGG--------------------CCATGCAGCAGGCAATGAAGGCTGCAATTTTCATTACGATCAATGATTCTTCAAAAGTGATTTCTGAGGGTTGTCAGCCTGCTAGAGTCATGAATTAAGAAGAGTATCAGAAGGTAGCAAGTCAGAAGACCA--TAAGCAGCCCCCAGGCTATCTCGGAAGTACCGGTTCTGCATAACGTTTCCAGTTGGTATGCAATCATGCATGAACTTAAACTA-AAAGAACAAAAAGCTAGatatatatatatattttttttGCTGTAACCAAAATGAAACCTGCAGTTTTGATGTACTTAAATCCTTGAAAAGGGCATTTCAAGGACCAAAAATTTAAGCAATGTTCTGTATTTTCAATACGTATAAACAAACCTTCTATATGTAA-TGGA-GGAGTCA-CTGCCGATCTCCATCCACTCCTACCACGGGCTGTG---------CAAACACTTTAAAACTATTCAGACATCAAATGAACTTCGTATGTGTCATTCCTCCTT i dasNov3.JH570353 C 0 C 0 a score=449547.000000 s hg38.chr4_KI270789v1_alt 133135 39 + 205944 CCTAATATTACAAACATTCAACTATTTTGATGGAAAAAA s panTro5.chr4 192920546 39 + 194502333 CCTAATATTACAAACATTCAACTATTTTGATGGAAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804201 39 + 195804263 CCTAATATTACAAACATTCAACTATTTTGATGGAAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841482 39 + 4876863 CCTAATATTACAAACATTCAACTATTTTGATGGAAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731860 39 + 115148730 CCGAATATTACAAACATTCAACTATTTTGATGGAAAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014158 39 + 190429646 CCTAATATTACATACATTCAACTATTTTGATATAAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956947 39 + 189454096 CCTAATATTACATACATTCAACTATTTTGATATAAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348666 39 - 25927173 CCTAATATTACTTACATTCAACTATTTTGATATAAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378392 39 + 4669795 CCTAATATTACATACATTCAACTATTTTGATATAAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336091 39 + 135778131 CCTAATATTACATACATTCAACTATTTTGATATAAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790075 39 - 2847728 TCTAATATTACATACATTCAACTATTTTGATATAAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904479 39 + 2368649 CCTAATATTACATACATTCAACTATTTTGATATAAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636504 39 - 190850796 CTTAACATTACATACATTCAACTCTTCTGATAGAAAACG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13120847 39 - 14256875 CTTAACATTACATACATTCAATTCTTCTGATAGAAAATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1015988 39 - 2196201 CTTAATATTACATACATTCAACTCTTCTGATAGAAAACG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410752 39 - 5030052 CTTAATATTACATACATTGAACTCTTCTGATAGAAAATG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17523152 39 - 93316391 CCTAATATCACATACACTCAACTATTCTGATAGAAAAAA i micMur3.chr14 C 0 I 134 s mm10.chr8 86621608 31 - 129401213 ------CCAACATACAGTCAGCTTTTGTGATGTAAAA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16972442 39 - 59632846 CCTAATATCATATACACTCAAGGGTTTTTATTTTAAAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1469638 34 - 2520184 CCTAATTCCATATATACTCAAGTACTTTGATAAA----- i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11247187 3337 - 11315646 I a score=1274676.000000 s hg38.chr4_KI270789v1_alt 133174 115 + 205944 TAGGAAGCATGACAATCATTTATAAGAGAAAGAAAATATAT-TTCTCAATGAACACAGATTCCTTGACATGGACACTTTCCTGCAGCTTCCGAAGACACCAGCAGTGGAAGGTTAT s panTro5.chr4 192920585 115 + 194502333 TAAGAAGCATGACAATCATTTATAAGAGAAAGAAAATGTAT-TTCTCAATAAACACAGATTCCTTGACATGGACACTTTCCTGCAGCTTCCGAAGACACCAGCAGTGGAAGGTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804240 115 + 195804263 TAAGAAGCATGACAATCATTTATAAGAGAAAGAAAATGTAT-TTCTCAATAAACACAGATTCCTTGACATGGACACTTTCCTGCAGCTTCCGAAGACACCAGCAGTGGAAGGTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841521 114 + 4876863 TAGGAAGCATGACAATCATTTATAAGAGAAAGAAAATATAT-TTCTCAATAAACACAGATTCCTTGACATGGACACTTTCCTGCAGCTTCC-AAGACACCAGCAGTGGAAGATTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112731899 114 + 115148730 TAGGAAGCACGACAATCA-TTATAAGAGAAAGAAAATGTAT-TTCTCAATAAACACAGATCCCTTAACATGGACACTTGCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014197 113 + 190429646 TAGGGAGAATGACAATCA-TTATAAGAGAAAG-AAATATAT-TTCTCAATAAACACAGATTCCTTAACATGGACCCTTTCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187956986 113 + 189454096 TAGGGAGAATGACAATCA-TTATAAGAGAAAG-AAATATAT-TTCTCAATAAACACAGATTCCTTAACATGGACCCTTTCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348705 113 - 25927173 TAGGGAGAATGACAATCA-TTATAAGAGAAAG-AAATATAT-TTCTCAATAAACACAGATTCCTTAACATGGACCCTTTCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378431 113 + 4669795 TAGGGAGAATGACAATCA-TTGTAAGAAAAAG-AAATATAT-TTCTCAATAAACACAGATTCCTTAACACGGACCCTTTCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336130 114 + 135778131 TAGGGAGAATGACAATCA-TTATAAGAGAAAGAAAATATTT-TTCTCAATAAACACAGATTCCTTAACACGGACCCTTTTCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790114 113 - 2847728 TAGGGAGAATGACAATCA-TTGTAAGAGAAAG-AAATATAT-TTCTCAATAAACACAGATTCCTTAACACGGACCCTTTCCTGAAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904518 114 + 2368649 TAGGGAGAATGACAATCA-TTATAAGAGAAAGAAAATATAT-TTCTCAATAAACACAGATTCCTTAACATGGACCCTTTCCTGCAGCTTCAGAAGACACCAGCAGTGGAAGGTTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636543 114 - 190850796 TAGGGAGCCTGACAGTCT-TTATAAGACAAAGACAATATAT-TTCTCAATAAACACAGATTCCTTAGCATTGACACTTTCCTGTAGGTTCAGCAGACACCAGAGGTGGGAAGTTAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13120886 114 - 14256875 TAGGGAGCATGACAATCT-TTATAAGAGAAAGAAAATATAT-TTCTCAATAAACACAGATTCCTTAACATTGACACTTTCCTGTAGCTTCAGAAGACACCAGCCGTGGAAAGTTAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1016027 114 - 2196201 TAGGGAGCATGACAGGCT-TTATTAGAGAAAGAAAATATAT-TTCTCAATAAACACAGATTCCTTAACATGGACACTTTCCTGTAGCTTCACAAGACACCAGCCGTGGAAAGTTAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410791 114 - 5030052 TAGGGAGCATGACAATCT-TTATAAGACAAAGAAAACGTAT-TTCTCAATAAACACAGATTCCTTAACATTGACACTTTCCTGTAGCTTCAGAAGTCACCAGCAGTAGAAAGTTAC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86621639 108 - 129401213 -ATGGAATTTTATAATCA---GCAGGACATA--ACATATGT-TTCTCAATAAATGCTCATTTCCTAACATTAGTGCTCAACTACAGCATCTGAAGATGTCAGCAGTCT-AGGTCAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16972481 111 - 59632846 -AGGAACCATAACAATTA-TTACAGAAGAAC--ATATATAT-TTCTCAATAAACACAGCTTCTTTAACACTGGTACTTTCCCACAGCTTCAGAAGACACCAGCAGTAGAGGGTTGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1469672 111 - 2520184 AAGGAATCGTGACAATTA-TTA----AAAAAGAAAATATATGTTCTCAATAAACATAAATCCCTTAACATCAACACTTTCATATAGCTTGAGAAGACACCATCAGGTAAAGGGTAT i dasNov3.JH570353 C 0 I 2245 e micMur3.chr14 17523191 134 - 93316391 I e otoGar3.GL873580 11247187 3337 - 11315646 I a score=323661.000000 s hg38.chr4_KI270789v1_alt 133289 39 + 205944 ACTATTCATCGATGGCCAGGGCTGG--TTGCAGG-AGATATT s panTro5.chr4 192920700 39 + 194502333 AGTATTCATCGATGGCTAGGGCTGG--TTGCAGG-AGATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804355 39 + 195804263 AGTATTCATCGATGGCTAGGGCTGG--TTGCAGG-AGATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841635 39 + 4876863 AGTATTCATCGATGGCTAGGGCTGG--TTGCAGG-AGATATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732013 40 + 115148730 AGTATTCATCGATGGCTAGGGCTGG--TTGCAGGAAGGTATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014310 40 + 190429646 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957099 40 + 189454096 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348818 40 - 25927173 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378544 40 + 4669795 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336244 40 + 135778131 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790227 40 - 2847728 AGGATTCATCAATGGCTAGGGCTGG--TTACAGGAAGATATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904632 40 + 2368649 AGGATTCATGGATGGCTGGGGCTGG--TTACAGGAAGGTATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636657 40 - 190850796 AGGATTAATCCACGGCGGGGGCTGC--CTGCAGGAAGACATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13121000 40 - 14256875 AGGATTAATCCACGGCCAGGGCTGT--TTGCAGGAAGACGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1016141 40 - 2196201 AGGCTTAGTCCACGGCCAGGGCTGC--TTGCAGGAAGACGTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410905 40 - 5030052 AGGATTAATCCACGGCCAGGGCTGC--TTGCAGGAAGACATT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86621747 31 - 129401213 AAGAT--------AGTCAGGGGTGGGATTTCAGG---ATGTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16972592 36 - 59632846 GTGGTTAATCTGAG----GGTCTGT--GTGAGAATAGACACC i canFam3.chr16 C 0 C 0 e micMur3.chr14 17523191 134 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e otoGar3.GL873580 11247187 3337 - 11315646 I a score=775569.000000 s hg38.chr4_KI270789v1_alt 133328 67 + 205944 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAACCACACCTGCTGAGGC-TAC s panTro5.chr4 192920739 67 + 194502333 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTGTAAAATATATGTCAACCACACCTGCTGAGGC-TAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804394 67 + 195804263 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTGTAAAATATATGTCAACCACACCTGCTGAGGC-TAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841674 67 + 4876863 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAACCACACCTGCTGAGGC-TAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732053 68 + 115148730 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATGTATGTCAACCACACCTGCTGAGACTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014350 68 + 190429646 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAAACACACCTGCTGAGACTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957139 68 + 189454096 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAAACACACCTGCTGAGACTTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348858 68 - 25927173 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAAACACACCTGCTGAGACTTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378584 68 + 4669795 ATGATGC-----------TTTGAAGGTTGCCCTGGTCATCTTTATAAAATATATGTCAAACACACCTGCTGAGACTTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336284 68 + 135778131 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTCAAACACACCTGCTGAGACTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790267 68 - 2847728 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTACAAAATATATGTCAAACACACCTGCTGAGACTTAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904672 68 + 2368649 ATGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATATGTTAAACACACCTGCTGAGACTTAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636697 65 - 190850796 CGGATGC-----------TTTGAAGGCTGTGCCGGTCATCTTCGTAAAATATACGTTAACCACGCCTGCTGAGGC-T-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13121040 67 - 14256875 TGGATGC-----------TTTGAAGGTTGTCCTGGTCATCGTTATAAAATATACGTTAACCACGCCTGCTGAGGC-TAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1016181 62 - 2196201 CGGACGC-----------GTTGAAGGTTGTCCTGGTCATTGTTATAA-----ACGTGAACCACACCGGCTGAGGC-TAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3410945 67 - 5030052 TGGATGC-----------TTTGAAGGTTGTCCTGGTCATCTTTATAAAATATACGTTAACCACGCCTGCTGAGAC-TAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17523325 67 - 93316391 ATGATGC-----------TTTGAAGGTTGCCCTGGTCATCTTTATACAATAGGTGTCAGCCACACCTGCTGAGGC-TAC i micMur3.chr14 I 134 I 803 s mm10.chr8 86621778 78 - 129401213 GTGATGCTCATGTTGTGTTTTAAAGATTGTGTTGATTATCTTTCTAAAGAAGGTATCAACCACATTTCCACCGGC-TGC i mm10.chr8 C 0 C 0 s canFam3.chr16 16972628 67 - 59632846 ACAATGC-----------TTTGAAGGTTGTTCTGATACTCTTTATGAAATTGGTATTGACATCACCTGCTGAGGC-TAC i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1469783 2245 - 2520184 I e otoGar3.GL873580 11247187 3337 - 11315646 I a score=264027.000000 s hg38.chr4_KI270789v1_alt 133395 33 + 205944 AGAGCACTGACAGAGGGTAAGAGACTAGAGAA-G s panTro5.chr4 192920806 33 + 194502333 AGAGCACTGACAGAGGGTAAGAGACTAGAGAA-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804461 33 + 195804263 AGAGCACTGACAGAGGGTAAGAGACTAGAGAA-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841741 33 + 4876863 AGAGCACTGACAGAGGGTAAGAGACTAGAGAA-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732121 33 + 115148730 AGAGCACTGACAGAGGGTAAGATACTAGAGAA-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014418 33 + 190429646 AGAACGCTGACAGAGGGTAAGAGACTAGAGAA-G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957207 33 + 189454096 AGAACGCTGACAGAGGGTAAGAGACTAGAGAA-G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348926 33 - 25927173 AGAACGCTGACAGAGGGTAAGAGACTAGAGAA-G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378652 33 + 4669795 AGAACGCTGACAGAGGGTAAGAGACTAGAGAA-G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336352 33 + 135778131 AGAGCACTGACAGAGGGTAAGAGACTAGAGAA-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790335 33 - 2847728 AGAACGCTGACAGAGGGTAAGAGACTAGAGAA-G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904740 33 + 2368649 AGAACACTGACAGAGGGTAAGAGACTAGAGAA-G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636762 14 - 190850796 ------------------GAGAGACTGAGGAG-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13121107 33 - 14256875 AGAACACTGACCGAGGCCGAGAGACTAAGGAGG- i saiBol1.JH378165 C 0 M 4959 s cebCap1.NW_016107886v1 1016243 32 - 2196201 AGAACACTGGCCGAGGCCGAGAGACTAGAGAG-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3411012 32 - 5030052 AGAACACTGACCGAGGCTGGGAGACTAAGGAG-- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86621856 18 - 129401213 AAAATGCTTACA-----TCAGAA----------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16972695 33 - 59632846 AGAATGCTGACAAAAGGTAAGAGACTAGAGGA-A i canFam3.chr16 C 0 C 0 e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e otoGar3.GL873580 11247187 3337 - 11315646 I a score=197915.000000 s hg38.chr4_KI270789v1_alt 133428 19 + 205944 GAAAAGCTTTGATAAGATA s panTro5.chr4 192920839 19 + 194502333 GAAAAGCTTTGATAAGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804494 19 + 195804263 GAAAAGCTTTGATAAGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841774 19 + 4876863 GAAAAGCTTTGACAAGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732154 19 + 115148730 GAAAAGCTTTGATAAGATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014451 19 + 190429646 GAAAAGCTTTGATAAGATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957240 19 + 189454096 GAAAAGCTTTGATAAGATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348959 19 - 25927173 GAAAAGCTTTGATAAGATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378685 19 + 4669795 GAAAAGCTTTGAGAAGATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336385 19 + 135778131 GAAAAGCTTTGATAAGATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790368 19 - 2847728 GAAAAGCTTTGAGAAGATA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904773 19 + 2368649 GAAAAGCTTTGAGAAAACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636776 19 - 190850796 GAAAAGCTTTGGTAAGACG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1016275 19 - 2196201 GAGAAGCTTTGATAAGACA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3411044 19 - 5030052 GAAAAGCTTTGATAAGACA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86621874 18 - 129401213 GGAAAGCTTTGA-AGGATA i mm10.chr8 C 0 I 221 s canFam3.chr16 16972728 19 - 59632846 GACAAGCTTTGATATGATA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=442706.000000 s hg38.chr4_KI270789v1_alt 133447 49 + 205944 GCTGAAGATAATCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT s panTro5.chr4 192920858 49 + 194502333 GCTGAAGATAATCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804513 49 + 195804263 GCTGAAGATAATCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841793 49 + 4876863 GCTGAAGATAATCAGAAAAGACGGTAACTAATCAAATAAACATCCTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732173 49 + 115148730 GCTGAAGATAATCAGAAAAGGAGGTAACTAATCAAATAAACATCCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014470 49 + 190429646 GCTGAAGACATTCAGAAAAGATGGTAACTAATGAAATAAACATCCTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957259 49 + 189454096 GCTGAAGACATTCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24348978 49 - 25927173 GCTGAAGACATTCAGAAAAGATGGTAACTAATGAAATAAACATCCTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378704 49 + 4669795 GCTGAAGACATTCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336404 49 + 135778131 GCTGAAGACATTCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790387 49 - 2847728 GCTGAAGACATTCAGAAAAGATGGTAACTAATCAAATAAACATCCTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904792 49 + 2368649 GCTGAAGATATTCAGAAAAGATGGCAACTAATCAAATAAACATCCTCTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636795 41 - 190850796 GCTGGAGATAATCAGGAAAGATGGTAACTAAGCAA------ACCCTC-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1016294 49 - 2196201 GCTGGAGATAATCGGGAAAGGTGGTAACTAAGCAAATAAACATCCTCTT i cebCap1.NW_016107886v1 C 0 I 112 s aotNan1.NW_018492112v1 3411063 49 - 5030052 GCTGGAGATAATCAGAAAAGATGGTAACTAAGCAAATAAACATCCTCTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16972747 46 - 59632846 TCTGAAGGTGATCAGAGAA---AGTAACTAATCAAATAAACATCCTGTT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86621892 221 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=450957.000000 s hg38.chr4_KI270789v1_alt 133496 59 + 205944 GCGTGCACAATGTCAGGAATGCAGCT----CTGGAAACAATGCCTTTGTCAGAGCACTGTTAG s panTro5.chr4 192920907 59 + 194502333 GCGTGCACAATGTCAGGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCACTGTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804562 59 + 195804263 GCGTGCACAATGTCAGGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCACTGTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841842 59 + 4876863 GCGTGCACAATGTCAGGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCACTGTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732222 59 + 115148730 GCATGCGCAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCACAGCACTGTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014519 59 + 190429646 CCGTGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957308 59 + 189454096 CCGTGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349027 59 - 25927173 CCGTGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378753 59 + 4669795 CCGTGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336453 59 + 135778131 CCATGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790436 59 - 2847728 CCGTGCACAGTGTCAAGAATGCAGCT----CTGGAAACAATGCCTTTGTCATAGCGCTGTTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904841 59 + 2368649 CTGTGCACAGTGTCAAGAATGCAGCT----CTGCAAACAATGCCTTTGTCATAGTGCTGTTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636836 51 - 190850796 -------CAGAGTCAGGAACGCGGCC----CCG-AAGCAATGCCTTTGTCACGGCACTGTCAG i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3411112 58 - 5030052 CCCTCCACAGAGTCAGGAACGCGGCT----CCG-AAGCAATGCCTTTGTCACAGCACTGTTAG i aotNan1.NW_018492112v1 C 0 I 5 s canFam3.chr16 16972793 61 - 59632846 --CTGAACAATGTCAAGAATGCCTCTTTGACTGAAAGCAATGCATTTGTAGCAGCAATGTTAG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86621892 221 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=35086.000000 s hg38.chr4_KI270789v1_alt 133555 8 + 205944 CCGTAGGG- s panTro5.chr4 192920966 8 + 194502333 CTGTAGGG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804621 8 + 195804263 CTGTAGGG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841901 8 + 4876863 CCGTAGGG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732281 8 + 115148730 CCACAGGG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014578 8 + 190429646 CCGTAGGG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957367 8 + 189454096 CCGTAGGG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349086 8 - 25927173 CCGTAGGG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378812 8 + 4669795 CCGTAGGG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336512 8 + 135778131 CCATAGGG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790495 8 - 2847728 CCGTAGGG- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904900 8 + 2368649 TCATGGGG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636887 4 - 190850796 ----AGAA- i calJac3.chr3 C 0 I 4 s canFam3.chr16 16972854 9 - 59632846 TCAGAAGCC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86621892 221 - 129401213 I e aotNan1.NW_018492112v1 3411170 5 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=255281.000000 s hg38.chr4_KI270789v1_alt 133563 33 + 205944 TGTGTGCCTTCCTCCTCTTGTGC----TTAGTGTTTG s panTro5.chr4 192920974 33 + 194502333 TGTGTGCCTTCCTCCTCTTGTGC----TTAGCGTTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804629 33 + 195804263 TGTGTGCCTTCCTCCTCTTGTGC----TTAGCATTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841909 33 + 4876863 TGTGTGCCTTCCTCCTCTTGTGC----TTAGTGTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732289 33 + 115148730 TGTGTGCCTTCCTCCTCTTGTGC----TTAGTGTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014586 33 + 190429646 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957375 33 + 189454096 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349094 33 - 25927173 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378820 33 + 4669795 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336520 33 + 135778131 TGTGTGCCTTGCTCCTCTTCTGC----TTCGGGTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790503 33 - 2847728 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904908 33 + 2368649 TGTGTGCCTTGCTCCTCTTGTGC----TTCGGGTTTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636895 37 - 190850796 CGTGCGCCTTGCTCCTCTTGTGCTGAGTTAGCGTCTG i calJac3.chr3 I 4 C 0 s aotNan1.NW_018492112v1 3411175 33 - 5030052 TGTGCGCCTTGCTCCTCTTGTGC----TTAGCGTTTG i aotNan1.NW_018492112v1 I 5 C 0 s canFam3.chr16 16972863 33 - 59632846 TGCATGCTTTGTCCCTCCTGTGT----TTAGCATCCC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86621892 221 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=312443.000000 s hg38.chr4_KI270789v1_alt 133596 57 + 205944 GAGAAtttttgttcgtttgtttgagacagagtctcactctgtcgcccaggctggagt s panTro5.chr4 192921007 57 + 194502333 GAGAAtttttgttcgtttgtttgagacagagtctcgctctgttgcccaggctagagt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804662 57 + 195804263 GAGAAtttttgttcgtttgtttgagacagagtctcgctctgtcgcccaggctagagt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841942 57 + 4876863 GAGAAtttttgttcgtttgtttgagacagagtctcactctgtcgcccaggctggagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732322 57 + 115148730 GAGAAtttttgtttgtttgtttgagacagagtctcgctgtgttgcccaggctggagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014619 57 + 190429646 GAGAAtttttgtttgtttgtttgagacagagttttgctctgtcacccaggctggaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957408 57 + 189454096 GAGAAtttttgtttgtttgtttgagacagagttttgctctgtcacccaggctggaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349127 57 - 25927173 GAGAAtttttgtttgtttgtttgagacagagttttgctctgtcacccaggctggaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378853 57 + 4669795 GAGAAtttttgtttgtttgtttgagacagagttttgctctgtcgcccaggctggaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336553 57 + 135778131 GAGAAtttttgtttgtttgtttgagacagagttttgctctgttgcccaggctggaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790536 57 - 2847728 GAGAAtttttgtttgtttgtttgagacagagttttgctctgtcgcccaggctggaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904941 57 + 2368649 GAGAATTTGTGTTTGTCTGCttgagacagagttttgctctgtcgcccaggctggagt i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16972896 17 - 59632846 GGGAATT----------------------------------------AAACGGGAGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189636932 0 - 190850796 C e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86621892 221 - 129401213 I e aotNan1.NW_018492112v1 3411208 0 - 5030052 C e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=1378316.000000 s hg38.chr4_KI270789v1_alt 133653 247 + 205944 gcaatggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctccgcctcagcctcctgaggagctgggactacaggtgcccaccaccatgcctgcctaatttttttgtattgttagtagagttggggtttcgccatcttggccaggctggtcttgaattcctgacctcgtgatccaccctccttgggctcccaaagtggtgggataacaggtgtcagccactgtgcccagccT s panTro5.chr4 192921064 247 + 194502333 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctccgcctcagcctcctgaggagctgggactacaggtgcccaccaccatgcctgcctaatttttttgtatttttagtagagttggggtttcgccatcttggccaggctggtcttgaattcatgacctcgtgatccaccctccttggtctcccaaagtgctgggattacaggtgtcagccactgtgcccagccT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804719 247 + 195804263 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctccgcctcagcctcctgaggagctgggactacaggtgcccaccaccatgcctgcctaatttttttgtatttttagtagagttggggtttcgccatcttggccaggctggtcttgaattcatgacctcgtgatccaccctccttggtctcccaaagtgctgggattacaggtgtcagccactgtgcccagccT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3841999 247 + 4876863 gcaatggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctccgcctcagcctcctgaggagctgggactacaggtgcccaccaccatgcctgcctaatttttttgtatttttagtagagttggggtttcgccatcttggccaggctggtcttgaattcctgacctcgtgatccaccctccttgggctcccaaagtgctgggattacaggtgtcagccactgtgcccagccT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732379 247 + 115148730 gcaatggtgcaatctcggctcactgcaacctccacctcccaggttcaagcaattctccacctcagcctcctgaggagctgggactacaggtgcccaccaccatgcctgcctaatttttttgtatttttagtagagttggggtttcaccatcttggccaggctggtcttgaattcctgacctggtgatccaccctcctcggcttcccaaagtgctgggattacaggtgtcagccaccgtgcccagGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014676 246 + 190429646 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctctgcctcagcctcctgaggagctgggactacaggcgcccaccaccacgcctggctaatttttttgtatttttagtagagatggggtttcactatcttggccaggctggtcttgaattcctgatcccatgatcca-ccgcctctgccccccaaagtgctggaatttcaggtgtcagcctccgcgcccagccT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957465 246 + 189454096 gcagtggcgcaatctcggctcactgcaacctctacctcccaggatcaagcaattctctgcctcagcctcctgaggagctgggactacaggcgcccaccaccacgcctggctaatttttttgtatttttagtagagatggggtttcactatcttggccaggctggtcttgaattcctgatcccatgatcca-ccgcctctgccccccaaagtgctggaatttcaggtgtcagcctccgcgcccagccT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349184 246 - 25927173 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctctgcctcagcctcctgaggagctgggactacaggcgcccaccaccacgcctggctaatttttttgtatttttagtagagatggggtttcactatcttggccaggctggtcttgaattcctgattccatgatcca-ccgcctctgccccccaaagtgctggaatttcaggtgtcagcctccgcgcccagccT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3378910 246 + 4669795 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctctgcctcagcctcctgaggagctgggactacaggcgcccaccaccacgcctggctaaggtttttgtatttttagtagagatggggtttcaccatcttggccaggctggtcttgaactcctgatcccatgatcca-ccacctctgccccccaaagtgctggaatttcgggtgtcagcctccgcgcccagccT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336610 246 + 135778131 gcagtggcgcaatctcggctcactgcaacctccacctcccgggttcaagcaattctctgcctcagcctcctgaggagctgggactataggcgcccaccaccacgcctggctaatttttttgtatttttagtagagatggggtttcaccatcttggccaggctggtcttgaactcctgatcccatgatcca-ccgcctctgccccccaaagtgctggaatttcaggtgtcagcctccgcgcccagccT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790593 246 - 2847728 gcagtggcgcaatctcggctcactgcaacctccacctaccgggttcaagcaattctctgcctcagcctcctgaggagctgggactacaggcgcccaccaccacgccgggctaatttttttgtatttttagtagagatggggtttcaccatcttggccaggctggtcttgaactcctgatcccatgatcca-ccgcctctgccccccaaagtgctggaatttcaggtgtcagcctccgcgcccagccT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 904998 246 + 2368649 gccgtggcgcaatctcggctcactgcaacctccacctcctgggttcaagcaattctccgcctcagcctcctgaggagctgggactacaggcacccaccgccacgcctggctaatttttttgtatttttagtagagatggggtttcaccatcttggccaggctggtcttgaactcctgatgccgtgatcca-ccgcctctgcctcccaaagtgctggaattacaggtggcagcctctgcgcccagccT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189636932 0 - 190850796 C e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e canFam3.chr16 16972913 0 - 59632846 C e mm10.chr8 86621892 221 - 129401213 I e aotNan1.NW_018492112v1 3411208 0 - 5030052 C e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=76167.000000 s hg38.chr4_KI270789v1_alt 133900 9 + 205944 GAGAATTTT s panTro5.chr4 192921311 9 + 194502333 GAGAATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804966 9 + 195804263 GAGAATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842246 9 + 4876863 GAGAATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732626 9 + 115148730 GAGAATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014922 9 + 190429646 GAGAATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957711 9 + 189454096 GAGAATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349430 9 - 25927173 GAGAATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379156 9 + 4669795 GAGAATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336856 9 + 135778131 GAGAATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790839 9 - 2847728 GAGAATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905244 9 + 2368649 GAGAATTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636932 9 - 190850796 GAGAATTTT i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3411208 9 - 5030052 GAGAATTTT i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e canFam3.chr16 16972913 0 - 59632846 C e mm10.chr8 86621892 221 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=19110.000000 s hg38.chr4_KI270789v1_alt 133909 2 + 205944 AA s panTro5.chr4 192921320 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804975 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842255 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732635 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014931 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957720 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349439 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379165 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336865 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790848 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905253 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636941 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3411217 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86622113 2 - 129401213 AA i mm10.chr8 I 221 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e canFam3.chr16 16972913 0 - 59632846 C e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11247187 3337 - 11315646 I a score=14277.000000 s hg38.chr4_KI270789v1_alt 133911 3 + 205944 AAA s panTro5.chr4 192921322 3 + 194502333 AAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804977 3 + 195804263 AAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842257 3 + 4876863 AAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732637 1 + 115148730 A-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014933 3 + 190429646 AAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957722 3 + 189454096 AAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349441 3 - 25927173 AAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379167 3 + 4669795 AAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336867 3 + 135778131 AAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790850 3 - 2847728 AAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905255 3 + 2368649 AAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636943 3 - 190850796 ACA i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3411219 2 - 5030052 AA- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11250524 3 - 11315646 aaa i otoGar3.GL873580 I 3337 I 1 s mm10.chr8 86622115 3 - 129401213 AAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16972913 3 - 59632846 AGA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1016343 112 - 2196201 I e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=3266193.000000 s hg38.chr4_KI270789v1_alt 133914 366 + 205944 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCAGACACTGGAGAATGTGGCC-CAAGCTCA-CATGGTTCATTTCTGCAACAGCTCTTGCAATCTATACATTGTTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATGGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAGATATAAAT-CTGGCCTAAGTGAAACAAA--AAACTCTCCATTTTTAA-CTACACTTTACTGGCTCCAGGACTGGACATTTTCAGGGGTAGTATAGGGAAGGACTAAGGATATCGAGGGTTCTTGG----------ATGAAATAATACATAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAAAACAGCA-GGGCTTGA s panTro5.chr4 192921325 366 + 194502333 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCCGCTGTC--A--TATCAGACACTGGAGAATGTGGCC-CAAGCTCA-CATGGTTCATTTCTGCAACAGCTCTTGCAATCTATACATTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATTGTGGCAGGAAAGTACTCTGCTGAATGGTGAGGCAGATATAAAT-CTGGCCTAAGTGAAACAAA--AAACTCTCCATTTTTAA-CTACACTTTACTGGCTCCAGGACTGGAAATTTTCAGGGGTAGTATAGGGAAGGACTAAGGATATCGAGGCTTCTTGG----------ATGAAATAATACATAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GTGAAAACAGCA-GGGCTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192804980 366 + 195804263 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCCGCTGTC--A--TATCAGACACTGGAGAATGTGGCC-CAAGCTCA-CATGGTTCATTTCTGCAACAGCTCTTGCAATCTATACATTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATTGTGGCAGGAAAGTACTCTGCTGAATGGTGAGGCAGATATAAAT-CTGGCCTAAGTGAAACAAA--AAACTCTCCATTTTTAA-CTACACTTTACTGGCTCCAGGACTGGAAATTTTCAGGGGTAGTATAGGGAAGGACTAAGGATATCGAGGCTTCTTGG----------ATGAAATAATACATAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GTGAAAACAGCA-GGGCTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842260 366 + 4876863 GAAGTAGAAAA-GTGCTATTCCTGATTAAGCAGCTGTC--G--TATCAGACACTGGAGAATGTGGTC-CAAGCTCA-CA-GGTTCATTTCTGCAACAGCTCTTGCAGTCGATACATTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATTGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAGATATAAATCCTGGCCTAAGTGAAACAAA--AAACTCTCCATTTTTAA-CTACACTTTACTGGCTCCAGGACTGGAAATTTTCAGGGGTAGTATAGGGAAGGACTAAGGATATCGAGGGTTCTTGG----------ATGAAATAATACATAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GTGAACACAGCA-GTGCTTGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112732638 375 + 115148730 -AAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--G--TATCAGACACTGGAGAATGTAGCC-CAAGCTCA-CATGGTTCATTTCTGCAACAGCTCTTGCAATCTATAGATTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATTATGGCAGAAAAGTACTCTGCTGAGTGGTGAGGCAGATATAAAC-CTGGCCTAAGTGAAACAAA--AAACTCTCCATTTTTAA-CTACACTTTACTGGCTCCAGGACTGGAAATTTTCAGGAGTAGTATAGGGAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGCATGAAATAATACATAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GTGAACACAATA-GGGCTTGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189014936 372 + 190429646 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATCGATACAGTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AGACTCTCCATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGAAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGGATGAAATAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAACGCAATG-GGGCTTGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187957725 372 + 189454096 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATCGATACAGTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AGACTCTCCATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGAAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGGATGAAATAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAATGCAATG-GGGCTTGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349444 372 - 25927173 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATCGATACAGTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AGACTCTCCATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGAAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGGATGAAATAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAACGCAATG-GGGCTTGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379170 372 + 4669795 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATCGATACAGTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCATGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AAACTCTCCATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGAAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGGATGAAATAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAACGCAATG-GGGCTTGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134336870 370 + 135778131 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATCGATACATTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AAACTCTCCATTTGTAA--TACAC--TACTGGCTCCAGGACTGGAAATTTTCAGGAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTATGCTTGGATGAACAAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GTGAACACAATA-GGGCTTGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2790853 372 - 2847728 GAAGTAGAAAA-GTGCTATTCTTGATTAAGCAGCTGTC--A--TATCCGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCAATTTATACAGTATTGTCACCACTCTATG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAGA--AAACTCTCTATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGAAGTAGTATAGGCAAGGACTAAGGATATCGAGGGTTCTTGGGTGTGCTTGGAGGAAATAATATGTAGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAACGCAATG-GGGCTTGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905258 370 + 2368649 GAAGTAGAAAA-ACGCTATTCTTGATGAAGCAGCTGTC--G--TATCGGACACTGGAGAATGTGGGCACAAGCTCA-CATGGTTCATTTCTGCC----CCCTTGCGATCGATACATTATTGTCACCACTC--TG-G------GGAATCAA-T-GAGAATCGTGGCAGAAAAGTACTCTGCTGAATGGTGAGGCAAATATAAAC-CTGGCCTAAGTGAATCAAA--AAACTCTCCATTTGTAA--TACACTTTACTGGCTCCAGGACTGGAAATTTTCAGGAGTAGTGTAGGGAAGGACGAAGGATATCGAGGGTTCTCGGGTGTGCTTGGATGAAATAATATGTGGTGTGTTGGTCCTGGCTG---AGTGCAGAAACAA-GGGAACGCGATA-GGGCTTGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189636946 370 - 190850796 GAAGTAGAAAG-GGGCTGTTCTTGATCAAGCGGCTGTC--G--CGT----CACTGGAGAATATGCGCACAAGCTGG-CGTGGTTCATCTCTGCAGGAGTTCTTGTGATCCGCACG-CACTGTCACCACTCTG-G-G------CA-ATCGG-T-GAGAACCGTGGCGGGGAAGTACCCTGCTGAATGGCGAGGCAGATACAAAC-CCGGTCTAAGTCAATCAAA--AACGTCTCCACTTTTAA-CTGCATTTTATTGGCTCTAGGACTGGAAATTTTCAGGAATACCGTAGTGACGGACTAAGGATATCGAGGGTTCCTGTGTGCGCTTGGATGAAATAATATGTAGATAGTTGGTCCTGGCTG---AGTGCAGAAGCAG-GTGAACGCAATA-GGGCTTGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1016455 370 - 2196201 GAAGTAGAAAA-GTGCTGTTCTTGATCAAGCAGCTGTT--G--TGT----CACTGGAGAATGTGTGCACAGGCTCA-CATGGTTCATCTCTGCAAGAGTTCTTGCGATCCATACGTCACTGTCACCACTCTG-G-G------GGCATCAA-T-GGAAATCATGGCAGGAAAGTACTCTGCTGAATGGTGAGGCAGACATAAAC-CTGGTCTAAGTGAATCAAA--ATCTTCTCCATTTTAAA-CTACATTTTATTGGCTCTAGGACTGGGAATTTTCAGGAGGAGTGTAGTGACGGACTAAGGATATCGAGGGTTCCTGTGTGCACTTGGATGAAATAATATGTAGGTTGTTGGTCCTGGCTG---AGTGCAGAAACGG---GAATGCAATA-GGGCTTGA i cebCap1.NW_016107886v1 I 112 C 0 s aotNan1.NW_018492112v1 3411221 369 - 5030052 GAAGTAGAAAA-GGGCTGTTCTTGATCAAGCAGCTGTC--G--TGT----CACTGGACAATGTGTGCACAAGCTCG-CATGGTTCATCTCTGCAAGAGTTCTTGCGATCCATATGTTACTGTCACCATTCTGTG-G------GGCATCAA-T-GAGAATCATGGCAGGAAAGTACTCTGCTGAATGGTGAGGCAGATGTAAAC-CTGGTCTAAGTGAATCAAA--AACTTCTCCATTTTTAA-CTACATTTTATTGGCTCTAGGACTGGAAATTTTCAGGAGTAGTATAGTGACGGACTAAGGATGTCGAGGGTTCTTGTGTGTGCTTGGATGAAATAA----TAGATTGTTGGTCCTGGCTG---AGTGCAGAAACAG-GTGAATGCAATC-GGGCTTGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11250528 363 - 11315646 GAAATAGAAGC-CTGCTATCTTTTATTAAGGGGCTGTC--ACGTGTCAGATGGTGGAAAATGTATGCACA-GCTCATCATGATTGATCTTTGCCACATCTTTTACAATCTATATATTCATGTCACCTTTCTGTG-GGTATGAGGAGTCAG-A-TGAGATCATGGGAGCAAGGAAGCTTG-TAAATGTTGAGGCAGGTGTAATC-TTGGTCTTGGAGATTCAAA--GAAG--TTCATTTTAAA-TTACA--------AATGCAGG----------CTCAGGAGAGGTACCGTAAAGGACTAAGGATATGGAAATATCTAGTGTACGTCTGGATGAAATAATTCATAGACCACTATTCTTGGCTG---G--GCAGAGATTGCAGGAATCCAACACTGGCTAG- i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86622118 368 - 129401213 ACAATAGAAAAGGTTTTATGGTTCAGTGAGAAGCTTTCTTG--TATTAGACACTATTGGATGAATGTATAGATTCATCATACTTTATCTGTGCAGCATCTCTAGTAATCTATGCATTAAAATCATCACCATATGTA------GGAGTCAACT-GAGGCTTG----------ATATATCGTTAAACAGCAAG---------AAA-CAGGTGTTAGGAGTTCAAATCAAAGTCTACGTCTTAAAGTTAGGCTGTGTCAGCTCTAGGACTCGGCATTTTCAGAAA-AGTACAGTGAAAGG--AAGGCTGTTGATGGTTCTACCAATCATTTGGGTAAAAAAATGCACACACCACCAGTCCTTGGTGGGAAGAGGAGGGACTT-GTGAATAGAATATGGGCTTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16972916 354 - 59632846 --------AAA-GTGCTAACATTTATTGAATAGCTGCC--A--TTCCT----------AACGTGTAGACAAACTCATCACAGTTAATTTTTGTGACTTCTCTTGCAATCTATAAATTATAGTCACTATTCTATGAG------AGGATCAA-TCGAGGATAATGGTACCCAGATACTTTGCTAAATAGTAGGG----TATCATC-CCTGTCTAAAGGGAACCAC--AAATTCTCCATTTTTAA------CTATGCTCGTTCCAGAACTGGGAATTTTCAGGAAAAGTATAGTGAAAGACTAAGGAGATGATGAGTTCTTGTGTGTATTTGGATGAAACTATATATAGGCTATTAATCCTGACAG---GGTGGAGAAACAA-GTCAATCCAATGCCGGCTTTA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17523392 803 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=441479.000000 s hg38.chr4_KI270789v1_alt 134280 40 + 205944 AAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA s panTro5.chr4 192921691 40 + 194502333 AAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805346 40 + 195804263 AAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842626 40 + 4876863 AAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733013 40 + 115148730 AAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015308 40 + 190429646 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958097 40 + 189454096 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349816 40 - 25927173 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379542 40 + 4669795 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337240 40 + 135778131 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791225 40 - 2847728 CAGCTTAGGAG-AAAATGGAGGAAGGCAAGAGGTTGGAGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905628 40 + 2368649 CAGCTTAGGAG-AAAATGGAGGGAGGCAAGAGGTTGGAGGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189637316 22 - 190850796 CAGCTCAGGAG-AAAG------------------TGGAGGA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1016825 39 - 2196201 CTGCTTAGGAG-ACAGTGGAGGAAGGC-AGAGGCTGGAGGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3411590 40 - 5030052 CAGCTTAGGAG-AAAGTGGAGGAAGGCAAGAGGTTGGAGGA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17524195 40 - 93316391 AAGCTGAGGAT-AAAATGGAAGGAGGCGAGAGGTTGGAGGA i micMur3.chr14 I 803 I 761 s otoGar3.GL873580 11250891 41 - 11315646 AAGCGTAGGATAAAAATGGTGGGAGGTGAGGGGTTGGAGCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86622486 40 - 129401213 TTGTTTAGGAC-AAAATATGAGGAGGTAATTTCTTGTAATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16973270 40 - 59632846 CGGCATGGTAT-AAATTGAAGGAAATCAAGAGGTTGGAGGA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=1266503.000000 s hg38.chr4_KI270789v1_alt 134320 129 + 205944 CTTAGTGGATTCATGGAGAACAAATAGAAATACGGAAGTTAGAAG---GAG---AGTG------ATAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- s panTro5.chr4 192921731 129 + 194502333 CTTAGTGGATTCATGGAGAACAAATAGAAATACGGAAGTTAGAAG---GAG---AGTG------ATAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805386 129 + 195804263 CTTAGTGGATTCATGGAGAACAAATAGAAATACGGAAGTTAGAAG---GAG---AGTG------ATAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842666 129 + 4876863 CTTAGTGGATTCATGGAGAACAAATGGAAATACGGAAGTTGGAAG---GAG---AGTG------ATAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGATTGC-TGAAGAAGAGATAAT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733053 129 + 115148730 CTTAGTGGATTCATGGAGAACAACTGGAAATACGGAAGTTAGAAG---GAG---AGTG------GTAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015348 129 + 190429646 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958137 129 + 189454096 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349856 129 - 25927173 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379582 129 + 4669795 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337280 129 + 135778131 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---AATG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791265 129 - 2847728 CTTAGTGGATTCATGGAGAACAAATGGAAATATGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905668 129 + 2368649 CTTAGTGGCTTCATGGAGAACAAATGGAAATACGGAAGGTAGAAG---GAG---ACTG------AGAAGAGGCAAGGC-AAAG-TAGGTGATGAAATTACCCAAAGTGTGACTCTGGGATTGGGCTGC-TGAAGAAGAGATAAT--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189637338 128 - 190850796 CTCAGTGGTTTCATGGAAAACAGAAGGAAATGCGGAAGTTAGAAG---GCG---AGTA------ATAAGAGGCGGGGC--GAG-TCGGTGATGAAATTACCCAGAGTCTGACTCTGGGATTGGGTTGC-TGAAGAAGAGATAAT--- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1016864 128 - 2196201 CTCAGTGGATTCATGGAAAACGGGTGGAAATACAGAAGTTAGAAG---GCG---AGTA------ATAAGAGGCGGGGC--AAG-TAGGTGATGAAATTACCCAAAGTATGACTCTGGGATTGGGTTGC-TGAAGAAGAGATCAC--- i cebCap1.NW_016107886v1 C 0 I 295 s aotNan1.NW_018492112v1 3411630 128 - 5030052 CTCAGTGGATTCATGGAAAACAGATGGAAATATGGAAGTGAGAAG---GCG---AGTA------ATAAGAGGCAGGGC--AAG-TAGGTGATGAAACTACCCAAAGTATGACTCTGGGATTGGGCTGC-TGAAGAAAAGATAAT--- i aotNan1.NW_018492112v1 C 0 I 298 s otoGar3.GL873580 11250932 113 - 11315646 --------CTTCC----------ACAGGAATACAGAAGCCACAAGAGAGAA---ATGA------TTAGGCGGCAAAGC-AGAG--AGATGACGAATCAATCCAGAGTATGGCTGTGGGATTAGGTTGC-TATAGGAGGACAGat--- i otoGar3.GL873580 C 0 I 3 s mm10.chr8 86622526 132 - 129401213 TGTGGTTAGTTTATGGAGGGCAAGTAAGAACTTGGGTAGTAGTAG---GAGAACAGCA------GTAAGAGACTGAAC-AGTGCTAAGTGATAAAATGATCCAAAGTATGGCTCTGGG-TTTGGCTCT-TATGAGAGAACTGGT--- i mm10.chr8 C 0 I 3 s canFam3.chr16 16973310 139 - 59632846 AAAAGTGAACTCGTGGAGAACAAGTGGGTATACAGAAGTT-GAAG---AAG---AGTGTAAAAATTAAGAGGCAAAACCATGG-TAAGTGATAAAATGGTCCAAAACGTGACTTCGGATGTGGGTTACACAAAGAAGAACAGATGTA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=45714.000000 s hg38.chr4_KI270789v1_alt 134449 4 + 205944 AAAT s panTro5.chr4 192921860 4 + 194502333 AAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805515 4 + 195804263 AAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842795 4 + 4876863 AAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733182 4 + 115148730 AAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015477 4 + 190429646 AAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958266 4 + 189454096 AAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349985 4 - 25927173 AAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379711 4 + 4669795 AAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337409 4 + 135778131 AAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791394 4 - 2847728 AAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905797 4 + 2368649 AAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189637466 4 - 190850796 GAAT i calJac3.chr3 C 0 I 287 s cebCap1.NW_016107886v1 1017287 4 - 2196201 aaaT i cebCap1.NW_016107886v1 I 295 C 0 s aotNan1.NW_018492112v1 3412056 4 - 5030052 aaaT i aotNan1.NW_018492112v1 I 298 C 0 s otoGar3.GL873580 11251048 3 - 11315646 -aat i otoGar3.GL873580 I 3 I 1 s mm10.chr8 86622661 4 - 129401213 AGGT i mm10.chr8 I 3 C 0 s canFam3.chr16 16973449 4 - 59632846 AAGT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=3213141.000000 s hg38.chr4_KI270789v1_alt 134453 315 + 205944 TCTTTAAAGTAAGTAagagtggtgaagtgcttatcccatgtgactt--attagagacagaatctgaaatataatttggg---tttacattatgaaatttagtgcattatgccataag--------------------------------------------------------------------------------------------------aatgct--gt----gtctccTAATCCATTATGTTCGTTAAGGTGGAGCTTTACATGTGTCTTGATATCTGAGTATAATCTTTTGCAATAAATT-------ACAGAAGTT---GTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCTAAGTTTATAAAATGA-AAGTCTTGAT---TTTTGTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA s panTro5.chr4 192921864 315 + 194502333 TCTTTAAAGTAAGTAagagtggtgaagtgcttatcccatgtgactt--attagagacagaatctgaaatataatttggg---ttcacattatgaaatttagtgcattatgccataag--------------------------------------------------------------------------------------------------aatgct--gt----gtctccTAATCCATTATGTTCATTAAGGTGGAGCTTTACATGTGTCTTGATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTT---GTTTCATCACTAATTTGAGGTGTGCTGATTTTGTTTCTAAGTTTATAAAATGA-AAGTCTTGAT---TTTTGTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805519 315 + 195804263 TCTTTAAAGTAAGTAagagtggtgaagtgcttatcccatgtgactt--attagagacagaatctgaaatataatttggg---ttcacattatgaaatttagtgcattatgccataag--------------------------------------------------------------------------------------------------aatgct--gt----gtctccTAATCCATTATGTTCATTAAGGTGGAGCTTTACATGTGTCTTGATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTT---GTTTCATCACTAATTTGAGGTGTGCTGATTTTGTTTCTAAGTTTATAAAATGA-AAGTCTTGAT---TTTTGTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3842799 298 + 4876863 TCTTTAAAGTAAGTA-----------------ATCCCATGTGACTG--ATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTAGTACATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----CTCCCCTAATCCATTATGTTCATTAAGGTGGAGCTTTACATGTGTCTTGATATCTGAGTATAATCTTATGCAATAAATT-------ACAGAAGTT---GTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCTAAGTTTATAAAATGA-AAGTCTTGAT---TTTTTTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733186 317 + 115148730 TCTTTAAAGTAAGTAAGAGTGGTGAAGTGCTTATCCCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTAGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT-----TCTCCTAATCCATTATGTTCATTACGGTGGAACTTTACATGTGTCTTGATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTAGTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCTAAGTTTATAAAATGA-AAGTCTTGAT---TTTTGTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015481 320 + 190429646 TATTTAAAGTAAGTAAGAGTGGTAAATTGCTTATCCCATGTGACTTTAATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATGAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958270 320 + 189454096 TCTTTAAAGTAAGTAAGAGTGGTAAATTGCTTATCCCATGTGACTTTAATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATGAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24349989 320 - 25927173 TCTTTAAAGTAAGTAAGAGTGGTAAATTGCTTATCCCATGTGACTTTAATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATGAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3379715 318 + 4669795 TCTTTAAAGTAAGTAAGAGTGGTAAATTGCTTATCCCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACATTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATAAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337413 314 + 135778131 TCTTTA----AAGTAAGAGTGGTGAATTGCTTATCCCATGTGACTT--ATTAGAGACAGAATTTGAAATATAATTTGGG---TTTACATTATGGAATTTGGTGTATTATGCCATAAC--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTGTGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATAAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791398 318 - 2847728 TCTTTAAAGTAAGTAAGAGTGGTAAATTGCTTATCCCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATATGGG---TTTACATTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACATGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAATTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATAAAATGA-AAGTCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCGGTTCAAGAGCAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 905801 318 + 2368649 TCTTTAAAGTAAGTAAGAGTGGTGGAGTGCTTATCCCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATTTGGG---TTTACTTTATGAAATTTGGTGCATTATGCCATAAG--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCTTAATCCATTATGTTCATTAAGGTGGAACTTTACGTGTGTCTCAATATCTGAGTATAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACCAGTTTGGGGTGTGCTGATTTTGTTTCCAAGTTTATAAAATGA-AAATCTTGAT---TGTTGTTGGTTAAATATTTGGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189637757 313 - 190850796 TCTT-----TAAGTAAGAGTGGTGAAATGCTTATCGCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATTTGGG---GTTCCGTTATGAAATTGAGTGCATTATGCCTTAAA--------------------------------------------------------------------------------------------------AATGCT--GT----GTCTCATAACCCGCTATGTTCATTAAGGTGGAAATTTCCATGCGTCTTGATATCTGAGTGTAATCTTATGCAATAAATA-------ACAGAAGTTGTATTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCCAAATTTGTAAAATGA-AAGTATTGAT---TTTTGTTGGTTAAGTATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i calJac3.chr3 I 287 C 0 s cebCap1.NW_016107886v1 1017291 318 - 2196201 TCTTTAAAGTAAGTAAGAATGGTGAAATGCTTATCCCATGTGACTT--ATTAGAGACAGAATCTGAAATATAATTTGGG---TTTCCGTTATGAAATTTAGTGCATTATGCCTTAAA--------------------------------------------------------------------------------------------------AATGCG--GT----GTCTCATAACCCATTATGTTCATTAAGGTGGAACTTTACATTCGTCTTGAAATCTGAGTATAATCTTATGTAATAAATA-------ACAGAAGTTGTATTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCCAAATTTGTAAAATAA-AAGCCTTGAT---TTTTGTTGCTTAAATATTTTGAAAAAT-----------------------------TACAGTTCAAGAGCAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412060 318 - 5030052 TCTTTAAAGTAAGTAagagtggtgaaatgcttatcccatgtgactt--attagggacagaatctgaaatataatttagg---tttccgttatgaaatttagtgcattatgccttaaa--------------------------------------------------------------------------------------------------aatgct--gt----gtctcATAACCCACTATGTTCATTAAGGTGGAACTTTACATGCGTCTTGATATCTGAGTATAATCTTTTGCAATAAATA-------ACAGAAGTTGTATTCTCATCACTAATTTGGGGTGTGCTGATTTTGTTTCCAAATTTGTAAAATGA-AAGTCTTGAT---TTTTGTTGGTTAAATATTTTGAAAAAT-----------------------------TGCAGTTCAAGAGCAAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11251052 339 - 11315646 tttttaaaataaataGGGGTGGTGAAGTGCTTACCCTGTGTGACCC--ACTAGAGA-AGGGCCTCAAAAATAACCTGGGTCTTTTACATTACAAAGTTTCTTGCTTCATGCCATAA---------------------------------------------------------------------------------------------------AATGCCTAGT----TTCTCATAA----TTGCTTTCATTAAAATGGAATTTTATAGGTATCTTGGCATCTAAGTCTTATCTTATGGAAGAAATA-------AT-----TTATATTCTCATCACTAATTTGAGATGCATTGATTTTGTTTGCAAATTTGCAAAATGACAAGTCTTGACTTATTTTGTTGGTTAAATAGTTTGAAAAATGTAATGATG------TGATGTAACAAAACCACACTTTAAGAGCAAA i otoGar3.GL873580 I 1 I 1 s mm10.chr8 86622665 447 - 129401213 TCTTTAAAATA---AAGAGAGGAGAAGTACTTAGACCCC-TAACTC--ATTGGGGGTAGAGAATGAAAGA-AATTTGAGTCCTTTATATTAGTAGGTATAGTGTGTTGTATAATAAAAACTATGAATGTTTTTggatgtgggtacagttcagggttacaattgtcaagcaagtacaaagtcctgggttcagtctctagacacacataaaaaaattaatgat--gtgtacgtttcataatccACCGTATTGCCTCAAATGGAATTTCACACATATTTTGGAATCTGAGCATTCTTTTGTGGAACGAACACATTAGGAAGTAAGTTATAGTCTTATAACTGACTTGGGAAATATTCA-TTTAATTCTATCTTTATAAAATGA-CAATCTTAAC---TTTTCTTGCCTAAATAGTTTGAATGATGTCATTATA------TAATTTAACACAACTGAAGTTATAGAACACT i mm10.chr8 C 0 C 0 s canFam3.chr16 16973453 338 - 59632846 TCTTTAAAATAAGTAGAAGTGGTGAAGTATTTATTCCATGTGACTC--ATTAGTGATATAGTCTGAAAAATAATTGGGT-CTTTTACATTGTATAGTTCACTGCTTCATGACATAAA--------------------------------------------------------------------------------------------------AGTGCT--CA----GTGTCTCAATCTATTATGTTCATTAAGATAGAACAGTACATATATCTTGGTATCTGATTATTATTGTCTAGAATAATTA------------AGTTATATTCTCACCACTAGTTTGTGAGGTATTGATTTTATTTCCAAATTTGTAAAACGA---GTCT-------TATTATTGGTTAACTATTTTGAAAAATGTAATGAGGTAAAGTTAATGTAGCACAACTGCAGTCCCAGAACAAA i canFam3.chr16 C 0 I 185 e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=304119.000000 s hg38.chr4_KI270789v1_alt 134768 37 + 205944 GTTATG---TTTTACTCA------------TCAG-TTTTTTGAATGAAAAATT s panTro5.chr4 192922179 37 + 194502333 GTTATG---TTTTACTCA------------TCAG-TTTTTTGAATGAAAAATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805834 37 + 195804263 GTTATG---TTTTACTCA------------TCAG-TTTTTTGAATGAAAAATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843097 37 + 4876863 GTTATG---TTTTACTCA------------TCAG-TTTTTTGAATGAAAAATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733503 37 + 115148730 GTTATG---TTTTACTCA------------TCAG-TTTTTTGAATGAAAAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015801 40 + 190429646 GTTATG-TTTTTTACTCA------------TCAGATTTTTTGAATGAAAAATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958590 40 + 189454096 GTTATG-TTTTTTACTCA------------TCAGATTTTTTGAATGAAAAATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350309 40 - 25927173 GTTATG-TTTTTTACTCA------------TCAGATTTTTTGAATGAAAAATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380033 40 + 4669795 GTTATG-TTTTTTACTCA------------TCAGATTTTTTGAATGAAAAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337727 40 + 135778131 GTTATG-TTTTTTACTCA------------TCAAATTTTTTGAATGAAAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791716 40 - 2847728 GTTATG-TTTTTTACTCA------------TCAGATTTTTTGAATGAAAAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906119 41 + 2368649 GTTATGTTTTTTTACTCA------------TCAGGTTTTTTGAATGAAAAATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638070 36 - 190850796 GCTATG---TTTCATTCA------------TCAG-CTTTTGGAATG-AAAAAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017609 37 - 2196201 GTTATG---TTTTATTCA------------TCGG-TTTTTGGAATGAAAAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412378 37 - 5030052 GTTATG---TTTTATTCA------------TCAG-TTTTTGGAATGAAAAAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11251392 50 - 11315646 GGTGTA---TTTTGCACAGAGATAACCTATTTAGGCTTTTTGAATAAGAAGTT i otoGar3.GL873580 I 1 I 500 s mm10.chr8 86623112 34 - 129401213 CTAAGA---TTTTATTTT------------ACAA----TATGAATGAAATATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16973976 46 - 59632846 GTTGTA---GTTCATTCAAAGGTAAAT---TCAG-TTTTTAGAATCAAGGATT i canFam3.chr16 I 185 C 0 e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=845330.000000 s hg38.chr4_KI270789v1_alt 134805 88 + 205944 ATGTGAACGAGATAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTAAAGTTACTTAAGTTATGTTTATTCTCCAAAATATTATCAGTCACA s panTro5.chr4 192922216 88 + 194502333 ATGTGAACGAGATAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTAAAGTTACTTAAGTTATGTTTATTCTCCAAAATATTATCAGTCACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805871 88 + 195804263 ATGTGAACGAGATAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTAAAGTTACTTAAGTTATGTTTATTCTCCAAAATATTATCAGTCACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843134 88 + 4876863 ATGTGAACGAGATAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTAAAGTTACTTAAGTTATGTTTATTCTCCAAAGTATTATCAGTCACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733540 83 + 115148730 ATGTGAACAAGATAACTTTTGT-----ATGAA------TTTTTAATTCTTAGTAAAGTTAC-----TTATGTTTATTCTCCGAAATATTATCAGTCACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015841 88 + 190429646 ATGTGAACAAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATGTTTATTCTCTAAAATATTATCAGTCACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958630 88 + 189454096 ATGTGAACAAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATGTTTATTCTCTAAAATATTATCAGTCACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350349 88 - 25927173 ATGTGAACAAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATGTTTATTCTCTAAAATATTATCAGTCACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380073 88 + 4669795 ATGTGAACGAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATATTTATTCTCTAAAATATTATCAGTCACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337767 86 + 135778131 ATGTGAATGAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAATTACTT--GTTATGTTTATTCTCCAAAATATTATCAGTCACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791756 88 - 2847728 ATGTGAACGAGGTAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATGTTTATTCTCTAAAATATTATCAGTCACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906160 88 + 2368649 ATGTGAACGAGATAACTTTTGT-----ATAAA------TTTTTAATTTTTAGTGAAGTTACTTAAGTTATGTTTATTCTCCAAAATATCATCAGTCACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638106 82 - 190850796 ATGCAAATGAGATAACTTTTGT-----ATGAG------TTTTTAATTTTTAGTAAAGTT------GTTATGCTTATTCTCCAAAATATTATCAGTCACA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017646 88 - 2196201 ATGCGAATGAGATAACTTTTGT-----ATGAA------TTTTTAATTTTTAGTAAAGTTACTTAAGTTACGCTTATTCTCCAAAATATTATCAGTCACA i cebCap1.NW_016107886v1 C 0 I 119 s aotNan1.NW_018492112v1 3412415 88 - 5030052 ATGTGAATGAGATAACTTTTAT-----ATGGA------TTTTTAATTTTTATTTAAGTTACTTAAGTTATGCTTCTTCTCCAAAATATTATCAGTCACA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86623146 92 - 129401213 ACAAGAATGAGGtaatttttattattaattat------ttctttattttCAG-GAAATTATCTAATTTCCATTTGTTCTTTAAAGCATCATTTCTCATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16974022 91 - 59632846 ATGTGAATGAGTTAACTTTTAT-----ATGAATAATTTTTTTTCAATTTGAGTAAGCTTATGTAACTTATGTTTCTTCATTAAGAT---ATCAATCTCA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=21840.000000 s hg38.chr4_KI270789v1_alt 134893 2 + 205944 TT s panTro5.chr4 192922304 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805959 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843222 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733623 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189015929 2 + 190429646 TT i rheMac8.chr5 C 0 I 136 s macFas5.chr5 187958718 2 + 189454096 TT i macFas5.chr5 C 0 I 122 s macNem1.NW_012013133v1 24350437 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 I 124 s cerAty1.NW_012001672v1 3380161 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 I 124 s chlSab2.chr7 134337853 2 + 135778131 TT i chlSab2.chr7 C 0 I 128 s manLeu1.NW_012102221v1 2791844 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 I 124 s colAng1.NW_012116221v1 906248 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 I 136 s calJac3.chr3 189638188 2 - 190850796 TT i calJac3.chr3 C 0 I 445 s aotNan1.NW_018492112v1 3412503 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 I 121 s mm10.chr8 86623238 2 - 129401213 TT i mm10.chr8 C 0 I 1360 s canFam3.chr16 16974113 2 - 59632846 TT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1017734 119 - 2196201 I e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=27042.000000 s hg38.chr4_KI270789v1_alt 134895 42 + 205944 TATTTAGTGCTCAAGACT------AAATAAGAAt-tttagacagattct s panTro5.chr4 192922306 42 + 194502333 TATTTAGTGCTCAAGACT------AAATAAGAAt-tttagacagattct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192805961 42 + 195804263 TATTTAGTGCTCAAGACT------AAATAAGAAt-tttagacagattct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843224 42 + 4876863 TATTTAGTGCTCAAGACT------AAATAAGAAt-tttagacagattct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733625 48 + 115148730 TATTTAGTGCTCAAGACTACTGTCAAtttttttt-tttttttagagtct i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 16974115 34 - 59632846 ---------GAAGAGACT------ATAGAAATATGCTTTAAAAGATTCT i canFam3.chr16 C 0 I 100 e calJac3.chr3 189638190 445 - 190850796 I e cebCap1.NW_016107886v1 1017734 119 - 2196201 I e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86623240 1360 - 129401213 I e aotNan1.NW_018492112v1 3412505 121 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e manLeu1.NW_012102221v1 2791846 124 - 2847728 I e chlSab2.chr7 134337855 128 + 135778131 I e cerAty1.NW_012001672v1 3380163 124 + 4669795 I e macNem1.NW_012013133v1 24350439 124 - 25927173 I e macFas5.chr5 187958720 122 + 189454096 I e rheMac8.chr5 189015931 136 + 190429646 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=217922.000000 s hg38.chr4_KI270789v1_alt 134937 255 + 205944 cgctctgtcgcccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgccattctcctgcctcagcctcccaagtagctgcaactacaggcgcccaccaccatgcccggctaattttttcgtattttagtagagacagggtttcaccgtgttagccaggatggtcttgatatcctgacctcgtgatctgcctgcctc----------ggcctcctagagtgctgggattacaggcgtgagc s panTro5.chr4 192922348 255 + 194502333 cgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaagctcagcctcctgggttcacgccattctcctgcctcagcctcccaagtagctgcaactacaggcgcccgccaccacgcccggctaatttttttgtattttagtagagacagggtttcactgcgttagccaggatggtcttgatctcctgaactcgtgatctgcccgcctc----------ggcctcccagagtgctgggattacaggcgtgagc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806003 255 + 195804263 cgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaagctcagcctcctgggttcacgccattctcctgcctcagcctcccaagtagctgcaactacaggcgcccgccaccacgcccggctaatttttttgtattttagtagagacagggtttcactgtgttagccaggatggtcttgatctcctgaactcgtgatctgcccgcctc----------ggcctcccagagtgctgggattacaggcgtgagc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843266 255 + 4876863 cgctctgtcacccaggctggagtgcagtgacgtgatctcggctccctgcaagctctgcctcctgggttcacgccattctcctgcctcagcctcccaagtagctgcaactacaggcgcccgccaccatgcccagctaatttttttgtattttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatctgcctgcctc----------ggcctcctagagtgctgggattacaggcgtaagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733673 265 + 115148730 cgctctgtcgcccaggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccgggttcacgcatttctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacgcccggcaaattttttgtatttttagtagagacggggtttcaccgtgttagccgggatggtctccatctcctgacctcgtgatctgcccgcctccacccgccttggcctcccaaagtgctgggattacaggcatgagc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189638190 445 - 190850796 I e cebCap1.NW_016107886v1 1017734 119 - 2196201 I e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e canFam3.chr16 16974149 100 - 59632846 I e mm10.chr8 86623240 1360 - 129401213 I e aotNan1.NW_018492112v1 3412505 121 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e manLeu1.NW_012102221v1 2791846 124 - 2847728 I e chlSab2.chr7 134337855 128 + 135778131 I e cerAty1.NW_012001672v1 3380163 124 + 4669795 I e macNem1.NW_012013133v1 24350439 124 - 25927173 I e macFas5.chr5 187958720 122 + 189454096 I e rheMac8.chr5 189015931 136 + 190429646 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=7189.000000 s hg38.chr4_KI270789v1_alt 135192 11 + 205944 cacggtgcctg s panTro5.chr4 192922603 11 + 194502333 caccgtgcctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806258 11 + 195804263 caccgtgcctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843521 11 + 4876863 caccgtgcctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733938 11 + 115148730 caatgcactcg i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 16974249 11 - 59632846 CAAGGTAACCA i canFam3.chr16 I 100 I 1 e calJac3.chr3 189638190 445 - 190850796 I e cebCap1.NW_016107886v1 1017734 119 - 2196201 I e micMur3.chr14 17524235 761 - 93316391 I e dasNov3.JH570353 1469783 2245 - 2520184 I e mm10.chr8 86623240 1360 - 129401213 I e aotNan1.NW_018492112v1 3412505 121 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e manLeu1.NW_012102221v1 2791846 124 - 2847728 I e chlSab2.chr7 134337855 128 + 135778131 I e cerAty1.NW_012001672v1 3380163 124 + 4669795 I e macNem1.NW_012013133v1 24350439 124 - 25927173 I e macFas5.chr5 187958720 122 + 189454096 I e rheMac8.chr5 189015931 136 + 190429646 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=1556.000000 s hg38.chr4_KI270789v1_alt 135203 2 + 205944 gc s panTro5.chr4 192922614 2 + 194502333 gc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806269 2 + 195804263 gc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843532 2 + 4876863 gt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733949 2 + 115148730 gc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187958842 2 + 189454096 GT i macFas5.chr5 I 122 C 0 s calJac3.chr3 189638635 2 - 190850796 GT i calJac3.chr3 I 445 C 0 s cebCap1.NW_016107886v1 1017853 2 - 2196201 GC i cebCap1.NW_016107886v1 I 119 C 0 s canFam3.chr16 16974261 1 - 59632846 G- i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1472028 2 - 2520184 GT i dasNov3.JH570353 I 2245 C 0 e micMur3.chr14 17524235 761 - 93316391 I e mm10.chr8 86623240 1360 - 129401213 I e aotNan1.NW_018492112v1 3412505 121 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e manLeu1.NW_012102221v1 2791846 124 - 2847728 I e chlSab2.chr7 134337855 128 + 135778131 I e cerAty1.NW_012001672v1 3380163 124 + 4669795 I e macNem1.NW_012013133v1 24350439 124 - 25927173 I e rheMac8.chr5 189015931 136 + 190429646 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=22316.000000 s hg38.chr4_KI270789v1_alt 135205 3 + 205944 cAA s panTro5.chr4 192922616 3 + 194502333 cAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806271 3 + 195804263 cAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843534 3 + 4876863 cAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733951 3 + 115148730 cAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016067 3 + 190429646 CAA i rheMac8.chr5 I 136 C 0 s macFas5.chr5 187958844 3 + 189454096 CAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350563 3 - 25927173 CAA i macNem1.NW_012013133v1 I 124 C 0 s cerAty1.NW_012001672v1 3380287 3 + 4669795 CAA i cerAty1.NW_012001672v1 I 124 C 0 s manLeu1.NW_012102221v1 2791970 3 - 2847728 CAA i manLeu1.NW_012102221v1 I 124 C 0 s calJac3.chr3 189638637 3 - 190850796 CAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017855 3 - 2196201 CAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412626 3 - 5030052 CAA i aotNan1.NW_018492112v1 I 121 C 0 s canFam3.chr16 16974263 2 - 59632846 CA- i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1472030 3 - 2520184 CAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17524235 761 - 93316391 I e mm10.chr8 86623240 1360 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e chlSab2.chr7 134337855 128 + 135778131 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 135208 1 + 205944 T s panTro5.chr4 192922619 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806274 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843537 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733954 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016070 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958847 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350566 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380290 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337983 1 + 135778131 T i chlSab2.chr7 I 128 C 0 s manLeu1.NW_012102221v1 2791973 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189638640 1 - 190850796 T i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017858 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412629 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1472033 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17524235 761 - 93316391 I e canFam3.chr16 16974265 1 - 59632846 I e mm10.chr8 86623240 1360 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=59287.000000 s hg38.chr4_KI270789v1_alt 135209 7 + 205944 TTTTTTA- s panTro5.chr4 192922620 7 + 194502333 TTTTTTT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806275 7 + 195804263 TTTTTTT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843538 7 + 4876863 TTTTTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733955 7 + 115148730 ATTTTTT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016071 7 + 190429646 TTTTTTT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958848 7 + 189454096 TTTTTTT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350567 7 - 25927173 TTTTTTT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380291 7 + 4669795 TTTTTTT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337984 7 + 135778131 TTTTTTT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791974 7 - 2847728 TTTTTTT- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189638641 7 - 190850796 TTTTTTT- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017859 7 - 2196201 TATTTTA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412630 7 - 5030052 TTTTCTT- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17524996 7 - 93316391 TTTTTTT- i micMur3.chr14 I 761 C 0 s canFam3.chr16 16974266 6 - 59632846 -TTTTTT- i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1472034 7 - 2520184 -TCTTTTA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86623240 1360 - 129401213 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=1132.000000 s hg38.chr4_KI270789v1_alt 135216 1 + 205944 -A s panTro5.chr4 192922627 1 + 194502333 -A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806282 1 + 195804263 -A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843545 1 + 4876863 -T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733962 1 + 115148730 -A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016078 1 + 190429646 -A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958855 1 + 189454096 -A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350574 1 - 25927173 -A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380298 1 + 4669795 -A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337991 1 + 135778131 -A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791981 1 - 2847728 -A i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189638648 1 - 190850796 -A i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017866 1 - 2196201 -A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412637 1 - 5030052 -A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17525003 1 - 93316391 -A i micMur3.chr14 C 0 C 0 s mm10.chr8 86624600 1 - 129401213 -A i mm10.chr8 I 1360 C 0 s canFam3.chr16 16974273 1 - 59632846 -A i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1472041 1 - 2520184 C- i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 906250 136 + 2368649 I e otoGar3.GL873580 11251442 500 - 11315646 I a score=1034175.000000 s hg38.chr4_KI270789v1_alt 135217 97 + 205944 AATTATGAAACTAGGAAACATTGTTCTATTA-AAA-ATAT--TTTTCTCTATCTATTCACAGTAACACTGAAGAATGCAGTTTACTTACATC---TTTTTCTGT s panTro5.chr4 192922628 97 + 194502333 AATTATGAAACTAGGAAACATTGTTCTATTA-AAA-ATAT--TTTTCTCTATCTATTCACAGTAACACTGAAGAATGCAGTTTACTTACATC---TTTTTCCGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806283 97 + 195804263 AATTATGAAACTAGGAAACATTGTTCTATTA-AAA-ATAT--TTTTCTCTATCTATTCACAGTAACACTGAAGAATGCAGTTTACTTACATC---TTTTTCCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843546 97 + 4876863 AATTATGAAACTAGGAAACATTGTTCTATTA-AAA-ATAT--TTTTCTCTGTCTATTCACAGTAACACTGAAGAATGCAGTTTACTTACATG---TTTTTCTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112733963 97 + 115148730 AATTATGAAACTAGGAAATATTGTTGTATTA-AAA-ATAT--TTTTCTCTAGCTATTCACAGTAACACTGAAGAATGCATTTTACTTACATC---TTTTTCTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016079 97 + 190429646 AATTATGAAACTAGGAATCATTGTTCTATTA-AAA-GTAT--TTTTCTCTAACTATTCACAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958856 97 + 189454096 AATTATGAAACTAGGAATCATTGTTCTATTA-AAA-GTAT--TTTTCTCTAACTATTCATAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350575 97 - 25927173 AATTATGAAACTAGGAATCATTGTTCTATTA-AAA-GTAT--TTTTCTCTAACTATTCACAGTAACACTCAACAATGCAGTTTACTTACATC---TTTTTCTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380299 97 + 4669795 AATTATGAAACTAGGAACCATTGTTCTATTA-AAA-GTAT--TTTTCTCTAACTATTCACAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134337992 97 + 135778131 AATTATGAAACTAGGAATCATTGTTCTGTTA-AAA-GTAT--TTTTCTCTAGCTATTCACAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2791982 97 - 2847728 AATTATGAAACTAGGAATCATTGTTCTATTA-AAA-GTAT--TTTTCTCTAACTATTCACAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906386 97 + 2368649 AATTATGAAACTAGGAATCATTTTTCTATTA-AAA-GTAT--TTTTCTCTAGCTATTCACAGTAACACTGAACAATGCAGTTTACTTACATC---TTTTTCTGT i colAng1.NW_012116221v1 I 136 C 0 s calJac3.chr3 189638649 98 - 190850796 AATTCTGAAACTAGTAAATACTGTTCTATTAAAAA-GTAT--TTATGTTTAGCTCTTCACAGTAACGTTGAAGAATGCAGTTTACTTACGTC---TTTTTCTGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017867 98 - 2196201 AATTTTGAAACTAGGAAATATTGTTCTATTAAAAA-ATGT--TTATCTTTAGCTATTCACAGTAATATTGAAGAATGCAGTTTACTTACATC---TTTTTCTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412638 98 - 5030052 AATTTTGAAACAAGGAAATATTGTTCTATTAGAAA-ATAT--TTATGTTTAGCTATTCACAGTAACATTGAAGAATGCAGTTTACTTACATC---TTTTTCTGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17525004 98 - 93316391 AATTATGAAGTTAGGAAATATTTTCATATTA-AAATATAT--TTCCCTTTAGCTATTCACAATAATATTGATGAGTGAAGTTTACTTACATC---TTTTTCTGT i micMur3.chr14 C 0 I 74 s mm10.chr8 86624601 87 - 129401213 AAATATTAGCCTAG-AAATGTCTTTATATTA-AAATCTAT--TTCCCTT-------------TCACACTGAAGAATGAAGTTAGCTTAAATCAGACATGCCAGT i mm10.chr8 C 0 I 1 s canFam3.chr16 16974274 98 - 59632846 AATTATGACACTAGGaaatatttttatatta-aaatatat--ttCCCTTTAGGTATTCACGTTAACATTGAAGAATGAGGCTTACTTACATC---TTTTTATGT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1472042 75 - 2520184 -AATATGAAA-----------------ACTG-AAA-ATATAGTTCCCTTTAGCTATTCAGAAAAATGTTGAAGAATGAAG-----TTACATA----TTTTCTGT i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=280765.000000 s hg38.chr4_KI270789v1_alt 135314 47 + 205944 TTGACAGAAGACAGTTATT--AGTAAGTA-----------TAATTAT----------------------------------------TAAAGTATACTTA s panTro5.chr4 192922725 51 + 194502333 TTGACAGAAGACAGTTGTT--AGTAAGTA-----------TAATTATT------------AGA------------------------TAAAGTATACTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806380 51 + 195804263 TTGACAGAAGACAGTTGTT--AGTAAGTA-----------TAATTATT------------AGA------------------------TAAAGTATACTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843643 51 + 4876863 TTGACAGAAGACAGTTATT--AGTAAGTA-----------TAATTATT------------AGA------------------------TAAAGTATACTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734060 51 + 115148730 TTGACAGAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------AGA------------------------TAAAGTATACTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016176 46 + 190429646 TTGACACAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------CGA-----------------------------TATAGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958953 46 + 189454096 TTGACACAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------CGA-----------------------------TATAGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350672 46 - 25927173 TCGACACAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------CGA-----------------------------TATAGTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380396 46 + 4669795 TTGACACAAGACagttatt--ggtaagta-----------taattatt------------aga-----------------------------tatagtta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338089 51 + 135778131 TTGACACAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------AGA------------------------TAAAGTATAGTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792079 46 - 2847728 TTGACACAAGACAGTTATT--GGTAAGTA-----------TAATTATT------------AGA-----------------------------TATAGTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906483 51 + 2368649 TTGACACAAGACAGTTATT--GGTAAGTA-----------TACTTGTT------------AGA------------------------TGAAGTATAGTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638747 45 - 190850796 ATGAGAC----CAGT--TT--AGTAATTA-----------TCATTAAT------------AGA------------------------TAAACTATACTTA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1017965 45 - 2196201 ATGAGAC----CAGT--TT--AGTAATTA-----------TAATTAAT------------AGA------------------------TAAAGTATATTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412736 45 - 5030052 ATTAGAC----CAGT--TT--AGTAATTA-----------TAATTAAT------------AGA------------------------TAAAGTAAACTTA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86624689 63 - 129401213 ACAACTTCACATAATTATTAGAGAAATTA-----------TGTTTCCT--TTTCTATAAGGGA------------------------TAAAATATGCTTA i mm10.chr8 I 1 C 0 s canFam3.chr16 16974374 75 - 59632846 GTAAGGCAAGCTAGTTACA--AGTAGGTA-----------TAATTATT------------AGAGAAATTCTTCCTGACTGTAAGAGATCAAGTATACATG i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1472117 73 - 2520184 ATCAAACAAGGTAGTTATC--AGTAAATCATCAGAGAAATTAATTCTTCCTTCCTTTAAAGGA------------------------TAGAATATACTT- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17525102 74 - 93316391 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=932483.000000 s hg38.chr4_KI270789v1_alt 135361 83 + 205944 TTTTCCATGTTT-AAAATATGAAAAATATGCAATATAGGTTGGTACTAAGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT s panTro5.chr4 192922776 83 + 194502333 TTTTCCATGTTT-AAAATATGAAAAATATGCAATATAGGTTGGTACTAAGAG-GGGAAATCTGCTTCTGATCAAAATTTTACTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806431 83 + 195804263 TTTTCCATGTTT-AAAATATGAAAAATATGCAATATAGGTTGGTACTAAGAG-GGGAAATCTGCTTCTGATCAAAATTTTACTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843694 83 + 4876863 TTTTCCATGTTT-AAAATATGAAAAATATGCAATATAGGTTGGTACTAAGAG-AGGAAATCTGCTTCTGATCAAAATTATATTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734111 83 + 115148730 TTTTCCATGTTT-AAAATATGAAAAATATGCAATATAGGTTGGTACTAAGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016222 82 + 190429646 TTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187958999 82 + 189454096 TTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350718 82 - 25927173 TTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380442 82 + 4669795 tTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338140 82 + 135778131 TTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792125 82 - 2847728 TTTTCCATGTTT-AAAATATG-AAAATATGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906534 82 + 2368649 TTTTCCATATTT-AAAATATG-AAAATATACAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGATCAAAATTTTATTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638792 83 - 190850796 TTTTTCACGTTT-AACATTTGAAAAATATGCAACATAGGTTGGTACTAGGAG-GGGAAATCAGCTTCTGACCCaaattttatttt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1018010 78 - 2196201 TTTTCCA----T-AAAATATGAAAAATCCGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCT-ACCCAAATTTTATTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412781 84 - 5030052 TTTTCCGTGTTTAAAAAAATTAAAAATACGCAATATAGGTTGGTACTAGGAG-GGGAAATCTGCTTCTGACCCAAATTTTATTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17525176 83 - 93316391 TTTTCCATGTGT-AATATGTGAAAAATATATAATATAGATTGCTACTAAATA-GGGAAATATGCTTCTGATAAAAattttatttt i micMur3.chr14 I 74 I 139 s mm10.chr8 86624752 84 - 129401213 TTTTAAGTGTAA-AAGACATGAAACATATGTAGTATAGACAGTTATTAAGTGTGAAAAATCTACATCTGATCAAAACTTCATTTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16974449 79 - 59632846 TTTTCCATGGAT-GAAATATGAAAAGTTTATAGAACAAATTGCTATTAAATA-GGAAAATCTACTTGTGATCAAAATATTA---- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1472190 82 - 2520184 TCCCCCATGCTT-AAAATATGAGAAATGCACAGTATAGATTTTGATTAA-TG-GAGGAATCTCCTTCTGATCAAAATCTCATTTC i dasNov3.JH570353 C 0 C 0 e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=899698.000000 s hg38.chr4_KI270789v1_alt 135444 91 + 205944 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGCAAAGTTACTTTAAAAGAAAACAAAATCAAAG s panTro5.chr4 192922859 91 + 194502333 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGCAAAGTTACTTTaaaacaaaacaaaatcaaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806514 91 + 195804263 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGCAAAGTTACTTTaaaacaaaacaaaatcaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843777 91 + 4876863 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGCAAAGTTACTTTaaaacaaaacaaaatcaaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734194 91 + 115148730 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGCGAAGTTACTTTaaaacaaaacaaaatcaaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016304 91 + 190429646 AAATATCG--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959081 91 + 189454096 AAATATCG--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350800 91 - 25927173 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380524 91 + 4669795 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338222 91 + 135778131 AAATAGCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792207 91 - 2847728 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAAACAAAATCAAGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906616 91 + 2368649 AAATATCA--TTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTaaaacaaaacaaaatcaaag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638875 82 - 190850796 aaatatgatttttttatttCTTTTGTCCTAAGTTATGTA-CTTTTTGTTCTATTACTTGTTGTGAAGTTACTTTAAAACAAA-----------G i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1018088 81 - 2196201 AAATATCA-TTTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAA-----------G i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412865 81 - 5030052 AAATATGA-TTTTTTATTTCTTTTGTCCTAAGTTATATA-CTTTTTCTTCTATTACTTATTGTGAAGTTACTTTAAAACAAA-----------G i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86624836 71 - 129401213 ----AATA--TTTTTGTCCTCTTTATTCTAAGTTAACCATTTTTTTCTTCTAACTGTAATTATAAA-TTGCTGTGAAA---------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16974528 82 - 59632846 -----------ATTTATCTGTTTTGTTCTAAGTTACATA-CTTTTTCTTCTATTATTTATTTTGAATCTACTTTAAAACAGAACCAAATAAACC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1472272 78 - 2520184 ------AA--CTTTTATTTTATCTA-------TTACATC-CTATTTCTTCCACTATTTATTGTAAAGTTACTTTAAAACAGAACAAAATCAAAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17525259 139 - 93316391 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=1826521.000000 s hg38.chr4_KI270789v1_alt 135535 192 + 205944 AAAGCAATCAACCAAGATTTTAAAAATAATAATAGCAGAATCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCTTGCCTTCACAGCT---TTTTTTGTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCAA----AGGGCATGGATCTGTGATACCGTGG-GTCC--TGCCAAGCTGAAGGTTTTCCTTTGGCC s panTro5.chr4 192922950 192 + 194502333 aaagcaatcaacaaaGATTTTAAAAATAATAATAGCAGAATCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCTTGCCTTCACAGCT---TTTTTTGTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCAA----AGGGTATGGATCTATGATACCGTGG-GTCC--TGCCAAGCTGAAGGTTTTCCTTTGGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806605 192 + 195804263 aaagcaatcaacaaaGATTTTAAAAATAATAATAGCAGAATCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCTTGCCTTCACAGCT---TTTTTTGTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCAA----AGGGTATGGATCTATGATACCGTGG-GTCC--TGCCAAGCTGAAGGTTTTCCTTTGGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3843868 192 + 4876863 aaagcaaTCAACCAAGATTTTAAAAATAATAATAGCAGAATCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCTTGCCTTCACAGCT---TTTTTTGTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCAA----AGGGCATGGATCTGTGATACCGTTA-GTCC--TGCCAAGCTGAAGGTTTTCCTTTGGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734285 191 + 115148730 aaagcaaTCAACCAAGATTTTAAAAATAGTAAGAGCAGAATCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCTTGCCTTCACAGCT---TTTTTTGTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCAA----AGGGCATGGATCTGTGATACCATGG-GCCC--TGCCAAGCTGAAGG-TTTCCTTTGGCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016395 227 + 190429646 AAAGCAATCAACCAAGATTTAAAAACTAATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTGGAAACATTTTAGATATTTACGCCAA----AGGGAATGGATCTGTGATACCATGG-GTCC--TGCCAA-CTGAAGG-CTTCCTTTAGCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959172 227 + 189454096 AAAGCAATCAACCAAGATTTAAAAACTAATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTGGAAACATTTTAGATATTTACGCCAA----AGGGAATGGATCTGTGATACCATGG-GTCC--TGCCAA-CTGAAGG-CTTCCTTTAGCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24350891 227 - 25927173 AAAGCAATCAACCAAGATTTAAAAACTAATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTGGAAACATTTTAGATATTTACGCCAA----AGGGAATGGATCTGTGATACCATGG-GTCC--TGCCAA-CTGAAGG-GTTCCTTTAGCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380615 227 + 4669795 AAAGCAATCAACCAAGATTTAAAAACTAATAATGGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTGGAAACATTTTAGATATTTACGCCAA----AGGGAATGGATCTGTGATACCATGG-GTCC--TGCCAA-CTGAAGG-CTTCCTTTAGCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338313 222 + 135778131 AAAGAAATCAACCAAGATTTAAAAACTAATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTCGAAACATTTTAGATATTTACGCCAA----AGGGCATGGATCTGGGATACCATGG-GTCC--TGCCAA-CTGAAGG------TTTAGCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792298 227 - 2847728 AAAGCAATCAACCAAGATTTAAAAACTAATAATGGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCACTCCATCCTGCCTTCACAGAT---TTTTTGGTTTCCAAGGGTAGTGGAAACATTTTAGATATTTACGCCAA----AGGGAATGGATCTGTGATACCATGG-GTCC--TGCCAA-CTGAAGG-CTTCCTTTAGCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906707 187 + 2368649 aaagcaaTCAACCAAGATTTAAAAACTAATAATAGCAGAATCTCCTCAGTTCTTTCCTCTTCTCCAC----------------------------------------TCCTCCTGCCTTCACAGCT---TTTTTGGTTTCCAAGGGTAGTCGAAACATTTTAGATATTTCCACCAA----AGGGCATGGCTCTATGATACCACGG-GTCC--TGCCAA-CTGAAGC-TTTCCTTTAGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189638957 190 - 190850796 AAAGCAATCAACCAAGATTTTTCCAATAATAGTAGCAAAGTCTC-------------------------------------TCCTCAATTCTTTCCCCTTCTCCTCTCCATCCTGACTTCTCAGCT---CTTTT-GTTTCCAGAGGTAGTCGAAACATTTTAGATATTTATGCCCA----AGGGCATGGATCTGTGATACCATGG-GTCC--TGCCAAGCTGAAGG-TTTCCTTTGGCC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1018169 188 - 2196201 AAAGCAATCAACCAAGATTTTTCAGATAATAGTAGCAGAGCCTC-------------------------------------TCCTCAGCTCTTTCCTCTTCT--TCTCCATCCTGACTTCACAGCT---CCTTT-GTTTCCAAAGGGAGTCGAAACACTTTAGATATTTATGCCCC----AGGGCAGGGATCTGTGATACCATGG-GTCC--TGCCAAGCTGAAGC-TTTCCTTTGGCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3412946 190 - 5030052 AAAGCAATCAACCAAAATTTTTCAAATAATAGTAGCAGAGTCTC-------------------------------------TCCTCAATTCTTTCCTCTTCTCCACTCCATCCTGACTTCACAGCT---CTTTT-GTTTCCAAAGGTAGTCAAAACATTTTAGATATTTATGCCCA----AGGGCATGGATCTGTGATACCATGG-GGCC--TGCCAAGCTGAAGG-TTTCCTTTGGCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17525398 186 - 93316391 AAAGCAATCAACCAAAATTTTTAAAA----AATGGCAAAGTCTC-------------------------------------TCCTCAATCATTTTTTCTTCTCCACTTCATCTTGCTTTCACAGTT---CTTTT-GTCTCCAAAGGGAGGCAAAACACTTTAGATATTTATGACAA----AGGACACGGATCTGTGATACTGTTG-GTCA--TCGCAAGCTTAAGT-TTTCCTTTCTCC i micMur3.chr14 I 139 C 0 s mm10.chr8 86624907 168 - 129401213 ----CAATCAGTCAAGTT-----AGGAAATACCACCAGAGCCTA-------------------------------------CTCTCA-----CTCATTTTTTTTATGGCATGTTTTCTTTACAACT---CTTTT-GTGTCCAAAGGC------AACCCTTTA-CTATTTATGCCAA----GTGTCAATGGTCT---CTACAGTGT-ACCCTTTGATAAACTTAAAA-TTTTCTTTGGCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16974610 183 - 59632846 AAGGCAATCCACTAAAAT-TAAAAAAAAATAATGGTAAAGCCTC-------------------------------------TCCTTGATTCTTATT---------CTCCATCTTGCTTTCATAGTTTTGTTTTTTATCTCCAAAGGTAGGCAAAACACTCTGGATATTTATGCCCA----AGGAC-TGTGTCTGTGACACCATGG-ATCC--TGCCAAGTTTAAGT-TTTCCCTTGGGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1472350 188 - 2520184 AAGACGATTAACCAAAGG-----AAAAGACAAAGGTCTCTGCTC-------------------------------------CCCTCGGTCCTTTCTTCTTCCACCCTCCAGTCAGCCTTTGCAGCT---CCTCT-GTCTCCAGAGCTGGCCGAGACGGAGTG--CATTTATACCAATCAGAGGGCACGTGTCTGGGATTCTGAGGAGTCC--TGCCATGTTTAAGT-TTTCCTTTGGTC i dasNov3.JH570353 C 0 I 428 e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=537032.000000 s hg38.chr4_KI270789v1_alt 135727 46 + 205944 AAGATAAGTTACTGTGGAAGGAAAGTAACTCTTCCAATCCACGGTT s panTro5.chr4 192923142 46 + 194502333 AAGATAAGTTACTGTGGAAGGAAAGTAACTCTTCCAATCCACGGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806797 46 + 195804263 AAGATAAGTTACTGTGGAAGGAAAGTAACTCTTCCAATCCACGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844060 46 + 4876863 AAGATAAGTTACTGTGGAAGGAAAGTAACTCTTCCAATCCACGGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734476 46 + 115148730 AAGATAAGTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016622 46 + 190429646 AAGATAACTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959399 46 + 189454096 AAGATAACTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351118 46 - 25927173 AAGATAACTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380842 46 + 4669795 AAGATAACTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338535 46 + 135778131 AAGATAACTTACTATGGAAGGAAAGTAACTCTTCCAATCCATGGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792525 46 - 2847728 AAGATAACTTACTGTGGAAGGAAAGTAACTCTTCCAATCCATGGTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906894 46 + 2368649 AAGATAAGTTACTGTGGAAGGAAAGTGACTCTTCCAATCCATGGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189639147 44 - 190850796 AAGATAAGTTACTGCAGAAGGAAAATAA--CTTCCAATTCATGGTT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1018357 46 - 2196201 AAGATAAGTTACTGCGGAGGGAAAAGAACTCTTCCAATCCATGGTT i cebCap1.NW_016107886v1 C 0 I 349 s aotNan1.NW_018492112v1 3413136 46 - 5030052 ATGGTGAGTTACTGTGGAAGGAAAATAACTCTTCCAATCCATGGTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17525584 46 - 93316391 AAGATAAGCTACTGTTGAAGGAAAAGGACCCTTCTAATCCATAGTT i micMur3.chr14 C 0 C 0 s mm10.chr8 86625075 46 - 129401213 AAAGTGAAGCATTATATAAGAAAAAGACCTTTTCTGATTCAAGATT i mm10.chr8 C 0 C 0 s canFam3.chr16 16974793 46 - 59632846 AATATAAATCACTGTTGAAGGAAACAGTCTTTTCTAATCCATAGTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1472966 45 - 2520184 AAGATAAGTTTCTGTTGAAGGCAAAGGGCTCTTCAAATATACGGT- i dasNov3.JH570353 I 428 C 0 e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=179705.000000 s hg38.chr4_KI270789v1_alt 135773 19 + 205944 CTTAG------AAAATTATACTTTT s panTro5.chr4 192923188 19 + 194502333 CTTAG------AAAATTGTACTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806843 19 + 195804263 CTTAG------AAAATTGTACTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844106 19 + 4876863 CTTAG------AAAATTATACTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734522 19 + 115148730 CTTAG------AAAATTATACTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016668 25 + 190429646 CTTAAAAGTATAAAATTATACTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959445 25 + 189454096 CTTAAAAGTATAAAATTATACTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351164 25 - 25927173 CTTAAAAGTATAAAATTATACTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380888 25 + 4669795 CTTAAAAGTATAAAATTATACTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338581 25 + 135778131 CTTAAAAGTATAAAATTATACTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792571 25 - 2847728 CTTAAAAGTATAAAATTATACTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906940 25 + 2368649 CTTAAAAGTATAAAATTATGCTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189639191 19 - 190850796 CTTAG------AAAATTATACtttt i calJac3.chr3 C 0 I 1 s aotNan1.NW_018492112v1 3413182 19 - 5030052 CTTAG------AAAATTATACtttt i aotNan1.NW_018492112v1 C 0 I 326 s micMur3.chr14 17525630 19 - 93316391 CTTAG------AAAATTATACTTTT i micMur3.chr14 C 0 I 113 s mm10.chr8 86625121 20 - 129401213 TTTAAA-----AACATCCAACTTTC i mm10.chr8 C 0 I 17 s canFam3.chr16 16974839 19 - 59632846 CTTAA------AAACTTATTCTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473011 19 - 2520184 CTTAG------AAAATTAATCTGCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=60221.000000 s hg38.chr4_KI270789v1_alt 135792 9 + 205944 ATACTTTTT s panTro5.chr4 192923207 9 + 194502333 ATACTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806862 9 + 195804263 ATACTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844125 9 + 4876863 ATACTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734541 9 + 115148730 ATACTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016693 9 + 190429646 ATGCTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959470 9 + 189454096 ATGCTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351189 9 - 25927173 ATGCTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380913 9 + 4669795 ATGCTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338606 9 + 135778131 ATACTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792596 9 - 2847728 ATGCTTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906965 9 + 2368649 ATACTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189639211 9 - 190850796 tgacttttt i calJac3.chr3 I 1 I 286 s mm10.chr8 86625158 9 - 129401213 ctatttttt i mm10.chr8 I 17 I 4 s canFam3.chr16 16974858 7 - 59632846 -TTCTTTC- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473030 5 - 2520184 ----TCTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17525649 113 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=443169.000000 s hg38.chr4_KI270789v1_alt 135801 65 + 205944 AAATTTTAA---------------------------ATGAAATGCCCCACAGCTTTCAATGCATACCCAGTTCAGAGAATTTGAATATCATC s panTro5.chr4 192923216 65 + 194502333 AAATTTTAA---------------------------ATGAAATGCCCCACAGCTTTCAATGCATACCCAGTTCAGAGAATTTGAATATCATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806871 65 + 195804263 AAATTTTAA---------------------------ATGAAATGCCCCACAGCTTTCAATGCATACCCAGTTCAGAGAATTTGAATATCATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844134 65 + 4876863 AAATTTTAA---------------------------ATGAAATGCCCCACAGCTTTCAATGCATACCCAGTTCAGAGAATTTGAATATCATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734550 65 + 115148730 AAATTTTAA---------------------------ATGAAATATCCTACAGCTTTCAATGCATACCCAGTTCAGAGAACTTGAATATCATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016702 65 + 190429646 AAATTTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATCTCATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959479 65 + 189454096 AAATTTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATTTCATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351198 65 - 25927173 AAATTTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATCTCATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380922 65 + 4669795 AAATTTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATCTCATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338615 65 + 135778131 AAATTTTAA---------------------------ATGAAACGTCCCGCAGCTTTCAACGCACACCCAGTTCAGAGAACTTGAATCTCATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792605 65 - 2847728 AAATTTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATCTCATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 906974 65 + 2368649 AAATGTTAA---------------------------ATGAAATGTCCCACAGCTTTCAATGCACACCCAGTTCAGAGAACTTGAATCTCATC i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86625171 91 - 129401213 aaataaaaataGAATAAAGTACCTCCCTTTTCTCTCATGAAATACCATATGCATTTCAGCACATACCCACTTTAGAAAA-TTAAAGATCATC i mm10.chr8 I 4 I 541 s canFam3.chr16 16974865 55 - 59632846 ------------------------------------ATGCAAAGCTGT-TACCTTTCAATGAACACCCAATTCAGCAAACTTAAATATTATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473035 57 - 2520184 -----------------------------------CAAGAAATGCTCCATGTCTTTCAATACACATCCAGTTCAATGAACTTAAAAACCATC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17525649 113 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=225574.000000 s hg38.chr4_KI270789v1_alt 135866 40 + 205944 CAACATGCTT-CCACAGTGATC---CCAGTCTGAGAGGACTGTG s panTro5.chr4 192923281 40 + 194502333 CAACATGCTT-CCACAGTGATC---CCACTCTGAGAGGACTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806936 40 + 195804263 CAACATGCTT-CCACAGTGATC---CCACTCTGAGAGGACTGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844199 40 + 4876863 CAACATGCTT-CCACAGTGATC---CCAGTCTGAGAGGACTGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734615 31 + 115148730 CAACATACTT-CCACAGTGATC---CCAGTCTGA---------G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016767 40 + 190429646 CAACATGCTT-CCACAGTGATC---CCAGTCTCAGAGGACTATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959544 40 + 189454096 CAACATGCTT-CCACAGTGATC---CCAGTCTCAGAGGACTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351263 40 - 25927173 CAACATGCTT-CCACAGTGATC---CCAGTCTCAGAGGACTATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3380987 40 + 4669795 CAACATGCTT-CCACAGTGATC---CCAGTCTCAGAGGACTATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338680 40 + 135778131 CAACATGCTT-CCACAGTGATC---CCAGTCTGAGAGGACTATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792670 40 - 2847728 CAACATGCTT-CCACAGTGATC---CCAGTCTCAGAGGACTATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907039 40 + 2368649 CAGCATGCTT-CCACAGTGATC---CCCGTCTGAGAGGACTATG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16974920 34 - 59632846 AAATACCCTT-CCATAGTGAGG---TCAGTCTCAGGGG------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473092 44 - 2520184 AAATATCCCTGCCATAAATAACTGTCTCGTCTGAGAGTGCTACC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17525649 113 - 93316391 I e mm10.chr8 86625262 541 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=68806.000000 s hg38.chr4_KI270789v1_alt 135906 12 + 205944 TTATTATGTAAA s panTro5.chr4 192923321 12 + 194502333 TTATTATGTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806976 12 + 195804263 TTATTATGTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844239 12 + 4876863 TTATTATGTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734646 12 + 115148730 TTATTATGTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016807 12 + 190429646 CTATTATGGAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959584 12 + 189454096 CTATTATGGAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351303 12 - 25927173 CTATTATGGAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381027 12 + 4669795 CTATTATGGAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338720 12 + 135778131 TTATTATGGAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792710 12 - 2847728 CTGTTATGGAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907079 12 + 2368649 TTATTACGGAAA i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86625803 11 - 129401213 TTACTATAGAA- i mm10.chr8 I 541 C 0 s canFam3.chr16 16974954 12 - 59632846 TTATCTTATAGA i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1473136 11 - 2520184 TTACTATGGAA- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17525649 113 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=216984.000000 s hg38.chr4_KI270789v1_alt 135918 29 + 205944 TGCATAGCTTGCTTTCTAGGTAATAAATG s panTro5.chr4 192923333 29 + 194502333 TGCATAGCTTGCTTTCCAGGTAATAAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192806988 29 + 195804263 TGCATAGCTTGCTTTCTAGGTAATAAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844251 29 + 4876863 TGCATAGCTTGCTTTCTAGGTAATAAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734658 29 + 115148730 TGCATAGCTTGCTTTCTAGGTAATAAACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016819 29 + 190429646 TGCATAGCTTGCTTTCTAGGTAATAAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959596 29 + 189454096 TGCATAGCTTGCTTTCTAGGTAATAAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351315 29 - 25927173 TGCATAGCTTGCTTTCTAGGTAATAAATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381039 29 + 4669795 TGCATAGCTTGCTTTCTAGGTAATAAATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338732 29 + 135778131 TGCATAGCTTGCTTTCTAGGTAACAAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792722 29 - 2847728 TGCATAGGTTGCTTTCTAGGTAATAAATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907091 29 + 2368649 TGCATAGCTTGCTTTCTAGGTAATAAATG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17525762 28 - 93316391 TGCATAGCTTGCTTTCTAGATAGTAATT- i micMur3.chr14 I 113 C 0 s mm10.chr8 86625814 29 - 129401213 TATGTAACTTCTCGTGTGGAAATTTAACA i mm10.chr8 C 0 C 0 s canFam3.chr16 16974969 22 - 59632846 TGTATAGATTGTATTTTAGATA------- i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1473147 29 - 2520184 TGCATTGTGTGGTTTGTAGATAACAAACA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11251442 500 - 11315646 I a score=2135239.000000 s hg38.chr4_KI270789v1_alt 135947 264 + 205944 ATAAAACTCTTCATACAGGAGAAT---TTGGTCTTCGGTGTATTTCTAT-ATGTATTGAAGGTTTGCTGTGAAATCACTCTGGAATCTCTCAG-CTGGTCTGCTCCACAGTATCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCATGCTCACTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTGCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGGAGAGGATGTGAGTGTTG-AATTGTATT-------------TCAG s panTro5.chr4 192923362 264 + 194502333 ATAAAACTCTTCATACAGGAGAAT---TTGGTCTTCGGTGTATTTCTAT-ATGTATTGAAGGTTTGCTGTGAAATCACTCTGGAATCTCTCAG-CTGGTCTGCTCCACAGTATCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCATGCTCACTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTGCTTTTGCATGCCAAGAATTT-TATCCTTATTTTTGGAGACAGGAGAGGATGTGAGTGTTG-AATTGTATT-------------TCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807017 264 + 195804263 ATAAAACTCTTCATACAGGAGAAT---TTGGTCTTTGGTGTATTTCTAT-ATGTATTGAAGGTTTGCTGTGAAATCACTCTGGAATCTCTCAG-CTGGTCTGCTCCACAGTATCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCATGCTCACTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTGCTTTTGCATGCCAAGAATTT-TATCCTTATTTTTGGAGACAGGAGAGGATGTGAGTGTTG-AATTGTATT-------------TCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844280 264 + 4876863 ATAAAACTCTTCATACAGGAGAAT---TTGGTCTTCGGTGTATTTCTAT-ATGTATTGAAGGTTTGCTGTGAAATCACTCTGGAATCTCTCAG-CTGGTCTGCTCCACAGTATCCTACTAGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCATGCTCACTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTGCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGGAGAGGATGTGAGTGTTG-AATTGTATT-------------TCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734687 264 + 115148730 ATAAAACTCTTCATACAGGAGAAT---TTGGTCATCGGTGTGTTTCTAG-ATGTATTGAAGGTTTGCTGTGAAATCACTCTGGAATCTCCCAG-CTGGTCTGCTCCACAGTATCCTGCTGGTCTTGGGCTTTGTCTATGAACTTTCCAGAACTCATGCTCACTACAGACTTTCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTG-TATCCTTATTTTTGGAGACAGGAGAGGATGTGAGTGTTG-AATTGTATT-------------TCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189016848 277 + 190429646 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-ATGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAATCTCTCAG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTTGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959625 277 + 189454096 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-ATGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAATCTCTCAG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTTGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351344 277 - 25927173 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-ATGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAATCTCTCAG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTTGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381068 277 + 4669795 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-ATGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAATCTCTCAG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTTGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134338761 277 + 135778131 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-GTGTATTGAAGGTCTGCTGTGAAATCTCTCGGGAATCTCTCAG-CTGGTTTGTACCACCGTACCCTACTGGTCTTAGACTTTGTATATTAACTTTCCAGAACTCAGGCTCGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTATTTTTCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AACTGTATTTCAGAAAAATCAGTCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2792751 277 - 2847728 ATAAAACTCTTCATAGAGGAGAAT---TTGGTCATCGGTGTGTTTCTCT-ATGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAATCTCTCCG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTTGCTACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTATTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907120 277 + 2368649 ATCAAACTCTTCATAGAGGAGAAT---TTGGTCATGGGTGTGTTTCTCT-GTGTATTGAAGGTCTGCTGTGAAATCTCTCTGGAGTCTCTCAG-CTGGTCTGTACCACGGTACCCTACTGGTCTTGGGCTTTGTATATTAACTTTCCAGAACTCAGGCTCACCACAGACTTGCTTTAGGGCCTCTAAATATTTGTTTCTTTTGCATGCCAAGAGTTT-TATCCTTAGTTTTGGAGACAGAAGAGGATGTGAGTGTTG-AATTGTATTTCAGAAAAATCAGTCAG i colAng1.NW_012116221v1 C 0 C 0 s micMur3.chr14 17525790 261 - 93316391 -TAGAACTCTTCATACAGATGAAT---TTGGTCATCAGTGCATATCTTA-ATGTATTGAATGATTCCC-TGAAATTGCTCTGGAATCTTTCAG-TTGGTCTGTACTGTGGTTTCCTACTGGC--TGCAATTTGTATATTAACTCTCCAGAGCTCATGCTCACTACAGACATGCTTTAGAGCCTCTAAATATTTGTTCCTTTTGCAGACCGTGAATTTATATCCATATTTCTGGAGACAGGAGATGATGTGAGTGTCT-AATTGTATT-------------TCAG i micMur3.chr14 C 0 I 712 s otoGar3.GL873580 11251942 262 - 11315646 ATAAAACTCTTTTTACATTTGAAT---TTGTTGATTAGTGTGTATCTTA-ATGTACTGACTCTTTCCTACGAGATCACCCTGAAATCTTGCAG-TTGGTCTACATCATCA-TCCCTGCTGGCCTTACACTGTTTGTACTAACTCTCCAGAGCTCATGCTCACTACATACATGCTTTAGGCACTCCAAATATTTGTTCCTTCTGCATACCATGAGTTTATAGCCACATTTTTGGAGACAGGAGATGATGTGAGTGCTT-AATTGCATT-------------TC-- i otoGar3.GL873580 I 500 C 0 s mm10.chr8 86625843 269 - 129401213 ATGAAACTCTGC---CAGGCTAATTTCTTGGTC-CCAGAGCCTGTTCAG-GGACATGGACTTTTTCTTGCAAATTCACTCTATATTGTA-AGG-TTAGGTTATACCACA-TATCTTCCCAGCCTTCAACTTTGTAACCTAACTTTTGGGAGCTCTTGCCCACCATAAAGATGCTTTAAGGCCTTGTAGT-TTTGCC-CTTTTTCATATCACAAATTTCTGTTCAGTTTTGTTGAGATAGAAGAAAACATAGATGT-----TTGCCTTTTATGAAGATCAGTTAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16974991 271 - 59632846 ATAAAATTATTCTTACAGGTGATT---TTGATAATCAGTGTGCATCTAG-AAGTACTAAATGCTTCCCATTAAATGACT--GTAATCTTTTAGTTTGGTTTGTACTACAATAGGTTATTGGCCTTGCATTTTGTATGTTCACTTTGCAGAGCTCATGCTCACTACACACACAC-TCAGAACCTCTAAATATTTGTTTCTTGTGTATACCATGAATTTCTATACTAATTTTTGGAGACAGGAGATGATGTCAATGTTGTAATTGTA-----AAAAAATCA-ACAG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1473176 249 - 2520184 ATAAAACCCTCCATGCATGTAAAT---TTGAGCATCATTATGTAGAACTGATGCATCGAGAGTTACCCATTAAATTACTCCATAATCCATCAG-TGTGTCTGCAACGCGCTGTCACGTTGGCCTTGTACTTCGTCTGTGAACTTTCCAGAACTCGTGCTT-CCATAAACACGCTCCAGGGCCCCTAAATTTCTGTGCCTTTTGCATACCATG-------------------GAGGACATGAGGAGACTTTGATATTT-AATTGTATTTTGAAAA---------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=1040602.000000 s hg38.chr4_KI270789v1_alt 136211 150 + 205944 GTTACCCTTGGGACATCA-AAATGACCAAGGC-------------------AGTGTCTGCTAAGTATTTGCTGAGACTCTGCTATGATTCTTTCAAGTCTAAAGACAGTTATCTGAATGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT s panTro5.chr4 192923626 150 + 194502333 GTTACCCTTGGGACATCA-AAATGACCAAGGC-------------------AGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCTTTCAAGTCTCAAGACAGTTATCTGAATGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807281 150 + 195804263 GTTACCCTTGGGACATCA-AAATGACCAAGGC-------------------AGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCTTTCAAGTCTCAAGACAGTTATCTGAATGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844544 150 + 4876863 GTTACCCTTGGGTCATCA-AAATGACCAAGGC-------------------AGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCTTTCAAGTCTCAAGACAGTTATCTGAACGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112734951 150 + 115148730 GTTACCCTTGGGACATCA-AAATGACCAAGGC-------------------AGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCTTTCAAGTCTCAAGACAGTTATCTGAATGATATCCCCATGACAATGGACTCCTGCACATTCACAGTCCTGGAAGGAACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017125 163 + 190429646 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTATCTGCTAAGTATTTCCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAATGATGTCCCCATGGCAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187959902 163 + 189454096 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGGAGATAC------AGTGAGTATCTGCTAAGTATGTGCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAATGATGTCCCCATGGCAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351621 163 - 25927173 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTATCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAATGATGTCCCCATGGCAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381345 163 + 4669795 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAACAATGTCCCCATGGCAGTGGACTCCTGCACATTCATAGTCCTGGAAGGAGCCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134339038 163 + 135778131 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTTGTGTAAGTCTCAGGATAGTTATCTGAACGATATCGCCATGGCAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793028 163 - 2847728 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAACGATGTCCCCATGGCAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907397 163 + 2368649 GTTACCCTTGGGACATCA-AAATGATCAAGGCAGTAGATAC------AGTGAGTGTCTGCTAAGTATTTGCTGAGACTCTGGTATGATTCGTGTAAGTCTCAGGATAGTTATCTGAACGATATCGCCATGGCAGTGGACTCCTGCACATTCACAGGCCTGGAAGGAGCTT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11252204 165 - 11315646 ---ATCCTTGGGAAATCA-GAGTGACCAAGGCAGTGGGTGCATGAGTAGCTGGTGTTTGCTAAGTACTTACTGAAACTCCAGCATCGCTGTGGCAAGTCTGCAGACAGTTGTCTG-ACAGCATCTCAGTGACAGCAGGTGCCTGCTCATTTCTGGTGCTGGGAAGATCCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86626112 142 - 129401213 GTCATCCAGGCGATGTCA-CAGTAGTCAGGAT-GTAACTGT-------GCTACCATCTAC--ATTATTTCCTGAGTCTAAGGCACGATGATTGTAGGTTTAGAGAC---------------TTCCCTGTGATCAC--ATTCCCACACACTGCCAATTCGTGGGGAAGCTT i mm10.chr8 C 0 I 114 s canFam3.chr16 16975263 163 - 59632846 GTCAACCTTAGGACGTCA-TGATGACCAATACAGCAAATAC------ATTTAGTGCTTACTAAATATTTTCTGAGACCTTGGTATCATTCTTACAAGTATTCAAATGATTTTCTGGACCACATCCCAGTGACACTGGGTTCCCTTACATTCACAATTCCGGAAAGAGCCT i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1473425 140 - 2520184 TATATCCTTAGGAGGTCATCAGTGACTGCTGCACTTGATAC------ATTCAGTGTATATTAAACATCTCCTCAAGCTTGTATATCATTATTACAAGAATTAGAACAGTTTTCTGGACTACATCCTAGTGACAGCGGGGAT-------------GTCCT----------- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=320826.000000 s hg38.chr4_KI270789v1_alt 136361 46 + 205944 GTCCACATTGGCATTCTGGAAGTCCATAA---AAGACAAACGCATATGC s panTro5.chr4 192923776 46 + 194502333 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACACATATGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807431 46 + 195804263 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACACATATGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844694 46 + 4876863 GTCCACACTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735101 46 + 115148730 GTCCACATTGGCATTCCAGAAGTCCATAA---AAGACAAATGCATCTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017288 46 + 190429646 GTCCACATTGGCATTCTGGAAGTCCATAA---AAGACAAACGCATATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187960065 46 + 189454096 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351784 46 - 25927173 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381508 46 + 4669795 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134339201 46 + 135778131 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793191 46 - 2847728 GTCCACATTGGCATTCCGGAAGTCCATAA---AAGACAAACGCATATGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907560 46 + 2368649 GTCCACACTGGCATTCCAGAAGTCCATAA---AAGACAAATGCATATGC i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11252369 46 - 11315646 CTTCACTTTGCCATTCCAGAAATCCCTAA---AGGACAAACACGTATGC i otoGar3.GL873580 C 0 M 1233 s canFam3.chr16 16975426 33 - 59632846 CTTCATATTTCCATTCTAGAAATCCA-AA---AATCC------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473565 45 - 2520184 GTCA----TGGCCTTCCAGAAGTCCTCAAAGGAAGATAATCACATTTCT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M a score=498331.000000 s hg38.chr4_KI270789v1_alt 136407 84 + 205944 AGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTC-TGTTATGTGGTGCCGGCATGCATGGAAGAGTAAG s panTro5.chr4 192923822 84 + 194502333 AGTCCCCAAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTC-TGTTATGTGGTGCCGGCATGCATGGAAGAGTAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807477 84 + 195804263 AGTCCCCAAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTC-TGTTATGTGGTGCCGGCATGCATGGAAGAGTAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844740 84 + 4876863 AGTCCCCGACAAAGCATCGTTGTAAACAAATCTGCACTAGATGGAAACTC-TGTTATGTGGTGCCGGCACACATGGAAGAGTAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735147 84 + 115148730 AGTCCCCAAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTC-TGTTGTGTGGTGCCAGCATGCATGGAAGAGTAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017334 85 + 190429646 AGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAATTCTTGTTATGCGGTGCTGGCATGCATGGAAGCGTAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187960111 85 + 189454096 AGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAATTCTTGTTATGCAGTGCTGGCATGCATGGAAGCATAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351830 82 - 25927173 AGT--CCGAGAAAGCATTGTTTTAAACAAATCTGCACTAGATGGAAATTCTTGTTATGCGGTGCTGGCATGCAT-GAAGCGTAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381554 85 + 4669795 AGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAATTCTTGTTATGCGGTGCTGGCATGCATGGAAGCGTAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134339247 85 + 135778131 AGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTCTTGTTATGCAGTGCTGGCATGCATGGAAGAGTAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793237 84 - 2847728 AGT-CCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAATTCTTGTTATGCGGTGCTGGCATGCATGGAAGCGTAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907606 85 + 2368649 AGTCCCCGAGAAAGCATTGTTATAAACAAATCTGCACTAGATGGAAACTCTTGTTATGCGGTGCTGGCATGCATGGAAGAGTAAG i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16975459 84 - 59632846 TGCCACAGAGTGAACATTGGCATAAAATAATCTGTACCACATTGCTACTT-TTTTATGCAGCACCAACACCCGTGGAAGAATAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473610 73 - 2520184 TGCCACTGGGAAAACATTGC----------TTAGCACGACCTGTTCACCT-TCATATGTAGCACCAGC-TGCatggaagaatgag i dasNov3.JH570353 C 0 I 220 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11252415 1233 - 11315646 M a score=123529.000000 s hg38.chr4_KI270789v1_alt 136491 25 + 205944 ------TCCAGAACTACACCTGGAAGTTCTT s panTro5.chr4 192923906 25 + 194502333 ------TCCAGAACTACACCTGGAAGTTCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807561 25 + 195804263 ------TCCAGAACTACACCTGGAAGTTCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844824 18 + 4876863 ------TCCAGAACTACACCTGGA------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735231 25 + 115148730 ------GCTGGAACTACACCTGGAAGTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017419 25 + 190429646 ------TACAGAACTACATCTGGAAGTTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187960196 25 + 189454096 ------TCCAGAACTACATCTGGAAGTTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351912 24 - 25927173 ------TCCAGAACTACATCTGGAAG-TCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381639 25 + 4669795 ------TCCAGAACTACATCTAGAAGTTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134339332 25 + 135778131 ------TCCAGAACTACATCTGGAAGTTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793321 25 - 2847728 ------TCCAGAACTACATCTGGAAGTTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 907691 25 + 2368649 ------TCCAGAACTGTATCTGGAAGTTCTT i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16975543 31 - 59632846 AAAAATACCTGAGCTAGCTTTGTATGTTATT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11252415 1233 - 11315646 M a score=89177.000000 s hg38.chr4_KI270789v1_alt 136516 60 + 205944 TTTACTAAAAGAACA-CACAGT-TCTTttttactttattatatt-gtattt--------------tattttattttg s panTro5.chr4 192923931 60 + 194502333 TTTACTAAAAGAACA-CACAGT-TCTTTTTTACTTTATTATATT-GTATTG--------------TATtttattttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807586 60 + 195804263 TTTACTAAAAGAACA-CACAGT-TCTTTTTTACTTTATTATATT-GTATTG--------------TATtttattttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844842 37 + 4876863 -------------------AGT-TCTTTTTTATTTTATTATATT-GTATTG-------------------TAttttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735256 68 + 115148730 T------GAGTATCC-CACAGT-TCTTttttattatatcatatt-atattatattatattaattttattttatttta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017444 51 + 190429646 TT---------AGCATCACAAT-TCCtttttattttatt-tatt-tcattt--------------tattttacttta i rheMac8.chr5 C 0 I 40 s macFas5.chr5 187960221 36 + 189454096 TT---------AGCATCACAAT-TCCTTTTTATTTTAtt-tatt-tca----------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24351936 38 - 25927173 TT---------AGCATCACAATATCCTTTTTATTTTATT-TATTGTCA----------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381664 51 + 4669795 TT---------AGCATCAAAAT-TCCtttttattttatt-tatt-tcattt--------------tattttacttta i cerAty1.NW_012001672v1 C 0 I 40 s chlSab2.chr7 134339357 41 + 135778131 TT---------AGCATCACAAT-TCCTTTTTATTTTATT-TATT-TCAttt--------------ta---------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793346 51 - 2847728 TT---------AGCATCACAAT-TCCTTTTTATTTTAtt-tatt-tcattt--------------tattttacttta i manLeu1.NW_012102221v1 C 0 I 40 s colAng1.NW_012116221v1 907716 41 + 2368649 TT---------AGCATCACAAT-TCCTTTTTATTTTATT-TATT-TCATGT--------------TA---------- i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11252415 1233 - 11315646 M a score=49907.000000 s hg38.chr4_KI270789v1_alt 136576 20 + 205944 ttttattatactttaagttc s panTro5.chr4 192923991 20 + 194502333 ttttattatactttaagttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807646 20 + 195804263 ttttattatactttaagttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844879 20 + 4876863 ttttattatactttaagttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735324 20 + 115148730 ttttattacactttaagttc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187960257 20 + 189454096 ttttattttactttaatttc i macFas5.chr5 C 0 I 35 s macNem1.NW_012013133v1 24351974 19 - 25927173 tttatatttactttaa-ttc i macNem1.NW_012013133v1 C 0 I 34 s chlSab2.chr7 134339398 20 + 135778131 ttttattatactttaatttc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 907757 20 + 2368649 ttttattatactttaatttc i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e manLeu1.NW_012102221v1 2793397 40 - 2847728 I e cerAty1.NW_012001672v1 3381715 40 + 4669795 I e rheMac8.chr5 189017495 40 + 190429646 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=1171380.000000 s hg38.chr4_KI270789v1_alt 136596 225 + 205944 tagg-gtacatgtgcac-acatgcaggtttgttacatatgtatacgtgtgccatgttggtgtgctgcacccatcaactcatcatttaca-ttacgtatatctcctaatgctatccctcccc-cctccccccatcccacaacaggccccggtgtgtgatgttccccgccctgtgtccaagtgttctcattgttcaattcccaccaatgattgagaacatgcggtatttgg s panTro5.chr4 192924011 226 + 194502333 tagg-gtacatgtgcacaacatgcaggtttgttacatatgtatacgtgtgccatgttggtgtgctgcacccatcaactcatcatttaca-ttacgtgtatctcctaatgctatccctcccc-cctccccccaccccacaacaggcctcggtgtgtgatgttccccgccctgtgtccaggtgttctcattgttcaattcccaccaatgattgagaacatgcagtgtttgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807666 226 + 195804263 tagg-gtacatgtgcacaacatgcaggtttgttacatatgtatacgtgtgccatgttggtgtgctgcacccatcaactcatcatttaca-ttacgtgtatctcctaatgctatccctcccc-cctccccccaccccacaacaggcctcggtgtgtgatgttccccgccctgtgtccaggtgttctcattgttcaattcccaccaatgattgagaacatgcagtgtttgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3844899 218 + 4876863 tagg-gtacatgtgcacaacatgcaggtttgttacatatgtatacgtgtgccatgttggtgtgctgcacccatgaactcatcatttata-ttaggtatatctcctaatgctatccctcccc-actacccccaccccacaacaggccccagtgtgtgatgttccctgccctgtgtccaagtgttctcattgttcaattcc--------attgagaacatgcggtgtttgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735344 226 + 115148730 aagg-gtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtgtgctgcacccatcaactcatcatttaca-ttaggtatatctcctaatgctatccatccct-cagccccccaccccatgacaggcccccatgtgtgatgttccccgccctgtgtccaagtgttctcattgttcaattcccaccaatgattgagaacgtgcagtgtttgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017535 227 + 190429646 taggtgtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttaca-ttaggtatttctcctaatgctctccctccct-cagctccccaccccatgacaggcccccacgtgtgatgttccctgccctgtgtccaagtgttctcattgttcaattcccacctattagtgagaacatgtggtgtttgg i rheMac8.chr5 I 40 C 0 s macFas5.chr5 187960312 227 + 189454096 taggtgtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttaca-ttaggtatttctcctaatgctctccctccct-cagctccccaccccatgacaggcccccacgtgtgatgttccctgccctgtgtccaagtgttctcattgttcaattcccacctattagtgagaacatgtggtgtttgg i macFas5.chr5 I 35 C 0 s macNem1.NW_012013133v1 24352027 223 - 25927173 ta-gtgtaca-gtgcagaacatgcaggtttgttacataggtatacatgtgccatgctggtttgctgca-ccatcaaccgttcatttacatttaggtatttctcctaatgctcctcctccctccagctcccca-cccatgacag--ccccacgtgtgatgttccctgccctgtgtccaagtgttctcattgttcaattcccacctattagtgagaacatgtggtgtttgg i macNem1.NW_012013133v1 I 34 C 0 s cerAty1.NW_012001672v1 3381755 227 + 4669795 taggtgtacatgtgcacaacatgcaggtttattacataggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttaca-ttaggtatttctcctaatgctatccctccct-cagctccccaccccatgacaggcccccacgtgtgatgttccctgccctgtgtccaagtgttctcattgttccattcccacctattagtgagaacatgtggtgtttgg i cerAty1.NW_012001672v1 I 40 C 0 s chlSab2.chr7 134339418 226 + 135778131 tagg-gtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtttgctgcacccatcaactcgtcatttaca-ttaggtatttctcctaatgctatccctccct-cagctccccaccccatgacaggcccccatgtgtgatgttccctgccctgtgtccaagtgttctcattgtttaattcccacctatgagtgagaacatgtggtgtttgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793437 227 - 2847728 taggtgtacatgtgcacaacatgcaggtttgttacacaggtatacatgtgccatgttggtttgctgcacccatcaactcgtcgtttaca-ttaggtatttctcctaatgctatccctccct-cagcttcccaccccatgacaggcccccacgtgtgatgttccctgccctgtgtccaagtgttctcattgttcaattcccacctattagtgagaacatgtggtgtttgg i manLeu1.NW_012102221v1 I 40 C 0 s colAng1.NW_012116221v1 907777 226 + 2368649 -aagggtacatgtgcacaacatgcaggtttgttacataggtatacatgtgccatgttggtttgctgcacccatcaactcatcatttaca-ttaggtatttctcctaatgttatccctcctt-cagctccccaccccatgacaggcccccatgtgtgatgttccttgccctgtgtccaagagttctcattgttcaattcccacctattagtgagaacatgtggtgtttgg i colAng1.NW_012116221v1 C 0 I 943 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e otoGar3.GL873580 11252415 1233 - 11315646 M a score=3997821.000000 s hg38.chr4_KI270789v1_alt 136821 845 + 205944 ttttctgtccttgtgatagtttgctcagaatg-atggcttccagcttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatctgggtttgttccaagtctttgctattgtgaatagtgctagaataaaatacatgtgcatgtgtctttatagtagcgtgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaattgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgttaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagcgtctgttcatatcctttgcccactttttaatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctggatattagccctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagccctttagattaattcgatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtctttgcccatgcctgtgtcctcaatggtattgcctaggttt s panTro5.chr4 192924237 845 + 194502333 ttttctgtccttgtgatagtttgctcagaatg-atggcttccagcttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttgatccagtctatcattgatggacatctgggttcgttccaagtctttgctattgtgaatagtgctagaataaaatacatgtgcatgtgtctttatagtagcgtgatttataatcctttgggtatatacccagtaatgggatcgctgggtcaaatggtatttctagttctagatccttgaggaattgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttctctacatcctctccagcacctgttgtttcctgactttttaatgatagccattctaactggtgtgagatggtatctcattgcggttttgatttgcatttctctgatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttaatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctgaatattagccctttgtcagatgggtagattgcaaaacttttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagccctttagattaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagtctttgcccatgcctgtgtcctcaatggtattgcctaggttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192807892 845 + 195804263 ttttctgtccttgtgatagtttgctcagaatg-atggcttccagcttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttgatccagtctatcattgatggacatctgggttcgttccaagtctttgctattgtgaatagtgctagaataaaatacatgtgcatgtgtctttatagtagcgtgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaattgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttctctacatcctctccagcacctgttgtttcctgactttttaatgatagccattctaactggtgtgagatggtatctcattgcggttttgatttgcatttctctgatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttaatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctgaatattagccctttgtcagatgggtagattgcaaaacttttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagccctttagattaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagtctttgcccatgcctgtgtcctcaatggtattgcctaggttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3845117 846 + 4876863 ttttctgtccttgtgatagtttgctcagaatgtatggcttccagcttcatccatgtccctgcaaaggacatgaactcatcattttttatggctgcctagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatctgggtttgttccaagtctttgctattgtgaatagtgctagaataaaatacatgtgcatgtgtctttatagtagcgtgatttataatcctttgggtatatacccagtaatgggatcgctgggtcaaatggtatttctagttctagatccttgaggaattgccacactgtcttccacaatggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttctctacatcctctccagcacctgctgtttcctgactttttaatgatagccattctaactggtgtgagatggtatctcattgcggttttgatttgcatttctctgatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttaatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctggatattagctctttgtcagatgggtagattgcaaaacttttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagccctttagattaattagatcccattggtctattttggcttttgttgccattgtttttggtgttttagtctttgcccatgcctgtgtcctcaatggtattgcctaggttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112735570 845 + 115148730 ttttttgtccttgcgatagtttgctgagaatg-atgctttccagcttcatccatgtccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctgtcattgatggacatttgggttcattccaagtctttgctattgtgaatagtgccagaataaaatatgtgtgcatgtgtctttatagtagcgtgatttataatcctttgggtatatacccagtaatgggatcgctgggtcaaatggtatttctagttctagatccctgaggaatcgccacactgtcttccacaatggttgaactagtttacagtcccacaaacagtgtagaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttaagttctttgtagattctggatattagtcctttgtcagatgggtagattgcaaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagccctttagattaattagatcccatttttctattttggcttttgttaccattgcttttggtgttttagtctttgcccatgcctatgtcctgaatggtattgcctaggttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189017762 839 + 190429646 -tttctgtccttgcgatagtttgctcagaatg-atgttttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgctacattttcttaatccagtctatctttgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagaatacatttgcatgtgtctttatagtagcatgatttataatcctttggatatatacccagtaattggatcgctgagtcaaatggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttttccacatcctctccagcatctgttgtttcctgactttttaatgattgtcattctaactggcgtgagatggtatctcattgtggttttgatttgcgtttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttcttttgagaattgtctgttcatatcctttgcccactttttgatggggt--tttgtttttttcttgtaaatttgtttaagttctttgtcaattctggatattactcctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaatt-gatcctgtttgtctattttggcttttgttgccattg-ttttggtgtttcagtctttgcccatgcctgtgtcctgaatggtattgtctaggttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187960539 840 + 189454096 -tttctgtccttgcgatagtttgctcagaatg-atgttttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgctacattttcttaatccagtctatctttgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagaatacatttgcatgtgtctttatagtagcatgatttataatcctttggatatatacccagtaattggatcgctgagtcaaatggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttttccacatcctctccagcatctgttgtttcctgactttttaatgattgtcattctaactggcgtgagatggtatctcattgtggttttgatttgcgtttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttcttttgagaattgtctgttcatatcctttgcccactttttgatggagt--tttgtttttttcttgtaaatttgtttaagttctttgtcgattctggatattactcctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaatt-gatcctgtttgtctattttggcttttgttgccattgcttttggtgtttcagtctttgcccatgcctgtgtcctggatggtattgtctaggttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24352250 840 - 25927173 -tttctgtccttgcgatagtttgctcagaatg-atgttttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgctacattttcttaatccagtctatctctgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagaatacatttgcatgtgtctttatagtagcatgatttataatcctttggatatatacccagtaattggatcgctgagtcaaatggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtgtaaaagcgttcctatttttccacatcctctccagcatctgttgtttcctgactttttaatgattgtcattctaactggcgtgagatggtatctcattgtggttttgatttgcgtttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttctttagagaattgtctgttcatatcctttgcccactttttgatggggt--tttgtttttttcttgtaaatttgtttaagttctttgtcgattctggatattactcctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaatt-gatcctgtttgtctattttggcttttgttgccattgcttttggtgtttcagtctttgcccatgcctgtgtcctgaatggtattgtctaggttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3381982 840 + 4669795 -tttctgtccttgcgatagtttgctcagaatg-atggtttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgctacattttcttaatccagtctatctttgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagaatatgtttgcatgtgtctttatagtagcatgatttataatcctttggatatatacccagtaattggatcgctgagtcaaatggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtataaaagcgttcctatttttccacatcctctccagcatctgttgtttcctgactttttaatgattgtcattccaactggcgtgagatggtatctcattgtggttttgatttgcatttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttcttttgagaattgcctgttcatatcctttgcccactttttgatggggt--tttgtttttttcttgtaaatttgtttaagttctttgtcgattctggatattactcctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaatt-gatcctgtttgtctattttggcttttgttgccattgcttttggtgtttcagtctttgcccatgcctatgtcctgaatggtattgtctaggttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134339644 842 + 135778131 -tttctgtccttgcgatagtttgctcagaatg-atggtttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtatttcatggtgtatatgtgctacattttcttaatccagtctatctttgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagtatacgtttgcatgtgtctttatagtagcatgatttataatcctttggatatatacccagtaatgggatcgctgggtcaagtggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtgtaaaagcattcctatttttccacatcctttccagcatctgttgtttcctgactttttaatgattgtcattctaactggcgtgagatggtatctcattgtggttttgatttgcgtttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttcttttgagaattgtctgttcatatcctttgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttaagttctttgtcgattctggatattactcctttgtcagataggtagattgcaaaaattttctcccattccataggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaact-gaccctgtttgtctattttggcttttgttgccattgcttttggtgtttcagtctttgcccatgcctatgtcctgaatggtattgtctaggttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2793664 840 - 2847728 -tttctgtccttgcgatagtttgctcagaatg-atggtttccagcttcatccatttccctgcaaaggacatgaactcatccttttttatggctgcatagtattccatggtgtatatgtgctacattttcttaatccagtctatctttgatggacatttgggttggttccaaatctttgctattgtgaatagtgccagaatagaatacgtttgcatgtgtctttatagtagcatgatttataaccctttggatatatacccagtaattggatcgctgagtcaaatggtatttctggttgtagatccttgaagaatcgccacactgtcttctacagtggttgaactaatttacactcccactaacagtgtaaaagcattcctatttttccacatcctctccagcatctgttgtttcctgactttttaatgattgtcattctaactggtgtgagatggtatctcattgtggttttgatttgcgtttctctaatgaccagtgatgatgagcattttttcatgtgtctgttggctgcataaat-tcttcttttgagaattgtctgttcatatcctttgcccactttttgatggggt--tttgtttttttcttgtaaatttgtttaagttctttgtcgattctggatattactcctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctattcactctgatggtagtttcttttgctgtgcagaagccatttagtttaatt-gatcctgtttgtctattttggcttttgttgccattgcttttggtgtttcagtctttgcccatgcctgtgtcctgaatggtattgtctaggttt i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=1410.000000 s hg38.chr4_KI270789v1_alt 137666 15 + 205944 tcttctagggatttt s manLeu1.NW_012102221v1 2794504 15 - 2847728 tcttctagggatttt i manLeu1.NW_012102221v1 C 0 I 1992 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 908003 943 + 2368649 I e chlSab2.chr7 134340486 0 + 135778131 C e cerAty1.NW_012001672v1 3382822 0 + 4669795 C e macNem1.NW_012013133v1 24353090 0 - 25927173 C e macFas5.chr5 187961379 0 + 189454096 C e rheMac8.chr5 189018601 0 + 190429646 C e nomLeu3.chr7b 112736415 0 + 115148730 C e gorGor5.CYUI01015356v1 3845963 0 + 4876863 C e panPan2.chr4 192808737 0 + 195804263 C e panTro5.chr4 192925082 0 + 194502333 C e otoGar3.GL873580 11252415 1233 - 11315646 M a score=0.000000 s hg38.chr4_KI270789v1_alt 137681 304 + 205944 ttttttttttttttttttttgagacggagtctcgctctgtggctcaggctggagtgcagtggcgcgatctcgactcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccatcacgcccggctaatttttttgtatttttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaagcgtgagccactgcgcccggcc e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2794519 1992 - 2847728 I e chlSab2.chr7 134340486 0 + 135778131 C e cerAty1.NW_012001672v1 3382822 0 + 4669795 C e macNem1.NW_012013133v1 24353090 0 - 25927173 C e macFas5.chr5 187961379 0 + 189454096 C e rheMac8.chr5 189018601 0 + 190429646 C e nomLeu3.chr7b 112736415 0 + 115148730 C e gorGor5.CYUI01015356v1 3845963 0 + 4876863 C e panPan2.chr4 192808737 0 + 195804263 C e panTro5.chr4 192925082 0 + 194502333 C e otoGar3.GL873580 11252415 1233 - 11315646 M a score=1549087.000000 s hg38.chr4_KI270789v1_alt 137985 327 + 205944 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataa-gtgtaaggaagggatccagtttcagctttctacatatggttacccagttttcccagcaccatttattaaacagggaatcctttccccattccttgtttttgtcaggtttgtcaaagatcagatgcttgtagatgtatggtgttatttctgaggcctctgttctgttccattggtctatatatttgttttcgtaccagtaccatgttgttttcgttactgtagccttgtagtatactttgaagttaggtagcatga s panTro5.chr4 192925082 322 + 194502333 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataa-gtgtaaggaagggatccagtttcagctttc-----atggttacccagttttcccagcaccatttattaaatagggaatcctttccccattccttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatttgttttggtaccagtaccatgttgttttggttactgtagccttgtagtatagtttgaagttaggtcgcatga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192808737 322 + 195804263 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataa-gtgtaaggaagggatccagtttcagctttc-----atggttacccagttttcccagcaccatttattaaatagggaatcctttccccattccttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatttgttttggtaccagtaccatgttgttttggttactgtagccttgtagtatagtttgaagttaggtcgcatga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3845963 327 + 4876863 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataa-gtgtaaggaagggatccagtttcagctttctacatatggttacccagttttcccagcaccatttattaaatagggaatcctttccccattccttgtttttgtcaggtttgccaaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatttgttttggtaccaataccatgttgttttggttactgtagccttgtagtatagtttgaagttaggtagcatga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736415 327 + 115148730 tcttccagggattttatagttgtaggtcttacatttaagtctttaatccatcttgaattaatttttgtataa-gtgtaaggaagggatccagtttcagctttctacatatggttacctggttttcccagcaccatttattaaatagggactcctttccccattccttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgtcatttctgaggcctctgttctgttccattggtctatatatttgttttggtaccagtaccatgttgttttggttactgtagccttgtagtatagtttgaagttaggtagcatga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018601 326 + 190429646 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaattttcgtataaggtataaggaagggatccagtttcagctttctacatat-gttacccagttttcccagcaccatttattaaatagggaatcc-ttccccatttcttgtttttatcaggtttgtcgaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgctctgttccattggtttatatatttgttttcataccagtaccatgctgttttggttacagtagccttgtagtatagtttgaagttaggtagcatga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961379 326 + 189454096 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataaggtataaggaagggatccagtttcagctttctacatat-gttacccagttttcccagcaccatttattaaatagggaatcc-ttccccatttcttgtttttgtcaggtttgtcgaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtttatatatttgttttcataccagtaccatgctgttttggttacagtagccttgtagtatagtttgaagttaggtagcatga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353090 326 - 25927173 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataaggtataaggaagggatccagtttcagctttctacatat-gttacccagttttcccagcaccatttattaaatagggaatcc-ttccccatttcttgtttttgtcaggtttgtcgaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtttatatatttgttttcataccagtaccatgctgttttggttacagtagccttgtagtatagtttgaagttaggtagcatga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3382822 326 + 4669795 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatat-gttacccagttttcccagcaccatttattaaatagggaatcc-ttccccatttcttgtttttgtcaggtttgtcaaagatctgatggttgtagatgtgtggtgttatttttgaggcctctgttctgttccattggtttgtatatttgttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagttaggtagcatga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134340486 327 + 135778131 tcttctagggattttatagttttaagtcttacatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacgtat-gttacgcagttttcccagcaccgcttattaaatggggaatcctttccccatttcttgtttttgtcaggtttgtcaaagatcagatggttgtacatgtgtggtgttatttctgaggcctctgttctgttccattggtctatatatttgttttcgtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagttaggtagcacga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2796511 326 - 2847728 tcttctagggattttatagttttaggtcttacatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatat-gttacccagttttcccagcaccatttattaaatagggaatcc-ttccccatttcttgtttttgtcaggtttgtcgaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttccattggtttatatatttgttttcgtaccagtaccatgctgttttgcttactgtagccttgtagtatagtttgaagttaggtagtatga i manLeu1.NW_012102221v1 I 1992 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e dasNov3.JH570353 1473683 220 - 2520184 I e canFam3.chr16 16975574 0 - 59632846 C e mm10.chr8 86626254 114 - 129401213 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=176839.000000 s hg38.chr4_KI270789v1_alt 138312 25 + 205944 tAGCATCACAATTCTATACACATTT s panTro5.chr4 192925404 25 + 194502333 tAGCATCACAATTCTATACACATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809059 25 + 195804263 tAGCATCACAATTCTATACACATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846290 25 + 4876863 tAGCATCACAATTCTATACACATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736742 25 + 115148730 tAGCATCACAATTCTACACACATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018927 25 + 190429646 tAGCATCACAATTCTACACACATTT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187961705 25 + 189454096 tAGCATCACAATTCTACACACATTT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24353416 25 - 25927173 tAGCATCACAATTCTACACACATTT i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3383148 25 + 4669795 tAGCATCACAATTCTACACACATTT i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134340813 25 + 135778131 tAGCATCACAATTCTACACACATTT i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2796837 25 - 2847728 tAGCATCACAATTCTACACACATTT i manLeu1.NW_012102221v1 C 0 I 1 s mm10.chr8 86626368 25 - 129401213 TACCTTCACCGTTTTACACACATGT i mm10.chr8 I 114 I 1 s canFam3.chr16 16975574 25 - 59632846 TAGCATTACATATCTATATACTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473903 25 - 2520184 TAGCATCACAATTCTATGCAAATTT i dasNov3.JH570353 I 220 C 0 e calJac3.chr3 189639220 286 - 190850796 I e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e saiBol1.JH378165 13121140 4959 - 14256875 M e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=74109.000000 s hg38.chr4_KI270789v1_alt 138337 16 + 205944 -CAGGAATGATTTTTTT s panTro5.chr4 192925429 16 + 194502333 -CAGGAATGTTTTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809084 15 + 195804263 -CAGGAATG-TTTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846315 16 + 4876863 -CAGGAGTGATTTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736767 15 + 115148730 -CAGGAATG-ATTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018953 15 + 190429646 -CAGGAATGATTTTTT- i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187961731 15 + 189454096 -CAGGAATGATTTTTT- i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24353442 15 - 25927173 -CAGGAATGATTTTTT- i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3383174 15 + 4669795 -CAGGAATGATTTTTT- i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134340839 15 + 135778131 -CAGGAATGATTTTTT- i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2796863 15 - 2847728 -CAGGAATGATTTTTT- i manLeu1.NW_012102221v1 I 1 C 0 s calJac3.chr3 189639506 15 - 190850796 -cAGGAATCATTTTTA- i calJac3.chr3 I 286 C 0 s saiBol1.JH378165 13126108 15 - 14256875 -CAGGAATGATTTTTA- i saiBol1.JH378165 M 4959 C 0 s mm10.chr8 86626394 15 - 129401213 -AAAGGGTGATTCATT- i mm10.chr8 I 1 I 1 s canFam3.chr16 16975599 14 - 59632846 -AATGGATTAGTTTT-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473928 15 - 2520184 AAAGGAATGATTTTT-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e micMur3.chr14 17526051 712 - 93316391 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=165853.000000 s hg38.chr4_KI270789v1_alt 138353 23 + 205944 AAAGAGACAACCTCAATTCTTAA s panTro5.chr4 192925445 23 + 194502333 AAAGAGACAACCTCAATTCTTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809099 23 + 195804263 AAAGAGACAACCTCAATTCTTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846331 23 + 4876863 AAAAAGACAACCTCAATTCTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736782 23 + 115148730 AAAAAGACAACCTCAATTCTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018968 22 + 190429646 -AAAAGATGACCTCAATTCTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961746 22 + 189454096 -AAAAGACGACCTCAATTCTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353457 22 - 25927173 -AAAAGACGACCTCAATTCTTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383189 22 + 4669795 -AAAAGACAATCTCAATTCTTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134340854 22 + 135778131 -AAAAGACAACCTCAATTCTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2796878 22 - 2847728 -AAAAGACAACCTCAATTCTTAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639521 18 - 190850796 -AAAAGGCAACCTCAATTC---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126123 18 - 14256875 -AAAAGGCAACCTCCATTC---- i saiBol1.JH378165 C 0 C 0 s micMur3.chr14 17526763 23 - 93316391 AAAAAGACAAACTCAGTTCTTAC i micMur3.chr14 I 712 C 0 s mm10.chr8 86626410 21 - 129401213 CAAGAGCTAACTTTACTT--TAA i mm10.chr8 I 1 C 0 s canFam3.chr16 16975613 23 - 59632846 AAAATGATTGCCTTAGTTCTTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473943 23 - 2520184 AAAAAGACCACTTCTGTTAATAT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e aotNan1.NW_018492112v1 3413201 326 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=11849.000000 s hg38.chr4_KI270789v1_alt 138376 1 + 205944 T s panTro5.chr4 192925468 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809122 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846354 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736805 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018990 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961768 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353479 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383211 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134340876 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2796900 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639539 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126141 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3413527 1 - 5030052 T i aotNan1.NW_018492112v1 I 326 C 0 s micMur3.chr14 17526786 1 - 93316391 T i micMur3.chr14 C 0 C 0 s mm10.chr8 86626431 1 - 129401213 C i mm10.chr8 C 0 C 0 s canFam3.chr16 16975636 1 - 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1473966 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1018403 349 - 2196201 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=1586151.000000 s hg38.chr4_KI270789v1_alt 138377 146 + 205944 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTACAAATAGTCATTTTGAAGTT s panTro5.chr4 192925469 146 + 194502333 -GATTTTTAAATTTTTGTAAAATAATCAGATG----CAACCAAT-GGACTGATTGAGTAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTACAAATAGTCATTTTGAAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809123 146 + 195804263 -GATTTTTAAATTTTTGTAAAATAATCAGATG----CAACCAAT-GGACTGATTGAGTAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTACAAATAGTCATTTTGAAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846355 146 + 4876863 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCTAGT-CTTCTGTGTATAAGGTAGGCTTAATTTTACAAATAGTCATTTTGAAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736806 146 + 115148730 -GATTTTTAAAGTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189018991 146 + 190429646 -GATTTTTAAATATTTGTAAAAAAATCAAATG----CAACCAGT-GGACTGATTGAATAAATCTACTTTTCCATTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961769 146 + 189454096 -GATTTTTAAATATTTGTAAAAAAATCAAATG----CAACCAGT-GGACTGATTGAATAAATCTACTTTTCCATTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353480 146 - 25927173 -GATTTTTAAATATTTGTAAAAAAATCAAATG----CAACCAGT-GGACTGATTGAATAAATCTACTTTTCCATTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383212 146 + 4669795 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CGACCAGT-GGACTGATTGAATCAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134340877 146 + 135778131 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CAACCAGT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2796901 146 - 2847728 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CAACCAGT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTGATGGGCCCTAAATTTCCAAGT-CTTCTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639540 146 - 190850796 -GATTTTAAAATTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTCATGGGCCCAAAATTTTCAAGT-CTTGTGTGTATAAGGTGGGCTTAACCTTAAGAATAGTCATTTTGAAGTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126142 146 - 14256875 -GATTTAAAAATTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTTCGTTTTTGTTTATGGGCCCAAAATTTCCAAGT-CTTGTGTGTATAAGATGGGCTTGATTTTAAGAATAGTCATTTTGAAGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1018752 146 - 2196201 -GATTTTTAAATTTTTGTAAAATAATCAAATG----CAACCAAT-GGACTGATTGAATAAATCTACTTTTCCCTTTTTGTTCACGGGCCCCAAATTTCCAAGT-CTTGTGTGTATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTGAAGTT i cebCap1.NW_016107886v1 I 349 C 0 s aotNan1.NW_018492112v1 3413528 137 - 5030052 -GATTTTAAAATTTTTGTAAAATAATCAAATG----CA--CAATGGGACTGATTG---AAATCTACTTTTCCC-TTTTGTTCATGG---CCAAATTTCCAAGTCCTTGTGTGTATAAGGTGGGCTTAATTTTAAGAAT--TAGTCTTGAAGTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17526787 142 - 93316391 --GATTTAAAATTTTCATAAAATAGTCAAATG----CAACCAAC-AGAC---TTAAATCAATCCATTATTTCCTTTCTGTTGAGGGGCCCTAAATTGCAGAGT-CTTCTATATATAAGGTGGGCTTAATTTTAAGAATAGTCATTTTAAAGAT i micMur3.chr14 C 0 C 0 s mm10.chr8 86626432 145 - 129401213 -TGATATTAACCTTTTGTAAAATTGTCATGCGTGCACAACTAGC-ATGCTGAGTAAGTCAGT-TAAATTTTCTTTACTACTAAGGCACCCTGAGTTCCCAAGT-GTTGTATGAGCATGGT-GGtttaa---taaaaaatgttaaattaaattt i mm10.chr8 C 0 C 0 s canFam3.chr16 16975637 143 - 59632846 -AAGATTTAAGTCTTCACAAAATAGTCAAATT----AAGCCAGT-GTGCTAATTAAATAATT---TTTTTTTCTATCTGTTGAAGGGCCTTAAATTTGCAAGT-CTCATACTTTAAATGTGGGCTTAATTTTGAGAATAGTCATTTTAAactt i canFam3.chr16 C 0 I 816 s dasNov3.JH570353 1473967 127 - 2520184 GAGATTTCAGGGTTTTGTC-----------------CAACTGGT------GATTAAATAAATC--CCTTTTCCTTTCCCTTGAGGGATCCTTAATTTCCAAGT-TTTCTATGTTTAAAGTTGGATTAGTTTTAAGAATAGTCATTTTAAAATT i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=78184.000000 s hg38.chr4_KI270789v1_alt 138523 12 + 205944 AAAATAACTTGT--- s panTro5.chr4 192925615 12 + 194502333 AAAATAACTTGT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809269 12 + 195804263 AAAATAACTTGT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846501 12 + 4876863 AAAATAACTTGT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736952 12 + 115148730 AAAATAACTTGT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019137 12 + 190429646 AAAATAACTTGT--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961915 12 + 189454096 AAAATAACTTGT--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353626 12 - 25927173 AAAATAACTTGT--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383358 12 + 4669795 AAAATAACTTGT--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341023 12 + 135778131 AAAATAACTTGC--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797047 12 - 2847728 AAAATAACTTGT--- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639686 12 - 190850796 AAAATAACTTGT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126288 9 - 14256875 AAAATAGT---T--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1018898 12 - 2196201 ATAATAACTTGT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3413665 11 - 5030052 A-AATAACTTGT--- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17526929 11 - 93316391 GGATTAAA-TGG--- i micMur3.chr14 C 0 C 0 s mm10.chr8 86626577 12 - 129401213 aGAACAACTGAT--- i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1474094 11 - 2520184 ----GGCCTCATTGA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16975780 816 - 59632846 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=811268.000000 s hg38.chr4_KI270789v1_alt 138535 72 + 205944 TTTCTGTATACCCAATTTTAAAATTCAGAATGCCATATCAGCCACTTTATGGATAATTTCTCACATACTTCT s panTro5.chr4 192925627 72 + 194502333 TTTCTTTATACCCAATTTTAAAATTCAGAATGCCATATCAGCCACTTTATGGATAATTTCTCACATACTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809281 72 + 195804263 TTTCTTTATACCCAATTTTAAAATTCAGAATGCCATATCAGCCACTTTATGGATAATTTCTCACATACTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846513 72 + 4876863 TTTCTTTATACCCAATTTTAAAATTCAGAAAGCCATATCAGCCACTTTATGGATAATTTCTCACATACTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112736964 72 + 115148730 TTTCTTTATACCCAATTTTAAAATTCAGAATGCCATATCAGCCACTTCATGGATAATTTCTCACGTACTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019149 72 + 190429646 TTTCTTTATACCCAATTTTAAAATTCAAAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961927 72 + 189454096 TTTCTTTATACCCAATTTTAAAATTCAAAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353638 72 - 25927173 TTTCTTTATACCCAATTTTAAAATTCAAAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383370 72 + 4669795 TTTCTTTATACCCAATTTTAAAATTCAAAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341035 72 + 135778131 TTTCTTTATACCCAATTTTAAAATTCAGAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797059 72 - 2847728 TTTCTTTATACGCAATTTTAAAATTCAAAATGCCATATCAGCCACTTTATGGATAATATCTCACATACTTCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639698 72 - 190850796 TTTTTTCACATCCAATTTTAAAATTTAGAATGCTGTATTAGCCACTTTGAGGATAATTTCTCACATACTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126297 72 - 14256875 TTTTTTCACATCCAATTTTAAAATTCAGAATGCCATATTAGCCACTTTGAGGATAATTTCTCACATACTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1018910 72 - 2196201 TTTTTTCACACCCAATATTAAAATTCAGAATGCCATGTTAGCCACTTTGAGGATAATTTCTTACATACTTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3413676 71 - 5030052 TTTTTTCACACCCAATTTTAAAATTCAGAA-GCCATATTAGCCACTTTGAGGATAATTTCTCACATACTTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17526940 72 - 93316391 TTTGTGCATGCCCAATTTAAAAATTCAGTATACCATTTCAGCCACTTTGTGGATAATTTCTCACACATTTGT i micMur3.chr14 C 0 I 29 s mm10.chr8 86626589 64 - 129401213 GTTACCCGTACATAAGTTTAAATTTCAAAATACCTCCT--GTCACT----GGTTGATTTTTCATGCACCT-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16976596 72 - 59632846 TTTGTCCATACTCAACTTAAAAATTCACAATTCCATATCAGACACCTTTTTGACAATTTCTCATGCACATTT i canFam3.chr16 I 816 C 0 s dasNov3.JH570353 1474105 72 - 2520184 TTTGTTCAAATCCAATTTAAAAAGTCAGGATGCTATATCAGCCAGTTGTTGAATAATTTTTCAGGTGTTTTT i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=223314.000000 s hg38.chr4_KI270789v1_alt 138607 30 + 205944 TTCTCTG-AATATGAGAATTTTAAAAATTT-A s panTro5.chr4 192925699 28 + 194502333 TTCTCTG-AAT--GAGAATTTTAAAAATTT-A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809353 28 + 195804263 TTCTCTG-AAT--GAGAATTTTAAAATTTT-A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846585 30 + 4876863 TTCTCTG-AATATGAGAATTTTAAAAATTT-A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737036 30 + 115148730 TTCTCTG-AATATGAGAATTTTTTAAATTT-A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019221 31 + 190429646 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187961999 31 + 189454096 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353710 31 - 25927173 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383442 31 + 4669795 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341107 31 + 135778131 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797131 31 - 2847728 TTCTCTG-AATATGAGAATTTCTTTAATTTAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639770 31 - 190850796 TTCTCCG-AATATGAGAATTTTTAAAATTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126369 31 - 14256875 TTCTCTG-AATATGAGAATTTTTAAAATTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1018982 31 - 2196201 TTCTCTG-AATATGAGAATTTTTAAAATTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3413747 32 - 5030052 TTCTCTGTAATATGAGAATTTTTAAAATTTAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86626653 19 - 129401213 -----------ATGCAGATTTTTCT--TTTAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16976668 31 - 59632846 CTCTCTG-AATAGATCCATATTTTTAACTTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1474177 31 - 2520184 CTCTTTG-AATATGTGCATATGTGTCACTTAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17527012 29 - 93316391 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=674632.000000 s hg38.chr4_KI270789v1_alt 138637 54 + 205944 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTCAATTT-C s panTro5.chr4 192925727 54 + 194502333 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTT-C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809381 54 + 195804263 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTT-C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846615 54 + 4876863 TGCAAAAATGTTTCAACTTACAATGGCATCTTTTAATATAACATCTTTAATTT-C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737066 54 + 115148730 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTT-C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019252 55 + 190429646 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962030 55 + 189454096 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353741 55 - 25927173 TGCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383473 55 + 4669795 TTCAAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341138 55 + 135778131 TGCAAAAATGTTTCGACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797162 55 - 2847728 TGCGAAAATGTTTCAACTTACAATGGCATATTTTAATATAACATCTTTAATTTCC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639801 55 - 190850796 TGCAAAAATGTTTCAACTTACAATGGTACATTTTAATATAACATCTTGAATTTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126400 55 - 14256875 TGCAAAAATGTTTCAACTTACAATGGCACATTTTAATATAACATCTTTAATTTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1019013 55 - 2196201 TGCAAAAATGTTTCAACTTACAACGGCACATTTTAATATAACATCTTTAATTTCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3413779 55 - 5030052 TGCAAAAATGTTTCAACTTACAATGGCACATTTTAATATAACATCTTTAATTTCC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527041 54 - 93316391 TGCAAAGAAGTTTCAACTTACAATAGCATATTTTAATGTAAGAGCTCTAATTTC- i micMur3.chr14 I 29 I 1 s mm10.chr8 86626672 52 - 129401213 TGCTGATAAACTTCAACATACAATAGCATA-TTTAATATAACAATTTCA--TTCC i mm10.chr8 C 0 I 1 s canFam3.chr16 16976699 54 - 59632846 TGCAAAGAAATTTCAACTTACAACTGCATATTTTAATATAACATCTTTAATTTC- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1474208 55 - 2520184 TGCAAAGAAATATCCACTTACAATTGCAGATTTTAATATAAGAGTTTTAATTTTC i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11252415 1233 - 11315646 M a score=7283780.000000 s hg38.chr4_KI270789v1_alt 138691 572 + 205944 AACTTTTTCCTTTTGGATATACTTTTATAGAAAGGAATTCAGTATTTA--------TTAAACCACTATTTT-CTTCATCTATTGGCAGTGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---GTTTGAAGGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCGATGTGATGTGTATGTTTAGAATCACTATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTC-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAATGCAGCAGTTTTCCCTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGAACAGGAAATGCTAGTTGTTGCAATGCAAGCCTGGCAGGCAAGCAC---ACCTCTCTTCCCCAG----GAACTGAGTAAGCCACGATGCTCAACTCCAGTGACTG s panTro5.chr4 192925781 572 + 194502333 AACTTTTTCCTTTTGGATATACTTTTATAGAAAGGAATGCAGTATTTA--------TTAAACCACTATTTT-CTTCATCTATTGGCAGTGTGTTTAAGGAATTCAGTTT---ATACATTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---TTTTGAAGGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCGATGTGATGTGTATGTTTAGAATCACTATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGTGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAATGCAGCAGTTTTCCCTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGAACAGGAAATGCTAGTTGTTGCAATGCAAGCCTGGCAGGCAAGCAC---ACCTCTCCTCCCCAG----GAACTGAGTAAGCCACGATGCTCAACTCCAGTGACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192809435 572 + 195804263 AACTTTTTCCTTTTGGATATACTTTTATAGAAAGGAATGCAGTATTTA--------TTAAACCACTATTTT-CTTCATCTATTGGCAGTGTGTTTAAGGAATTCAGTTT---ATACATTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---TTTTGAAGGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCGATGTGATGTGTATGTTTAGAATCACTATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGTGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAATGCAGCAGTTTTCCCTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGAACAGGAAATGCTAGTTGTTGCAATGCAAGCCTGGCAGGCAAGCAC---ACCTCTCCTCCCCAG----GAACTGAGTAAGCCACGATGCTCAACTCCAGTGACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3846669 572 + 4876863 AACTTTTTCCTTTTGGATATACTTTTATAGAAAGGAATGCAGTATTTA--------TTAAACCACTGTTTT-CTTCATCTTTTGGCAGTGTGTTTAAGGAATTCGGTTT---ATACCTTGTGGGAATCTTTTT----CAGATAAACTGTGTATCAAGTAGTTTTGTGGT---TTTTGAAGGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCGATGTGATGTGTATGTTTAGAATCACTATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGACGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAATGCAGCAGTTTTCCCTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGAACAGGAAATGCTAGTTGTTGCAATGCAAGCCTGGCAGGCGAGAAC---ACCTCTCCTCCCCAG----GAACTGAGTAAACCATGATGCTCAACTCCAGCGACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737120 572 + 115148730 AACTTTTTCCTTTTGGATATACTTTTATAGAAAGGAATGCAGCATTTA--------TTAAACCACTGTTTT-CTTCATCTATTGGCAGTGTGTTTGAGGAATTCAGTTT---ATGCCTTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTCGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCAATGTGGTATGTATGTTTGGAATCACTATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAatgcagcagttttcccttcttcttctagctctgtcttagtgggcagagagaacagGAAATGCTAGTTGTTGCAATGCAAGCCTAGCAGGTGAGCAC---ACCCCTCCTCCCCAG----GAACTGAGTAAGCCACGATGCTCAACTCCAGTGATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019307 571 + 190429646 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCGTCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTCT----CAGATAAGCTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCCTTCTGGAGAGCAGACTACTTAAAATTTATATGAACACATTCGATGTAATATGTATGTTTGGAATCACCATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCGTAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGACCAGGAAATGCTAGTTG-TGCAATGCAAGCCTGGCAGGCGAGCAC---ACCTCTCCT-CCCAG----GAGCCGAGTAAGCCATGATGCTCAACTCCAATGACTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962085 571 + 189454096 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCGTCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTCT----CAGATAAGCTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCCTTCTGGAGAGCAGACTACTTAAAATTTATATGAACACATTCGATGTAATATGTATGTTTGGAATCACCATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCGTAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGACCAGGAAATGCTAGTTG-TGCAATGCAAGCCTGGCAGGCGAGCAC---ACCTCTCCT-CCCAG----GAGCCGAGTAAGCCATGATGCTCAACTCCAATGACTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24353796 571 - 25927173 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCGTCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTCT----CAGATAAGCTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGACCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCCTTCTGGAGAGCAGACTACTTAAAATTTATATGAACACATTCGATGTAATATGTATGTTTGGAATCACCATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAACTATTTTTAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCGTAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGACCAGGAAATGCTAGTTG-TGCAATGCAAGCCTGGCAGGCGAGCAC---ACCTCTCCT-CCCAG----GAGCCGAGTAAGCCATGATGCTCAACTCCAATGACTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3383528 572 + 4669795 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCGTCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTCT----CAGATAAGCTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCCTTCTGGAGAGCAGACTACTTAAAATTTATATGAACACATTCGATGTAATATGTATGTTTGGAATCACCATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCGTAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCCTCTTCTAGCTCTTTCTTAGTGGGCAGTGAGACCAGGAAATGCTAGTTG-TGCAATGCAAGCCTGGCAGGCAAGCAC---ACCTCTCCTCCCCAG----GAACCGAGTAAGCCATGATGCTCAACTCCAATGACTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341193 573 + 135778131 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCATCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGCGGGAATCTTTTT----CAGATAAACCGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAGCCCTTAGTGCTTTCTGGAGAGCAGACTACTTAAAATTCATATGAACACATTCAATGTAATATGTATGTTTGGAATCACCACTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACATGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGGGGACATAGTAAAATC-TCTGCTTCCATAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGACCAGGAAATGCTAGTTGTTTCAATGCAAGCCTGGCAGGCGAGCAC---ACCTCTCCTCCCCAG----GAACCGAGTAAGCCATGATGCTCAACTCCAATGACTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797217 572 - 2847728 AACTTTTTTCTTTTGGATATACTTTTATAGAAAAGAATGCAGCATTTA--------TTAAACCACTATTTTGCTTCATCTATTGGCAGCGTGTTTAAGGAATTCAGTTT---ATACCTTGTGGGAATCTTTCT----CAGATAAGCTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTGTACAAAGCAACCCTTAGTGCCTTCTGGAGAGCAGACTACTTAAAATTTATATGAACACATTTGATGTAATATGTATGTTTGGAATCACCATTGAACTATTTCTCTATTTAATTGGGG-TGGTTCTTGCTAATTCACGTGGCGGACATTGGCAGCTATTTTCAGTCTACCAATTTTTTCTTT-----GGAGGACATAGTAAAATC-TCTGCTTCCGTAAATGTTTC---CACTTTCTGAATGCTGCAGTTTTCCTTTCTTCTTCTAGCTCTTTCTTAGTGGGCAGAGAGACCAGGAAATGCTAGTTG-TGCAATGCAAGCCTGGCAGGCGAGCAC---ACCTCTCCTCCCCAG----GAACCGAGTAAGCCATGATGCTCAACTCCAATGACTG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189639856 558 - 190850796 AACTTTTTCCTTTTGGATATAGTTTTATGGAAAGGAATGCAGCATTTA--------TTTAACTGCCATTCTTCTTCATCTGTTGGCAGTGTGTTTGAGGAATTCAATTT---ATACCTCGTGGGAATCTTCTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGG-CCACTTATGGTGCTGTGCAAAGCAGCTCGTGGTGCTTTCTGGAGAGCAGACTACTTGACATTTACATGGACACATTCGATGTAATATGTAAATTTGAAATCACCATTGAAATGTTTCTC--TTTAATTGGGG-TGGTTCATGCTAATTCACAACGCGGACATTGGTAGCTATTTTCAGTCTACAGATTATTTCTCT-----GGGAGACATAGTAAAATC-TCTGCTTCCCTTAACCCTTCCAGCACTTTCTCCATGCAGCA-TTTTCC---CTTCTTCTAGCTCTGTC-TAGTGGGCAGAGAGAAGAGGAAACGCT--TTGTCGCCATGCGAGCATGGCAG-----------ACCTCTCCTCCCCAG----GAACTGAGCACGCCATGATGCTCAGCTCCAGTGGCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13126455 564 - 14256875 AACTTTTTCCTTTTGGATATACTTTTAT-GAAAGAAATGCAGCATTTA--------TTAAACCACTGTTTTTCTTCATCTGTTGGCAGTGCGTTTGAGGAATTCAATTT---ATACCTTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGG-CCACTTATGGTGCTGTGCAAAGCAGCCCGTGGTGCTTTCTGGAGAGCAGACTACTTGAAATTCACATGGACACATTGGATGTAATATGTATATTTGAAATCACCATTGAAATGTTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACAACGCGGACATTGGCAGGTATTTTCAGTCTACAAATTATTTCTCT-----GGGGGACATAGTAAAATC-TCTGCTTCCCTAAATTCTTC---CACTttcttcatgcagca--tttcc---cttcttctagctctgtcttcgtgggcagagagaacagGAAACGCT--TTGTGGCCATAGGAGCATGGCCGAGGAGCAC---ACCTCTCTTCCCCAG----AAACTGAGCACACCATGATGCTCAGCTCCAGTGACTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1019068 563 - 2196201 AACTTTTTCCTTTTGGATACACTTTTATGGAAAGGAATGCAGCATTTA--------TTAAACCACTATTTTTCTTCATCTGTTGGCAGCGTGTTTGAGGAATTCAATTT---ATACCTTGTGGGAATCTTTTT----CAGATAAACTGTATAGCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGG-CCACTTATTGTGCTGTGCAAAGCAGCCCGTGGTGCTTTCTGAAAAGCAGACTACTTGAAATTCACATGGACACATTCGATGTAATATGTATATTTGAAATCACCATTGAAATATTTCTCTATTTAATTGGGG-TGGTTCATGCTAATTCACAACGCGGACATTGGCAGCGATTTTCAGTCTACAGATTATTTCTCT-----GGGGGACATAGTAAAATC-TCTGCTTCCCTAAATGCTTC---CACTTTCTTCATGCAGCA--TTTCC---CGTCTTCTAGCTCTGTCTTAGTGGGCAGAGAGAACAGGAAA--CT--TTGTGGCCATGGGAGTGTGGCAGAGGAGCAT---ACCTCTCCTCCCCAG----GAACTGAGCACGCCATGATGCTCAGCTCCAGTGACTG i cebCap1.NW_016107886v1 C 0 I 459 s aotNan1.NW_018492112v1 3413834 566 - 5030052 AACTTATTCCTTTTGGATATACTTTTATGGAAAGGAATGCAGCATTTA--------TTAAACCACTATTTTTCTTCATCTGTTGGCAGTATGTTTGAGGAATTCAATTT---ATACCTTGTGGGAATCTTTTT----CAGATAAACTGTATATCAAGTAGTTTTGTGGT---TTTTGAAAGAACTTTTTGGCATTCAGG-CCACTTATTGTGCTGTGCAGAGCAGCCCGTGGTGCTTTCTGGAGAGCAGACTACTTGAAATTCACATGGACACATTCGATGTAATATGTATATTTGAAATTACCATTGAAATATTTCTCTATTTAATTGGGC-TGGTTCATGCTAATTCACAATTTGGACATTGGCAGCTATTTTCAGTCTACAAATTCTTTCTCT-----GGGGGACATAGTAAAATC-TCTGCTTCCCTAAATGCTTC---CACTttcttcatgcagca-tttccc---cttcttctagctctgtcttagtgggcagagagaacagGAAACGCT--TTGTTGCCATGCGAGCGTGGCAGAGGAGTAC---ACGTCTCCTCCCCAG----GAACTGAGCATGCCATGATGTTCGGCTCCAGTGACTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527096 576 - 93316391 AATATTTTCCTTTTGGATATAC-TTTATGGTAAGGAAGGCAGCCTTTC--------TTAAATCATTATTTTGCTTCATCT-TGGGCAGTGTGTTTAAGGAATTTAATTT---ATACCTTGTGGGAATTTTTTTTT-CCAGGTAAACTGTATATCAAGTAGTTTCGTGGGGTTTTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTATGCTATGCAAAACAGTTCTTAGTGCTTTCCAGAGAGCAGACTCCTTAAAATTCATTTGGAAATGTTAGATGTAATATGCATATTTGGAATAGCCATTGAGATAGTTCTCTATGTAATTGGGG-TGGTCCATGCTAAATCACAGGGTGGAGACTGGCAGCTATTTTCAGTCTACCAATTATTTCTTT-----GGGGGACTTGATAAAACT-TCTGATGCAGTGAATGTTTC---TACTTTCTTAATGCAGCAGTTTCTCCTCCTTCTTCCAGCTCTATCTTAGTAATCAGAGAGAACAAGAACTGCTAGCTCTTGCAATGCAAACCCAGCAGGCAAACAC---ACACCTCGC-CCCAG----GAACTGAGCAAGCCACAGTGTTTAACTCCAACGATTG i micMur3.chr14 I 1 C 0 s otoGar3.GL873580 11253648 563 - 11315646 AATATTTTTCTTTTGGAATCACTTTTATGAAAAGGAGGGAAGCCTTTC--------TTAAACCACTATTTTACTTCATCTGTGGGCAGCATGTTTAAGGAATTTAATTT---ATGCCTTGTGGGAAATTTTTTTT--CAAGTAAACTGTATATCAAGTAATTTCATGGA---TTTTGAAAGAACTTTTTGGCATTCAGGGCCATTTCTTGTGCTAT-CAAAGCAGTACTTAGTGCTTTCCAGAGAGCAGACTACTTAAAATTCATGTGGGCACTTTAGATGTAAGATACATATTTGAAATAACCATTGAAATATTCCTCTATGTAATTGGGC-TGGTCCGTGGTAATTCTCAGGGTGGACACTGGCAGCTATTTTCAGTCTACCAGTTATTTCTTT-----GGGGAACAGGATAAAACC-TTTACTTTGGTAAATGTTTC---CACTTTCCTACTGCACCAATT--TCCATCTTCCTCCACTTCTCTCTTAGTAGGAAGAGAGAACGAGAAATGCTA----TTGCAATGCAAGCCCAGCAGGCGGGCAC---ACGCCTTGC-CCCAG----AAACTGAGCAAGCCACAGTGCTGAGCT----CAATTG i otoGar3.GL873580 M 1233 C 0 s mm10.chr8 86626725 582 - 129401213 AATGTTTACCTTTCAGATGGAATTTTATGTAAAGGAATGCAGTGCCTGACTCGCACTTAAACCACAGTTTTGCTTCATCTGTGAGCAGTATGTTTAAGGAATTCAATTTATGATACCTTTTGGGAATTTTTTTTT-TAAGGCACACTGTATATCAAGTAGTTTTGCGGT---TTTTGAAGGAACTTTTTGGCATGCAGGGCCATTCCTCAAGCTGTGGAAAGCAATCCTTTGTGCTGTCTGGGCAGCAAACTACTCAAAATGCACCTAGAAACATTAGCTGTGATATGTATATTTGG-GCAAGCATTGAATTATTTCTCTATTTAATTGGGA-TCCTTCACG-TAACCCACAGTGCAGACACAGTCAGCTATCTGCAGTCTGCCAATTATTTCTTT-----GGGGTACATGGTAAGAAC-TCTGCCTCACTAAAGTTTTC---CACTCTTTTCATGTAGCTATCCTTCCACCCT-TTCCAGCTCTTTCTCAGTGGGCAAGGAGAGCAAGCAATGTTAGCTGCCCCAATGCTAGCACAGCAAAAGGGTGT---ATGTGCTTTTCTCAG-----AATTGGGCCAGCCATGATGCTGAGGTCCC-TGACTG i mm10.chr8 I 1 C 0 s canFam3.chr16 16976754 582 - 59632846 AATGTTTTCCTTTTGGATATAA-TCTATA-AAAGGAATGACGTTTTTATCTCTGGCTTAAATCACTATTTCACTTCATCTGTGGGAAGTGTGTTTAAGCAAGTCAATATGCGATACCTTGTGGGATTTTTTTTTTTCCAGGTGAACTGTATATCAAATAGCTTTGTGGT---TTTTGAAGGAACTTTTTGGCATTCAAGACCATTTCTT-TGCTGTGCAAAGCACTCCTCAGTGCTTTCTGGAGAACAGACTACTTAAAATTCATATGGACATATTAGGCATAATATGTATATTTGGATTAACCATTGAAATATTTCTCTATTTAATTGGAG-TAGTCTATGCTAACTCACGGGGTGGACATTGTCAGCTATTTTCAATCTACCAATTATTTCTTT-----TGGGGGCATGGTAAAATC-TCTGCTTCAGTAAATGTTTT---CACTTTCTTCATGCAGTAGTTTTCC---CTCCTTCCAGCTCTATCTCAGTGGGCAGAGAGAGCAAGAAATGTTAGCTGACATAATGCAAGTATGGCAGAAGAGGCC---ACACACCTTCCCCTG----CAAGGAAGCAAGCATGGATACTCAGTTCCAGTATTTG i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1474263 569 - 2520184 AATATTTTCTTTTTGGACATAATTTTATGTAAAGGAATGCAACATTTATCTCTGATTTAAATCACAATTTTGCTTCATCTGCAGGCAATGTGTTTAAGGAATTCAATTTATGATCCCTCGTGGGGATTCTTTT----CAGGTCAACTGTATATCAAATAGCTCAGTGGT---TTTGGCAGCAACTTGTTGGCATGCAGGACCATTGCTAGGGCTGTGCAGAGCAGTC-------CTTTCTGGGGAACCGAGAACTTAAAATTCATGTAAA---ATTC-ATGTAGTATGTAGATTTGGAATAACCATCGAAACACTTCTCTATTTAATTGGGGTTGGACCACAGTAATTCAGA--GTGGACACT--CAGCTATTTTCAGCCTGCCAGTTATTTCTTTGCAGAGGAGGGCATGGTAAAATTGTCTGCTGCAGAAAAGG-TTC---CATTTCCTTAACACAGCAGTTTTCTCTTCTCCATCCAGCTCTATTTTAGTGGGCAGAGAACACAAGAAAGGCTAGCTGCCAAAATGAAAGCATGGCAGGAGGAAACATAACTCTTTCTCCCCAGCCTGAACTTGAGCAAGC-------------TCCAGTGGCTG i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=184070.000000 s hg38.chr4_KI270789v1_alt 139263 21 + 205944 TTGAATTTCAACAGCTGCACC s panTro5.chr4 192926353 21 + 194502333 CTGAATTTCAACAGCTGCACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810007 21 + 195804263 CTGAATTTCAACAGCTGCACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847241 21 + 4876863 CTGAATTTCAACAGCTGCACC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737692 21 + 115148730 TTGAATTTCAACAGTTGCACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019878 21 + 190429646 CTGAATTTTCACAATTGAACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962656 21 + 189454096 CTGAATTTTCACAATTGAACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354367 21 - 25927173 CTGAATTTTCACAATTGAACC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384100 21 + 4669795 CTGAATTTTAACAATTGAACC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341766 21 + 135778131 CTGAATTTTAACAATTGAACC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797789 21 - 2847728 CTGAATTTTAACAATTGAACC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640414 21 - 190850796 CTAAATCCTAATAATTGCACC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13127019 21 - 14256875 CTAAATCGTAATAATTGCACC i saiBol1.JH378165 C 0 I 406 s aotNan1.NW_018492112v1 3414400 21 - 5030052 CTAAATTGTAATAATTGCACC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527672 21 - 93316391 CTGAATTCTAATAATTGCACC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11254211 21 - 11315646 CTGAATTCTAATAATTACGCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627307 21 - 129401213 CTGAATTTTGGTCTTCCCATC i mm10.chr8 C 0 C 0 s canFam3.chr16 16977336 21 - 59632846 CTGAACGGTAACAAGTGTGCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1474832 21 - 2520184 CACAATGTGTAAAGCTGTCCC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=10176.000000 s hg38.chr4_KI270789v1_alt 139284 1 + 205944 C s panTro5.chr4 192926374 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810028 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847262 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189019899 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962677 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354388 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384121 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341787 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797810 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640435 1 - 190850796 C i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3414421 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527693 1 - 93316391 C i micMur3.chr14 C 0 I 63 s otoGar3.GL873580 11254232 1 - 11315646 A i otoGar3.GL873580 C 0 I 18 s mm10.chr8 86627328 1 - 129401213 C i mm10.chr8 C 0 C 0 s canFam3.chr16 16977357 1 - 59632846 C i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1474853 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e saiBol1.JH378165 13127040 406 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e nomLeu3.chr7b 112737713 0 + 115148730 C a score=366736.000000 s hg38.chr4_KI270789v1_alt 139285 56 + 205944 TCTCTTTTTAC-CCCTGGTGTCACAT--AGAGCATATGCTCTTGGACATTCAGGAAATC s panTro5.chr4 192926375 56 + 194502333 TCTCTTTTTAC-CCCTGGTGTCACAT--AGAGCATATGCCCTTGGACATTCAGGAAATC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810029 56 + 195804263 TCTCTTTTTAC-CCCTGGTGTCACAT--AGAGCATATGCCCTTGGACATTCAGGAAATC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847263 56 + 4876863 TCTCTTTTTAC-CCCTGGTGTCACAT--AGAGCATATGCCCTTGGACATTCAGGAAATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737713 55 + 115148730 -CTCTTTTTAC-ACCTGGTGTCACAT--AGAGCATATGCCCTTGAACATTCAGGAAGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019900 56 + 190429646 TTTCTTTTTGC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962678 56 + 189454096 TTTCTTTTTGC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354389 56 - 25927173 TTTCTTTTTGC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384122 56 + 4669795 TTTCTTTTTAC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341788 56 + 135778131 TTTCTTTTTAC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797811 56 - 2847728 TTTCTTTTTAC-CCCTCATGTCACAT--AGAGCATATGCCCTTGAACAGTCAGGAAATC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640436 57 - 190850796 TTTCTTTGTTCACCCCAGTGTCACAG--AGAGCACGTGCCCTCGAACATTCAGTGAAGC i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3414422 53 - 5030052 TTTCTTTGTTCACCCCAGTGTCACAG--AGAGCATGTGCCCTTGAA----CAATGAATC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11254251 56 - 11315646 ttttttttttt-ttttGGTTTCATAT--AGAACATATGGCCTTGAACAGTCAGGCAATC i otoGar3.GL873580 I 18 I 1 s mm10.chr8 86627329 30 - 129401213 -TCTTTGTTTC-TTCTACTG-------------------CCTTGAACAATG-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16977360 53 - 59632846 TATCTTTT----CTCTAGCATCATATAGAGAGCATGTGCCCCCAAATAGTCAAATGA-- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1474854 55 - 2520184 CGTTATTATTT-TTCTAATATCACCT--AGAGCTTATGTCC-AGAGCAGGCAGGAATTC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e micMur3.chr14 17527694 63 - 93316391 I e saiBol1.JH378165 13127040 406 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=531261.000000 s hg38.chr4_KI270789v1_alt 139341 52 + 205944 -AAGTATTGCTTCCATTCTGGCCATGGTGCTAGAAATGCAGGGTTGTATCTCT s panTro5.chr4 192926431 49 + 194502333 -AAGTATTGCTTCCATTCTGGCCGTGGTGCTAGAAATGCA---TTGTATCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810085 49 + 195804263 -AAGTATTGCTTCCATTCTGGCCGTGGTGCTAGAAATGCA---TTGTATCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847319 52 + 4876863 -AAGTATTGCTTCCATTCTGGCCGTGGTGCTAGATATGCAGGGTTGTATCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737768 52 + 115148730 -AAGTATTGCTTCCATTCTGGTCGTGGTGCTAGAAATGCAGGGTTGTATCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189019956 52 + 190429646 -AAGTATTGCTTCCATTCTGGTCATGGTGCTAGAAATGCAGGGTTGTGTCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962734 52 + 189454096 -AAGTATTGCTTCCATTCTGATCATGGTGCTAGAAATGCAGGGTTGTATCTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354445 52 - 25927173 -AAGTATTGCTTCCATTCTGGTCATGGTGCTAGAAATGCAGGGTTGTATCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384178 52 + 4669795 -AAGTATTGCTTCCATTCTGGTCATGGTGCTAGAAATGCAGGGTTGTATCTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341844 52 + 135778131 -AAGTATTGCTTCCATTCTGGTCATGGTGCTAGAAATGCAGGGTTGTATCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797867 52 - 2847728 -AAGTATTGCTTCCATTCTGGTCATGGTGCTAGAAATGCAGGGTTGTATCTCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640493 52 - 190850796 -AAGTATCACTTATATTCTGGCCCTGGTGCTAGAAATGCAGGGTTGTGTCTCT i calJac3.chr3 C 0 I 2 s aotNan1.NW_018492112v1 3414475 52 - 5030052 -AAGTATTGCTTACATTCTGGCCCTGGTGCTAGAAAGGCAGAGTTGTATCTCT i aotNan1.NW_018492112v1 C 0 I 339 s micMur3.chr14 17527757 52 - 93316391 -AGGCATTGCTTAGATTCTGGTCATGGTGCTAGAAATTCAGGGTTATATCTCT i micMur3.chr14 I 63 C 0 s otoGar3.GL873580 11254308 52 - 11315646 -AGGCAGTGCTTGCATTCTGGTCATGATGCTAGCAATGCAGGGTTGTATCTCG i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86627359 51 - 129401213 -AAGGATTGCTTACTTTCTTGTTGTGTCAGTA-AAACACAGGATTTTATCTCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16977413 52 - 59632846 -AAGTATTACTGACCTTCTGGTCATGACGCTAGGATTGCAAgattgcatctct i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1474909 51 - 2520184 AAGGCATTGTTTACA-TCCGGTCA-GGTGCAAAAAATGCAGGATGGGATCTCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e saiBol1.JH378165 13127040 406 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=325408.000000 s hg38.chr4_KI270789v1_alt 139393 44 + 205944 TTACCTCAACCATTTCTGT-CTCCT-CCCTCAGCTCCTAGGAAGCT s panTro5.chr4 192926480 44 + 194502333 TTACCTCAACCATTTCTGT-CTCCT-CCCTCAGCTCCTAGGAAGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810134 44 + 195804263 TTACCTCAACCATTTCTGT-CTCCT-CCCTCAGCTCCTAGGAAGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847371 44 + 4876863 TTACCTCAACCATTTCTGT-CTCCT-CCCTCAGCTCCTAGGAAGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737820 44 + 115148730 TTACCTCAACCATTTCTGT-CTCCT-CCCTCAGCTCCTAGGAAGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020008 44 + 190429646 TTACCTCAACCATTTCTGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962786 44 + 189454096 TTACCTCAACCATTTCTGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354497 44 - 25927173 TTACCTCAACCCTTTCTGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384230 44 + 4669795 TTACCTCAACCGTTTCTGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341896 44 + 135778131 TTACCTCAACCATTTCCGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797919 44 - 2847728 TTACCTCAACCATTTCTGT-CTCCT-CCCTCTGCTCCTAGGAAGCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640547 34 - 190850796 CTGCCCCAACCAT-----------T-CATTAACCTCCTAGGAGGTG i calJac3.chr3 I 2 C 0 s micMur3.chr14 17527809 43 - 93316391 -GTGGTCAACCATTTATGT-TTCCT-CCTTCAGCTCCTAGGAAGCT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11254360 41 - 11315646 -GTGGTCAAACATT--TGT-TTCCT-CCTCCAACTCCTAGGAAGCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627410 44 - 129401213 -GGGGCCAACCTTTTTTATATTTTt-ccatccttccctgggaatct i mm10.chr8 C 0 C 0 s canFam3.chr16 16977465 44 - 59632846 -gtggccaaccacttatgt-ctcctcccctcagtttctaggaatct i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1474960 42 - 2520184 -ATAGACAACGATTTATGT--TCCT-CCTTCAGATCCTAGGAATCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e aotNan1.NW_018492112v1 3414527 339 - 5030052 I e saiBol1.JH378165 13127040 406 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=16682.000000 s hg38.chr4_KI270789v1_alt 139437 3 + 205944 --GCT s panTro5.chr4 192926524 3 + 194502333 --GCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810178 3 + 195804263 --GCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847415 3 + 4876863 --GCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737864 3 + 115148730 --ACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020052 3 + 190429646 --GCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962830 3 + 189454096 --GCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354541 3 - 25927173 --GCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384274 3 + 4669795 --GCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341940 3 + 135778131 --GCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797963 3 - 2847728 --GCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640581 3 - 190850796 --GCT i calJac3.chr3 C 0 I 300 s saiBol1.JH378165 13127446 3 - 14256875 --gcA i saiBol1.JH378165 I 406 C 0 s micMur3.chr14 17527852 3 - 93316391 --GCT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11254401 3 - 11315646 --CCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627454 3 - 129401213 --gat i mm10.chr8 C 0 C 0 s canFam3.chr16 16977509 3 - 59632846 --gca i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1475002 3 - 2520184 GTG-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e aotNan1.NW_018492112v1 3414527 339 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=209806.000000 s hg38.chr4_KI270789v1_alt 139440 20 + 205944 GACTCACCCTTTTCTTGACA s panTro5.chr4 192926527 20 + 194502333 GACTCACCCTTTTCTTGACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810181 20 + 195804263 GACTCACCCTTTTCTTGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847418 20 + 4876863 GACTCACTCTTTTCTTGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737867 20 + 115148730 GACTCACCCTTCCCTTGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020055 20 + 190429646 GACTCACCCTTTTCTTGACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962833 20 + 189454096 GACTCACCCTTTTCTTGACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354544 20 - 25927173 GACTCACCCTTTTCTTGACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384277 20 + 4669795 GACTCACCCTTTTCTTGACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341943 20 + 135778131 GACTCACCCTTTTCTTGACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797966 20 - 2847728 GACTCACCCTTTTCTTGACA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640884 20 - 190850796 GACTCACCCTTTTCTTGACA i calJac3.chr3 I 300 C 0 s saiBol1.JH378165 13127449 20 - 14256875 GACTCACCCTTTTCTTGACA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3414866 20 - 5030052 GACTCACCCTTTTCTTGACA i aotNan1.NW_018492112v1 I 339 C 0 s micMur3.chr14 17527855 20 - 93316391 GAGTCACTGTTTTCTTGACT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11254404 20 - 11315646 AGTTTACTTGCTTCTTGAGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627457 20 - 129401213 gatttatcttttcttggaga i mm10.chr8 C 0 C 0 s canFam3.chr16 16977512 20 - 59632846 gatgtacccatttcttgatg i canFam3.chr16 C 0 I 6 s dasNov3.JH570353 1475005 16 - 2520184 GATCTGCCTCTTTATG---- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1019631 459 - 2196201 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=676943.000000 s hg38.chr4_KI270789v1_alt 139460 55 + 205944 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTGAGATGAACCCCAAACTGGCAC s panTro5.chr4 192926547 55 + 194502333 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTGAGATCAACCCCAAACTGGCAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810201 55 + 195804263 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTGAGATCAACCCCAAACTGGCAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847438 55 + 4876863 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTGAGATGAACCCCAAACTGGCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737887 55 + 115148730 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTGAGATGAACCCCAAACTGGCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020075 57 + 190429646 AGTCCTTCTGGGTAGTCTTCCTGGGTAGCACATCTAAAATGAACCCCAAACTGTCAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962853 57 + 189454096 AGTCCTTCTGGGTAGTCTTCCTGGGTAGCACATCTAAAATGAACCCCAAACTGTCAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354564 57 - 25927173 AGTCCTTCTGGGTAGTCTTCCTGGGTAGCACATCTAAAATGAACCCCAAACTGTCAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384297 57 + 4669795 AGTCCTTCTGGGTAGTCTTCCTGGGTAGCACATCTAAAATGAACCCCAAACTGTCAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134341963 55 + 135778131 AGTCCTTTTGGGTAGTCTTCCTGGGTAG--CATCTAAAATGAACCCCAAACTGTCAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2797986 57 - 2847728 AGTCCTTCTGGGTAGTCTTCCTGGGTAGCACATCTAAAATGAACCCCAAACTGTCAC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640904 55 - 190850796 AGTCCTTCTGGGTGGTCTTCCTGGGTAG--CATCTAAGATGAACCCCAAACTGGCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13127469 55 - 14256875 AGTTCTTCTGGGTAGTCTTCCTGGGTAG--CATCTAAGATGAACCCAAAACGGGCAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020090 55 - 2196201 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTAAGATGACCCCAAAACTGCCAC i cebCap1.NW_016107886v1 I 459 C 0 s aotNan1.NW_018492112v1 3414886 55 - 5030052 AGTCCTTCTGGGTAGTCTTCCTGGGTAG--CATCTAAGATGAACCCAAAACTGGCAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527875 54 - 93316391 AGTCCTTCCTGGTAGTCTTCTTGGGCAG--GATCT-AGTTGAACCCTACACTGGCAC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11254424 53 - 11315646 AGTCCTTCTGGGTAGCACTCCTGGGCAG--GATGT-TATTGAACCCTGTACTGATA- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627477 55 - 129401213 aatccttccaggtaattctctggggcag--gactcaagatgaacccaAAACTGGTAC i mm10.chr8 C 0 C 0 s canFam3.chr16 16977538 55 - 59632846 agtccttctaggaaatccttatggatag--gatttaagatgaaccttagactggcac i canFam3.chr16 I 6 C 0 s dasNov3.JH570353 1475021 48 - 2520184 GGATCCCCTGG------TTCTTGGGCAG--GATCTAAGAGGAACCC-AGACTGGCAC i dasNov3.JH570353 C 0 I 25 e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=1998671.000000 s hg38.chr4_KI270789v1_alt 139515 185 + 205944 A----CTTTCTA--TCT--CTTTCTGTCTGCCACATctggaatcacaataaagaggacactactggtaaggacttcaaatgcatgtcaaatggtcagagccatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagaccaatctgcccactccacagtgggcaccTCTGGACTCTGGG s panTro5.chr4 192926602 185 + 194502333 A----CTTTCTA--TCT--CTTTCTGTCTGCCACATctggaatcacaataaagaggacactgctggtaaggacttcaaatgcatgtcaaatggtcagagccatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagaccaatctgcccactccacagtgggtaccTCTGGACTCTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810256 185 + 195804263 A----CTTTCTA--TCT--CTTTCTGTCTGCCACATctggaatcacaataaagaggacactgctggtaaggacttcaaatgcatgtcaaatggtcagagccatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagaccaatctgcccactccacagtgggcaccTCTGGACTCTGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847493 185 + 4876863 A----CTTTCTA--TCT--CTTTCTGTCTGCCACATctggaatcacaataaagaggacactactggtaaggacttcaaatgcatgtcaaatggtcagagccatgggctctaggaacagatgccagcaagtcacaacaaagggttaaatgagaccaatctgcccactccacagtgggcaccTCTGGACTCTGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112737942 185 + 115148730 A----CTTTCTA--TCT--GTTTCTGTCTGCCACATctggaatcacaataaagaggacactactggtaaggacttcaaatgcatgtcaaatggtcagagccatgggctctaggaacaggtgccagcaagtcacaacaaggggttaaatgagaccgatctgcccactccacagtgggcaccTCTGGACTCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020132 178 + 190429646 A----CTTTCTG--TCT--CTTCCTGTCTGCCACATctagaatcacagtaaagaggacgccactggtaaggacttcaaatgcatgtcaaatggtcagggtcatgggctctaggaacaggtgccagcaagccacaacaaagggttaaatgagacGTATCTGCCCACTCCACAGTGGGCAT-------CTCTGGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187962910 178 + 189454096 A----CTTTCTG--TCT--CTTCCTGTCTGCCACATctagaatcacaataaagaggacgccactggtaaggacttcaaatgcatgtcaaatggtcagggtcatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagacGTATCTGCCCACTCCACAGTGGGCAT-------CTCTGGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354621 178 - 25927173 A----CTTTCTG--TCT--CTTCCTGTCTGCCACATctagaatcacaataaagaggacgccactggtaaggacttcaaatgcatgtcaaatggtcagggtcatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagacGTATCTGCCCACTCCACAGTGGGCAT-------CTCTGGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384354 178 + 4669795 A----CTTTCTG--TCT--CTTCCTGTCTGCCACATctagaatcacaataaagaggacgccactggtaaggacttcaaatgcatgtcaaatggtcagggtcatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagacGTATCTGCCCACTCCACAGTGGGCAT-------CTCTGGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342018 185 + 135778131 A----CTTTCTA--TCT--CTTTCTGTCTGCCACATctagaatcacaataaagaggacaccactggtaaggacttcaaatgcatgccaaatggtcagggtcatgggctctaggaacaagtgccagcaagtcacaacaaagggttaaatgagaccaatctgcccactccacagtgggcaccTCTGGACTCTGGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798043 178 - 2847728 A----CTTTCTG--TCT--CTTCCTGTCTGCCACATctagaatcacaataaagaggatgccactggtaaggacttcaaatgcatgtcaaatggtcagggtcatgggctctaggaacaggtgccagcaagtcacaacaaagggttaaatgagacgtatctgcccacttcacagtgggcat-------cTCTGGG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189640959 186 - 190850796 A----CTTTCTATCTCT--CTTTCTGTCTGCCACATCCACTGTCacaatg-agagggctctactggtaaggacttcaagtgcatgtcaaatggccagggccatgggctctgggaacaggcgccagcaagtcacaccaaagggttaaatgagaccaaactgcccactctgcagtgggcaccTCTGGACTCTGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13127524 187 - 14256875 A----TTTTCTGTCTCT--CTTTCTGTCTGCCACATCCACAGTCACATTGAAGAGTGCTCTACTGGTAAggacttcaaatgcatgtcaaatggccagggccatgggctctaggaacaggtgccagcatgtcacaccaaagggttaaatgagaccaaaccgccctctctgctgtgggcaccTCTGGACTCTGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020145 187 - 2196201 A----CTTTCTATCTCT--CTTTCTGTCTACCACATCCACAGTCACAAGGAATAGGGCTCTACTGGTAAGCACTTCAAATGCACATcaaatggccagggccatgtgctctaggaacaggtgccagcaagtcacaccaaagggttaaatgagaccaaactgcccactctgcggtGGGCACCTCTGGACTCTGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3414941 187 - 5030052 A----CTTTCTATCTCT--CTTTCTGTCTGCCACATCCACAgtcacaatgaagagggctctactggtaaggacttcaaatgcacgtcaaatggccagggccatgggctctaggaacaggtgccagcaagttacaccaaagggttaaatgagaccaaactgcccactctgcagtgggcaccTCTAGACTCTGGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17527929 187 - 93316391 A----CCTTCCA--TCTCCCTGTCCCTCTGCCACATctggggtaacagtgaagagggcaccactggcaaggacttcaaattcatgtcaaatggtcaaagccatgggctctggggacaggtgccagccagtcaccccacagggttaaaagtgacAAACCTACCCACTCCATAGTAGACACCCCGGGACTCTGGG i micMur3.chr14 C 0 I 501 s otoGar3.GL873580 11254477 173 - 11315646 A----CTTTCTA--TCT--CTGCCTCTCTTCCACAGTCAGGGTTACAGTGTAGA----------GACAAAGGCTTCAAATGCATGTCAAATACTCAGGGCTGTGGACTCTGGGGATAGATGGCAGCAGATCACAGGACAGAGTTAAATGAGACCAATCTACCCACTC--GAGTGGAAAGTACAGGACTCTGGA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627532 159 - 129401213 A----TTCTGTA--TTT---TTCTTCTCTGCAGCATTTGGAGATTCAGGGAAAAGGACACCATTG-TAAGAACTTCAGAGACCTATAAAATGGTCAA-------GGCTCTAGAAACATGTGCTAGCAGGTTATAGCAAATGACCAA------------TGTCTGTT-----GTTGATATGTCAAGATTCTGGG i mm10.chr8 C 0 C 0 s canFam3.chr16 16977593 184 - 59632846 agtatctctctG--CCT--CTCTCC-TTTGTCACATCTTGAGTCAAGATGAAGTGGTGACCTCTGGTGAGGACTTCAGATGAAGGTCAAAAAATAAGGGCCATGTGCACTAGGTACAGATGTCAGCAAGTCACAACCAAGGATTAAATGTGACCAATGGACATCCTCCAGAGTAGATATTC----Actatggg i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1475069 25 - 2520184 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=83195.000000 s hg38.chr4_KI270789v1_alt 139700 10 + 205944 TGGATCTGAG- s panTro5.chr4 192926787 10 + 194502333 TGGATCTGAG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810441 10 + 195804263 TGGATCTGAG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847678 10 + 4876863 TGGATCTGAG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738127 10 + 115148730 TGGATCTGAG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020310 10 + 190429646 TGGATCTGAG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963088 10 + 189454096 TGGATCTGAG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354799 10 - 25927173 TGGATCTGAG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384532 10 + 4669795 TGGATCTGAG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342203 10 + 135778131 TGGATCTGAG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798221 10 - 2847728 TGGATCTGAG- i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189641145 10 - 190850796 TTGCTCTGAG- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13127711 10 - 14256875 TTGCTCTGAG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020332 10 - 2196201 TTGCTCGGAG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3415128 10 - 5030052 TTGCTCTGAG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11254650 10 - 11315646 CAGATCCAAG- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627691 10 - 129401213 TAGACCTAAG- i mm10.chr8 C 0 I 7 s canFam3.chr16 16977777 11 - 59632846 tgaatatttat i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475069 25 - 2520184 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=511289.000000 s hg38.chr4_KI270789v1_alt 139710 54 + 205944 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttatttgccagtgaaacagtttt s panTro5.chr4 192926797 54 + 194502333 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttatttgccagtgcaacagtttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810451 54 + 195804263 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttatttgccagtgcaacagtttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847688 54 + 4876863 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttatttgccagtgcaacagtttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738137 54 + 115148730 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttatttgccagtgcaacagtttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020320 54 + 190429646 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttacttgccagtgcaacagtttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963098 54 + 189454096 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttacttgccagtgcaacagtttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354809 54 - 25927173 GACTCTTCTTTGGTCTG------------------Aatgtgttggaaacttacttgccagtgcaacagtttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384542 54 + 4669795 GACTCTTCTTTGGTCTG------------------Aatgtgttggaagcttacttgccagtgcaacagtttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342213 54 + 135778131 GACTCTTCTTTGGTCAG------------------Aatgtgttggaaacttacttctcagtgcaacagtttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798231 54 - 2847728 GACTCTTCTTTGGTCTG------------------Aatgtgttggaagcttacttgccagtgcaacagtttt i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189641155 54 - 190850796 GACACTTCTTCGGTCTG------------------Aatgggttggcaagttacttgccagtgcaatagtttt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13127721 54 - 14256875 GAAGCTTCTTTGGTCTG------------------Aatgtgttggaaacttacttgcctgtgcaatagtttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020342 54 - 2196201 GACCATTCTTTGGTCTG------------------Aatgtgttggaaacttacttgccagtgcaatagtttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3415138 54 - 5030052 GACCCTTCTTTGGTCTG------------------Aatgtgttggaaacttacttgccagtgcaatagtttt i aotNan1.NW_018492112v1 C 0 I 1157 s otoGar3.GL873580 11254660 72 - 11315646 GATCTtgccatggtttaaatgtgtgccccaaagtcaatgtgttagaaacttaatccccaattcaatgatgtt i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16977788 52 - 59632846 gacctctccaaaatt--------------------catatgttgaagccttaatcccctatatgatggtatt i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475069 25 - 2520184 I e mm10.chr8 86627701 7 - 129401213 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=809482.000000 s hg38.chr4_KI270789v1_alt 139764 112 + 205944 gagacatgaaacctttaagagg---------------------------gcagagccctcataagtggactaacaccattatcgtggaagtgggttcattattaagagagtaggcttgttataaaagcaagttcagccc s panTro5.chr4 192926851 112 + 194502333 gagacatgaaacctttaagagg---------------------------gcagagccctcataagtggactaacaccattattgtggaagtgggttcattattaagagagtaggcttgttataaaagcaagttcagcct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810505 112 + 195804263 gagacatgaaacctttaagagg---------------------------gcagagccctcataagtggactaacaccattattgtggaagtgggttcattattaagagagtaggcttgttataaaagcaagttcagcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847742 112 + 4876863 gagacatgaaacctttaagagg---------------------------gcagagccctcataagtggactaacaccattatcgtggaagtgggttcattattaagagagtaggcttgttataaaagcaagttcagcct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738191 112 + 115148730 gagacatgagacctttaagagg---------------------------gcagagccctcataaatggactaacaccattgtcgtggaagtgggttcattattaagagagtaggcttgttataaaagcaagttcagcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020374 112 + 190429646 gagacataggaccttcaagagg---------------------------gcagagccctcataaatggactagtgtcattatcgtggagacaggttcattatcaagaaagtaggtttgttataaaagcaagctcagcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963152 112 + 189454096 gagacataggaccttcaagagg---------------------------gcagagccctcataaatggactaatgtcattatcgtggagacaggttcattatcaagaaagtaggtttgttataaaagcaagctcagcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354863 112 - 25927173 gagacataggaccttcaagagg---------------------------gcagagccctcataaatggactaatgtcattatcgtggagacaggttcattatcaagaaagtaggtttgttataaaagcaagctcagcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384596 112 + 4669795 gagacatgggaccttcaagagg---------------------------gcagagccctcataaatggactaatgtcattatcgtggagacaggttcattatcaagaaagtaggtttgttataaaagcaagctcagctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342267 112 + 135778131 gaggcatgggaccttcaagagg---------------------------gcagagccctcataaatggactaatgtcattatcgtggagacagattcattatcaagaaagtaggtttgttataaaagcaagctcaggct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798285 112 - 2847728 gagacatgggaccttcaagagg---------------------------gcagagccctcataaatggactaatgtcattatcgtggagacaggttcattatcaagaaagtaggtttgttataaaagcgagctcagcct i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189641209 112 - 190850796 tagatgtgtgaccgttaagagg---------------------------gcagagccctcataagtgaataaatgccgttatcatggaaatgggttccttattaagagagcaggtttgttataaaagcaagttcagtcc i calJac3.chr3 C 0 I 932 s saiBol1.JH378165 13127775 111 - 14256875 tagatgtgggaccgttaagagg---------------------------gcagagtcctcataagtggattaatgccattatcatggaactgggttccttattaagagagta-gtttgttataaaaggaagttcagctt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020396 112 - 2196201 tagatgcgggaccgttaagagg---------------------------gcagagccctcataagtggattaatgccattatcatggaaatgggatccttattaagagagtaggtttgttataaaagcaagttcagcct i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11254732 127 - 11315646 gatatgtgagactctcaagaggtaattaggcc---acgag--------aactctgcctttgcgagtggattaatgccaaagtcgagggagtgggttcattatagagagagtgggtctgctacaaaagcaagcttagct- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16977840 97 - 59632846 tggagatgcagactttgggagataattaagtttggatgagggtaaagaagtagaacctcaatgattggattggtgcccttatagag--------------atgaaaagacc---------------------------- i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475069 25 - 2520184 I e mm10.chr8 86627701 7 - 129401213 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=1231230.000000 s hg38.chr4_KI270789v1_alt 139876 205 + 205944 cctcttgctcttgctcttgacctcttttgccgttccactttctgtcatgacataatgcagcatgaaggccct---tgtcagatgtcggcatcatgctc-ttggactt-ccagcctccaga-accatgaaccacataaacttctgttcatcataaattacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- s panTro5.chr4 192926963 205 + 194502333 cctcttgctcttgctcttgacctcttttgccattccactttctgtcatgacataatgcagcatgaaggccct---tgtcagatgtcggcatcatgctc-ttggactt-ccagcctccaga-accatgaaccacataaacttctattcatcataaattacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810617 205 + 195804263 cctcttgctcttgctcttgacctcttttgccattccactttctgtcatgacataatgcagcatgaaggccct---tgtcagatgtcggcatcatgctc-ttggactt-ccagcctccaga-accatgaaccacataaacttctattcatcataaattacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3847854 200 + 4876863 cctcttgc-----ctcttgacctcttttgccgttccacttcccgtcatgacataatgcagcatgaaggccct---tgtcagatgtcggcatcatgctc-ttggactt-ccagcctccaga-accatgaaccacataaacttctgttcatcataaattacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738303 204 + 115148730 cctcttgc-cttgctcttgacctcttttgccgttccactttccgttatgacataatgcagcatgaaggccct---tatcagatgccggcatcatgctc-ttggactt-ccagcctccaga-accatgaaccacataaacttctgttcatcataaattacccagtcttttgtactctattacagcagcataaaacagactaaca---------------caGACCCA--------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020486 199 + 190429646 c------ctcttgctcttgccctgtcttgcctttccactttccatcatgagataatgtagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgagactt-ccagcctccaga-accatgaaccacataaacttctgttcatcgtaatttacccggtctgtagtactttgttacagcagcataaaacagactaaca---------------caCACCCA--------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963264 199 + 189454096 c------ctcttgctcttgccctgtcttgcctttccactttccatcatgagataatgtagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgagactt-ccagcctccaga-accatgaaccacataaacttctgttcatcgtaatttacccggtctgtagtactttgttacagcagcataaaacagactaaca---------------caCACCCA--------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24354975 199 - 25927173 c------ctcttgctcttgccctgtcttgcctttccactttccatcatgagataatgtagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgagactt-ccagcctccaga-accatgaaccacataaacttctgttcatcgtaatttacccggtctgtagtactttgttacagcagcataaaacagactaaca---------------caCACCCA--------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384708 205 + 4669795 cctcttgctcttgctcttgccctctcttgcctttccactttccatcatgagataatgcagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgagactt-ccagcctccaga-accatgaaccacataaacttctgttcatcgtaatttacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342379 205 + 135778131 cctcttgcttttgctcttgctctctcttgcctttccgccttccatcatgagataatgcagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgaaactt-ccagcctccaga-accatgaaccacatagacttctgttcatcgtaatttacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798397 205 - 2847728 cctcttgctcttgctcttgccctgtcttgcctttccactttccatcatgagataatgcagcatgaaggctcc---tgtcagatgccagcatcatgcac-tgagactt-ccagcctccaga-accatgaaccacataaacttctgttcatcgtaatttacccagtctgtggtactctgttacagcagcataaaacagactaaca---------------caGACCCA--------- i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13127886 187 - 14256875 cctcttgctcttactct-------ttttacttttccaccttccttcatgagctaatgcagcagaaaggccct---tgttagatgccagcctcatgatc-tgggactt-ccagcctcca--------gaaccacataaatttctgttcatcgtaagttacccagcctgtggtgtcctggtatagcaacactagacag----gcG---------------CAGCCCCA--------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020508 187 - 2196201 ccccttgctcttactct-------ttttactttcccaccttctatcatgagctaatgcagcagaaaggccct---tgtcagatgccagcctcatgatc-tgggactt-ccagcctgca--------gaaccacataaatttctgttcatcgtaagttacccagcctgtggtatgctggtacagcagcactgaacag----acG---------------CAGCTCCA--------- i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11254859 203 - 11315646 cctcctgctcttgctccctccctctcttgcc---ctgccttctatcacatggagacacaacatgagggccct---catcagatgctggcaccatgctc-ttggacttcccagtctccaga-aatgttggagaaataaatttctgtttattgtgaattactcaatccatgatattccactactgccatataaaatggagtaaga---------------caACCCCA--------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16977937 204 - 59632846 --------tcagttcctttccctctct----------ccctctgctatgtcaagattttgcaagaaggcactgtctgtcaactgggaacaatgtcttcactagacat-gaaatctgctgacaccttgatct---cagatttc---------ccagccaccTAGTCTACAGCACCTTGTTAAACTAGCCCAACCTAAGACAACATCCCAGAACTCTGGGTGAATCCAATGAGCCAA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475069 25 - 2520184 I e mm10.chr8 86627701 7 - 129401213 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=277459.000000 s hg38.chr4_KI270789v1_alt 140081 39 + 205944 TCATCTCCTGACACAGATATAAAGTGAATCCCTAGCAGG s panTro5.chr4 192927168 39 + 194502333 TCATCTCCTGACACAGATATAAAGTGAATCCCTAGCAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810822 39 + 195804263 TCATCTCCTGACACAGATATAAAGTGAATCCCTAGCAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848054 39 + 4876863 TCATCTCCTGACATAGATGTAAAGTGAATCCCTAGCGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738507 39 + 115148730 TCATCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020685 39 + 190429646 TCATCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963463 39 + 189454096 TCATCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355174 39 - 25927173 TCATCTCCTGATACAAATGTAAAGTGAATCCCTAGCAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384913 39 + 4669795 TCATCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342584 39 + 135778131 TCACCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798602 39 - 2847728 TCATCTCCTGACACAGATGTAAAGTGAATCCCTAGCAGG i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128073 39 - 14256875 TCATCTCCTGAGATGGTTGTGAAGTGAACCCTCGTTGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020695 38 - 2196201 TCACCTCCTGACACAGATGCGAAGTGAACCCCC-TCATG i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11255062 39 - 11315646 TTCATCTGTAACACAGTCACAGAGTGACACCCTCCCATG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86627708 38 - 129401213 TCTTTTCTTGATACAGGTATAGACTCAA-CCCTCTCAGA i mm10.chr8 I 7 C 0 s canFam3.chr16 16978141 37 - 59632846 CCACCTCCTG--ACAGACGTAGAGTGGATCCATCCTATG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475069 25 - 2520184 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=2201995.000000 s hg38.chr4_KI270789v1_alt 140120 266 + 205944 CATCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCAAGTAGTG---GAACAGCAGCATACCAATATCTTTCCCACAGA-------------------A-AACC---------TTT-CTAATTTCGTGTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCCGAGGGTCCCCAAA-TTATTCCCAGCCGCCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGCAATATGAGTAGCATTGACA--GTTACTATCTTTGGGCCTCAGTCAAAACAGAGACAGAGAATACCCAT- s panTro5.chr4 192927207 266 + 194502333 CATCTTT----GTCCCTCAGAGAAGTCCTGGA--GGCCAAGTAGTG---GAACAGCAGCATACCAATATCTTTCCCACAAA-------------------A-AACC---------TTT-CTAATTTCCTGTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCCGAGAGTCCCCAAA-TTATTCCCAGCCGCCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGCAATATGAGTAGCATTGACA--GTTACTATCTTTGGGCCTCAGTCAAAACAGAGACAGAGAATACCCAT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192810861 266 + 195804263 CATCTTT----GTCCCTCAGAGAAGTCCTGGA--GGCCAAGTAGTG---GAACAGCAGCATACCAATATCTTTCCCACAAA-------------------A-AACC---------TTT-CTAATTTCCTGTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCCGAGAGTCCCCAAA-TTATTCCCAGCCGCCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGCAATATGAGTAGCATTGACA--GTTACTATCTTTGGGCCTCAGTCAAAACAGAGACAGAGAATACCCAT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848093 265 + 4876863 CATCTTT----GCCCCTCAGAAAAGTCCTGGA--GGCC-AGTAGTG---GAATAGCAGCATACCAATATCTTTCCCACAAA-------------------A-AACC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCCCAGGGTCCCCAAA-TTATTCCCAGCCGCCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGCAATATGAGTAGCATTGACA--GTTACTATCTTTGGGCCTCAGTCAAAACAGAGACAGAGAATACCCAT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738546 266 + 115148730 CATCTTT----GTCCCTCAGAAAAGTCCTGGA--GGTCAAGTAGTG---GAACAGCAGCATACCAATATCTTTCCCACAAA-------------------A-AACC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCTAATGGTCCTCAAA-TTATTCCCAGCCACCTCCTTGCCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGCAATATGAGTAGCATTGACA--GTTACTATCTTGGGGTCTCAGTCAAAACGGAGACAGAGAATACCCAT- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020724 266 + 190429646 CACCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCGATATCTTCCCCACAAA-------------------A-AAAC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTCAT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963502 266 + 189454096 CATCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCGATATCTTCCCCACAAA-------------------A-AAAC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTCAT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355213 266 - 25927173 CACCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCGATATCTTCCCCACAAA-------------------A-AAAC---------TTC-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTCAT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3384952 266 + 4669795 CACCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCGATATCTTCCCCACAAA-------------------A-AAAC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTCAT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342623 266 + 135778131 CACCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCAATATCTTCCCCACAAA-------------------A-AATC---------TTT-CTAATTTCCTCTCCAGTGTTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTCAT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798641 266 - 2847728 CACCTTT----GTCCCTCAGAAAAGTCCTGGA--GGCCCAGTAGTG---GAACAGCAGCATACCGATATCTTCCCCACAAA-------------------A-AAAC---------TTT-CTAATTTCCTCTCCAATATTTCTAAAAGAATGGAGGCAAGTGGTCTTTTAGGGGTCCCCAAA-TTATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATGGTTCTGCAATATGAGTAGCATTGATG--GTTCCTATCCTGGGGCCTCAGTCAAAACTGAGACAGAGAATACTGAT- i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128112 263 - 14256875 CATTTTT----GGCCCTCAGAAGAATCCTGGA--GGCCCAGTGGTG---GAACAGCAGC-TACCAGTATCTTTCCCACAAA------------------GA-AACC---------TTT-CCAATTTTCTTTCCCATATTTCTAAAAGAATGGAGGCAAGTGGTCTTCTAAGGGTCCCCAAA--TATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGGAATATGAATATGATTGACA--GTTATCATCTTGGGGCCTCAGTCAAAACTGAGAT--AGAATACCCAT- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1020733 263 - 2196201 CGTCTTT----GTCCCTCTGAAAAATCCTGGA--GGCCCAGTGGTG---GAACAGCAGC-TCTCAGTATCTTTCCCACAAA------------------GA-AACC---------TTT-CTAATTTCCTCTCCAGTATTTCTAAAAGAATGAAGGCAAGTGGTCTTCTAAGGGTCCCCAAA--TATTCCCAGCCACCTCCTTGGCAAGGTCTGCTTTGATGGATTCACAGATTGTTCTGGAATATGAATATGATTGACA--GTTACCATCTTGGGGCCTCCGTCAAAACTGAGAC--AGAATACCTAT- i cebCap1.NW_016107886v1 C 0 I 120 s otoGar3.GL873580 11255101 253 - 11315646 CATCTTT----GTCCCTCA----------GGA--GACTCAGTAATT-TCAAAAAACAAAACGCCAGTGTCTTTTCTACATA-------------------ACCCCC---------TTT-CTGATTTTC---------TTTCCAAAAGAACAGAGACCAGTGGTCTTCTAAGGGTCACAAAAATTATTCCCAGCTACCTTCTGGTCAAAGTCTATGTTGGTGGATCCATGCTGTGCTCTGCAACGTGGGTACAATTGACATGGTGTCTATCTCAGGGCCTCAGTCAAATCCAAGAAAGAGGATATCCAT- i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86627746 285 - 129401213 CACCTTT----GACCCCAAGGAAACATGTGGT--AGTCCAGTAGCCACCATAGTGAAGTAAAGTAGTATCGTTCCTACAaaaacaaaacaaaacaaaacaa-aacT---------CAT-CTTATTT-CTCATCAATATTTCTCAAAGAATGGAAGTAGAGAGTCTTCTGAGGATCACAAAAATCATTCCCATCTATCTCCTTGATGAAGTTCACTGGGATGGACTT---GACCTAATTGCAGCTCGAATGTAATTTTCA--GTTACTATTCTGGATCTTCAGTTAAGACGGAGAAAGGTAATATTCAT- i mm10.chr8 C 0 I 1 s canFam3.chr16 16978178 254 - 59632846 CATTTTT----GGCCCTCAGAAAATTCCTCAATGGGCACAGTAGTT---AGACAATGGCATACCAGCATCTCTTCTAAAAA-------------------A-AATA---------TTTGTTAATATTCTCTCCAACATTTTTAAAAGAATAAAGGCAGATGGTTTTCTAAAGTTCATAAAAATTAT----------------GACAAGATTTGCTTCAGTGGACTCATATTCTGTTTTGAAAGGTGGGCATGAATGACA--GTTACTAGCTTGAGGCCTCAGCCAAAACTGAGAAAAGGGATATTCAT- i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1475094 277 - 2520184 CATCTTTGGAGGCACTTCTGGAAAGTTCTGGA--GGTGTGGTAGTT---AGACAGCCATACATCAGGATCTCTCTTACAAA-------------------A-AACCCACAAACCTTTC-CTAATTTCCTCTCCAGAATTT-TAACAGAACAGAGGCAGGTGGT-TGCTAAGGATCAAAAAG-TTTGCCCCAGCCACCTCCTT-TCAGGGTCTGTTTTGGTAGACTCGGACCCTGTTTTGCAAGGTGAATATGATTGACA--GTTCCTGTCTTGCAATCTCAGTCAAAATGGAGAAAGAAGAGGTCTGTT i dasNov3.JH570353 I 25 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=268460.000000 s hg38.chr4_KI270789v1_alt 140386 40 + 205944 TTAACAGGCACTCCAACTTAGGTATCCACAGAACGTATAG s panTro5.chr4 192927473 40 + 194502333 TTAACAGGCACTCCAACTTAGGTATCCACAGAACGTATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811127 40 + 195804263 TTAACAGGCACTCCAACTTAGGTATCCACAGAACGTATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848358 40 + 4876863 TTAACAGGCACTCCAACTTAGGTATCCACAGAACGTATAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738812 40 + 115148730 TTAACATGCACTCCAACTTAGGTATCCACAGAATGTACAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189020990 39 + 190429646 TTAACATGCACTCC-ACTTAGGTATCCACAGAAGATACAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963768 39 + 189454096 TTAACATGCACTCC-ACTTAGGTATCCACAGAAGATACAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355479 39 - 25927173 TTAACATGCACTCC-ACTTAGGTATCCACAGAAGATACAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385218 39 + 4669795 TTAACATGCACTCC-ACTTAGGTATCCACAGAAGATACAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342889 38 + 135778131 TTAACATTCACT-C-ACTTAGGTATCCACAGAAGATACAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798907 39 - 2847728 TTAACATGCACTCC-ACTTAGGTATCCACAGAAGATACAG i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128375 40 - 14256875 TTAACATGCACTCTAACTAAGTTATCCACAGACGACATCG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021116 40 - 2196201 TTAACACGCACTCTAACTTAGGTATCCACAGAAGACATCG i cebCap1.NW_016107886v1 I 120 C 0 s otoGar3.GL873580 11255355 40 - 11315646 TTCATATATGCTACAACTCAGGCGTCCATAGAAAATAGAG i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86628032 37 - 129401213 TTAAC-CATACTATGACTAAAGCTGTC--AGAATATATAA i mm10.chr8 I 1 I 6 s canFam3.chr16 16978434 40 - 59632846 TTAACATATATTACAACTAATGTGTGCACTGAATATACAG i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1475371 39 - 2520184 TTAACATAC-CTGTAATTTAGGTCCACAAAGAAAGAGCAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=107280.000000 s hg38.chr4_KI270789v1_alt 140426 20 + 205944 TTTTGTTAT-------------------------TCTCTAT---------------CATG s panTro5.chr4 192927513 20 + 194502333 TTTTGTTAT-------------------------TCTCTAT---------------CGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811167 20 + 195804263 TTTTGTTAT-------------------------TCTCTAT---------------CGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848398 20 + 4876863 TTTTGTTAT-------------------------TCTCTAT---------------CTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738852 20 + 115148730 TTTTGTTAT-------------------------TCTCTAT---------------TATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021029 20 + 190429646 TTTTGTTAT-------------------------TCTCAAC---------------CATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963807 20 + 189454096 TTTTGTTAT-------------------------TCTCAAC---------------CATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355518 20 - 25927173 TTTTGTTAT-------------------------TCTCAAC---------------TATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385257 20 + 4669795 TTTTGTTAT-------------------------TCTCTAC---------------CATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342927 20 + 135778131 TTTTGTTAT-------------------------TCTCTAC---------------CATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798946 20 - 2847728 TTTTGTTAT-------------------------TCTCTAC---------------CATG i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128415 20 - 14256875 TTTTGTTAT-------------------------TCTCTAT---------------CATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021156 20 - 2196201 TTTTGTTTT-------------------------TCTCTGT---------------CTTG i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11255395 8 - 11315646 TTTTGTTA---------------------------------------------------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86628075 60 - 129401213 ATTTATCATCTGTATCTACATCTATCTGTCTGTCTCTCCATATATGTACAGATCAATATG i mm10.chr8 I 6 C 0 s canFam3.chr16 16978474 20 - 59632846 TTGTGTTCT-------------------------TCTCTAG---------------CATG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1475410 20 - 2520184 GTCCCTTGT-------------------------TCCCTAA---------------AACG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=926498.000000 s hg38.chr4_KI270789v1_alt 140446 124 + 205944 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCG-TAGTTTAGAAT-TTCTAGTTAATAATATTTCAGTT--TCAACTGTCTCCCTTCAGTTT-AATATGGGG-TGTATTTAAAATAAATACAACTCC s panTro5.chr4 192927533 124 + 194502333 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAGTTTAGAAT-TTCTAGTTAATAATATTTCAGTT--TCAACTGTCTCCCTTCAGTTT-AATATGGGG-TGTATTTAAAATAAATACAACTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811187 124 + 195804263 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAGTTTAGAAT-TTCTAGTTAATAATATTTCAGTT--TCAACTGTCTCCCTTCAGTTT-AATATGGGG-TGTATTTAAAATTAATACAACTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848418 124 + 4876863 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAGTTTAGAAT-TTCTAGTTAATAATATTTCAGTT--TCAACTCTCTCCCTTCAGTTT-AATATGGGG-TGTATTTAAAATAAATACAACTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738872 120 + 115148730 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCTAGTTAATAATATTTCAGTT--TCAACTGTCTCCCTTCAGTTT-AACATGGGG-TGTACTTAA----AATACAACTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021049 125 + 190429646 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAGCTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963827 125 + 189454096 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAGCTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355538 125 - 25927173 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAGCTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385277 125 + 4669795 GACCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAGCTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134342947 125 + 135778131 GGCCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAACTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2798966 125 - 2847728 GACCTGCT---CTT--------GCCAATG--TTTCAGCAGATAGCTGCA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCTTTCAGTTTAAATACTGAG-TGTATTTAAAATAAATACAGCTCC i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128435 125 - 14256875 GGCCTGCT---CTT--------GCCAGTG--TTTCAGCAGATAGCTGAA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGACTCCCTCCAGTTCAAATATTGAG-TGTATTTAAAATAAATACAACTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021176 125 - 2196201 GGCCTGCT---CTT--------GCCAGTG--TTTCAGCAGATAGCTGGA-TAATTTAGAAT-TTCCAGTTAATAATATTTCAGTT--TCAACTGTCTCCCTCCAGTTTAAATATTGAG-TGTATTTAAAATAAATAACAAGTC i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11255403 123 - 11315646 --CCTGCT---CTTGCTTATGAGCCAATG--GTCCAGCCAATAGCTGAA-TAATTTAGAATATTTTAGTT-----TCTTCTAGTC--TCAACTGTCTTCCTTGAGTTTAAATATTGCT-TCTGTTGAA----AATACAACTCC i otoGar3.GL873580 C 0 I 822 s mm10.chr8 86628135 117 - 129401213 TACCTATT---CTT--------TGTAATA--AGACACCAGATAGGTGGA-TTATTCAGAAT-TTTCACTGAAATATGACTTTGTT--TTG---GTCTCACCT--GTTTAAGCATTAAACTCTATTTAAACT--ATAGAACC-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16978494 126 - 59632846 TCCATGCTCTGCTT--------ACAAACAACCTTCAGCAGGTGGCTAGATTAATCTAGAAT-TGCCAGTTAACAA---CTGAGTTTCTCAATTGTCTCCCTTCACTTTAGATATTGAA-CCTTTTAAA----AATAGGACTCC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=546373.000000 s hg38.chr4_KI270789v1_alt 140570 72 + 205944 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCCTTT------------------CAGATAA-ATCTTCAATACTCTACTTTTCT s panTro5.chr4 192927657 72 + 194502333 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCCTTT------------------CAGATAA-ATCTTTAATACTCTACTTTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811311 72 + 195804263 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCCTTT------------------CAGATAA-ATCTTTAATACTCTACTTTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848542 72 + 4876863 CTATTAGATGTTAAAGGATTGTTTTCGAACAACTGAGTCCTTT------------------CAGATAA-ATCTTCAATactctacttttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112738992 72 + 115148730 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCTTGT------------------CAGATAA-ATCTTCAATACTCTACTTTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021174 72 + 190429646 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCTTTT------------------CAGATAA-ATCTTCAATATTCTACTTTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187963952 72 + 189454096 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCTTTT------------------CAGATAA-ATCTTCAATATTCTACTTTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355663 72 - 25927173 CTATTAGATATTAAAGGATTGTTTGGGAACAACTGAGTCTTTT------------------CAGATAA-ATCTTCAATATTCTACTTTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385402 72 + 4669795 CTATTAGATATTAAAGGATTGTTTTGGAACAACTGAGTCTTTT------------------CAGATAA-ATCTTCAATATTCTACTTTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343072 72 + 135778131 CTATTAGATACTAAAGGATTGTTCTGGAACAACTGAGTCTTTT------------------GAGATAA-ATCTTCAATATTCTACTTTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799091 72 - 2847728 CTATTAGATATTAAAGGATTATTTTGGAACAACTGAGTCTTTT------------------CAGATAA-ATCTTCAATATTCTACTTTTCT i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128560 71 - 14256875 CTATTATATATGAAAGGATAGTTTTGGAACAACAGAGTCTTTT-------------------AGGTGA-ATCATCAAGATTCTAATTTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021301 71 - 2196201 CTATTAGATATTAAAGGATAGTTTTGGAACAACCGAGTCTTTT-------------------AGGTAA-ATCGTCAAGATTCTGATTTTCT i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11256348 70 - 11315646 CTATTATGTAGTAAATGACTATTTTGGAATAAC--AATCTTTT------------------TACATGA-ATCCTCAATATTTTACTTTTCT i otoGar3.GL873580 I 822 C 0 s mm10.chr8 86628252 69 - 129401213 TTAATA-ATCTTAAATAATTACCTTGGAATACCC--ATTTTAT------------------TGGGGAT-ATATTCAATATTTCACCATTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16978620 90 - 59632846 CTACTAGATTTCAAATGATTGCTTTGG-ATAACTGAGGTTTTTGTTTTGTTTTTGCTTTCTTAGGTAAGATACTTAATAGTTTACTTTTTT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=40148.000000 s hg38.chr4_KI270789v1_alt 140642 8 + 205944 C-TCACTTC s panTro5.chr4 192927729 8 + 194502333 C-TCACTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811383 8 + 195804263 C-TCACTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848614 8 + 4876863 c-tcacttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739064 8 + 115148730 C-TCACTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021246 8 + 190429646 C-TCATTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964024 9 + 189454096 CTTCAtttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355735 8 - 25927173 C-TCATTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385474 8 + 4669795 C-TCAtttc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343144 8 + 135778131 C-TCATTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799163 8 - 2847728 C-TCATttc i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128631 7 - 14256875 C-TCA-TTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021372 7 - 2196201 C-TCA-TTC i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86628321 3 - 129401213 ------GTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16978710 8 - 59632846 C-TCATTTC i canFam3.chr16 C 0 I 2 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256418 0 - 11315646 C a score=40008.000000 s hg38.chr4_KI270789v1_alt 140650 20 + 205944 TCTC-------ACTCTTTtttgtttgt s panTro5.chr4 192927737 20 + 194502333 TCTC-------ACTCTTTtttgtttgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811391 18 + 195804263 TCTC-------ACTCTTTTTTGttt-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848622 18 + 4876863 tctc-------actcttttttgttt-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739072 19 + 115148730 TCTC-------ACTC-TTtttgtttgt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021254 25 + 190429646 TCTCTCttttttttttttttttttt-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964033 12 + 189454096 tctc-------------tctttttt-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355743 19 - 25927173 TCTC------ttttttttttttttt-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385482 14 + 4669795 tctc-----------tctctctttt-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343152 18 + 135778131 TCCC-------TCTCtttttttttt-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799171 16 - 2847728 tctc-------tctc--tctttttt-- i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128638 17 - 14256875 TCTC--------ttttttttttttt-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021379 18 - 2196201 TCTC-------ACTCTCTCtttttt-- i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86628324 18 - 129401213 ACTC-------TCCTTTTCTTCTGT-- i mm10.chr8 C 0 T 186 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978718 2 - 59632846 I e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256418 0 - 11315646 C a score=1021118.000000 s hg38.chr4_KI270789v1_alt 140670 182 + 205944 tttttttttgtttgtttgtttgtttaagacagagtctcactctgtcacccaggctg------gagtgcaatggtgtgaccttggctcactgcaacctccgcttcttgggtttaagtgattctcatgcctcaatctctggagtagctgggattacaggcatgtgtcaccacacctggctaatttttttt s panTro5.chr4 192927757 175 + 194502333 tt-------gtttgtttgtttgtttgagacagagtctcactctgtcacccaggctg------gagtgcaatggcgtgaccttggctcactgcaacctccgcttcttgggtttaagtgattctcgtgcctcaatctctggagtagctgggattacaggcatgtgtcaccacacctggctaatttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811409 172 + 195804263 ---------gtttgtttgtttgtttgagacagagtctcactctgtcacccaggctg------gagtgcaatggcgtgaccttggctcactgcaacctccgcttcttgggtttaagtgattctcgtgcctcaatctctggagtagctgggattacaggcatgtgtcaccacacttggctaa-ttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848640 165 + 4876863 -----------------gtttgtttgagacagagtctcactctgtcacctaggctg------gagtgcaatggtgtgaccttggctcactgcaacctccacttcttgggtttaagtgattctcgtgcctcaatctctggagtagctgggattacaggcatgtgtcaccacacctggctaatttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739091 162 + 115148730 tt-------gtttgtttgtttgtttgagacagagtctcactctgtcacccaggctg------gagtgcaatggtgtgaccttggctcactgcaacctc-------------tgagtgattctcgtgcctcaacctctggagtagctgggattacaggcatgtgtcaccacacctggctaatttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021279 174 + 190429646 --------------tttttttttttgagacagagtctcactttgtcacccaggctggagttagagtgcaatgatgtaaccttggctcactgcaacctctgcttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964045 174 + 189454096 --------------tttttttttttgagacagagtctcactttgtcacccaggctggagttagagtgcaatgatgtgaccttggctcactgcaacctctgcttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355762 174 - 25927173 --------------tttttttttttgagacagagtctcactttgtcacccaggctggagttagagtgcaatgatgtaaccttggctcactgcaacctctgcttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385496 174 + 4669795 --------------tttttttttttgagacagagtctcactttgtcacccaggctggagttggagtgcaatggtgtgaccttggctcactgcaacctctgcttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343170 174 + 135778131 --------------tttttttttttgaaacagagtctcactctgtcacccaggctggagttggagtgcaatggtgtaaccttggctcattgcaacctccacttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799187 174 - 2847728 --------------tttttttttttgagacagagtctcactttgtcacccaggctggagttggagtgcaatggtgtgaccttggctcactgcaacctctgcttcttgggtttaagtgattctcgtgcctcaacctccagagtagctgggattacaggcatgtgccactacacctggctaatatttttt i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128655 171 - 14256875 ---------ttttttttttttttttgagattgcatctcac--tgtcacccaggctg------gagtacactggtgtgaccttggctcactgcaacctctgcctcctggatttaagtgattctcatgcttcagcctcccaagtagctaggattataggcaagtgccaccacatctggctaattattttt i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 1021397 171 - 2196201 ---------ttttttttttttttttgagatagcatctcac--tgtcacccaggctg------gagtacactggtgtgaccttggctcactgcaacctctgcctcctgggtttaagtgattctcatgcctcagcctcccaagtagctaggattataggcatgtgccaccacacctggctaattattttt i cebCap1.NW_016107886v1 C 0 I 84 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978718 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256418 0 - 11315646 C a score=128290.000000 s hg38.chr4_KI270789v1_alt 140852 32 + 205944 ggtagtttttgtagagacACA--------------------------------------------------gcccaccttgg s panTro5.chr4 192927932 32 + 194502333 ggtagtttttgtagagaTACA--------------------------------------------------gcccaccttgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811581 32 + 195804263 ggtagtttttgtagagataca--------------------------------------------------gcccaccttgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848805 32 + 4876863 ggtagtttttgtagagacaca--------------------------------------------------gcccaccttgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739253 32 + 115148730 ggtagtttttatagagacACA--------------------------------------------------gcctgccttgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021453 32 + 190429646 ggtatttttaatagagacatg--------------------------------------------------accaaccttgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964219 32 + 189454096 ggtatttttaatagagacatg--------------------------------------------------acccaccttgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355936 32 - 25927173 ggtatttttaacagagacatg--------------------------------------------------accaaccttgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385670 32 + 4669795 ggtatttttaatagagacatg--------------------------------------------------acccaccttgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343344 32 + 135778131 ggtatttttaatagagacatg--------------------------------------------------gcccgccttgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799361 32 - 2847728 ggtatttttaatagagacatg--------------------------------------------------acccaccttgg i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128828 82 - 14256875 tgtctttttagtagagacaggttttgctatgttgcccagcctggtgtcagacttctgggctgaagtgatctgcccgccttgg i saiBol1.JH378165 I 2 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021568 84 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978718 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256418 0 - 11315646 C a score=302691.000000 s hg38.chr4_KI270789v1_alt 140884 45 + 205944 cctcccaaagtgctgaaattacaggtgtaagccactgcgcccagA s panTro5.chr4 192927964 45 + 194502333 cctcccaaagtgctgaaattacaggtgtaagccactgcacccagc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811613 45 + 195804263 cctcccaaagtgctgaaattacaggtgtaagccactgcacccagc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848837 45 + 4876863 cctcccaaagtgctgaaattacaggtgtaagccaccgcgcccagc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739285 45 + 115148730 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021485 45 + 190429646 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964251 45 + 189454096 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24355968 45 - 25927173 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385702 45 + 4669795 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343376 45 + 135778131 cctcccgaagtgctgaaattacaggtgtgagccaccgtgcccagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799393 45 - 2847728 cctcccaaagtgctgaaattacaggtgtgagccaccgtgcccagc i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128910 45 - 14256875 cctccccaagtgctgaaagtacaggtgtgagccaccacacctggc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021652 45 - 2196201 cctcccaaagtgctgaaattacaggtgtgagccaccacgcctggc i cebCap1.NW_016107886v1 I 84 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978718 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256418 0 - 11315646 C a score=73097.000000 s hg38.chr4_KI270789v1_alt 140929 10 + 205944 CTCACTCTCC s panTro5.chr4 192928009 10 + 194502333 cTCCCTCTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811658 10 + 195804263 cTCACTCTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848882 10 + 4876863 cTCACTCTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739330 10 + 115148730 cTCACTCTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021530 10 + 190429646 cTCACTCTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964296 10 + 189454096 cTCACTCTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356013 10 - 25927173 cTCACTCTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385747 10 + 4669795 cTCACTCTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343421 10 + 135778131 cTCACTCTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799438 10 - 2847728 cTCACTCTCC i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128955 10 - 14256875 cACACTCTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021697 10 - 2196201 cGCACTCTCC i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11256418 10 - 11315646 CTTATTCTTT i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978718 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=206960.000000 s hg38.chr4_KI270789v1_alt 140939 26 + 205944 TTTACTTCTCCAGGTTGGTGGCTGTG s panTro5.chr4 192928019 26 + 194502333 TTTACTTCTCCAGGTTGGTGGCTGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811668 26 + 195804263 TTTACTTCTCCAGGTTGGTGGCTGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848892 26 + 4876863 TTTACTTCTCCAGGTTGGTGGCTGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739340 26 + 115148730 TTTACTTCTCCAGGTTGGTGGCTGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021540 26 + 190429646 TTTACTTCTCCAGATTGGTGGCTGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964306 26 + 189454096 TTTACTTCTCCAGATTGGTGGCTGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356023 26 - 25927173 TTTACTTCTCCAGATTGGTGGCTGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385757 26 + 4669795 TTTACTTCTCCAGGTTGGTGGCTGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343431 26 + 135778131 TTTACTTCTCCAGATTGGTGGCTGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799448 26 - 2847728 TTTACTTCTCCAGGTTGGTGGCTGTG i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128965 26 - 14256875 TTTACTTCTCCATGTTGGTGGCTGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021707 26 - 2196201 TTTACTTCTCCATGTTGGTGGCTGTG i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11256428 26 - 11315646 TTTCCTTCCCTAAGATCATGGCCATG i otoGar3.GL873580 C 0 I 19 s canFam3.chr16 16978720 25 - 59632846 TTTACTGCCCCTGAG-GGTATCTGTG i canFam3.chr16 I 2 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=84203.000000 s hg38.chr4_KI270789v1_alt 140965 11 + 205944 TCTATGAGGAG s panTro5.chr4 192928045 11 + 194502333 TCTATGAGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811694 11 + 195804263 TCTATGAGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848918 11 + 4876863 TCTATGAGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739366 11 + 115148730 CCTATGAGGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021566 11 + 190429646 TCTATGAGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964332 11 + 189454096 TCTATGAGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356049 11 - 25927173 TCTATGAGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385783 11 + 4669795 TCTATGAGGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343457 11 + 135778131 TCTATGAGGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799474 11 - 2847728 TCTATGAGGAG i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13128991 11 - 14256875 CCTCTGAGGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1021733 11 - 2196201 TCTCTGAGGAA i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16978745 11 - 59632846 TCTATGAGGAG i canFam3.chr16 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256454 19 - 11315646 I a score=511610.000000 s hg38.chr4_KI270789v1_alt 140976 71 + 205944 TACCCTTTCTATGTCT---GC---AGGAGGAGAGTGGGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA s panTro5.chr4 192928056 71 + 194502333 TACCCTTTCTATGTCT---GC---AGGAGGAGAGTGGGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811705 71 + 195804263 TACCCTTTCTATGTCT---GC---AGGAGGAGAGTGGGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3848929 71 + 4876863 TACCCTTTCTATGTCT---GC---AGGAGGAGAGTGGGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739377 74 + 115148730 AACCCTTTCTATGTCTGCAGC---AGGAGGAGAGTGGGTCCTTGCATCCACACAGCGGCCT---------------GGAGTGTCACTCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021577 74 + 190429646 GACCCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964343 74 + 189454096 GACTCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356060 74 - 25927173 GACCCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGCATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3385794 74 + 4669795 GACCCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGTATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343468 74 + 135778131 GACCCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGCATCCGCACAGCAGCCT---------------GGAGTGTCACTCTGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799485 74 - 2847728 GACCCTTTCTATGTCT---GCAATAGGAGGAGAGTGAGTCCTTGTATCCACACAGCAGCCT---------------GGAGTGTCACTCTGGA i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13129002 74 - 14256875 AACCCTTTCTATGTCC---ACAGAAGGAGGAGTGTGGGTCCTTGCATCAACACAGCATCCT---------------GCAGTGTCACTCTGGA i saiBol1.JH378165 C 0 I 2587 s cebCap1.NW_016107886v1 1021744 74 - 2196201 GACCCTTTCTATGTCC---GCAGAAGGAGGAATGTGGGTCCTTGCATCCATACAGCATCCT---------------GGACTGTCACTGTGGA i cebCap1.NW_016107886v1 C 0 I 1594 s otoGar3.GL873580 11256473 69 - 11315646 TCCTCTTCCTCTCTCT---GTATCA-----AGAGCATGTTCCTGGGTACACACAGTATCCT---------------GGGATGTCACTGTGGA i otoGar3.GL873580 I 19 I 6316 s canFam3.chr16 16978756 84 - 59632846 AACC----CTATGTCT---GCGGCAAGAAATGAGTG-GTCCTGGGATACACACAGCAATTTTGTTGGTGTGTTGGGGGGGTGTTTCTCTGGA i canFam3.chr16 C 0 I 353 e calJac3.chr3 189641321 932 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I a score=867886.000000 s hg38.chr4_KI270789v1_alt 141047 176 + 205944 CACtctcttgcctcagcctcctgagaagctgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgttggccaggatggtcttgatctcttgacctcgtgatctgcctgccttggcctcccaaagtgctgggattacaggcg s panTro5.chr4 192928127 176 + 194502333 CACtctcctgcctcagcctcccgagaagctgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgttggccaggatggtcttgatctcttgacctcgtgatctgcctgcctcggcctcccaaagtgctgggattacaggcg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811776 176 + 195804263 CACtctcctgcctcagcctcccgagaagctgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgttggccaggatggtcttgatctcttgacctcgtgatctgcctgcctcggcctcccaaagtgctgggattacaggcg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849000 176 + 4876863 CAAtctcctgcctcagcctcccgagtagctgggactacaggcatgtgccaccacacccagataatttttgtatttttagtagagacggggtttcactatgttggccaggatggtcttgatctcttgacctcgtgatctgcctgccttggcctcccaaagtgctgggattacaggcg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739451 176 + 115148730 cactctcctgcctcagcctctggagtagctgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgttggccaggatggtcttgatctcttgacctcgtgatctgcctgcctcggcctcccaaagtgttgggattacaggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189021651 176 + 190429646 CACtctcctgcctcagcctccgaagtaactgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcactgcgttggccaggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaggtgctgggattacaggcg i rheMac8.chr5 C 0 I 308 s macFas5.chr5 187964417 176 + 189454096 CACtctcctgcctcagcctccgaagtaactgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcactgcattggccaggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaggtgctgggattacaggcg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356134 176 - 25927173 CACtctcctgcctcagcctccgaagtaactgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcactgcgttggccaggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaggtgctgggattacaggcg i macNem1.NW_012013133v1 C 0 I 309 s cerAty1.NW_012001672v1 3385868 176 + 4669795 CACtctcctgcctcagcctcccaagtaactgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcactgtgttggccaggatggtctcgatctcctgacctcgtaatctgcctgcctcggcctcccaaggtgctgggattacaggcg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134343542 176 + 135778131 CACtctcctgcctcagcctcccgagtaactgggactacaggcatgtgccaccacacccaactaatttttgtatttttagtagagatggggtttcactacgttggccaggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaggtgctaggattacaggtg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2799559 176 - 2847728 CACtctcctgcctcagcctcccaagtaactgggactacaggcatgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcactgtgttggccaggatggtctcgatctcctgacctcgtgatctgcctgcctcggcctcccaaggtgctgggattacaggcg i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256542 6316 - 11315646 I a score=26400.000000 s hg38.chr4_KI270789v1_alt 141223 6 + 205944 tgag-cc s panTro5.chr4 192928303 6 + 194502333 tgag-cc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811952 6 + 195804263 tgag-cc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849176 6 + 4876863 tgag-cc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739627 6 + 115148730 tgag-cc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022135 6 + 190429646 tgag-cc i rheMac8.chr5 I 308 C 0 s macFas5.chr5 187964593 7 + 189454096 tgagccc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356619 6 - 25927173 tgag-cc i macNem1.NW_012013133v1 I 309 C 0 s cerAty1.NW_012001672v1 3386044 6 + 4669795 tgag-cc i cerAty1.NW_012001672v1 C 0 I 327 s chlSab2.chr7 134343718 6 + 135778131 tgag-ct i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2799735 6 - 2847728 tgag-cc i manLeu1.NW_012102221v1 C 0 M 2630 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e otoGar3.GL873580 11256542 6316 - 11315646 I a score=40499.000000 s hg38.chr4_KI270789v1_alt 141229 24 + 205944 actgtgcctggctgatagtttctt s panTro5.chr4 192928309 24 + 194502333 actgtgcctggccgatagtttctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811958 24 + 195804263 actgtgcctggccgatagtttctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849182 24 + 4876863 actgtgcctggccgatagtttctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739633 24 + 115148730 accgtgcctggACgatagtttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022141 12 + 190429646 accgcgcctggc------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187964600 24 + 189454096 accacacccagccGATAGtttctt i macFas5.chr5 C 0 I 298 s macNem1.NW_012013133v1 24356625 12 - 25927173 accgcgcctggc------------ i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134343725 24 + 135778131 accgcacccagccgatagtttctt i chlSab2.chr7 I 1 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3386050 327 + 4669795 I e otoGar3.GL873580 11256542 6316 - 11315646 I a score=14280.000000 s hg38.chr4_KI270789v1_alt 141253 17 + 205944 atactgtgaagaagctc s panTro5.chr4 192928333 17 + 194502333 atactgtgaagaagctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811982 17 + 195804263 atactgtgaagaagctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849206 17 + 4876863 atactgtgaagaagctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739657 17 + 115148730 atactgtgaagaagctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022153 1 + 190429646 -------------G--- i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24356637 1 - 25927173 -------------G--- i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134343749 17 + 135778131 ataccgtgaagaagctc i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3386050 327 + 4669795 I e macFas5.chr5 187964624 298 + 189454096 I e otoGar3.GL873580 11256542 6316 - 11315646 I a score=7377.000000 s hg38.chr4_KI270789v1_alt 141270 3 + 205944 ttt s panTro5.chr4 192928350 3 + 194502333 ttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192811999 3 + 195804263 ttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849223 3 + 4876863 ttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739674 3 + 115148730 ttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022154 2 + 190429646 -tt i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187964922 2 + 189454096 -tt i macFas5.chr5 I 298 I 1 s macNem1.NW_012013133v1 24356638 2 - 25927173 -tt i macNem1.NW_012013133v1 C 0 I 1 s chlSab2.chr7 134343766 3 + 135778131 ttt i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3386050 327 + 4669795 I e otoGar3.GL873580 11256542 6316 - 11315646 I a score=2096219.000000 s hg38.chr4_KI270789v1_alt 141273 544 + 205944 agttcaattagatcccatttgttaatttgtgctttgttgcaattgctttttgtgtttttgttatgaaatctttgccacttcctatgtccagaatggtatttcctaggttattttccagggtttttatagttttgggttttatatttaaggcgttaatccattttgagttgatttttgtgtatgctgtaaagaaggaatccagtttcagtcttctacatgtggctagccagttatcctagcaccatttattgaaataagaagtcttttctccattgcttgtttctgtcatatttgtcaaaggtcagatgatttagatgtctggtcttatttctggattatctatttggttctgttggtctatgtgtctgtttttgtaccagtatcatgctgttttagttactgtagccttgtagtatagtttgaagtccagtaatgtgatgcctccagctttgttatttttgcttaggattgccttggctatttgggctctttttaaattgtgtagttaagtaatgttaagcatattcacctgaataatcttgcc s panTro5.chr4 192928353 544 + 194502333 agttcaattagatcccatttgttaatttgtgctttgttgcaattgctttttgtgtttttgttatgaaatctttgccacttcctatgtccagagtggtatttcctaggttattttccagggtttttatagttttgggttttatgtttaaggcattaatccattttgagttgatttttgtgtatgctgtaaagaaggaatccagtttcagtcttctacatatggctagccagttatcctagcacgatttattgaaataagaagtcttttctccattgcttgtttctgtcatatttgtcaaaggtcagatgatttagatgtctggtcttatttctggattatctatttggttctgttggtctatgtgtctgtttttgtaccagtatcatgctgttttagttactgtagccttgtagtatagtttgaagtccggtaatatgatgcctccagctttgttacttttgcttaggattgccttggctatttgggctctttttaaattgtgtagttaagtaatgttaagcatagtcacctgaataatcttgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812002 544 + 195804263 agttcaattagatcccatttgttaatttgtgctttgttgcaattgctttttgtgtttttgttatgaaatctttgccacttcctatgtccagagtggtatttcctaggttattttccagggtttttatagttttgggttttatgtttaaggcattaatccattttgagttgatttttgtgtatgctgtaaagaaggaatccagtttcagtcttctacatatggctagccagttatcctagcacgatttattgaaataagaagtcttttctccattgcttgtttctgtcatatttgtcaaaggtcagatgatttagatgtctggtcttatttctggattatctatttggttctgttggtctatgtgtctgtttttgtaccagtatcatgctgttttagttactgtagccttgtagtatagtttgaagtccggtaatatgatgcctccagctttgttacttttgcttaggattgccttggctatttgggctctttttaaattgtgtagttaagtaatgttaagcatagtcacctgaataatcttgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849226 544 + 4876863 agtttaattagatcccatttgttaatttgtgctttgttgcaattgctttttgtgtttttgtcatgaaatctttgccacttcctatgtccagaatggtatttcctaggttattttccagggtttttatagttttgggttttatatttaaggcgttaatccattttgagttgattgttgtgtgtgctgtaaagaaggaatccagtttcagtcttctacatatggctagccagttatcctagcaccatttattgaaataagaagtcttttctccattgcttgtttctgtcatacttgtcaaagatcagatgatttagatgtctggtcttatttctggattatctatttggttctgttggtctatgtgtctgtttttgtaccagtatcatgctgttttagttactgtagccttgtagtatagtttgaagtccggtaatgtgatgcctccagctttgttatttttgcttaggattgccttggctatttgggttctttttaaattgtgtagttaagtaatgttaagcatattcacgtgaataatcttgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112739677 540 + 115148730 agtttaattagatcccatttgttaatttgtgctttgttgcaattgcttttggtgtttttgtcatgaaatctttgcgacttcctatgtccagaatggtatttcctaggttattttccagggtttttatagttttgggttttatatttaaggcattaatccattttgagttgatttttgtgtatgctgtaaagaaggaatccagtttcagtcttctacatatggctagccagttatcccagcaccatttattg----aataagtcttttccccattgcttgtttctgtcatatttgtcaaaggtcagatgatttagatgtctggtcttatttctggattatctatttggttctattggtctatgtgtctgtttttgtaccagtatcatgctgttttagttactgtagccttgtagtatagtttgaagtctggtaatgtgatgcctccagctttgttatttttgcttaggattgccttggctatttgggctctttttaaagtgtgtagttcagtaatgttaagtatattcacatgaataatcttgcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022157 541 + 190429646 agtttaattacatcccatttgttaatttgtgctttgttgcaattgcttttggtgtctttgtcatgaaatctttgccacttcctatgttcagaataatatttcctaggttatttcccagggtttttatagttttgggttttatatttaagactttaatacattttgagttgatttttgtgtatgctgtacagaaggaatccagtttcag--ttctgcatatggctagccagtcatcccagcactatttattg-aataagagttctttcccccattgcttgtttttgtcatatttgtcaaaggtcagatgatttaggtgtctggtcttatttctggattatctatttggttctattggtctatgtgtctgtttttgtaccagtattgtgctgttttagttactgtagccttgtagtatagtttaaagtctggtaatgtgatgcctccagctttgtcatttttgcttaggattgccttggctatttgagctctttttaaagtgtgtagttcagtaatgttaagtatattcatgtgaataatcttgcc i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187964925 541 + 189454096 agtttaattacatcccatttgttaatttgtgctttgttgcaattgcttttggtgtctttgtcatgaaatctttgccacttcctatgttcagaataatatttcctaggttatttcccagggtttttatagttttgggttttatatttaagacttcaatacattttgagttgatttttgtgtatgctgtacagaaggaatccagtttcag--ttctgcatatggctagccagtcatcccagcactatttattg-aataagagttctttcccccattgcttgtttttgtcatatttgtcaaaggtcagatgatttaggtgtctggtcttatttctggattatctatttcgttctattggtctatgtgtctgtttttgtaccagtattgtgctgttttagttactgtagccttgtagtatagtttaaagtctggtaatgtgatgcctccagctttgtcatttttgcttaggattgccttggctatttgagctctttttaaagtgtgtagttcagtaatgttaagtatattcatgtgaataatcttgcc i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24356641 541 - 25927173 agtttaattacatcccatttgttaatttgtgctttgttgcaattgcttttggtgtctttgtcatgaaatctttgccacttcctatgttcagaataatatttcctaggttatttcccagggtttttatagttttgggttttacatttaagactttaatacattttgagttgatttttgtgtatgctgtacagaaggaatccagtttcag--ttctgcatatggctagccagtcatcccagcactatttattg-aataagagttctttcccccattgcttgtttttgtcatatttgtcaaaggtcagatgatttaggtgtctggtcttatttctggattatctatttggttctattggtctatgtgtctgtttttgtaccagtattgtgctgttttagttactgtagccttgtagtatagtttaaagtctggtaatgtgatgcctccagctttgtcatttttgcttaggattgccttggctatttgagctctttttaaagtgtgtagttcagtaatgttaagtatattcatgtgaataatcttgcc i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3386377 541 + 4669795 agtttaattacatcccatttgttaatttgtgctttgttgcaattgcttttggtgtctttgtcatgaaatctttgccatttcctatgttcagaataatatttcctaggttatttcccagggtttttatagttttgggttttatatttaagactttaatacattttgagttgatttttgtgtatgctgtacagaaggaatccagtttcag--ttctgcatatggctagccagtcatcccagcactatttattg-aataagagttctttcctccattgcttgtttttgtcatatttgtcaaaggtcagatgatttaggtgtctggtcttatttctggattatctatttggttctattggtctatgtgtctgtttttgtaccagtattgtgctgttttagttactgtagccttgtagtatagtttaaagtctggtaatgtgatgcctccagctttgtcatttttgcttaggattgccttggctgtttgagctctttttaaagtgtgtagttcagtaatgttaagtatattcatgtgaataatcttgcc i cerAty1.NW_012001672v1 I 327 C 0 s chlSab2.chr7 134343769 543 + 135778131 agtttaattagatcccatttgttaatttgtgctttgttgcaattgcttttggtgtctttgtcatgaaatctttgccacttcctatgttcagaatgatatttcctaggttatttcccagggtttttatagttttgggttttatatttaagactttaatacattttgagttgatttttatgtatgctgtacagaaggaatccagtttcagtcttctgcatacggctagccagtcatcccggtaccatttattg-aataagagttctttcccccattgcctgtttctgtcatatttgtcaaaggtcagatgatttaggtgtctggtcttatttctggattatctatttggttctattggtctatgtgtctgtttttgtaccagtattgtgctgttttagttactgtagccttgtagtatagtttgaagtctggtaatgtgatgcctccaactttgtcatttttgcttaggattgccttggatatgtgagctctttttaaagtgtgtagttcagtaatgttaagtatattcacgtgaataatcttgcc i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e otoGar3.GL873580 11256542 6316 - 11315646 I a score=53905.000000 s hg38.chr4_KI270789v1_alt 141817 11 + 205944 aaagtaaaact s panTro5.chr4 192928897 11 + 194502333 aaagtaaaact i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812546 11 + 195804263 aaagtaaaact i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849770 11 + 4876863 aaagtaaaact i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740217 11 + 115148730 aaagtaaaact i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022698 11 + 190429646 aaagtaaaact i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965466 11 + 189454096 aaagtaaaact i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357182 11 - 25927173 aaagtaaaact i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3386918 11 + 4669795 aaagtaaaact i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344312 11 + 135778131 aaagtaaaact i chlSab2.chr7 C 0 C 0 s otoGar3.GL873580 11262858 11 - 11315646 AAAGAAAAACT i otoGar3.GL873580 I 6316 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16978840 353 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=876476.000000 s hg38.chr4_KI270789v1_alt 141828 197 + 205944 t-ataatcattgaacaacaattcccacttttcaactctcccc-aaccctggt-aaccactattct-atcttgtgtttcaataaattttgctactttaaataccttgtaaaagtggaatcatacagtatttgcctttttgtaagtgacttatttcatttagcccagagtcttcgaggttcatttatgttatagcatgtgaaa s panTro5.chr4 192928908 198 + 194502333 ttataatcattgaacaacaattcccacttttcaactctcccc-aaccctggt-aaccactattct-atcttgtgtttcaataaattttgctactttaaataccttgtataagtggaatcatacagtatttgcctttttgtaagtgacttatttcatttagcccagagtcttcgaggttcatttatgttatagcatgtgaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812557 198 + 195804263 ttataatcattgaacaacaattcccacttttcaactctcccc-aaccctggt-aaccactattct-atcttgtgtttcaataaattttgctactttaaataccttgtataagtggaatcatacagtatttgcctttttgtaagtgacttatttcatttagcccagagtcttcgaggttcatttatgttatagcatgtgaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849781 196 + 4876863 ttataatcattgaacaacaattcccacttttcaactctcccc-aaccctggt-aaccactattct-atcttgtgtttcaataaattttgctactttaaataccttgtataagtggaatcatacagtatttgcctttttgtaagtgac--atttcatttagcacagagtcttcgaggttcatttatgttatagcatgtgaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740228 196 + 115148730 ttataatcattgaacaacaactcccacttttcaactctcccc-aaccccagt-aaccactattct-atcttgtgtttcaataaattttgctactttaaataccttgtataagtggaatcatacagtatttgcctttttgtaagtgacttatttcatttagcac--agtcttcgaggttcatttatgtcatagcatgtgaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022709 199 + 190429646 ttatagtcattgaacaacaattcccacttttcaactttccccaaaccctggt-aaccactattct-accttgtgtttcaataaattttgctactttaaataccttatataagtggaatcatatagtatttgcctttttgtaagtgacttatttcatttagcacagagtcctcaaggttcatttatgttatagcatgtgaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965477 199 + 189454096 ttatagtcattgaacaacaattcccacttttcaactttccccaaaccctggt-aaccactattct-accttgtgtttcaataaattttgctactttaaataccttatataagtggaatcatatagtatttgcctttttgtaagtgacttatttcatttagcacagagtcctcaaggttcatttatgttatagcatgtgaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357193 199 - 25927173 ttatagtcattgaacaacaattcccacttttcaactttccccaaaccctggt-aaccactattct-accttgtgtttcaataaattttgctactttaaataccttatataagtggaatcatatagtatttgcctttttgtaagtgacttatttcatttagcacagagtcctcaaggttcatttatgttatagcatgtgaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3386929 199 + 4669795 ttatagtcattgaacaacaattcccacttttcaactttccccaaaccctggt-aaccactattct-accttgtgtttcaataaattttgctactttaaataccttatataagtggaatcatatagtatttgcctttttgtaagtgacttatttcatttagcacagagtcctcaaggttcatttatgttatagcatgtgaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344323 199 + 135778131 ttatagtcattgaacaacaattcccacttttcaactttccccaaaccctggt-aaccactattct-aacttgtgtttcaattaattttgctactttgaataccttatataagtggaatcatatggtatttgcctttttgtaagtgacttatttcatttagcacagagtcttcgaggttcatttatgttatagcatatgaaa i chlSab2.chr7 C 0 C 0 s otoGar3.GL873580 11262869 140 - 11315646 C-------------AAAGAattctcccttt---------cccacatgctggt-atccaccatt-----cttctgtttcta-aaattgtactgctttagaaactgcttataagtggaaatgtactgtatttatcttttcattgttgac--attttatttagcacagggtctt------------------------------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979193 198 - 59632846 -tatactcattaaacaacaattccccttttcctccctgacctccagcctggtaaactgccattctaatttcttgtttcta-gtattagactattttagatatcttgtataagtgg-atcatacagtatttgtgtctttttgaatggcttaatttacttagcataatgccttcaaggttcatttatgttgtggcatataaca i canFam3.chr16 I 353 C 0 e calJac3.chr3 189641321 932 - 190850796 I e cebCap1.NW_016107886v1 1021818 1594 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e mm10.chr8 86628342 186 - 129401213 T e aotNan1.NW_018492112v1 3415192 1157 - 5030052 I e saiBol1.JH378165 13129076 2587 - 14256875 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=1677357.000000 s hg38.chr4_KI270789v1_alt 142025 211 + 205944 taatttcct-----------------------------------------------------------ttgttttt--aaggtagaataatatcacactgtgtgcctatac------cacattttgtttatccactcatctgctgatgaacgtttaggttgcttccaccttttggctgttgtgaatagtacagctatgaacgtaggtgtg-aa---agacctc---aagatgctgttttta-----------attcttttgggtatatactcagaagtgagattgctagatcatat s panTro5.chr4 192929106 211 + 194502333 taatttcct-----------------------------------------------------------ttgttttt--aaggtagaataatatcacactgtgtgcctatac------cacattttgtttatccactcatctgctgatgaacgtttaggttgcttccaccttttggctgttgtgaatagtacagctatgaacgtaggtgtg-aa---agacctc---aagatgctgttttta-----------attcttttgggtatatactcagaagtgagattgctagatcatat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812755 211 + 195804263 taatttcct-----------------------------------------------------------ttgttttt--aaggtagaataataacacactgtgtgcctatac------cacattttgtttatccactcatctgctgatgaacgtttaggttgcttccaccttttggctgttgtgaatagtacagctatgaacgtaggtgtg-aa---agacctc---aagatgctgttttta-----------attcttttgggtatatactcagaagtgagattgctagatcatat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3849977 270 + 4876863 taatttcctttgtttttaaggtagaataatatcacactgtgtgcctataccacattttgtttatccacttgttttt--aaggtagaataatatcacactgtgtgcctatac------cacattttgtttatccactcatctgctgatgaacgtttaggttgcttccaccttttggctgttgtgaatagtacagctatgaacgtaggggtg-aa---agacctc---aagatgctgttttta-----------attcttttgggtatatactcagaagtgagattgctagatcatat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740424 211 + 115148730 taatttcct-----------------------------------------------------------tcgttttt--aaggttgcatagtatcacactgtgtgcctatac------cacattttgtttatcaatgcatctgctgatgaacatttaggttgcttccacctttcggctgttgtgaatagtacagctatgaatgtaggtgtg-aa---agacctc---aggaccctgttttta-----------attcttttgggtatatattcagaagtgagattgctagatcatat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189022908 209 + 190429646 taatttact-----------------------------------------------------------tcgttttt--gatgttgaataatatcacactgtgtgcctttat------cacattttgtttatctactcatctgctgatgaacgttcaggttgcttctaccttttggctgttgtgaatagtacagctatgaacataggtgtg-aa---atacctc---aagaccctgttttta-----------attgttttgggcatatattcaggagtgagattgctagatc--at i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965676 209 + 189454096 taatttact-----------------------------------------------------------tcgctttt--gatgttgaataatatcacactgtgtgcctttat------cacattttgtttatctactcatctgctgatgaacgttcaggttgcttctaccttttggctgttgtgaatagtacagctatgaacataggtgtg-aa---atacctc---aagaccctgttttta-----------attgttttgggcatatattcaggagtgagattgctagatc--at i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357392 209 - 25927173 taatttact-----------------------------------------------------------tcgttttt--gatgttgaataatatcacactgtgtgcctttat------cacattttgtttatctactcatctgctgatgaacgttcaggttgcttctaccttttggctgttgtgaatagtacagctatgaacataggtgtg-aa---atacctc---aagaccctgttttta-----------attgttttgggcatatattcaggagtgagattgctagatc--at i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387128 209 + 4669795 taatttcct-----------------------------------------------------------tcgttttt--gatgttgaataatatcacactgtgtgcctttat------cacattttgtttatctactcatctgctgatgaacgttcaggttgcttctaccttttggctgttgtgaatagtacagctatgaacataggtgtg-aa---atacctc---aagaccctgttttta-----------attgttttgggcatatattcaggagtgagattgctagatc--at i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344522 209 + 135778131 taatttcct-----------------------------------------------------------tcgttttt--aatgttgaataatatcacactgtgtgcctttat------cacattttgtttatccactcatctgctgatgaacgttcaggttgcttctaccttttggttgttgtgaatagtacagctatgaacataggtgtg-aa---atacctc---aagaccctgttttta-----------attgttttgggcatatattcaggagtgagattgctagatc--at i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642253 209 - 190850796 taatttcct-----------------------------------------------------------tcattttc--aaggttgaataagatcacactgtgagtctgtac------cacattttgttcatccacccatctgctggc-agcatgcaggttgcttccaccttttggctgttgtgaatagcacagctgtgaatataggtgtg-aa---atacctc---gagatcct-ttttta-----------attcttttggatatatattcagcagtgagattgctagatcatat i calJac3.chr3 I 932 C 0 s saiBol1.JH378165 13131663 211 - 14256875 taatttcct-----------------------------------------------------------tcattttt--aaggttgaataatattacactgtgagtctatac------aacattttgtttatccactcatgtgctgacaaacattcaggttgcttccaccttttggctgttatgaatagtatagctatgaatataggtgtg-aa---atacctc---gagatcctgttttta-----------attcttttggatatatattcagaagtcagattgctagatcacat i saiBol1.JH378165 I 2587 C 0 s cebCap1.NW_016107886v1 1023412 211 - 2196201 taatttcct-----------------------------------------------------------tcattttt--aaggttgaataatattacactgtgagtctatac------aacattttgtttatccactcatgtactgacaaacattcaggttgcttccaccttttggctgttgtgaatagtacagctatgaataaaggtgtg-aa---acacctc---gagatcctgttttta-----------attcttttggatacgtatccagaagtgagattgctagatcatat i cebCap1.NW_016107886v1 I 1594 C 0 s aotNan1.NW_018492112v1 3416349 211 - 5030052 taattttct-----------------------------------------------------------tcattttt--aaggttgaataatatcacactgtgagtctatac------cacattttgtttatccactcatctgctgacaaacattcaggttgcttccaccttttggctgttgtgaatagtacagctgtgaatataggtatg-aa---atacctc---gagatcctgttttta-----------attcttttggatatatattcagcagtgagattgctagatcatat i aotNan1.NW_018492112v1 I 1157 C 0 s otoGar3.GL873580 11263009 205 - 11315646 --attttct-----------------------------------------------------------tc-ctctt--aaggcttaatcatattacattgtgtgtacatatgtacagcacattttgtttattcactcatctgttggtgggtat--acgttgcttcc-ccttccacctattgtgaatagcatgtctatgaacatggatgtg-aagatatac------------ctgctttcc-----------ttcctttcaaatttattttcagtagtgggtttgttggatcatgt i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979391 227 - 59632846 -ggcttcct-----------------------------------------------------------ttcttttttggaggctgaacaatattctgctgtatgtacatac------tacatgtttaaaatccatttatctgctaatagacacttaggttgattgcatctcttgtttattgtaaagattgctacaatgaatgtgggcatgcaa---atatctcttaaagagcctgttttcaatttttgttttatttttttggataaatacccagaagtggcattgctggatcatat i canFam3.chr16 C 0 I 2 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e mm10.chr8 86628342 186 - 129401213 T e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=36169.000000 s hg38.chr4_KI270789v1_alt 142236 4 + 205944 attc s panTro5.chr4 192929317 4 + 194502333 attc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812966 4 + 195804263 attc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850247 4 + 4876863 attc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740635 4 + 115148730 attc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023117 4 + 190429646 atTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965885 4 + 189454096 atTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357601 4 - 25927173 atTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387337 4 + 4669795 atTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344731 4 + 135778131 atTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642462 4 - 190850796 attc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131874 4 - 14256875 attc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023623 4 - 2196201 attc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416560 4 - 5030052 ATTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11263214 4 - 11315646 atta i otoGar3.GL873580 C 0 T 7814 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16979618 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=63372.000000 s hg38.chr4_KI270789v1_alt 142240 14 + 205944 aattttttgaaaaa s panTro5.chr4 192929321 14 + 194502333 aattttttgaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812970 14 + 195804263 aattttttgaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850251 14 + 4876863 aattttttgaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740639 14 + 115148730 acttttttgaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023121 13 + 190429646 AATTTTTCG-AAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965889 13 + 189454096 AATTTTTCG-AAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357605 13 - 25927173 AATTTTTCG-AAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387341 13 + 4669795 AATTTTTCG-AAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344735 13 + 135778131 AGTTTTTCA-AAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642466 13 - 190850796 aacttttaa-AAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131878 13 - 14256875 aacttttga-aaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023627 13 - 2196201 aacttttga-aaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416564 13 - 5030052 AACTTTTGA-AAAA i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16979618 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e otoGar3.GL873580 11263218 7814 - 11315646 T a score=116771.000000 s hg38.chr4_KI270789v1_alt 142254 14 + 205944 ccactataGCTTTT s panTro5.chr4 192929335 14 + 194502333 ccactataGCTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812984 14 + 195804263 ccactataGCTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850265 14 + 4876863 ccactataGCTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740653 14 + 115148730 ccACTGTAGCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023134 14 + 190429646 CCACTATAGCTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965902 14 + 189454096 CCACTATAGCTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357618 14 - 25927173 CCACTATAGCTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387354 14 + 4669795 CCACTATAGCTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344748 14 + 135778131 CCACTATGGCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642479 14 - 190850796 CCACTATAGCTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131891 14 - 14256875 ccactatagctttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023640 14 - 2196201 ccactatagctttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416577 14 - 5030052 CCAGTATAGATTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11255404 14 - 11315646 CTGCTCTTGCTTAT i otoGar3.GL873580 T 7814 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475430 0 - 2520184 C e canFam3.chr16 16979618 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=106526.000000 s hg38.chr4_KI270789v1_alt 142268 12 + 205944 GAGCCAATGTTT s panTro5.chr4 192929349 12 + 194502333 GAGCCAATGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192812998 12 + 195804263 GAGCCAATGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850279 12 + 4876863 GAGCCAGTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740667 12 + 115148730 GAGCCAATGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023148 12 + 190429646 GAGCCAATGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965916 12 + 189454096 GAGCCAATGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357632 12 - 25927173 GAGCCAATGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387368 12 + 4669795 GAGCCAATGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344762 12 + 135778131 GAGCCAATGCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642493 12 - 190850796 GAGTCAGTGTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131905 12 - 14256875 gagtcaatgttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023654 12 - 2196201 cagtcaatgttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416591 12 - 5030052 GAGTCAATGTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11255418 12 - 11315646 GAGCCAATGGTC i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1475430 12 - 2520184 GGGCCAACACGT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e canFam3.chr16 16979618 2 - 59632846 I e mm10.chr8 86628342 186 - 129401213 T e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=428760.000000 s hg38.chr4_KI270789v1_alt 142280 50 + 205944 CAACAGATAGCTGAATAAGTTAGAATTTACAGTGAACAATA-TTACAGTTT s panTro5.chr4 192929361 50 + 194502333 CAACAGATGGCTGAATAAGTTAGAATTTACAGTGAACAATA-TTACAGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813010 50 + 195804263 CAACAGATGGCTGAATAAGTTAGAATTTACAGTGAACAATA-TTACAGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850291 50 + 4876863 CAACAGATAGCTGAATAATTTGGAATTTTCAGTGAACAATA-TTACAGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740679 50 + 115148730 AAACAGATAGCTGAATAATTTAGAATTTTCAGTGAACAATA-TTACAGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023160 50 + 190429646 CAACAGATAGCTGAATAATTTAGAATTTTCAATGAACAATA-TTACAGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965928 50 + 189454096 CAACAGATAGCTGAATAATTTAGAATTTTCAATGAACAATA-TTACAGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357644 50 - 25927173 CAACAGATAGCTGAATAATTTAGAATTTTCAATGAACAATA-TTACAGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387380 50 + 4669795 CAACAGATAGCTGAATAATTTAGAATTTTCAATGAACAATA-TTACAGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344774 50 + 135778131 CAACAGATAGCTGAATAATTTAGAATGTTCAATGAACAATA-TTACAGTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642505 50 - 190850796 CAACAGATAACTGAATAATTTAGAATTTTAAATGAACAATA-TTACAGTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131917 51 - 14256875 caacAGATAGCTGAATAATTTAGAATTTTCAATTAACAATATTTACAGTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023666 50 - 2196201 caacagatagctgaataatttagaactttcaattaacaata-gtaccgttt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416603 50 - 5030052 CAACAGATAGCTGAATAATTCAGAATTTTCAATTAACAATA-TTACAGTTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11255430 36 - 11315646 CAGCCAATAGCTGAATAATTTAG--------------AATA-TTTTAGTTT i otoGar3.GL873580 C 0 I 7752 s mm10.chr8 86628156 46 - 129401213 CACCAGATAGGTGGATTATTCAGAATTTTCACTGA--AATA-TGACTTT-- i mm10.chr8 T 186 C 0 s dasNov3.JH570353 1475442 50 - 2520184 TAGCAGAGAGCTGGGTATTCTGGAATAGTCAGCTAACCGTA-CTTCCGTTC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e canFam3.chr16 16979618 2 - 59632846 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=106795.000000 s hg38.chr4_KI270789v1_alt 142330 14 + 205944 C-TTCCAGGTTCAAC s panTro5.chr4 192929411 14 + 194502333 C-TTCCAGTTTCAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813060 14 + 195804263 C-TTCCAGTTTCAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850341 14 + 4876863 C-TTCCAGTTTCAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740729 14 + 115148730 T-TTCCAGTTTCAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023210 14 + 190429646 C-TTACAGTTTCAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187965978 14 + 189454096 C-TTCCAGTTTCAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24357694 14 - 25927173 C-TTCCAGTTTCAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3387430 14 + 4669795 C-TTCCAGTTTCAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344824 14 + 135778131 C-TTCCAGTTTCAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642555 15 - 190850796 CTTTCCAGTTTCAAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131968 15 - 14256875 ATTTCCAGTTCCAAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023716 15 - 2196201 ctttCCAGTTTCAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416653 15 - 5030052 CTTTCCAGTTTCAAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11263218 14 - 11315646 -tttctattttcaat i otoGar3.GL873580 I 7752 C 0 s mm10.chr8 86628202 14 - 129401213 -GTTTTGGTCTCACC i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1475492 14 - 2520184 -TTTCCAGTCCGAAC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e canFam3.chr16 16979618 2 - 59632846 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=526297.000000 s hg38.chr4_KI270789v1_alt 142344 82 + 205944 TGTCTCCCTTCAGTTTAAATATGGAA-TCTATTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACTTTGGAATAACTGAG s panTro5.chr4 192929425 82 + 194502333 TGTCTCCCTTCAGTTTAAATATGGAA-TCTATTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACTTTGGAATAACTGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813074 82 + 195804263 TGTCTCCCTTCAGTTTAAATATGGAA-TCTATTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACTTTGGAATAACTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850355 82 + 4876863 TGTCTCCCTTCAGTTTAAATATGGAA-TCTATTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACTTTGGAATAACTGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740743 82 + 115148730 TGTCTCCCTTCAGTTTAAATATGGAA-TCTATTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACTTTGGAATAACTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023224 82 + 190429646 TATCTCCCTTCAGTTTAAATAGGGAG-TCTACTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACATTGAAATAACTGAG i rheMac8.chr5 C 0 I 607 s macFas5.chr5 187965992 82 + 189454096 TATCTCCCTTCAGTTTAAATAGGGAG-TCTACTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACATTGAAATAACTGAG i macFas5.chr5 C 0 I 701 s macNem1.NW_012013133v1 24357708 82 - 25927173 TATCTCCCTTCAGTTTAAATAGGGAG-TCTACTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACATTGAAATAACTGAG i macNem1.NW_012013133v1 C 0 I 614 s cerAty1.NW_012001672v1 3387444 82 + 4669795 TATCTCCCTTCAGTTTAAATAGGGAG-TCTACTTAAAATAC-AC--CCCCCATTCGAT------TTTAAATGATTACATTGAAATAACTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134344838 81 + 135778131 GATCTCCCTTCAGTTTAAATATGGAG-TCTACTTAAAATAC-AC--CCCCC-TTCGAT------TTTAAATGATTACATTGAAATAACTGAG i chlSab2.chr7 C 0 I 305 s calJac3.chr3 189642570 84 - 190850796 TGTCTCCATTCAGTTTAAATACAGAG-TCTATTTAAAACAC-ACTCCCCCCATTAGAT------TTTAAATGGTTACTTTGGAGTAACTGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13131983 84 - 14256875 TGTCTCCATTCACTTTAAATATGGAG-TCTATTTAAAACAC-ACTCCCCCCATTAGGT------TTTAAATTATTACTTTGGAATAACTGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023731 83 - 2196201 TGTCTCCATTCAGTTTAGATACAGAG-TCTATTTAAAACAC-ACT-CCCCCATTAGAT------TTTAAATGATTACTTTGGAATAACTGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416668 84 - 5030052 TGTCTCCATTCAGTTTAAATATGGAG-TCTATTTAAAACAC-ACTCCCCCCATTAGAT------TTTAAATGATTACTTTGGAATAACTGAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11263232 14 - 11315646 tttct--------------taaggag-cc--------------------------------------------------------------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86628216 70 - 129401213 T-----------GTTTAAGCATTAAACTCTATTTAAACTAT-AG--AACCTTAATAAT------CTTAAATAATTACCTTGGAATACCCA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16979620 16 - 59632846 tatttctatt---tttaag------------------------------------------------------------------------- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1475506 89 - 2520184 CATCTCCTTTCAGTTGAACTATTGAG-TCTACTGGAAACACAAC--TCCCTACCAGATTCTTCATTTAACCGATTTCTTTGGGATGACATGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=30084.000000 s hg38.chr4_KI270789v1_alt 142426 4 + 205944 TCtt s panTro5.chr4 192929507 4 + 194502333 TCtt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813156 4 + 195804263 TCtt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850437 4 + 4876863 TCtt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740825 4 + 115148730 TCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023913 4 + 190429646 tctt i rheMac8.chr5 I 607 C 0 s macFas5.chr5 187966775 4 + 189454096 tctt i macFas5.chr5 I 701 C 0 s macNem1.NW_012013133v1 24358404 4 - 25927173 tctt i macNem1.NW_012013133v1 I 614 C 0 s cerAty1.NW_012001672v1 3387526 4 + 4669795 TCTT i cerAty1.NW_012001672v1 C 0 I 731 s chlSab2.chr7 134345224 4 + 135778131 TCTT i chlSab2.chr7 I 305 C 0 s calJac3.chr3 189642654 4 - 190850796 TGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13132067 4 - 14256875 TGTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023814 4 - 2196201 TGtt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416752 4 - 5030052 TGTT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86628286 4 - 129401213 TTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16979636 4 - 59632846 tttt i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1475595 4 - 2520184 TCTG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e otoGar3.GL873580 11263246 0 - 11315646 C a score=80363.000000 s hg38.chr4_KI270789v1_alt 142430 17 + 205944 ttta------------------ggtaaatccttaa s panTro5.chr4 192929511 17 + 194502333 ttta------------------ggtaaatccttaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813160 17 + 195804263 ttta------------------ggtaaatccttaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850441 17 + 4876863 ttta------------------ggtaaatccttaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740829 17 + 115148730 TTTA------------------GGTAAATCCTTAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023917 17 + 190429646 ttta------------------ggtaaatcctcaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966779 17 + 189454096 ttta------------------ggtaaatcctcaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358408 17 - 25927173 ttta------------------ggtaaatcctcaa i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134345228 17 + 135778131 TTTA------------------CGTAAATcctcaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642658 17 - 190850796 CTTA------------------GGTAGCTCCTCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13132071 17 - 14256875 TTTA------------------GGTAACTCCTCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023818 17 - 2196201 ttta------------------ggtaactcctcag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416756 35 - 5030052 TTTAGGTAACTCCTCAGCACTTGGTAACTCCTCAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11263246 2 - 11315646 ---------------------------------ac i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86628290 17 - 129401213 ATTG------------------GGGATATATTCAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16979641 15 - 59632846 tttg------------------aggaa--cctaca i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1475599 17 - 2520184 TGCG------------------GGAACATCCCCGA i dasNov3.JH570353 C 0 I 253 e micMur3.chr14 17528116 501 - 93316391 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3387530 731 + 4669795 I a score=51361.000000 s hg38.chr4_KI270789v1_alt 142447 8 + 205944 tacttcac s panTro5.chr4 192929528 8 + 194502333 tacttcac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813177 8 + 195804263 tacttcac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850458 8 + 4876863 tacttcac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740846 8 + 115148730 TAATTCAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023934 8 + 190429646 tacttcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966796 8 + 189454096 tacttcac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358425 8 - 25927173 tacttcac i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134345245 8 + 135778131 tacttcac i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642675 8 - 190850796 CACCCCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13132088 8 - 14256875 CACTTCAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023835 8 - 2196201 cacttcac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416791 8 - 5030052 CACTTCAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11263248 8 - 11315646 tatattgt i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86628307 8 - 129401213 TATTTCAC i mm10.chr8 C 0 I 3423 s canFam3.chr16 16979656 5 - 59632846 tactg--- i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3387530 731 + 4669795 I a score=558364.000000 s hg38.chr4_KI270789v1_alt 142455 86 + 205944 tttccatagctgttgc---------a-ccattttacagtcc---ccacagtgcacaagagtcccgatttctcgaca-ttcttgtcaatagttgtgatttt--------------- s panTro5.chr4 192929536 86 + 194502333 tttccatagctgttgc---------a-ccattttacaatcc---ccgcagtgcacaagagtcccgatttctcgaca-ttcttgtcaatacttgtgatttt--------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813185 86 + 195804263 tttccatagctgttgc---------a-ccattttacaatcc---ccgcagtgcacaagagtcccgatttctcgaca-ttcttgtcaatacttgtgatttt--------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850466 87 + 4876863 tttccatagctgttgc---------acccattttacaatcc---ccacagtgcacaagagtcccgatttctcgaca-ttcttgtcaatacttgtgatttt--------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740854 86 + 115148730 tttccatagctgttgc---------a-ccatattacaatcc---ccacagtgcacaagagtcccgatttctccaca-ttcttgtcaatacttgtgatttt--------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189023942 95 + 190429646 ttgccacagctgttgcaccattttaa-ccattttacaaccc---ccacagtgcacaagagtccccatttgtccata-ttcttgtcaatactcgtgatttt--------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966804 95 + 189454096 ttgccacagctgttgcaccattttaa-ccattttacaaccc---ccacagtgcacaagagtccccatttgtccata-ttcttgtcaatacttgtgatttt--------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358433 95 - 25927173 ttgccacagctgttgcaccattttaa-ccattttacaaccc---ccacagtgcacaagagtccccatttgtccata-ttcttgtcgatacttgtgatttt--------------- i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134345253 86 + 135778131 ttgccatagctattgc---------a-ccgttttacaaccc---ccacagtgcacaagagtcccgatttgtccaca-ttcttgtcaatacttgtgatttt--------------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642683 87 - 190850796 Cttccattgctgctgc---------a-ccatttttcaatcc---aaacagtgcccgaaagtcccagtttctccacatttcttgtcaacacatgtgaattc--------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13132096 86 - 14256875 tttccaaagctgttgc---------a-ccattttacaatcc---aaacagtgcacgagagtcccagtttctccaga-ttcttgtcaatacttttgatttt--------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023843 86 - 2196201 tttccaaagctgttgc---------a-ccattttacaatcc---aaacagtgcacaagagtcccagtttctctaca-ttcttgtcaatacttgtgatctt--------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3416799 86 - 5030052 tttccaaaactgttgc---------a-ccattttacaatcc---aaacggtgcacaagagtcccagtttctccaca-tccttgtcaatacttgtgatttt--------------- i aotNan1.NW_018492112v1 C 0 I 3053 s otoGar3.GL873580 11263256 86 - 11315646 ttttcatagctgttgc---------a-ctattttgtaaccctaaaaacagtactcaagtgttctaatttgtccaca-tcctccctgagaatt---atttt--------------- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979661 104 - 59632846 ttttcctagcggctgc---------a-ttattatacatccccatccatagtgcacaaagattctaatttgtcggca-gtcttgccgacacttgtaatttctaaggttttttttct i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e mm10.chr8 86628315 3423 - 129401213 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3387530 731 + 4669795 I a score=134658.000000 s hg38.chr4_KI270789v1_alt 142541 20 + 205944 acttatttattttggtagta s panTro5.chr4 192929622 20 + 194502333 acttatttattttggtagta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813271 20 + 195804263 acttatttattttggtagta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850553 20 + 4876863 acttatttatttgggtagta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740940 20 + 115148730 atttatttattttggtagta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024037 20 + 190429646 acttatttattttggtagta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966899 20 + 189454096 acttatttattttggtagta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358528 20 - 25927173 acttatttattttggtagta i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134345339 20 + 135778131 acttatttattttggtagta i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189642770 20 - 190850796 actcatttattttgatagca i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13132182 20 - 14256875 acttatttattttgatagca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023929 20 - 2196201 acttatttattttgatagca i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263342 20 - 11315646 attcacctattttgatagca i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979765 20 - 59632846 tcttcttctttttaatagta i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e mm10.chr8 86628315 3423 - 129401213 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e colAng1.NW_012116221v1 908003 943 + 2368649 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3387530 731 + 4669795 I a score=21126.000000 s hg38.chr4_KI270789v1_alt 142561 3 + 205944 ttc s panTro5.chr4 192929642 3 + 194502333 ttc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813291 3 + 195804263 ttc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850573 3 + 4876863 ttc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740960 3 + 115148730 ttc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024057 3 + 190429646 ttc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966919 3 + 189454096 ttc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358548 3 - 25927173 ttc i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134345359 3 + 135778131 ttc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 908946 3 + 2368649 ttc i colAng1.NW_012116221v1 I 943 C 0 s calJac3.chr3 189642791 3 - 190850796 ttc i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13132202 3 - 14256875 ttc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023949 3 - 2196201 ttc i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263362 3 - 11315646 gcc i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979785 3 - 59632846 gcc i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e mm10.chr8 86628315 3423 - 129401213 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M e cerAty1.NW_012001672v1 3387530 731 + 4669795 I a score=162341.000000 s hg38.chr4_KI270789v1_alt 142564 19 + 205944 atctgaatgggagtaaggt s panTro5.chr4 192929645 19 + 194502333 atctgaatgggagtaaggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813294 19 + 195804263 atctgaatgggagtaaggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850576 19 + 4876863 atctgaatgggagtaaggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740963 19 + 115148730 gtctgaatgggagtaaggt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024060 19 + 190429646 atctgaatgggagtaaggt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966922 19 + 189454096 atctgaatgggagtaaggt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358551 19 - 25927173 atctgaatgggagtaaggt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388261 19 + 4669795 atctgaatgggagtaaggt i cerAty1.NW_012001672v1 I 731 C 0 s chlSab2.chr7 134345362 19 + 135778131 atctgaatgggattaaggt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 908949 19 + 2368649 atatgaatgggagtaaggt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189642794 19 - 190850796 ctcttaatgagagcaaggt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13132205 19 - 14256875 atctgaatgagagtaaggt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1023952 19 - 2196201 atctgaatgagagtaaggt i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263365 19 - 11315646 atccaattgggagtaaagg i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16979788 19 - 59632846 attattttgggtatgaggt i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e mm10.chr8 86628315 3423 - 129401213 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=453519.000000 s hg38.chr4_KI270789v1_alt 142583 72 + 205944 gatat-at-----cattgcattgcaattggttttgattt-gcatttctctgataatta--gtcactaatt-----atta----ttgagca s panTro5.chr4 192929664 72 + 194502333 gatat-at-----cattgcattgcaattggttttgattt-gcatttctctgataatta--gtcactaatt-----atta----ttgagca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813313 72 + 195804263 gatat-at-----cattgcattgcaattggttttgattt-gcatttctctgataatta--gtcactaatt-----atta----ttgagca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850595 63 + 4876863 gatat-at-----cattg---------tggttttgattt-gcatttctctgataatta--gtcactaatt-----atta----ttgagca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112740982 63 + 115148730 gatat-ac-----cattg---------tgattttgattt-gcatttctctgataatta--gtcactaatt-----atta----ttgagta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024079 63 + 190429646 gatat-ac-----cattg---------tagttttgattt-gcatttctctgataatta--gtcactcatt-----atta----ttgagca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187966941 63 + 189454096 gatat-ac-----cattg---------tagttttgattt-gcatttctctgataatta--gtcactcatt-----atta----ttgagca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358570 63 - 25927173 gatat-ac-----cattg---------tagttttgattt-gcatttctctgataatta--gtcactcatt-----atta----ttgagca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388280 63 + 4669795 gatat-ac-----cattg---------tagttttgattt-gcatttctctgataatta--gtcactcatt-----atta----ttgagca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134345381 62 + 135778131 gacat-ac-----cattg---------tggttttgattt-gca-ttctctgataatta--gtcactcatt-----atta----ctgagca i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 908968 63 + 2368649 gatat-ac-----cattg---------tggttttgattt-gcattcctctgataatta--gtcactcatt-----atta----ttgagca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189642813 67 - 190850796 gataatat-----cattg-----------gttttgatttcgcatttatctgataatta--gtagctagtt-----attattatttgagta i calJac3.chr3 C 0 I 5 s saiBol1.JH378165 13132224 64 - 14256875 gatag-at-----cattt-----------gttttgattt-gcatttatctgataatta--gtagctaatt-----attatta-ttgagca i saiBol1.JH378165 C 0 I 346 s cebCap1.NW_016107886v1 1023971 64 - 2196201 gatag-at-----cattg-----------gttttgattt-gcatttatctgacaatta--gtagctaatt-----attatta-ttgagca i cebCap1.NW_016107886v1 C 0 I 5 s otoGar3.GL873580 11263384 60 - 11315646 gattt-ct-----cctta---------tggttttgattt-gtatcatcatgatgattatcgatggtgaac-----atca----tt----- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86631738 73 - 129401213 GATAG-ATGGTGACATTG---------TGTTACTAATTT-ACATCTCTTTGATGACAG--TTGGTATATTTTTACATTA----TTGGCAA i mm10.chr8 I 3423 C 0 s canFam3.chr16 16979807 55 - 59632846 gatat-ct-----cagtg---------tggttttgattt-gaatttctctgatgatta--at-------------gatg----ttgagca i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=96663.000000 s hg38.chr4_KI270789v1_alt 142655 19 + 205944 -----tcttATACTTCCGTGATG--A s panTro5.chr4 192929736 19 + 194502333 -----tcttATACTTCTGTGATG--A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813385 19 + 195804263 -----tcttATACTTCTGTGATG--A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850658 21 + 4876863 -----tcttATACTTCTGTGATGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741045 21 + 115148730 -----tcttATACTTCTGTGATGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024142 21 + 190429646 -----tcttATACTTCTGTGACAACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967004 21 + 189454096 -----tcttATACTTCTGTGACAACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358633 21 - 25927173 -----tcttATACTTCTGTGACAACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388343 21 + 4669795 -----tcttGTACTTCTGTGACAACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134345443 21 + 135778131 -----tcttGTACTTCTGTGACAACA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 909031 21 + 2368649 -----tcttatacttttgtGACAACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189642885 18 - 190850796 -----tcttat-cttctgtgacc--a i calJac3.chr3 I 5 C 0 s saiBol1.JH378165 13132634 19 - 14256875 -----TCTTACACTTCTGTGACG--A i saiBol1.JH378165 I 346 C 0 s cebCap1.NW_016107886v1 1024040 16 - 2196201 -----tcttatactt---tgacg--a i cebCap1.NW_016107886v1 I 5 C 0 s otoGar3.GL873580 11263444 21 - 11315646 -----tcttgtgcttgtttgccTATG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86631811 14 - 129401213 -----CCTTTAAGTATTGT------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16979862 26 - 59632846 tctttttatatgctcattggtcaATG i canFam3.chr16 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I e dasNov3.JH570353 1475616 253 - 2520184 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=703683.000000 s hg38.chr4_KI270789v1_alt 142674 88 + 205944 CGTGGGAA---TTTTTCTTCATTG-TACAACAGATATC-ATTATAGTGGCGT-AGTTCTACACTCTACACAATTTTTTCT--AACACTACACAAAA s panTro5.chr4 192929755 89 + 194502333 TGTGGGAA---TTTTTCTTCATTG-TACAACAGGTATCCACTATAGTGGCGT-AGTTCTACACTCTACACAATTTTTTCT--AACACTACACAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813404 89 + 195804263 TGTGGGAA---TTTTTCTTCATTG-TACAACAGGTATCCACTATAGTGGCGT-AGTTCTACACTCTACACAATTTTTTCT--AACACTACACAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850679 88 + 4876863 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATATC-ATTATAGTGGCGT-AGTTCTACACTCTACACAATTTTTTCT--AACACTACACAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741066 88 + 115148730 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATATC-ACTATATTGGCAT-AGTTCTACATTCTACACAATTTTTTCT--AACACTACACAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024163 88 + 190429646 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATACC-ATTATACTGGCAT-AATTCTACACTTCACACAATTTTTTCT--AACACTACACCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967025 88 + 189454096 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATACC-ATTATACTGGCAT-AATTCTACACTTTACACAATTTTTTCT--AACACTACACCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358654 88 - 25927173 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATACC-ATTATACTGGCAT-AATTCTACACTTTACACAATTTTTTCT--AACACTACACCAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388364 88 + 4669795 TGTGGGAA---TTTTTCTTCATTG-TACAACAGATACC-ATTATACTGGCAT-AATTCTACACTTTACACAATTTTTTCT--AACCCTACACCAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134345464 88 + 135778131 TGTGGGAA---TTTTTCTTCATTG-TACAACAGACATC-AATATACTGGCAT-AATTCTACACTTTACACGATTTTTTCT--AACACTACACCAAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 909052 85 + 2368649 TGTGGGAA---TTTTTGTTCATTG-TATAACAGAT----AGTCTACTGGCAT-AATTCTACACTTTACACAATTTTTTct--aacactacacaaaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189642903 95 - 190850796 tGTTGGGATTGTTTTCTTTCATTGTTATAAAAGATATC-ATTATATTGGCATAAATTCTACATGCTGCACATTTTTTTTTTCAACACTAAACAAAA i calJac3.chr3 C 0 I 1938 s saiBol1.JH378165 13132653 90 - 14256875 TGTGGGAAT--TTTGTCTTCATTG-TATGAAAGATATC-ATTATATTGGCAT-AGTTCTACATGCTGCA-ATTTTTTTTTTTAACACTAAACAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1024056 89 - 2196201 tgtgggaat--tttttcttcattg-tACAAAAGATATC-ATTATATTGGCAT-AGTTCTTCATGCTGCACATTTTTTTGT--AACACTAAACAAAA i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263465 89 - 11315646 TGTGTGAAA--GTTTTGTTCACTG-TATATCAGATCAT-ATTACCTTAGCTT-AATTCCACAGTATACAACATTTCCTTT--AAAACAAAACTGAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86631825 75 - 129401213 -----------TTTTTATTTAAAG-TACTACAGATAAC-ATTTGGTTGGCAT-TATTACACACTAGACACCACTTTTTCT--AAAATAAAA----- i mm10.chr8 C 0 C 0 s canFam3.chr16 16979888 86 - 59632846 TGTAAGAA---CTTT--TTCATTG-CACAAAGGATACC-ATTACATTGGCAA-AATTCCGCACTGTATGTAATTTCCTCA--AAAACCAAACCAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1475869 86 - 2520184 CGTGGGAAT--TTTTTCCTCACTG-CAT---AGATGCC-ATTATCTTGATAA-GATTCCATACTCTATCCAACTTCCTAT--GAAACCAAAACACA i dasNov3.JH570353 I 253 C 0 e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=1727217.000000 s hg38.chr4_KI270789v1_alt 142762 244 + 205944 GCAA--ACACT-AAATCTAACTTCCAATTGTCAGGATTACTGGTCTACTCCTCT--ACCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA----TTTTTCTTTCCTGTCAAGTC-ACTGTTGACGAGGTTCCTCTGCTCACATTGGCAGTCTCTTTCTTT--------CTCATGATTCTTCAAGTC-GTCATTTTGTTAGAGGCCAAGCTTTCACTCATGGACTGAAGTTATATTGTGTGCTTTTTGC s panTro5.chr4 192929844 244 + 194502333 ACAA--ACACT-AAATCTGACTTCCAATTGTCAGGATTACTGGTCTACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA----TTTTTCTTTCCTGTCAAGTC-ACTGTTGACGAGGTTCCTCTGCTCACATTGGCAGTCTCTTTCTTT--------CTCATGATTCTTCAAGTC-GTCATTTTGTTAGAGGCCAAGCTTTCAATCACGGACTGAAATTATATTGTGTGCTTTTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813493 244 + 195804263 ACAA--ACACT-AAATCTGACTTCCAATTGTCAGGATTACTGGTCTACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA----TTTTTCTTTCCTGTCAAGTC-ACTGTTGACGAGGTTCCTCTGCTCACATTGGCAGTCTCTTTCTTT--------CTCATGATTCTTCAAGTC-GTCATTTTGTTAGAGGCCAAGCTTCCAATCACGGACTGAAATTATATTGTGTGCTTTTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3850767 245 + 4876863 GCAA--ACACT-AAATCTAACTTCCAATTGTCAGGATTACTGGTCTACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---GTTTTTCTTTCCTGTCAAGTC-ACTGTTGACGAGGTTCCTCTGCTCACATTGGCAGTCTCTTTCTTT--------CTCATGATTCTTCAAGTC-GTCATTTTGTTAGAGGCCAAGCTTTCAATCATGGACTGAAATTATATTGTGTGCTTTTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741154 245 + 115148730 GCAA--ACACT-AAATCTAACTTCAAATTGTCAGGATTACTGGTCTACTCCTCT--GCAAACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCAAGTC-ACTCTTAACAAGTTTCCTCTGCTCACATTGGCAGTCTCTTTCTTT--------CTCATGATTCTTCAAGTC-GTCATTTTGTTAGAGGCCAAGCTTTCAATCATAGACTGAAATTATATTGTGTGCTTTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024251 244 + 190429646 GCAA--ACACT-ACATCCAACTTCAAATTGTCAGGATTACTGGTCCACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCAAGTC-ATTCTTGATGAGTTTCCTCTGCTCACATTGGCAGTCCCTTTCCTT--------CTCATGATTCTTTAAATC-TTCATTTTGTTAGAGGCCAAGCTTTCAAGCATGG-CTGAAATTATATTGTGTGCTTTTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967113 244 + 189454096 GCAA--ACACT-ACATCCAACTTCAAATTGTCAGGATTACTGGTCCACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCAAGTC-ATTCTTGATGAGTTTCCTCTGCTCACATTGGCAGTCCCTTTCCTT--------CTCATGATTCTTTAAATC-TTCATTTTGTTAGAGGCCAAGCTTTCAAGCATGG-CTGAAATTATATTGTGTGCTTTTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358742 244 - 25927173 GCAA--ACACT-ACATCCAACTTCAAATTGTCAGGATTACTGGTCCACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCAAGTC-ATTCTTGATGAGTTTCCTCTGCTCACATTGGCAGTCCCTTTCCTT--------CTCATGATTCTTTAAATC-TTCATTTTGTTAGAGGCCAAGCTTTCAAGCATGG-CTGAAATTATATTGTGTGCTTTTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388452 245 + 4669795 GCAA--ACACT-AAATCCAACTTCAAATTGTCAGGATTACTGGTCCACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCATGTC-ATTCTTGATGAGTTTCCTCTGCTCACATTGGCAGTCCCTTTCCTT--------CTCATGATTCTTTAAATC-TTCATTTTGTTAGAGGCCAAGCTTTCAATCATGGACTGAAATTATATTGTGTGCTTTTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134345552 245 + 135778131 GCAA--ACACT-AAATCCAACTTCAAATTGTCAGGATTACTGGTCCACTCCTCT--GCCCACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTTTTTCCTGTCAAGTC-ATTCTTGATGAGTTTCCTCTGCTCACATTGGCAGTCCCTTTCTTT--------CTCATGATTCTTTAAGTC-TTCATTTTGTTAGAGGACAAGTTTTCAATCATGATCTGAAATTATATTGTGTGCTTTTTTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 909137 245 + 2368649 gcaa--acact-aactctgacTTCAAATTGTCAGGATTACCGGTCCACTCCTCT--GCCTACCCATAGGCTGATTATAAATCTTTGAAATTAATTACATCTAAAA---TTTTTTCTTTCCTGTCAAGTC-ATTCTTGATGAGTTTCCTCTGCTCGCATTGGCAGTCCCTTCCTTT--------CTCATGATTCTTTAAATC-TTCATTTTGTTAGAGGCCAAGCTTTCAATCATGGACTGAAATTATATTATGTGCTTTTTTC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13132743 243 - 14256875 GCAA--AAACT-AAATCTAATTTCAAATTGTCAGGATTGCTGGTCTACTCCTCT--GCCCACCCATAGGCTGATGATAAATCTTCG-AATTAATGATATCTCAAA---TGTTTCCTTTCCTGTCAAGTCAACTCTTCAAAGGTTTCCTCTGCTCAAGTTGTCAGCCCCTTTCTTT--------TCCGTTACTCT--AAGTC-TTCGTTTTGTTAGAGACCAAGCTTTCAATTGGGGACTGAAATTATGTAGTGTGCTTTTTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1024145 241 - 2196201 GCAA--ACACT-AAATCTAATTTCAAATTGTCAGGATTGCTGGTCTACCCCTCT--GCCCACCTGTAGGCTGATGATAAATCTTTG-AATTAATGATATCTAAAA---TGTTTCCTTTCCTGTCAAGTC-ACTCTTC-AAGGTTTCCTCTGCTCAAGTTGCCAGTCCCTTTCTTT--------CCTGTTACTCT--AAGTC-TTCGTTTTGTTAGAGGCCAAGCTTTCAATCAGGGACTGAAATTATATAGTGTGCTTTTTTC i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263554 183 - 11315646 GCAA--ACTCT-AAATCTAACTCTAACTTGTCAGGATTACTAGTTTACTCTCCCTAGCACTCCCACAG--TGATTATAAATCTCTAGAATTAATTCCTTCCAAAT---TTTCTCCTTTTCCTTCAAGTT------------GACTGCCTGCCTCACATCAGAAGTA-CTTTCTTG--------CTCAT----------------------------------------------GGACTGGGA-TATACCATATTTTTC---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86631900 154 - 129401213 ATAATGACTCT-AAATCTAA-TTCCATTTGCTTGGATT----------TCCTCT--ACCAACCAACAC----ATTATAAATCTTTGTAATTGATTGCAT-----------------------GCAAATC--------------------------------------------TC--------TCCATAGTTTTTCAATCT----------------GACCAGTTGTAAACAATAGACTGAAATTACATGATGTGTTTTTCTT i mm10.chr8 C 0 I 6 s canFam3.chr16 16979974 226 - 59632846 ACAA--ACTGTGAAATATAACTCCAAGTTGTCAGGATTACTGGTTTACATCCCA--GCTC------------TTTATAAATCTCTGGAATTAATTGCGTACACGTTTTTTTTTTCTTTTCCTACAAGTT------------GACCACTCTCCTAATATTGGTAGCCTCTTTCTTTGTTAGAGACTAAGGTTTCTTT-------TTTTTTTTTTTGAGACTAAGGTTTCAACTGTGGACTGGAATTATGTCACATGCTTTTC-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1475955 230 - 2520184 ACAG--ACTCT-GAAATCACTATCCAACTCTCAGGCTTACTGGTTGACCATTCT-------CCCCTAGATTGATTATCAATCTTTGGCATTAGCAGCATCTAAGT---GTTCTTCTTTTCCTTCAAGTT------------GGCCACTCTCCCCGCATGGGTGGTCTCTCTCCTT--------CTTCTGACTCCTTATGTTTTTCACTTTGTTAGAGCCTAAGTTTTCAACCATGGACTGAAACTATATCTCACGTTTCCTCC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189642998 1938 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I e manLeu1.NW_012102221v1 2799741 2630 - 2847728 M a score=2483274.000000 s hg38.chr4_KI270789v1_alt 143006 294 + 205944 CTGAGTGTTTAATCCCTTAATTTACAAGCGGATGTAGGAGTGCATACCCAGGAGGTGAGGGCA-aag-actcccgttga---gtc-tttggaatctcaaatctgttaccgttttggcttgggacaac-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------atgataacagtt-----------gtcctacatacatcataactctcttt-----gaatcaatgataattaatccatgtgaaaagctttcaaaaac-------------ttgtaaaaatccc-tcataattatatg---gtgttttacaatttacaaagaacttt s panTro5.chr4 192930088 294 + 194502333 CTGAGTGTTTAATCCCTTAATTTACAAGCGGATGTAGGAGTGCATACCCAGGAGGTGAGGGCA-AAG-ACTCCCGATGA---GTC-TTTGGAATCTCAAATCTGTTACCGTTTtggcttgggacaac-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------atgataacagtt-----------gtcctacatacatcataactctcttt-----gaatcaatgataattaatccatgtgaaaagctttcaaaaac-------------ttgtaaaaatccc-tcataattacatg---gtgttttacaatttacaaagaacttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192813737 294 + 195804263 CTGAGTGTTTAATCCCTTAATTTACAAGCGGATGTAGGAGTGCATACCCAGGAGGTGAGGGCA-AAG-ACTCCCGATGA---GTC-TTTGGAATCTCAAATCTGTTACCGTTTtggcttgggacaac-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------atgataacagtt-----------gtcctacatacatcataactctcttt-----gaatcaatgataattaatccatgtgaaaagctttcaaaaac-------------ttgtaaaaatccc-tcataattacatg---gtgttttacaatttacaaagaacttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851012 294 + 4876863 CTGAGTGTTTAATCCCTTAATTTACAAGCGGATGTAGGAGTGCATACCCAGGAGGTGAGGGCA-aag-actcccgttga---gtc-tttggaatctcaaatctgttaccgttttggcttgggacaac-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------atgataacagtt-----------gtcctacatacatcataactctcttt-----gaatcagtgataattaatccatgtgaaaagctttcaaaatc-------------ttgtaaaaatccc-tcataattatatg---gtgttttacaatttacaaagaacttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741399 297 + 115148730 CCGAGTGTTTAATCCCTTAATTTAGAAGCGGATGTAGGAGTGCATACCCAGGAGGTGAGGGCA-AAG-AATCCCGTTGACGGAGC-ACTGGAATCTCAAATCTGTTACCGTTTtggcttgggacaac-aaacatcctgtcagtctcaattgctgtgtaattgaaaagaga-------------atgataacaatt-----------gtcctacgtacatcgtaactctcttt-----gaatcaatgataattaatacatgtgaaaagctttcaaaaac-------------ttgtaaaaatccc-tcataattatatg---gtgttttacaatttacaaagaacttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024495 309 + 190429646 CTGAGTGCTTAATCCCTTACTTTACAAGCGGATGTGGGAACGCACACCCAGGAGGTGA-GGTG-AAG-AATCCCGTTGAGGGAGC-ACTGgaatctcaaatctgttactattttggctggggacagc-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacatcataactctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACATTTACAAGGGATTTTTACAaatccc-tcataattagatg---gtgttttacaatttacaacgaacttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967357 309 + 189454096 CTGAGTGCTTAATCCCTTACTTTACAAGCGGATGTGGGAACGCACACCCAGGAGGTGA-GGTG-AAG-AATCCCGTTGAGGGAGC-AATGGAATCTCAAATCTGTTACTATTTTGGCTGGGGACAGC-AAACATCctgtcagtctcaattgctgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacattataactctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACATTTACAAGGGATTTTTACAaatccc-tcataattagatg---gtgttttacaatttacaacgaacttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24358986 309 - 25927173 CTGAGTGCTTAATCCCTTACTTTACAAGCGGATGTGGGAACACACACCCAGGAGGTGA-GGTG-AAG-AATCCCGTTGAGGGAGC-ACTGgaatctcaaatctgttactattttggctggggacagc-aaacgtcctgtcagtctcaattgctgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacattataactctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACATTTACAAGGGATTTTTACAaatccc-tcataattagatg---gtgttttacaatttacaacgaacttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3388697 309 + 4669795 CTGAGTGCTTAATCCCTTAATTTACAAGCGGATGTAGGAACGCACACCCAGGAGGTGA-GGTG-AAG-AATCCCGTTGAGGGAGC-ACTGgaatctcaaatctgttactattttggctggagacagc-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------atagtaacaatt-----------gtcctacatacattataacgctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACGTTTACAAGGGATTTTTACAaatccc-tcataattagatg---gtgttttacaatttacaacgaacttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134345797 309 + 135778131 CTGAGTGTTTAATCCCTTAATTTACAAGTGGATGTAGGAACGCACACCCAGGAGGTGA-GGTA-AAG-AATCCCGCTGAGGGAGC-ACTGGAATCTCAAATCTGTTACTATTTTGGCTGGGGACAAC-AAACATCctgtcagtctcaactgccgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacgttataactctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACTTTTACAAGGGATTTTTACAaatccc-tcataattatatg---gtgttttacaatttacaacgaacttt i chlSab2.chr7 C 0 I 311 s manLeu1.NW_012102221v1 2802400 307 - 2847728 CTGAGTGCTTAATCCCTTAATTTACAAGCGGATGTAGGAACGCACACCCAGGAGGTGA-GGTG-AAG-AATCCCGTTGAGGGAGC-ACTGgaatctcaaatctgttactattttggctggagacagc-aaacatcctgtcagtctcaattgctgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacattataactctc--t-----gaatcagtgataattaatacatgtgaaaagctttCAAAAACGTTTACAAGGGATTTTTACAaatccc-tcataattagatg---gtgttttacaatttacaacgaacttt i manLeu1.NW_012102221v1 M 2630 C 0 s colAng1.NW_012116221v1 909382 308 + 2368649 CTGAGTGTTTAATCCCTTAATTTACAAGCGGATGTAGGAACGCATACCCAGGAGGTAA-GGTA-AAG-AATCCCGTTAAGGGAGC-ACTGGAATCTCAAATCTGTTACCATTTtggcttgggacaac-aaacatcctgtcagtctcaactgctgtataattgaaaagaga-------------ataataacaatt-----------gtcctacatacatcataactctcttt-----gaatcaatgataattaatacatgtgaaaagctttCAAAAACTTTTACAA-GGATTTTTACAaatccc-tcataattatatg---gtgttttacaatttacaacgaacttt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13132986 295 - 14256875 CTGAGTGTTTAATCCCTTAATTTACAAGTAGATGTAGCAGTGCATAGCCAGCACGTGA-GGTA-AAG-A--ACCATTGATGGAGG-ACTGGAATCTGAAATCTGTCACCACGTTGGCTTGGGATGAC-AAACCTCCTGCGGGTGTCAATTGTTGTATAATTGAAAGGAGA-------------CTAATAACAATT-----------GTTCTGCATACATCATAACTCTCTTT-----AAATCAATGATAATTAACACATGTG-AAAGCTTTCAAAAAC-------------TTCtaaaaatccc-tcataatta-atgttagggttttacaatttacaaagaacttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1024386 294 - 2196201 CTGAGTGTTTAATCCCTTAATTTACAAGTGGATGTAGCAGTGCATAGCCAGGACGGGA-GGTA-AAGCA--CCCATTGATGGAGC-ACTGGAATCTGAAATCTGTTACCATGCTGGCTTGGGACAAC-AAACCTCCTGCCGGTGTCAATTGCTGTCTAATTGAAAGGAGA-------------CTAATAACAATT-----------GTTTTGCATACATCATAACTCTCTTT-----AAATCAGTGATAATTAATACATGCGAAAAGCTTTCAAAAAC-------------TTCtaaaaatccc-tcataatta-atg---gcgttttaccatttacaaagagcttt i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11263737 273 - 11315646 CTGTGTGTTTAGTCTCTTCATTCAGAAGTAGAAGTAGGAGCAGGGACCCAGGAGCTGA-GGCATGAA-AACCCCATGGAGCAAGC-TCTGGAGTGTGGAATCTGTTACAATA-TGGCTCAGAACAA---------CTTTCAGTCACAATTGTTGTATAATTAACAAGAGA-------------ATAGTAACAAAT-----------GCCCTACATATGTCACCGGTCTTTTT-----AAGTTGTTGATAATC----CATGCGGAAGGCTTTCAAACAC-------------TTGTAAAAATTCC-TCACAA----------A----TTATAATTTAGAAAGAACTTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86632060 274 - 129401213 CTGGATGTTTAATCTGTTGATTGACAGGAA----TAGAATTAACCATAGAAGAGATGAAGGGA-AAG-AATCCTGTTGACTAAAT-GCCTGAATCTAGAATCTGTT--TGATATGAATTGGGCCAAC-AAACATTCAGTCATTCTCAATTGTTCGATTATTAAAAGGAAA------------------------T-----------GCCACCCATTCAACATGATTCTCTTTTATAAAAGTCAGCAATGATATATATATATATAAATGGCACTAAAAC------------TGTATAGGAATTCC-TCA-------------A--TTTTATAATTTATATAGAACTTC i mm10.chr8 I 6 I 9 s canFam3.chr16 16980200 298 - 59632846 CTTGAAGTTTAATTCCT---TTCAGAAGTAGAAATAGGAGTGGGCA-CCAGAAGGTGAGGAGA-AAG-AATCCTATTTCTAGAGCGATTAGAATGTGGAATCTGTTA----TATGGATTAGGAAAACAAAACATCCTGTCAGTCTCAACTGttataatattaaaaaaaaaaaatCAAAGTCCTACAATAACAAATAAGAATAACAAATAGCAAATATATCACAACTTTCTTT-----AAGTCACTTGTAA--AATATATG---AAAGCCTTCAAAATC-------------TTGTAAAAATCCC-------------a---gtgttttataatttataaagaacttt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1476185 274 - 2520184 --CAGATTTCACTCACTTAATTCTCAGGTAG-------AGTGGACATCCAGCTGGTGAAGGGG-ACC-AATCTTATCACCAGAGC-ATT-GAGTTTGAACTCCGTTACCACA-TGGCTTTGGACAAT-AAACATCCTGTTGGTCTCAACTATCTTATTATTAAAAAGGGA-------------ATGCTTAGAAAC-----------GCCGTAC-TACATCAT-GCTACTTTA-----AAGTCTAT-------AATACGTGTGATGTACTT--AAAAAC-------------CCAGAAAAGCccccttaaaattatatt---g--tttcataatttataaggagcttt i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189642998 1938 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I a score=1471004.000000 s hg38.chr4_KI270789v1_alt 143300 151 + 205944 cacatgcagatttct---cacgtgattttt------atg---ttttgag---ggcagagtgaga-----aatt------atA------AAGTATCTGTGTATATGCCAATAATGATGCCTAATATCCCCCACTTTACATATT--TAAAA--GACCTTTAAAATTATGGCTTTTCCTAGTTTTCACAG s panTro5.chr4 192930382 159 + 194502333 cacatgcagatttct---catgtgattttt------atg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATTTGTGTATATGCCAATAACGATGCCTAATATCCCCCACTTTACATATT--TAAAA--GACCTTTAAAATTATGACTTTTCCTAGTTTTCACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814031 159 + 195804263 cacatgcagatttct---catgtgattttt------atg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATTTGTGTATATGCCAATAACGATGCCTAATATCCCCCACTTTACATATT--TAAAA--GACCTTTAAAATTATGACTTTTCCTAGTTTTCACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851306 159 + 4876863 cacatgcagatttct---cttgtgattttt------atg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTGTGTATATGCCAATAACGATGCCTAACATCCCCCACTTTACATATT--TAAAA--GACCTTTAAAATTATGACTTTTCCTATTTTTCACAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741696 162 + 115148730 cacatgcagatttct---catgtgattttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTACAAAGTATCTATGTATATGCCAATAATGATGCCTAATATACCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACTTTTCCTAGTTTTCACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189024804 162 + 190429646 cacatgcagatttct---catgtgagtttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTTTGTATATGCTGATAATGATGCATAATACCCCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACTTTTCTGAGATTTCACAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967666 162 + 189454096 cacatgcagatttct---catgtgagtttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTTTGTATATGCTGATAATGATGCATAATACCCCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACTTTTCTGAGATTTCACAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359295 162 - 25927173 cacatgcagatttct---catgtgagtttta---taatg---ttttgag-tgggcaaagtgaga-----aatt------atATTTATAAAGTATCTTTGTATACGCTGATAATGATGCATAATACCCCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACTTTTCTGAGATTTCACAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389006 162 + 4669795 cacatgcagatttct---catgtgagtttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTTTGTATAGGCTGATAATGATGCATAATACCCTCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACTTTTCCGAGATTTCACAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134346417 162 + 135778131 cacatgcagatttct---catgtgattttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTTTGTATATGCTGAAAATGATGCATAATATCCCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTATGACATTTCCTAGATTTCACAG i chlSab2.chr7 I 311 C 0 s manLeu1.NW_012102221v1 2802707 162 - 2847728 cacatgcagatttct---catgtgagtttta---taatg---ttttgag-tgggcagagtgaga-----aatt------atATTTATAAAGTATCTTTGTATACGCTGATAATGATGCATAATACCCCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTAGGACTTTTCCGAGATTTCACAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 909690 162 + 2368649 cacatgcaggtttct---cctgtgagtttta---taaTG---TTTTGAG-TGGAAAGAGTGAGA-----AATT------ATATTTATAAAGTATCTTTGTATATGCTGATAATGATGCATAATATACCCCACTTTCCATATT--TAAAA--GACCTTTAAAATTAtgacttttcctagatttcacag i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13133281 153 - 14256875 cacatgcagatttct---catgtaattttca---taaTG---TTTTGAG----------TGAGA-----AATT------ATATTTATGAAGTATCTGTGTATACACCAACAACAATGCGTGATATCCCCCATTTTCCATATT--TAAAA--GACCTGTAAAATTATGGCTTTTCCTAGATTTCACAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1024680 153 - 2196201 cacatgcagatttct---catgtaattttta---taaTG---TTTTGAG----------TGAGA-----AATT------ATATTTACAAAGTGTCTGTGTATATGCCAACAAGAATGCCTGATATCCCCCATTTTTCATATT--TAAAA--GACCTGTAAAATTATGGCTTTTCCTAGATTTCACAG i cebCap1.NW_016107886v1 C 0 I 440 s otoGar3.GL873580 11264010 172 - 11315646 CACTTGTGGGTTTCT---CATGTAATTTTTA---CAATG---TTTTGAGATAGGCAGAATGAGatagatatttacatagatatttacaAAGTATCTATGCATCTGACAATAATGGTACCTTAT---CTAGATTTTATGTATTA-CAAAA--GGCCTTTAAAATTATGATTTTTCCTAGATTTCATTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86632343 166 - 129401213 tatgtgtgtatatgtgtgtgtgtAATTTTTT---CAATATGCTGCTGAGTTGGCCAGAATAAAA-----CATC------TTGTTTCTAAATTGACTACATTTATGCTAGGAAT-----ATACTAGCATCTGTATTTTGTATA--TAAAATTGACTTTTAAAATTATGACACCTCTCAGGTTTCATAG i mm10.chr8 I 9 C 0 s canFam3.chr16 16980498 166 - 59632846 cacatgcagattgtt---catgtaatttttacagtaata---ttttcaggtagacagagcaaga-----aatt------atATTTACAAAGTACCTATGCAAATGTCAATAATGGTAACAGATATCCCC--TTTTACATGTGAGAGAAA--GACCTTTAAAAATATGAATTTTCCTAAATCTCAGAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1476459 164 - 2520184 cacatctagatttct---catttaatttttataataatg---ttctgaagtgggaagagagaga-----aatt------atATTTACAAAGTATTCATGTGTATATCAGTAATGATACCTAATAT-CTCCATCATACACATC--AAAAA--GGCCTTTAAAATTATGA-TTTTCCTAGATTTCAGAG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189642998 1938 - 190850796 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I a score=24518.000000 s hg38.chr4_KI270789v1_alt 143451 6 + 205944 CACATT s panTro5.chr4 192930541 5 + 194502333 CACAT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814190 5 + 195804263 CACAT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851465 6 + 4876863 CACATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112741858 5 + 115148730 CACAT- i nomLeu3.chr7b C 0 I 301 s rheMac8.chr5 189024966 5 + 190429646 CACAT- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967828 5 + 189454096 CACAT- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359457 5 - 25927173 CACAT- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389168 5 + 4669795 CACAT- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134346579 5 + 135778131 CACAT- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2802869 5 - 2847728 CACAT- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 909852 5 + 2368649 cacat- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13133434 5 - 14256875 TATAT- i saiBol1.JH378165 C 0 I 676 s otoGar3.GL873580 11264182 5 - 11315646 TTAAT- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86632509 5 - 129401213 GATAG- i mm10.chr8 C 0 C 0 s canFam3.chr16 16980664 5 - 59632846 TACAT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1476623 5 - 2520184 TACCT- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189642998 1938 - 190850796 I e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I a score=1077173.000000 s hg38.chr4_KI270789v1_alt 143457 123 + 205944 AAAAAAGCCAATACCACTACACAGGTG-TGTAGTTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--CTCTAGCTTCCGTAGTTGTTACTCGAGTAGAAGAGTACTGAA- s panTro5.chr4 192930546 123 + 194502333 AAAAAAGCCAATACCACTACACAGGTG-TGTAGTTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--CTCTAGCTTCCGTAGTTGTTACTTGAGTAGAAGAGTACTGAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814195 123 + 195804263 AAAAAAGCCAATACCACTACACAGGTG-TGTAGTTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--CTCTAGCTTCCGTAGTTGTTACTTGAGTAGAAGAGTACTGAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851471 123 + 4876863 AAAAAAGCCAGTACCACTACACAGGTG-TGTAGTTTCTGGTCTTGTGCA-CCGACCATTTCCTGCACCATCTTTTTGTATG-CT--CTCTAGCTTCCGTAGTTGTTACTTGAGTAGAAGAGTACTGAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742164 123 + 115148730 aaaaaGGCCAATACCACTACACAGGTA-TATAGTTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTAGCTTCCATAGTTGTTATTCCAGTAGAAGAGTACTGAA- i nomLeu3.chr7b I 301 C 0 s rheMac8.chr5 189024971 123 + 190429646 AAGAAAGCCAATACCACTACACAGGTG-TGCAGTTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967833 123 + 189454096 AAGAAAGCCAATACCACTACACAGGTG-TGCAATTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359462 123 - 25927173 AAGAAAGCCAATACCACTACACAGGTG-TGCAATTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389173 123 + 4669795 AAGAAAGCCAATACCACTACACAGGTG-TGCAATTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134346584 123 + 135778131 AAGAAAGCCAATACCACTACACAGGTA-TGTAATTTCTGGTCTTGTGCA-CTGACCACTTCCTACACCATCTTTTTGTGTG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2802874 123 - 2847728 AAGAAAGCCAATACCACTACACAGGTG-TGCAATTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 909857 123 + 2368649 aagagagccaataccattacacaggtg-tgtaatttctggtcttgtgca-ctgaccacttcctacaccatctTTTTGTATG-CT--TTTTACCTTCTGTAGTTGTTATTTGAGTAGAAGAGTATTGAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189644936 123 - 190850796 aaaaaaGCCAGTCCCACCACACAGGGG-TGTAATTTCTGGTCTTGTGCA-CTGACCATTTCCTACACCATCTTCTCATATG-CT--TTTCCGTTTCCACAGCCGTCATTCGAGTAGGGGAGTACTGAC- i calJac3.chr3 I 1938 C 0 s saiBol1.JH378165 13134115 122 - 14256875 aaaaaaGCCAGTCCCACTACACAGGGA-TGTAATTTCTGGTCTTGTACA-CTGACCATTTCCTACACCATCTTCTC-TACC-CT--TTTTCGCATCCAAAGCTGTTATTCGAGTAGAGCAGTACTGTT- i saiBol1.JH378165 I 676 C 0 s otoGar3.GL873580 11264187 112 - 11315646 AAAAGAACAAATATCATCACATAAGTGTTTTGATATCTTGTCTT-CGAG-GTCATCACttt--------tttttttttttt-tt--ttttAGCTTCTATGGCTGTTTTTAG---AGAAGAGTGCTGGT- i otoGar3.GL873580 C 0 I 8 s mm10.chr8 86632514 120 - 129401213 AGATGAATTAATATCATTCCATGTGCC-T-TGATTTCTGTTATAAGATA-TT--CTGTTTCCTACAGTCTCTTTATATACA-TG--TTTTGACTTCTCTGATTATTGTTAGTATATAAGAATACTGAT- i mm10.chr8 C 0 I 1 s canFam3.chr16 16980669 126 - 59632846 AAGTGAGCCCATGTCATCCTACAAGTGTTTTGCTTTCTTGTCTGGTGTGCCTCACTATTTCCTACACAGTCTTTCCATACATTT--TTTTAGCCTTTATCATTGTTATTCAAATAGAAGAGTACTGCT- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1476628 127 - 2520184 AAATGAACCAGCACTATCACACAAGTG-TTTGATCTCTTGTCTGATGAGTCCCACTGTTTCCTATGCTGTCTTTTCATATA-TTTATATTAGTCTCTGTCTCTATTATTAGAGCAGAAGAGTACTGTTG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 3416885 3053 - 5030052 I a score=1115955.000000 s hg38.chr4_KI270789v1_alt 143580 120 + 205944 AGGCCACGTAGAA-----------TATACAGCTTGGTTTCATCCCACT-GA---------TAAAAATCTACTTTTAACATA--CATGTTAAAATAATCAAGCCTGACTAAATTATT-TTTGTA-TTTTTTCCATTTTACCTGTTA s panTro5.chr4 192930669 120 + 194502333 AGGCCACGTAGAA-----------TATACAGCTTGGTTTCATCCCACT-GA---------TAAAAATCTACTTTTAACATA--CATGTTAAAATAATCGAGCCTGACTAAATTATT-TTTGTA-TTTTTTCCATTTTACCTGTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814318 120 + 195804263 AGGCCACGTAGAA-----------TATACAGCTTGGTTTCATCCCACT-GA---------TAAAAATCTACTTTTAACATA--CATGTTAAAATAATCGAGCCTGACTAAATTATT-TTTGTA-TTTTTTCCATTTTACCTGTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851594 120 + 4876863 AGGCCACGTAGAA-----------GACACAGCTTGGTTTCATGCCACT-GA---------TAAAAATCTACTTTTAACATA--CATGTTAAAATAATCGAGCCTGACTAAATTATT-TTTGTA-TTTTTTCCATTTTACCTGTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742287 120 + 115148730 AGGCCACATACAA-----------TATACAGCTTGGATTCATCCCACT-GA---------TAAAAATCTACTTTTAACATA--CATGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TTTTTTCCATTTTATGTGTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025094 120 + 190429646 AGGCCATGTAGAA-----------TATACAGCTTGGTTTGATGCCAGT-GA---------TAAAAATCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TGTTTTCCATTTCACCTGTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187967956 120 + 189454096 AGGCCATGTAGAA-----------TATACAGCTTGGTTTGATGCCAGT-GA---------TAAAAATCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TGTTTTCCATTTCACCTGTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359585 120 - 25927173 AGGCCATGTAGAA-----------TATACAGCTTGGTTTGACGCCAGT-GA---------TAAAAATCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TGTTTTCCATTTCACCTGTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389296 120 + 4669795 AGGCCACGTAGAA-----------TATACAGCTTGGTTTGATCCCAGT-GA---------TAAAAGTCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TCTTTTCCATTTCACCTGTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134346707 120 + 135778131 AGGTCACGTAAAA-----------TATACAGCTTGGTTTGATCCCAGT-GA---------TAAAAATCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTG-TCTTTTCCATTTCACCTGTTA i chlSab2.chr7 C 0 I 183 s manLeu1.NW_012102221v1 2802997 120 - 2847728 AGGCCACGTAGAA-----------TATACAGCTTGGTTTGATCCCAGT-GA---------TAAAAATCTACATTTAACATA--CGTGTTAAAATAATTGAGACTGACTAAATTATT-TTTGTA-TCTTTTCCATTTCACCTGTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 909980 121 + 2368649 AGGCCACGTAGAA-----------TATACAGCTTGGTTTGATCCTAGT-AA---------TAAAAATCTACATTTAACATA--TGTGTTAAAATAATTGACACTGACTAAATTATT-TTTGCATTTTTTTCCATTTCACCTGTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645059 119 - 190850796 AGGCCACATAGCA-----------TAAACAGCTTGGCTTCATCCCACT-GA---------TAAAAATCTACATTTAACATG--CATGCTAAAGTAATCACGACG-CCTACATTATT-TTTGTA-TTTTTTCCTTTTTACCTGTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134237 119 - 14256875 AGGCCATGTAGAA-----------TAAACAGCTTGGTTTCATCCCGCT-GA---------TAAAAATCTACATTTAACATG--CATGTTAAAATAATCAAGACT-ACTACGTTATT-TTTGTA-TTTTTTCCATTTTACCTGTTG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1612075 119 + 5030052 AGGCTACGTAGAA-----------TAAACAGCTTGGTTTCATCCCACT-GA---------TAAAAATCTACATTTAACATG--CACGTTAAAATAATCAAGACT-GCTACATTATT-TTTGCA-TTTTTTCCATGTTACCTGTTG i aotNan1.NW_018492112v1 n 3053 C 0 s otoGar3.GL873580 11264307 130 - 11315646 ATACAATATAAAGGTTAATTTTTTTATAAAGCTTAATTTTATTCTGCT-GA---------AATAAATGTACATTCAAAATA--TGTGTTATAATAATCAATACTATCTAAATTA-T-TTTGTC-TCTTTTCTGTTTGTTTTCTAA i otoGar3.GL873580 I 8 C 0 s mm10.chr8 86632635 107 - 129401213 GGGCCATATGGAA-----------TATAAAAAATAGCTCTATACCACTAGA---------AAAAAGTCTACATTTAAAAT----GTCTTAAGATACT-------------GTTATTGTTTTTA-TCTTGTCAGGATTTCCTTTTA i mm10.chr8 I 1 C 0 s canFam3.chr16 16980796 116 - 59632846 GGGTCACATGGAA-----------TATAAAACTTAGTTTCATCTCACT-G-----------AAATATGTATTTTTGAAATG--TTCATTAAAATAATAAGATTTATATGAATCATT-TTTGT--CTTTTTCTATTTT-CCTGTTA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1476755 126 - 2520184 AGGCCATATGGGA-----------TACAAAACTCAGTTTCACTCAGCT-GAGGTTAAATCTAGATAACCATATGTAACAACATCATACTGAGATAATC---ACCGTAGGGATTATT-TTTCTC-TTTCCATCATATT--CTGGCA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I a score=192579.000000 s hg38.chr4_KI270789v1_alt 143700 19 + 205944 TCAACTTTTTAATTAAGCA s panTro5.chr4 192930789 19 + 194502333 TCAACTTTTTAATTAAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814438 19 + 195804263 TCAACTTTTTAATTAAGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851714 19 + 4876863 TCAACTTTTTAATTAAGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742407 19 + 115148730 TCAACTTTTTAATTAAGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025214 19 + 190429646 TCAACTTTTTAATTAAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968076 19 + 189454096 TCAACTTTTTAATTAAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359705 19 - 25927173 TCAACTTTTTAATTAAGCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389416 19 + 4669795 TCAACTTTTTAATTAAGCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347010 19 + 135778131 TCAACTTTTTAATTAAGCA i chlSab2.chr7 I 183 C 0 s manLeu1.NW_012102221v1 2803117 19 - 2847728 TCAACTTTTTAATTAAGCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910101 19 + 2368649 CCAACTTTTTAATTAAGCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645178 19 - 190850796 TCAAGTTTTTAATTAAGCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134356 19 - 14256875 TCAAGTTTTTAATTAAGCA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1612194 19 + 5030052 TCAAGCTTTTAATTGAGCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11264437 18 - 11315646 -AGAACATTTTATTGAGTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86632742 18 - 129401213 TTAATTTTTT-ATCAAGCA i mm10.chr8 C 0 I 1397 s canFam3.chr16 16980912 18 - 59632846 TCAAGTTTTT-ATTAAACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1476881 9 - 2520184 CCAATTGTA---------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I a score=1223630.000000 s hg38.chr4_KI270789v1_alt 143719 135 + 205944 ATGGGGCCATGGTAGGCAGGGTA----------------------------Ttccctagaacttgtgaatatgttaccctacatgacagaa-ggac-t--ttcagatgtaattaaacttaatgacgttgagttagagagagggtcctg---------------cccagtggaatcacaaggg s panTro5.chr4 192930808 135 + 194502333 ATGGGGCCATGGTAGGCAGGGTA----------------------------Ttccctagaacttgtgaatatgttaccctacatgacagaa-ggac-t--ttcagatgtaattaaacttaatgacgttgagttagggagagggtcctg---------------cccagtggaatcacaaggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814457 135 + 195804263 ATGGGGCCATGGTAGGCAGGGTA----------------------------Ttccctagaacttgtgaatatgttaccctacatgacagaa-ggac-t--ttcagatgtaattaaacgtaatgacgttgagttagggagagggtcctg---------------cccagtggaatcacaaggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851733 135 + 4876863 ATGGGGCCATGGTAGGCAGGGTA----------------------------Ttccctggaacttgtgaatatgttaccctacatgacagaa-ggac-t--ttcagatgtaattaaacttaatgacgttgagttagggagagggtcctg---------------cccagtggaatcacaaagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742426 131 + 115148730 ATGGGGCCACGGTAGGCAGGA--------------------------------ccctagaacttgtgaatatgttaccctacatgacagaa-agac-t--ttcagatgtaattaaacttaatgacgttgagttagggagagggtccta---------------cccagtggactcacaaggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025233 135 + 190429646 ATGGGGCCGTGGTAGGCAGGGTA----------------------------Ttccgtagaacgtgtgcatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcatgaggg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968095 135 + 189454096 ATGGGGCCGTGGTAGGCAGGGTA----------------------------TTCTGTAgaacgtgtgcatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcacgaggg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359724 135 - 25927173 ATGGGGCCGTGGTAGGCAGGGTA----------------------------Ttccgtagaacgtgtgcatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcacgaggg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389435 135 + 4669795 ATGGGGCCGTGGTAGGCAGGGTA----------------------------Ttccctagaacgtgtgcatatgttaccctacatgacagaagggaa-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcacgaggg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347029 135 + 135778131 ATGGGGCCACGGTAGGCAGGATA----------------------------Ttccctagaacgtgtgcatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgatattgagatagggagatggtcctg----------------ccagtggaatcacaaggg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803136 135 - 2847728 ATGGGGCCTTGGTAGGCAGGGTA----------------------------Ttccctagaacgtgtgcatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcacgaggg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910120 135 + 2368649 ATGGGGCCATGGTAGGCAGGGTA----------------------------Ttccctagaacatgtgaatatgttaccctacatgacagaagggac-t--ttcagatgtaattaaacttaatgacattgagatagggagatggtcctg----------------ccagtggaatcacaaggg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645197 136 - 190850796 ATGGGGCCATGGTAGGCAGGATG----------------------------Ttccctagaacttgtgaatatgtcatcccacacgaaaggagggactt--tttgtatgtaattaaatttaatgatgttgagatagggagctggtcctg---------------cccagtggaatcac-agct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134375 134 - 14256875 ATGGGGCCATGGTAGGCAGGATA----------------------------Ttccctagaacttgtgaatatgttatcccacacgaaagaaggaac-t--ttcgtat-taattaatcttagtggtgctga-atagggagctggtcctg---------------cccagtgcaatcgcaaggg i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1612213 136 + 5030052 ATGGGGCCACGGTAGGCAGGATA----------------------------Ttccctagaacttgtgaatatgttaccccacatgaaggaagagac-t--ttcgtatgtaattaaacttaatggtgttgagatagggagctggtcctg---------------cccagtggaatcacaaggg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11264455 175 - 11315646 ATGGGGCtatggtaggcagaacagtggcccc-caaagatgtcaatatt---ctttctggaacttgtaaaaatgctgccctacaggacagaggggac-a--tttacacataattgaagttaatggccttgacataggaagagcaccctggagtatctgggtgggttcaatgtaaccacaaggg i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16980930 177 - 59632846 ATAGGTCtgtggtaggcagaaaaatggcccctcaaggatgcctacatcctaatccatggaatatatggatatgatagtct--atggcagaaggaac-t--ttcagaagtaattaaagttagggaccttgagatagggaaattaccttggattatctggatgagcccaatgtcaccacaaggg i canFam3.chr16 C 0 I 13 s dasNov3.JH570353 1476890 178 - 2520184 ATGGGCCCTTGCTCGGGAGAACATCAGTCCCCTGCgatgtctaacgtcctcattcacagaacctgtgactctctcaccttacatgacaaacggcca-ttgttcaggt-tgaataaatttaaggaatttgcaggagggagactattcca--ggttaccggttggccccaggtaatcacgaggg i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e mm10.chr8 86632760 1397 - 129401213 I a score=95833.000000 s hg38.chr4_KI270789v1_alt 143854 10 + 205944 tccttaa----------------------------------------------------------agg s panTro5.chr4 192930943 10 + 194502333 tccttaa----------------------------------------------------------agg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814592 10 + 195804263 tccttaa----------------------------------------------------------agg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851868 10 + 4876863 tctttaa----------------------------------------------------------agg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742557 10 + 115148730 tccttaa----------------------------------------------------------agg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025368 10 + 190429646 tccttaa----------------------------------------------------------agg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968230 10 + 189454096 tccttaa----------------------------------------------------------agg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359859 10 - 25927173 tccttaa----------------------------------------------------------agg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389570 10 + 4669795 tccttaa----------------------------------------------------------agg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347164 10 + 135778131 tccttaa----------------------------------------------------------agg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803271 10 - 2847728 tccttaa----------------------------------------------------------agg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910255 10 + 2368649 tccttaa----------------------------------------------------------agg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645333 10 - 190850796 cccttaa----------------------------------------------------------agg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134509 10 - 14256875 tccttaa----------------------------------------------------------agg i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 1612349 10 + 5030052 tccttaa----------------------------------------------------------agg i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11264630 10 - 11315646 tccttaa----------------------------------------------------------aag i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634157 10 - 129401213 TTCATAA----------------------------------------------------------ACa i mm10.chr8 I 1397 C 0 s canFam3.chr16 16981120 68 - 59632846 tttttaatttttttacttatttatgatagtcacagtgagagagagagaggcagagacataggcagagg i canFam3.chr16 I 13 I 125 s dasNov3.JH570353 1477068 10 - 2520184 tctttaa----------------------------------------------------------aag i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I a score=1163359.000000 s hg38.chr4_KI270789v1_alt 143864 114 + 205944 tataag-aaggagtcagaggacagagtcagaaggagacgtgctgatgtgagaatggtcagagag--atacaaccttcctgtctttgaagatggaggaaaggggccttgagccaagga s panTro5.chr4 192930953 114 + 194502333 tataag-aaggagtcagaggacagagtcagaaggagacgtgctgatgtgagaatggtcagagag--atacaaccttcctgtctttgaagatggaggaaaggggccttgagccaagga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814602 114 + 195804263 tataag-aaggagtcagaggacagagtcagaaggagacgtgctgatgtgagaatggtcagagag--atacaaccttcctgtctttgaagatggaggaaaggggccttgagccaagga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851878 114 + 4876863 tataag-aaggagtcagaggacagagtcagaaggagacgtgctgatgtgagaatggtcagagag--atacaatgttcctgtctttgaagatggaggaaaggggcattgagccaagga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742567 113 + 115148730 tgtaag-aaggagtcagaggacagagtcagaaggagacgtgctgatgtgagaatga-cagagag--atacaacgttcctgtctttgaagatggaggaaagaggccttgagccaagga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025378 114 + 190429646 tatgag-aaggaatcagagtacagagtcagaaggaaacatgctgatgtgagaatggtcagagag--atacaacagtcctgactttaaagatagaggaaaggggccttgagccaagga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968240 114 + 189454096 tatgag-aaggaatcagagtacagagtcagaaggaaacatgctgatgtgagaatggtcagagag--atacaacagtcctgactttaaagatagaggaaaggggccttgagccaagga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359869 114 - 25927173 tatgag-aaggaatcagagtacagagtcagaaggaaatgtgctgatgtgagaatggtcagagag--agacaacagtcctgactttaaagatagaggaaaggggccttgagccaagga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389580 114 + 4669795 tatgag-aaggaatcagagtacagagtcagaaggaaacgtgctgatgtgagaatggtcagagag--atacaacagtcctgactttgaagatggaggaaaggggccttgagccaagga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347174 114 + 135778131 tacggg-aaggaatcagagtacagagtcagaaggaaacgtgctgatgtgagaatggtcagacag--atacaacagtcctgactttgaagatagaggaaaggggtcttgagccaagga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803281 114 - 2847728 tatgag-aaggaatcagagtacagagtcagaaggaaacgtgctgatgtgagaatggtcagagag--atacaacagtcctgactttgaagatggaggaaaggggccttgagccaagga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910265 114 + 2368649 tatgag-aaggaatcagagtacagagtcagaaggaaacgtgctgatgtgagaatggtcagagag--atacaacggtcctgtttttgaagatggaggaaaggggccttgagccaagga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645343 114 - 190850796 catagg-gaggaagcagaacacagagtcaggaggagatggggtgatgtgagaatggtcagggag--atacgctgttcctgtctttgaagatggaagaaaggggccttgagcccagga i calJac3.chr3 C 0 I 13 s saiBol1.JH378165 13134519 112 - 14256875 tatagg-aaggaagcagcagac--agtcagaaggagatggggtgatgtgagaatggtcagagag--atgcaacattcctgtcattgaagacggaagaaaggggccttgagcccagga i saiBol1.JH378165 C 0 I 13 s aotNan1.NW_018492112v1 1612359 114 + 5030052 tgtagg-aaggaagcagaagacagagtcagaaggagatggggtgatgtgagaatggtcagagag--atacaatgttcttgtctttgaagatggaaaaaaggggccttgagcccagga i aotNan1.NW_018492112v1 C 0 n 0 s otoGar3.GL873580 11264640 113 - 11315646 ga-aag-aaggaagcagaagacagaatcagagggaggagtggctgcatgagaagggtcattaag--acccagtcttctggttttgaaccatgggaggcaggagccatcagccaagga i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634167 110 - 129401213 taaaagaaaggggacaaaatacagactgagggcgaagta-actgac-taaaaattgtcagagaaatatataacatcactttctaagaaaatgg-----aggggccaaaatctcagga i mm10.chr8 C 0 C 0 s canFam3.chr16 16981313 113 - 59632846 tataag-aaggaggcagag-acagagtcagagggaaatgtggccacttgagaatggctagagag--ttacaatgttggtggcttttaagatggaaaaacagtgccagaagccaagga i canFam3.chr16 I 125 C 0 s dasNov3.JH570353 1477078 111 - 2520184 ---tgg-aagaggtcagaaggcagagtccaaaggagatgcgactatggaaagaccaccaggcac--ctgccacgctgctgactttggagatagaggatggaggctcctagcccagga i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I a score=1162904.000000 s hg38.chr4_KI270789v1_alt 143978 154 + 205944 ttgttgttggcctttagaaactggaaaatgcaagaaaatcaag-tctcc-ct-aaagcccctagaagggaacacagtccaactaattcatttattttagcccag-gagatccctgttgggcttccgacttacagtact-ggaagat-aatacattcctgg s panTro5.chr4 192931067 154 + 194502333 ttgttgttggccttcagaaactggaaaatgcaagaaaatcaag-tctcc-ct-aaagcccctagaagggaacacagtccaactaattcatttattttagcccag-gagatccctgttgggcttccgacttacagtact-ggaagat-aatacattcctgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814716 153 + 195804263 ttgttgttggccttcagaaactggaaaatgcaagaaaatcaag-tctcc-ct-aaagcccctagaagggaacacagtccaactaattcatttattttagcccag-gagatccctgttgggcttccgacttaca-tact-ggaagat-aatccattcctgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3851992 155 + 4876863 tcattgctggccttcagaaactggaaaacacaagaaaatcaag-tctcc-ct-aaagcccctggaagggaacacagtccaactaattcatttattttagcccag-gagatccctgttgggcttccgacttacagtactgggaagat-aatacattcccgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742680 153 + 115148730 acgttgttggcctccagaaactggaaaatgcaagaaagtcgac-ccatc-ct-aaagcccctagaagggaacacagtccaactaattca-ttattttagcccag-gagatccttgttgggcttccgacttacagtact-ggaagat-aatatattcctgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025492 151 + 190429646 tcactgttggccttcagaaac---aaaatgcaagaaaattgac-tctcc-ct-aaagcccctcgaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtact-ggaagat-aacacatttctgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968354 151 + 189454096 tcactgttggccttcagaaac---aaaatgcaagaaaattgac-tctcc-ct-aaagcccctcgaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtact-ggaagat-aacacatttctgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24359983 151 - 25927173 tcactgttggccttcagaaac---aaaatgcaagaaaattgac-tctcc-ct-aaagcccctcgaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtact-ggaagat-aacacatttctgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389694 151 + 4669795 tcattgttggccttcagaaac---aaaatgcaagaaaattgac-tgtcc-ct-aaagcccctcgaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtact-ggaagat-aacacatttctgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347288 153 + 135778131 tcgttgttggccttcagaaact-gaaaatgcaagaaaattgac-tctcc-ct-aaagcccctagaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttatagtact-ggaagat-aacacatttctgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803395 151 - 2847728 tcattgttggccttcagaaac---aaaatgcaagaaaattgac-tctcc-ct-aaagcccctcgaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtact-ggaagat-aacacatttctgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910379 153 + 2368649 tcattgttggccttcagaaact-gaaaatgcaagaaaactgac-tctcc-ct-aaagtccctagaagggaacacagtccaactaattcatttatgttagcccag-gagatccttgctgggcttccgacttacagtacg-ggaagat-aacacatttccgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645470 143 - 190850796 ccaatgttggccttcag-------aaaatgcaagaaaatcgac-tttcc-at-aaagcccctagaagggaacacagtccaactaattcatttattttagctcaa-gagattc---ctgggcttccgccttagagtact-gggagat-agtgaattgtgt- i calJac3.chr3 I 13 C 0 s saiBol1.JH378165 13134644 144 - 14256875 ccaatgttggccttcag-------aaaatgcaagaaaatcgac-tctcc-gt-aaagcccctagaagagaacacagtccaactaattcatttattttagctcaa-gagattcttgttgggcttctgacttacagt--t-gggagat-aataaattttgt- i saiBol1.JH378165 I 13 C 0 s otoGar3.GL873580 11264753 120 - 11315646 atactggtggcttccaggaactggaaaatgcaagcaaatgacc-tcttc-ctgagaacctctggaagagaacacagcccaattaactccctga------cacag-gaga-------------------gtatggtact-ag-----------ctttttgt i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634277 144 - 129401213 atgctggcagcctagagagaagtggaaa-gcagagacacagatatggcg-cc-atagccttttgaaga-aactcagcccagttcactc--------tagcatag-ggaatggttcttggactt-taacttacagaact-gtaacat-actacatttttgt i mm10.chr8 C 0 C 0 s canFam3.chr16 16981426 152 - 59632846 atgatggtggcctctaaaagctg-gaaatacagagaaat--ac-tctccgct-ggagtctccagggagggatacagcccaactaacatgctgattttagcccagtgaggtccttgct-gacttctaacttacagaact-ataagat-cataaattttcat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477189 139 - 2520184 gaaggagcagcccctgg-acctggaaacggcaaggaaatggat-tttcc-tt-cgagcccccggaaacaaacacagcctcggcg----------ttcagcacagcgagaccc--gtcaacctcctaactcacagagct-gtgagataaattcactt---- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I e aotNan1.NW_018492112v1 1612473 0 + 5030052 I a score=1136916.000000 s hg38.chr4_KI270789v1_alt 144132 115 + 205944 tggtttgtgtcacaaggtctgtagtactttgttccagtatcagtagaaaacCGGTAG-AAGGGGAATTCACGTAAATATCATTACACACAGAAATAATTACTTATTATTCTTTTGT s panTro5.chr4 192931221 115 + 194502333 tggtttgtgtcacaaggtctgtagtactttgttccagtatcagtagaaaaccagtaG-AAGGGGAATTCACGTAAATATCATTACACACAGAAATAATTACTTATTATTCTTTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814869 115 + 195804263 tggtttgtgtcacaaggtctgtagtactttgttccagtatcagtagaaaaccagtaG-AAGGGGAATTCACGTAAATATCATTACACACAGAAATAATTACTTATTATTCTTTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852147 115 + 4876863 tggtttgtgtcacaaggtctgtagtactttgttccagtatcagtagaaaacCGGTAG-AAGGGGAATTCACATAAATATCATTAAACACAGAAATAATTACTTATTATTCTTTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742833 112 + 115148730 tggtttgtgtcacgagctctgtagtactttgttccagtatcagtagaaaacCGGTAG-AAGGGGAATTCACGTAAATATCATTACAAACAGAAATAATTGCTTATTATTCTT---T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025643 114 + 190429646 tggtttgtgtcacgaggtctgtagtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTACTGTTCTTCTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968505 114 + 189454096 tggtttgtgtcacgaggtctgtagtactttgttccagtattagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTACTGTTCTTCTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360134 114 - 25927173 tggtttgtgtcacgaggtctgtagtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTACTGTTCTTCTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389845 114 + 4669795 tggtttgtgtcacgaggtctgtagtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAGACAGGAATAATTACTTACTGTTCTTCTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347441 114 + 135778131 tggtttgtgtcacgaggtctgtagtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTACTATCCTTCTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803546 114 - 2847728 tggtttgtgtcacgaggtctgtagtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTACTGTTCTTCTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910532 114 + 2368649 tggtttgtgtcacaagatctgtggtactttgttccagtatcagtagaaaacCGGTAA-AAGGGGAATTCACAT-AATATCATTACAAACAGGAATAATTACTTAGTATTCTTCTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645613 114 - 190850796 tggcttgtgtcacaaagtccattgtgattggttccagcatcagtagaaaacCGACAG-AAGAGCCATTCACATAAATATCA-AACAAACAGAAATAATTACTTCTTATTCTTTCGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134788 115 - 14256875 tggcttgtgtcacgaaggccactgtcatttgttccagtaccagtagaaaactgataG-AAGGGCCATTCATGTAAAGATTGTTACAAACAGAAATAATTATTTCTTAATCTTTTGT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3419938 115 - 5030052 TGGCTTGTGTCACAAAGTCCATTGTAATTTGTTCCAGCATCAGTAGAAAACCAATAG-AAGAGCCATTCACGCAAATATCATTACAAACAAAAATAATTACTTCTTGTTCTTTTGT i aotNan1.NW_018492112v1 I 3053 C 0 s otoGar3.GL873580 11264873 116 - 11315646 tagtttgagtctttaagtttgtaggaacttattacagcagttatagaaaactGAAAGCAAGGACCATTCACATAAATACCTTTGCAGACTGAAATAATTATTTATTACACCTTTGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634421 112 - 129401213 caacttgaaccaccacatttatagtaattt-ttatgatagcaatagaaaGTGGAC---AAGGACTATTAACCTAAATATCATTCCATCTAGGAAAGGGCCTTTACTGTTCTTTTAG i mm10.chr8 C 0 C 0 s canFam3.chr16 16981578 114 - 59632846 tggtttgagccacca-gtttgtggtaatttgttatggtagcaatagaaaactgataG-AGGGACCATTCATGTAAATCTAATTATGTACAGGAATAATTATGTATTCCTCTTTTGC i canFam3.chr16 C 0 I 7 s dasNov3.JH570353 1477328 115 - 2520184 tgctcgaagcagccaagtttgctgtgatttgtcacagcagccgtgggaagccagcac-aGGGGCTGCTCACAGGATCATCACTGCAAACAGGAATAATGACTTACTGCTTTTCTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1024833 440 - 2196201 I e micMur3.chr14 17528116 501 - 93316391 I a score=424285.000000 s hg38.chr4_KI270789v1_alt 144247 43 + 205944 TCTCAAATCCTACCTGGTAAACAAAATGA-ATTTTTGTTTTTCG s panTro5.chr4 192931336 43 + 194502333 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192814984 43 + 195804263 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852262 43 + 4876863 TCTCAAATCCTACGTTGTAAACAAAATGA-ATTTTTGTTTTTCG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742945 43 + 115148730 TCTCAAATCCTACCTTGGAAACAAAATCA-ATTTTTGTTTTTCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025757 43 + 190429646 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968619 43 + 189454096 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360248 43 - 25927173 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3389959 43 + 4669795 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347555 43 + 135778131 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTATTTTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803660 43 - 2847728 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910646 43 + 2368649 TCTCAAATCCTACCTTGTAAACAAAATGA-ATTTTTGTTTTTCG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645727 40 - 190850796 TCTCAAATCTTGACTTGTAAACAAAACGG-ATTGT--GTTTTC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134903 37 - 14256875 TCTCAAAT-----CTTGTAAACAAAATGA-ATTTTTGTTTTTC- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025273 43 - 2196201 tctcAAATCTTAACTTGCAAACAAAATGA-ATTTTTGTTTTTCG i cebCap1.NW_016107886v1 I 440 C 0 s aotNan1.NW_018492112v1 3420053 43 - 5030052 TCTCAAATCTTAACTTGTAAACAAAATGA-ATTTTTGTTCCTCG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11264989 36 - 11315646 ACTCAAATCTTACT-------CCTAGTGA-ATTTTTGTTTGTTT i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86634533 34 - 129401213 -------TCTCATCTCCTAAACAAAATG--ACTGTGGTTTTTC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16981699 33 - 59632846 TCTTACTTCTAAACTTCTCAACACATT----TTTTTA------- i canFam3.chr16 I 7 C 0 s dasNov3.JH570353 1477443 43 - 2520184 ACTCAAATCTT-CCTCTTAAACAAAAACACATTTTGGCGTTTCA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528116 501 - 93316391 I a score=325921.000000 s hg38.chr4_KI270789v1_alt 144290 28 + 205944 GGGCTTTTGTAC----TAATTCTTATGAATCC s panTro5.chr4 192931379 28 + 194502333 GGGCTTTTGTAC----TAATTCTTATGAATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815027 28 + 195804263 GGGCTTTTGTAC----TAATTCTTATGAATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852305 28 + 4876863 GGGCTTTTGTAC----TAATTCTTATGAATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112742988 28 + 115148730 GGGCTTTTGTAC----TAATTCTTATGAATCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025800 28 + 190429646 GGGCTTTTGTGA----TAATTCTTATGAATCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968662 28 + 189454096 GGGCTTTTGTGA----TAATTCTTATGAATCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360291 28 - 25927173 GGGCTTTTGTGA----TAATTCTTATGAATCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390002 28 + 4669795 GGGCTTTTGTGA----TAATTCTTATGAATCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347598 28 + 135778131 GGGCTTTTGTGA----TAATTCTTATGAATCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803703 28 - 2847728 GGGCTTTTGTGA----TAATTCTTATGAATCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910689 28 + 2368649 GGGCTTTTGTGA----TAATTCTTATGAATCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645767 13 - 190850796 GGGCTTTTGTAG----T--------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134940 28 - 14256875 GGGGTTTTGGAG----TCTTTCTTATGAATTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025316 28 - 2196201 GGGCTCTTGTGG----CAGTTCTTACGAATTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420096 28 - 5030052 GGGCTTTTGCGG----TAATTCTTAGGAATTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17528617 28 - 93316391 GGGCTATTGTAC----TAATTCTTATGAATCC i micMur3.chr14 I 501 I 185 s otoGar3.GL873580 11265029 28 - 11315646 GGACCATTGTAC----TCATTGCTATGAATTC i otoGar3.GL873580 I 4 I 28 s mm10.chr8 86634567 28 - 129401213 AACCTATTATAT----TAAGTCACATAAATTC i mm10.chr8 C 0 C 0 s canFam3.chr16 16981732 28 - 59632846 GGGCTATTGTAC----TAATTCTCATACACTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477486 32 - 2520184 GAGCACCTGTGCAGATTCATTCCCATAAATTT i dasNov3.JH570353 C 0 C 0 a score=1260511.000000 s hg38.chr4_KI270789v1_alt 144318 129 + 205944 ACTGATATTTTGTTTT-TTCTGTCGTCTCCCTCAGGAACCCGA--AAGGAAGAAGC-TATACGACTGGGGA------CACATGTCTTAGAAGCACA-CTCATTAGATA----AA-GTGTCGCATACTCTT-TGATAAGGTAAGGCT s panTro5.chr4 192931407 130 + 194502333 ACTGATATTTTGTTTT-TTCTGTTGTCTCCCTCAGGAACCCGA--AAGGAAGAAGCCTATACGACTGGGGA------CACATGTCTTAGAAGCACA-CCCATGAGGTA----AA-GTGTCGCATACTCTT-TGATAAGGTAAGGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815055 130 + 195804263 ACTGATATTTTGTTTT-TTCTGTTGTCTCCCTCAGGAACCCGA--AAGGAAGAAGCCTATACGACTGGGGA------CACATGTCTTAGAAGCACA-CCCATGAGGTA----AA-GTGTCGCATACTCTT-TGATAAGGTAAGGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852333 130 + 4876863 ACTAATATTTTGTTTT-TTCTGTTGTCTCCCTCAGGACCCCGA--AAGGAAGAAGCCTATACGACTGGGGA------CACATGTCTTAGAAGCACA-CCCATTAGATA----AA-GTGTCGCATACTCTT-TGATAAGGTAAGGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743016 131 + 115148730 ACTAATATTTTGTTTT-TTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGAAGCCTGTACGTCTGGGGA------CACATATCCTAGAAGCACACCCCATTAGATA----AA-GTGTTGCATACTCTT-TGATAAGGTAAGGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025828 132 + 190429646 ACTAATATTTTGTTGTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCGTGTACGACTGGGGA------CACGTTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGTATACTCTT-TGATAAAGTAAGGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968690 132 + 189454096 ACTAATATTTTGTTGTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCGTGTACGACTGGGGA------CACGTTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGTATACTCTT-TGATAAAGTAAGGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360319 132 - 25927173 ACTAATATTTTGTTGTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCGTGTACGACTGGGGA------CACGTTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGTATACTCTT-TGATAAAGTAAGGCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390030 132 + 4669795 ACTAATATTTTGTTTTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCATGTACGACTGGGGA------CACGTTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGTATACTCTT-TGATAAAGTAAGGCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347626 132 + 135778131 ACTAATATTTTGTTTTCTTCTGTTGTCTCCCTCAGGTACCTGA--AAGGAAGTAGCGTGTATGACTGGGGA------CACATTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGCACATTCTT-TGATAAAGTAAGGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803731 131 - 2847728 ACTAATATTTTGTTTTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCGTGTACGACTGGGGA------CACGTTTCCTGGAAGCACA-CCCATTAGATA----AA-GTGTCTTATACTCTT-TGATAAAGTAAGGCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910717 132 + 2368649 ACTAATATTTTGTTTTCTTCTGTTGTCTCCCTCAGGAACCTGA--AAGGAAGTAGCATGTACGATTGGGGA------CACATTTCCTGGAAGCACACCCCATTAGATA----AA-GTGTCGCCTACTCTT-TGATAAAGTAAGGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645780 104 - 190850796 --------------------------CTCCCTCAGGAATCTGA--AAGGAAGAAACGTGAATGATCTGGG--------ACACGTCCTAGAAACACAACCCATTAGATG----AA-GTGTCGCAGACTCTT-TGAGAAAGTAAGGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13134968 129 - 14256875 ACTAATACTTTGCTGT-TTTCGTTACCTCTCTCAGGAATCTGA--AAGGAAGAAGCATCTATGATTTGGGA------CACACGTCCTTGAAGCACAACCCACTAGATG----AA-GTGTCGCAGACTCTC---ACAAAGTAAGGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025344 128 - 2196201 ACTGATATTTTGTCGT-TTTCATTGTCTCCCTCAGGAATCTGA--ATGGAAGAAGCATCTGTGATTTGGGA------CACAGGTCCTAGAAGCACAGCCCATTAGATG----AA-GTGCCACAGAC-CTG---ACAAATTAAGGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420124 131 - 5030052 ACTAATGTTTTGTTGT-TTTCGTTGTCTCCCTCGGGAATCTGA--AAGGAAGAAGTGTATGTGATTTGGGA------CACATGTCCTAGAAGCACAACCCATTAGATG----AA-GTGTTGCAGACTCTT-TGACAAAGTAAGGCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11265085 140 - 11315646 TTTGTTTGTTTGTTTTTCCTTGCTACCTCCCTCAGGAATCTTAATAAAAAAGAAGAGTATGTGATTTAGGACAAGGGCACACATCCTATGAGAACCACCTATCAGACA----AG-GTACTACGTACCTTC-TGATTAAATGAGATT i otoGar3.GL873580 I 28 I 335 s mm10.chr8 86634595 122 - 129401213 ATTAATTT---------TTTTCTTACCAACCTGAGGATTATGA--AAAGAATA---GCATATGATT-AGAA------CACACATTATCAGTGGCCACCCTGTCACAGAAGACAA-AAAAAGAATACATTT-TG-TAAATTGAAGTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16981760 128 - 59632846 ATTAATATTTTTT----TCCCGTTACCTCTCTTAGGAATCTGG--AAAGAAGAATACTATGTGATTTGAAA------CACGTATCCTAAATGCACAACCCATAAGGTA----AA-GTGCTAAATACTTTT-TGATAAAGTAAAGCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477518 125 - 2520184 -------GTCCGTGATTTCTTCCTAAGTCCCTTGGAAATATGA--AAAGAAGAA--TGACATGATGTGGGA------CACACATCCCAAATGTACAACCCATTGGGTA----AATGCGCTAAATACTTTTTTGATAAATTAAAGCT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528645 185 - 93316391 I a score=562302.000000 s hg38.chr4_KI270789v1_alt 144447 50 + 205944 CCCTGGACGAGATGTTTTACAGGTACCATGAGCTCAGT-GAATTGCTTTTG s panTro5.chr4 192931537 50 + 194502333 CCCTGGACGAGATGTTCTACAGGTACCATGAGCTCAGT-GAAATGCTTTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815185 50 + 195804263 CCCTGGACGAGATGTTCTACAGGTACCATGAGCTCAGT-GAAATGCTTTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852463 50 + 4876863 CCCTGGACGAGATGTTTTACAGGTACCATGAGCTCAGT-GAAATGCTTTCG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743147 50 + 115148730 CCCTGGACGAGATGTTTTACAGGTCCCATGAGCTCAGT-GAAACGCTTTCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189025960 49 + 190429646 -CCTGGACGAGATGTTTTACGGGTACCCTGAGCTCAGT-GAAATGCTTTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968822 49 + 189454096 -CCTGGACGAGATGTTTTACGGGTACCCTGAGCTCAGT-GAAATGCTTTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360451 49 - 25927173 -CCTGGACGAGATGTTTTACGGGTACCCTGAGCTCAGT-GAAATGCTTTCG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390162 49 + 4669795 -CCTGGACGAGATGTTTTACAGGTACCCTGAGCTCAGT-GAAATGCTTTCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347758 49 + 135778131 -CCTGGACGAGATGTTTTACAGGTACCCTGAGCTCAGT-GAAATGCTTACG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803862 49 - 2847728 -CCTGGACGAGATGTTTTACAGGTACCCTGAGCTCAGT-GAAATGCTTTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910849 49 + 2368649 -CCCGGACGAGATGTTTTACAGGAACCATGAGCTCAGT-GAAATGCTTTCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645884 50 - 190850796 CCGTGGATGAGATGTGTTACAGGTACAACGAGCTCAAT-GAAATGCTCTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13135097 50 - 14256875 CCGTGGACAAGATGTTTGGCAGGTACAATGAGCTCACT-GAAATGCTCTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025472 50 - 2196201 CCGCGGACGAGATGTTTTACAGGTACAATGAGCTCACT-GAGATGCTCTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420255 50 - 5030052 CCGTGGACGAGGTGTTTTACAGGTACAATGAGCTCAAT-GAAATGCTCTCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11265560 48 - 11315646 ccCCAAATGAAGTATTTTATAGGGA---TGAACTAAATCAAAATGCTCTCT i otoGar3.GL873580 I 335 C 0 s mm10.chr8 86634717 37 - 129401213 -ACTGGAGGAAATATTTTGTAAGTGCAATGAACCAAGT------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16981888 50 - 59632846 GTCTGGATGAAATGTTTTACAGGTAATATGAGCTATAT-GAAATGCTCTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477643 50 - 2520184 GGCTGGCAAAAATGATTTACAGGTACATCGAGCTGAAT-GAAATGTTCTCT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17528645 185 - 93316391 I a score=4124599.000000 s hg38.chr4_KI270789v1_alt 144497 279 + 205944 GAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAGTTTCAGATGTCTCACTCTG-CCTATGACTGTA s panTro5.chr4 192931587 279 + 194502333 GAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAGTTTCAGATGTCTCACTCTG-CCTATGACTCTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815235 279 + 195804263 GAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAGTTTCAGATGTCTCACTCTG-CCTATGACTCTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852513 277 + 4876863 GAAAGACACTCAGTGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT--GCAAATGTTTACACATCAGTAATG-AAAAA-ATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAGTTTCAGATGTCTCACTCTG-CCTATGACTGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743197 279 + 115148730 GAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGGTTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTGTGATTTCAGATGTCTCACTCTG-CCTGTGACTGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026009 279 + 190429646 GAAAGACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187968871 279 + 189454096 GAAAGACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360500 279 - 25927173 GAAAGACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCAATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390211 279 + 4669795 GAAAGACACTCAACAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134347807 279 + 135778131 GAAACACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2803911 279 - 2847728 GAAAGACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCGTAACTTC-GGCAAATGTTTACACATCAGTAATG-AAAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACATTGACTATTTTTCCTGACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 910898 279 + 2368649 GAAAGACACTCAGCAGAGTGGGCACCACAAGGTTAGGAGAAGCAGCTTCTGCTCGTCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AGAAATATTCTCTTGGCGATTTCAGGCTTGTTACTATGGATGTTGTTTGCTAACACTGACTATTTTTCCTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAGAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCTACAATTTCAGATGTCTCACTCTG-CCTATGACTGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189645934 276 - 190850796 GAAAGACACTCAGCAGAGTGGGCACCATGAGGTTAGGAGAAGCAGCTTCTGCTCATCATGACTTT-GGCAAATGTTTACACATCAGTAGTGAAAAAAAATTCCCTTGGTGATTTCAGGCTGGTTACTGTGGATGTTGTTTGCTAACATTGACTATTTTTCTTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGGAAC-----TATTTCAGACA-----TTTCCACGATTTCAGATGTCTCACTCTG-CCTATGAC---- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13135147 279 - 14256875 GAAAGACACTCAGCAGAGTGGGCACCACGAGGTTAGGGGGAGCAGCTTCCGCTCATCACAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATACTCCCTTGGTGATTTCAGGCTTGTTACTAGGGCCGTTGTTTGCTAACATTGACTATTTTTCTTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCCATGATTTCAGATGTCTCACTCTG-CCTAGGACTCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025522 279 - 2196201 GAAAGACACTCAGCAGAGTGGCCACCACGAGGTTAGGGGAAGCAGCTTCCGCTCATCATAACTCT-GGCAAATGTTTACACATCAGTAATG-AAAAATACTCCCTTGGTGATTTCAGGCTTGTTACTGTGGACGTTGTTTGCTAACATTGACTATTTTTCTTAACTGCTTATAGACACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTCGTTTTGGGCCAGCAAC-----TATTTCAGACA-----CTCCCATGATTTCAGATGTCTCACTCTG-CCTAGGACTGTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420305 279 - 5030052 GAAAGACACTCAGCAGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCATCATAACTTT-GGCAAATGTTTACACATCAGTAATG-AAAAATACTCCCTTGGTGATTTCAGGCTTGTTACTGTGGACGTTGTTTGCTAACATTGACTATTTTTCTTAACTGCTTATAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAGCAAC-----TATTTCAGACA-----TTTCCACGATTTCGGATGTCTCACTCTG-CCTATGACTGTA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17528830 283 - 93316391 GAAAGACACTCAGGAGAGTGGGCACCACTAGATTAGGAGGAGCAGCTTCTGCTAATCATAACTTCTAGCAAATGTTTACACACCAATAATG-GAAAATATCCTCTTCCAGATTTCAGACTTGTTACTGTGGATGTTGCTTGCTAACATTGACTATTTTTCCTAGCTGCTTATAGAAACTCCAGGCTGCCACCCATCTGCTCTCTCATC--AGTAGTGGTGGGCCAGCAACTATAATACATCAGACA-----TTTCTCCCATTTCAGATGTCTTACTCTG-CGTATAACTGTA i micMur3.chr14 I 185 I 2039 s otoGar3.GL873580 11265608 262 - 11315646 GAAAGAAACTCAGAAGAGTGGGCATCACTAGAC-----------ACTCCTGCTAAATCTAACTTTTGGCAAATGTTTACATACCAAAAATG-TAAAGTATCATCTTGCAGATTTCAGCCTTGTTACTGTGGATATTGTTTGGAAACATTGACTATTTTTCTTAGCTGCTTATAGAAGCTGTAGGCTGCCTCCCATCTGCTCTCTCATCAAAGAAGTTTTTGGCCAGCAGT-----TACTTCAGCCA-------TCTCCCATTTCTGATGTCTCACTCTGCCGTATG------ i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634754 219 - 129401213 --------------------------ACTAAATTATGAGAA---GACACCATTAATCATAACTTCTGGAAAATATTTATACATCATCAATA-TAAGTTA-----TAGGGGATTGCAGGCTTGTTAGTG----------------ACATCAACTATT-----TGGCTGCATATAGGAAATCCAGGATGCCACCCATCTGGTCTCTGAT-ATCGTAATTTGAGGCCAGCAAC-----TG----AGACA-----TTTCTCCAATTTCA-ATGTTTCATGCAG-AGCAGAACAATA i mm10.chr8 C 0 C 0 s canFam3.chr16 16981938 274 - 59632846 GGAAAACACTCTAGAGAGTGGGCACCGCCAGGTTAGAAGAA---GCTTCTGGTAATCAAAACT---GCTAAATGTTTACCCACCCGTAATG-GAAAATATCCTCTTGGGGATTTTCAACTTGTTACCATGGATGTTGTTTGCTAACACTGATTGTT-TTCCTAACTGCTTATAGAAACTCCATGCTGTCACCCATCTGTTCTCTCATCAAAGTAGCTTTGCAATGACAGT-----TATTTTAGACTTTTTTTTTTTATGATTTCAGATGTCT----CTG-CATTGAACTATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477693 271 - 2520184 -AAAAACTTTTTTGGG---GGGTACCGCCAGGTTAGAAGAAGCAGCT-CTGCTAATCATAACCTCAGGCAAACATTTACATACCAGTAAAG-AAAAATATCCTCTTGGGGATTTCAGTCTCGTTACCATGGATATTGTTTGCTGACATTGACTGTTTTCCCAAACTGCTTATAGAAACTCCATGCTGCCATCCATATGTTCCCTCATCAGAGTCGTGGTGGGCCAGCA-C-----GCTTTCGGGCA------TCCTACAGCTTCAGATGTCTCCCTCTG-C--ATGACCGCA i dasNov3.JH570353 C 0 C 0 a score=1551677.000000 s hg38.chr4_KI270789v1_alt 144776 153 + 205944 TGTTGTACTTGAGGACTGGACGCA----C--AGAG-T-AAAGTGCAAATAG-CAAGCATTCAGGTCCAACTCTCCTCCTTCTGGTTAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTttagttcaatgtagccattataaaatgtgtatatatttta s panTro5.chr4 192931866 153 + 194502333 TGTTGTACTTGAGGACTGGACGCA----C--AGAG-T-AAAGTGCAAATAG-CAAGCATTCAGGTCCAACTCTCTTCCTTCTGGTTAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTttagttcaatgtaggcattataaaatgtgtatatatttta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815514 153 + 195804263 TGTTGTACTTGAGGACTGGACGCA----C--AGAG-T-AAAGTGCAAATAG-CAAGCATTCAGGTCCAACTCTCTTCCTTCTGGTTAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTttagttcaatgtaggcattataaaatgtgtatatatttta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852790 152 + 4876863 TGTTGTACTTGAGGACTGGACGCA----C--AGAG-T-AAAGTGCAAATAG-CAAGCATTCAGGTCCAACTCTCCTCCCTGTGGTTAACAATAT-AAAGAAAGAGGTAGTATCGGAATTATTttagtttgatgtagccattataaaatgtgtatatatttta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743476 152 + 115148730 TGTTGTACTTGAGGACTGGACGCA----CGGAGAG-T-TCAGTGCAAATAGCCAAGCATTCAGCTCCAACTC---TCCTTGTGG-TAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTttagttcaatgtagccattataaaatgtgtatatatttta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026288 152 + 190429646 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTTTCGTTCAATACagccattgtaaaatgtgtgtatatttta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969150 152 + 189454096 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTTTCGTTCAATACagccattgtaaaatgtgtgtatatttta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360779 152 - 25927173 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTTTCATTCAATACagccattgtaaaatgtgtgtatatttta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390490 152 + 4669795 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTttagttcaatacagccattgtaaaatgtgtgtatatttta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348086 152 + 135778131 TGTTGTACTTGGGGACCGGACGCA----C--AGAG-T-TCCATGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTttagttcaatacagccattataaaatgtgtgtatatttta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804190 152 - 2847728 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTttagttcaatacagccattgtaaaatgtgtgtatatttta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911177 152 + 2368649 TGTTGTACTTGAGGACCGGACGCA----C--AGAG-T-TCCGTGCAAATAG-CAAGCATTCAGCTCCAACTCTCCTCCCTGTGG-TAACAATATGAAAGAAAGAGATAGTATCGGAATTATTttagttcaatacagccattataaaatgtgtgtatatttta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189646210 152 - 190850796 TGTTGTGCTTGAGAACTGGACGCA----C--AGAG-T-TTAGTGCAAAGAG-CAAACACTCAGCTCCAACTGTCCTCCTTGTGG-TAAAAATATGAAAGAAAGAGGTGGCCTTGGAATTATTTTAGTTGGATGTAGCCATTACAAAATGTGTATATATttta i calJac3.chr3 C 0 I 1634 s saiBol1.JH378165 13135426 151 - 14256875 TGTTGTGCTTGAGAACTGGATGCA-------AGAG-T-TTAGTGCAAATAG-TGAACATTCAGCTCCAACTGTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGGTAGTCTCGGAATTATTttactttgatgtagccattataaaatgtgtatatatttta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025801 152 - 2196201 TGTTGTGCTTGAGAACTGGACGCA----T--ACAA-T-TTAGTGCAAATAG-CAAACATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATATGAAAGAAAGAGGTAGTCTCGGAATTATTttagtttcatgtagccattataaaatgtctatatatttta i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420584 152 - 5030052 TGTTGTGCTTGAGAACTGGACGCA----T--AGAG-T-TTAGTGCAAATAG-CAAACATTCAGCTCCAACTCTCCTCCTTGTGG-TAACAATAGGAAAGAAAGAGGTAGTATCAGAATTATTttagtttgatgtagccattataaaatgtgtatatatttta i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11265870 125 - 11315646 -GTTGTACTTGATGAATGGATGTT----C--AGAGCT-TCAGTGCAAGTA--TAAACA--CATTTACAATTTTCTTGTCT-Tgg-taaca-------------------tatca----tatttttgctctatttagccattctaaaatttatacatatttct i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86634973 137 - 129401213 ------CATTTAGAATTGGTTAGATTGGC--AGAG-TCTCAATGCAGGTA--TAAACATTTAGCTCCAACCATTTCCC---TGG-CCACAGTAGAAGAGGA----------TATGAATAATTCTTTCTCAATTTAGTCATCCTGCAATGAATACAGATTTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16982212 113 - 59632846 CATTGTACTTGAGAACATGATGAT----C--AGAGCT-TCAATGTAGGTAG--AAACATACAGCTCCTACTTTTCTCCATTTAG-CAATACTACGAGAGAAAGCCATAGTATCTGAATTATTT--------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1477964 128 - 2520184 CATTGTCCTGGGGAATTTGATGCC----C--AGAA-CGTCAGTCAAGATAG---AACGTGCAA-TTGGACTTTGCTCATCTGAG-TAACTACAT-AGTGAGAGATTCGGTGTCTGAAGTGTTT---------------------ACAAGGATCTAAGTTCCA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I a score=1115400.000000 s hg38.chr4_KI270789v1_alt 144929 128 + 205944 aaacat---gtggtacatgataaatatatacaacttttatt--------tttcaat--aaaaaaTTAT--AAAAA--AAGTCATCAAACCTGATTTCTCATACTACTTTT-TTGGTAACACTCATCACACCAAAGACTTATTATTT s panTro5.chr4 192932019 131 + 194502333 aaacatcatgtggtacatgataaatatatacaacttttatt--------tttcaat--aaaaaaTTAT--TTAAA--AAGTCATCGAACCTGATTTCTCATACTACTTTT-TTGGTAACACTCATCACACCAAAGACTTATTATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815667 131 + 195804263 aaacatcatgtggtacatgataaatatatacaacttttatt--------tttcaat--aaaaaaTTAT--TAAAA--AAGTCATCGAACCTGATTTCTCATACTACTTTT-TTGGTAACACTCATCACACCAAAGACTTATTATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3852942 131 + 4876863 aaacatcatgtggtacatgataaatatatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAAA--AAGTCGTCAAACCTGATTTCTCCTACTAC-TTT-TTGGTAACACTCATCACACCAAAGACTTATTATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743628 132 + 115148730 aaacatcatgtggtacatgataaatatatacagcttttatt--------tttcaata-aaaaaaTTAT--AAAAA--AAGTCATCAAACCTGATTTCTCATACCACTTTT-TTGGTAACACTCATCACACCAAAGACTTATTATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026440 134 + 190429646 aaacatcatgtggtacatgataaatgtatacaacttttatt--------tttcagta-aaaaaaTTAT--AAAAAATATGTCATCAAATCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACACGAAAGACTTATTATCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969302 134 + 189454096 aaacatcatgtggtacatgataaatgtatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAAAATATGTCATCAAATCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACACGAAAGACTTATTATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24360931 134 - 25927173 aaacatcatgtggtacatgataaatgtatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAAAATATGTCATCAAATCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACACGAAAGACTTATTATCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390642 134 + 4669795 aaacatcatgtggtacatgataaatatatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAAAATATGTCATCAAACCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACATGAAAGACTTATTATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348238 134 + 135778131 aaacatcatgtggtacatgataaatatatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAATATATGTCATCAAATCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACACGAAAGACTTATTATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804342 134 - 2847728 aaacaccatgtggtacatgataaatatatacaacttttatt--------tttcaatc-aaaaaaTTAT--AAAAAATATGTCATCAAACCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACATGAAAGACTTATTATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911329 134 + 2368649 aaacatcatgtggtagatgataaatatatacaacttttatt--------tttcaata-aaaaaaTTAT--AAAAAATATGTCATCAAACCTGATTTCTCATATTACTTTT-TTGTTAACACTCATCACACGAAAGACTTATTATTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13135577 135 - 14256875 aaacaccaagtggtacatgatgaacatatacaactatgatt--------tgccagtt-aaaaaaTTAT--AAAAAATATGTCATCAAACCTGATTTCTCATACTTTTTTTCTTTGTAACACTCATCATACTAAAGACTTGTTATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1025953 134 - 2196201 aaacatcaagtggtacatgatgaatatatacaactattatt--------ttccagttaaaaaaaTTAT--AAAAAATATGTAATCAAACCTGATTTCTCATACTTTTTT--TTTGTAACACTCATCATACCAAAGACTTATTATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420736 137 - 5030052 aaacatcaagtggtacatgatgaatatacacgacttttatt--------ttccagtt-aaaaaaTTATAAAAAAAATATGTCATCAAACCTGATTTCTCATACTTTTTTTTTTTGTAACACTCATCATACCAAAGACTTATTATTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11265995 140 - 11315646 aaagcttttgttgtacataatgaata-atatgaattttgtcaataagaaaaTAAGTA-AATAAATTAG--AAAAAATATGTTATCAAACCTGATTTCTCATATTTCTTTT-TTG-TAACACTTATCATACCAAAGTCTTCTTATTt i otoGar3.GL873580 C 0 I 9889 s mm10.chr8 86635110 85 - 129401213 AAAAATTATGTGAAA--------------------ATTAAT--------GTTAAATA-AAATAAGTTT--GCAAA------------AGTTGATTACTCA----GCTTGT-AT-------------ATGTTGAAGATTTCTTATTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16982325 63 - 59632846 -----------------------------------------------------------AAAAATTGT--TAGAA-----------ACCTTGATTTCTC----------T-TTTTTAACACTTATCACACCAAAGGTTTCttattt i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1478092 71 - 2520184 -----------------------------------------------------------AATACTTGT--ATAAA----------AAGCCTGATTTCTTA---CTTTCTC-TTTGTGACACTTATAACACCAAAGATTCTTTATTT i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189646362 1634 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I a score=30496.000000 s hg38.chr4_KI270789v1_alt 145057 3 + 205944 TAA- s panTro5.chr4 192932150 3 + 194502333 TAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815798 3 + 195804263 TAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853073 3 + 4876863 TAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743760 3 + 115148730 TAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026574 3 + 190429646 TAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969436 3 + 189454096 TAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361065 3 - 25927173 TAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390776 3 + 4669795 TAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348372 3 + 135778131 TAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804476 3 - 2847728 TAA- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911463 3 + 2368649 TAA- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13135712 3 - 14256875 TAA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1026087 3 - 2196201 TAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3420873 3 - 5030052 TAA- i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86635195 3 - 129401213 TAA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16982388 2 - 59632846 -aa- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1478163 3 - 2520184 -AAA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189646362 1634 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=35127.000000 s hg38.chr4_KI270789v1_alt 145060 3 + 205944 AAT s panTro5.chr4 192932153 3 + 194502333 AAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815801 3 + 195804263 AAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853076 3 + 4876863 AAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743763 3 + 115148730 AAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026577 3 + 190429646 AAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969439 3 + 189454096 AAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361068 3 - 25927173 AAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390779 3 + 4669795 AAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348375 3 + 135778131 AAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804479 3 - 2847728 AAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911466 3 + 2368649 AAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189647996 2 - 190850796 aa- i calJac3.chr3 I 1634 C 0 s saiBol1.JH378165 13135715 3 - 14256875 AAT i saiBol1.JH378165 C 0 I 298 s cebCap1.NW_016107886v1 1026090 3 - 2196201 AAT i cebCap1.NW_016107886v1 C 0 I 304 s aotNan1.NW_018492112v1 3420876 3 - 5030052 AAT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86635198 3 - 129401213 AAT i mm10.chr8 C 0 C 0 s canFam3.chr16 16982391 2 - 59632846 -at i canFam3.chr16 I 1 I 1 s dasNov3.JH570353 1478166 3 - 2520184 AAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=114297.000000 s hg38.chr4_KI270789v1_alt 145063 10 + 205944 GTTATTTTTC s panTro5.chr4 192932156 10 + 194502333 GTTATTTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815804 10 + 195804263 GTTATTTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853079 9 + 4876863 GTTA-TTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743766 10 + 115148730 GTTATTTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026580 10 + 190429646 GTTATTTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969442 10 + 189454096 GTTATTTTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361071 10 - 25927173 GTTATTTTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390782 10 + 4669795 GTTATTTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348378 10 + 135778131 GTTATTTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804482 10 - 2847728 GTTATTTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911469 10 + 2368649 GTTATTTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189647998 10 - 190850796 Gttatttttc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13136016 10 - 14256875 Gttatttttc i saiBol1.JH378165 I 298 C 0 s cebCap1.NW_016107886v1 1026397 10 - 2196201 GTTATTTTTC i cebCap1.NW_016107886v1 I 304 C 0 s aotNan1.NW_018492112v1 3420879 10 - 5030052 GTTATTTTTC i aotNan1.NW_018492112v1 C 0 I 1061 s mm10.chr8 86635201 9 - 129401213 -ATATTCCTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16982394 10 - 59632846 tttattcttt i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1478169 10 - 2520184 TTTAGCCCTT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=4427462.000000 s hg38.chr4_KI270789v1_alt 145073 532 + 205944 ATAATTAATTTCTTATTAATTTTATAGGC----TAGATTTT-AATTGTTATGTCTAAATAGTAG--TGTCTGGTACGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAACGACATACTTCTCATCACTGTAACTTATTTTTGGTTTAGGACT--------------------------------------------------GATAA--AACATTTTTTCTCTCACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGATGCTAC---CATACCATTGTTCCAT---TCATCAACGCCAAATCATTCCTCGGGCCTGAGAGGAGCT--GCCATCCTTCACTTCGTCTTTGGGTCACTTCCAA---CCTCTG-TTCTCTGTGTGTCTCTTCTGGACTTCCTGGGAGAATAGCC---TCTCTCATGATA----ctcactttcttccacatcttcaatctctgcttcattgatagattatgctactcaatatag------------a----aacaacatcttttttattttttaatgataaacattctccccctcaatcttttaacctactaa-tgcaggcaatctaatctaaagaatagcctgcaatgcctc s panTro5.chr4 192932166 525 + 194502333 ATAATTAATTTCTTATTAATTTTATAGGC----TAGATTTT-AATTGTTATGTCTAAATAGTAG--TGTCTGGTACGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAACGACATACTTCTCATCACTGTAACTTATTTTTGGTTTAGGACT--------------------------------------------------GATAA--AACATTTTTTCTCTCACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGATGCTAC---CAT-----TGTTCCAT---TCATCAACGCCAAATCATTCCTCGGGCCTGAGAGGAGCT--GCCATCCTTCACTTCGTCTTTGGGTCACTTCCAA---CCTCTG-TTCTCTGTGTGTCTCTTCTGGACTTCCTGGGAGAATAGCC---TCTCTCATGATA----ctcactttcttccacatcttcaatctctgcttcattgatagattatgctactcaatatag------------a----aacaacatctttt--attttttaatgataaacattctccccctcaatcttttaacctactaa-tgcaggcaatctaatctaaagaatagcctgcaatgcctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192815814 525 + 195804263 ATAATTAATTTCTTATTAATTTTATAGGC----TAGATTTT-AATTGTTATGTCTAAATAGTAG--TGTCTGGTACGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAACGACATACTTCTCATCACTGTAACTTATTTTTGGTTTAGGACT--------------------------------------------------GATAA--AACATTTTTTCTCTCACCCCATATTGCTAAAGAT----CAAATCCTGCTTCTTTAAGATGCTAC---CAT-----TGTTCCAT---TCATCAACGCCAAATCATTCCTCGGGCCTGAGAGGAGCT--GCCATCCTTCACTTCGTCTTTGGGTCACTTCCAA---CCTCTG-TTCTCTGTGTGTCTCTTCTGGACTTCCTGGGAGAATAGCC---TCTCTCATGATA----ctcactttcttccacatcttcaatctctgcttcattgatagattatgctactcaatatag------------a----aacaacatctttt--attttttaatgataaacattctccccctcaatcttttaacctactaa-tgcaggcaatctaatctaaagaatagcctgcaatgcctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853088 508 + 4876863 ATAATTAATTTCTTATTAATTTTATAGGC----TAGATTTT-AATTGTTGTGTCTAAATAGTAG--TGTCTGGTACATGGTAGATAATCAATG-TGAC--A----AATAAA--------TGAATAAGTCTGTTAACGACATACTTCTCATCACTGTAACTTATTTTTGGTTTATGACT--------------------------------------------------GATAA--AACATTTTTTCT--------------CTAAAGAT----CAAATC---CTTCTTTAAGATGCTAC---CAT-----TGTTCCAT---TCATCAACGCCAAATCATTCCTTGGGCCTGAGAGGAGCT--GCCATCCTTCACTTCGTCTTTGGGTCACTTCCAA---CCTCTG-TTCTCTGTGTGTCTCATCTGGACTTCCTGGGAGAATAGCC---TCTCTCATGATA----ctcactttcttccacatcttcaatctctgcttcattgacagattatgctactcaatatag------------a----aacaacatcttttttattttttaatgataaacattctccccctcaatcttttaacctactaa-tgcgggcaatctaatctaaagaatagcctgcaatgcctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112743776 523 + 115148730 ATAATTAATTTCTCATTAA-TTTATAGGC----CAGATTTT-AATTGTTATGTCTAAATGGTAG--TGTCTAGTACGTGGTAGATAATCAATG-TGACTTG----AAGAAA--------TGAGTGAGTCTGTTAACGACATACTTCTCATCACTGTAACTTATTTTTGGTTTAGGACT--------------------------------------------------GATAA--AACATTTTTAGTCTCACTCCATATTGCTAAAGAT----TAAATCCTTCTTCTTTAAGATGCTAC---CAT-----TGTTCCAT---TCATCAACGCCAAATCATTCCTCAGGCCTGAGAGGAGCT--GCCA---TTCATTGCGTCTTTGGGTCACTTCCAA---CCCCTG-TTCTCTGTGTGTCTCATCTGGACTTCCTGGGAGAATAGCC---TCTCTCATGATA----ctcattttcttccacatcttcaatctctgcttcattgatagattatgctactcaatgtac------------a----aacaacatcttttttattttttaatgataaacattctccccctcaacattttaacctactaa-tgcgggcaatctaatctaaagaatagcctgtaatgcctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189026590 520 + 190429646 ATT----A-TTCTCATTAATTTTATAGGT----GAGATTTT-AACTGTTATGTCTAAATAGTAG--TGTCTAGTATGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTTATTTAAGACT--------------------------------------------------GATAA--AATATTTTTTCTTTTACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGAGGCTAC---CAT-----CGTTCCAT---TCATCAGCGCCAAATCACTCCTTGTGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-TTCTCTGCGTATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGGA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AACAACATCTTTTTTATTTTTTAACAATAAACATTTTCCCCCTCAACCTTTTAACCTACTAA-TGCGGGCAATCTAATCTAAAGAATAGCCTGCAAGACCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969452 520 + 189454096 ATT----A-TTCTCATTAATTTTATAGGT----GAGATTTT-AACTGTTATGTCTAAATAGTAG--TGTCTAGTATGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTTATTTAAGACT--------------------------------------------------GATAA--AATATTTTTTCTTTTACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGAGGCTAC---CAT-----CGTTCCAT---TCATCAGCGCCAAATCACTCCTTGTGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-TTCTCTGCGTATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AATAACATCTTTTTTATTTTTTAACAATAAACATTTTCCCCCTCAACCTTTTAACCTACTAA-TGCGGGCAATCTAATCTAAAGAATAGCCTGCAAGACCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361081 524 - 25927173 ATTATTAA-TTCTCATTAATTTTATAGGT----GAGATTTT-AACTGTTATGTCTAAATAGTAG--TGTCTAGTATGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTTATTTAAGACT--------------------------------------------------GATAA--AATATTTTTTCTTTTACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGAGGCTAC---CAT-----CGTTCCAT---TCATCAGCGCCAAATCACTCCTTGTGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-TTCTCTGCGTATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AACAACATCTTTTTTATTTTTTAACAATAAACATTTTCCCCCTCAACCTTTTAACCTACTAA-TGCGGGCAATCTAATCTAAAGAATAGCCTGCAAGACCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3390792 523 + 4669795 ATTATTAA-TTCTCATTAATTTTATAGGT----GAGATGTT-AACTGTTATGTCTAAATAGTAG--TGTC-AGTATGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAGTAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTGATTTAAGACT--------------------------------------------------GATAA--AACATTGTTTCTCTTACCCCATATTGCTAAAGAT----CAAATCCTTCTCCTTTAAGATGCTAC---CAT-----CATTCCAT---TCATCAGCGCCAAATCACTCCTCATGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-TTCTCTGCGTATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AACAACATCTTTTTTAGTTTTTAACGATAAACATTTTCCCCCTTAACCTTTTAACCTACAAA-TGCGGGCAATCTAATCTAAAGAATAGTCTGCAACACGTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348388 520 + 135778131 ATT----A-TTCTCATTAATTTTATAGGT----GAGATTTT-AACTGTTTTGTCTAAATAGTAG--TGTCTAGTACGTGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTGATTTAAGACT--------------------------------------------------GATAA--AACATTTTTTCTCTTACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTTAAGATGCTGC---CAT-----CGTTCCAT---TCATCAGCGCCAAATCACTCCTCATGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-CTCTCTGCATATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AACAACATCTTTTTTATTTTTTAACAATAAACATTTTCCCCCTCAACCTTTTAACCTACTAA-TGCGGGCAATCTAATCTAAAGAATAGCCTGCAAGACctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2804492 523 - 2847728 ATTATTAA-TTCTCATTAATTTTATAGGT----GAGATGTT-AACTGTTACGTCTAAATAGTAG--TGTC-AGTACATGGTAGATAATCAATG-TGACTTG----AATAAA--------TGAGTAAGTCTGTTAATGACATGCTTCTCATCACTGTAACTTATTTTTGATTTAAGACT--------------------------------------------------GATAA--AACATTGTTTCTCTTACCCCATATTGCTAAAGAT----CAAATCCTTCTCCTTTAAGATGCTAC---CAT-----CGTTCCAT---TCATCAGCGCCAAATCACTCCTCATGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAA---CC-CTG-TTCTCTGCGTATCTCATCTGGACTTCCT-GGAGAATAGCC---CCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTACTCAATATAG------------A----AACAACATCTTTTTTAGTTTTTAATGATAAACATTTTCCCCCTCAACCTTTTAACCTACAAA-TGCGGGCAATCTAATCTAAAGAATAGTCTGCAACACATC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 911479 571 + 2368649 ATTATTAA-TTCTCATTAATTTTATAGGT----GAGATTTT-AACTGTTATGTCTAAATAGTAG--TGTCTAGTATGTAGTAGATAATCAATG-TGACTTG----AATAAA--------TGAATAAGTCTGTTAATGATATGCTTCTCATCACTGTAACTTATTTTTGATTTAAGACTGATAAAACATTTTTTCTccacacttgatcttagccaaaaggccgagaagcgatAA--AACATTTTTTCTCTTACCCCATATTGCTGAAAAT----CAAATCCTT---CTTTAAGATGCTAC---CAT-----CGTTCCAT---TCATCGGTGCCAAATCACTCCTTGTGCCTGAGAGGAGCT--GCCATCCTTCACTTCGCCTTTGGGTCACTTCCAG---CC-CTG-TTCCCTGCATGTCTCACCTGGACTTCCT-GGAGAATAGCC---TCTCTCATGGTA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGATAGATTATGCTGCTCAATATAG------------A----AACAACATCTTTTTTATTTTTTAACGATCAATATTTTCCCCCTCAACCTTTTAACCTACTAA-TGCGGGCAATCTAATCTAAAGAATAGCCTGCAAGGCctc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189648008 502 - 190850796 atttttaatttatcattaattttataGGT----GAGATTTT-AATTGTTGTGTCTAAATAGCAG---ACATGGTACATGGTAGATCATTAA-G-TGATTTGAATGAATGAA--------TGAATAAGTCTGTTAATGACATACTTCTCATCACTGTCACTTAGTTTTACTTTAGGACT--------------------------------------------------GATGA--CACAGTTTTTCTCTTACCCC-TATTGCTAAAGAT----CAAATCCTTCTTCTTTACAAGGCTAC---CAT-----TCTTCCGTTCATCATCAATGCCAGATCATTCCTGGGGCCTCAGAGGAGCT--GCCATCCTTCCCTTCATCT----------------------TG-TTCTCTGTGTACCTCATCTGGACTTCCTGGGTGAATAGCC---TCTCTCATGATA----CTCACTTCCTTCCAAATCTGCAGTCTCTGCTTCACAGGTAGATTATGCTACTTGGTATAG------------A----AACAAGGTCTTTTTTATTTTTTCATGATAAA-AGTTTCCCCCTC--------AACCTACTAA-TGCAGGCACTCTAATC-AAAGAACAGCCTGCAATGCCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13136026 524 - 14256875 attattaatttatcattaattttataGGT----AAGATTTT-AGTTGTCATGTCTAATTAGTAG---ACATCGTACATGGTAGACCATCAA-G-CGATTTGAATCAATGAA--------TGAATAAGTCTGTTAATGACATACTTCTCATCACTGTCCCTTATTTTTAGTTTAGGACT--------------------------------------------------GATGA--AACATTTTTTCTCTTACCCCATATTGCTAAAGAT----CAAATCCTTCTTCTTCAGGAGGCTGC---CAA-----TCTTCCGTTCATCATCAACGCCAAATCATTCCTCAGGCCTCAGAGGAGCC--TCCATCCTCCACTGCGTCTTTGGGTCACTTGCAAAGTCC-ATG-TTCTCTGCGTACCTCATCTGGGCTTCCTGGGAGAATAGCC---TCTCTCATGAGA----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCGTAGGTAGATGATGCTACTCAATATAG------------A----AACAAGATCTTTTTTATTTTTTCGTGATAAA-ACTTTCCCCCTC--------AACCTACTAA-AGCAGGCACTCTAATC-ACATAATAGCCTGCAATGCCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1026407 518 - 2196201 ATTATTAATTTATCATTAATTTTATAGGT----GAGATTTT-AATTGTTATGTCTACATAGTAG---ACATGGTACATGGTAGATCATCAA-G-CGATTTGAATCAATGAA--------TGAATAAGTCTGTTAATGACTCA-TTCTCATGACTGTCACTTATTTTTAGTTTAGGACT--------------------------------------------------GATGA--AACATTTTTTCTCTTACCCCATATTGCTAAAGAT----CTAATCCCTCTTCTTTACGAGGCTAC---CAT-----TCTTCCGTTCATCATCAATGCCAAATCATTCCTCGGGCTACAGAGGAGCT--GCCATCCTTCACTTCGTCTTCGGGTCACTTGCAAAGTCC-ATG-TTCTCTGCGTACCTCATCTGGACTTCCTGGGAGAAGAGCC---TCTCTCATCATG----CTCACTTTCTTCCAAATCTTCAGTCTCTGCTTCATAGGTAGATGGTGCTACTCAGTATAG------------A----AACAAGATCTTTTTTATTTTTTCCTGATAAA-ACTT--CCCCTC--------AACCTACGAA-TGCAGGCACTCCAATC-AAAGAATAGC---CATTGCCTG i cebCap1.NW_016107886v1 C 0 C 0 s mm10.chr8 86635210 535 - 129401213 GCTTTTAATTTTTCATCAATGCTATATGT----GATTTTTTAAATTGATATATCTGAAGACTAGACAGTATACTACTTGGTAATTAGCGAATG-GCATCTG----AATGAA--------TGAAGA----TTTTAATGATATA--TGTTATTACTCTCACATGCTTTAGGTTGAAGACT--------------------------------------------------AATAATTACCACTGCTT-TCTTTCTCTGTATATCTGAATAT-------AGTCTTATCTCTCAAGACGTAAT---CAT-----TCTCTGAG---T-ACCAATGGCCAATTTTTCCTTTGTTTCAAAGAGATCTTGGTTTCTTTTCTTTTCAGCCTTTGGTCAATTCCAA---CT-CTGCTTCTCTGTGTCTTTCACCTTGCCTCCCTGCAAAACTTACCTCATCCCCCTTTATC----CTTATTTTTTACCAGACCTTCAATCCCTTTTTCATAAATAGATTCTGATACTAAGTGTAGAGTATAGAATATA----GACAAGAGCCGTTTT--TCTTTAGTTATAAG-ATATTCTACTGAAACCTCCATACTTAGCAA-TGCAGCCAATCTAATCTGAAGAAAAACCTACAATGTCTC i mm10.chr8 C 0 I 2667 s canFam3.chr16 16982404 508 - 59632846 ---attaattCCTC---TATCTTATAGGT----GACTTTTT-AACTACTACTTCCA------AG--CGGCTGGTACATGTTAGATTGTCAATG-AAAGTTG----CTTG--------------TAAATGTTTTAATGATATTCCTCTTATCATTGTCACTTATTTTAGTTTTAAAATT--------------------------------------------------GACAA--AACATTCATTCT-TTACCCTACACTGCTACATAGTTAGTTAATCTTTGTCCTTGAAGAGTCTACCTGCAT-----TCTTCTAC---ATGTCACTGCC-AATTGTTCCTCTGGCCTGAGAGAGATT--ACCATCCTTCCTTGCATTCTTGGATCAATCCCAA---CCCCTC-TACTCTGAATACTGCATTCTACCTCCTTGAGAAACTTGCC---TCATTCATTATAATAGCTTTCTTTTTTCCAAATTTTCAATCTTTCCTTCATTGCTAGATTATCCTACTCAATATAG------------A----AACCAGata------attttttaattaaaaaaattttGTCTCTCAGCTTTTTACCTAACCAATTATAAGCAAGCT-----GAAGAATAGCCTGTAATGCCTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1478179 452 - 2520184 ACTGTACA----CTGTCAACTTTGTAATTACTAAGGCTCTT-ATACATTGTACC--------AG--TGTCTGGTAC---------AATTCATGCTGCTTTG----AATGAATAAGTGACTGAATAAATGATTCAAGGAGATGCTCTTCATCATTACCACTTATTCTAGGTTTAAAACT--------------------------------------------------AATGA--AACATTTGTTCTCTCACTCCATGATGCTAAAGAA----TTAA-------------------------CGT------GTGTCCT---TTAGGAATGCCAAATTGTCCCTTAGCCCCACGAggagaa--accattcttcccccttcctt--ggctgatcccac---cacctg-tgctctggacagctcatctcacctcttaggaaaaattgcc---taacttgtgccc----tcccatctcttccaaatcttgaacctcttcctctttgatagatcattcTGCTCAAAGCAG------------AAAATAATCAAGTATTCCTAATTTTACAAT--------TTTTTCCCC----------AACTTGCCTA------------------AAGAAATGGTG----------- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1242737.000000 s hg38.chr4_KI270789v1_alt 145605 152 + 205944 ctttcatcatttcccatttaatccagctttctggctgagtaattttgcagaaagccctttctcccatgtcacagatggaactttgcagtggcctat-tctgataaacatgtggcagtttac-atgctat---ttgcatttgaagctgtttatcactc s panTro5.chr4 192932691 152 + 194502333 ctttcatcatttcccatttaatccagctttctggctgagtaattttgcagaaagccctttatcccgtgtcacagatggaactttgcagtggcctat-tctgatgaacatgtggcagtttac-atgctat---ttgcatttgaagctgtttatcactc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192816339 152 + 195804263 ctttcatcatttcccatttaatccagctttctggctgagtaattttgcagaaagccctttatcccgtgtcacagatggaactttgcagtggcctat-tctgatgaacatgtggcagtttac-atgctat---ttgcatttgaagctgtttatcactc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853596 152 + 4876863 ctttcatcatttcccgtttaatccagctttctggctgagtaattctgcagaaagccctttctcccatgtcacagatggaactttgcagtggcctat-tctgatgaacatgtggcagtttac-atgctat---ttgcatttgaagctgtttatcactc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112744299 152 + 115148730 ctttcatcatttcctgtttaatccagctttctggctgagtaattttgcagaaagccctttctcccatgtcaccgatggaactttccagtggcctat-tctgatgaacacatggcagtttac-atgctat---ttgcatttgatgctgtttatcactc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189027110 152 + 190429646 CTTCCATCATTTCTCGTTTAATCCAGCTTCCTCGCTGAGTGATTTTGCAGAAAGCCCTTTCTCCCGTGTCACCGATGGAACTCTCTAGTGGCCTAT-TCTGAGGAACACGTGGCAGTTTAC-ATGCTGT---TTgcatttgatgctgtttgtcactc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187969972 152 + 189454096 CTTCCATCATTTCTCGTTTAATCCAGCTTCCTCGCTGAGTGATTTTGCAGAAAGCCCTTTCTCCCGTGTCACCGATGGAACTCTCTAGTGGCCTAT-TCTGAGGAACACGTGGCAGTTTAC-ATGCTGT---TTgcatttgatgctgtttgtcactc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361605 152 - 25927173 CTTCCATCATTTCTCGTTTAATCCAGCTTCCTCGCTGAGTGATTTTGCAGAAAGCCCTTTCTCCCGTGTCACCGATGGAACTCTCTAGTGGCCTAT-TCTGAGGAACACGTGGCAGTTTAC-ATGCTGT---TTgcatttgatgctgtttgtcactc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3391315 152 + 4669795 CTTTCATCATTTCTCGTTTAATCCAGCTTCCTCGCTGAGTGATTTTGCAGAAAGCCCTTTCTCCCGTGTCACCGATGGAACTTTCTAGTGGCCTAT-TCTGAGGAACACGTGGCAGTTTAC-ATGCTGT---TTgcatttgatgctgtttgtcactc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134348908 152 + 135778131 cttccatcatttctcatttaatccagcttcctcgctgagtgattttgcagaaagtcctttctcccatgtcaccaatggaactttctagtggcctat-tctgaggaacacatggcagtttac-atgctgt---ttgcatttgatgctgtttgtcgctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2805015 152 - 2847728 CTTTCATCATTTCTCGTTTAATCCAGCTTCCTCGCTGAGTGATTTTGCAGAAAGCCCTTTCTCCCGTGTCACCGATGGAACTTTCTAGTGGCCTAT-TCTGAGGAACACGTGGCAGTTTAC-ATGCTGT---TTgcatttgatgctgtttgtcactc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 912050 152 + 2368649 ctttcatcatttcttgtttaatccagcttcctcgctgagtgattttgccgaaagccctttctcccatgtcaccgatggaacttcctagtggcctat-tctgaggaacacgtggcagtttac-atgctgt---ttgcatttgatgctgtttgtcactc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189648510 117 - 190850796 CTTCT--------------AATCCCGCCTCCTCTCTGAGTAGTTTTACAGAAAGCCCTTCCTCCAGTGTCACCGATGTAACTTTAGAGTGGCCTG----------------------TTAC-ATGCCAT---CTGCATCTGACGCTGTTTGTCACCC i calJac3.chr3 C 0 I 1442 s saiBol1.JH378165 13136550 138 - 14256875 CTTTC--------------AGTCCCGCTTCCTCTCCGAGTAGTTTTGCAGAAAGCCCTCCCTCCAGTGTCCCCGATGTAACCTCCTAGTGGCCTGT-TCTGATGAACACGCAGCAGTTTAC-ATGCTGT---TGGCATCTGGTGCTGTTTGTCACTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1026925 136 - 2196201 CTTTC--------------AAT-CCGCTTCCTCTCCGAGCAGTTTTGCAGAAAGCCCGCCCTCCAGTGTCACCGATGTAACTTTCGAGTGG-CTGT-TCTGATGAGCACGCGGCAGTTGAC-ATGCTAT---TTGCATCTGATGCTGTTTGTCACTC i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16982912 142 - 59632846 CCTTTCTCATTTTCCATTTAATCCAACTTCCACTCA-------CTTACAGGAAATCTCCTTCCCAAGGTCACCAATATAATATCC-----ATCTAT-TCCAAAGAACATGTGGCAGTTTAC-ATGCTACTCATTACATTTGATACTGTTTGTCACT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1478631 149 - 2520184 CTTTCTTCATTTCACATTCAATCTAATTTCC-ATTTCAGTACCTGTACTGAAAATCTTCTCTGCAAGATAATCAATATGATTTTCTGGATAACTATATCCAATATACACAGAACAAATTCCTATGCTAC---CTGCATTTAATAC----TACCACTC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=144263.000000 s hg38.chr4_KI270789v1_alt 145757 20 + 205944 cctccttctgagtactttct s panTro5.chr4 192932843 20 + 194502333 cctccttctgagtactttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192816491 20 + 195804263 cctccttctgagtactttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853748 20 + 4876863 cctccttctgagtactttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112744451 20 + 115148730 cctccttctgagtactgtct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189027262 20 + 190429646 cctccttctgaggactctct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187970124 20 + 189454096 cctccttctgaggactctct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361757 20 - 25927173 cctccttctgaggactctct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3391467 20 + 4669795 cctccttctgaggactctct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134349060 20 + 135778131 cctccttctgaggactctct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2805167 20 - 2847728 cctccttctgaggactctct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 912202 20 + 2368649 cctccttctgaagattctct i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13136688 18 - 14256875 TCTCCT--TTAGTACTTTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1027061 18 - 2196201 CCTCCT--TGAGTACTTCCG i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16983054 16 - 59632846 ----CTTCTGAATACTCTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1478780 20 - 2520184 TTTCCTTGTAGAAATTTTCT i dasNov3.JH570353 C 0 I 57 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=3840530.000000 s hg38.chr4_KI270789v1_alt 145777 503 + 205944 tcttggtgggcttttatgatagtaattgctatcctactgctgagtttctgac----cactgcttgtcagacactttattatgctccctttcctttgcccatacttgcaaagttagatttccacatatgc-ctttcccgtcttcttattccatgagatgtacctaagtgatttcatccattgctatgggttcaactactgctaatatgttctttactcccaactctctttctacagcttcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattccatcttaacatacacaaaactgaacttatgatccttaag-tatgaggccagttc-tttcttatgcattttctaaatcagtgagtgatactatctcttgtcctgttgtcctgggcagaattgcaggaggtgac----tgctttctctaccctcCCTATAAAAATTACCATCTCTCGTTTACCA----ACCTCCCAATACCCCAATCATTAGTATCTTTTTAAGAAATGATTTTCTGTT s panTro5.chr4 192932863 502 + 194502333 tcttggtgggcttttatgatagtaattgctatcctactgctgagtttctgag----cactgcttgtcagacactttattatgctccctttcctttgcccatacttgcaaagttagatttccacatatgc-ctttcccgtcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaatatgttctttactcccagctctctttttacagcttcacatatttaactgcctttcaggga-----atca-----ccaaaaggcaattccatcttaatatacgcaaaactgaacttatgatccttaag-tatgaggccagttc-tttcttatgcattttctaaatcagtgagtgataccatctcttgtcctgttgtcctgg-cAGAATTGCAGGAGGTGAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATCTCTCATTTACCA----ACCTCCCAATACCCCAATCATTAGTATCTTTTTAAGAAATGATTTTCTGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192816511 502 + 195804263 tcttggtgggcttttatgatagtaattgctatcctactgctgagtttctgag----cactgcttgtcagacactttattatgctccctttcctttgcccatacttgcaaagttagatttccacatatgc-ctttcccgtcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaatatgttctttactcccagctctctttctacagcttcacatatttaactgcctttcaggga-----atca-----ccaaaaggcaattccatcttaatatacgcaaaactgaacttatgatccttaag-tatgaggccagttc-tttcttatgcattttctaaatcagtgagtgataccatctcttgtcctgttgtcctgg-cAGAATTGCAGGAGGTGAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATCTCTCATTTACCA----ACCTCCCAATACCCCAATCATTAGTATCTTTTTAAGAAATGATTTTCTGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3853768 503 + 4876863 tcttggtgggcttttatgatagtaattgctatcctactgctgtgtttctgac----cactgcttgtcagacactttattatgctccctttcctttgtccatacttgcaaagttagatttccacatatgc-ctttcccgtcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaatatgttctttactcccaactccctttctacagcttcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattccatcttaacatacacaaaactgaacttatgatccttaag-tatgaggccagttc-tttcttatgcattttctaaatcagtgagtgataccatctcttgtcctgttgtcctgggcagaattgcaggaggtgac----tgctttctctaccctcCCTATAAAAATTACCATCTCTCGTTTACCA----ACCTCCTGATACCCCAATCATTAGTATCTTTTTAAGAAATGATTTTCTGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112744471 502 + 115148730 tcttggttggcttttatgatagtatttgctatcctactcctgagtttttgac----cactgctcgtcagacactttattatgctccctttcctttgcccacacttgcaaagttagatttccatatatgc-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaatatgttccttact-ccaactctctttctacagcttcacatatttaactgccttttaggga-----atca-----ccagaaggcaattccatcttaacatacacaaaactgaacttatgatccttaag-tatgaggctgattc-tttcttatgcattttctaaatcagtgagtgataccatctcttgtcctgttgtcctgggcagaaTTGCAGGAGGTAAC----TGCTTTCTCTGCCCTCCCTATAGAAATTACCATCTCTCATTCACCA----ACCTCCCCATACCCCAATCAGTAGTATCTTTTTAAGAAAGGATTTTCTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189027282 487 + 190429646 tcttggttggcttttatgatggtaatcgctttcctactcctgagtttctgac----cactgcttgtcagacactttattgcgctccctttcctttgcccacacttgcacagtttgatttctatatatgg-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaacatgttttttactcccaattctgtttctagAGTTTCACGTATTTAACTGCCTTTTAGGGA-----ATCA-----CCAAAAGGCAATTCAATCTT----------------AACTTCTGATCCTTAAA-TATGAGGCCAATTC-TTTCTTACGCATTTTCTAATTCAATGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCAGGAGGTAAC----TACTTTCTCTACCCTCCCTATAAAAATTACCATTTTTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187970144 490 + 189454096 tcttggttggcttttatgatggtaatcgctttcctactcctgagtttctgac----cactgcttgtcagacactttattgcgctccctttcctttgcccacacttgcacagtttgatttctatatatgg-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaacatgttttttactcccaattctgtttctagAGTTTCACGTATTTAACTGCCTTTTAGGGA-----ATCA-----CCAAAAGGCAATTCAATCTT----------------AACTTCTGATCCTTAAA-TATGAGGCCAATTC-TTTCTTACGCA-TTTCTAATTCAATGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCAGGAGGTAACTACTTACTTTCTCTACCCTCCCTATAAAAATTACCATTTTTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24361777 487 - 25927173 tcttggttggcttttatgatggtaatcgctttcctactcctgagtttctgac----cactgcttgtcagacactttattgcgctccctttcctttgcccacacttgcacagtttgatttctatatatgg-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaacatgttttttactcccaattctgtttctagAGTTTCACGTATTTAACTGCCTTTTAGGGA-----ATCA-----CCAAAAGGCAATTCAGTCTT----------------AACTTCTGATCCTTAAA-TATGAGGCCAATTC-TTTCTTACGCATTTTCTAATTCAATGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCAGGAGGTAAC----TACTTTCTCTACCCTCCCTATAAAAATTACCATTTTCCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3391487 503 + 4669795 tcttggttggcttttatgatggtaatcgctttcctactcctgagtttctgac----cactgcttgtcagacactttattgcgctccctttcctttgcccacacttgcacagtttgatttctatatatgg-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccactaacatgttctttactcccaattctctttctagagcttcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattcaatcttaacatatataaaacggaacttctgatcctTAAG-TATGAGGCCAATTC-TTTATTACGCATTTTCTAAATCAGTGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCAGGAGGTAAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATTTCTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134349080 503 + 135778131 tcttggttggcttttatgatggtaatcgctttcctactcctgagtttctgac----cactgcttgtcagacactttattacgctccctttcctttgcccacacttgcacagtttgatttctatatatgg-ctttcccctcttcttattccatgagatttatctaagtgatttcatccattgctatgggttcaactactgctaacatgttttttactcccaattctgtttctagagtttcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattcaatcttaacatacacaaaactgaacttctgatccttaag-tctgaggccaattc-tttcttacgcattttctaattcaatgagtgataccatctcttatcctgttgtcctgggcagaaTTGCAGGAGGTAAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATTTCTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2805187 503 - 2847728 tcttggttggcttttatgatggtaattgctttcctactcctgagtttctgac----cactgcttgtcagacactttattgcgctccctttcctttgcccacacttgcacagtttgatttctatatgtgg-ctttcccctcttcttattccatgagatttatcgaagtgatttcatccattgctatgggttcaactaccgctaacatgttctttactcccaattctctttctagagcctcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattcaatcttaacatacacaaaactgaacttctgatcctTAAG-TATGAGGCCAATTC-TTTATTACGCATTTTCTAAATCAGTGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCAGGAGGTAAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATTTCTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 912222 501 + 2368649 tcttggttggcttttatgatggtgatcgctttcctactcctgaatttcc-ac----cg-tgcttgtcagatactttattatgctccctttcctttgcccacacttgcagagtttgatttctatatatgg-ctttcccctcttcctattccatgagatttatctaagtgatttcatccattgctatgggttcaactaccgctaacatgttctttactcccaattctctttctagagcttcacatatttaactgccttttaggga-----atca-----ccaaaaggcaattcagtcttaacatacacaaaactgaacttctgatccttaag-tatgaggccaattc-tttcttacgcattttctaaatcagtgagtgataccatctcttatcctgttgtcctgggcagaaTTGCAGGAGGTAAC----TGCTTTCTCTACCCTCCCTGTAAAAATTACCATTTCTCATTCACCA----ACCTCCTCATACCCCAATCATTAGTATCTTTTTAAGAAATGATCTTCTCTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13136706 507 - 14256875 CCTTGCTTGG-TTTTATGATATTGATTGCTATTTCACTGCTGAGTTTCTGACCGCTGCTTGCTTGTCAGACACTTTGTTATGCTCCCTTTCCTTTGCCCACACTTGTGAAGTTCAGTTTCCATATAGGG-CGTTCCCCTCTTCTTATTCCATGAAATTTATCTAAGCGATTTCACCCATTGCTATGGGTTCAACTACTGCTAACGTGTTCTTCACTCCCTATTCTCTTTCTATAGTGTCGCATATTTAACTATATTTTAGGGA-----ATCA-----CCAAAAGGCAATTCCATCTTAACAGACACAAAACTGAATTCAGGGTCCTTAAG-TCTGAGGCCAATTCTTTTCTTACGTATTTTCTAAATCAGGCAGTGATTCCATCTCTTATCTTGTTGTCCTGGGCAGAATTGCTGGAGGTAAC----TGCTTTCTCTACCCTCCCTATAAAAATTACCATCTCTCATTCAGCA----ACCTCCCCATACCCCAATCATTAGTACCTTTTGAAGAAATAATTTCCTCTT i saiBol1.JH378165 C 0 I 264 s cebCap1.NW_016107886v1 1027079 489 - 2196201 TCTTGCTTGG-TTTTATGATATTGATTGCTATGTGACTGCTGAGTTTCTGAC----GACTGCTTGTCAGGCACTTTATTATGCTCCCTTTCCTTTGCCCACACTTGCAAAGTTCAGTTTCCATATTGGG-CGTTCCCCTCTCCTTATTCCATGTAATTTATCTAAGCGATTTCACCCATTGCTATGGGTTCAACTACTGCTAACGTGTTCTTCACTCCCTATTCTCTTTCTATAGCTTCTCATATTTAACTACCTTTTAGAGA-----ATCA-----CCAAAAGGCAATTCCATCTTA-------------TGAATTCAGGGTCTTTAAG-TATGAGGCCAATTC-TTTCTTAAGTATTTTCTTAATCAGCGAGTGATACCATCTCTTATCCTGTTGTCCTGGGCAGAATTGCCAGAGGTAAA----TGCTTTCTCTACCCTCCCTATAAAAATTACCCTCTCTCATTCAGCA----ACCTTCCCATACCCTAATCATTAGTATCTTTTTAAGAAATAATTTTCTCTT i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16983070 464 - 59632846 TCTTG-----------------------------------------TTTGAT----------TTCTCAGATCCTTCTTTATGCTCCTTTTGCTTTGACCATACTTGCAAAGTTTGATGTCCTTGTCTGGAATTTTTCCTCTGCTTATTCTATGC-AGTCATCTAAAtggtttcatctgttgccatggtttcaactactgctaacatattcattattcccgactctctttccatagcctcagagattgagctactttttaggaattgccatcaggtatcctagaggcatttccatctcaatatatacaaaactaaaTATGTTGTCCTTAGGTTATTATGCTGAATT-CTTCTTGCATATTTTCTAAATCAGTAAATGATATGATTTCCTGTTCTGTTGTTGTAGGCAGCATTGTGGCAGATAAA----TCTTTTCTCACTCCTCCCTGTAAAAG-CACCATCTCTCATTCATCATCACCCCTACCTACATCTACACCATATGTATCTTTTTAATAAATCATTT------ i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478800 57 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=7494.000000 s hg38.chr4_KI270789v1_alt 146280 11 + 205944 ---GTTTAACATTT s panTro5.chr4 192933365 11 + 194502333 ---GTTTAACATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817013 11 + 195804263 ---GTTTAACATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854271 11 + 4876863 ---GTTTAACATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112744973 11 + 115148730 ---GTTTAACATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189027769 11 + 190429646 ---TAAAAAAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187970634 11 + 189454096 ---TAAAAAAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24362264 11 - 25927173 ---TAAAAAAAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3391990 11 + 4669795 ---TTAAAAAAATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134349583 11 + 135778131 ---TTTAAAAAATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2805690 11 - 2847728 ---TTTAAAAAATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 912723 11 + 2368649 ---TTTAAAAAATG i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1027568 10 - 2196201 ----TTTAAAAATT i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16983534 6 - 59632846 GTCTTT-------- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478800 57 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13137213 264 - 14256875 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=2868819.000000 s hg38.chr4_KI270789v1_alt 146291 378 + 205944 TTTATATGCTATTACCTATATGGTTTTCCTCCTGAAATGGGATATTGGGTAAGAGGGTACCAGATGGAGGTCACATAGACCTACAGTTTATTCAAA-GGGGACATCTATGGAGCAAAGGCAAAATGGAGAACCCA----GTGCAGCCAAACAGCTACTCAAAGGTCTGAGCGGAGATACAGAAATGACACAGGAGATAACAGAAAGAGAGAGACATATCAAGTGGGTTTTGAGTGTA-GGCAAAACCACATTTACCCGTAGCTCTGGAGAACCCACTGGCACTGTTTTGAGACTGT-TGCAGCCTG--------------CAAGGGAGGGCGGACACTGAGTTCAGACACGCA-CACCCTCCGACCAGCTCCCAAATGTCTGCTGATGTTTACAACTTTG s panTro5.chr4 192933376 378 + 194502333 TTTATATGCTATTACCTATATGGTTTTCCTCCTGAAATGGGATATTGGGTAAGAGGGTACCAGATGGAGGTCACATAGACCTACAGTTTATTCAAA-GGGGACATCTATGGAGCAAAGGCAAAATGGAGAACCCA----GTGCAGCCAAACAGCTACTCAAAGGTCTGAGCGGAGATACAGAAATGACACAGGAGATAACAGAAAGAGAGAGACATATCAAGTGGGTTTTGAGTGTA-GGCAAAACGACATTTACCCGTAGCTCTGGAGAACCCACCAGCACTGTTTTGAGACTGT-TGCAGCCTG--------------CAAGGGAGGGCGGACACTGAGTTCAGACACGCA-CACCCTCCGACCAGCTCCCAAATGTCTGCTGATGTTTACAACTTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817024 378 + 195804263 TTTATATGCTATTACCTATATGGTTTTCCTCCTGAAATGGGATATTGGGTAAGAGGGTACCAGATGGAGGTCACATAGACCTACAGTTTATTCAAA-GGGGACATCTATGGAGCAAAGGCAAAATGGAGAACCCA----GTGCAGCCAAACAGCTACTCAAAGGTCTGAGCGGAGATACAGAAATGACACAGGAGATAACAGAAAGAGAGAGACATATCAAGTGGGTTTTGAGTGTA-GGCAAAACCACATTTACCCGTAGCTCTGGAGAACCCACCAGCACTGTTTTGAGACTGT-TGCAGCCTG--------------CAAGGGAGGGCGGACACTGAGTTCAGACACGCA-CACCCTCCGACCAGCTCCCAAATGTCTGCTGATGTTTACAACTTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854282 378 + 4876863 TTTATATGCTATTACCTATATGGTTTTCCTCCTGAAATGGGATATTGGGTAAGAGGGTACCAGATGGAGGTCACATAGACCTACAGTTTATTCAAA-GGGGACATCTATGGAGCAAAGGCAAAATGGAGAACCCA----GTGCAGCCAAACAGCTACTCAAAGGTCTGAGCGGAGATACAGAAATGACACAGGAGATAACAGAAAGAGAGAGACATATCAGGTGGGTTTTGAGTGTA-GGCAAAACCACATTTACCCGTAGCTCTGGAGAACCCACTGGCACTGTTTTGAGACTGT-TGCAGCCTG--------------CAAGGGAGGGCGGACACTGAGTTCAGACACGCA-CACCCTCCGACCAGCTCCCAAATGTCTGCTGATGTTTACAACTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112744984 378 + 115148730 TTTATATGCTATTACCTATATGGTTTTCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTAGATGGAGGTCACATAGACCTACAGATTATTCAAA-GGGGACATCTATGGAGCAAAGGCCAAATGGGGAACTCA----GTGCAGCCAAACAGCTACTCAAAGGTCTGAGTAGAGATACAGAAATGACCCAGGAGATAACAGAAAGAGAGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCCGTAGCTCTGGAGAACCCACTGGCACAG-TTTGAGACTGT-TGCAGCCTG--------------CAAGGGAGGGCGGAGGCTGAGTTCAGACACGCA-CACCCTCCGACCAGCTCCTGAATGTCTGATGATGTTTACAACTTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189027780 378 + 190429646 TTTATATGCTATTACCTATAAGGTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTACCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GGGATATCTACGGAGCAAAGGCAAGATGGAGAACACA----GTGCAGCCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACATGAGTTAACAGACAAAGGGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACATTGAGTTCAGACGCGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAACTTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187970645 378 + 189454096 TTTATATGCTATTACCTATAAGGTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTACCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GGGATATCTACGGAGCAAAGGCAAGATGGAGAACACA----GTGCAGCCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACATGAGTTAACAGACAAAGGGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACATTGAGTTCAGACGCGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAACTTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24362275 378 - 25927173 TTTATATGCTATTACCTATAAGGTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTACCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GGGATATCTACGGAGCAAAGGCAAGATGGAGAACACA----GTGCAGCCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACATGAGTTAACAGACAAAGGGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACATTGAGTTCAGACGCGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAGCTTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3392001 376 + 4669795 TTTATATGCTATTACCTATAAGGTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTAGCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GGGATATCTACGGAGCAAAGGCAAGATGGAGAACCCA----GTGCAGTCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATG--ACATGAGATAACAGAAAAAGGGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCCGGAGAACCCACTGGCACCATTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACACTGAGTTCAGACGCGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAACTTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134349594 378 + 135778131 TTTATATGCTATTACCTATAAGCTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTAGCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GAGATATCTACAGAGCAAAGGCAAGATGGAGAACACA----GTGCAGCCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACATGAGATAACAGAAAAAGGGAGACATATCAAGTGCATTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACACTGAGTTCAGACACGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATATTTACAACTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2805701 376 - 2847728 TTTATATGCTATTACCTATAAGGTTTCCCTCCTGAAATGGGATATTGGGTAAGAGGGTACTAGCTGGAGGTCGCATAGAACTACAGATTATTCAAA--GGGGTATCTACGGAGCAAAGGCAAGATGGAGAACCCA----GTGCAGTCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACA--AGATAACAGAAAAAGGGAGACATATCAAGTGGGTTTTGAGTGTAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAACGGAGGGTGGACACTGAGTTCAGACGCGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAACTTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 912734 378 + 2368649 TTTATATGCTATTACCTATAAGGTTTCGCTCCTGCAATGGGATATTGGGTAAGAGGGTACTAGCTAGAGGTCACATAGAACTACAGATTATTCAAA--GGGATATCTACGGAGCAAAGGCAAGATGGAGAACCCA----GTGCAGCCAAACAGCTATTCAAAGGTCTGAGCAGAGATACAGAAATGACACATGAGATAACAGAAAAAGGGAGACATATCAAGTGGGTTTTGAGTGCAGGGCAAAACCACATTTACCTGTAGCTCTGGAGAACCCACTGGCACCGTTTTAAGACTGT-TGCAGCCTG--------------CAAGGGAGGGTGGACACTGAGTTCAGACACGCA-CACCCTCTGACCAGCTCCCGAATGTCTGATGATGTTTACAACTTTG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13137477 357 - 14256875 TTTATCTGCCATTACCTATATGGTTTCCCTCCTGAAATGAGATATTGGGTAAGAGGGTCCTGTCTGGAGGTCTCATAGATCTACAGATCATTCAAA-AGGGATATCTATGGAGCAAAGCCAAAATGGAGAACGCA----GTGGAGCCAAACAGCTGCTCACAGGACTGAGCAGAGACACAGAAATGATAC-TGAGATAACAGACA----GAGACATATCAAGTGGGTTTTCAGTGCAGGGAAAAACCACATTTACCTGCAGCTCTGGAGAACCC-----------------ACTGT-CACAGGCTG--------------CAAGGGAGGGCGGACACTGAGTGCAGACGTTCA-CACCCTCCGGCCAGCTCCCGAATGTCTGATGATGTTTAGAACGTTG i saiBol1.JH378165 I 264 C 0 s cebCap1.NW_016107886v1 1027578 357 - 2196201 TTTATCTGCCATTACCTGCATGGTTTCCCTCCTGAAATGGGATACTGGGTAAGAGGGTCCTATCTGGAGGTCTCATAGATCTACAGATTATTCAAA-AGGGATATCTAGGGATCAAAGCCAAAGTGGAGAACCCA----GTGGAGCCAAGCAGCTGCTCACAGGACTGAGCAGAGTTACAGAAATGACAC-TGAGATAACAGAGA----GAGACATATCAAGTGGGTTTTGAGTGTAGGGAAAAAACACATTTACCTGCAGCTCTGGAGAACCC-----------------ACTGT-CGCAGCCTG--------------CAAGGGAGGGTGGACACCGAGCGTAGACGTTCA-CGCCCTCCGGCTAGCTCCCGAGTGTCTGAAGATGTTTAGAACTTTG i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16983540 375 - 59632846 TCTACTTATAATTATCTATATGGTTTCCTAACTACTCTGAAGCACTAAGCAGAACAGAACTAGCTGGAGATCACATACATGTACAAGTCATTCAAACCATAATGTGTATGGGGCAAAG-CAAAACAAAGAAAAAAAAATGTGTAGCT--------------AGGTCCGAGGAGAGATGTAGGAACTGCATATTAGCTAACAGAGA----GAGACCTATCAGGTGGGGTTTGAAGGTAAGACAAAGC-ACACTTCCTTATAGCTCTAGAAAGCCGACATAGGCTGCCTTCATGAAGTGTGCAGCATGGCTATGTAATATATTGAGGGAGTGTGGACACT-----TAGATATTTGTCACCCTCCACTCAACTCCTGAATATCTGATGATGTTTACAACTTTT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478800 57 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=373756.000000 s hg38.chr4_KI270789v1_alt 146669 40 + 205944 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACACA s panTro5.chr4 192933754 40 + 194502333 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817402 40 + 195804263 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854660 40 + 4876863 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745362 40 + 115148730 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189028158 40 + 190429646 CTTCCTGCTTTCCGACCTGGTCTTAGCCTTTTGATACACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187971023 40 + 189454096 CTTCCTGCTTTCCGACCTGGTCTTAGCCTTTTGATACACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24362653 40 - 25927173 CTTCCTGCTTTCCGACCTGGTCTTAGCCTTTTGATACACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3392377 40 + 4669795 CTTCCTGCTTTCCGACCTGGTCTTAGCCTTTTGATACACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134349972 40 + 135778131 CTTCCTGCTTTCCTACCTGGTCTTAGCCTTTTGATACATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2806077 40 - 2847728 CTTCCTGCTTTCCGACCTGGTCTTAGCCTTTTGATACACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 913112 40 + 2368649 CTTCCTGCTTTCCTACCTGGTCTTAACCTTTTGATACATA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13137834 40 - 14256875 CTTCCTGCTTTCCTACCTGGCCTGAGCCTTTTGATACACA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1027935 35 - 2196201 CTTCCTGCTTTCCTACCTGGCCTGAGCCTTTTG-----TA i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16983915 39 - 59632846 CTTCCTGCCTTCCTAATTGGTATTAGCCTTTTGATACTC- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1478857 40 - 2520184 CTTCCTGCTCTGCTAACTTGTCTTAGCCTTTTGAGATATA i dasNov3.JH570353 I 57 I 6611 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=227909.000000 s hg38.chr4_KI270789v1_alt 146709 31 + 205944 CCCTCCCACTGCTATCAGAGTAAGATTTGAG s panTro5.chr4 192933794 31 + 194502333 CCCTCCCACTGCTATCAGAGTAAGATTTGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817442 31 + 195804263 CCCTCCCACTGCTATCAGAGTAAGATTTGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854700 31 + 4876863 CCCTCCCACTGCTATCAGAGTAAGATTTGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745402 31 + 115148730 CCCTCCCACTGCTATCCGAGTAAGATTTGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189028198 31 + 190429646 CCGTCCCACTGCTATCAGAGAAAGATTTGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187971063 31 + 189454096 CCGTCCCACTGCTATCAGAGAAAGATTTGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24362693 31 - 25927173 CCGTCCCACTGCTATCAGAGAAAGATTTGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3392417 31 + 4669795 CCGTCCCACTGCTATGAGAGAAAGATCTGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134350012 31 + 135778131 CCGTCCCACCACTATCAGAGAAAGATTTGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2806117 31 - 2847728 CCGTCCCACTGCTGTGAGAGAAAGATCTGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 913152 31 + 2368649 CCGTCCCACTGCTATCAGAGAAAGATTTGAG i colAng1.NW_012116221v1 C 0 I 3247 s saiBol1.JH378165 13137874 31 - 14256875 TGCTCCCACTGCTTTCAGAGTAAGATTTGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1027970 31 - 2196201 CGCTCCCACTGCTTTCAGAGTAAGATTTGAG i cebCap1.NW_016107886v1 C 0 I 3829 s canFam3.chr16 16983954 26 - 59632846 ---TCTTACTGTTCTCTGAATAACATTTG-- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=26374.000000 s hg38.chr4_KI270789v1_alt 146740 6 + 205944 CTAAGT s panTro5.chr4 192933825 6 + 194502333 CTAAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817473 6 + 195804263 CTAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854731 6 + 4876863 CTACGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745433 6 + 115148730 CTAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189028229 6 + 190429646 GTAAGT i rheMac8.chr5 C 0 I 3754 s macFas5.chr5 187971094 6 + 189454096 GTAAGT i macFas5.chr5 C 0 I 3763 s macNem1.NW_012013133v1 24362724 6 - 25927173 GTAAGT i macNem1.NW_012013133v1 C 0 I 3452 s cerAty1.NW_012001672v1 3392448 6 + 4669795 GTAAGT i cerAty1.NW_012001672v1 C 0 I 3299 s chlSab2.chr7 134350043 6 + 135778131 GTAAGT i chlSab2.chr7 C 0 I 3240 s manLeu1.NW_012102221v1 2806148 6 - 2847728 GTAAGT i manLeu1.NW_012102221v1 C 0 I 3332 s saiBol1.JH378165 13137905 6 - 14256875 GTAAAT i saiBol1.JH378165 C 0 I 4227 s canFam3.chr16 16983980 2 - 59632846 ----GT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e cebCap1.NW_016107886v1 1028001 3829 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e colAng1.NW_012116221v1 913183 3247 + 2368649 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=21607.000000 s hg38.chr4_KI270789v1_alt 146746 23 + 205944 ACATAATCTGGCCCTGCCAGATT s panTro5.chr4 192933831 23 + 194502333 ACATAATCTGGCCCTGCCAGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817479 23 + 195804263 ACATAATCTGGCCCTGCCAGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854737 23 + 4876863 ACATAATCTGGCCCTGCCAGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745439 23 + 115148730 ACATAATCTGGCCTTGCCAGATT i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 16983982 23 - 59632846 ATACATTTCGCTCAGTGCTGATT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e cebCap1.NW_016107886v1 1028001 3829 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13137911 4227 - 14256875 I e colAng1.NW_012116221v1 913183 3247 + 2368649 I e manLeu1.NW_012102221v1 2806154 3332 - 2847728 I e chlSab2.chr7 134350049 3240 + 135778131 I e cerAty1.NW_012001672v1 3392454 3299 + 4669795 I e macNem1.NW_012013133v1 24362730 3452 - 25927173 I e macFas5.chr5 187971100 3763 + 189454096 I e rheMac8.chr5 189028235 3754 + 190429646 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1911.000000 s hg38.chr4_KI270789v1_alt 146769 1 + 205944 A s panTro5.chr4 192933854 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817502 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854760 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745462 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s cebCap1.NW_016107886v1 1031830 1 - 2196201 A i cebCap1.NW_016107886v1 I 3829 C 0 s canFam3.chr16 16984005 1 - 59632846 A i canFam3.chr16 C 0 C 0 e calJac3.chr3 189648627 1442 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13137911 4227 - 14256875 I e colAng1.NW_012116221v1 913183 3247 + 2368649 I e manLeu1.NW_012102221v1 2806154 3332 - 2847728 I e chlSab2.chr7 134350049 3240 + 135778131 I e cerAty1.NW_012001672v1 3392454 3299 + 4669795 I e macNem1.NW_012013133v1 24362730 3452 - 25927173 I e macFas5.chr5 187971100 3763 + 189454096 I e rheMac8.chr5 189028235 3754 + 190429646 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=11671.000000 s hg38.chr4_KI270789v1_alt 146770 3 + 205944 TGA s panTro5.chr4 192933855 3 + 194502333 TGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817503 3 + 195804263 TGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854761 3 + 4876863 TGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745463 3 + 115148730 TGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187974863 3 + 189454096 tgt i macFas5.chr5 I 3763 C 0 s chlSab2.chr7 134353289 3 + 135778131 tga i chlSab2.chr7 I 3240 C 0 s colAng1.NW_012116221v1 916430 3 + 2368649 TGA i colAng1.NW_012116221v1 I 3247 C 0 s calJac3.chr3 189650069 3 - 190850796 TAA i calJac3.chr3 I 1442 C 0 s saiBol1.JH378165 13142138 3 - 14256875 TGA i saiBol1.JH378165 I 4227 C 0 s cebCap1.NW_016107886v1 1031831 3 - 2196201 TGA i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16984006 3 - 59632846 TAC i canFam3.chr16 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e manLeu1.NW_012102221v1 2806154 3332 - 2847728 I e cerAty1.NW_012001672v1 3392454 3299 + 4669795 I e macNem1.NW_012013133v1 24362730 3452 - 25927173 I e rheMac8.chr5 189028235 3754 + 190429646 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=64470.000000 s hg38.chr4_KI270789v1_alt 146773 6 + 205944 CATTAG s panTro5.chr4 192933858 6 + 194502333 CATTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817506 6 + 195804263 CATTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854764 6 + 4876863 CATTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745466 6 + 115148730 CATTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189031989 6 + 190429646 CATTAG i rheMac8.chr5 I 3754 C 0 s macFas5.chr5 187974866 6 + 189454096 cattag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24366182 6 - 25927173 CATTAG i macNem1.NW_012013133v1 I 3452 C 0 s cerAty1.NW_012001672v1 3395753 6 + 4669795 CATTAG i cerAty1.NW_012001672v1 I 3299 C 0 s chlSab2.chr7 134353292 6 + 135778131 cattag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2809486 6 - 2847728 CATTAG i manLeu1.NW_012102221v1 I 3332 C 0 s colAng1.NW_012116221v1 916433 6 + 2368649 CATTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189650072 6 - 190850796 CATTAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13142141 6 - 14256875 CATTAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1031834 6 - 2196201 CATTAG i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16984009 6 - 59632846 AATTAG i canFam3.chr16 C 0 I 2093 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=445050.000000 s hg38.chr4_KI270789v1_alt 146779 51 + 205944 TTGGAGAATAGATAGGTCAATGGGACCTGAGATACATTTTAGAAAAATATT s panTro5.chr4 192933864 51 + 194502333 AAGGAGAATAGATAGGTCAATGGAACCTGAGATACATTTTAGAAAAATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817512 51 + 195804263 AAGGAGAATAGATAGGTCAATGGAACCTGAGATACATTTTAGAAAAATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854770 51 + 4876863 TTGGAGAATAGATAGGTCAATGGGACCTGAGATACATTTTAGAAAAATATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745472 51 + 115148730 TTGGAGAATAGATAGGTCACTGGAACCTAAGATACATTTTAGAAAAATATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189031995 51 + 190429646 TTGGAGAATAGATAGGTCAATGGAACCTAAGATACAGTTTAGAAAAATATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187974872 51 + 189454096 ttggagaatagataggtcaatggaacctaagatacagtttagaaaaatatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24366188 51 - 25927173 TTGGAGAATAGATAGGTCAATGGAACCTAAGATACAGTTTAGAAAAATATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3395759 50 + 4669795 TTGGAGAATAGATAGGTCAATGGAACCTAAGATACATTTTAGAAAAA-ATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134353298 51 + 135778131 ttggagaatagataggtcaatggaacctaagatacattttagaaaaatatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2809492 51 - 2847728 TTGGAGAATAGATAGGTCAATGGAACCTAAGATACATTTTAGAAAAATATT i manLeu1.NW_012102221v1 C 0 I 6341 s colAng1.NW_012116221v1 916439 51 + 2368649 TTGGAGAATAGATAGGTCAATGGAACCTAAGATACATTTTAGAAAAACACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189650078 51 - 190850796 TTGGAGGATAGATAGGTCAATGGAACATAAGATACATTTTAGAAAAATATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13142147 51 - 14256875 TTGGAGGATAGATAGGTCAATAGAACATGAGATACATTTTAGAAAAATATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1031840 51 - 2196201 TTGGAGGATAGATAGGTCAATGGAACATGAGATACATTTTAGAAAAATATT i cebCap1.NW_016107886v1 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1803336.000000 s hg38.chr4_KI270789v1_alt 146830 224 + 205944 AATATGTATGCCTTATGTATAGTGTGCAGCTGGCAT---------TTTAAACACGTGGAAAATGATGAAAAATTTAATAAACCATGAGAAGAAATTGGATAAATATTTCTGATACACACACACATCAGATTCCCTTTTTTATGTCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AATATTTTTCTAAATTAACTAACATACTGGAAAATATTTGACTTAT s panTro5.chr4 192933915 223 + 194502333 AATATGTATGCCATATGTATAGTGTGCAGCTGGCAT---------TTTAAACACGTGGAGAATGATGAAAAATTTAATAAACCATGAGAGGAAATTGGATAACTATTTCCGATACACACACACATCAGATTCCCTTTTTTATGTCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AATATTTTTCTAAATTAACTAACATACTGGAAAATATTTGACTTA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817563 224 + 195804263 AATATGTATGCCATATGTATAGTGTGCAGCTGGCAT---------TTTAAACACGTGGAGAATGATGAAAAATTTAATAAACCATGAGAGGAAATTGGATAACTATTTCCGATACACACACACATCAGATTCCCTTTTTTATGTCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AATATTTTTCTAAATTAACTAACATACTGGAAAATATTTGACTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3854821 224 + 4876863 AATATGTATGCCATATGTATAGTGTGCAGCTGGCAT---------TTTAAACACGTGGAAAATGATGAAAAATTTAATAAACCACGAGAGGAAATTGGATAAATATTTCCGATACATACACACATCAGATTCCCTTTTTTATGTCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AATATTTTCCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745523 224 + 115148730 AATATGTATGCCATATGTATAGTGTGCAGGTGGCAT---------TTTAAACACGTGGAAAATGATGAAAAATTTAATAAACCACGAGAGGAAATTGGATAAATATTTCAGATACATACACACATCAGATTCCCTTTTTTATGTCACATGTAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AATATTTTTCTAAATTAACTAACATACTGGAAAATATTTGACTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189032046 222 + 190429646 AATATGTATGCCATATGTATAGTGTGCAGGTGGCAT---------TTTAGACATGTGGAAAATGATGACAAATTTAATAAACTGTGAGAGGAAATTGGATAAATATTTAAGATAC--ACATACATCAGAGTCCCTTTTTAATATCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187974923 222 + 189454096 aatatgtatgccatatgtatagtgtgcaggtggcat---------tttagacatgtggaaaatgatgacaaatttaataaactgtgagaggaaattggataaatatttaagatat--acatacatcagagtcccttttttatatcacatgcaaaaCTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24366239 222 - 25927173 AATATGTATGCCATATGTATAGTGTGCAGGTGGCAT---------TTTAGACATGTGGAAAATGGTGACAAATTTAATAAACTGTGAGAGGAAATTGGATAAATATTTAAGATAC--ACATACATCAGAGTCCCTTTTTTATATCACATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3395809 222 + 4669795 AATATGTATGCCATATGTATAGTGTGCAGGTGGCAT---------TTTAGACATGTGGAAAATGATGACAAATTTAATAAACTGTGAGAGGAAATTGGATAAATATTTAAGATAC--ACATACATCAGAGTCCCTTTTTTATATCGCATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134353349 229 + 135778131 aatatgtatgccatatgtatagtgtgcaggtggcattaaaatgtctaaagacaagtggaaaatgatgacaaatttaataaactgtgagaggaaattggataAATATTTAAGATAC--ACACACGTCAGAGTCCCTTTTTTATATCGCATGCAAAACTAAAATAATATTTGAATGGCTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGAC--AT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2815884 222 - 2847728 AATATGTATGCCATATGTATAGTGTGCAGGTGGCAT---------TTTAGACATGTGGAAAATGATGACAAATTTAATAAACTGTGAGAGGAAATTGGATAAATATTTAAGATAC--ACATACATCACAGTCCCTTTTTTATATCGCATGCAAAACTAAAATAATATTTGAATGGCTTAAACAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i manLeu1.NW_012102221v1 I 6341 C 0 s colAng1.NW_012116221v1 916490 216 + 2368649 AATATGTATGCCATACGTATAGTGTGCAGGTGGCAT---------TTTAGACATGTGGAAAATGATGACAAATTTAATAAACTGTGAGAGGAAATTGGATAAATATTTAAGAT--------ACATCAGAGTCCCTTTTTTATATCGCATGCAAAACTAAAATAATATTTGAATGACTTAATCAGTGA--------------------------------AACATTTTTCTAAATTAACTAACATACCAGAAAATATTTGACTTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189650129 221 - 190850796 AAGATGTATGCCATATGTGTAGTGTGCAGGTGGCAT---------TTTAGACACATGGAAAA--GTGAAAATTTTAATAAACTGTGGGAGGAAATTGGACAAATATTTAAGATACATACTCACATCAGATTCCCTTTTTTATATCACATGCAAAACTAAAATAATATTTGAAT-GCTTAAATAGTGA--------------------------------AATATTTTTCTAAATTAACTAACATGCCAGATCATATTTAACTTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13142198 252 - 14256875 AATATGTATGCCATATGTGCAGTGTGCAGGTACCAT---------TTTAGACACATGGAAAATGTTGAAAAATTTAATAAACTGTCAGAGGAAATTGGACAAATATTTAAGATACATACTCACATCAGATTCCCTTTTTTATATCACATGCAAAACTAAAATAATATTTGAATGGCTTAAATAGTGAAATATTTTTCTAAAT----TAACATACCAGATAATATTTTTCTAAATTAACTAACATACAAGATAATATTTAACTTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1031891 251 - 2196201 AATATGTATGCCATAT-TGTAGTGTGCAGGTGGCAT---------TTTAGACACATGGAAAATGGTGAAAAATTTAATAAACTGTGAGAGGAAATTGGACAAATATTTAAGATACAT----ACATCAGATTCCCTTTTTTATATCACATGCAAAATTAAAATAATATTTTAATGGCTTAAATAGTGAAATATTTTTCTAAATTAACTAACATATCAGATAATATTTTTCAAAATTAACTAACATACCAGATAATATTTAACTTAT i cebCap1.NW_016107886v1 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=2865186.000000 s hg38.chr4_KI270789v1_alt 147054 429 + 205944 CTCAAACCAAATATGTA-TTTTTATTGTATAGGGTTTTTTCTTTTTT-AAAAAAtttcagcttgcaatttagatataggaggtacatgggcagatttgttacaatggactattgcatgatgctgtggtttgaagtacgttacccatcaccctggtagtgagcatagttcctgataggtagtcttttttaacctaacctc----cctccctccctccctccactgtctagtagtccacagtgtctattgtgtctcatatttatgtccatacgtgctcaatgcttagcttccatttataagtgagaatatgtggtatttggttttctgtttctgcattcatttgcttagatcgcc-ccagctccatctatgttgctgcaaagaacgtgattttattc-ttttttatggcgtatagtatttcatggtgtttatgtaccac s panTro5.chr4 192934138 425 + 194502333 ----AACCAAATATGTA-TTTTTATTGTATAGGGTTTTTTCTTTTTT-AAAAAAtttcagcttgcaatttagatataggaggtacatgggcagatttgttacaatggactattgcatgatgctgtggtttgaagtacggttcccatcaccctggtagtgagcatagttcctgataggtagtcttttttaacctaacctc----cgtccctccctccctccaccgtctagtagtccacagtgtctattgtgtctcatatttatgtccatacgtgctcaatgcttagcttccatttataagtgagaatatgtggtatttggttttctgtttctgcattcatttgcttagatcacc-ccagctccatctatattcctgcaaagaatatgattttattc-ttttttatggcacatagtatttcatggtgtatatgtaccac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192817787 429 + 195804263 CTCAAACCAAATATGTA-TTTTTATTGTATAGGGTTTTTTCTTTTTT-AAAAAAtttcagcttgcaatttagatataggaggtacatgggcagatttgttacaatggactattgcatgatgctgtggtttgaagtacggttcccatcaccctggtagtgagcatagttcctgataggtagtcttttttaacctaacctc----cgtccctccctccctccaccgtctagtagtccacagtgtctattgtgtctcatatttatgtccatacgtgctcaatgcttagcttccatttataagtgagaatatgtggtatttggttttctgtttctgcattcatttgcttagatcgcc-ccagctccatctatattcctgcaaagaatatgattttattc-ttttttatggcatatagtatttcatggtgtatatgtaccac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3855045 424 + 4876863 CTTAAACCAAATATGTA-TTTTTATTGTACAGGGTTTTTTCTTTTTT-AAAAAAtttcagcttgcaatttagatataggaggtacatgggcagatttgttacagtggactattgcatgatgctgtggtttgaagtacggttcccatcaccctggtagtgagcatagttcctgataggtggtcttttttaacctaacctc----cctccctccctccctccaccgtctagtagtccacagtgtctattgtgtctcatatttatgtccatacgtgctcaatgcttagcttccatttataagtgagaacatgtggtatttggttttctgtttctgcattcatttgcttagatcgcc-ccagctccatctatgttgctgcaaagaatatgattttattc-ttttttatggc-----gtatttcatggtgtatatgtaccac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112745747 426 + 115148730 CTCAAACCAAATATGTA-TTTTTATTGTATAGGGCTTTTTCTTTTCT-AAAAAAtttcaacttgcaatttagatataggaggtacgtgggcagatttgttacaatggactattgcgtgatgctgaggtttgaagtatggatcccgtcaccctggtagtgagcatagtgcctgataggtagtcttttttaacctaacc--------tccctccctccctccaccatctagtagtccacagtgtctattgtgtctcatatttatgtccatacgtgctcaatgcttagcttccatttttaagtgagaacatgtggtatttggttttctgtttctgcattcatttccttagatggcctccagctccatctatgttgctgcaaagaatatgattttattc-ttttttatggcatatagtatttcatggtgtatatgtaccac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189032268 436 + 190429646 CTCAAACTAAATATGTCTTTTTTATTGTATGGGGTTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaagtacataggcagatttgttgcaatggactattgcatgacgctgaggtttgaagtgtggatcccgtcaccctggtggtgagcgtagtacccagtagatggtcttttttaacctaatctcgcttcctctcttccttcctccaccatctagtagtccccagtgtctactgcttttcatatctatgtccatatgtgctcaatgcttagctttcatttataagtgagaacatgtggtatttggtttcctgtttctgcatttattcacttagatggcctccagctccatctatgttgctgtgaagaatatgattttattc-atctttatggtgtatggtatttcagggtgtgtatgtaccac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187975145 436 + 189454096 CTCAAACTAAATATGTCTTTTTTATTGTATAGGGTTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaagtacataggcagatttgttgcaatggactattgcatgacgctgaggtttgaagtgtggatcccgtcaccctggtggtgagcgtagtacccagtagatggtcttttttaacctaatctcgcttcctctcttccttcctccaccatctagtagtccccagtgtctactgcttttcatatctatgtccatatgtgctcaatgcttagcttccatttataagtgagaacatgtggtatttggtttcctgtttctgcatttattcgcttagatggcctccagctccatctatgttgctgtgaagaatatgattttattc-gtctttatggtgtatggtatttcagggtgtgtatgtaccac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24366461 436 - 25927173 CTCAAACTAAATATGTCTTTTTTATTGTATAGGGTTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaagtacataggcagatttgttgcaatggactattgcatgacgctgaggtttgaagtgtggatcccgtcaccctggtggtgagcgtagtacccagtagatggtcttttttaacctaatctcgcttcctctcttccttcctccaccatctagtagtccccagtgtctactgcttttcatatctatgtccatatgtgctcaatgcttagcttccatttataagtgagaacatgtggtatttggtttcctgtttctgcatttattcgcttagatggcctccagctccatctatgttgctgtgaagaatatgattttattc-atcttcatggtgtatggtatttcagggtgtgtatgtaccac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3396031 435 + 4669795 CTCAAACTAAATATGTCTTTTTTATTGTATAGGGTTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaggtacataggcaga-ttgttgcaatggactattgcatgacgctgaggtttgaagtgtggatcccgtcaccctggtggtgagcgtagtacccagtaggtggtcttttttaacctaatctcgcttcctctcttccttcctccaccatcgagtagtccccagtgtctactgcttttcatatctatgtccatatgtgctcaatgcttagcttccatttataagtgagaacatgtggtatttggtttcctgtttctgcatttattcgctcagatggcctccagctccatctatgttgctgtgaagaatatgattttattc-gtctttatggtgtatggtatttcagggtgtgtatgtaccac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134353578 436 + 135778131 CTCAAACTAAATATGTCTTTTTTAATGTATAGGGTTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaggtacataggcagatttgttgcaatggacgattgcatgacgctgaggtttgcagtgtggatcctgtcatcctggtggtgagcatagtacccagtaggtggttttttttaacctaatctcgcttcctctcttccttcctccaccatctagtagtccccagtgtctactgcttttcatatttatgtccgtatgtgctcaacgcttagcttccatttataagtgagaacatgtggtatttggttttctgtttctgcatttattctcttaggtggcctccagctccatctatgttggtgcgaagaatatgattgtattc-gtctttatggtgtatggtatttcagggtgtgtatgtatcac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2816106 436 - 2847728 CTCAAACTAAATATGTCTTTTTTATTGTATAGGATTTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaggtacataggcagatttgttgcaatggactattggatgacgctgaggtttgcagtgtggatcctgtcaccctggtggtgagcgtagtacccagtaggtggtcttttttaacctaatctcgcttcctctcttccttcctccaccatctagtagtccccagtgtctactgcttttcatatctatgtccatatgtgctcaatgcttagcttccatttataagtgacaacatgtggtatttggtttcctgtttctgcatttattcgcttagatggcctccagctccatctatgttgctgtgaagaatatgattttattc-gtctttatggtgtatggtatttcagggtgtgtatgtaccac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 916706 435 + 2368649 CTCAAACCAAATATGTC-TTTTTATTGTATAGGGTGTTTTCTTTTTTGAAAAAAtttcaacttgcaatttagatataggaggtacaagggcagatttgttgcaatggactattgcatgacgctgagattcaaagtgtggatcccgtcaccctggtggtgagcatagtacccagtagctggtcttttttaacctaatctcgcttcctctcgtccttcctccaccatctagtagtccccagcgtctactgcttttcgtatttatgtccatatgtgctcaatgcttagcttccatttataagtgagaacatgtgctatttggctttctgtttctgcgtttattcgcttagatggcctccagctgcatctatgttgctgcgaagaatatgattttattc-gtctttatggtgtgtggtgtttcagggtgtgtatgtaccac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189650350 368 - 190850796 CTCAAACCAAACA----TTTTTTATTGTATAAGGTTTTTtctttttt-aaaaattttcagccttcaatttagatacaggaggtacaagggcagatctgtcacagtggactgttgcctgctggtgaggtttgaagtatggatcctgtcaccctggtagggagcacagtacccaagaggtagtttt-cttagcct---ccc------------cctcccctcaccatctagtagtcctcagtgtctattgcttcccatgtttatgtctgcaggtgctcagtgcttagcttccatttac----------------------------------------------cctagatggcctccagctctatc-atgttgctgcaaagaatatgatttgattc-ttttttacagggtacggtatttcacggtgtctatgtaccac i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1032142 419 - 2196201 CTCAAATCAAACAT---TTTTTTATTGCATAAGTTTTTTTCTTTTTT-AAAAGAtttcaactttcaatttagatacaggaggcacaagggcagatttgtcacagtggactgttgcctgctgctgaggtttgaagtatgcatcccgtcaccctggtagtgagcacagtccccaagaggtagtttt--ttaacctagcccc------------cttccctccaccatccagtagtccacagtgtctattgtttcccatatttatgtccgtaggtgcgcaatccttagcttccatttacaagtgagaacatgtggtatttggttttctgtttctgcattaatttgcctagatggcctccagctccatctatgttgctgcaaagaatatgattttattctttttttaaggggtatagaatttcatggtgtatatggaccac i cebCap1.NW_016107886v1 C 0 I 1196 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13142450 0 - 14256875 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=7320401.000000 s hg38.chr4_KI270789v1_alt 147483 1161 + 205944 attttctttgtccaatttcctactgatggtcgcctgtgtggattccatgtctttgctattgtgaatagtgatgcagtggacatctgagtgtaaatgtgtttttggcagaatgatttattttcttttgagtgtatacccagtaatgggattgctgagtcaaatggtagctttgttttaagttttgagaaatct-ccagactgc-ttcctcagtggattggtctaatttacattcccactaacagcgtataagctttcccttttctctgcaatgttgccagcatctgtttttttgactttttataatagccattctgactggtatgagatggtatctcattgtggttttgatttggatttctctgatgattagcgatgctgagcattttttcacacatttgatgtatgtcttctttg---agaaatgtctgttcatgtctttgcccatcttttaatggggttaattgggttttgtttgttcaactgtttaagttccctatagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccattccctagactgcctgtttactgtgctgatttttactctctgtttattttgctatgtaaaagttctggagtttaattaggtcccacttgtcccgtttttgtttttgttgcaagtgcttttggggacttagctaaaaattatttgccaaggctgatgtccagaagaatgtatcctaggttgccttccagaatttttatagtttgaggtcttacatttaaatctttaatgtattttcagttaatttttgtatgaggtgaaacggaggggtccagtttcattctgctacatatggctagccagttatcccagctgtgtttattgaatagggagttc-tttcccattgcttgtttttgttggccttgtcaaagatcagatggttgttggtatgtagctttatttgtttgttttctattcttttgcattggtctatgtgtctgtttctgtaacagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggctttctttggctgttcaggctctttttggttcaatacaaattttagagtagttttctaattttagtaaattttcta-a s panTro5.chr4 192934563 1161 + 194502333 attttctttgtccaatttcctactgatggtcgcctgtgtggattccatgtctttgctattgtgaatagtgatgcagtggacatctgagtgtaaatgtgtttttggcagaatgatttattttcttttgagtgtatacccagtaatggaattgctgggtcaaatggtagctttgttttaagttttgagaaatct-ccagactgc-ttcctcagtggattggtctaatttacattcccactaacagcgtataagctttcccttttctctgcaatgttgccagcatctgtttttttgactttttataatagccattctgactggtatgagatggtatctcattgtggttttgatttggatttctctgatgattagcgatgctgagccttttttcacatatttgatgtatgtcttctttg---ataaatgtctgttcatgtctttgcccatcttttaatggggttaattgggttttgtttgttcaactgtttaagttccctatagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccattccctagactgtctgtttactgtgctgatttttactctctgtttattttgctatgtaaaagttctggagtttaattaggtcccacttgtcccatttttgtttttgttgcaagtgcttttggggacttagctaaaaattatttgccaaggctgatgtccagaagaatgtttcctaggttgccttccagaatttttatagtttgaggtcttacatttaaatctttaatgtattttcagttaatttttgtatgaggtgaaacggaggggtccagtttcattctgctacatatggctagccagttatcccagctgtgtttattgaatagggagttc-tttcccattgcttgtttttgttggccttgtcaaagatcagatggttgttggtatgtagctttatttgtttgttttctattcttttgcattggtctatgtgtctgtttctgtaacagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggctttctttggctgttcaggctctttttggttcaatacaaattttagagtagttttctaattttagtaaattttcta-a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192818216 1161 + 195804263 attttctttgtccaatttcctactgatggtcgcctgtgtggattccatgtctttgctattgtgaatagtgatgcagtggacatctgagtgtaaatgtgtttttggcagaatgatttattttcttttgagtgtatacccagtaatggaattgctgggtcaaatggtagctttgttttaagttttgagaaatct-ccagactgc-ttcctcagtggattggtctaatttacattcccactaacagcgtataagctttcccttttctctgcaatgttgccagcatctgtttttttgactttttataatagccattctgactggtatgagatggtatctcattgtggttttgatttggatttctctgatgattagcgatgctgagcattttttcacatatttgatgtatgtcttctttg---agaaatgtctgttcatgtctttgcccatcttttaatggggttaattgggttttgtttgttcaactgtttaagttccctatagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccattccctagactgtctgtttactgtgctgatttttactctctgtttattttgctatgtaaaagttctggagtttaattaggtcccacttgtcccatttttgtttttgttgcaagtgcttttggggacttagctaaaaattatttgccaaggctgatgtccagaagaatgtttcctaggttgccttccagaatttttatagtttgaggtcttacatttaaatctttaatgtattttcagttaatttttgtatgaggtgaaacggaggggtccagtttcattctgctacatatggctagccagttatcccagctgtgtttattgaatagggagttc-tttcccattgcttgtttttgttggccttgtcaaagatcagatggttgttggtatgtagctttatttgtttgttttctattcttttgcattggtctatgtgtctgtttctgtaacagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggctttctttggctgttcaggctctttttggttcaatacaaattttagagtagttttctaattttagtaaattttcta-a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3855469 1160 + 4876863 attttctttgtccagtttcctactgatggtcgcctgtgtggattccatgtctttgctattgtgaatagtgatgcagtggacatctgagtgtaaatgtgtttttggcagaatgatttattttcttttgagtgtataaccagtaatgggattgctgggtcaaatggtagctttgttttaagttttgagaaatct-ccagactgc-ttcctcagtggattggtctaatttacattcccactaacagtgtataagctctcccttttctctgcaatgttgccagcatctgtttttttgactttttataatagccattctgactggtatgagatggtatctcattgtggttttgatttcgatttctctgatgattagcaatgctgagcattttttcacacatttgatgtatgtcttctttg---agaaatgtctgttcatgtctttgcccatcttttaatggggttaattgggttttgtttgttcaactgtttaagttccctatagattctggatattaggcctttgtcaggtgcatactttgcaaatatctcctcccattccctagactgtctgtttactgtgctgatttttactctctgtttattttgctatgtaaaagttctggagtttaattaggtcccacttgtcccgtttttgtttttgttgcaagtgcttttggggacttagctaaaaattatttgccaaggctgatgtccagaagaatgtttcctaggttgccttccagaatttttatagtttgaggtcttacatttaaatctttaatgtattttcagttaatttttgtatgaggtgaaacggaggggt-cggtttcattctgctacatatggctagccagttatcccagatgtgttgattgaatagggagttc-tttcccattgcttgtttttgttggccttgtcaaagatcagatggttgtttgcatgtagctttatttgtttgttttctattcttttgcattggtctatgtgtctgtttctgtaacagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggctttctttggctgttcaggctctttttggttcaatacaaattttagagtagttttctaattttagtaaattttcta-a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112746173 1157 + 115148730 attttctttgtcctgtttcctactgatggttgcctgtgtggattccatgtctttgctattgtgaatactgatgcagtggacgtctgagtgtacatgtgtttttggcagaatgatttattttgttttgagtgtatacccagtaatgggattgctcagtcaaatggtagctttcttttaagttttgagaaatctcccagactgc-ttcctcagtggattggtctaatttacattcccactaacagcgtacaagctttcccttttctccacaatgttgccagcatctgtttttttgactttttataatagccattctgactggtatgagatggtatctcactgtggttttgatttggatttctctgatgattagtgatgctgagaattttttcatgcatttgatgtatgtcttctttg---agaagggtctgttcatgtctttgcccatcttttaatggggttaattgggttttgtttgttcaactgtttaagttccctatagattctggatattaggcctttgtcaagtgcatactttgtgaatatctcctcccattccctagactgtctgtttactctgctgatttttactctc-gtttattttgctttgtaaaagttctggagtttaattaggtcccacttgtccattttttgtttttgatgcaagtgctttcggggacttagctaaaaattatttgccaaggctgatgtctggaagaatgtttcctaggttgccttccagaatttttatagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttgtatgaggtgaaagggaggggtccagtttcatccttctacacatggctagccagttatcccagctgtgtttattgaatagggaattc-tttcccattgcttgtttttgtcggccttgtcaaagatcagatgggtgtagctatgtagctttattggtgagttttctattcttttgcattgctctatgtgtctg----cgtagcagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgctttggctgttcaggctctttttggttcaatacaaattttagagtagttttctaattttagtaaactttcta-a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189032704 1142 + 190429646 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtgtacacccagtaatggggttgctgagtcaaatggtggc-----tttaagttttgagaaatct-ccggactacttttcacagtggattggactaatttaccttcccactaacagcgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggctttgatttggatttctctgctgattagtgatgctgagcattttttcatgcatttgatgtatgtcttctttg---agaagtgtctgttcatgtc--tgcccgtgttttaacggaattaattgggttttgtttgttcaactgtttaagttccttgtagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccatttcctagactgtccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgtttttgttgcaagtgcttttgaggacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttatatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcctggctgtgtttattgaatagggagttc-tttcttgtggcttgtttttgtgggtcttgtcaaagatcagatggttgtaggtatgtagctttatttgcttgttttctattctgttgcattggtctatgtgtctgtttctgctacagcaccatgctgttttggttactgtggctttatcgtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgcgttggctgttcaggctctttttggttcgatacaaattttagaatagttttctaattttagtaaattttcta-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187975581 1142 + 189454096 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtgtacacccagtaatggggttgctgagtcaaatggtggc-----tttaagttttgagaaatct-ccggactacttttcacagtggattggactaatttaccttcccactaacagcgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggctttgatttggatttctctgctgattagcgatgctgagcattttttcatgcatttgatgtatgtcttctttg---agaagtgtctgttcatgtc--tgcccgtgttttaacggaattaattgggttttgtttgttcaactgtttaagttccttgtagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccattccctagactgtccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgtttttgttgcaagtgcttttgaggacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttatatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcctggctgtgtttattgaatagggagttc-tttcctgtggcttgtttttgtgggtcttgtcaaagatcagatagttgtaggtatgtagctttatttgcttgttttctattctgttgcattggtctatgtgtctgtttctgctacagcaccatgctgttttggttactgtggctttatcgtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgcgttggctgttcaggttctttttggttcgatacaaattttagaatagttttctaattttagtaaattttcta-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24366897 1142 - 25927173 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtgtacacccagtaatggggttgctgagtcaaatggtggc-----tttaagttttgagaaatct-ccggactacttttcacagtggattggactaatttaccttcccactaacagcgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggctttgatttggatttctctgctgattagcgatgctgagcattttttcatgcatttgatgtatgtcttctttg---agaagtgtctgttcatgtc--tgcccgtgttttaacggaattaattgggttttgtttgttcaactgtttaagttccttgtagattctggatattaggcctttgtcaggtgcatactttgcgaatatctcctcccattccctagactgtccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgtttttgttgcaagtgcttttgaggacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttatatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcctggctgtatttattgaatagggagttc-tttcctgtggcttgtttttgtgggtcttgtcaaagatcagatggttgtaggtatgtagctttatttgcttgttttctattctgttgcattggtctatgtgtctgtttctgctacagcaccatgctgttttggttactgtggctttatcgtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgcgttggctgttcaggctctttttggttcgatacaaattttagaatagttttctaattttggtaaattttcta-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3396466 1142 + 4669795 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtatacacccagtaatggggttgctgagtcaaatggtgac-----tttaagttttgagaaatct-ccagactacttttcacagtggattggactaatttaccttcccactaacagcgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggttttgatttggatttctctgctgattagcgaagctgagcattttttcacgcatttgatgtatgtcttctttg---agaagtgtctgttcatgtc--tgcccgtattttaacggaattaattgggttttgtttgttcaactgtttaagttccttgtagattctggatattaggcctttgtcaggtgcatactttgcaaatatctcctcccattccctagactgtccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgtttttgttgcaagtgcttttgaggacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttatatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcccagctgtgtttattgaatagggagttc-tttcctgtggcttgtttttgtgggtcttgtcaaagatcagatggttgtaggtatgtagctttatttgcttgttttctattctgttgcattggtctatgtgtctgtttctgcaacagcaccatgctgttttggttactgtggctttatcgtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgctttggctgttcaggctctttttggttcgatacaaattttagaatagttttctaattttagtaaattttcta-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134354014 1146 + 135778131 atgttctttgtccaatttcctactgatgggcacctgtgtggattcc-----------cttgtgaatactgatgccgtggacat-ggagtgtacatgtgtttttgacagaatgatttattttcgtttgagtgtacacccagtaatgggattgctgagtcgaatggtggctttgttttaagttttgagaaatct-ccggactacttttcacagtggattggactaatttaccttcccactaacagtgtat-agcgttcccttttctctgcaatctcggcagcatctgtttctttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggttttgatttggatttctctgctgattagcgatgctgagcattttttcacgcatttgatgtatgtcttctttg---agatgtgtctgttcatgtc--tgcctgtattttaatggggttaattaggttttgtctgttcaactgtttaagttccttatagattctggatattaggcctttgtcaggtgcatactttgcaaatatctccctccattccctagactgcccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttctgtttttgttgcaagtgcttttgaagacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttgtatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcccagctgtgtttattgaatagggagttc-tttcctgtggcttgtttttgttggtcttgtcaaagatcagatggttgtaggtatgtagctttatttgcttgttttctattctgttgcgttggtctatgtgtctgtttctgcaacagcaccatgctgttttggttactgtggctttatagtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgctttggctgttcaggctctttttggttcaattcaaattttagaatagttttctcattttagtaaattttcta-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2816542 1142 - 2847728 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtgtacacccagtaatggggttgctgagtcaaatggtggc-----tttaagttttgagaaatct-ccagactacttttcacagtggattggactaatttaccttcccactaacagcgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgtggttttgatttggatttctctgctgattagcgatgctgagcattttttcacgcatttgatgtatgtcttctttg---agaagtgtctgttcatgtc--tgcccgtattttaacggaattaattgggttttgtttgttcaactgttaaagttccttgtagattctggatattaggcctttgtcaggtacatactttgcgaatatctcctcctattccctagactgtccatttactctgctgatttttaccctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgtttttgttgcaagtgcttttgaggacttaactaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaatgtattttgagttaatttttatatgaggtgaaaggtaggggtccagtttcattcttctacatatggctagtcagttatcccagctgtgtttattgaatagggagttc-tttcctgtggcttgtttttgtgggtcttgtcaaagatcagatggttgtcggtatgtagctttatttgcttgttttctattctgttgcattggtctatgtgtctgtttctgcaacagcaccatgctgttttggttactgtggctttatcgtatagtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgctttggctgttcaggctctttttggttcgatacaaattttagaatagttttctaattttagtaaattttcta-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 917141 1148 + 2368649 atgttctttgtccagtttcctactgacgggcacctgtgtggattcc-----------attgtgaatactgatgccgtggacatgggagtgtacatgtgtttttggcagaatgatttattttcgtttgagtgtatacccagtaatgggattgctgagtcaaatggtggctttgttttaagttttgagaaatct-ctggactacttttcacagtggattggactaatttaccttcccactaacagtgtat-agcgttcccttttctccgcaatctcgccagcatctgtttttttgactttttgtaatagacattctgactggtatgagatggtgtctcattgcggttttgatttggatttctctgctgattagtgatgctgagcattttttcacgcatttgatgtatgtcttctttg---agatgtgtctgttcatgtc--tgcctgtattttaatggggttaattgggttttgtttgttcaactgtttaagttccttatagattctggatattaggcctttgtcaggtgcatactttgcgaatatttcctcccattccctagactgtccatttactctgctgatttttactctctgtttattttgctttgtaaaagttcttgagtttaattaggtcccacttgtccattttttgttttcgttgcaagtgcttttgaggacttagctaaaatttatttgccaaggctgatgtccagaagaatgtttcctgggttgccttccagaatttttacagtttgaggtcttacatttaaatctttaacgtatttggagttaatttttgtatgaggtgaaaggtaggggtccagcttcattcttctacatatggctagtcagttatcccagctgtgtttattgaatagggagttc-tttcctgtggcttgtttttgttggtcttgtcaaagatcagatggttgtaggtgtggagctttatttgcttgttttctattctgtcgcgttggtctctgtgtctgtttctgcaacagcaccatgctgttttgcttactgtggctttatagtatggtatgaggttggaaagagtgatgcctctggcattgttctttttgcttaggcttgctttggctgttcaggctctttttggttcaatacaaattttagaatagttctctaattttAGTAAGTGTTCTAA- i colAng1.NW_012116221v1 C 0 M 1310 s calJac3.chr3 189650718 1141 - 190850796 attttctttatccagtttcttaccgaggggcacctgtgtggattccacgtctttgccattgtgaatagcgatgcagtggacatctgagtggacgtgtgttttcggcaggacgatttgtcttcttgtgggtgtatacccagtaatgggattgctgagtcaaatggtagctttgtcttaagttttgagaaatct-ccggactgcttttcacagtggactggactagtttacgttcccactgacggtgtataagcgtctccttcactccgcaaccttggcagcgtctgattttttgactttttacagcagccgttctgaccggtctgagaggatacctcactgtggttttgatttggatttctctgatgagtagggatgccgagcgtttgtccacacattggatgcatgtcccctttgagaagaagtgtctgttcacgtctttgcctgtgatttactggggttagtcgggtttcgtttgttcaactgtttaagttccctatagattctagatcttaggcctttgtcggaggcacgctttgcaaagatcttctcccgttctctagactgtctgtttactttgctaatctttcctttctccttgtttca-tatgtgaaatttcctcagtttaattaggtcccacttgtccg--ttttgtttttgttgcaagtgcttttggggacttagctaaaaattctttgccaaggcagatgaacagaagagtatttcctaggttgtcttccagaatttttatagtttaaggtcttacatttaaatctttaatgtattttgagttaatttttgcatgtggtgaaaggtaggggtccagtttcacttgtgtacatatggctagccagttatcccagctgtttttattgaatagagagttcttttcccattgcttgtttttgtcagccttgtcaaagatcagatggttgtaggtaggtagctttatttgtgagttttctattcttttgccttggtgtatgtgtctgtttttgtaatagcaccatgctgttttggttactgtggctttataatatagcatgaggttgaaaagagtgattcctctggcattgctgtttttgcttaggattgctttggctggtcaggctctttttggttcaacatgaatattagagtagtatt----------------------- i calJac3.chr3 C 0 C 0 e cebCap1.NW_016107886v1 1032561 1196 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13142450 0 - 14256875 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1420179.000000 s hg38.chr4_KI270789v1_alt 148644 273 + 205944 agtaaatgttctaatcctgtgaagaatgacgttggtaatttgataggtatagcattgaatctgtaaagtgctttgagcaatacggccatttttacaatagtggttttggtactgaaacaccaggtgctcagtcta----ggtcctgctgcttgctgcacagaaagccaatgactgagacagcaagtattgccaaggaagaag-ctttaatccgatgctgcagcagaggaggtgggaactcagtctcaaatccatctctctgacctactaaaaccaggg s panTro5.chr4 192935724 273 + 194502333 agtaaatgttctaattctgtgaagaatgacgttggtaatttgataggtatggcattgaatctgtaaagtgctttgagcaatacggccatttttacaatagtggttttggtactgaaacaccaggtgctcagtcta----ggtcctgctgcttgctgcacagaaagccaatgactgagacagcaagtattgccaaggaagaag-ctttaatccggtgctgcagcagaggaggtgggaactcagtctcaaatccatctctctgacctactaaaaccaggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192819377 273 + 195804263 agtaaatgttctaattctgtgaagaatgacgttggtaatttgataggtatagcattgaatctgtaaagtgctttgagcaatacggccatttttacaatagtggttttggtactgaaacaccaggtgctcagtcta----ggtcctgctgcttgctgcacagaaagccaatgactgagacagcaagtattgccaaggaagaag-ctttaatccggtgctgcagcagaggaggtgggaactcagtctcaaatccatctctctgacctactaaaaccaggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3856629 269 + 4876863 agtaaatgttctaattctgtgaagaatgacattggtaatttgataggtatagcattgaatctgtaaagtgctttgagcaatacggccatttttacaatagtggttttggtactgaaacaccaggtactcagtcta----ggtcctgct-cttgctgcacagaaagccaatgactgagacagcaagtattgccaag---gaag-ctttaatccggtgctgcagcagaggagatgggaactcagtctcaaatccatctctctgacctactaaaaccaggg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112747330 273 + 115148730 agtaaatgttctaattctgtgaagaatgatgttggtagtttgataggtacagcattgaatctgtaaagtgctttgagcaatacggccatttttacaatagtggttttggtactgaaacgccagctgctcagtcta----ggtcctgctgcgtgccgcacagaaagccaatgactgagacagcaagtattgccaaggaagaag-ctttaatccggtgctgcagcagaggagatgggaactcagtctcaaatccgtctctctgacctactgaaaccaggg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189033846 270 + 190429646 agtgaatgttctaattctgtgaagagtgacgttggtagtttgataggtatggcattgaatctgt--agtgttttaggaaatatggccattttgacagtagtggttTtggtaccaaaacaccaggtgctcagtcta----ggtcctgctgctcgctgcacagaaagccaatgactgagacaacgaatatt-ccagggaagaag-ctttaatcctgtgctgcagcagaggagagaagaactcagtctcaaatccatctctctgacctactaaaaccaggg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187976723 271 + 189454096 agtgaatgttctaattctgtgaagagtgacgttggtagtttgataggtatggcattgaatctgt--agtgttttaggaaatatggccattttgacagtagtggttttggtaccaaaataccaggtgctcagtcta----ggtcctgctgctcgctgcacagaaagccaatgactgagacaacgaatattgccagggaagaag-cttcaatcctgtgctgcagcagaggagagaagaactcagtctcaaatccatctctctgacctactaaaaccaggg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24368039 270 - 25927173 agtgaatgttctaattctgtgaagagtgacgttggtagtttgataggtatggcattgaatctgt--agtgttttaggaaatatggccattttgacagtagtggttTtggtaccaaaacaccaggtgctcagtcta----ggtcctgctgctcgctgcacagaaagccaatgactgagacaacgaatatt-ccagggaagaag-ctttaatcctgtgctgcagcagaggagagaagaactcagtctcaaatccatctctctgacctactaaaaccaggg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3397608 273 + 4669795 agtgaatgttctaattctgtgaagagtgacgttggtagtttgataggtatggcattgaatctgtaaagtgttttaggaaatatggccattttgacagtagtggttTtggtaccaaaacaccaggtgctcagtcta----ggtcctgctgctcgctgcacagaaagccaatgactgagacaacgaatattgccagggaagaag-ctttaatcctgtgctgcagcagaggagagaagaactcagtctcaaatccatctctctgacctactaaaaccaggg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134355160 270 + 135778131 agtaaatgttctaattctgtgaagaatgac---ggtagtttgataggtatagcattgaatctgtaaagtgttttaggaaatatggccattttgacagtagtggttTtggtaccagaacaccaggtgctcagtcta----ggtcctgctgctcgctgcacagaaagccaatgactgagacaacgaatattgccagggaagaag-ctttaatcccgtgctgcagcagaggagacgagaactcagtctcaaatccatctctctgacctactaaaaccaggg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2817684 273 - 2847728 agtgaatgttctaattctgtgaagagtgacgttggtagtttgataggtatcgcattgaatctgtaaagtgttttaggaaatatggccattttgacagtagtggttttggtaccaaaacaccaggtgctcagtcta----ggtcctgctgctcactgcacagaaagccaatgactgagacaacgaatattgctagggaagaag-ctttaatcctgtgctgcagcagaggagagaagaactgagtctcaaatccatctctctgacctactaaacccaggg i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189651859 264 - 190850796 --------ttctaattctgtgaagaatgacgttggtagtttgataggt-----attgaatttgtaaactgctttggacgatatggtcatttttacaatagtggttTtgctactgaaacaccaggggctcagtctaggtgggtcctgctgctctccagacagaaaggcaatgacttagatgatgcatattgccaagaaagatgactttaatccagcactgcagctgaggatgtgagaactcagtc-aaaatctgcctctctgaactactaaaactaagg i calJac3.chr3 C 0 I 911 e cebCap1.NW_016107886v1 1032561 1196 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13142450 0 - 14256875 C e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=176940.000000 s hg38.chr4_KI270789v1_alt 148917 37 + 205944 atttatataacaaggaaggaatgtaacattgtgtaag s panTro5.chr4 192935997 37 + 194502333 atttatataacaaggaaggaatgtaacattgtgtaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192819650 37 + 195804263 atttatataacaaggaaggaatgtaacattgtgtaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3856898 37 + 4876863 gtttatataacaaggaaggaatgtaacattgtgtaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112747603 37 + 115148730 gtttatatagcagggaaggaatgtaacattgtgtaag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034116 37 + 190429646 gtttatatagcagggaaggaatgtaatattgtgtaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187976994 37 + 189454096 gtttatatagcagggaaggaatgtaatattgtgtaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24368309 37 - 25927173 gtttatatagcagggaaggaatgtaatattgtgtaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3397881 37 + 4669795 gtttatatagcagggaaggaatgtaatattgtgtaag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134355430 37 + 135778131 gtttatatagcagggaaggaatgtaatattgtgtaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2817957 37 - 2847728 gtttatatagcagggaaggaatgtaatattgtgtaag i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e cebCap1.NW_016107886v1 1032561 1196 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13142450 0 - 14256875 C e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=863428.000000 s hg38.chr4_KI270789v1_alt 148954 155 + 205944 aaaacaggaactagggaggtgtcaggaagcaatcgcgatgaatgaggggtccaacatttcattgtctggatgtgatgatctactgagtttcagttctttgacactttttgtgagaggcctgaaggtcatttcctcaggaaggaactcagataaaa s panTro5.chr4 192936034 155 + 194502333 aaaacaggaactagggaggtgtcaggaagcaatcgcgatgaatgaggggtccaacatctcattgtctggatgtgatgatctactgagtttcagttctttgacactttttgtgagaggcctgaaggtcatttcctcaggaaggaactcagataaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192819687 155 + 195804263 aaaacaggaactagggaggtgtcaggaagcaatcgcgatgaatgaggggtccaacatctcattgtctggatgtgatgatctactgagtttcagttctttgacactttttgtgagaggcctgaaggtcatttcctcaggaaggaactcagataaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3856935 155 + 4876863 aaaacaggaactagggaggtgtcaggaagcaatcacgatgaatgaggggtccaacatctcattgtctggatgtgatgatctgctgagtttcagttctttgacactttttgtgagaggcctgaaggtcatttcctcaggaaggaactcagataaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112747640 155 + 115148730 aaaacaggaactagggaggtgtcaggaagcagtcgcgatgaatgaggggtccagcatctcattgtctggatgtcatgatctagcgagtttcagttctttgatgctttttgtgagaggcccgaaggtcatttcctcaggaaggaactcagataaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034153 155 + 190429646 aaaacaggaactagggaggtgtcaggaagcaatcgtgatgaatgaggggtcaagcatctcattgtctggatgtcatgatctagtgagtttcagttctttgatactttttgtgacaggcctgacagtcattttctcaggaaggaactcagataaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187977031 155 + 189454096 aaaacaggaactagggaggtgtcaggaagcaatcgtgatgaatgaggggtcaagcatctcattgtctggatgtcatgatctagtgagtttcagttctttgatactttttgtgacaggcctgacagtcattttctcaggaaggaactcagataaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24368346 155 - 25927173 aaaacaggaactagggaggtgtcaggaagcaatcgtgatgaatgaggggtcaagcatctcattgtctggatgtcatgatctagtgagtttcagttctttgatactttttgtgacaggcctgacagtcattttctcaggaaggaactcagataaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3397918 155 + 4669795 aaaacaggaactagggaggtgtcaggaagcaatcgtgatgaatgaggggtcaagcatctcattgtctggacgtcatgatctagtgagtttcagttctttgacactttttgtgacaggcctgacagtcattttctcaggaaggaactcagataaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134355467 155 + 135778131 aaaacaggaactagggaggtgtcaggaagcaatcgtgatgaatgaggggtccagcatctcattgtctggatgtgatgatctagtgagtttcagttctttgatactttttgtgacaggcctgacagtcatttcctcaggaaggaactcagataaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2817994 154 - 2847728 aaaacaggaactagggaggtgtcaggaagcaattgtgatgaatgaggggtcaagcatctcattgtctggatgtcatgatctagcgagtttcagttc-ttgatactttttgtgacaggcctgacagtcattttctcaggaaggaactcagataaaa i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1033757 155 - 2196201 aaaacaggaactaagaaggagcaaagaagcagtcatgatgaatgagaggtctggtatctcattgcatggatgtggtgatctggtgagtttcagttctttaatactttttgtgagaggcctgaaggtcatttcctgaggaaggaactcagataaaa i cebCap1.NW_016107886v1 I 1196 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e saiBol1.JH378165 13142450 0 - 14256875 C e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=2045837.000000 s hg38.chr4_KI270789v1_alt 149109 354 + 205944 caaatataagtttcaagctttaagaccagaagggtcaatttctatgtttattaa----------------------------------------aaagaaaaaaactgttagactgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcacgaggtcaagagattgagaccatcctggccaacatggtgaagcatcatgtctactaaaaatacaaaaattagccaggcatggtggcacacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcggagagtgcagtgaactgagattgcaccactgcactccagcct-ggtgacagagcgatactccatctcaaaa s panTro5.chr4 192936189 354 + 194502333 caaatataagtttcaagctttaagaccagaagggtcaatttctatgtttattaa----------------------------------------aaagaaaaaaactgttagactgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaagcatcatgtctactaaaaatacaaaaattagccaggcatggtggcacacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcggagggtgcagtgaactgagattgcaccactgcactccagcct-ggtgacagagcgatactccatctcaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192819842 354 + 195804263 caaatataagtttcaagctttaagaccagaagggtcaatttctatgtttattaa----------------------------------------aaagaaaaaaactgttagactgggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaagcatcatgtctactaaaaatacaaaaattagccaggcatggtggcacacgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcggagggtgcagtgaactgagattgcaccactgcactccagcct-ggtgacagagcgatactccatctcaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857090 354 + 4876863 caaatgtaagtttcaagctttaagaccagaagggtcaatttctatgtttattaa----------------------------------------aaagaaaaaaacagttagactgggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacatggtgaagcatcatgtctactaaaaatacaaaaattagccaggcatggtggcacacgcctgtaatcccagctacttgggaggctgaggcaggagaatggcttgaacctgggaggcggagggtgcagtgaactgagattgcaccactgcactccagcct-ggtgacagagcgatactccatctcaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112747795 353 + 115148730 caaatataagtttcaagctttaagaccagaagggtcaatttctatgtttattaa----------------------------------------aaagaaaaaaactgttaggctgggcatggtggctcatgcctgtaatcccagcagtttgggagaccgaggcaggcagatcatgaggtcaagagatcgagaccatcctggctaacatggtgaaacatcatctctactaaaaatataaaaattagctaggcatggtggcacacgcctgtaatcccaggtacttgggaggctgaggctggagaatcgc-tgaacccgggaggtggagagtgcagtgaactgagatcgcaccactgcactccagcct-ggtgacagagtgagactccatctcagaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034308 367 + 190429646 caaatacaagtttcaagctttaagcccagaagggtcaattactatgtttattaaaaacaaacaaacaAAC--------------------AAAAATACAAAAAAACTGTTAggccaggcatggtggctcacgcctgtaatcctagcactttgggaggctgagatgggcagttcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattatctgggtgtggtgg----cacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccagaaagcaaaggttgcagtgagctgagctcgcaccagtgcactccagcctgggcgacagag----actccatctcaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187977186 363 + 189454096 caaatacaagtttcaagctttaagccccgaagggtcaattactatgtttattaaaaacaaacaaacaaac------------------------aaacaaaaaaactgttaggccaggcatggtggctcacgcctgtaatcctagcactttgggaggctgagatgggcagttcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattatctgggtgtggtgg----cacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccagaaagcaaaggttgcagtgagctgagctcgcaccagtgcactccagcctgggcgacagag----actccatctcaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24368501 375 - 25927173 caaatacaagtttcaagctttaagcccagaagggtcaattactatgtttattAAaaacaaacaaacaaac------------aaacaaacaaaaaaacaaaaaaacTGTTAggccaggcatggtggctcacgcctgtaatcctagcactttgggaggctgagatgggcagttcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattatctgggtgtggtgg----cacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccagaaagcaaaggttgcagtgagctgagctggcaccagtgcactccagcctgggcgacagag----actccatctcaaaa i macNem1.NW_012013133v1 C 0 I 31 s cerAty1.NW_012001672v1 3398073 391 + 4669795 caaatacaggtttcaagcttgaagcccagaagggtcaattactatgtttattAAaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaaaaacaaaaaaacTGTTAggccaggcatggtggctcacgcctgtaatcccagcactttgggaggctgagatgggcagatcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcgcacgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccagaaagcaaaggttgcagtgagctgagctcgcaccagtgcactccagcctgggcgacagag----actccatctcaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134355622 357 + 135778131 caaatataagtttcaagctttaagcccagaagggtcaattactatgtttattaa--------aaaaaaAA-----------------------AAAAAAAAAAACCTGTTAgaccaggcatggtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaatgagccgggcatggtggcgcatgcctgtagtcccagatacttgggaggctgaggcaggagaatcacttgaacccggaaagcagaggttgcagtaagctgagctcgcaccagtacactccagcctaggcgacagag----actccatctca--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2818148 365 - 2847728 caaatacaagtttcaagctttaagcccagaagggtcaattactatgtttattaaaaacaaacaaacaaac-----------------------aaaacaaaaaaactgttaggccaggcatggtggctcacgcctgtaatcccagcactttgggaggctgagatgggcagatcacgaggtcaagagatcaagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcacacgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccagaaagcaaaggttgcagtgagctgagctcgcaccagtgcactccagcctgggcgacagag----actccatctca--- i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13142450 351 - 14256875 caaatataagtttcaagctttaaaatcggaagggtcaatttatatgtttatta-----------------------------------------aaaaaaaAAAACTGTT-ggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcagatcatgaggccaagagatcaagaccatcctggccaacacggtgaaatcccatctctactaaaaatacaaaaattagccaggtgtgatggtgtgcgcctgtaatcccagcttcttgggaggctgaggcaggagaatctcttgaacccaggagatggatgttgtggtgagctgagattgtgccacggcactccagcctgggtgacagagtgaga--ctgtctcaaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1033912 347 - 2196201 caaatataagtttcaagctttaaaaccagaagggttgatt--tatgtttatt---------------------------------------------aaaaaaaactgtt-ggctgggcgtggtggctcacacctgtaatcccagcactttgggaggccgaggtgggcatattacgaggccaagagattgagatcatcctggccaacacagtgaaatcccatctctactaaaaatacaaaaattaggtgggtgaggtggtgcatgcctgtaatcccagctacttgggaggctgatgcaggagaatctcttgaacccaggagatggaggttgtagtgagccaagattgtgccactgcactccagcctgggtgacagagtgagactctgtctcaaaa i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=35518.000000 s hg38.chr4_KI270789v1_alt 149463 52 + 205944 ccaaaaaccaaaaaccaaaaaaa-caaaaaaacaaacaaacaccagaataaaa s panTro5.chr4 192936543 41 + 194502333 acaaaaaccaaaaaccaaaaaaa------------acaaacaccagaataaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820196 53 + 195804263 acaaaaaccaaaaaccaaaaaaaacaaaaaaaaaaacaaacaccagaataaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857444 50 + 4876863 gcaaaaaacaaaaaccaaaaaaaacaaaaaaa---acgaacaccagaataaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748148 46 + 115148730 acaaaaaacaa-----aaaaaaaacaaaaaaaa--ccaaacaccataataaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034675 28 + 190429646 --------------------aaaataaaacaac-----agcaacaaaaaaaaa i rheMac8.chr5 C 0 I 4 s macFas5.chr5 187977549 28 + 189454096 --------------------aaaataaaacaac-----agcaacaaaaaaaaa i macFas5.chr5 C 0 I 5 s cerAty1.NW_012001672v1 3398464 28 + 4669795 --------------------aaaataaaacaac-----agcaacaaaaaaaCC i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134355979 31 + 135778131 -----------------aaaaaaataaaacaac-----agcaacaaaaaaaCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2818513 31 - 2847728 -----------------aaaaaaataaaacaac-----agcaacaaaaaaaca i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13142801 50 - 14256875 --aaaagaaaaacaaacaaacaaacaaaAAAAACAAAGATAAACAAACAAAA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034259 40 - 2196201 --ataaaacaa----------aaacaaaaacaaaaaagataaacaaataaaa- i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e macNem1.NW_012013133v1 24368876 31 - 25927173 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1108265.000000 s hg38.chr4_KI270789v1_alt 149515 181 + 205944 ctgtctatgggacaattgggtcagctttagtttttccaatccttgagcatgggatatttttccatttatttgtgtcgtctcatctcttatttctttcagcagtgttttgtgctt---ctcgtagagatcgttcatctccttggttagctgtatgcctataggtattttattttctttgtggctt s panTro5.chr4 192936584 181 + 194502333 ctgtctatgggacaattgggtcagctttagtttttccaatccttgagcatgggatatttttccatttatttgtgtcgtctcatctcttatttctttcagcagtgttttgtgctt---ctagtagagatcgttcatctccttggttagctgtatgcctataggtattttattttctttgtggcta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820249 181 + 195804263 ctgtctatgggacaattgggtcagctttagtttttccaatccttgagcatgggatatttttccatttatttgtgtcgtctcatctcttatttctttcagcagtgttttgtgctt---ctagtagagatcgttcatctccttggttagctgtatgcctataggtattttattttctttgtggcta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857494 181 + 4876863 ctgtctgtgggacaattgggtcagctttagtttttccaatccttgagcatgggatatttttccacttatttgtgtcttctcatctcttatttctttcagcagtgttttgtgctt---ctcgtagagatcgttcatctccttggttagctgtatgcctataggtatttcattttctttgtggcta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748194 177 + 115148730 ctgtctatggaacagttggttcagttttagttttcccagtccttgagcatgggatatttttccattcatttgtgtcatctcacctctta----tttcagcagtgttttgtgctt---ctcgtagagatcgttcatctccttggttagttgtatgcctataggtattttattttctttgtggcta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034707 180 + 190429646 -TGTCTGTAGGACAATTGGGTCAGTGttagtttttccagtccttgagtatgggatatttttccatttatttgtgtcgtctcatcccttctttctttcagcagtgttttgtattt---cttgtagagatcgttcatctccttggttggttgtatgcctataggtattttattttctttgtggcta i rheMac8.chr5 I 4 C 0 s macFas5.chr5 187977582 181 + 189454096 ctgtctgtaggacaattgggtcagtgttagtttttccagtccttgagtatgggatatttttccatttatttgtgtcgtctcatcccttctttctttcagcagtgttttgtattt---cttgtagagatcgttcatctccttggttagttgtatgcctataggtattttattttctttgtggcta i macFas5.chr5 I 5 C 0 s macNem1.NW_012013133v1 24368907 181 - 25927173 CTGTCTGTAGGACAATTGGGTCAGTGttagtttttccagtccttgagtatgggatatttttccatttatttgtgtcgtctcatcccttctttctttcagcagtgttttgtattt---cttgtagagatcgttcatctccttggttagttgtatgcctataggtattttattttctttgtggcta i macNem1.NW_012013133v1 I 31 C 0 s cerAty1.NW_012001672v1 3398493 180 + 4669795 CTGTCTGTAGGACAATTGGGTCAGTGttagtttttccagtccttgagcatgggatattttt-catttatttgtgtcgtctcctcccttctttctttcagcagtgttttgtattt---cttgtagagatcgttcatctccttggttagttgtatgcctataggtattttattttctttgtggcta i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134356010 181 + 135778131 CTGCCTGTAGGACAATTGGGTTAGTGttagtttttccagtccttgagcatgggatatttttccatttatttgtgtcgtctcctcccttctttctttcagcagtgttttgtattt---ctcgtagagatcgttcatctccttggttagttgtatgtctataggtattttattttctttgtggcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2818544 180 - 2847728 ctgtctgtaggacaattgggtcagtgttagtgtttccagtccttgagtatgggatg-ttttccatttatttgtgtcgtctcctcccttctttctttcagcagtgtcttgtattt---cttgtagagatcgttcatctccttggttagttgtatgcctataggtattttattttctttgtggcta i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13142851 179 - 14256875 CTGTGTATGggacaattgggccagtttaaatttttacagtccttgagcatgggatatgttttcattgatttgtgttgtctcatctcttatttcttt---cagtgctttgtacttctgcttgtagagatctttcatctccttggtgaatttcgtgcc--tgggcatttcattttctttgtggctg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034299 182 - 2196201 ctgtctatgggacaattgggccagtttaaatttttccaatccttgagcatgggatactttttcatttatttgtgtcgtctcatctcttatttctttcagcagtgttttgtacctctccttgtagagatctttcatctccttggttagtttcatgcc--tggatatttcattttctttgtggctg i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3420889 1061 - 5030052 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=616063.000000 s hg38.chr4_KI270789v1_alt 149696 91 + 205944 ttgtaagtgggactgtgttcttgatttcaccctcagcctggatgctgttggtgAAATATGTATTTTTaaaaaagaaaagcaaaaa------aaaaaa s panTro5.chr4 192936765 91 + 194502333 ttgtaagtgggactgtgttcttgatttcactctcagcctggatgctgttggtgAAATATGTATTTTTaaaaaagaaaagcaaaaa------aaaaaa i panTro5.chr4 C 0 I 3 s panPan2.chr4 192820430 91 + 195804263 ttgtaagtgggactgtgttcttgatttcactctcagcctggatgctgttggtgAAATATGTATTTTTaaaaaagaaaagcaaaaa------aaaaaa i panPan2.chr4 C 0 I 2 s gorGor5.CYUI01015356v1 3857675 90 + 4876863 ttgtaagtgggactgtgttcttgatttcactctcagcctggatgctgttggtgAAATATGTATTTTTAAAAAAGAAAAGCAAAAA------AAAAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748371 90 + 115148730 ttgtaagtgggactgtgttcttgatttcactctcagcctgcatgctgttggtgAAATATGTATTTTTAAAAAAGAAAAGCAAAAC------AAAAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034887 88 + 190429646 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTaaaacagaaaagcaaaaa------aaaaaa i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187977763 88 + 189454096 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTaaaacagaaaagcaaaaa------aaaaaa i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24369088 88 - 25927173 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTaaaacagaaaagcaaaaa------aaaaaa i macNem1.NW_012013133v1 C 0 I 1 s cerAty1.NW_012001672v1 3398673 94 + 4669795 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTAaaacagaaaagcaaaaaataaataaataa i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134356191 88 + 135778131 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTaaaacagaaaagcaaaaa------aaaaaa i chlSab2.chr7 C 0 I 60 s manLeu1.NW_012102221v1 2818724 88 - 2847728 ttgtaactggggttatgctcttgatttcactctcagcctgga---tgttGGTGAAATACGTATTTTTAAAACAGAACAGCAAAAG------AAAAAA i manLeu1.NW_012102221v1 C 0 I 2 s saiBol1.JH378165 13143030 91 - 14256875 ctgtaagcgggattgtgctcttgatttcacactcagcctggatgttgttggtgAAATAGATATTTTTAAAACAGaaaaacaaaaa------caaaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034481 91 - 2196201 ttgtaagcagaattgtgttcttgatttcactctcagcctggatgttgctggtgAAATATGTATTTTaaaaaaaaaaaaaaaaaaa------aaaaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3421950 91 - 5030052 ttgtaagcaggattgtgttcttgatttcactctcagcctggatgttgttggtgAAATATGTATTTTTAAaacagaaaagcaaaaa------aaagaa i aotNan1.NW_018492112v1 I 1061 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=-2442.000000 s hg38.chr4_KI270789v1_alt 149787 5 + 205944 T----AGAT s panTro5.chr4 192936859 5 + 194502333 T----AGAT i panTro5.chr4 I 3 C 0 s panPan2.chr4 192820523 5 + 195804263 T----AGAT i panPan2.chr4 I 2 C 0 s gorGor5.CYUI01015356v1 3857765 5 + 4876863 T----AGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748461 1 + 115148730 --------T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034976 5 + 190429646 a----aaaT i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187977852 5 + 189454096 a----aaaT i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24369177 5 - 25927173 a----aaaT i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3398768 5 + 4669795 t----aaat i cerAty1.NW_012001672v1 I 1 C 0 s manLeu1.NW_012102221v1 2818814 5 - 2847728 T----CAAT i manLeu1.NW_012102221v1 I 2 C 0 s saiBol1.JH378165 13143121 8 - 14256875 caaa-aGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034572 9 - 2196201 aaaagaaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422041 5 - 5030052 a----agaT i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e chlSab2.chr7 134356279 60 + 135778131 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1012156.000000 s hg38.chr4_KI270789v1_alt 149792 138 + 205944 AGACTTGACTAAACAAACATTATTATAAACAAGAAT--GAGTGTCAATATTCTTTTCCATAAGGTACTCTTACAAATCAGTGTAAAGAATTATAATTTCTCTATTTAAAAAAGGAGATAGCATTGCCAATTCACAAATTG s panTro5.chr4 192936864 138 + 194502333 AGACTTGACTAAACAAACATTATTATAAACAAGAAT--GAGTGTCATTATTCTTTTCCATAAGGTACTCTTACAAATCAGTGTAAAGAATTATAATTTCTCTATTTAAAAAAGGAGATAGCATTGCCAATTCACAAATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820528 138 + 195804263 AGACTTGACTAAACAAACATTATTATAAACAAGAAT--GAGTGTCATTATTCTTTTCCATAAGGTACTCTTACAAATCAGTGTAAAGAATTATAATTTCTCTATTTAAAAAAGGAGATAGCATTGCCAATTCACAAATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857770 138 + 4876863 AGACTTGACTAAACAAACATTATTATAAACAAGAAT--GAGTGTCAATATTCTTTTCCATAAGGTACTCTTACAAATCAGTATAAAGAATTATAATTTCTCTATTTAAAAAAGGAGATAGGATTGCCAATTCACAAATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748462 138 + 115148730 AGACTTGACTAAACAAACATTGTTATAAACAAGACT--GAGTGTCAATATTCTTTTCCATAAGGTGCTCTTACAAATCAGTATAAAGAATTATAATTTCTCTGTTTAAAAAAGGAGATAGCATTGCCAATTCACAAATTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189034981 140 + 190429646 AGACTTGACTAAACAAACATTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagataacattgccaattcacaaattg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187977857 140 + 189454096 AGACTTGACTAAACAAACATTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagatagcattgccaattcacaaattg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369182 140 - 25927173 AGACTTGACTAAACAAACATTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagatagcattgccaattcacaaattg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3398773 140 + 4669795 agacttgactaaacaaacaTTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagatagcattgccaattcacaaattg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356339 136 + 135778131 aGACTTGACT----AAACATTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagatagcattgccaattcacaaattg i chlSab2.chr7 I 60 C 0 s manLeu1.NW_012102221v1 2818819 140 - 2847728 AGACTTGACTAAACAAACATTATTATAAACAAGACTGAGAGTGTCAATATTCTTTTCCataaggagctcttacaaaccagtataaagaactataatttctccatttaaaaaaggagatagcattgccaattcacaaattg i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13143129 138 - 14256875 AGACTTAACTAAACAAACATTATTGTAAACAAAACTGAGAGTGTCAA-ATTCTTTTCCATAAGGAGCTCTTACAAATCACTATAAAGAATTATAATTCCTCTACTTAAAAAATGAGATAG-ATTGCCAACTCATAAATTG i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 1034581 139 - 2196201 aGACTTGATTAAATAAACA-TATTATAAACAAAACTGAAAGTGTCAATATTCTTTTCCTTAAGGAACTCTTGCAAATCACTATAAAGAATTATAATTCCTCTATATAAAAAATGAGATAGCACTGCCAACTCATAAATTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422046 140 - 5030052 AGACTTGACTAAACAAACATTATTATAAACAAAACTGAGAGTGTCAATATTCTTTTCCATAAGGAGTGCTTACAAATCACTATGAAGAATTATAATTTCTCCATTTAAAAAATGAGATAGCGTTGCCAACTCAGAAATTG i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=21294.000000 s hg38.chr4_KI270789v1_alt 149930 3 + 205944 TAT s panTro5.chr4 192937002 3 + 194502333 TAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820666 3 + 195804263 TAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857908 3 + 4876863 TAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748600 3 + 115148730 TAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035121 3 + 190429646 tat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187977997 3 + 189454096 tat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369322 3 - 25927173 tat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3398913 3 + 4669795 tat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356475 3 + 135778131 tat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2818959 3 - 2847728 tat i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1034720 3 - 2196201 TAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422186 3 - 5030052 TAT i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e saiBol1.JH378165 13143267 3 - 14256875 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=361173.000000 s hg38.chr4_KI270789v1_alt 149933 61 + 205944 ATAAGTGGCCTATGAATGCAAAAACCTCAATTGCATAAGTAAT--AAAAAAGTCTAAATAAAG s panTro5.chr4 192937005 61 + 194502333 ATAAGTGGCCTATGAATGCAAAAACCTCAATTGCATAGGTAAT--AAAAAAGTCTAAATAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820669 61 + 195804263 ATAAGTGGCCTATGAATGCAAAAACCTCAATTGCATAGGTAAT--AAAAAAGTCTAAATAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857911 61 + 4876863 ATAAGTGGCCTATGAATGCAAAAACCTCAATTGCATAAGTAAT--AAAAAAGTCTAAATAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748603 61 + 115148730 ATAAGTGGCCTATAAATGCAAAAACCTTAATTGCATAAGTAAT--AAAAAAGTCTAAATAAAG i nomLeu3.chr7b C 0 T 90 s rheMac8.chr5 189035124 54 + 190429646 ataagtggcctataaatgcaaaaatgttaattgcataagtaat--aaaaaagtcta------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978000 54 + 189454096 ataagtggcctataaatgcaaaaacgttaattgcataagtaat--aaaaaagtcta------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369325 54 - 25927173 ataagtggcctataaatgcaaaaatgttaattgcataagtaat--aaaaaagtcta------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3398916 54 + 4669795 ataagtggcctataaatgcaaaaatgttaattgcataagtaat--aaaaaagtcta------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356478 54 + 135778131 ataagtgacctataaatgcaaaaacgttaattgcataagtaat--aaaaaagtcta------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2818962 54 - 2847728 ataagtggcctataaatgcaaaaatgttaattgcataagtaat--aaaaaagtcta------- i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13143270 63 - 14256875 ATAAGTGGTCTATAAATGTAAAAACCTTAATTGCACAAGTAATTTAAAAAAGTCTAAATAAAG i saiBol1.JH378165 I 3 C 0 s cebCap1.NW_016107886v1 1034723 43 - 2196201 ATAAGTGGTCTATAAATGTAAAAACCTTAATTGCAAAAGTAAT-------------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422189 52 - 5030052 ATAAGTGGTCTATAAATGCAAAAACCTTAATTATACAAGTAAT--AAAAAAGTC--------- i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=4360.000000 s hg38.chr4_KI270789v1_alt 149994 7 + 205944 TGATA-----------TT s panTro5.chr4 192937066 7 + 194502333 TGATA-----------TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820730 7 + 195804263 TGATA-----------TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857972 7 + 4876863 TGATA-----------TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748574 18 + 115148730 AGATAGCATTGCCAATTC i nomLeu3.chr7b T 90 C 0 s saiBol1.JH378165 13143333 7 - 14256875 TGATA-----------TT i saiBol1.JH378165 C 0 T 73 e calJac3.chr3 189652123 911 - 190850796 I e cebCap1.NW_016107886v1 1034766 0 - 2196201 C e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3422241 0 - 5030052 C e colAng1.NW_012116221v1 918289 1310 + 2368649 M e manLeu1.NW_012102221v1 2819016 0 - 2847728 C e chlSab2.chr7 134356532 0 + 135778131 C e cerAty1.NW_012001672v1 3398970 0 + 4669795 C e macNem1.NW_012013133v1 24369379 0 - 25927173 C e macFas5.chr5 187978054 0 + 189454096 C e rheMac8.chr5 189035178 0 + 190429646 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=6604.000000 s hg38.chr4_KI270789v1_alt 150001 8 + 205944 TCAAATTG s panTro5.chr4 192937073 8 + 194502333 ACAAATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820737 8 + 195804263 ACAAATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857979 8 + 4876863 ACAAATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748592 8 + 115148730 ACAAATTG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e cebCap1.NW_016107886v1 1034766 0 - 2196201 C e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3422241 0 - 5030052 C e saiBol1.JH378165 13143340 73 - 14256875 T e colAng1.NW_012116221v1 918289 1310 + 2368649 M e manLeu1.NW_012102221v1 2819016 0 - 2847728 C e chlSab2.chr7 134356532 0 + 135778131 C e cerAty1.NW_012001672v1 3398970 0 + 4669795 C e macNem1.NW_012013133v1 24369379 0 - 25927173 C e macFas5.chr5 187978054 0 + 189454096 C e rheMac8.chr5 189035178 0 + 190429646 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=11139.000000 s hg38.chr4_KI270789v1_alt 150009 48 + 205944 TATAAAAGTGGCCTATAAATGCAAAAACCTTAATTGCATAAGT-----AATAA s panTro5.chr4 192937081 48 + 194502333 TATAAAAGTGGCCTATAAATGCAAAAACCTTAATTGCATAAGT-----AATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820745 48 + 195804263 TATAAAAGTGGCCTATAAATGCAAAAACCTTAATTGCATAAGT-----AATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3857987 48 + 4876863 TATATAAGTGGCCTATAAATGCAAACACCTTAATTGCATAAGT-----AATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748600 48 + 115148730 TATATAAGTGGCCTATAAATGCAAAAACCTTAATTGCATAAGT-----AATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035178 5 + 190429646 ------------------------------------------------aataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978054 5 + 189454096 ------------------------------------------------aataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369379 5 - 25927173 ------------------------------------------------aataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3398970 5 + 4669795 ------------------------------------------------aataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356532 5 + 135778131 ------------------------------------------------aataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819016 5 - 2847728 ------------------------------------------------aatta i manLeu1.NW_012102221v1 C 0 C 0 s saiBol1.JH378165 13143267 50 - 14256875 TATATAAGTGGTCTATAAATGTAAAAACCTTAATTGCACAAGTAATTTAA--- i saiBol1.JH378165 T 73 C 0 s cebCap1.NW_016107886v1 1034766 6 - 2196201 -----------------------------TTAA---------------AA--- i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e aotNan1.NW_018492112v1 3422241 0 - 5030052 C e colAng1.NW_012116221v1 918289 1310 + 2368649 M e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1479516.000000 s hg38.chr4_KI270789v1_alt 150057 171 + 205944 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAAATAAAGTGAACAGAAGAAAAtggggaaaaagggagccttttagactgctagtgggagggtaactttgtataaactattagaatacaatttgtcaatccgtgttacaatca s panTro5.chr4 192937129 171 + 194502333 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAAATAAAGTGAACAGAAGAAAAtggggaaaaagggagccttttagactgctagtgggagggtaactttgtataaactattagaatacaatttgtcaatctgtgttacaatca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820793 171 + 195804263 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAAATAAAGTGAACAGAAGAAAAtggggaaaaagggagccttttagactgctagtgggagggtaactttgtataaactattagaatacaatttgtcaatctgtgttacaatca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3858035 171 + 4876863 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAAATAAAGTGAACAGAAGAAAAtggggaaaaagggagcctcttagactgctagtgggagggtaactttgtataaactattagaatacaatttgtcaatctgtgttacaatca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748648 171 + 115148730 AAAAGTCTAAATAAAGTGATACTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAAATAAAGTGAACAGAAGAAAAtggggaaaaagggagcctcttagactgctagtgggagggtaactttgtataaactattagaatacaatttgtcaatctgtgttacaatca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035183 171 + 190429646 aaaagtctaaataaagtgatattattttctactgatacaattgatggggag-aaaatccaaactgaagtgaacagaagaaaatggggaacaagggagcctcttagactgctagtgggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978059 171 + 189454096 aaaagtctaaataaagtgatattattttctactgatacaattgatggggag-aaaatccaaactgaagtgaacagaagaaaatggggaacaagggagcctcttagactgctagtgggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369384 171 - 25927173 aaaagtctaaacaaagtgatattattttctactgatacaattgatggggag-aaaatccaaactgaagtgaacagaagaaaatggggaacaagggagcctcttagactgctagtgggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3398975 171 + 4669795 aaaagtctaaataaagtgatattattttctactgatacaattgatggggag-aaaatccaaactgaagtgaacagaagaaaatggggaacaagggagcctcttagactgctagtgggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356537 171 + 135778131 aaaagtctaaataaagtgatattattttctactgatacaattgatggggag-aaaaaccaaactgaagtgaacagaagaaaatagggaacaagggagcctcttagactgctagtgggagggtaactttgtatcaactcttagaatacaatttgtcaatctgtgttacaatca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819021 171 - 2847728 aaaagtctaaataaagtgatattattttctactgatacaattgatggggag-aaaatccaaactgaagtgaacagaagaaaatggggaacaagggagcctcttagactgctagtgggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 919604 171 + 2368649 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTGATGGGGAG-AAAAACCAAACTGAAGTGAACAGAAGAAAAtggggaacaagggagcctcttagactgctagagggagggtaactttgtataaactcttagaatacaatttgtcaatctgtgttacaatca i colAng1.NW_012116221v1 M 1310 C 0 s saiBol1.JH378165 13143317 169 - 14256875 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTTG-GGGGAGAAAAAAACGAAATGAGGTGAACAGAGGAAAACggggaa--agggagcctcatagactgctggtgggagggtaacttcgtgtagatgattagaacaccatttgtcagtctgtgttaaaatca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034772 170 - 2196201 AAAAGTCTAAATAAAGTGATATTATTTTCTACTGATACAATTTG-GGGGAG-AAAAAACAAAATAAGGTGAACAGAGGAAAAtggggaaagagggagcctcgtagactgctggtgggagggtagctctgtataaatgattagaacaccatttgtcaatctgtgttaaaatca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422241 163 - 5030052 -------TAAATAAAGTGATATTATTTTCTACTGATACAATTTG-GGGGAG-AGAAAACAAAATAAGGTGAACAGAGGAAAAtggggaaagagggagcgtcttagactgctggtgggagggtagctttgtataaatgattagaacaccatttgtcaatctgtgttaaaatca i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e canFam3.chr16 16984015 2093 - 59632846 I e mm10.chr8 86635745 2667 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=397695.000000 s hg38.chr4_KI270789v1_alt 150228 43 + 205944 aattgttcattcactttgtaacaacagttctatttctaggaaa s panTro5.chr4 192937300 43 + 194502333 aattgttcattcactttgtaacaacagttctatttctaggaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192820964 43 + 195804263 aattgttcattcactttgtaacaacagttctatttctaggaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3858206 43 + 4876863 aattgttcattcactttgtaacaacagttctatttctaggaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748819 43 + 115148730 aattgttcattcactttgtaacaacagttccatttctacgaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035354 43 + 190429646 aattgttcattcactttgtaacaacagttccatttctaggaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978230 43 + 189454096 aattgttcattcactttgtaacaacagttccatttctaggaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369555 43 - 25927173 aattgttcattcactttgtaacaacagttccatttctaggaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399146 43 + 4669795 aattgttcattcactttgtaacaacagttccatttctaggaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356708 43 + 135778131 aattgttcattcactttgtaacaacagttccatttctaggaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819192 43 - 2847728 aattgttcattcactttgtaacaacagttccatttctaggaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 919775 43 + 2368649 aattgtccattcactttgtaacaacagttccatttctaggaaA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13143486 40 - 14256875 aattgtccattcactttgtaacga---tttcatttctaggaag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034942 40 - 2196201 aattgttcattcactttgtaacga---ttccatttctaggaag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422404 40 - 5030052 aattgttcattcactttgtaacag---ttccatttctaggaag i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16986108 43 - 59632846 AAGTGTTTATTCAGTTTTTGACCATATGTCTACTTCTTGGAAA i canFam3.chr16 I 2093 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e mm10.chr8 86635745 2667 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1755032.000000 s hg38.chr4_KI270789v1_alt 150271 190 + 205944 taattatagat-ggcaactatttctatataaagcttttcattacaatgttaaatatgataaaattggggata--c--tcaagtggtcactaataggagcatgactaaataaactttggtagtgacagtaaatagaataccatgcatctattagaaa------tgccttttagaaaa-taaagtcaatggcatgggGATACAG s panTro5.chr4 192937343 190 + 194502333 taattatagat-ggcaactatttctatataaagcttttcattacaatgttaaatatgataaaattggggata--c--tcaagtggtcactaataggagcatgactaaataaactttggtagtgacagtaaatagaataccttgcatctattagaaa------tgccttttagaaaa-taaagtcaatggcatgggGATACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821007 190 + 195804263 taattatagat-ggcaactatttctatataaagcttttcattacaatgttaaatatgataaaattggggata--c--tcaagtggtcactaataggagcatgactaaataaactttggtagtgacagtaaatagaataccttgcatctattagaaa------tgccttttagaaaa-taaagtcaatggcatgggGATACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3858249 190 + 4876863 taattatagat-ggcaagtatttctatataaagcttttcagtacaatgttaaatatgataaaattggggata--c--tcaagtggtcactaataggagcatgactaaataaactttggtagtgacagtaaatagaataccatgcatctattagaaa------tgccttttagaaaa-taaagtcaatggcatgggGATACGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112748862 193 + 115148730 taattatagatgggcaactatttctatataaagcttttcattacaatgttaaatatgataaaattggggata--cttttaagtggtcactaatgggagcataactaaataaactttggtagtaacagtaaatagaataccatgcgtctattagaaa------tgccttttagaaaa-taaagtcaatggcatgggGATACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035397 193 + 190429646 tagttatagatgggcaactatttctataaaaagcttttcattacaatgttgaatatgatacaattggggatagtc--ctaagtgctcactaacaggagcatgactaaataacctttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgCGGATATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978273 193 + 189454096 tagttatagatgggcaactatttctataaaaagcttttcattacaatgttgaatatgatacaattggggatagtc--ctaagtgctcactaacaggagcatgactaaataacctttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgCGGATATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369598 193 - 25927173 tagttatagatgggcaactatttctataaaaagcttttcattacaatgttgaatatgatacaattggggatagtc--ctaagtgctcactaacaggagcatgactaaataacctttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgCGGATATAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399189 193 + 4669795 tagttatagatgggcaactatttctatataaagcttttcattacaatgttgaatatgatacaattggggatagtc--ctaagtgctcactaacaggagcatgactaaataacctttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgCGGATATAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356751 193 + 135778131 tagttatagatgggcaactatttctatataaagcttttcattacaatgttgaatatgatacaattggggatagtc--ccaagtgctcactaacaggagcatgactaaataaactttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgTGGATATAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819235 193 - 2847728 tagttatagatgggcaactatttctatataaagcttttcattacaatgttgaatatgatacaattggggatagtc--ctaagttcttactaacaggagcatgactaaataacctttggtactgacagtaaatagaataccaggcatctattagaaa------tgcctttcagaaaa-taaagtcaatggcatgCAGATATAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 919818 193 + 2368649 TAGTTATAGATGGGCAACTATTTCTATATAAAGCTTTTCATTACAATGTTGAATATGATACAGTTGGGGATAGCC--CTAAGTGCTCACTAACAGGAGCATGACTAAATAAACTTTGGTACTGACAGTAAATAGAATACCAGGCATCTATTAGAAA------TGCCTTTCAGAAAA-TAAAGTCAATGGCATGCGGATACAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13143526 192 - 14256875 tgattatagatgggcaactatttctgtataaagcttttcattacaatgttaaatatgat-aaattgggaatactc--ttaagtgttcacttacaggagaatgactaaatgaactatggGAGTGATGATAAATAGAATACCATGCGTCTACTAGAAA------TGTCTTTTAGAAAA-TAAGGTAGACGCCATGGGGATACAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1034982 192 - 2196201 taactatagatgggcaactatttctgcataaagcttttcattacaatgttaaatatgat-aaattgggaatactc--ttaagtgttcacttatagaagcatgactaaatgaactttgggagtgacggtaaatagaataccatgcatctattagaaa------TGCCTTTTAGAAAA-TAAGGTAAATGGCATGGGGATACAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422444 192 - 5030052 taattatagatgggcaactatttctgtacaaaacttttcattacaatgttaaatacgataaaattgggaatactc--ttaagtgttcaattacaggagcatgactaaatgaactttgggagtcacagtaaacagaataccatgcatctgttagaaa------tGTCTTCTAGAAAA-TAAGGTAAACA-CATGGGGATACAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86638412 195 - 129401213 TAAGCATAATT-GGTAACTACTTCTGTGTAAAGATGACACTTAAAATATTTTCTATTGCAAAGTTACAAAATATG--TCAACTATTCACTAACAGGATCATGGTCAAATAGGTATTGGTATTGACAGTAAATGAGCTGACCTAGGTCTATTAGAAACTAAACTATCTGTTGGGAAATTTCAGCAAATGACATGGAGGC---- i mm10.chr8 I 2667 C 0 s canFam3.chr16 16986151 191 - 59632846 CAATTATAGATGGACAACTATTTCTATATAAAATTGCTCATTATAATGTTATATATCATAAAATTGCCAATAATC--TTAA--TGTCACTATCAGGGACACGACCAAATAAATTTTGATAGTGACATTAAATAGAATCCCATCCATCTATTAGAAA------CCGTCTTTCAAAAA-CACAGCAAATGGTTTGGGGTTATAT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1478897 6611 - 2520184 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=4530040.000000 s hg38.chr4_KI270789v1_alt 150461 528 + 205944 ACATAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctacgacgggcctttgtccccagaattaagcctggagaattgtcctcgaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcggatgctggactctgagagaaggctgagcacagccttgggtaatgcagaacttcctcaa-aaggc-aaggaggcaaaaataaa-----------------acaagtgaagagcaactctcttagaagaggaaatgca----ctcaagcccttgggccacagagaaaagtgctcct---gaaactggaaactctatggactcccagcctccagcctgcctgctcttcag----tcagtcaccctacaggtgacaccccctgcattccccactctcattttcagagagctgctgccgggaccctcattctgggaatggactatgaggaaggaga---cctac------------atagttgtca--------------------aggaaacc---tatgc---------------------------------------------------------cagttacatatgccatacattttaat s panTro5.chr4 192937533 528 + 194502333 ACATAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctacgacgggcctttgtccccagaattaagcctggagaattgtcctcgaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcagatgttggactctgagagaaggctgagcacagccttgggtaatgcagaacttcctcaa-aaggc-aaggaggcaaaaataaa-----------------acatgtgaagagcaactctcttagaagaggaaatgca----ctcaagcccttgggccacagagaaaagtgctcct---gaaactggaaactctatggactcccagcctccaacctgcctgctcttcag----tcagtcaccctacaggtgacaccccctgcattccccactctcattttcagagagctgctgccgggaccctcattctgggaatggactatgaggaaggaga---cctac------------atagttgtca--------------------aggaaacc---tatgc---------------------------------------------------------cagttacatatgccatacattgtaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821197 528 + 195804263 ACATAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctacgacgggcctttgtccccagaattaagcctggagaattgtcctcgaagtaaagcaggtgctctacatgtagaaa-gctcctggtgcagatgttggactctgagagaaggctgagcacagccttgggtaatgcagaacttcctcaa-aaggc-aaggaggcaaaaataaa-----------------acatgtgaagagcaactctcttagaagaggaaatgca----ctcaagcccttgggccacagagaaaagtgctcct---gaaactggaaactctatggactcccagcctccaacctgcctgctcttcag----tcagtcaccctacaggtgacaccccctgcattccccactctcattttcagagagctgctgccgggaccctcattctgggaatggactatgaggaaggaga---cctac------------atagttgtca--------------------aggaaacc---tatgc---------------------------------------------------------cagttacatatgccatacattgtaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3858439 528 + 4876863 ACATAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTGCAGGACAAAGACTGGTACTGATTCAAAATGGTGC-CTGGCTACGATGggcctttgtccccagaattaagcctggagaattgtcctcgaagtaaagcaggtgctctacgtgtagaaa-gctcgtggtgcggatgttggactctgagagaaggctgagcacagccttgggtaatgcagaacttcctcaa-aaggc-aaggaggcaaaaataaa-----------------acatgtgaagagcaactctctttgaagaggaaatgca----ctcaagcccttgggccacagagaaaagtgctcct---gaaactggaaaccctatggactcccagcctccagcctgcctgctcttcag----tcagtcaccctacaggcgacaccccctgcactccccactctcattttcagagagctgctgccgggaccctcattctgggaatggactatgaggaaggaga---cctac------------atagttgtca--------------------aggaaacc---tatgc---------------------------------------------------------cagttacatatgccatacattttaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749055 526 + 115148730 ACATAATCTGT-AAAGTAGTATAACTCCAATTTGTAGAAAGGAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-CTGGCTACCGTGggcctttgtccccagaattaagcctggagaagtgtcctggaagtaaagcaggtgctctacgtgtcgaaa-gctcctggtgc-gacgttggactctaaaagaaggctgagcacagccttgggtaatgcagaacttcctcaa-aaggc-aaggaggcaaaaatata-----------------acatgcgaagagcagctctctttgaagaagaaatgca----ctcaagcccttgggccacagagaaaaatgctcct---gaaactggaaaa-ctgtggactcccagcctccagccggcctgctcttcag----tcagtcaccctacaggccacacccgctgcgctctccactctcattctcagagagctacttctggaaccctcattctaggaatggactatgaggaaggaga---cctac------------acagttgtca--------------------aggaaacc---tatgc---------------------------------------------------------cagttacatatgccatacattttaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189035590 527 + 190429646 ATGTAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACGAATTCAAAATGGTGC-ctggctaccactggcctgtgtccgcagaatgaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcagatgttggactctgagagaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcaactctctttgaagaggaaatgca----ctcaaggccttggcccgcagagaaaagtgctcct---gaaactggaaactctgtggactcccagcctgcaggctgcc-gctcttcag----tcagtcaccctacaggcgacagcccctgctctccccactcccattttcagagagctgctgcctgaaccctcattctgggaatggactatgaggaaggaga---cctac------------tctgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatacattttaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978466 527 + 189454096 ATGTAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccgcagaatgaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcggatgttggactctgagagaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcaactctctttgaagaggaaatgca----ctcaaggccttggcccgcagagaaaagtgctcct---gaaactggaaactctgtggactcccagcctgcaggctgcc-gctcttcag----tcagtcaccctacaggcgacagcccctgctctccccactcccattttcagagagctgctgcctgaaccctcattctgggaatggactatgaggaaggaga---cctac------------tctgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatacatttcaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24369791 527 - 25927173 ATGTAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccgcagaatgaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcagatgttggactctgagaaaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcaactctctttgaagaggaaatgca----ctcaaggccttggcccgcagagaaaagtgctcct---gaaactggaaactctgtggactcccagcctgcaggctgcc-gctcttcag----tcagtcaccctacaggcgacagcccctgctctccccactcccattttcagagagctgctgcctgaaccctcattctgggaatggactatgaggaaggaga---cctac------------tctgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatacatttcaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399382 527 + 4669795 ATGTAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccccagaatgaagcctggagaattgtcctctaagtaaagcaggtgctctatgtgtagaaa-gctcctggtgcggatgttggactctgagagaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcagctctctttgaagaggaaatgca----ttcaaggccttggcccacagataaaagtgctcct---gaaactggaaactctgtggactcccagcctgcaggctgct-gctcttcag----tcagtcaccctacaggcgacagcccctgctctccccactcccattttcagagagctgctgcctggaccctcattctgggaatggactatgaggaaggaga---cctac------------tctgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatgcatttcaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134356944 525 + 135778131 ATGTAATTTGT-AAAGCAGTGTAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccccagaattaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcggatgttggactctgagagaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcaactctctttgaagaggaaatgca----ctcaagcccttggcccgcagagaaaagtgctcct---gaaactggaaactctatggacgcccagcctgcaggctgcc-gctcttcag----tcagtcaccctacaggcgacaccccctgctctccccact--cattttcagagagctgctgcctggaccctcattctgggaatggactgtgaggaaggaga---cctac------------tctgttgtca--------------------aggaagcc---tgtgc---------------------------------------------------------cagttacatgtgccatacatttcaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819428 527 - 2847728 ATGTAATTTGT-AAAGCAGTATAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACTGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccgcagaatgaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctggtgcggatgttggactctgagagaaggctgagcacagcctcaggtaatgcagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acacgtgaagagcagctctctttgaagaggaaatgca----ctcaaggccttggcccacagataaaagtgctcct---gaaactggaaactctgtggactcccagcctgcaggctgct-gctcttcag----tcagtcaccctacaggcgacagcccctgctctccccactcccattttcagagagctgctgcctggaccctcattctgggaatggactatgaggaaggaga---cctac------------tctgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatacatttcaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920011 527 + 2368649 ACGTCATTTGT-AAAGCAGTGTAACTCAAATTTGTAGAAAGAAATTACAGGACAAAGACCGGTACTGATTCAAAATGGTGC-ctggctaccactggcctgtgtccccagaattaagcctggagaattgtcctctaagtaaagcaggtgctctacgtgtagaaa-gctcctagtgcggatgttggactctgagagaaggctgaacacagcgtcagggaatacagaacttcctcaa-aaggc-aagaaggcaaaaataaa-----------------acatgtgaagagcaactctctttgaaggggaaatgca----ctcaagcccttgggccacagagaaaagtgctcct---gaaactggaaactcggtggactcccagcctgcaggctgcc-actcttcag----tcagtcaccctacaggtgacaccccctgcactccccactctcattttcagagagctgctgcctgaaccctcattctggaaatggactatgagaaaggaga---cctac------------actgttgtca--------------------aggaaacc---tgtgc---------------------------------------------------------cagttacatgtgccatacatttcaat i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13143718 486 - 14256875 ACATAATTTGT-AAAGCAGCATAACTTAAATTTTTAGAAAGAAATTTTAGGACAAAGACTGGTGCTGATTGAAAATGGTGC-TTGGCTAGTGC----------------------GCCTGGAGAATTGTCGTCTGAGTAAAGCAGGTGCTGCgtgtg-------------------gatgtcggactctcaga-aaggctgagcgcagctgcgggtaatgcagaacttcctcaa-aagccaaagagggaaaaaataaa-----------------acctgtgcagagcaactctctttgaagaggagataca----ctcaag-ccctggccctcagagaaaagtgctcct---ggaactggaaactctatggacgcccagcctccaggctgcctgctcttcat----tcagtcacccac-aggtgatacactctatgctccacaggctcattttcagagagctgctgccaggaccctcattctgggaatggattatgaagaaggaga---cctac------------actgttttta--------------------aggaaacc---tatgt---------------------------------------------------------catttacatatgccatacattttaat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1035174 493 - 2196201 ACATAATTTGT-AAAGCCGCATAACTTAAATTTTTAGAAAGAAATTGCAGGACAGAGACTGGTGCTGATTGAAAATGGCGC-TTGGCTAGCAC---------------------GGCCTGgagaatcgtcgtctgagtgaagcaggcgctttgcgtgtagaaa-gctcct-gtgcagatgtcggacactgaga-aaggctgagcgcagcctcgggtaatgcagaacttcctcgg-aagcc--ggaggggaaaaataaa-----------------acccgtgcagagcagctctctttgaagagga-atgca------------cctggcccacagagaaaagtgctcct---ggaactggaaa--ctgtggacacccagcctccaggctgcctgctcttcat----tcagtcaccctctaggtgagacaccctatgctccacacgcgcattttcagagaactgctgccaggaccctcatcctgggaatggattatgaggaaggaga---cctac------------actgttgtca--------------------aggaaacc---catgt---------------------------------------------------------caattacataggccacacattttaac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3422636 506 - 5030052 ACATAATTTGT-AAAGCAGCATAACTTAAATTTTTAGAAAGAAATTGCAGGACAAAGACTGGTACTGTTTGGAAATGGTTc-ctggctaatgc---------------------agcctggagaatcgtcgtctgagtaaagcaggtgctctgcatgtagaaa-gctcctggtgcagatgtcggactctgaga-aaggctgagcgcagcctcgggcagtgcagaacttcctcag-aagccaaagagggaaaaaataaa-----------------acctgtgcagaacaactctctttgaagaggaaatgca----ctcaag-ccctgacccacagagaaaagtgctcct---ggaactggaaactctatggactcccagcctccaggctgcctgctcttcat----tcagtcaccctacaggtcagacaccctatgctccacatgctcatttgcagagagctgctgccaggaccctcattctgggaatggattatgaggaaggaga---tctac------------actgttgtca--------------------aggaaacc---tatgt---------------------------------------------------------cagttacatatgccatacattttaat i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86638607 588 - 129401213 -----ATCCAT-AAAAGAGTAGATTCATAACTTGTGAAAAA----TATAGGATAAAGGCTGGTTCTGACTTAAAAAGATATGTTGGTTGCAGTTTTCTCATAGCCTCAGAATAAAGGCTGCAGAATT-CCCTATAAGTAGCGCTAGTGATTTA----TAGCAGTGGTTCTTGTGTGA-----------------AAGCCAGAGCAGAAGTTTAGATGAAGTGTTCCTTTCTCAACAAGGC-AAAAAGGGAGAAGAAAAAAAAAAAAAGAAGAAATAAATGGGAAGAGCAGCCTCATTCAAAGATGAGGTACAGGTGCTGAAGTCCATAACTCAGAAAG-------------------CGGGATACTTCATGGGCTCT--ACCTTTACAGTGAC--CTTTCCATGACCTCACT-ACCCACGAGGCAGGACCTCCCATGATCCTC---CTTTTGTCTACAGTGGTGCTATCAAGAAC--TGTTCCGGGAACATCTTGTCAGGAAGGAGA---TTTGTAATTGCTTTTTAATAGTTGGTAATAAATGTAACTGGTCAGTCAGGAAACC---CCAGCTGGTGGAAGAACTTTTTTTTTTTTAAAGAATGAGAAAAAAATCCAATAtttttaattcattttttcatgcaatacattttaat i mm10.chr8 C 0 I 120 s canFam3.chr16 16986342 493 - 59632846 TCATAATTTATAAAAGCAGTATTGC---AATTTATGGGAAGAAATTACAGAAGAAATAGAGATACTAATTCAAAAtggcag-ct-----ccattgacttttgtcc-cagaattaggtatggaaaattgtcctctaagtaaagcaaattctctacata-ggaaa-gcttctagtgtgaatattggactct------------------------------gctgggtttcctgaa-aagtc-agaggaggaaaaaagga-----------------aactgtgaagagcaactttctttaaagaggaagtaca----ctaaagccgtttaaccttaaagggaaattcttttttctaaactggaaactacatggactcctaataccctgactgtctgctcttcac----tcagtcaccttataggcaagaccactatgattacccctgctca----cagagagctgctatcatagccctcattctgggaaagtcctgtgaggaagccaatcctctac------------a-aattgcca--------------------agtatgttgaatatac---------------------------------------------------------tagttgaatatgctgtagattttaat i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485508 367 - 2520184 atacagtttgT-GAAACAGAATACTGACAGGTTTGGGTGAGACATTAGAGAAGGAAGGCTG-CACGG--TCAAGATGGTGG-CCAG-----------------------------GCCTGGAGCCTTGTGTGC----TGaagcaggtgatgtgcacagagaac-gctgctggtgtgaattcggggctctgaga-gagttggagcagagcctcgggcagggctgggcctcctcca-agggcgaagacgacaa------------------------gcaggtg------------------ggggaaaccgcg--------------------------------gctGCT---A-----GGCTCCCCTGTGGTCGCC-----------------TCTCTTTAC--------------------------------------------------ACAGAGAGCTGCTGGCAAGA--CTCCTCCTGGGAAGGTCCTGTGAGCAGACAGA---CCTGA------------GCAGGTG-CG--------------------AGCAGGCC---CAGGC---------------------------------------------------------CAGCGGCAGGTGC-ACACGGCGCAGC i dasNov3.JH570353 I 6611 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=656396.000000 s hg38.chr4_KI270789v1_alt 150989 68 + 205944 cgcttagttatcaatgtga-caggtagggagaaaacaccaaatgc-ttgagga-aaaccaggggtatgaaa s panTro5.chr4 192938061 68 + 194502333 cgcttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccaggggtatgaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821725 68 + 195804263 cgcttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccaggggtatgaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3858967 68 + 4876863 cgcttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccaggggtatgaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749581 68 + 115148730 cacttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccaggggtatgaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036117 68 + 190429646 cgcttagttatcaacgtga-caggtagacagagaacacccaatgc-ttgagga-aaaccaggggtaggaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187978993 68 + 189454096 cacttagttatcaacgtga-caggtagacagagaacaccaaatgc-ttgagga-aaaccaggggtaggaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370318 69 - 25927173 cgcttagttatcaatgtga-caggtagacagagaacaccaaatgctttgagga-aaaccaggggtaggaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399909 68 + 4669795 cgtttagttatcaacgtga-caggtagacagagaacaccaaatgc-ttgagga-aaaccaggggtaggaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357469 68 + 135778131 cacttagttatcaacgtga-caggtagacagagaacaccaaatgc-tggagga-aaaccaggggtaggaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2819955 68 - 2847728 cgcttagttatcaacgtga-caggtagacagagaacaccaaatgc-ttgagga-aaaccaggggtaggaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920538 68 + 2368649 cgcttagttatcaatgtga-caggtagacagagaacaccaaatgc-ttgagga-aaaccaggggtaggaaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13144204 68 - 14256875 tgcttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccagcagtatgaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1035667 68 - 2196201 tgcttagttatcaatgtga-caggtaggcagaaaacaccaaaagc-ttgagga-aaaccagtagtgtgaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3423142 68 - 5030052 tgcttagttatcaatgtga-caggtaggcagaaaacaccaaatgc-ttgagga-aaaccagcagtatgaaa i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16986835 69 - 59632846 catgtggtagtaaatatgaccaattggccaggaaacaccaaatgc-ttgagaa-aaatcaatggtattaaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485875 66 - 2520184 CCCTGGGCTGTGGATG----CCCACCAACAGCAGACACCAGGGGC-TACAGGAGAGACCAGGTGTGAGAGA i dasNov3.JH570353 C 0 I 15 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86639195 120 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=75863.000000 s hg38.chr4_KI270789v1_alt 151057 7 + 205944 gagaagc s panTro5.chr4 192938129 7 + 194502333 gagaagc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821793 7 + 195804263 gagaagc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3859035 7 + 4876863 gagaagc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749649 7 + 115148730 gagaagc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036185 7 + 190429646 gagaagc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187979061 7 + 189454096 gagaagc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370387 7 - 25927173 gagaagc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399977 7 + 4669795 gagaagc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357537 7 + 135778131 gagaagc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2820023 7 - 2847728 gcgaagc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920606 7 + 2368649 gagaagc i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13144272 7 - 14256875 gggaagC i saiBol1.JH378165 C 0 I 609 s cebCap1.NW_016107886v1 1035735 7 - 2196201 gggaagC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3423210 7 - 5030052 gggaagC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86639315 7 - 129401213 GAAAAGA i mm10.chr8 I 120 C 0 s canFam3.chr16 16986904 7 - 59632846 gaacaga i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485956 7 - 2520184 GAAAAAC i dasNov3.JH570353 I 15 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=10424.000000 s hg38.chr4_KI270789v1_alt 151064 1 + 205944 a s panTro5.chr4 192938136 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821800 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3859042 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749656 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036192 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187979068 1 + 189454096 a i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370394 1 - 25927173 a i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399984 1 + 4669795 a i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357544 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2820030 1 - 2847728 a i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920613 1 + 2368649 a i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1035742 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 I 620 s aotNan1.NW_018492112v1 3423217 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 I 604 s mm10.chr8 86639322 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16986911 1 - 59632846 a i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485963 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e micMur3.chr14 17529113 2039 - 93316391 I e saiBol1.JH378165 13144279 609 - 14256875 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=32735.000000 s hg38.chr4_KI270789v1_alt 151065 6 + 205944 -ttaaga s panTro5.chr4 192938137 6 + 194502333 -ttaaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821801 6 + 195804263 -ttaaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3859043 6 + 4876863 -ttaaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749657 6 + 115148730 -ttaaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036193 6 + 190429646 -ttaaga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187979069 6 + 189454096 -ttaaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370395 6 - 25927173 -ttaaga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399985 6 + 4669795 -ttaaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357545 6 + 135778131 -ttaaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2820031 6 - 2847728 -ttaaga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920614 6 + 2368649 -ttaaga i colAng1.NW_012116221v1 C 0 C 0 s mm10.chr8 86639323 6 - 129401213 -ATAAGA i mm10.chr8 C 0 I 1 s canFam3.chr16 16986912 3 - 59632846 -tca--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485964 6 - 2520184 ATAAAG- i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189652123 911 - 190850796 I e cebCap1.NW_016107886v1 1035743 620 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e aotNan1.NW_018492112v1 3423218 604 - 5030052 I e saiBol1.JH378165 13144279 609 - 14256875 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=2604.000000 s hg38.chr4_KI270789v1_alt 151071 1 + 205944 -t s panTro5.chr4 192938143 1 + 194502333 -t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821807 1 + 195804263 -t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3859049 1 + 4876863 -t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749663 1 + 115148730 -t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036199 1 + 190429646 -t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187979075 1 + 189454096 -t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370401 1 - 25927173 -t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399991 1 + 4669795 -t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357551 1 + 135778131 -t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2820037 1 - 2847728 -t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920620 1 + 2368649 -t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189653034 1 - 190850796 -T i calJac3.chr3 I 911 C 0 s saiBol1.JH378165 13144888 1 - 14256875 -T i saiBol1.JH378165 I 609 C 0 s aotNan1.NW_018492112v1 3423822 1 - 5030052 -T i aotNan1.NW_018492112v1 I 604 C 0 s mm10.chr8 86639330 1 - 129401213 -C i mm10.chr8 I 1 C 0 s canFam3.chr16 16986915 1 - 59632846 -T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485970 1 - 2520184 A- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1035743 620 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=15451468.000000 s hg38.chr4_KI270789v1_alt 151072 1412 + 205944 TACTTTTT---------------------------------------------AATGGAAATG-TATATATTCACCTAGGC---TATTCTT-CCTTACC-CAAGTTGAAACTG-AATAGTATGACCTAAACGTACATTTCGTGTGCTGGGAAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCGTA-------------GGTTTCCT-GTCATTAATTTGCTCACCAGTGCAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAAGTTTTGTCCATGAGGAATTTTCAGTCTAATGCCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATGTATCTTCCAACTATCTCCACTACTGCAGGACACAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCACCTGGAA---TCTTTTATGCCAAAATA-AGAGTCTTA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCGTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGCAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTCAGAATCCTTC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAGTCACGTCTGAAACATGTGAAATATACCTAAGGACCCGAGGTCAGGGTTGAGTGTCCAAATTCAACCAGTTATTCGCACGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCC-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA-TTTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGGTGCATTAGAATCTTAGGAGTAAAATATCCCTCACAAAATTT----GA-TATCTT---ATCTGATTAGTTAATACAGACATATTACATTTTTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAACGGAGAAGCATGTAGTAACATACT----GATTTTAA--GGAACC-------TATGCTAATAATTTTAAGTAGTAAAACTTA--AAACTA-----AACTTAAGAAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTCATTTAAGCTGCTCTTCTAAGTGTTAGGGAAATATGAAAATTGA-AA-------GTGTGACCTTGTTGTCCAG-----TAAAGTAA-------TTTTATCGA---ATTTGGTAGACTCTTAATTGTCCCTAAGTATTCATTTTCCCTTTC-----TTTT-TTTTTTTTTATTGTAGCtt-ttcttttgaaatatgcgttgcctccca-gacattgc-aaaat------ggtatagtgagttctggt s panTro5.chr4 192938144 1401 + 194502333 TACTTTTT---------------------------------------------AATGGAAATG-TATATATTCACCTAGGC---TATTCTT-CCTTACC-CAAGTTGAAACTG-AATAGTATGACCTAAACGTACATTTCGTGTGCTGGGAAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCGTA-------------GGTTTCCT-GTCATTAATTTGCTCACCAGTGCAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAAGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTCCAACTATCTCCACTACTGCAGGACACAGACACCATCTATAAATCTCACATTGTAATGACTAACACTTATCTTTGTTATTGTCACCTGGAC---TCTTTTATGCCAAAATA-AGAGTCTTA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCGTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGCAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTCAGAATCCTTC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAGTCACGTCTGAAACATGTGAAATATACCTAAGGACCCGAGGTCAGGGTTGAGTGTCCAAATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCC-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA-TTTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGGTGCATTAGAATCTTAGGAGTAAAATATCCCTCACAAAATTT----GA-TATCTT---ATCTGATTAGTTAATACAGACATATTACATTTTTCAACTAATTTTTTTTCTT---AAGAA----TTCTTTCAG--------AAACGGAGAAGCATGTAGTAACATACT----GATTTTAA--GGAACC-------TATGCTAATAATTTTAAGTAGTAAAACTT-------TA-----AACTTAAGAAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTCATTTAAGCTGCTCTACTAAGTGTTAGGGAAATACGAAAATTGA-AA-------GTGTGACCTTGTTGTCCAG-----TAAAGTAA-------TTTTATCGA---ATTTGGTAGACTCTTAATTGTCCCTAAGTATTCATTTTCCCTTTC--------T-TTTTTTTTTATTGTAGCTT-TTCTTTTGAAATATGCGTTGCCTCCCA-GACATTGC-AAAAT------GGTATAGTGAGTTCTGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192821808 1401 + 195804263 TACTTTTT---------------------------------------------AATGGAAATG-TATATATTCACCTAGGC---TATTCTT-CCTTACC-CAAGTTGAAACTG-AATAGTATGACCTAAACGTACATTTCGTGTGCTGGGAAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCGTA-------------GGTTTCCT-GTCATTAATTTGCTCACCAGTGCAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAAGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTCCAACTATCTCCACTACTGCAGGACACAGACACCATCTATAAATCTCACATTGTAACGACTAACACTTATCTTTGTTATTGTCACCTGGAC---TCTTTTATGCCAAAATA-AGAGTCTTA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCGTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGCAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTCAGAATCCTTC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAGTCACGTCTGAAACATGTGAAATATACCTAAGGACCCGAGGTCAGGGTTGAGTGTCCAAATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCC-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA-TTTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGGTGCATTAGAATCTTAGGAGTAAAATATCCCTCACAAAATTT----GA-TATCTT---ATCTGATTAGTTAATACAGACATATTACATTTTTCAACTAATTTTTTTTCTT---AAGAA----TTCTTTCAG--------AAACGGAGAAGCATGTAGTAACATACT----GATTTTAA--GGAACC-------TATGCTAATAATTTTAAGTAGTAAAACTT-------TA-----AACTTAAGAAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTCATTTAAGCTGCTCTACTAAGTGTTAGGGAAATACGAAAATTGA-AA-------GTGTGACCTTGTTGTCCAG-----TAAAGTAA-------TTTTATCGA---ATTTGGTAGACTCTTAATTGTCCCTAAGTATTCATTTTCCCTTTC--------T-TTTTTTTTTATTGTAGCTT-TTCTTTTGAAATATGCGTTGCCTCCCA-GACATTGC-AAAAT------GGTATAGTGAGTTCTGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3859050 1407 + 4876863 TACTTTTT---------------------------------------------AATGGAAATG-TATATATTCACCTAGGC---TATTCTT-CCTTACC-CAAGTTGAAACTG-AATAGTATGACCTAAACGTACATTTCGTGTGCTGGGAAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCGTA-------------GGTTTCCT-GTCATTAATTTGCTCACCAGTGCAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAAGTTTTTTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTCCAACTATCTCCACTACTGCAGGACACACACACCATCTATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCACCTGGAA---TCTTTTATGCCAAAATA-AGAGTCTTA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCGTCTTCTTGTCTGAC-AGAG--TGGGCCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGCAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTCAGAATCCTTC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAGTCACGTCTGAAACATGTGAAATATACCTAAGGACCCGAGGTCAGGGTTGAGTGTCCAAATTCAACCAGTTATTCACACGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCC-TTGACAGAGT-----------------------GTTGAGTATGA-AAT--AGATTTTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACCTGATGCATTAGAATCTTAGGAGTAAAATATCCCTCACAAAATCT----GA-TCTCTT---ATCTGATTAGTTAATACAGACATATTACATTGTTCAACTAATGTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAACGGAGAAGCATGTAGTAACATACT----GATTTTAA--GGAACC-------TATGCTAATAATTTTAAGTAGTAAAACTTA--AAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTTTGATATTCACGTATTATTAAAT-GCAATTTCATTTAAGCTGCTGTACCAAGTGTTAGGGAAATATGAAAATTGA-AA-------GTGTGACCTTGTTGTTCAG-----TAAAGTAA-------TTTTATCGA---ATGTGGTAGACTCTTAATTGTCCGTAAGTATTCATTTTCCCTCTC--------T-TTTTTTTTTATTGTAGCtt-ttcttttgaaatatgcattgcctccca-gacattgc-aaaat------ggtatagtgagttctggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112749664 1407 + 115148730 TACTTTTT---------------------------------------------AATGGAAATG-TATATATTCACCTAGGC---TATTCTT-CCTTACC-TGAGTTGAAACTG-AATAGTATGACCTAAACGTACATTTCATGTGCTGGGAAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCTTA-------------GGTTTCCT-CTCATTAGTTTGCTCACCAGTGTAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAC--TGGATTCGTAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAAATATTTAT---CAATACAGCAAAAATGTAGGATTTGTAGGATTTATGTATCTT--AACTATCTCCACTACTGCAGGACACAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCACCTGGAATCTTCTTTTATGCCAAAATA-AGAGTCTTA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTCACCTGATAAACCATCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGCAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTCAGAATCCCAC-AGGCGTTGGAGGAATAACTGAACTCAACAGGCAATCAATCACGTCTGAAACATGTGAAAAATACCTAAGGACCCGAGGTCAGGGTTTAGTGTCCAGATTCAACCAGTTATTCACACGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCC-TTGACAGAAT-----------------------GTTGAATACGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAAATATTCCTCACAAAATTT----GA-TATCTT---GCCTGATTAGTTAATACAGACATATTAAATTTTTCAACTAAT-TTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAACGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACC-------TATGCTAATAATTTTAAGTAGTAAAACTTA--AAACTA-----AAC--AAGATGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTCATTTAAGCTGCTGTAC----TGTTAGGGAAATATGAAAATTGA-AA-------ATGTGACCTTGTT---CAG-----TAAAGTCA-------TTTTATTGA---ATGTGGTAGACTCTTAATTGTCCCTAAGTAttcattttccctttc------ttt-tttttttttattgtagctt-ttcttttGAAATATATGTTGCCTCCCA-GACATTGC-AAAATGGTAACGGTATAGTGAGTTCTGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189036200 1419 + 190429646 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT-CCTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAATGTACATTTCATGTGCTGGGGAGAA---------------AAAGCCA--------CTGA-TGACCCCCTTCCCCTCA-------------GGTTTCCT-CTCATTAGTTTGACCACCACTGTAACCCCATTCAGGCCCCCAAGATAG-TGCCG--TTTTGTGTGCATAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTAGTTCCCATTCAAATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTTCCAACTGTCTCCACTACTGCAGGACGTAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTGTCTTTGTTATTGTCGCCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCCTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCGCTGACAGCTGTTGCATGGTGGAGTGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCCATCACATCTGAAACACGTGAAATACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCATATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAG---AGTTTATATGGAGTCA-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAATTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTCTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---GTGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC-----TTTT-TTTTTTTAAATTGTAGCAT-TTCTTTTGAAATATATGTTGCCTCCCA-GACATTGC-AAAAT------GTTATACTGAGTTCTGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187979076 1418 + 189454096 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT-CCTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAATGTACATTTCATGTGCTGGGGAGAA---------------AAAGCCA--------CTGA-TGACCCCCTTCCCCTCA-------------GGTTTCCT-CTCATTAGTTTGATCACCACTGTAACCCCATTCAGGCCCCCAAGCTAG-TGCCG--TTTTGTGTGCATAAGA-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTAGTTCCCATTCAAATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTTCCAACTGTCTCCACTACTGCAGGACGTAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTGTCTTTGTTATTGTCGCCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCCTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCGCTGACAGCTGTTGCATGGTGGAGTGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACGTGAAATACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCATATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAG---AGTTTATATGGAGTCA-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAATTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTCTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---GTGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC------TTT-TTTTTTTAAATTGTAGCGT-TTCTTTTGAAATATATGTTGCCTCCCA-GACATTGC-AAAAT------GTTATACTGAGTTCTGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24370402 1417 - 25927173 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT-CCTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAATGTACATTTCATGTGCTGGGGAGAA---------------AAAGCCA--------CTGA-TGACCCCCTTCCCCTCA-------------GGTTTCCT-CTCATTAGTTTGATCACCACTGTAACCCCATTCAGGCCCCCAAGCTAG-TGCCG--TCTTGTGTGCATAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTAGTTCCCATTCAAATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTTCCAACTGTCTCCACTACTGCAGGACGTAGACACCATCTATAAATCTCACATTGTAACCACTAACACTC-TCTTTGTTATTGTCGCCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCCTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCGCTGACAGCTGTTGCATGGTGGAGTGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACGTGAAATACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCATATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAG---AGTTTATATGGAGTCA-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAATTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTCTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---GTGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC------TTC-TTTTTTTAAATTGTAGCGT-TTCTTTTGAAATATATGTTGCCTCCCA-GACATTGC-AAAAT------GTTATACTGAGTTCTGGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3399992 1423 + 4669795 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT-CCTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAATGTACATTTCATGTGCTGGGGAGAA---------------AAAGCCA--------CTGA-TAACCCCCTTCCCCTCA-------------GGTTTCTT-CTCATTAGTTTGATCACCACTGTAACTCCATTCAGGCCCCCAAGCTAG-TGCCG--TTTTGTGTGCATAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTAGTTCCCATTCAAATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTtccaactgtctccactactgcaggacgtagacaccatctataaatctcacattgtaaccactaacacttgtctttgttattgtcgcctggaatcttctttaatgccaaaata-agagtctcc-aaagaatgaagccctgcaatttcact-gtccaacaacagaggttttacctgataaatcctcttctcgtctgac-agag--tgggccacagaaacatcgctgacagctgttgcatgatggagtgggagtaaggtcacTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACGTGAAATACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCATATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCA-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAGTTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAATGCAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAAGTTTAAATTACCTGGTCTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---GTGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC----TTTTT-TTTTTTTAAATTGTAGCGT-TTCTTTTGAAATATATGTTGCCTCCCA-GACATTGC-AAAAT------GTTATAGTGAGTTCTGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134357552 1404 + 135778131 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT--CTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAACGTACATTTCACGTGCTGGGAAGAA---------------AAAGCCA--------CTGA-TAACCCCCTTCCCCTCA-------------GGTTTCCT-CTCATTAGTTTGATCAC-----TAACCCCATTCAGGCCCCCAAGCTAG-TGCCG--TTTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATTAGAAATTTTCAATCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTGGTTTCCATCCAGATATTTAT---TAATACGGCAAAAATGTAGGATTTGCAGGATTTATATATCTTCCAACTGTCTCCACTACTGCAGGACGTAGACACCATCTATAAATCTCGCATTGTAACCACGAACACTTATCTTTGTTATTGTCACCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTGACCTGATAAATCCTCTTCTCGTCTGAC-AGAG--CAGGCCACAGAAACATCGCTGACAGCTGTTGCATGATGGAGGGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACGTGACGTACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCACATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGCCA-TTGATGGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGGTAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAACTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTCTT----AAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAATCTAATAATTAAGGTAATAATTTTAAGTAGTAAAACTTA---------------------AAGTAATAAAAAGGTGATAATAGGATAATTATT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTAGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---ATGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTCTTTTTTTTT-TTttttttaattgtagctt-ttcttttgaaatatatgttgcctccca-gacattgc-aaaat------ggtatagtgagttctggt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2820038 1421 - 2847728 TACTTTTT---------------------------------------------AATGGAAATGGTACATATTCACCTAGGC---TACTCTT-CCTTACC-TGAGTTGAAACTG-AACAGTATGATCTAAATGTACATTTCATGTGCTGGGGAGAA---------------AAAGCCA--------CTGA-TAACGCCCTTCCCCTCA-------------GGTTTCCT-CTCATTAGTTTGATCACCACTGTAACTCCATTCAGGCCCCCAAGCTAG-TGCCG--TTTTGTGTGCATAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATGAAAAATGTTTCCTAGTTCCCATTCAAATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTTCCAACTGTCTCCACTACTGCAGGACGTAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTGTCTTTGTTATTGTCGCCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTGCAATTTCACT-GTCCAACAACAGAGGTTTTACCTGATAAATCCTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACATCGCTGACAGCTGTTGCATGATGGAGTGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACA-GCAATCAATCACATCTGAAACACGTGAAATACACCTAAGGACCAGAGGTCAGGGTTTAGTGTCCATATTCAACCAGTTATTCACATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCA-TTGACAGAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATGCATTAGAATCTTAGGAGTAAACTGTTCCTCACAAAGTTT----GATTATCTT---ATCTGATTAGTTAATGCAGACATATTAAATT-TTCAACTAATTTTTTTTCTTAAGAAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTCTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTCAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---GTGTGGTAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC------TTT-TTTTTTTAAATTGTAGTGT-TTCTTTTGAAACACATGTTGCCTCCCA-GACATTGC-AAAAT------GTTATAGTGAGTTCTGGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 920621 1416 + 2368649 TACTTCTT---------------------------------------------AATGGAAATGATACATATTCACCTAGGC---TACTCTT---TTACC-TGAGTTGAAACTG-AACAGTATGATCTAAACATACATTTCATGTGCTGAGGAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCCCTCA-------------GGTTTCCT-CTCATTAGTTTGATCACCACTGTAACCCCATTCAGGCCCCCAAGCTAG-TGCCA--TTTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCGTAAGAGGTTTTGTCCATGAGGAATTTTCAGTCTAATGTCAAGTAATTGACAATG-AAAATGTTTCCTAGTTTCCATTCAGATATTTAT---TAATACAGCAAAAATGTGGGATTTGTAGGATTTATATATCTTCCAACTATCTCCACTACTGCAGGATGTAGACACCATCTATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCGCCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTCA-AAAGAATGAAGCCCTACAATTTCACT-GTCCAACAACAGAGGTTTTACATGATAAATCCTCTTCTCGTCTGAC-AGAG--TGGGCCACAGAAACCTCGCTGACAGCTGTTGCATGATGGAGTGGGAGTAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAAAATCCCAC-AGGCGTTGGAGGAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACGTGAAGTATACCTAAGGACCAGAGCTCAGGGTTTAGTGTCCAAATTCAACCAGTTATTCATATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTTATATGGAGTCG-TTGACAAAAT-----------------------GTTGAATATGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGAAACATTAGAATCTTAGGAGTAAATTATTCCTCACAAAATTT----GA-TATCTT---ATCTGATTAATTAATGCAGAC--ATTAAATT-TTCAACTAATTTTTTT-CTTAAGAAGAA----TTCTTTCAG--------AAATGGAAAAGCATGTAGTAACATACT----GACTTTAA--GGAACCTAATAATTAAGCTAATAATTTTAAGTAGTAAAACTTAAAAAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGTATCCTACTAAGATATTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATATTATTAAAT-GCAATTTTGTTTAAGCTGCTGTACTAAGTGTTAGGGGAATATGAAAATTGA-AA-------ATGTGACCTTGTTGTTCAG-----TAAAGTCA-----T-TTTTATTGA---ATGTGATAGACTCTCACTTGTCCCTAAGTATTCATTTTCCCTTTC-----TTTT-TTtttttaaattgtagctt-ttcttttgaaatatatgttgcctccca-gacattgc-aaaat------ggtatagtgagttctggt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189653035 1396 - 190850796 TACTTTTT---------------------------------------------AATGGAAATGGTATATATTCACCAAGGTATATATTCTT-CCTTACC-TGAGTTGAAACTG-AATAGT-------------ACATTTCATGTGCTGGGGAGAA---------------AAAGCAA--------CTGA-TAACCCCTTTTCTCTTA-------------GGTTTCCT-CTCCTTAGTTTGACCACCAGGGCAATCCCATTCAGGACCCCAAGGTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAC--TAGATTCATAAGATGTTTTGTCCATGAAGAATTTTCAGTCCAATGTGAAGCAATCGACAATG-AAAACGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTTCAACTATCTGCACTACCGTGAGACACAG--ACCGTTGATAAGTCTCACGTTGTAACCACTAACACTTATCTTTGCTATTGTCACCTGGAATCTTCTTTAGTGTCAAAATA-AGAGACTTA-AAAGAAGGAAGCCCTACAATTTCACT-GTCCAACAGCAGAAATTTTACTAGATAAATCCTCTTCTT-TCT-------------GTCACAGAAACATCTCCGACAGCTGTTGCATGATGGAGTGGGACGAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCAC-AGGCACTGGAGTAATAATTGAATTCAACAGGCAATCAATCACATCTGAAACACACAAAATATATCTACAGACTGGAGGTCGGGCTTTAGTGTCCACATTCAACCAGTTATTCAGATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTCATATGGAGTAA-TTGACAGAAT-----------------------GTTGAATGTGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATATATTAGAATCTTAGGAGTAAAGTATTCCTCACAAAATCT----GA-TGTCTTATTATCTGATTGATTAATACAGAAATATTAAATTTTTCAACTA--TTTTTTTCTTAAGAAGAATTACTTCCTTCAG--------AAACAGAAAAGCATTTAGTAATATATT----GACTTTAA--GGAATC-------TATGTTAATAATTTTAAGTAGTAAAATTTA--AAACTAAACTTAA--G---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTACTACGATACTTAGTTGGCAATTTAATTTCAAATTACCTGGTTTTCTCTGATACTCACAAACTATTAAAT-GCCATTTTGTTTAAGCTGCTGTACTAAGTGTCAGGGAAATATGAAAATTGA-AA-------ATGTGATCTTGTTGGTCAG-----CAAAGTCA-------TTTTATTGA---ATCTGGTAGACTCTTAATTGTCCCTAAGTATTCATTTTCCCTTTC------TTC-TTTTTTTTAATTGTAGCTT-TTCTTTTGAAATATATGTTGCTTCCAA-GACATTGC-AAAAT------GGTATAGTGAGTTCTGGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13144889 1398 - 14256875 CACTTTTT---------------------------------------------AATGGAAATGCTATATCTTCACCAAGGC---TATTCTT-CCTTACC-TGAGTTGAAACTG-AATAGTATGACCTAAATGCACATTTCATGTGCTGGCGAGAA---------------AAAGCAC--------CTGA-TAACCCCCTTTCTCTTT-------------GGTTTCCT-CTCATTAGTTTGACCACCAGTGCAATCCCATTCAGGCCCCCAAGCTGG-TGCCA--TCTTGCCTGAACGAGG-CTGGGGC----AAC--TGGATTCATAAGCGGTTTTGTCCATGAAGAATTTTCAGTCTGCTGTGAAGCAATTGACAGTG-AAAACGTTTCCTGGTTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTCCAACTATCCGCACTACTGCAAGACATAG--ACCATTGATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCACCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTTA-AACGAAGGAAGCCCTACAATTTCACT-GTCCAACAGCAGAAATTTTACTAGATAAATCCTCTTCTT-TCT-------------GTCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGAAGGAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAATCCCGC-AGGCATTGGAGTAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACATGAAATATATCTACAGACCAGAGGTTGGGATTTAGTGTCCAAATTCAACCAGTTATTCAGATGGTCTGAAAATGAAAATGTTTCATTTCTGAGAAGTTCATATGGAGTAA-TTGACAGAAT-----------------------GTTGAATGTGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATATATTAGAATCTTAGAAGTAAAGTATTCCTCACAAAATCT----GA-TATCTTATGATCTGATTAATTAATGCAGACATATTAAATTTTCTAACTA--TTTTTTTCTT---AAGAATTACTTCTTTCAG--------AAACAGAAAAGCATTTAGTAATATACG----GACTTTAA--GAAATC-------TATGTTAATAATTTTAAGTGGTAAAATTTA--AAACTA-----AA--G---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATTCTACTAAGATACTTAGTTGGCAATTTAATTTTAAATCACCTGGTTTTCTCTGATATTCACATACTATTAAAT-GCAATTTAGTTTAAGCTGCTGTACTAAGTGTTAGGGAAATATGAAAATTGA-AA-------ATGTGACCTTTTTGGTCAG-----TAAAGTCA-------TTTTATTGA---ATCTGGCAGGCTCTTAATGGTCCCTAAGTATTCATTTTCCCTTTC------TTC-TTTTTTTAAATTGTAGCTT-TTCTTTTGAAATATATGTTGCCTCCAA-GACATTGC-AAAAT------GGTACAGTGAGTTCTGGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1036363 1401 - 2196201 TACTTTTT---------------------------------------------AATGGAAATAGTGTATATTCACTAAGGC---TATTCTT-CCTTACC-TGAGTTGAAACTG-AATAGTATGACCTAAACGCATAGTTCATGTGCAGGGGAGAA---------------AAAGCAA--------CTGA-TAACCCCCTTTCTCTTA-------------GGTTTCCT-CTCATCAGTTTGACCACCAGTGTAATCCCATTCAGGCCCCCAATCTTG-CACCA--TCTTGTGTGCACAAGG-CTGGGGC----AAC--TGGATTCATAAGAGGTTTTATCTATGAAGAATTTTCAGTCTAATGTGAAGCAATTGACAATG-AAAACGTTTCCTGGTTTCCATCCAAATATTTAT---TAATA-AGCAAAGATGTAGGATTTGTAGGATTTCTATATCTTCCAACTGTCTGCACTACTGCAAGACATAG--ACCATCGATAAATCTCACACTGTAGCCGCTAACACTTATCTTTGTTATTGTCACCTGGAATCTTCTTTAATGCCAAAATA-AGAGTCTTA-AAAGAAGGAAGCCCTACAATTTCACT-GTCCAACAGCAGAAATTTTACTAGATAAATCCTCTTCTT-TCT-------------GTCACAGAAACATCTCTGACAGCTGCTGCATGATGGAGTGGGAGGAAGGTCACTTCCTGCAAATGTTA-GGGTTCTTAAGAACCCCAC-AGGCATTGGAGTAATAATTGAGCTCAACAGGCAATCAATCACATCTGAAACACATGAAATATATCTACAGACCAGAGGTTGGGATTTAGTGTCCAAATTCAACCTGTTATTCAGATGGTCTGAAAATGAAAATGTTTCATTTCAGAGAAGTTCATATGGAGTAA-TTGACAGAAT-----------------------GTTGAATGTGA-AAT--AGA--TTTTTTT--CTGTCTTCCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATATATTAGAATCTTAGGAGTAAAGTATTCCTCACAAAATCT----GG-TATCTTATTATCTGATTAATTAATACAGATATATTAAATTTTTGAACTA--TTTTTTTCTTAAGAAGAATTACTTCTTTCAG--------AAACAGAAAAGCATTTAGTAATATACT----GACTTTAA--GGAATC-------TATGTTAATAATTTTAAGCAGTAAAATTTA--AAACTA-----AA--G---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATTCTACTAAGATACTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATACTATTAAAT-GCAATTTTGTTTAAGCTGCTGTACTAAGTGTTAGGGAAATATGAAAGTTGA-AA-------ATGTGACCTTGTTGGTCAG-----TAAAGACA-------TTTTATTGA---ATCTGGTAGACTCTTAATGGTCCCTAAGTAttcattttccctttt------ttctttttttttaattgtagctt-ttcttttGAAATATACGTTGCCTCCAA-GACATTGC-AAAAT------GGTATAGTGAGTTCTGGT i cebCap1.NW_016107886v1 I 620 C 0 s aotNan1.NW_018492112v1 3423823 1383 - 5030052 TACTTTTT---------------------------------------------AATGGAAGTGGTATATATTCACCAAGGC---TATTCTT-CCTTACC-TGAGTTAAAACTG-AACAGTATGACCTAAATGCACATTTCATGTGCTGGGGAGAA---------------AAAGCAA--------CTGA-TAACCTCCTTTCTCTTA-------------GGTTTCCT-CTCATTAGTTTGACCACCACTGCAATCCCATTCAGGCCCCCAAGCTAG-TGCCA--TCTTGTGTGCACAAGG-CTGGGGC----AAT--TGGATTCATAAGAGGTTTTGTCCATGAAGAATTTTCAGTCTAATGTCAAGCAATTGACAATG-AAAGCGTTTCCTCATTTCCATCCAAATATTTAT---TAATACAGCAAAAATGTAGGATTTGTAGGATTTATATATCTTCCAACTATCTGCACTACTGCAAGACACAG--ACCGTCGATAAATCTCACATTGTAACCACTAACACTTATCTTTGTTATTGTCACCTGGAACCTTCTTTAATGCCAAAATA-AGAGTCTTA-AAAGAAGGAAGCCCTACAATTTCACT-GTCCAACAGCAGAAATTTTACTAGATAAATCCTCTTCTT-TCT-------------GTCACAGAAACATCTCTGACAGCTGTTGCATGATGGAGTGGGAGGAAGGTCACTTCCTGCAAATGTTA-GGATTCTTAAGAATCCCAC-AGGCATTGGAGTAATAATTGAACTCAACAGGCAATCAATCACATCTGAAACACATGAACTATATCTACAGACCAGAGGTTGGGATTTAGTGTCCAAATTCAACCAGTTATTCAGATGGTCTGAAAATGAAAATGTTTCATTTCGGAGAAGTTCATATGGAGTAA-CTGACAGAAT-----------------------GTTGAATGTGA-AAT--AGA--TTTTTTT--CTGTCTTTCTTTGAAAATCTTTGTGGATAAAGCTTAACATGATATATTAGAATCTTAGGAGTAAAGTATTCCTCACAAAATCT----GA-TGTCCTATTATCTGATTAATTAATACAGATATATTAAATTTTTCAACTA--TTTTTTTCTT---AAGAA----TTCTTTCAG--------AAAC--AAAAGCATTTCGTAA---------------TAA--GGAATC-------TATGTTAATAATTTTAAGTAGTAAAATTTA--AAACTA-----AACTT---AAGTAATAAAAAGGTGATAATAGGATAATTACT-ATTTGGCATCCTGCTAAGATACTTAGTTGGCAATTTAATTTTAAATTACCTGGTTTTCTCTGATATTCACATACTATTAAAT-GCAATTTTGTTTAAGCTGCTGTACTAAGTGTTAGGGAAATATGAAAATTGA-AA-------ATGTGACCTTGTTGGTCAG-----TAAAGTCA-------TTTTATTGA---ATCTGGTAGACTCTTAATTGTCCCTAAGTATTCATTTTCCCTTTC------TTC-TTTTTTTTAATTGTAGCTT-TTCTTTTGAAATATATGTTGCCTCCAA-GACATTGC-AAAAT------GGTATAGTGAGTTCTGGT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86639331 1379 - 129401213 CATAAGCT---------------------------------------------AGAGGCAATG-----TATTTACATATGT---TATGTTT--AAAGTC-TGGATTAAAAATGTAATGGCTTTTCCTAAAGGAATATTGCATATAATATGGAGTA---------------AAATTCA--------GTGA---AGCCCCTTTCTCTTACATTTCTTCTCATTGTTTCTT-CTCATTTATTTGATTAGTAATTTAATTCCATTCAGCTTCCCAAAGTAGTTGCCAACTTCTATATGCACAGGGCCTGGGCC----AATCATGTTTTTAAAATAGGTCACATCTATAAGGAAATTTCTCTCGTATGCAAAATCACAAACAGCC-AAAATGCCTTCTGGATTTAGTCCCAACTTTTATTCCTAACTTGACAAAAACTTAGTATCTGTAAGATTTG----------AAGCATTTCTGCTGCAGCAAGACAAGG--GCAGGCTATAAATCTCACATTAAAATCCACAGTATTTGTCTTTGTTTTTGTCACCTGAGATTTTTGTCATCGTTGAAATA---AGTCTTACCAAAAAGGAGGCCCCTGAATTGTCCT-GGTGGAAGATAAAGGACTTGCTATATAAACCATACCTCTGTGTGACGATGG--TCAGTCA-AGAGACATCCTTCGCAGCTCTTGCCTGATGGGGCAAGGTTAAGGTCAGTTCCTGCATATGTTA-GGGTTTTTAAGAATCCCCCTTAGCACTGGAGACATAATTGGTCTAAACAAGCAATCCATCATATTGGAACCATGTGGCATGCACAGAAAGATCGAAGGTTAGCATCTAGTGTCCCAAGTCACCCAATTGTTCAGATTGTC-GGAAAGAAAAAGAATTAACTTCTGAAATGTTTACAGGGGGTTA-TTCCTATGGA-----------------------ACTGAATAGGG-AACTAAGA--TGTTTCTGGCTGTCTT-CTTTGGAAATTCATATA---AAAGACCAACATAATA-GCCAGAATTTTATGAGTAAAGAATTTGTCTCAAAATTT----GATGATATT---GTCT------TTGAACCATATAATTCACACT---------GAGTTTTTCCTTCAGAACAATTATTCATTTCAG--------AATCTATAGAGTAATTATTAACATATTTTTAAGTTTTAA--GAAGTA-------TATGTTAATA---TGAAGTACTGTACTTTAGAAGAATA-----TAATT------------------GATATTAAAGTGCTTGCTAATTTAGTGTATTACGAATACTTTTAGTGGGC-TTTTAATTTTAAGTTACTTTGTTTTCTTGTATATTTCTCTATTATTAAATAAAAACTTTGCTCCAGCTTCTGTAC----TGTTAGGGAAATATAATAACTAA-AA-------GTATGGACTTGTTCTTCAA-----GATAGCCA-----TATTTTTTCCATTCATGATACAGGTTCTTGATTATCCCTAAGTACTTAGGAT-----TC------ATT-TTGGTTCTAACTG--GTTG-TTGTATTTAGGAATATGCTATATTGCA-AAGATTAC-AAAAA------------ATGAGTTCTGGT i mm10.chr8 C 0 I 1713 s canFam3.chr16 16986916 1410 - 59632846 TATTTTTTAAAAATGGCAACAGcacacacacacacatatacacacagacacaAAATGGCAACAGCACATAATCACCGAGGC---TATTATT-TCCTACCTTGAGTCGAAACTG-AATAATTTGATCTAAAAGCGGATTTCATGTTCTAGGGAAAA---------------ACAATCACAAAAGTTCTGT-CAACCCCTTTTCTCTCA-------------AGATTCTT-CTGATGATTCTGATTATCAGTGTAATTCCAACCAAGCCCAAAACAAGG-TGCCA--AGTTC------------CTGGGGCACTTAGT--TGAACTCGTAAGAGTTTATGTGCAGGGGGAATTTTCAGCC-------AAGTAATTGACAACT--AAATTTTTCCTGGTTTCAATCCAAATATTTATTCTTAACATGGCAAAAGTTTAAGATTTGTACTATTTACATAGCTTCCAACTATCTCCATAGCTGCAAGACATGG--ACCATATATAAGTCCCATGTGGTAATCACTAACATTTATCTTTGTTATTGTCACCTGGTATCTTCATCAATGTCAAAATAAAGACTCTTA-AAAAAATGAAACTGTGCAGTTTTACTGGCCCAACCACAGAGGTTTTACTGAATAAACCCTATCACTGCATGAC-AGAGCATGGGCAGCAGAAACATCTCT-ACAGCTGTTGTATGATGGAGTAGAATAAAGGTCATTTCCTGCAAATGTTAGGGGTTTTTAAGTATCCCAC-AGGCATTGGAGAAATAATTGGACTGAACAAGCAATCAATCATATTTGAAGCATGTGAAGTATATCTAAGGACCAAAGGTCAGGATTTAATGTCCAAATTCATCCAATTGTTCAGAT-GTCTGAAAATAAAGAT--TTAACTTCACAGGCATTTACATGGAGtaatttaattgaatttaagttaaatataaataaattagttgaatataa-aat--aga--ttttttt-----tCTTTCTTTGAAAATCTTTGTTGGTAAAGATTAATACGATAAATTAGAAAC-------TAAATGATCTCTC-TGaaattt----ta-tttatt---attcaaataattaatatGGGCATATTGAAGTTTTTAACTGATTTTTCTTTGT-----TAC----TTCTTTCAT--------AAAGTAAAAA-----TAATAACAT--T----GGTTTTAA------TT-------GATGTTAATAATTTTAA---------------GAATGA-----AATTT---A--------------------AGAATAACTACT-GTTTAACATTGAACTAAGATATTTAGTTGACAACTTAATATTAAGTCATCTGGTTCTCTTTTAGATTCATATATTATTAAAT-GCAATTTTGCTTAAACTACTGTAA----TGTTAGGG-AATATGAAATTTAAGAA-------GTGTGATTCTGTA---CAAGATTTTAAATCCT-----TTTTTTTTTTA---GTGTGACAGACTTCTAATTGTTCCTAAATATCCAATGCCCTCTTC------GTT-CTTT----AATTGCaacttcttattttgaaatat--gttgccttcca-gaagtttc-aaaat------agtcatgagcattctgt- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1485971 1382 - 2520184 -----------------------------------------------------AATTGAAAAGGGACGTCTTCACCGAAGC---TATTTTTTTCCTTCT-TGAGTTGAAGCTC-AGTAGTTTGCTCTAAATGCACATTTCACATACTGGGGAGAGGAAAAAAAACCCCACAAAATAA--------CTCAGTGAATCCTTTTCTCTTA-------------AGATTCCTCCTAATTCCTTCG--TACCCGTTTAGTTCGTTTCAGGTCTCAAAGCCAG-TCCAG--CTTCCTCTACACAGTG-----GAC----TCC--TGAAGTGGCCAGTAGCCCCAT------GGAAGGTCCAATCTAATGACAAGGAACTGACAACT--AAACATCTCCTTGACT-AATCCAAATATTTATTCCTAGCAT-GCAAAAATTTAGGAACTGTTGCATTGATGCAGCTTCCAGCTATGCCCACTGCTGCAAGACAAGG--ATTAGCTATAAATCTCCC-TTGTAATCACTACAATTTGGTTTTGTTATTGTCACCTGGCATCTTCATCAATGTCAAAATA-ATAGTCTTG-AAGA-----------------------GGCCAGTAATGGAAGTCCCACCCGGTGAGCCACC----------GC-AGCG--TC-ACCGCAGAG-CATCTGTGACAGCTGCTGCAGGACGGAGTGGGGCAAAGGTCACTTCCTGCAAAAGCTC-AGGTT-TTAAGAATCCCCC-TGGTACTAGGGGAATAATCGAACTCAACAAGCAATCAATCATATTTGAAGAATGGGAAGTATATCTGAGGACCAGA---CAGAGTTAAA-GTCCAAATTCACCCAATTGTTTAGATTGCCTGGAAAT-AAAATACTTTATTTCAGAGAAGTTTACATGGAATGA-TTTACATGGA-----------------------GTTGAGGATGACAAT--AAA--AAGTTTT--TTGTCTTCCCTTTAAGATCTTTGTCGATAAAGATTAATATGATAAATTAGAATCTTAGGAATTAAAGACCTCATCCCAAATTTCCTAAATTTCATT---ATCCTAGAAATTAAT--AGACATATTAAAGTATTATAGTTGATTTATTTCTTAAAGAGGATTACTTCTTTCAGaaaataaaaaataaaaaaacatttaataGTATATT----GGCTGCTATTGGGACC-------TATGTTAATAATTTTAA---------------GAACTA-----AATTTAAAAAGTAATAAAAAAGTGATA-TGTGATAATTACT-ATTTAGGATCCCACTAAGATATTTAGTTGGTAATTTGATTTTAAATTGCCTGGTTTTCCCTTAGATTCatatattattaaaa-acaattttatttaaGCGACTGTATTAAGTGCTAGGGAAACATAAAAATTAA-AAAAAAAAGATTTGACCCTGCCCTTCAA-----GACACTAAAAAATT-ATTTGTAGT---GTTGAGCA-ACTCCTAATTGTCTCTCAGCATCCATTGTCTGCTTC------Gtt-ttttt----attatgactt-tttatttttaa-atagctcaccccataggaaattgcgaaaat------ggtaaaaagagccccctt i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=24922.000000 s hg38.chr4_KI270789v1_alt 152484 2 + 205944 gt s panTro5.chr4 192939545 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823209 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860457 2 + 4876863 gt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751071 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189037619 2 + 190429646 GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980494 2 + 189454096 GT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371819 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401415 2 + 4669795 GT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358956 2 + 135778131 gt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821459 2 - 2847728 GT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922037 2 + 2368649 gt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654431 2 - 190850796 GC i calJac3.chr3 C 0 I 48 s saiBol1.JH378165 13146287 2 - 14256875 Gt i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 1037764 2 - 2196201 Gt i cebCap1.NW_016107886v1 C 0 I 135 s aotNan1.NW_018492112v1 3425206 2 - 5030052 Gt i aotNan1.NW_018492112v1 C 0 I 3 s canFam3.chr16 16988326 2 - 59632846 at i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1487353 2 - 2520184 gt i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86640710 1713 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=-2413.000000 s hg38.chr4_KI270789v1_alt 152486 5 + 205944 ---attct s panTro5.chr4 192939547 4 + 194502333 ---Attc- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823211 4 + 195804263 ---ATTC- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860459 4 + 4876863 ---attc- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751073 4 + 115148730 ---Attc- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189037621 4 + 190429646 ---Attc- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980496 4 + 189454096 ---Attc- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371821 4 - 25927173 ---Attc- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401417 4 + 4669795 ---Attc- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358958 4 + 135778131 ---attt- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821461 4 - 2847728 ---Attc- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922039 4 + 2368649 ---attc- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654481 3 - 190850796 ---cct-- i calJac3.chr3 I 48 C 0 s saiBol1.JH378165 13146292 3 - 14256875 ---cct-- i saiBol1.JH378165 I 3 C 0 s aotNan1.NW_018492112v1 3425211 3 - 5030052 ---ctt-- i aotNan1.NW_018492112v1 I 3 I 118 s canFam3.chr16 16988328 4 - 59632846 ---attt- i canFam3.chr16 C 0 I 1915 s dasNov3.JH570353 1487355 5 - 2520184 accat--- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1037766 135 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e mm10.chr8 86640710 1713 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=273.000000 s hg38.chr4_KI270789v1_alt 152491 1 + 205944 t s panTro5.chr4 192939551 1 + 194502333 t i panTro5.chr4 C 0 C 0 s dasNov3.JH570353 1487360 1 - 2520184 t i dasNov3.JH570353 C 0 I 1657 e calJac3.chr3 189654484 0 - 190850796 C e cebCap1.NW_016107886v1 1037766 135 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3425214 118 - 5030052 I e saiBol1.JH378165 13146295 0 - 14256875 C e colAng1.NW_012116221v1 922043 0 + 2368649 C e manLeu1.NW_012102221v1 2821465 0 - 2847728 C e chlSab2.chr7 134358962 0 + 135778131 C e cerAty1.NW_012001672v1 3401421 0 + 4669795 C e macNem1.NW_012013133v1 24371825 0 - 25927173 C e macFas5.chr5 187980500 0 + 189454096 C e rheMac8.chr5 189037625 0 + 190429646 C e nomLeu3.chr7b 112751077 0 + 115148730 C e gorGor5.CYUI01015356v1 3860463 0 + 4876863 C e panPan2.chr4 192823215 0 + 195804263 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=-5449.000000 s hg38.chr4_KI270789v1_alt 152492 10 + 205944 -tttttttttt s panTro5.chr4 192939552 10 + 194502333 -tttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823215 6 + 195804263 -----Cttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860463 3 + 4876863 --------ttt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189037625 6 + 190429646 -----tttttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980500 6 + 189454096 -----ttcttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371825 6 - 25927173 -----tttttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401421 6 + 4669795 -----tttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358962 5 + 135778131 -----ttttt- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821465 6 - 2847728 -----tttttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922043 5 + 2368649 -----ttttt- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654484 10 - 190850796 tctcctcctc- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13146295 10 - 14256875 cctcctcctc- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1037766 135 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3425214 118 - 5030052 I e nomLeu3.chr7b 112751077 0 + 115148730 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=30507.000000 s hg38.chr4_KI270789v1_alt 152502 8 + 205944 tt--tttttt s panTro5.chr4 192939562 8 + 194502333 tt--tttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823221 8 + 195804263 tt--tttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860466 8 + 4876863 tt--tttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751077 7 + 115148730 -t--tttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189037631 10 + 190429646 ttttgttttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980506 8 + 189454096 tt--gttttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371831 10 - 25927173 tttgtttttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401427 8 + 4669795 tt--gttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358967 6 + 135778131 ----tttttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821471 9 - 2847728 tt-gtttttt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922048 6 + 2368649 ----tttttt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654494 8 - 190850796 ct--cctcct i calJac3.chr3 C 0 I 35 s saiBol1.JH378165 13146305 8 - 14256875 ct--cctcct i saiBol1.JH378165 C 0 I 136 s aotNan1.NW_018492112v1 3425332 8 - 5030052 tt--tttttt i aotNan1.NW_018492112v1 I 118 I 2 e cebCap1.NW_016107886v1 1037766 135 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=4683.000000 s hg38.chr4_KI270789v1_alt 152510 4 + 205944 ttgg s panTro5.chr4 192939570 4 + 194502333 ttgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823229 4 + 195804263 ttgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860474 4 + 4876863 ctgg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751084 4 + 115148730 ttgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189037641 4 + 190429646 ttta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980514 4 + 189454096 ttta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371841 4 - 25927173 ttta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401435 4 + 4669795 ttta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358973 4 + 135778131 ttta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821480 4 - 2847728 ttta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922054 4 + 2368649 ttta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654537 2 - 190850796 tt-- i calJac3.chr3 I 35 C 0 s aotNan1.NW_018492112v1 3425342 2 - 5030052 tt-- i aotNan1.NW_018492112v1 I 2 C 0 e cebCap1.NW_016107886v1 1037766 135 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e saiBol1.JH378165 13146313 136 - 14256875 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=6572472.000000 s hg38.chr4_KI270789v1_alt 152514 697 + 205944 agagacggacttgttctgtctctcaggctggagggcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagcgatcctcttgcctcaa---cctcctgagtagctagaactacaatcacccctcaccatgcccagctaatttt-taaattttttgtagagatgaggtccgctatgttgcccaggctgatttagaactcctggcctcaagggatcctcctgctttggtttcccaaagcgctgggatt-caggcatgagccactgtgcccagacgtaattctggcgtattcttaagccagtgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaagaggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttcTTTCTGTC-----TTTTGTG---TTTATAGTTCTTTTTCTGTCTTCCTTTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATGTGTTCAGCCATCACCACCCAGTCCCAGTTAGAATGAGGGTACAGAACTGCTTCATCAGTCTCATGAGAAGGTGTGACTGAAAGGAGCAGTGCAAAGATGCTCCTTTGtcctttcagtcacgctttctccctgactctgacctttggcaccagctgttaggtcttcacactctaattttac s panTro5.chr4 192939574 702 + 194502333 agagatggacttgttctgtctctcaggctggagggcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagcgatcctcttgcctcaa---cctcctgagtagctagaactacaatcacccctcaccatgcccagctaatttt-taaattttttgtagagatgaggtccgctatgttgcccaggctgatttagaactcctggcctcaagggatcctcctgctttggtttcccaaagcgctgggatt-caggcatgagccactgtgcccagACTTaattctggcgtattcttaagccagtgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaagaggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttctttctgtcttttgttttgtG---TGTATAGTTCTTTTTCTGTCTTCCTTTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATGTGTTCAGCCATCACCACCCAGTCCCAGTTAGAATCAGGGTACAGAACTGCTTCATCAGTCTCATGAGAAGGTGTGACTGAAAGGAGCAGTGCAAAGATGCTCCTTTGtcctttcagtcacgctttctccctgactctgacctttggcaccagctgttaggtctttacactctaattttac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823233 702 + 195804263 agagatggacttgttctgtctctcaggctggagggcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagcgatcctcttgcctcaa---cctcctgagtagctagaactacaatcacccctcaccatgcccagctaatttt-taaattttttgtagagatgaggtccgctgtgttgcccaggctgatttagaactcctggcctcaagggatcctcctgctttggtttcccaaagcgctgggatt-caggcatgagccactgtgcccagACTTaattctggcgtattcttaggccagtgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaagaggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttctttctgtcttttgttttgtG---TGTATAGTTCTTTTTCTGTCTTCCTTTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATGTGTTCAGCCATCACCACCCAGTCCCAGTTAGAATCAGGGTACAGAACTGCTTCATCAGTCTCATGAGAAGGTGTGACTGAAAGGAGCAGTGCAAAGATGCTCCTTTGtcctttcagtcacgctttctccctgactctgacctttggcaccagctgttaggtctttacactctaattttac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3860478 702 + 4876863 agagacggacttgttctgtctctcaggctggagggcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagcgatcctcttgcctcaa---cctcctgaatagctagaactacaatcacccctcaccatggccagctaatttt-taaattttttgtagagatgaggtccgctatgtcgcccaggctgatttagaactcctggcctcaagggatcctcctgctttggtttcccaaagcgctgggatt-caggcatgagccactgtgcccagacttaattctggcgtattcttaagccagtgtcccctaatgaaaatatcttccaggacctcagtgcctggtccaaatgaggaagctgttaagaggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttctttctgtcttttgttttgtG---TGTATAGTTCTTTTTCTGTCTTCCTTTGAAAATCTTTCTGGATAAAGATGTTCCCACAGATTTCTGTAGATGTGTTCAGCCATCACCACCCAGTCCCAGTTAGGATCAGGGTACAGAACTGCTTCATCAGTCTCATGAGAAGGTGTGACTGAAAGGAGCAGTGCAAAGATGCTCCTTTGtcctttcagtcacgctttctccctgactctgacctttggcaccagctgttaggtcttcacactctaattttac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751088 701 + 115148730 agagacagacttgttctgtctcccaggctggagtgcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagcgatcctcttgcctcaa---cctcctgagtagctggaaccacaatcacccctcaccatgcgcagctaatttt-taaattttttgtagagatgaggtctgctatgttgcccaggctgatctggaactcctggcttcaagggatcctcctgctttggtttcctaaaacgctgggatt-cgggcatgagccactgtgcccagACTTaattctggcatattcttaagccagtgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaagaggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttctttctgtctttcgttttgtG---TGTATAGTTCTTTTTCTGTCTTCCTTTGAAAATCTTCCTGGATAAAGATGTTTCCACAGGTTTCTGTAGATGTGTTCAGCCATCACTACCCGGTCCCAGTTAGAATCAGGGTACAGAACTGCTTCATCAGTCTC-TGAGAAGGTGTGACTGAAAAGAGCAGTGCAAAGATGCCCCTTTGTccttccagtcacgccttctccctgactctgaccttcggcaccagctgctaggtcttcacactctaattttac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189037645 702 + 190429646 agaaactgacttgttctgtctcccaggctggagtgcagt-gtgtgatcatggctcactgttgcctcaacctcccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcaccgcgcccagctaatttt-caatttttttgtagagatgaggtctgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattataagcatgagccactgtgcccagACTTaattctggcgtattcttaagccaatgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaataggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttcTTTCTGTCTTTTGTGTTGCG---TGGATAGTTCTTTTTCTGTCTTCCATTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTTGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGCACAAAGATAATCCTTTGtcctttcagtcacacctcctccctgactctgacctttggcaccagctgctaggtgttcacactctaattttac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187980518 702 + 189454096 agaaactgacttgttctgtctcccaggctggagtgcagt-gtgtgatcatggctcactgttgcctcaacctcccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcaccgcgcccagctaatttt-caatttttttgtagagatgaggtctgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattacaagcatgagccactgtgcccagACTTaattctggcgtattcttaagccaatgtcccctaatgaaaatatcttccaggacctcagtgcgtggtccaaatgaggaagctgttaataggtacaatactattaacACATGTACATACAGATTTCAACAGCATTTAAGTTCAGTTTTTTCTTTCTGTCTTTTGTGTTGCG---TGGATAGTTCTTTTTCTGTCTTCCATTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTTGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGCACAAAGATAATCCTTTGtcctttcagtcacacctcctccctgactctgacctttggcaccagctgctaggtgttcacactctaattttac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24371845 702 - 25927173 agaaactgacttgttctgtctcccaggctggagtgcagt-gtgtgatcatggctcactgttgcctcaacctcccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcaccgcgcccagctaatttt-caatttttttgtagagatgaggtctgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattacaagcatgagccactgtgcccagACTTaattctggcgtattcttaagccaatgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaataggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttcTTTCTGTCTTTTGTGTTGCG---TGGATAGTTCTTTTTCTGTCTTCCATTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTTGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGCACAAAGATAATCCTTTGtcctttcagtcacacctcctccctgactctgacctttggcaccagctgctaggtgttcacactctaattttac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3401439 703 + 4669795 agaaactgacttgttctgtctcccaggctggagtgcagtggtgtgatcatggctcattgttgcctcaacctcccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcactgcgcccagctaatttt-caatttttttgtagagatgaggtctgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattacaagcatgagccactgtgcccagACTTaattctggtgtattcttaagccaatgtcccctaatgaaaatatcttccaggacctaagtgcatggtccaaatgagggaactgttaataggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttcTTTCTGTCTTTTGTGTTGCG---TGGATAGTTCTTTTTCTGTCTTCCATTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTTGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTAACTGAAAGGAGCAGCACAAAGATAATCCTTTGtcctttcagtcacacctcctccctaactgtgacctttggcaccagctgctaggtgttcacactctaattttac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134358977 703 + 135778131 agaaactgacttgttctgtctcccaggctggagtgcagtggtgtgatcatggctcactgttgcctcgacctcccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcaccacgcccagctaatttt-caatttttttatagagatgaggtccgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattacaagcatgagccactgtgcccagacttaattctggcgtattcttaagccaatgtcccctaatggaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaataggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttctttctgccttttgttttgtG---TAGATAGTTCTTTTTCTGTCTTCTGTTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTCGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGTACAAAGATGATCCTTTGTCCTTTCAGTCACACCTCCTCCCTGACTCTGACCTTTGGCACCAGTTGCTAGGTCTTCACACTCTAATTTTAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2821484 703 - 2847728 agaaactgacttgttctgtctctcaggctggagtgcagtggtgtgatcatggctcactgttgcctcaaccttccaggaacaagtgatcctctagcctcag---cctcctgagtagctagaactacaatcactcatcaccgcgcccagctaatttt-caatttttttgtagagatgaggtctgctatgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcagtctcccaaagtgctgggattacaagcatgagccactgtgcccagACTTaattctggcgtattcttaagccaatgtcccctaatgaaaatatcttccaggacctcagtgcatggtccaaatgaggaagctgttaataggtacaatactattaacacatgtacatacagatttcaacagcatttaagttcagttttttcTTTCTGTCTTTTGTGTTGCG---TAGATAGTTCTTTTTCTGTCTTCCATTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTTGTTCAGCCACCACCACCCGGTCCCAGTTAGAATCGGGGCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGCACGAAGATAATCCTTTGtcctttcagtcacacctcctccctgactctgacctttggcaccagctgctaggtgttcacactctaattttac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922058 654 + 2368649 agaaactgacttgttctgtgtcccaggctggagtgcagtggtgcgatcatggctcactgttgcctcgacctcccaggaacaagtgatcctctagcctccacctcctcctgagtagctagaactacaat------------------------------------------------gatccgctctgttgcccaggctgatctagaactcctggcctcaaatgatcctcctgcttcggtctcccaaagtgccgggattacaagcatgagccgctgtgtccagacttaattctggcgtattcttaagccaacgtcccctaatgaaaatatcttccaggacctcagtgcatggttcaaatgaggaagctgttaataggtacaatactattaacacatgtacacacagatttcaacagcatttaagttcagttttttcTTTCTGTCTTTTGT-----G---TAGATAGTTTTTTTTCTGTCTTCTGTTGAAAATCTTTCTGGATAAAGATGTTTCCACAGATTTCTGTAGATTCGTTCAGCCACCACCACCTGGTCCCAGTTAGAATCAGGCCACAGAACTGCTTTATCAGTCTCAGGAGAAGGTGTGACTGAAAGGAGCAGCACAAAGATGATCCTCTGtcctttcagtcacaccttctccctgactctgacctttggcaccagctgctaggtcttcacactctaattttac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189654539 679 - 190850796 agaggcggacttgttctgtgacctgggctggaatgcagtgatgtgatcacggctcactgttgccctgacctcccaggaacaagcgatcctcttgcctcag---actcctgagtagctagaactacaatcactcatcaccatgcccagctaattaaaatttttttttgtagagatgaggtgcactgtgttg-ccaagctgatctaggactcctggcctcaagggatcctcctgcttccgtctcccagatcgctgggattacaggcatgagccactgtgcccagACTTaattctggcgtattcttaagtcagtgtctcctaatgaaaatgttttccatgacctcagtgcatgctccaaatgaagaagctgttaataggtacaatactactaacacatgtacatacagatttcaacagcatttaaattcacatttttctttttgtCTCTTGTTTTGTG---TGTATAGTTCTTTTTCTGTCTGTCTTTGAAA----TTCTGGATAAAGATTCCTCTGCAGATTTCTGTAGATTTATTCAGCCACCAGCACCCAGGCCCGGTCAGAATTAGGGTACAGAACTGTTTCATCAGTTTCATAAAAAGGTGTGGTGGAAAGGAGCAGTGTCCAGACATTCCTTCGTCCTTCCAGTC--------------------ACCATTAGCAGCAGGTGTTAGGTCTTCACACCGtgattttaa i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13146449 703 - 14256875 agagacaggcttgttctgtcccctgggctggaatgcagtgatgtgatcatgactcactgttgcgctgacctcccaggaacagacaatcctcttgcctcag---cctcctgagtagctagaactacaatcactcatcaccatgcccagctaattttttaatttttttgtagagatgaggtgtgctgtgttg-ccatgccgatctagaactcctggcctcaagggaccctcctgcttccatctcccaaattgctgggattataggcatgagccactgtgcccagACTTAATTTTGGCGTATTCTTAAGTCAGTGTCTCCTAATGAAAATGTTTTCCATGACCTCAGTGCATGCTCCAAATGAAGATGCTGTTAATAGGTACAATACTATTAACACATGTACATCCAGATTTGAACAGCATTTAAATTCACGTTTTTCTTTTTGTCTCTTGTTTTGTG---TGTATAGTTCTTTTTCTGTCTTTCTTTGAAAATCTTTCTGGATAAGGATTTTCCCACAGATTTCTGTAGATTTGTTCAGCCATCACCACCCAGGCCTGGTTAGAATTAGGGTACAGAACTGTTTCATCAGTTTCATGAGAAGGTGTGGCAGAAAGGAGCAGTGTCCAGACGCTCCTTTGtcctttcagtcacaccttctccccaactgtaaccgttagcaccaggtgttaggtcttcacaccgtaattttac i saiBol1.JH378165 I 136 I 1 s cebCap1.NW_016107886v1 1037901 703 - 2196201 agagacggacttgttctgtctcctgggctggaatgcagtgatgtgatcctgactcactgttgccctgacctcccaggaacaggcgaccgtcttgcctcag---cctcctgcgtagctagaactacaatcactcatcaccatgcccagctaattttttaatttttttgtagagatgaggtacactatattg-ccatgctgatctagaactcctggcctcaagggaccctcctgcttccatctcccaaatcactgggattataggcatgagccactgtgcccagACTTAATTCTGGTGTATTCTTAGGTCAGTGTCTCCTAATGAAATTGTTTTCCATGACCTCAGTGCATGCTCCAAATGAAGAAGCTGTTCATAGGCACAATGCTATTAACACATGTACATATGGATTTCAACAGCATTTAAATTCACATTTTTCTTTTTGTCTCTTGTTTTGCGTTCTTTTTCTTTCTTTTTCTGTCTTTCTTTGAAAATCTTTCTGGATAAAGATTTTCCCACAGATTTCTGTTGATTTGTTCAGCCGTCACCACCCAGGCCCGGTTAGAATTAGGGTACAGAACTGTTTCATCAGTTTCATG---AGGTGTGGCGGAAAGGAGCAGCGTGCAGACgcccctttgttctttcagtcacgccttctccccaactgcaaacgttagcaccaggtgtcaggtcttcacaccataattttac i cebCap1.NW_016107886v1 I 135 I 1 s aotNan1.NW_018492112v1 3425344 692 - 5030052 agagacggacttgttctgtctcctgggctggaatgcaatgatgtgatcatggctcactgttgctctaacctcccaggaacaagcgatcctcttgcctcag---cctcctgagtagctagaactacaatcactcatcaccatgcccagctaattttaaaatttttttgtagatatgaggtgtactgtgttg-ccaagctgatctagaactcctggcctcaagggaccctcctgcttccgtctcccaaatagctgggattacaggcatga--cactgtgcccagACTTAATTCTGGCATATTCTTAAGCCAATGTCTCCTAATGAAAATGTTTTCCATGTT-----TGCATGCTCCAAATGAAGAAGCTGTTACTAGGTACAATACTATTAACACACGTACATACAGATTTCAACAGCATTTAAATTCACGTTTTTCTTTTTGTCTCTTGTTTTGTG---TGTATACTTCTTTTTCTGTTTTTCTTTGAAA----TTCTGGATAAAGATTTTCCCACAGATTTCTGTAGATTTGTTCAGCCATCACCACCCAGGCCCGGTTAGAATTAGGGTACAGAACTGTTTCATCAGTTTCATGAGAAGGTGTGGCGGAAAGGAGCAGTGTCCAGATGCTCCTTTGTCCTTTCAGTCACACCTTCTCCCCAACTGTAACTGTTAGCACCAGGTGTTAGGtcttcacaccataattttac i aotNan1.NW_018492112v1 C 0 I 1417 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=138628.000000 s hg38.chr4_KI270789v1_alt 153211 15 + 205944 actttaagaatggta s panTro5.chr4 192940276 15 + 194502333 actttaagaatggta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823935 15 + 195804263 actttaagaatggta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3861180 15 + 4876863 actttaagaatggta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751789 15 + 115148730 acttcaagaatggta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189038347 15 + 190429646 actttaagaatggta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187981220 15 + 189454096 actttaagaatggta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24372547 15 - 25927173 actttaagaatggta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3402142 15 + 4669795 actttaagaatggta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134359680 15 + 135778131 ACTTTAAGAATGGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2822187 15 - 2847728 actttaagaatggta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922712 15 + 2368649 actttaagaatggta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189655219 15 - 190850796 acttcaagaatggca i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13147153 15 - 14256875 acttcaagaatggca i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1038605 15 - 2196201 acttcaagaatggta i cebCap1.NW_016107886v1 I 1 I 810 e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=27871.000000 s hg38.chr4_KI270789v1_alt 153226 4 + 205944 tgta s panTro5.chr4 192940291 4 + 194502333 tgta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823950 4 + 195804263 tgta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3861195 4 + 4876863 tgta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751804 4 + 115148730 tgta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189038362 4 + 190429646 tgta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187981235 4 + 189454096 tgta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24372562 4 - 25927173 tgta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3402157 4 + 4669795 tgta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134359695 4 + 135778131 TGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2822202 4 - 2847728 tgta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922727 4 + 2368649 tgta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189655234 4 - 190850796 cata i calJac3.chr3 C 0 I 1410 s saiBol1.JH378165 13147168 4 - 14256875 cata i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=12330.000000 s hg38.chr4_KI270789v1_alt 153230 2 + 205944 ag s panTro5.chr4 192940295 2 + 194502333 ag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823954 2 + 195804263 ag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3861199 2 + 4876863 ag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751808 2 + 115148730 ag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189038366 2 + 190429646 ag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187981239 2 + 189454096 ag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24372566 2 - 25927173 ag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3402161 2 + 4669795 ag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134359699 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2822206 2 - 2847728 ag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922731 2 + 2368649 at i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13147172 2 - 14256875 ag i saiBol1.JH378165 C 0 I 793 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=10793590.000000 s hg38.chr4_KI270789v1_alt 153232 1996 + 205944 ggcagggtacagtggctcacacctgtaatcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaagtacaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctac-ttgggaggctgaggcaggagaatggcttgaacccaggaggtggagcttgcagtgagctgagatcgcaccac----tgcactccagcctgg------g-----------tgacagagtgacactctgtctcaaaaac--aaaaaaaaaaagaatg----------------------------------------------------------------------gtacgtaagtagaataatgtaggtagcaccattttgaga-ttgcttttttttcattcagcataaagccctacaaatccacctaagctgttgcctgcattgatagtttgtttctttgttttgtgtcacagtttgtctatttattcacaggttgaaggatgtttgagtggtttcaagttgtgggctgctacacatgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccaggaggcctgga---ttgcattgcaaatatgtttttaactttgtaggaaacagccataccaccttccacaatggttatgctgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcgtgcttgtcagcacacagtattgtcagtatttttattttagccacttattaggtgtgcattgatgtctcattgtagctttaatttacatttccctaatggctaatgatggtgaacatctttttatgtgcttatttgctatctctataccttccttgatgaagtgtcaacaaatgttttgcctgttttcttgttgttgaggttgcagcattctttatatggtctggataaaag----ttcttaggtatgtgatttgtaaatatttcttccaggcaatagctaactttttatcctcctaac-aagccctacttagaactgaagtttgaaagtttgatgaagtccatattaccaa-tttttttctttc-------------ttagacatgacaactttttgtct---aactcttg-----cacaggaaga-tttttttcctgtgttttcttctagaaatgttgtagtttcacactttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccaacatcttttgttgcaaattctaatcttcctctatgggattgctttgcattttcattttaaaaaattaagttgactgcacctatgcaggtctatgtccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttccaggatctccctggccacagcttctcctttcctcgttttgatcatctagccagaaagctgggcttttagttactcagctctgctgtgcacatcctgcaactgcggctgctccaagcaggagatacagagaaaaagaagcC-AGTCTTTTCCTCACCACCTT---AGAAAGAGAGGT-CCCTGCCTTGAAGCTCACGCTCCCCGCACCTGCTGCCTTCACAGTCCTTACCCTGCAGAGCGCGGCTTGAGAGAGGAGAGGG------GCGAGCTTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTGGGGGCCAGAGCTAAAAGAGAGGCTGCTGTCTCcaagttgccttcaatccaagccggagaattctgcagacaaatagggcgctttcctccactttggtagtacttcaaaatcttgtcttcttcctcaatgcgtcaactaccacccagttttcagagccctccaacctctgttccctgcatttcttcctggCACTGGATCCCTAAGTACTCAGTTTAATCCATACATTGCCCTTATCAtttctttttttctttttctttttc-----ttttttttttt s panTro5.chr4 192940297 2002 + 194502333 ggcagggtgcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaagtacaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctac-ttgggaggctgaggcaggagaatggcttgaacctaggaggtggagcttgcagtgagctgagatcgcaccac----tgcactccagcctgg------g-----------tgacagagtgacactctgtctcaaaaacaaaaaaaaaaaaagaatg----------------------------------------------------------------------gtacataagtagaataatgtaggtggcaccattttgaga-ttgcttttttttcattcagcataaagccctacaaatccacctaagctgttgcctgcattgatagtttgtttctttgttttgtgtcacagtttgtctatttattcacaggttgaaggatgtttgagtggtttcaagttgtgggctgctacacatgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccaggaggcctgggtatttgcattgcaaatatgtttttaactttgtaggaaacagccataccaccttccacaatggttatgctgttttccatttccatcagcagtg-catgagaaagaaagcctgctgctctgcatgcttgtcagcacacggtattgtcagtatttttattttagccacttattaggtgtgcattgatgtctcattgtagctttaatttgcatttccctaatggctaatgatggtgaacatctttttatgtgcttatttgctatctctataccttccttgatgaggtgtcaacaaatgttttgcctgttttcttgttgttgaggttgcagcattctttatatggtctggataaaagttctttcttaggtatgtgatttgtaaatatttcttccaggcaatagctaactttttatcctcctaac-aagccctacttagaactgaagtttgaaagtttgatgaagtccatattaccaa-tttttttctttc-------------ttagacatgacaactttttgtct---aactcttg-----cacaggaag--tttttttcctgtgttttcttctagaaatgttgtagtttcacactttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccaacatcttttgttgcaaattctaatcttcctctatgggattgctttgcattttcattttaaaaaattaagttgactgcacctatgcaggtctatgtccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttccaggatctccccggccacagcttctcctttcctcgttttgatcatctagccagaaagctgggcttttagttactcagctctgctgtgcacatcctgcaactgcggctgctccaagcaggagatacagagaaaaagaagcC-AGTCTTTTCCTCACCACCTT---AGAAAGAGAGGT-CCCTGCCTTGAAGCTCAGGCTCCCCGCACCTGCTGCCTTCACAGTCCTCACCCTGCAGAGCGCGGCTTGAGAGAGGAGAGGG------GCAAGCTTGGGATAGTGGA--TGGCCTTCCCAGCTCTGAGCTTTGGGGGCCAGAGCTAAAAGAGAGGCTGCTGTCTCcaagttgccttcaatccaagccggagaattctgcagacaaatagggcgctttcctccactttggtagtacttcaaaatcttgtcttcttcctcaatgcgtcaactaccacccagttttcagagccctccaacctctgttccctgcatttcttcctggCACTGGATCCCTAAGTACTCAGTTTAATCCATACATTGCCCTTATCAtttctt------tttttctttttc-----ttttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192823956 1998 + 195804263 ggcagggtgcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaaagtacaaaaaattagccaggcatggtggtgggcgcctgtagtcccagctac-ttgggaggctgaggcaggagaatggcttgaacctaggaggtggagcttgcagtgagctgagatcgcaccac----tgcactccagcctgg------g-----------tgacagagtgacactctgtctcaaaaac---aaaaaaaaaagaatg----------------------------------------------------------------------gtacataagtagaataatgtaggtggcaccattttgaga-ttgcttttttttcattcagcataaagccctacaaatccacctaagctgttgcctgcattgatagtttgtttctttgttttgtgtcacagtttgtctatttattcacaggttgaaggatgtttgagtggtttcaagttgtgggctgctacacatgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccaggaggcctgggtatttgcattgcaaatatgtttttaactttgtaggaaacagccataccaccttccacaatggttatgctgttttccatttccatcagcagtg-catgagaaagaaagcctgctgctctgcatgcttgtcagcacacggtattgtcagtatttttattttagccacttattaggtgtgcattgatgtctcattgtagctttaatttgcatttccctaatggctaatgatggtgaacatctttttatgtgcttatttgctatctctataccttccttgatgaggtgtcaacaaatgttttgcctgttttcctgttgttgaggttgcagcattctttatatggtctggataaaagttctttcttaggtatgtgatttgtaaatatttcttccaggcaatagctaactttttatcctcctaac-aagccctacttagaactgaagtttgaaagtttgatgaagtccatattaccaa-tttttttctttc-------------ttagacatgacaactttttgtct---aactcttg-----cacaggaag--tttttttcctgtgttttcttctagaaatgttgtagtttcacactttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccaacatcttttgttgcaaattctaatcttcctctatgggattgctttgcattttcattttaaaaaattaagttgactgcacctatgcaggtctatgtccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttccaggatctccccggccacagcttctcctttcctcgttttgatcatctagccagaaagctgggcttttagttactcagctctgctgtgcacatcctgcaactgcggctgctccaagcaggagatacagagaaaaagaagcC-AGTCTTTTCCTCACCACCTT---AGAAAGAGAGGT-CCCTGCCTTGAAGCTCAGGCTCCCCGCACCTGCTGCCTTCACAGTCCTCACCCTGCAGAGCGCGGCTTGAGAGAGGAGAGGG------GCAAGCTTGGGATAGTGGA--TGGCCCTCCCAGCTCTGAGCTTTGGGGGCCAGAGCTAAAAGAGAGGCTGCTGTCTCcaagttgccttcaatccaagccggagaattctgcagacaaatagggcgctttcctccactttggtagtacttcaaaatcttgtcttcttcctcaatgcgtcaactaccacccagttttcagagccctccaacctctgttccctgcatttcttcctggCACTGGATCCCTAAGTACTCAGTTTAATCCATACATTGCCCTTATCAtttctt------tttttctttttc------tttttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3861201 1994 + 4876863 ggcagggtacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccg--tctactaaaaaaagtacaaaaaattagccaggcatggtggcgggcgcctgtagtcccagctac-tcgggaggctgaggcaggagaatggcttgaacccaggaggtggagcttgcagtgagc-gagatcgcaccac----tgcactccagcctgg------g-----------tgacagagtgacactctgtctcaaaaaa---aaaaaaaaaagaatg----------------------------------------------------------------------gtacataagtagaacaatgtaggtggcaccattttgaga-ttgcttttttttcattcagcataaagccctacaaatccacctaagctgttgcctgcattgatagtttgtttctttgttttgtatcacagtttgtctatttattcac-ggttgaaggatgtttgagtggtttcaagttgtgggctgctacacatgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccaggaggcctgga---ttgcattgcaaatatgtttttaactttgtaggaaacagccataccaccttccacaatggttatgctgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcatgcttgtcagcacacggtattgtcagta-ttttattttagccacttattaggtgtgcattgatgtctcattgtagctttaatttgcatttccctaatggctaatgatggtgaacatctttttatgtgcttgtttgctatctctataccttccttgatgaggtgtcaacaaatgttttgcctgttttcttgttgttgaggttgcagcattctttatatggtctggataaaagttctttcttaggtatgtgatttgtaaatatttcttccaggcaatagctaactttttatcctcctaac-aagccctacttagaactgaagtttgaaagtttgatgaagtccatattaccaa-tttttttctttc-------------ttagacgtgacaactttttgtct---aactcttg-----cacaggaaga-tttttttcctgtgttttcttctagaaatgttgtagtttcacactttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccaacatcttttgttgcaaattctaatcttcctctatgggattgctttgcattttcattttaaaaaattaagttgactgcacctatgcaggtctatgtccagttcctttatccagtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttccaggatctccccggccacagcttctcctttcctcattttgatcctctagccagaaagctgggcttttagttactcagctctgctctgcacatcctgcaactgcggctgctccaagcaggagatacagagaaaaagaagcC-AGTCTTTTCCTCACCACCTT---AGAAAGAGAGGTCCCCTGCCCTGAAGCTCAGGATCCCTGCACCTGCTGCCTTCACAGTCCTCACCCTGCAGAGCGCGGCTTGAGAGAGGGGCGGG------GCGAACTTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTGGGGGCCAGAGCTAAAAGAGAGGCTGCTGTCTCcaggttgccttcaatccaagccggagaattctgcagacaaatagggcgctttcctccactttggtagtacttcaaaatcttgtcttcttcctcaatgcgtcaactaccacccagttttcagagccctccaacctctgttccctgcatttcttcctggCACTGGATCCCTAAGCACTCAGTTTAATCCATACATTGCCCTTATCATTTCTttttttctttttctttttt------tttttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112751810 1991 + 115148730 ggccgggtgtggtggctcacgcctgcaatcccaacactttgggaggccgaggcgagcagatcatgaggtcagaagatcga-accatcctggccaacatggtgaaaccccatctctactaaaaaaa-tacaaaaaattagccaggcatggtggcgggtgcctgtagtcccagctactttgggaggctgaggcaggagaatggcgtgaatgcgggaggcagagcttgcagtgagccgagatcacgccac----tgcactccagcctgg------g-----------tgacagagtgagactctgtctcaaa------aaaaagcaaaaaatg----------------------------------------------------------------------gtatgtaagtagaataatgttggtggcaccattttgaga-t---ttttttttcattcagcataaagccctgcaaatccacctaagttgttgcctgcattgataatttgtttctttgttttgtatcacagtttgtctatttattcacaggttaaaggatttttgtgtggttt--------------ctacacatgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccaggaggcctgga---ttgcattgtaagtatgtttttaactgcgtaggaaacagccataccactttgcaaaatggttatgctcttttccatttccatcatcagtg-cgtg----aggaagcctgctgctctgcatgcttgtcagcacacggtactggcagtatttttattttagccacttcttaggtgtgcattgatgtctcattgtagctttaatttgcatttccctaatggctaatgatggtgaatatctttttatgtgcttatttgctatctctataccttccttgatgaggtgtcaacaaatgttttgcctgttttcttgttgttgaggttgcagcattctttatatggtgtggataaaagttctttcttagatacgtgatttgtaaatatttcttccaggcaatagccaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccatattatcaa-tttttttctttc-------------agcg-cat-ccggtgtcttgtctaagaacttttgtctaacacaggaaga-tttttttcctgtgttttcttctagaaatgttgcagttttacagtttacgtttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccaacatcttttgttgcaaattctaatcttcctctatgggattgctttgcattttcatttttaaaaattaagttgactgcacctgtgcaggtctatgtccagttcctttaacctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctcccttcccaggatctccccggccagagcttctcctttcctcattttgatcctcgagccagaaagctgggcttttagttactcagctctgctgtgcacatcctgcaactgtggctgctccgagcaggagatacagaggaaaagaagcC-AGTCTTTTCCTCACCACCTT---AGAAAGAGAGGTCCCCTGCCCTGGAGCTCAGGCTCCCTCCACCTGCTGCCTTCACAGTCCTCACCCTGCAGAGCGTGGCTTGAGAGAGGAAAGGG------GCGAACCTGGGATAGTACA--TGGCCCTCCCAACTCTGAGCTTTGGGGGCCAGAGCTAAAAGGGCGGCTCCTGTCttcatgatgccttcaatccaagccagagaattctggagacaaataggatgctctcctccacttccatagtacttcagaatcttgtcttcttccttaatgcatcaactaccacccggttttcagagccctccagcctctgttccctgcatttcttcctggAACTGGATCCCTAAGCACTCAGTTTAATCCATGCATTGCCCTTATCATTTCTTCTTTTCtttttctttctttctttttttttttttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189038368 2009 + 190429646 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcgggcggatcacaaggtcgggggatcgagaccatgctggctaacacagtgaaaccccgtctctactaaaaa---tacaaaaaattagccgggcgtggtggc-ggcgcctgtggtcccagctac-tcgaaaggcagaggcaggagaatggcgggaacccgggaggcagagcttgcagtgagctgagatccggccac----tgcactccagcctgg----gag-----------agagagagagagactctgtctctg-----------aaaaaaaaaaa----------------------------------------------------------------------gtacataagtagagtaatacaagcagcaccattctgaga--tttttttttttcattcagcataaagccctacaaatccacgtaagttgttgtctgcattgatagtttgt---tttgttttgtatcacaatttgtctgtttattcacatgttgaaggatgtttgagtggtttcaagttgtgggctgctacacgtgaagcagcaatgaacatctgtgttcacattcctgtgtgactgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtatgtttttaactttgtaggaaacagccataccactttctaaaatggttatgccgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcatgcttgtcagcacacggtactgtcagtatttttattttagccacttattaggtgtgcatttatgtcccattgtagctttaatttgcatttccctgatggctaatgatggtgaatatctttttctgtgcttatttgctatctctataccttccttgacgaggtgtcaacaaatgtttggcctgttttcttgttgttgaggttgcagaattctttatatggtctggataaaaattctttcttagatatgtgatttgtaaatatttcttccaagcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccatattaccaa-tttttttctttcagtgcatttggtgtcaagtctaaaaactttttgtct---aactctcg-----cacaggaaga-tttttttcctgagttttcttctaggaatgttgtagtttcacattttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtatgttttcttttttggcctacagtgtttaattttcccagcatcttttgttgcaaatactaatcttcctctatgggattgctttgcattttcgttttaaaaaattcagttgaatgcacctgtgcaggtctatttccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttctgggatctgcccagccagagcttctcctttcctcattttgatcctctagccagaaagctgggcttctagttactcagctctgctgtacacatcctgcaactgcggctgcTCTGAGAAGGAGATACAGAGAAGAGGAAGCC-AGGCTTTTCCTCACTACCTCAGCAGAAAGAAAGGTCCCCAGCCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGGCTTGAGAGAGGAGAGGGACGAATGCGAACTTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggcaaacaggatgctctcctccactttggtagtacttcaaaatcttgccttcttccttaatgcgtcaactaccacccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTGCCCTTATCATTTCTTTTTTTCTttttctttctt-----tcttttctttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187981241 2024 + 189454096 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcgggcggatcacaaggtcgggggatcgagaccatgctggctaacacagtgaaaccccgtctctactaaaaa---tacaaaaaattagccgggcgtggtggc-ggcgcctgtagtcccagctac-tcgaaaggcagaggcaggagaatggtgtgaatccgggaggcagagcttgcagtgagctgagatcgtgcccc----tgctctccagcctgg----gagagagagagagaagagagagagagactctgtctctg-------aaaaaaaaaaaaaaa----------------------------------------------------------------------gtacataagtagagtaatacaggcagcaccattctgaga--tttttttttttcattcagcataaagccctacaaatccacgtaagttgttgtctgcattgatagtttgt---tttgttttgtatcacaatttgtctgtttattcacatgttgaaggatgtttgagtggtttcaagttgtgggctgctacacgtgaagcagcaatgaacatctgtgttcacattcccgtgtgactgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtatgtttttaactttgtaggaaacagccataccactttctaaaatggttatgccgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcgtgcttgtcagcacacggtactgtcagtatttttattttagccacttattaggtgtgcatttatgtcccattgtagctttaatttgcatttccctgatggctaatgatggtgaatatctttttctgtgcttatttgctatctctataccttccttgacgaggtgtcaacaaatgtttggcctgttttcttgttgttgaggttgcagaattctttatatggtctggataaaaattctttcttagatatgtgatttgtaaatatttcttccaagcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccgtattaccaa-tttttttctttcagtgcatttggtgtcaagtctaaaaactttttgtct---aactctcg-----cacaggaaga-tttttttcctgagttttcttctaggaatgttgtagtttcacattttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtatgttttcttttttggcctacagtgtttaattttcccagcatcttttgttgcaaatactaatcttcctctatgggattgctttgcattttcgttttaaaaaattcagttgaatgcacctgtgcaggtctatttccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttctaggatctgcccagccagagcttctcctttcctcattttgatcctctagccagaaagctgggcttctagttactcagctctgctgtacacatcctgcaactgcggctgcTCTGAGAAGGAGATACAGAGAAGAGGAAGCC-AGGCTTTTCCTCACCACCTCAGCAGAAAGAAAGGTCCCCAGCCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGGCTTGAGAGAGGAGAGGGACGAATGCGAACTTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggcaaacaggatgctctcctccactttggtagtacttcaaaatcttgccttcttccttaatgcgtcaactaccacccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTGCCCTTATCAtttctttttttctttttctttctt-----tctttctttct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24372568 2016 - 25927173 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcgggcggatcacaaggtcgggggatcgagaccatgctggctaacacagtgaaaccccgtctctactaaaaa---tacaaaaaattagccgggcgtggtggcagacgcctgtagtcccagctac-tcgaaaggcagaggcaggagaatggtgtgaatccaggaggcagagcttgcagtgagctgagatcatgccac----tgcactccagcctgg----gag-----------agagagagagagactctgtctctg--------gaaaaaaaaaaaaa----------------------------------------------------------------------gtacataagtagagtaatacaggcagcaccattctgaga-ttttttttttttcattcagcataaagccctacaaatccacgtaagttgttgtctgcattgatagtttgt---tttgttttgtatcacaatttgtctgtttattcacatgttgaaggatgtttgagtggtttcaagttgtgggctgctacacgtgacgcagcaatgaacatctgtgttcacattcccatgtgactgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtatgtttttaactttgtaggaaacagccataccactttctaaaatggttatgccgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcatgcttgtcagcacacggtactgtcagtatttttattttagccacttattaggtgtgcatttatgtcccattgtagctttaatttgcatttccctgatggctaatgatggtgaatatctttttctgtgcttatttgctatctctataccttccttgatgaggtgtcaacaaatgtttggcctgttttcttgttgttgaggttgcagaattctttatatggtctggataaaaattctttcttagatatgtgatttgtaaatatttcttccaagcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccgtattaccaa-tttttttctttcagtgcatttggtgtcaagtctaaaaactttttgtct---aactctcg-----cacaggaaga-tttttttcctgagttttcttctaggaatgttgtagtttcacattttacattcagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtatgttttcttttttggcctacagtgtttaattttcccagcatcttttgttgcaaatactaatcttcctctatgggattgctttgcattttcgttttaaaaaattcagttgaatgcacctgtgcaggtctatttccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaggctcctccctttctaggatctgcccagccagagcttctcctttcctcattttgatcctctagccagaaagctgggcttctagttactcagctctgctgtacacatgctgcaactgtggctgcTCTGAGAAGGAGATACAGAGAAGAGGAAGCC-AGGCTTTTCCTCACCACCTCAGCAGAAAGAAAGGTCCCCAGTCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGACTTGAGAGAGGAGAGGGACGAATGCGAACTTGGGATGGTGGATGTGGCCCTCCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggcaaacaggatgctctcctccactttgttagtacttcaaaatcttgccttcttccttaatgcgtcaactaccacccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTGCCCTTATCAtttctttttttctttttctttctt-----tctttctttct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3402163 2013 + 4669795 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcgggcggatcacaaggtcgggggatcgagaccatgctggctaacacagtgaaaccccgtctctactaaaaa---tacaaaaaattagccgggcgtggtggcggacgcctgtagtcccagctac-tcggaaggcagaagcaggagaatggtgtgaatccgggaggcagagcttgcagtgagctgagatcacgccac----tgcactccagcctgg----gag-----------agagagagagagactctgtctctg--------aagaaaaaaaaaaa----------------------------------------------------------------------gtacataagtagagtaatacaggcagcaccattctgaga---tttttttttaaattcagcataaagccctacaaatccacataagttgttgtctgcattgatagtttgt---tttgttttgtatcacaatttgtctgtttattcacaggttgaaggatgtttgagtggttccaagttgtgggctgctacacgtgaagcagcaatgaacatctgtgttcacattcccgtgtgactgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtacgtttttaactttgtaggaaacagccataccactttctaaaatggttatgccgttttccatttccatcagcagtgccatg----agaaagcctgctgctctgcgtgcttgtcagcacacggtactgtcagtatttttattttagccacttattaggtgtgcatttatgtctcattgtagctttaatttgcatttccctgatggctaatgatggtgagtatctttttctgtgcttatttgctatctctataccttccttgacgaggtgtcaacaaatgtttggcctgttttcttgttgttgaggttgcagaattctttatatggtctggataaaaattctttcttggatatgtgatttgtaaatatttcttccaagcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccgtattaccaa-tttttttctttcagtgcatttggtgtcaagtctaaaaactttttgtct---aactctcg-----cacaggaaga-tttttttcctgagttttcttctaggaatgttgtagtttcacattttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtatgttttcttttttggcctacagtgtttaattttcccagcatcttttgttgcaaatactaatcttcctctatgggattgctttgcattttcgttttaaaaaattcagttgaatgcacctgtgcaggtctatttccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttctaggatctgcccagccagagcttctcctgtcctcattttgatcctctagccagaaagctgggcttctagttactcagctctgctgtacacatcctgcaactgcggctgcTCTGAGAAGGAGATACAGAGAAGAGGAAGCC-AGGCTTTTCCTCACCACCTCAGCAGAAAGAGAGGTCCCCAGCCCTGAAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGGCTTGAGAGAGGAGAGGGACGAATGCGAACTTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGTTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggcaaacaggatgctttcctccactttggtagtacttcaaaatcttgccttcttccttaatgcgtcaactaccacccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTGCCCTTATCAtttctttttttctttttctttctt-----tctttcttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134359701 2073 + 135778131 ggctgggcacagtggctcacgcctggaatcccagcactttgggaggctgaggcaggcagatcacaaggtcgggggatcgagaccatcctggctaacaca----------gtctctactaaaaa---tac-aaaaattagccaggcatggtggcgggcgcctgtagtcccagccac-tcagaaggcagaggcaggagaatggtgtgaacccgagaggcagagcttgcagtgagctgagatcacaccac----tgcactccagcctgggagagag-----------agagagagagagactctgtctcgga------aaaaaaaaaaaaaaaaaaaaNNNNNNNNNNGAGGCCACAGGGGGGACCATTCATCGGAGGaaaaaaccaaaaaaaaaaaaaaaaGGTACATAAGTAGAATAATAAAGGCAGCACCATTCTGAGATTTTTTTttttttcattcagcataaagccctacaaatccacctaagctgttgcctgcattgataatttgt---tttgttttgtatcatagtttgtctgtttattcacaggttgaaggatgtttgagtggtttcaagttgtgggctgctacaagtgaagcagcaatgaacatctgtgttcacattcctgtgtgattgtgtgtttcacttctgtagcataaatacccgggaggcctgga---tcgcactgtaagtatgtttttaaccttgtaggaaacagccataccactttccaaaatggttatgctgttttccatttccatcagcagtg-tgtg----agaaagcctgctgctctgtgtgcttgtcagcacacggtactgtcagtatttttattttagccacttattagttgtgcattgatgtcccattgtagctttaatttgcatttccctgatggctaatgatggtgaatatctttttgtgtgcttatttgctatctctataccttccttgatgaggtgtcaacagatgtttggcctgttttcttgttgttgaggttgcagaattctttatatggtctggataaaagttctttcttagatatgtgatttgtaaatatttcttccaagcaaaggctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccgtattaccagttttttttctttcagtgcatttggtgtcaagtctaagaactttttgtct---aactctcg-----cacaggaagattttttttcctgtgttttcttctaggaatgttgtagtttcagattttacatttagatctatgatctattttgatttaatttttataggaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtgtttaattttcccagcatctttcgttgcaaatactaatcttcctctatgggattactttgcattttcgttttaaaaaattcagttgactgcacctgtgcaggtctatttccagttccttta-cctgtgccatcaatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttctaggatctccccagccagagcttctcctttcctcattttgatcctctagccagaaagctgggcttctagttactcagctctgctgtacacatcctgcaactgcggctgcTCTGAGAAGAAGATACAGAGAAGA-GAAGCC-AGGCTTTTCCTCACCACCTTAGCAGAAAGAGAGTTCCGCAGGCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGGCTTGAGAGAGGAGAGGA------GCGAACGTGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggcaaacaggatgctctcctccactttggtagtatttcaaaatcttgtcttcttccttaatgcgtcaactaccgcccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTG-CCTTATCATTTCtttttttctttttctttctt-----tcttttttttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2822208 1990 - 2847728 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcaggcggatcacaaggtcaggggattgagaccatgctggctaacacagtgaaaccccgtctctactaaaaa---tacaaaaaattagccgggcgtggtggcggacgcctgtagtcccagctac-tcggaaggcagaggcaggagaatggtgtgaatccgggaggcagagcttgcagtgagctgagatcacgccac----tgcactccagcctgg----gag-----------agagagagagagactctgtctctga------aaaaaaaaaaaaaaa----------------------------------------------------------------------gtacataagtagagtaatacaggcagcaccattctgaga---ttttttttttcattcagcataaagccctacaaatccacataagttgttgtctgcattgatagtttgt---tttgttttgtatcacaatttgtctgtttattcacaggttgaaggatgtttgagtggtttcaagttgtgggctgctacacgtgaagcaggaatgaacatctgtgttcacattcccgtgtgactgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtatgtttttaactttgtaggaaacagccataccactttctaaaatggttatgccgttttccatttccatcagcagtg-catg----agaaagcctgctgctctgcgtgcttgtcagcacacggtactgtcagtatttttattttagccacttattaggtgtgcatttatgtcccactgtagcttcaatttgcatttccctgatggctaataatggtgaatatctttttctgtgcttatttgctatctgtataccttccttgacgaggtgtcaacaaatgtttggcctgttttcttgttgttgaggttgcagaattctttatatgctctgga--------------tagatatgtgatttgtaaatatttcttccaagcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttgatgaagtccgtattactaa-tttttttctttcagtgcatttggtgtcaagtctaaaaactttttgtct---aactctcg-----cacaggaaga-tttttttcctgagttttcttctaggaatgttgtagtttcacattttacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtatgttttcttttttggcctacagtgtttaattttcccagcatcttttgttgcaaatactaatcttcctctatgggattgctttgcattttcgttttaaaaaattcagttgaatgcacctgtgcaggtctatttccagttcctttatcctgtgccattgatccgttcctctgcccaagccacactgtgaggctgtcttcccaagctcctccctttctaggatctgcccagccagagcttctcctttcctcattttgatcctctagccagaaagccgggcttctagttactcagctctgctgtacacatcctgcaactgtggctgcTCTGAGAAGGAGATACAGAGAAGAGGAAGCC-AGGCTTTTCCTCACCACCTCAGCAGAAAGAGAGGTCGCCAGCCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTGTCCCCACCCTGCAGAACGTGGCTTGAGAGAGGAGAGGGACGAATGCGAACTTGGGATGGTGGA--TGGCCCTTCCAGCTCTGAGCTTTTGGGGCCAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagctggagaattctggaggcaaacaggatgctctcctccactttggtagtacttcaaaatcttgccttcttccttaatgcgtcaacgaccacccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTAAGCATTCAGTTTAATCCATACATTGCCCTTATCAtttctttttttctttttctttctt-----t---------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 922733 2010 + 2368649 ggccgggcacagtggctcacgcctggaatcccagcactttgggaggccaaggcgggcagatcacaaggttgggggatcgagaccatcctagctaacacagtgaaacaccgtctctact------------aaaaattaaccgggtgtggtggcaggtgcctgtagtcccagctac-tcaggagactgaggcaggagaatggtgtgagcccgggaggcagagcttacagtgagctgagatcatgccactgcatgcactccagcctgg----gag-----------agagagagagagactctgtctcaaa------aaaaaaaaaaaaaaa------------------------------------------------------------aaaaaaaaatgtacataagtagaataatataggcagcaccattctgaga---ttatttttttcattcagcataaagccctacaaatccacctaagttgttgcctgcattgataatttgt---tttgttttgtatcacaatttgtctatttattcacaggttgaaggatgtttgagtggtt-caagttgtgggctgctacacgtgaagcaacaatgaacatctgtgttcacattcctgtgtggttgtgtgtttcacttctgtagcataaatacccgggaggcctgga---ttgcactgtaagtatg-ttttaactttgtaggaaacagctataccactttccaaaatggttatgccgttttccatttccttcagcagtg-cgtg----agaaagcctgctgctctgcatgcttgtcagcacacggtactgtcagtatttttattttagccacttattagatgtgcattgatgtcccattatagctttaatttgtatttccctgatggctgatgatggtgaatatctttttgtgtgcttgtttgctatctctataccttccttgatgaggtgtcaacaaatgttttgcgtgttttcttgctgttgaggttgcagaattctttatatagtctggataaaagttctttcttagatatgtgatttgtaaatatttcttccaggcaatagctaactttttatcctcctaacaaagccctacttagaactgaagtttgaaagtttggtgaagtccgtattaccaa-tttttttctttcagcgcatttggtgtcaagtctaaaaactttttgtct---aactcttt-----caccggaagattttttttcctgtgttttcttctaggaatgttgtagtttcacatttcacatttagatctatgatctattttgagttaatttttatagaaagtgtgaagtttaggtctagctttttgtttgtgtgttttcttttttggcctacagtatttaattttcccagcatcttttgttgcaaatactaatcttcctctatgagactgctttgcattttcattttaaaaaattcagttgactgcacctgtgcaggtctatttccagttcctttatcctgtgccgtcgatccatTCCTCTGGCCCAGCCACACTGtgaggctgtcttcccaagctcctccctttctaggatctccccaaccagagcttctcctttcctcattttgatcctctagccagaaaactgggcttctagttactcagctctgctgt--acatcctgcaactgcggctgcTCTGAGAAGGAGATACAGAGAAGCAGCAGCCAAGGCTTTTCCTCACCACCTCAGCAGAAAGAGAGGTCCCCAGGCCTGGAGCTCAGGCTCCCTCCACCTGCTGCGTTCACTCTCCCCATGCTGCAGAGTGTGGCTTGAGAGAAGAGAGGG------GCGAACTGGGGATGGTGGA--TGGCCCTCCCAGCTCTGAGCTTTTGGGGCTAGAGCTAGAAGGGCGGCTCCTGTCTCcaagttgccttcaatccaagccggagaattctggaggc-aacaggatgctctcctccactttggtagtacttcaaaatcttgtcttcttccttaatgcgtcaactaccgcccagttttcagagccctccagtctctgttccctgcatttcttcctggAACTGGATCCCTATGCATTCAGTTTAATCCGTACATTGCCCTTATTAtttctttctttctttctctctctc-----tttctttcttt i colAng1.NW_012116221v1 C 0 I 1250 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=4095.000000 s hg38.chr4_KI270789v1_alt 155228 1 + 205944 t s panTro5.chr4 192942299 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192825954 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863195 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112753801 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040377 1 + 190429646 t i rheMac8.chr5 C 0 I 7 s macFas5.chr5 187983265 1 + 189454096 t i macFas5.chr5 C 0 I 6 s macNem1.NW_012013133v1 24374584 1 - 25927173 t i macNem1.NW_012013133v1 C 0 I 13 s cerAty1.NW_012001672v1 3404176 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 I 10 s chlSab2.chr7 134361774 1 + 135778131 t i chlSab2.chr7 C 0 I 158 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824198 0 - 2847728 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=605057.000000 s hg38.chr4_KI270789v1_alt 155229 169 + 205944 gagacagagtttcactctgtctcccaagctggagtgcaatggtgcagtcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgcctcagcctcccgagtaactgcgattacaggcacctgccacca-tgcccagctaac-----tttttttttttttttgta-g s panTro5.chr4 192942300 168 + 194502333 gagacagagttttgctctgtctcccaagctggagtgcaatggcgcaatcctggctcactgcaacctcagcctcccgagttcaagaggttctcctgcctcagcctcccgagtaactgggattacaggcacctgccacca-tgcccagctaac------ttttttttttttttgta-g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192825955 166 + 195804263 gagacagagttttgctttgtctcccaagctggagtgcaatggcgcaatcctggctcactgcaacctcagcctcccgagttcaagaggttctcctgcctcagcctcccgagtaactgggattacaggcacctgccaccattgcccagctaac---------tttttttttttgta-g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863196 174 + 4876863 gagacagagtttccctgtgtctcccaagctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgcctcagcctcccgagtaactgggattataggcacctgccacca-tgcccagctaacttttttttttttttttttttgta-g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112753802 168 + 115148730 gagacagagtttctctctgtctcccaagctggagtgcaatggcacgatcttggctcactgcaacctcagcctcccaagttcaagaggttctcctgcctcagcctcccgagtaactgggattacaggcacctgccacca-tgcccagctaac------ttttttttttttgtgta-t i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040385 168 + 190429646 gagacagagtttcactctgtctcccaagctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgtctcagcctcccgagtaactgggattacaggcacctgccacca-cgcccagctaac-----tttttttttttttttttt-- i rheMac8.chr5 I 7 C 0 s macFas5.chr5 187983272 167 + 189454096 -agacagagtttcactctgtctcccaagctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgtctcagcctcccgagtaactgggattacaggcacctgccacca-cgcccagctaac-----tttttttttttttttttt-- i macFas5.chr5 I 6 C 0 s macNem1.NW_012013133v1 24374598 167 - 25927173 gagacagagtttcactctgtctcccaagctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgtctcagcctcccgagtaactgggattacaggcacctgccacca-cgcccagctaac------ttttttttttttttttt-- i macNem1.NW_012013133v1 I 13 C 0 s cerAty1.NW_012001672v1 3404187 169 + 4669795 gagacagagtttcactctgtctcccaagctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgtctcagcctcccgagtaactgggattacaggcatctgccacca-cacccagctaac-----ttttttttttttttagtag- i cerAty1.NW_012001672v1 I 10 I 15 s manLeu1.NW_012102221v1 2824198 139 - 2847728 ----------------------------ctggagtgcaatggcgcaatcttggctcactgcaacctcagcctcccgagttcaagaggttctcctgtctcagcctcccgagtaactgggattacaggcacctgccacca-cgcccagctaac-----ttttttttttttttttt--- i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=73586.000000 s hg38.chr4_KI270789v1_alt 155398 24 + 205944 ttttagtagagatggggtttcgcc s panTro5.chr4 192942468 24 + 194502333 ttttagtagagatggggttttgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826121 24 + 195804263 ttttagtagagatggggttttgcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863370 24 + 4876863 ttttagtagagacggggtttcgcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112753970 24 + 115148730 ttttagtagagatggggtttcgcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040553 24 + 190429646 ttttagtagagacagggttttgcc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983439 24 + 189454096 ttttagtagagacagggttttgcc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24374765 24 - 25927173 ttttagtagagacagggttttgcc i macNem1.NW_012013133v1 C 0 C 0 s manLeu1.NW_012102221v1 2824337 24 - 2847728 ttttagtagagaccgggttttgcc i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e otoGar3.GL873580 11266135 9889 - 11315646 I a score=99996.000000 s hg38.chr4_KI270789v1_alt 155422 108 + 205944 acgttggccaggctggtctcgaactcctgaccttaggtgatccatctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccCGCCCTTG s panTro5.chr4 192942492 108 + 194502333 acgttggccaggctggtctcgaactcctgaccttaggtgatccatctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccCGCCCTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826145 108 + 195804263 acgttggccaggctggtctcgaactcctgaccttaggtgatccatctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccCGCCCTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863394 108 + 4876863 acgttggccaggctggtctcgaactcctgcccttaggtgatccatccgcctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccCGCCCTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112753994 108 + 115148730 acgttggccaggctggtctcgaactcctgacctcagttgatccatctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccAATCCACCCTTG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e otoGar3.GL873580 11266135 9889 - 11315646 I a score=1500.000000 s hg38.chr4_KI270789v1_alt 155530 1 + 205944 C s panTro5.chr4 192942600 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826253 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863502 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754102 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11276024 1 - 11315646 C i otoGar3.GL873580 I 9889 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86640710 1713 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=76154.000000 s hg38.chr4_KI270789v1_alt 155531 61 + 205944 CATTTCTATCATCTGCCTTTCACACTGGATCTT-----TTTTCAGTTGTTCCAATAAACCAAGTGG s panTro5.chr4 192942601 61 + 194502333 GATTTCTATCATCTGCCTTTCACACTGGATCTT-----TTTTCAGTTGTTCCAATAAACCAAGTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826254 61 + 195804263 GATTTCTATCATCTGCCTTTCACACTGGATCTT-----TTTTCAGTTGTTCCAATAAACCAAGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863503 61 + 4876863 CATTTCTATCATCTGCCTTTCACACTGGATCTT-----TTTTCAGTTGTTCCAATAAACCAAGTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754103 61 + 115148730 CATTTCTATCATCTGCCTTTCACACTGGATCTT-----TTTTCAGTCGTTCCAATAAACCAAGCGG i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11276025 66 - 11315646 CATTTCTGTTGTCTACCTTTCACAGTTGATTTTTTTTCTTTTCAGTCTTTGTACTAATTCAAGCAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86642423 59 - 129401213 CATAACTTTCTTCTCCATTTCACAGTTGATG-------TGTTGAGTTTTTTCAACATTTCAAGCAG i mm10.chr8 I 1713 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17529113 2039 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=144081.000000 s hg38.chr4_KI270789v1_alt 155592 88 + 205944 TAAAAATTTGAAAAGTGAATGTGAGTAATAGGACCAAATTTAAAAAGTTATAGAATTTTAGGGTTGGAGAGGAACGTGAAAGAGTTAT s panTro5.chr4 192942662 88 + 194502333 TAAAAATTTGAAAAGTGAATGTGAGTAATAGGACCAAATTTTAAAAGTTATAGAATTTTAGGGTTGGAGAGGAACGTGAAAGAGTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826315 88 + 195804263 TAAAAATTTGAAAAGTGAATGTGAGTAATAGGACCAAATTTTAAAAGTTATAGAATTTTAGGGTTGGAGAGGAACGTGAAAGAGTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863564 88 + 4876863 TAAAAATTTGAAAAGTGAATGTGAGTAATAGGACCAAATTTAAAAAGTTATAGAATTTTAGGGTTGGAGAGGAACGTGAAAGAGTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754164 88 + 115148730 TAATAATTTGAAAAGCGAATGTGAGTAATAGGGCCAAATTTAAAAAGTTATAGAATTTTAGAGTTGGAGAGGAACGTGAAAGAGTTAT i nomLeu3.chr7b C 0 C 0 s micMur3.chr14 17531152 88 - 93316391 TAAAAATTTAAAAAGTGAATGTGAGTAATGTGACTTAATTAAAaaaatcacagatttttagggctggagaggaactaaaaagagttat i micMur3.chr14 I 2039 C 0 s otoGar3.GL873580 11276091 83 - 11315646 TAAAAATTTAAAAAGTGAAT----GTAATGGGACTTAATT-AAAAAATCATAGACTTTTAGAGCTGTATGGGAACTGAAAAGAGTTAT i otoGar3.GL873580 C 0 I 199 s mm10.chr8 86642482 73 - 129401213 TAGAATTTCAACAAGTGAATATGAATTATGAGATTTAATT-GCACAGTTATAGGGTTTTGGAATTTCAGC--------------TTTT i mm10.chr8 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=558106.000000 s hg38.chr4_KI270789v1_alt 155680 378 + 205944 AATCACCCTTTCAAGCCACCAAGCTGAGATGAAATGCCTTGCCCTAAGTCACTCTTAGCCCTCTGATCTTCCTACGATGTCATGCGACTTTCACATAGAAACTAAAAGGACTTACCATTAATTTCTCCTCTTTCAT--------TTACACATATGAATTTT-TTT----------AAAAGTCTTTCTCATATCTTGACTGAGTTATACTCACAAAACCTACCCATTTTTCTGCTGAATTTATTCTTGAACTTGAATACAGTCTCATGTGGAAACAGTAA------TAATACCAAAATTGCAAATAATCTTTATAT-CTGACATTGCTCTTAGTTAATTCTGTTGCTAGTTTGGAAAG---TTTTTTTTTTTTTAAAAGAATGTTTAAACATCATTACGTTTAAAACA s panTro5.chr4 192942750 381 + 194502333 AATCACCCTTTCAAGCCACCAAGCTGAGATGAAATGCCTTGCCGTAAGTCACTCTTAGCCCTCTGATCTTCCTACGATGTCATGCAACTTTCACATAGAAACTAAAAGGACTTACCATTAATTTCTCCTCTTTCAT--------TTACACATATGAATTTT-TTT----------AAAAGTCTTTCTCATATCTTGACTGAGTTATACTCACAAAACCTACCCATTTTTCTGCTGAATTTATTCTTGAACTTGAATACAGTCTCATGTGGAAACAGTAA------TAATACCAAAATTGCAAATAATCTTTATAT-CTGACATTGCTCTTAGTTAATTCTGTTGCTAGTTTGGAAAGTTTTTTTTTTTTTTTTAAAAGAATGTTTAAACATCATTACGTTTAAAACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826403 381 + 195804263 AATCACCCTTTCAAGCCACCAAGCTGAGATGAAATGCCTTGCCGTAAGTCACTCTTAGCCCTCTGATCTTCCTACGATGTCATGCAACTTTCACATAGAAACTAAAAGGACTTACCATTAATTTCTCCTCTTTCAT--------TTACACATATGAATTTT-TTT----------AAAAGTCTTTCTCATATCTTGACTGAGTTATACTCACAAAACCTACCCATTTTTCTGCTGAATTTATTCTTGAACTTGAATACAGTCTTATGTGGAAACAGTAA------TAATACCAAAATTGCAAATAATCTTTATAT-CTGACATTGCTCTTAGTTAATTCTGTTGCTAGTTTGGAAAGtttttttttttttttttAAAGAATGTTTAAACATCATTACGTTTAAAACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3863652 379 + 4876863 AATCACCCTTTCAAGCCACCAAGCTGAGATGAAATGCCTTGCCCTAAGTCTCTCTTAGCCCTCTGATCTTCCTACGGTGTCATGCGCCTTTCATATAGAAACTAAAAGGACTTACCATTAATTTCTCCTCTTTCAT--------TTACACATATTAATTTT-TTT----------AAAAACCTTTCTCATATCTTGACTGAGTTATACTCACAAAACCTACCCATTTTTCTGCTGAATTTATTCTTGAACTTGAATACAGTCTCATGTGGAAACAATAA------TAATACCAAAATTGCAAATAATCTTTATAT-CTGACATTGCTCTTAGTTAATTCTGTTGCTAGTTTGGAAAG--TTTTTTTTTTTTTTAAAAGAATGTTTAAACATCATTACGTTTAAAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754252 376 + 115148730 AATCACCCTCTCAAGCCACCAAGCTGAGATGAAATGCCTTGCTCTAAGTCACTCTTAGCCCTCTGATCTTCCTACGGTGTCAAGCGCCTTTCACATAGAAATTAAAAAGACTTACCCTTAATTTCTCCTCTTTCAT--------TTACACATATTAAATTT-TTT----------TTAAGCCTTTCACATATCTTGACTGAGTTATACTCACAAAACCTACCTATTTTTCTGCTGAATTTATTCTTGAACTTGAATACAGTCTCATGTGGAAAC---AA------TAATATGAAAATTGCAAATAATCTTTATAT-CTGACATTGCTCTCGGTTAATTCTGTTGCTAGTTTGGAAAG--AGTTTTTTTTTTTTTAAAGAATGTTTAAACATTATTACATTTAAAACA i nomLeu3.chr7b C 0 C 0 s micMur3.chr14 17531240 389 - 93316391 aatcaaccctttcagccaccaaagtgagattaaatgacttgccccaagtcacTCTTAGCCCTGTGATCTTCCCACTGGGTCATGCACTTTTCAGATAGAAGCTAGAA-GACATACCATTCCTGCCTCCTCTTTCACTACACCTATTATACATTTTTTTTTTCTTTTTTGGAAAACAAAAGGCTTTCACGAATCTTGACTGAGCTATACTCACAAAACCTA-CTATTTT--TGCTGAATTTATTCTTGAATGTGGATGGAGTTTCATATGGAAATATTAA------TAATATCAAAATTACAAATAATCTCCATACTCTGACATTGCATTTAGTTAATTCTGTTGCTGGTTTGAACAG--------ACTTTTTGAAAATAATGTTTAAACATTATTATATTTAACATA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11276373 375 - 11315646 AATCAAACCTTTCATCCACCAAGCTGATATTAAATGACTTGCCCCAAGTCATTCTTGGCCCTGTGATC--------------------TTTCAGGTAGAAGCTGGAA-GACATACCAGTCATGTGGCCTTTTTAATGACACCTATTAAACATTTCCTTTTT-TTTTTTAGAAAACAAAAGACTTTCACAAATCTAGATTGAGTTATATTCATAAAATCTAGCTATTTT--TTCTGAATTTATTCCTGAATGTAGATACAGTTTTACACGGAAACATTAATATAAGTAATATCAAAGTTGCAAGTCATCTGCATATGCTGACATTGCTTTTAGGTAACTGTGTTGCTGATTTGAACAG--------AGTTTGGGGAAAGAATGTTTAAGCATTATTATATTTAAAACA i otoGar3.GL873580 I 199 I 156 s mm10.chr8 86642555 361 - 129401213 ----GCCTCTCTCCATGTCTATGACCAGAATGAATGA-TTAACCAAAGTGTTCCTGAGCTCTACAGTCTTTGTATTGTGCTGTGTACATTT-AGATAGACACCAGAC-ACCATAGCTTAAATTCACCCAATTTA----------CTATAATTCTAAACATT-TTTG---------GTGTGGCTTTCATATATCTTAACTCAGTTTCACTCATAAATCCTGCCTATTT---TCCTCAAGCTCCTTTTGAACATAGAAAT-GTTTCAATGGGAAATATTGA------TAGTATAAAACCTGTAAATGTTCCTAGTACTCTGACTTT--TTGTAGTTAATTCTGTTGCAGGTTTTGGAAG-------AGCTTTTATAAAGGAATGTTTAAACATTTTTATATTTAAATCC i mm10.chr8 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=132222.000000 s hg38.chr4_KI270789v1_alt 156058 118 + 205944 TTTTAAAGCCTGAGTAC------------------------GAG---------------------------TTTTAAATCA-------------------------------------------------------------------------------------------------------GAATCACTGACTTCCCTCCCTTACACCTCATTATTACAAACCTTGATTTGAAAGCCGTATTTCCTACAAAGAGTCAAACGAGAAAAAA--- s panTro5.chr4 192943131 118 + 194502333 TTTTAAAGCCTGAGTAC------------------------GAG---------------------------TTTTAAATCA-------------------------------------------------------------------------------------------------------GAATCACTGACTTCCCTCCCTTACACCTCATTATTACAAACCTCGATTTGAAAGCTGTATTTCCTACAAAGAGTCAAACGAGAAAAAA--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826784 118 + 195804263 TTTTAAAGCCTGAGTAC------------------------GAG---------------------------TTTTAAATCA-------------------------------------------------------------------------------------------------------GAATCACTGACTTCCCTCCCTTACACCTCATTATTACAAACCTTGATTTGAAAGCTGTATTTCCTACAAAGAGTCAAACGAGAAAAAA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864031 118 + 4876863 TTTTAAAGCCTGAGTAT------------------------GAG---------------------------TTTTAAATCA-------------------------------------------------------------------------------------------------------GAATCACTGACTTCCCTCCCGTACACCTCATGATTACAAACCTTGATTTGAAAGCCGTATTTCCTACAAAGAGTCAAACGAGAAAAAA--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754628 118 + 115148730 TTTTAAAGCCTGAGTAC------------------------AAG---------------------------TTTTAAATTG-------------------------------------------------------------------------------------------------------GAATCACTGAATTCCCTCCCTTACACCTCATGATTATAAACCTTGATTTGAAAGCAGTATTTCCTACAAAGAGTCAAATGAGAAAAAA--- i nomLeu3.chr7b C 0 C 0 s micMur3.chr14 17531629 113 - 93316391 TTTTGAAGTCTGGGTGAA-----------------------GTG---------------------------TTTTAAATTA-------------------------------------------------------------------------------------------------------GAATCACAGACTCCCTTCACATATACCTCA------TAAGACTTGATCTGAAAGTAGTATTTCCTACAAAGAGTCAAACCAGAAAAAA--- i micMur3.chr14 C 0 I 6428 s otoGar3.GL873580 11276904 269 - 11315646 TTTTAAGAGCTGGGTAAACCACTGGTTCACTTTCTTTGTAGGTGACATTCAGTATAGCTGAAAAGAGATATTCTTAGATTAATGGTAAATAATGATGAGTCAGCAAAATAATGTGACAATTCCTGGGGAATTCAGGGATGGGGTGAAATTGGACTGGGTCATCCTGGTCCATAGGGCTAAATGTGAACCACAGACTCCCCTTGCTTACACCTGA---GTGTAAGGCTTAGTCTGAAAGCAGTATTTCCTACGAAGAGTCTAACTAGAAGAGA--- i otoGar3.GL873580 I 156 C 0 s mm10.chr8 86642916 79 - 129401213 TTTT-------------------------------------GAA---------------------------TTTTGAATGA-------------------------------------------------------------------------------------------------------AAAACAT--------------------------TTACAAGACT-GATGTGAAAACAGTATTTACTCT--AGAGTCAAAGAAGAGACAAAAG i mm10.chr8 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=32150.000000 s hg38.chr4_KI270789v1_alt 156176 39 + 205944 CATACTCCTGTGTGAAAAGAA--ATATACCAATGTACCAAA s panTro5.chr4 192943249 39 + 194502333 CATACTCCTGTGTGAAAAGAA--ATATACCAATGTACCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192826902 39 + 195804263 CATACTCCTGTGTGAAAAGAA--ATATACCAATGTACCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864149 39 + 4876863 CATACTCCTGTGTGAAAAGAA--ATATACCAATGTACCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754746 41 + 115148730 CATACTCCTGTGTGAAAAGAAATATATATCAATGTACCAAA i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277173 17 - 11315646 --------------------A--GGATTTCTCTGTAC--AA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86642995 37 - 129401213 --TGTACTAATAGTGAAGGGA--ACAAAATAATACACCAAA i mm10.chr8 C 0 I 767 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=113372.000000 s hg38.chr4_KI270789v1_alt 156215 114 + 205944 TCCTTATAGTTTCTCTTCCCCAACCTGTGACCAATGTTCACCCTTTGGTGCCAGACTCATCTGTTTTacaca------------------cacacacacacacCCCGAAAACTTGATGTAA-AATGTAAATAA s panTro5.chr4 192943288 130 + 194502333 TCCTTATAGTTTCTCTTCCCCAACCTGTGACCAATGTTCACCCTTTGGTGCCAGACTCATCTGTTTTacaca--cacacacacacacatgcacacacacacacCCCAAAAACTTGATGTAA-AATGTAAATAA i panTro5.chr4 C 0 I 55 s panPan2.chr4 192826941 132 + 195804263 TCCTTATAGTTTCTCTTCCCCAACCTGTGACCAATGTTCACCCTTTGGTGCCAGACTCATCTGTTTTacacacacacacacacacacatgcacacacacacacCCCAAAAACTTGATGTAA-AATGTAAATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864188 130 + 4876863 TCCTTATAGTTTCTCTTCCCCAACCTGTGACCAATGTTCACCCTTTGGTGCCAGACTTATCTGTTTTacaca--cacacacacacacacgcacacacacacacCCTGAAAACTTGATGTAA-AATCTAAATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754787 120 + 115148730 TTCTTATAGTTTCTCTTCCCCAACCTATGACCAATGTTCACCCTTTGGTGCCAGACTCATCTGTTTTacaca--cacaca----------cacacacacacacCCTGAAAACTTGATATAA-AATATAAATAA i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277190 108 - 11315646 GGCCTGAATTTTCTCTTCCTCCATCTATGATGAATTTTTATCCTTTGGCTCCAGAACCATCCATT-------------------------GAGACATACTGACATGAGGAACTTTGTGTAGTTATATGAATAA i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=910.000000 s hg38.chr4_KI270789v1_alt 156329 1 + 205944 T s panPan2.chr4 192827073 1 + 195804263 T i panPan2.chr4 C 0 I 56 s gorGor5.CYUI01015356v1 3864318 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754907 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277298 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e panTro5.chr4 192943418 55 + 194502333 I a score=2289.000000 s hg38.chr4_KI270789v1_alt 156330 6 + 205944 TCATAT s gorGor5.CYUI01015356v1 3864319 6 + 4876863 TCATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754908 6 + 115148730 TCATAT i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277299 6 - 11315646 TGATGT i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e panPan2.chr4 192827074 56 + 195804263 I e panTro5.chr4 192943418 55 + 194502333 I a score=1820.000000 s hg38.chr4_KI270789v1_alt 156336 2 + 205944 TA s panTro5.chr4 192943473 2 + 194502333 TA i panTro5.chr4 I 55 C 0 s gorGor5.CYUI01015356v1 3864325 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754914 2 + 115148730 TA i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277305 2 - 11315646 TA i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e panPan2.chr4 192827074 56 + 195804263 I a score=34643.000000 s hg38.chr4_KI270789v1_alt 156338 32 + 205944 GACATAATAATAAGGAAAGGAAAGCAAATAGC s panTro5.chr4 192943475 32 + 194502333 GACATAATAATAAGGAAAGGAAAGCAAATAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827130 32 + 195804263 GACATAATAATAAGGAAAGGAAAGCAAATAGC i panPan2.chr4 I 56 C 0 s gorGor5.CYUI01015356v1 3864327 32 + 4876863 GACATAATAATAAGGAAAGGAAAGCAAATAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754916 32 + 115148730 GACATAATAATAAGAAAAGGAAAGTAAATAGC i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11277307 27 - 11315646 -----GGCACTGTGACAAGGAAAGCAAATAGC i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e cebCap1.NW_016107886v1 1038620 810 - 2196201 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e saiBol1.JH378165 13147174 793 - 14256875 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=31538.000000 s hg38.chr4_KI270789v1_alt 156370 13 + 205944 AAATGTGCCTTTG s panTro5.chr4 192943507 13 + 194502333 AAATGTGCCTTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827162 13 + 195804263 AAATGTGCCTTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864359 13 + 4876863 AAATGTGCCTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754948 13 + 115148730 AAATGTGCCTTTG i nomLeu3.chr7b C 0 C 0 s saiBol1.JH378165 13147967 13 - 14256875 aaatGTGCCTTTA i saiBol1.JH378165 I 793 C 0 s cebCap1.NW_016107886v1 1039430 13 - 2196201 aaatGTGCCTTTA i cebCap1.NW_016107886v1 I 810 C 0 s otoGar3.GL873580 11277334 13 - 11315646 AAATGTGCCTTCA i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e micMur3.chr14 17531742 6428 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=125511.000000 s hg38.chr4_KI270789v1_alt 156383 48 + 205944 TTGTTAGGAGTGAAGATGCATGTTCAAAATTGTCTGTGCTGAGTAAGG s panTro5.chr4 192943520 48 + 194502333 TTGTTAGGAGTGAAGATGCAGGTTCAAAATTGTCTGTGCTGAGTAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827175 48 + 195804263 TTGTTAGGAGTGAAGATGTAGGTTCAAAATTGTCTGTGCTGAGTAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864372 48 + 4876863 TTGTTAAGAGTGAAGATGCATGTTCAAAATTGTCTGTGCTGAGTAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112754961 48 + 115148730 TTGTTAAGAGTGAGGATGCATGTTCAAAATTGTCTGTGCTGAGTAAGG i nomLeu3.chr7b C 0 C 0 s saiBol1.JH378165 13147980 48 - 14256875 TTATTCAGAGTGAGGATGCATATTCAAAATTTTCTGTGCTGAGTAAGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1039443 48 - 2196201 TTATTCAGAGGGAGGATGCATGTTCAAAATTTTCTGTGCTGAGTAAGG i cebCap1.NW_016107886v1 C 0 C 0 s micMur3.chr14 17538170 42 - 93316391 TTGTTGGGAGTGAAGATGCATATTCAAAATTGTCTGTGCTGA------ i micMur3.chr14 I 6428 C 0 s otoGar3.GL873580 11277347 48 - 11315646 TTTTTAGTGGTGAAGATGCAAGTTCAAAATCATCTGTGCTGAATAAGG i otoGar3.GL873580 C 0 I 280 e calJac3.chr3 189655238 1410 - 190850796 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=6552.000000 s hg38.chr4_KI270789v1_alt 156431 2 + 205944 AT s panTro5.chr4 192943568 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827223 2 + 195804263 AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864420 2 + 4876863 AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755009 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s saiBol1.JH378165 13148028 2 - 14256875 AT i saiBol1.JH378165 C 0 I 313 s cebCap1.NW_016107886v1 1039491 2 - 2196201 AT i cebCap1.NW_016107886v1 C 0 I 353 s micMur3.chr14 17538212 2 - 93316391 AT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11277675 2 - 11315646 AT i otoGar3.GL873580 I 280 C 0 e calJac3.chr3 189655238 1410 - 190850796 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e aotNan1.NW_018492112v1 3426036 1417 - 5030052 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=244106.000000 s hg38.chr4_KI270789v1_alt 156433 58 + 205944 AAGGTCTTAATATCTGAGAAAAGGGGTCTGAATCCTGAGGAGGATATACAGAAAGTGG s panTro5.chr4 192943570 58 + 194502333 AAGGTCTTAATATCTGAGAAAAGGGGTCTGAATCCTGAGGAGGATATACAGAAAGTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827225 58 + 195804263 AAGGTCTTAATATCTGAGAAAAGGGGTCTGAATCCTGAGGAGGATATACAGAAAGTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864422 58 + 4876863 AAGGTCTTAATATCTGAGAAAAGGGGTCTGAATTCTGAGGAGGATATACAGAAAGTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755011 58 + 115148730 AAGGTCTTAATATCTGAGAAAAGGGGTCTGAATCCTGAGGAGGATATACAGAAAGTGG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189656648 58 - 190850796 AAGGTCTTAATATCTAAGAAAAGGGGACTGAACCCTGAGGAGGATCTAAATAAAGTGG i calJac3.chr3 I 1410 C 0 s saiBol1.JH378165 13148343 58 - 14256875 AAGTTCTTAATATCTAAGAAAAGGGGACTGAATCCTGAGGAGGATATAAATAAAGTGT i saiBol1.JH378165 I 313 C 0 s cebCap1.NW_016107886v1 1039846 58 - 2196201 AAGGTCTTAATATCTAAGAAAAGGGGACTGAATCCTGAGGAGGATATAAAGAAAGTGG i cebCap1.NW_016107886v1 I 353 C 0 s aotNan1.NW_018492112v1 3427453 58 - 5030052 AAGGTCTTAATATCTAAGAAAAGGGGTCTGAATCCTGAGGAGGATATAAATAAAGTGG i aotNan1.NW_018492112v1 I 1417 C 0 s micMur3.chr14 17538214 58 - 93316391 AAGGTCTTAATATCCAAGAAAAAGTACCTGAATCCTTAGGAGGATGTAAATAAAGTGG i micMur3.chr14 C 0 I 155 s otoGar3.GL873580 11277677 58 - 11315646 AAGGTCTTAGTATCTAAGAAAAGATACCTGGATCCGGAGGATAATATAAATAAATTTG i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=266623.000000 s hg38.chr4_KI270789v1_alt 156491 94 + 205944 CCTTTTGAATTAGACTATTTGGGCA-AATGTGCAGAAT-GATGGCGACTGAC-----TGGGCAGAACTGGCGTATGGCACCA-GGTTGTAGCAATGGAGATG s panTro5.chr4 192943628 94 + 194502333 CCTTTTGAATTAGACTATTTGGGCA-AATGTGCAGAAT-GATAGTGACTGAC-----TGGGCAGAACTGGCGTATGACACCA-GGTTGTAGCAATGGAGATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827283 94 + 195804263 CCTTTTGAATTAGACTATTTGGGCA-AATGTGCAGAAT-GATAGTGACTGAC-----TGGGCAGAACTGGCGTATGACACCA-GGTTGTAGCAATGGAGATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864480 94 + 4876863 CCTTTTGAATTAGATTATTTGGGCA-AATGTGCAGAAT-GATGGCGACTGAC-----TGGGCAGAACTGGCGTATGACACCA-GGTTGTAGCAATGGAGATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755069 95 + 115148730 CCTTTTGAATTAGATTATTTGGGCA-AATGTGCAGAAT-GATGGCGACTGAC-----TGGGCAGAACTGGCGTATGACaccagggttgtagcaatggagatg i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189656706 94 - 190850796 ACTTTTAAATTAGATTATTTGGGCA-CATGTGCAGAGT-GATGGCAATTGAC------GGGCATAACTGGCGTATGATGCCAAGGTTGCAGCAATGGAGAGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148401 100 - 14256875 CCTTTTAAATCAGATTACTTGGGCA-AATGTGCAGAAT-GATGTCCATTGATGGGGCGGGGCGGAACTGGCGTGTGATGAGaaggttgtagcaatggagagt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1039904 95 - 2196201 CCTTTTACATCAGATTATTTGGGCA-AATGTGCAGAAT-GATGGCAATTGAC-----GGGGTGGAACTGGTGTATGATGACAAGGTTGTAATAATGGAGAGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427511 95 - 5030052 CCTTTTAAATTAGATTATTTGGGCA-AATGTGCAGAAT-GATGGCAACTGAC-----ggggagaaactggtgtatgatgccaaggttgtagcaatggagagt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11277735 97 - 11315646 CTTTTAAAATTCATTTTTGTAGGCAGAATATATAGAATAAATGAGAACTAAC-----CAAGCAGAATTGGCATATGATGACCTGGTTGTACCAATGTAAGTT i otoGar3.GL873580 C 0 I 305 e micMur3.chr14 17538272 155 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=60408.000000 s hg38.chr4_KI270789v1_alt 156585 22 + 205944 AAATAAAAGGGCCTGATCC-CTA s panTro5.chr4 192943722 22 + 194502333 AAATAAAAGGGCCTGATCC-CTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827377 22 + 195804263 AAATAAAAGGGCCTGATCC-CTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864574 22 + 4876863 AAATAAAAGGGCCTGATCC-CTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755164 22 + 115148730 aaataaaagggcctgatca-cta i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189656800 22 - 190850796 AAAGAAAAGAGCCTGATTC-CAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148501 22 - 14256875 aaagaaaggagcccaattc-cca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1039999 22 - 2196201 AAAGAAAAGAGCCCGATTC-CCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427606 22 - 5030052 aaagaaaagagtctgattc-cca i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278137 23 - 11315646 AAATACAAGGGCCTGAACCAAAA i otoGar3.GL873580 I 305 C 0 e micMur3.chr14 17538272 155 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86643032 767 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=136145.000000 s hg38.chr4_KI270789v1_alt 156607 34 + 205944 AAAGAACTTTAAAGGAAGAAACAACAGGACCCAG s panTro5.chr4 192943744 34 + 194502333 AAAGAACTTTAAAGGAAGAAACAACAGGACCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827399 34 + 195804263 AAAGAACTTTAAAGGAAGAAACAACAGGACCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864596 34 + 4876863 AAAGAACTTTAAAGGAAGAAACAACAGGACCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755186 34 + 115148730 aaagaattttaaaggaagaaacaacaggacccag i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189656822 34 - 190850796 AAAGAACTTTAAAGGACCAAACAACAGGACCCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148523 34 - 14256875 aaataactttaaaggaagaaacaacaggacccag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040021 34 - 2196201 AAAGAACGTTAAAGGAAGAAGCAACAGGACCCAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427628 34 - 5030052 aaagaactttaaaggaagaaacaataggacccag i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278160 34 - 11315646 AAAGAACATTGAAGGAAGAAATAATAGGACACAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86643799 34 - 129401213 AAAGGAATTAGAAGGAAGAAACAGGAGGGAATGC i mm10.chr8 I 767 C 0 e micMur3.chr14 17538272 155 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=145122.000000 s hg38.chr4_KI270789v1_alt 156641 46 + 205944 TAACAAATGGAAAG-TAAGTGATGAAGGAAGATAATCACAATAATAT s panTro5.chr4 192943778 46 + 194502333 TAACAAATGGAAAG-TAAGTGATGAAGGAAGATAATCACAATAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827433 46 + 195804263 TAACAAATGGAAAG-TAAGTGATGAAGGAAGATAATCACAATAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864630 46 + 4876863 TAACAAATGGAAAG-TAAGTGATGAAGGGAGATAATCACAATAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755220 41 + 115148730 taacaaatgga-----atgtgatgaaggaagat-atcacaataatat i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189656856 46 - 190850796 GAACAAATGGGATA-TACGTGACGAAACGCGATCAGCACAGTCACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148557 46 - 14256875 gaacaaacgggata-tgagagatgaaggaagatcatgacagtcacat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040055 46 - 2196201 GAACAAATGGGATT-TAAGTGATGAAGGAAGATCCTCACAGTCACAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427662 46 - 5030052 gaacaaatgggata-taagtgatgaaggaagatcatcacagtcacat i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17538427 46 - 93316391 TAACGAATGGAATG-TAAGTGATGAAGGAAGACAATCAAAATAATAT i micMur3.chr14 I 155 I 5519 s otoGar3.GL873580 11278194 40 - 11315646 TAATGAATGGAATG-GAAGTGATGAAGAAAGAC------AGTAATAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86643833 47 - 129401213 TGACAACTGGAAGGAAAAACAAGGAAGAAAGCAAAGCACAATGATGT i mm10.chr8 C 0 C 0 e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=518777.000000 s hg38.chr4_KI270789v1_alt 156687 207 + 205944 GTAGTGAATCTGAGTCTTTTGGCCA---GGGAAC---TTGTGACAAATATAGAAGTACC-------------------------------AAAAAAAAAAATAGAGAC----ATTCGAA-----AGATGGATATGGGATGG--AAAA-AATGAATT--GTTCAGGATGTGC----TGAGCTTGAAATATCAAGGT-CATATTCAACAGAAAAAGAAATATTGTGAAGGGGCCCAGATGTGAGGGTAGGGCAAAAAATGATATT s panTro5.chr4 192943824 210 + 194502333 ATAGTGAATCTGAGTCTTTTGGCCA---GGGAAC---TTGTGACAAATATAGAAGTACC-AA---------------------------AAAAAAAAAAAAGAGAGAC----ATTCGAA-----AGATGGATATGGGATGG--AAAA-AATGAATT--GTTCAGGATGTGC----TGAGCTTGAAATATCAAGGT-CATATTCAACAGAAAAAGAAATATTGTGAAGGGGCCCAGATGTGAGGGTAGGGCAAAAAATGATATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827479 207 + 195804263 ATAGTGAATCTGAGTCTTTTGGCCA---GGGAAC---TTGTGACAAATATAGAAGTACC-------------------------------AAAAAAAAAAAGAGAGAC----ATTCGAA-----AGATGGATATGGGATGG--AAAA-AATGAATT--GTTCAGGATGTGC----TGAGCTTGAAATATCAAGGT-CATATTCAACAGAAAAAGAAATATTGTGAAGGGGCCCAGATGTGAGGGTAGGGCAAAAAATGATATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864676 211 + 4876863 GTAGTGAATCTGAGTCTTTTGGCCA---GGGAGC---TTGTGACAAATATAGAAGTACC--------------------------------AAAAAAAAAATAGAGAC----ATTTGAAAGATGAGATGGATATGGGATGG--AAAA-AATGAACT--GTTCAGGATATGC----TGAGCTTGAAATATCAAGGT-CATATTCAATGGAAAAAGAAATATTGTGAAGGGGCCCAGATGTGAGGGTAGGGCAAAAAATGATATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112755261 208 + 115148730 gtagtgaatctgggtcttttggcca---gggagc---ttgtgacgaatatagaagtacc---------------------------------aaaaaaacatagagac----atttgaaaggtgagatggatatgggatgg--aaaa-aatgaatt--gttcaggatatgc----tgagcttgaaatatccaGGT-CGTATTCAACGG-AAAAGAAATATTGTGAAGGGGCCCAGATGTGA-GGTAGGGCAAAAAATGATATT i nomLeu3.chr7b C 0 M 781 s calJac3.chr3 189656902 202 - 190850796 GTTGTGAATCT------------------------------AAGGAATATAGAATTACC-AAACAAGT--------------AAAACTAAAAACAAAAAACTGGAGAG----ATTAGAAAGATGAGATGGATACGGGATGG--AAAA-AATGAGTT--GCT-AGGGTATGC----TGAGCTTGAACTCTCAACGT-CGTAGTCAACCAAGAAAGAAATGTTATAAAGGGGCCCAGATGTGAGGGTGAGGCAAAAATGG-TATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148603 227 - 14256875 gttgtgaatctgaggc-tttggcca---gggagc---ttgcaaggaatatagaattaccaAAaaaaat--------------aaaaataaaaatgaaaaACTAGAGAC----ATTAGAAAGATGAGATGGGTACAGGATGG--AAAAGAATGAGTT--GCT-AGGGTATGC----TGAGCCTGAACTCTCAAGGT-TGTATTCAATGAAAAAAGAAATATTGTAAAGGGGCCCAGATGTGAGGGTGAGGCACAAATGG-TATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040101 219 - 2196201 GTTGTGAATCTGAGGC-CTTGACCA---GGGAGC---TTGTAAGGAGTATAGAATTACC-AA--------------------AAAAATAAAGATAAAAAACTAGAGAC----CTTAGAAAGATGAGATGGATACGGGATGG--AAAA-AATGAGCT--GCT-A-GGTATGC----TGAGCTTGAACTATCAAGGT-TGTATTCAATGAAAAAAGAAATATTATAAAGGGGCCCAGATGTAAGAGTGAAGCAAAAAAGGATATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427708 228 - 5030052 gaagtgaatctgaggc-tttgacca---gggagc---ttgtaaggaataaagaattacc-aaaaaaata-------------aaaaataaaaacaaaaaaCTAGAGAT----ATTAGAAAGATGAGATGGATACGGGATGG--AAAAAAATGAGTT--GTT-AGGGTATGC----TGAGCTTGAACTACCAAGGT-TGTATTCAATGAAGAAAGAAATATTATAAAGGGGCCCAGATGTGAGGGTGGGGCAAAAAATGATATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278234 249 - 11315646 ATCATGGATCTGATGGTGTTGGCCA---GGGAGT---TG--AACAATTATAAAATTACC-aaaaataaaaaagaaagaaaaggaaaggaaaaaagaaacaagagagagtaaaaTACGAAAGATGAGACAGATAGGGGATGGGAAAAA-AGTGAGTCCAGTTTGGGATGTTC----TAAATTTGAAATATCAGGGGAAGTAGTCCATGGACAAAGCAATGTTGTGAAGAGGTCTGGATGAGAGGGTAGCACACAACAGGATCTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86643880 201 - 129401213 --------TCTGGGTT-TAAAGCCAGTTGGGAACCGACTGCAGCAACTATGGAATGGTC-------------------------------------AGAAATAGAGAG----GATTTGAAGATGAGATGCCCATGTGATGA--ATCA-AATGGCCA--GCGTGAAACATGTTAGATAGGTTTGAAATATTCA--C-AGTATTCAACAGAAAAAAAAA----AGAGAGAGGCCCAGACAAATGAGTAAGATGTAAGTTTGTCAT i mm10.chr8 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=291723.000000 s hg38.chr4_KI270789v1_alt 156894 120 + 205944 AGTAGAAAAGTCATTTGAGTAAAGAAAGTGGATATGTTAATAGGGAAAACAGAGTGCTTGGCCCAGGGCAGACCCTGTAAGATTCCCATGAGTAAGGATCAGCAGG--TCAAAGATTTACCA s panTro5.chr4 192944034 120 + 194502333 AGTAGAAAAGTCATTTGAGTAAAGAAAGTGGATATGTTAATAGGGAAAACAGAGTGCTTGGCCCAGGGCAGACCCTGTAAGATTCCCATGAGTAAGGATCAGCAGG--TCAAAGGTTTACCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827686 120 + 195804263 AGTAGAAAAGTCATTTGAGTAAAGAAAGTGGATATGTTAATAGGGAAAACAGAGTGCTTGGCCCAGGGCAGACCCTGTAAGATTCCCATGAGTAAGGATCAGCAGG--TCAAAGGTTTACCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3864887 120 + 4876863 AGTAGAAAAGTCATTTGAGTAAAGAAAGTGGATATGTTAATAGGGAAAACAGAGTGCTTGGCCCAGGGCAGACCCTGTAAGATTCCCATGAGTAAGGATCAGCGGG--TCAGAGGTTTACCA i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189657104 115 - 190850796 ------TGAGTCATTTGAGTCAAGAAAGTGGATGTACTATTAGGGGAAACAGATTGCTTGGCCAAGGGCAGATCCTGTAAGATTCCCAAGGGTGAGGA-CAGCGGGAAACAAAGGTTTGCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148830 115 - 14256875 ------TGAGTCATTTGAGTCAAGAACGTGGATGTAGTATCAGGGAAAACAGA-TGCTTGGCCAAGGGCAGATCCCATAGGATTCCCGAGGGTCAGGATCAGCGGGAAACAAAGGTTTGCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040320 116 - 2196201 ------TGAGTCATTTGAGTCAAGAAAGTGGATATAATATTAGGGAAAGCAGATTGCTTGGCGGAGGGCAGCTCCTGTAAGATTCCCAAGGGTAAGGATCAGCGGGAAACAAAGGTTTGCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3427936 116 - 5030052 ------TGAGTCATTTGAGTCAAGAAAGTGGATGTAGTATTAGGGAAAACAGATTGCTTGGCCAAGGGCAGACCCTATAAGATTCCCAAGGGTAAGGATCAGTGGGAAACAAAGGTTTGCCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278483 120 - 11315646 CACAGAAAAGTCTCTTAAATCAGGAAAGCAGATAAATTCAGAGGGAAAACAGAGTACTTGGTCAAGGACAGACCCTATAAGGGTCCTGTGGCTGAGGTTCAGCCTA--ACAAAGATCTACTA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86644081 118 - 129401213 AATAGACAAGCCATTTAAATTAAGAACGTGGATGAATTCAGAATCAAAGCAAACTACTCAAGTACAGTCATATCCTGCTGAATTCCTATGACCAAGTACCAGGAGT--TCAGAA--TGGCTG i mm10.chr8 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e nomLeu3.chr7b 112755469 781 + 115148730 M a score=66209.000000 s hg38.chr4_KI270789v1_alt 157014 27 + 205944 GTAAGAAGACAGAGGCCAAT---GAGACAA s panTro5.chr4 192944154 27 + 194502333 GTAAGAAGACAGAGACGAAT---GAGACAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827806 27 + 195804263 GTAAGAAGACAGAGACGAAT---GAGACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865007 27 + 4876863 GTAAGAAGACAGAGGCTAAT---GAGACAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756253 27 + 115148730 GTAAGAAGACAGAGGCCAAT---GAGACAA i nomLeu3.chr7b M 781 C 0 s calJac3.chr3 189657219 27 - 190850796 GTAAGAAGGCAGAGCCCAAT---GAGCCAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148945 27 - 14256875 GGAAGAAGGCAGAAGCCAGT---GAGCCTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040436 27 - 2196201 GTAAGAAGGCGGAGGCCAAT---GAGCCAA i cebCap1.NW_016107886v1 C 0 I 23 s aotNan1.NW_018492112v1 3428052 27 - 5030052 GTAAGAAGGCAGAGGCCAAT---GAGCCAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278603 28 - 11315646 GGAAGGGGATGGAGGTCTACGTAGAGAC-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86644199 24 - 129401213 GTGAGTGAGCAAATATCACC---TCAC--- i mm10.chr8 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=46994.000000 s hg38.chr4_KI270789v1_alt 157041 25 + 205944 AGCAAGAAAGCCCAGAGTCCAGAGA s panTro5.chr4 192944181 25 + 194502333 AGCAAGAAAGCCCAGAGTCCAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827833 25 + 195804263 AGCAAGAAAGCCCAGAGTCCAGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865034 25 + 4876863 AGCAAGAAAGCCCAGAGTCCAGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756280 24 + 115148730 A-CAAGAAAGCCCAGAGTACGGAGA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657246 24 - 190850796 AGCCGGAAGGCTGGGAGTCCAGAG- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148972 23 - 14256875 AGCCGGAAAGCTGGGAGTCC-GAG- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428079 24 - 5030052 AGCCGGAAAGCTGGGAGTCCAGAG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278631 25 - 11315646 AGGGAGAAAGCTTAGTGTCTCAGAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86644223 25 - 129401213 AGCAAGAAAGTGCAAAGCCCAGAAA i mm10.chr8 C 0 I 11 e cebCap1.NW_016107886v1 1040463 23 - 2196201 I e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=-650.000000 s hg38.chr4_KI270789v1_alt 157066 1 + 205944 G- s panTro5.chr4 192944206 1 + 194502333 G- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827858 1 + 195804263 G- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865059 1 + 4876863 G- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756304 1 + 115148730 G- i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11278656 2 - 11315646 GT i otoGar3.GL873580 C 0 C 0 e calJac3.chr3 189657270 0 - 190850796 C e cebCap1.NW_016107886v1 1040463 23 - 2196201 I e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e aotNan1.NW_018492112v1 3428103 0 - 5030052 C e saiBol1.JH378165 13148995 0 - 14256875 C e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=47011.000000 s hg38.chr4_KI270789v1_alt 157067 16 + 205944 CATGAGGGAGTCCTGT s panTro5.chr4 192944207 16 + 194502333 CATGAGGGAGTCCTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827859 16 + 195804263 CATGAGGGAGTCCTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865060 16 + 4876863 CATGAGGGAGTCCTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756305 16 + 115148730 CAAGAGGGAGTCCTGT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657270 16 - 190850796 CACGAGGGAGTCCTGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13148995 16 - 14256875 CTCCAGGGAGTCCCGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040486 16 - 2196201 CACGAGGGAGGCCTGT i cebCap1.NW_016107886v1 I 23 C 0 s aotNan1.NW_018492112v1 3428103 16 - 5030052 CACAAGGGAGTCCTGT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278658 15 - 11315646 CAAGAAGGA-TCATGC i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e dasNov3.JH570353 1487361 1657 - 2520184 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=61227.000000 s hg38.chr4_KI270789v1_alt 157083 19 + 205944 TTCAGAAG---GGGAGGGTGAC s panTro5.chr4 192944223 19 + 194502333 TTCAGAAG---GGGAGGGTGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827875 19 + 195804263 TTCAGAAG---GGGAGGGTGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865076 19 + 4876863 TTCAGAAG---GGGAGGGTGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756321 19 + 115148730 TTCCGAAG---GGGAGGATGAC i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657286 19 - 190850796 TTCCTGCG---GGGAGGGTGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149011 19 - 14256875 TTCCTGAG---GGGAGGGTGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040502 19 - 2196201 TTCCTGAG---GGGAGGGTGAC i cebCap1.NW_016107886v1 C 0 I 11 s aotNan1.NW_018492112v1 3428119 19 - 5030052 TTCCTGAG---GGGAAGGTGAC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278673 22 - 11315646 TTCTAATGCATGAGAGGGTCAT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1489018 19 - 2520184 TTAAGATG---GGAAGGGTGGC i dasNov3.JH570353 I 1657 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=28183.000000 s hg38.chr4_KI270789v1_alt 157102 14 + 205944 TAGCCGGAAGACTT s panTro5.chr4 192944242 14 + 194502333 TAGCCGGAAGACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827894 14 + 195804263 TAGCCGGAAGACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865095 14 + 4876863 TAGCCGGAAGACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756340 14 + 115148730 TAGCTGGAAGACTT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657305 14 - 190850796 TAACCAAGAGCCCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149030 13 - 14256875 -AGCCAAGGAGCCT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428138 14 - 5030052 TAACCAAGAAACCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278695 14 - 11315646 GCCCCAAAAGACTG i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1489037 14 - 2520184 TAGCCAAGAGAGCT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1040521 11 - 2196201 I e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=273295.000000 s hg38.chr4_KI270789v1_alt 157116 92 + 205944 GGAGAAAGTGGAAGATGAAGAAAATCCTTTGAGCGGGGGAGCACTGTCTGG--C-TTGGAAGATGGTCCTAGGAGATAGGTGGGGAAAT-GGCCAG s panTro5.chr4 192944256 92 + 194502333 GGAGAAAGTGGAAGATGAAGAAAATCCTTTGAGCGGGGGAGCACTGTCTGG--C-TTGGAAGATGGTCCTAGGAGATAGGTGGGGAAAT-GGCCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192827908 92 + 195804263 GGAGAAAGTGGAAGATGAAGAAAATCCTTTGAGCGGGGGAGCACTGTCTGG--C-TTGGAAGATGGTCCTAGGAGATAGGTGGGGAAAT-GGCCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865109 92 + 4876863 GGAGAAAGTGGAAGATGAAGAAAATCCTTTGAGTGGGGGAGCACTGTCTGG--C-TTGGAAGATGGTCCTAGGAGATAGGTGGGGAAAT-GGCCAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756354 92 + 115148730 GGAGAAAGCGGAAGATGAAGAAAATCCTTTGAGCAGCGGAGCACTGTCTGG--C-TTGGAAGATGGTCCTAGGAGATTGGTGGGGAAAT-GGCCAG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657319 89 - 190850796 GGAGAGGGTGATAGATGAGGAGCGTCCTCTGAGCAGGAGCACGCTGCCTGG--C-TTGGAAGGTGGTCCTAAGAG---GGTGGGGGAAG-GGCCGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149043 93 - 14256875 GGAGAGAGTGAAAGGTGAAGGGCATCCTCTGAGCGGGAGCACACTGTCTGG--C-TTGGAAGGTGGTCCTAAGAGATCGGTGGGGGAAACCGCCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040532 93 - 2196201 GGAGGGAGTGAGAGGTGAAGAGCGTCCTCTGAGCGGGAGCACACTGTCTGG--C-TCGGAAGGTGGCCCTAAGAGACTGGTGGGAAAAACGGCCAG i cebCap1.NW_016107886v1 I 11 C 0 s aotNan1.NW_018492112v1 3428152 93 - 5030052 GGAGAGAGTGAAAGATGAAGAGAATCCTCTGAGCAGGAGCACACTGTCTGG--C-TTGGAAGTTGGTCCTAAGAGATTGGTGGGGGAAATGGCCAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278709 94 - 11315646 GGAAAAAGTGGAAGATGAAGGAAAACCTTTGTGTAGCAGGGCATTATCCAA--CACTAGAGAATAGAATCAGGAGATCTTAGAGGGATATGGGCAG i otoGar3.GL873580 C 0 I 149 s dasNov3.JH570353 1489051 88 - 2520184 GGAAGAAGTAGAA---GAAGGAAAAGCTTTGATTAGCAGAGTGTCACCTGGTTC-CTGGAA-ACAGCGTCTGGGGACGGGT--GGAAGT-GGCCAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C a score=155159.000000 s hg38.chr4_KI270789v1_alt 157208 62 + 205944 -ATTTGGGGAGGAAGAATACTGGGGAATGTGAAA-GGTCTG--TGCCTAGAGAACAATGCGTCAGG s panTro5.chr4 192944348 62 + 194502333 -ATTTGGGGAGGAAGAATACTGGGGAATGTGAAA-GGTCTC--TGCCTAGAGAACAACGCGTCAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828000 62 + 195804263 -ATTTGGGGAGGAAGAATACTGGGGAATGTGAAA-GGTCTC--TGCCTAGAGAACAACGCGTCAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865201 64 + 4876863 -ATTTGGGGAGGAAGAATACTGGGGAATGTGAAA-GGTCTCTGTGCCTAGAGAACAACGCGTCAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756446 64 + 115148730 -ATGTGGGGAGGAAGAATACTGGGGAATGTGAAA-GGCCTCTGTGCCTAGAGAACAATGCATCAGG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189657408 49 - 190850796 -ATTTGGGGAGGAAGGGTGCTGGTGAATGCA----------------CAGAGAACAGCGTGTCAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149136 64 - 14256875 -ATTTTGGGAGGAAGAATACTGGTGAATGCAAAA-TGCTTCTGTGCGCAGAGAACGACGTGTCAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040625 64 - 2196201 -ATTTGGGGAGGAAGAATACTGCTGAATGCAAAA-GGCTTCTGTGCGCAGAGAACAACGTGTCAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428245 64 - 5030052 -ATTTCGGGAGGAAGAATACTGGTGAATGCAAAA-GGCTTCTGTGCACAGAGAACAACGTGTCAGA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1489139 64 - 2520184 AATTC--AGAGCAAGAATCTTGGTGAACGAAAAATGATGGCAGCACAGAGAGAACAAAGTTTCAAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e manLeu1.NW_012102221v1 2824361 0 - 2847728 C e chlSab2.chr7 134361775 158 + 135778131 I e cerAty1.NW_012001672v1 3404356 15 + 4669795 I e macNem1.NW_012013133v1 24374789 0 - 25927173 C e macFas5.chr5 187983463 0 + 189454096 C e rheMac8.chr5 189040577 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=656504.000000 s hg38.chr4_KI270789v1_alt 157270 113 + 205944 ACATGGTG---ATGGAATGAAG---------GGATTGGACAGCGCTGAACATTTTAGGAGACAGAAGGA---AAAGAAGAGTGAAGTGAGACAGAAAGACATGGA---------GGATGTGAAAGAAAATGTGAGGA s panTro5.chr4 192944410 113 + 194502333 ACATGGTG---ATGGAATGAAG---------GGATTGGACAGTGCTGAACATTTTAGGAGACAGAAGGA---AAAGAAGAGTGAAGTGAGACAGAAAGACATGGA---------GGATGTGAAAGAAAATGTGAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828062 113 + 195804263 ACATGGTG---ATGGAATGAAG---------GGATTGGACAGTGCTGAACATTTTAGGAGACAGAAGGA---AAAGAAGAGTGAAGTGAGACAGAAAGACATGGA---------GGATGTGAAAGAAAATGTGAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865265 113 + 4876863 ACATGGTG---ATGGAATGAAG---------GGATTGGACAGCGCTGAACATTTTAGGAGACAGAAGGA---GAAGAAGAGTGAAGTGAGACAGAAAGACATGGA---------GGATGTGAAAGAAAATGTGAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756510 113 + 115148730 ACATGGTG---GAGGAATGAAG---------GGATTGGACAGCACTGAACATTTTAGGAGACAGAAGGA---AAAGAAGAGTGAAGTGAAACAGAAAGACATGGA---------GGATGTGAAAGAAAATGTGAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040577 108 + 190429646 aCATGGTG---GTGGAATGAA----------GGACTGGACAGCGCTGAAC----TAGGAGACAGAAGGA---GAAAAAGAGGGAAGTAAGACAGAAAGACATAGA---------GAATGTAAAAGAAAATGTGAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983463 108 + 189454096 aCATGGTG---GTGGAATGAA----------GGACTGGACAGTGCTGAAC----TAGGagacagaagga---gaaaaagagggaagtaagacagaaagacataga---------aaATGTAAAAGAAAATGTGAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24374789 108 - 25927173 aCATGGTG---GTGGAATGAA----------GGACTGGACAGCGCTGAAC----TAGGagacagaagga---gaaaaagagggaagtaagacagaaagacataga---------gaatgtaaaagaaaATGTGAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404371 107 + 4669795 aCATGGTG---GTGGAATGAA----------GGACTGGACAGCGCTGAAC----TAGGagacagaagga----aaaaagagggaagtaagacagaaagacataga---------gaatgtaaaagaaaATGTGAGGA i cerAty1.NW_012001672v1 I 15 C 0 s manLeu1.NW_012102221v1 2824361 108 - 2847728 aCATGGTG---GTGGAATGAA----------GGACTGGACAGCGCTGAAC----TAGGagacagaagga---aaaaaagagggaagtaagacagaaagacataga---------gaatgtaaaagaaaATGTGAGGA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657457 112 - 190850796 --ATGGTGGCTGTGGAATAAAG---------GGGGTGCACGATGCTGAACGCTCTAGGAGA-AGAAGGA----AAGAAGAGTGAAGTAGGACAGGACGACACGGA---------GAATGGGAAAGAAAATGTTAGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149200 93 - 14256875 --ACGGTGGCCGTGGAATAA---------------------ACACTGAACACTCTGGGAGACAGAAGGA----AAGAAGAGGGA--------AGGAAGGTATGGA---------GAATGTGAAAGAAAATCTTAGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040689 113 - 2196201 --ACGGTGGCCGTGGGATACAG---------GGAGTGGACAACGCTGAACACTTTAGGAGACAGAAGGA----AAGAAGGGTGCAGTAAGGCAGGAAGACATGGA---------GAATGTGAAAGAAAATCTTAGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428309 113 - 5030052 --ATGGTGGCTGTGGAATAAAG---------GGAGTGGACAATGCTGAACACTCTAGGAGTCAGAAGGA----AAGAAGAGTGAAGTAAGACAGGAAGACATGGA---------GAATGTGAAAGAAAATATTAGGA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1489203 131 - 2520184 --ACAGTGTCAGCGGAGCAAAGGCAACTAGAAGGTTGGCAAATGGACGGC----AGGGACACAGGAAGAGTGGAACATGctagaaggcagaatggaagagatggagaggaactggaaaggaaacggaaacatcaaga i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e mm10.chr8 86644248 11 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=813608.000000 s hg38.chr4_KI270789v1_alt 157383 101 + 205944 TTTATATTCAAAAT--ACCAAAAAGCTTTCTAATTCCTAGACTTGCCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC s panTro5.chr4 192944523 101 + 194502333 TTTATATTCAAAAT--ACCAAAAAGCTTTCTAATTCCTAGACTTGCCCCTGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828175 101 + 195804263 TTTATATTCAAAAT--ACCAAAAAGCTTTCTAATTCCTAGACTTGCCCCTGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865378 101 + 4876863 TTTATATTCAAAAT--ACCAAAACGCTTTCTAATTCCTAGACTTGCCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATGCAGATATCCCCAT--------ATACAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756623 101 + 115148730 TTTATATTCAAAAT--ACCAAAAAGCTTTCTAATTCCTAGACTTGCCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040685 101 + 190429646 TTTATATTCAAAAT--ATCAAAAAGCTTTCTTATTGCTAGACTCACCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983571 101 + 189454096 TTTATATTCAAAAT--ATCAAAAAGCTTTCTAATTGCTAGACTCACCCCTGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24374897 101 - 25927173 TTTATATTCAAAAT--ATCAAAAAGCTTTCTAATTGCTAGACTCACCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404478 101 + 4669795 TTTATATTCAAAAT--ATCAAAAAGCTTTCTAATTGCTAGACTCGCCCCCGGCTAGAGTGGGCTATCTGGGTGAAGAGTTTATACAGATATCCTCAT--------ATACAC i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824469 101 - 2847728 TTTATATTCAAAAT--ATCAAAAAGCTTTCTAATTGCTAGACTCGCCCCCGGCTAGAGTGGGCTATCTGAGTGAAGAGTTTATACAGATATCCCCAT--------ATACAC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657569 101 - 190850796 TTTATATTCAAAGG--ATCAAAAAGCTTTCTAATTGTCAGACTTGCCTCCAGCTAGACCGGGCCGTATGGGTGGAGAGTTTGTGTAGGTATCCCCGT--------ATACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149293 101 - 14256875 TTTATATTCAAAAG--ACTAAAAAACATTCTAATTGTTAGACTTGCCCCCAGTTAGAGAGGGCTGTGTGGGTGGAGAGTTTATATAGATATCCCCAT--------GTACAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040802 101 - 2196201 TTTATATTCAAAAG--ATCAAAAAACGTTCTAATTGTTAGACTTGCCCCCAGCTACAGTGGGCTGTGTGGGCGGAGAGTTTTTATAGATATCCCTGT--------ATACAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428422 101 - 5030052 TTTATATTCAAAAG--ATCAAAAAACTTCCTAATTGTTAGACTTGCCCCCAGCTAGAGTGGGCTGTATGGGTGGAGAGTTTATATAGATATCCCCGT--------ATACAC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644259 91 - 129401213 TTTATGTTTGAAATACATTAAAAAAATT----------ATACCTGTCCTGAACTAGAGAGGTCTATCTTGG----------ATACCAATAGTTCTATTAATAAAAACATAC i mm10.chr8 I 11 C 0 s dasNov3.JH570353 1489334 101 - 2520184 cataggttcaaatt--ttcgaaaagctttttagttcgcagacttgtccataattgaagtgggctaccttggTTGAGAGTTTATAAAGATATTTCCCT--------ACACAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e canFam3.chr16 16988332 1915 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=233336.000000 s hg38.chr4_KI270789v1_alt 157484 34 + 205944 TATTTATTCTACTTA---GATAA----CACTCTAGAGACAC s panTro5.chr4 192944624 34 + 194502333 TATTTATTCTACTTA---GATAA----CACTCTAGAGACAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828276 34 + 195804263 TATTTATTCTACTTA---GATAA----CACTCTAGAGACAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865479 34 + 4876863 TATTTATTCTACTTA---GATAA----CACTCTAGAGACAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756724 34 + 115148730 TATTTATTCTACTTA---GATAA----CACTCTAGAGACAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040786 34 + 190429646 TATCTATTCTACTTA---GATAA----CATTCTAGAGACAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983672 34 + 189454096 TATCTATTCTACTTA---GATAA----CATTCTAGAGACAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24374998 34 - 25927173 TATCTATTCTACTTA---GATAA----CATTCTAGAGACAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404579 34 + 4669795 TATCTATTCTACTTA---GATAA----CATTCTAGAGACAC i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824570 34 - 2847728 TATCTATTCTACTTA---GATAA----CATTCTAGAGACAC i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657670 37 - 190850796 AGTCTATTCTACATTCATAATAA----CGTTCGAAAGACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149394 37 - 14256875 CATCTATTCTACATCAATAATAA----CATTTGAGAGACAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040903 37 - 2196201 CATCTATTCTACATCAATAAGAA----CATTCGAGAGACAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428523 37 - 5030052 CATCTATTCTACATCAGTAATAA----CATTCAAGAGACAC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644350 36 - 129401213 TG-CTGACCTACCTTAATTGTAA----CATTCTGGACGTGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16990247 38 - 59632846 TATCTATCATACTTG---AATAAAAAGCATTCTAGCAATAA i canFam3.chr16 I 1915 C 0 s dasNov3.JH570353 1489435 33 - 2520184 CGTCTATCATCCTTAAA-TATAA----CATTCTAGAAA--- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17538473 5519 - 93316391 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=599326.000000 s hg38.chr4_KI270789v1_alt 157518 59 + 205944 TATGTCCTGTTTTC-TTGA----AAGACTCGTACCAATGGTGACATTTCAGATCTTCTAAGGAA s panTro5.chr4 192944658 59 + 194502333 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGGTGACATTTCAGGTCTTCTAAGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828310 47 + 195804263 TGTGTCCTGTTTTC-TCGA----AAGACTCATACCAATGG------------TCTTCTAAGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865513 59 + 4876863 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGGTGACATTTCAGATCTTCTAAGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756758 59 + 115148730 TATGTCCTGTTTTC-TCAA----AAGACTCATACCAATGGTAACATTTCAGATCTGCTAAGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040820 59 + 190429646 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGCTGACATTTCAGATCTGCTAAGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983706 59 + 189454096 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGCTGACATTTCAGATCTGCTAAGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375032 59 - 25927173 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGCTGACATTTCAGATCTGCTAAGGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404613 59 + 4669795 TATGTCCTGTTTTC-TCGA----AAGACTCATACCAATGCTGACATTTCAGATCTGCTAAGGAA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824604 59 - 2847728 TATGTCCTGTTTTC-TCAA----AAGACTCATACCAATGCTGACATTTCAGATCTGCTAAGGAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657707 59 - 190850796 TCGGTCCTGTTTTC-TCAA----AAGACTCACACCAATGGTGACGTTTCAGATCTGCTAAGGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149431 59 - 14256875 TATGCCGTGTTTTC-TCAA----AAGACTCACACCAATGGTGACATTTCAGATCTGCTAAGGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040940 59 - 2196201 TATGCTGTGTTTTC-TCAA----AAGACTCACACCAACGGTGACATTTCAGATCTGCTAAGGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428560 59 - 5030052 TATGTCGTGTTTTC-TCAA----AAGACTCACACCAATGGTGACATTTCAGATCTGCTAAGGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17543992 59 - 93316391 TATATCCTATTTTC-TCAA----AAGTCTCATACCACTGGTGAAATTTCAGATTTGTTAAGGAA i micMur3.chr14 I 5519 C 0 s mm10.chr8 86644386 60 - 129401213 TCCTTCTGGTTTTTGTCAA----AAGATCCATATCCGTAGAGAAATTTCAGATCTGTGAAGAAA i mm10.chr8 C 0 I 55 s canFam3.chr16 16990285 59 - 59632846 TACCTGTTATTTGC-TCAA----AAGAGTCATCCCAATGGTGAAATTTTAAATCTGTAAAGGAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489468 63 - 2520184 TATGTCCTGTTTCC-TTAGAACCAAGAGTTGTCCCAGTGATGAAATCTCAGATCTGTTAAGGAA i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=171335.000000 s hg38.chr4_KI270789v1_alt 157577 16 + 205944 GTTTATTTTAGCTTCA s panTro5.chr4 192944717 16 + 194502333 CTTTATTTTAGCTTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828357 16 + 195804263 CTTTATTTTAGCTTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865572 16 + 4876863 GTTTATTTTAGCTTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756817 16 + 115148730 GTTTATTTTAGCTTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040879 16 + 190429646 GTTTATTTTAGCTTCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983765 16 + 189454096 GTTTATTTTAGCTTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375091 16 - 25927173 GTTTATTTTAGCTTCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404672 16 + 4669795 GTTTATTTTAGCTTCA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824663 16 - 2847728 GTTTATTTTAGCTTCA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657766 16 - 190850796 GTTTATTTTAGCTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149490 16 - 14256875 GTTTATTTTAGCTTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1040999 16 - 2196201 GTTTATTTTAGCTTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428619 16 - 5030052 GTTTATTTTAGCTTCA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544051 16 - 93316391 GTTTATTGTACCTTCA i micMur3.chr14 C 0 I 50 s canFam3.chr16 16990344 16 - 59632846 GTTTATTATAGCTTGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489531 16 - 2520184 GTTTAGTGTGGCTACA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=213569.000000 s hg38.chr4_KI270789v1_alt 157593 43 + 205944 AAATAACACGGGTGGC--ACGGGG-G--------------AAGT--------ATTTTTAGCCTCAAGG s panTro5.chr4 192944733 43 + 194502333 AAATAACACGGGTGGC--ACGGGG-G--------------AAGT--------ATTTTTAGCCTCAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828373 43 + 195804263 AAATAACACGGGTGGC--ACGGGG-G--------------AAGT--------ATTTTTAGCCTCAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865588 43 + 4876863 AAATAACACGGGTGGT--GCGGGG-G--------------AAGT--------ATTTTTAGCCTCAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756833 59 + 115148730 AAACAACACgggtggcgggcgggg-gggggggtgggggTTAAGT--------ATTTTTAGCCTCAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040895 40 + 190429646 AAACAACATGGG------GCAGGGTG--------------AAGT--------ATTTTTAGCCTCAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983781 40 + 189454096 AAACAACATGGG------GCAGGGTG--------------AAGT--------ATTTTTAGCCTCAGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375107 40 - 25927173 AAACAACATGGG------GCAGGGTG--------------AAGT--------ATTTTTAGCCTCAAGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404688 40 + 4669795 AAACAACATGGG------GCAGGGTA--------------AAGT--------ATTTTTAGCCTCAAGG i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824679 40 - 2847728 AAACAACATGGG------GCAAGGTG--------------AAGT--------ATTTTTAGCCTCAAGG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657782 35 - 190850796 GGGCAACATG--------GTGG---G--------------AAGT--------GTTTTTAGCCTCGGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149506 36 - 14256875 GAAAAACACGA-------GTGG---G--------------AAGT--------AGTTTTAGCCTCAGGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041015 36 - 2196201 GAACAACACAG-------GTGG---G--------------AAGT--------ATTTTTAGCCTCAGGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428635 36 - 5030052 GAACAACATGG-------GTGG---G--------------AAGT--------ATTTTTAGCCTCAGGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16990360 37 - 59632846 AAACAACATAAG------GAGG---G--------------GAAT--------AATTTTGACCTCAAGG i canFam3.chr16 C 0 I 22 s dasNov3.JH570353 1489547 48 - 2520184 AAACAA-ACGGAT-----TTGAGGGG--------------AAGTGGTAGGGGATTTGGGGCCTCAAGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544067 50 - 93316391 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=79593.000000 s hg38.chr4_KI270789v1_alt 157636 10 + 205944 AGCGTTTTAg s panTro5.chr4 192944776 10 + 194502333 AGCGTTTTAg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828416 10 + 195804263 AGCGTTTTAg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865631 10 + 4876863 AGCATTTTAg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756892 10 + 115148730 AGCATTTTAg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040935 10 + 190429646 AACATTTTAg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983821 10 + 189454096 AACATTTTAg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375147 10 - 25927173 AACATTTTAg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404728 10 + 4669795 AACATTTTAg i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824719 10 - 2847728 AACATTTTAg i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657817 10 - 190850796 AGCATTTTAg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13149542 10 - 14256875 AGCATTTTAG i saiBol1.JH378165 C 0 M 520 s cebCap1.NW_016107886v1 1041051 10 - 2196201 AGCATTTCAG i cebCap1.NW_016107886v1 C 0 I 25 s aotNan1.NW_018492112v1 3428671 10 - 5030052 AGCATTTTAg i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1489595 10 - 2520184 AGCCTTTTGA i dasNov3.JH570353 C 0 I 31 e micMur3.chr14 17544067 50 - 93316391 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=157147.000000 s hg38.chr4_KI270789v1_alt 157646 35 + 205944 gccaggcacagtggctcaggcctgtaatcccagca s panTro5.chr4 192944786 35 + 194502333 gccagggacagtggctcaggcctgtaatcccagca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828426 35 + 195804263 gccagggacagtggctcaggcctgtaatcccagca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865641 35 + 4876863 gccaggcacagtggctcaggcctgtcatcccagca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756902 35 + 115148730 gccaggcacggtggctcaggcctgtaatcccagca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040945 35 + 190429646 gctggggacggtcgctcacgcctgtaatcccagca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983831 35 + 189454096 gctggggacggtcgctcacgcctgtaatcccagca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375157 35 - 25927173 gctggggacggtcgctcacgcctgtaatcccagca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404738 35 + 4669795 gctggggacggtcgctcatgcctgtaatcccagca i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824729 35 - 2847728 gctggggacggtcgctcacgcctgtaatcccagca i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657827 34 - 190850796 -tcaggcgggctgacttacgcctgtatttccagca i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3428681 34 - 5030052 -tcaggcgtgctggcttacgcctgtatttccagca i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1041061 25 - 2196201 I e micMur3.chr14 17544067 50 - 93316391 I e dasNov3.JH570353 1489605 31 - 2520184 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e saiBol1.JH378165 13149552 520 - 14256875 M e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=907420.000000 s hg38.chr4_KI270789v1_alt 157681 160 + 205944 ctttgtgaggctgaggtgggaggatcatgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccatctctactaaagata-caaaaattagctgggcttggtcgtgtacacctgtaatcccagctactcaggagactggggcaggagaatca s panTro5.chr4 192944821 160 + 194502333 ctttgtgaggctgaggtgggaggatcatgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccatctctactaaagata-caaaaattagccgggcttggtcgtgtacacctgtaatcccagctactcaggagactgaggcaggagaatca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828461 160 + 195804263 ctttgtgaggctgaggtgggaggatcatgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccatctctactaaagata-caaaaattagccgggcttggtcgtgtacacctgtaatcccagctactcaggagactgaggcaggagaatca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865676 160 + 4876863 ctttgtgaggccaaggtgggaggatcatgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccgtctctactaaagata-caaaaattagccgggcttggtggtgtactcctgtaatcccagctactcaggagactgaggcaggagaatca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112756937 160 + 115148730 ctttgggaggcggaggtgggaggatcatgaggtcaggagttcaagaccagcctggccaagatagtgaaaccccgtctctactaaagata-caaaaattagccaggcttggtggtgcacacctgtaatcccagctactcaggagactgaggcgggagaatca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189040980 160 + 190429646 ctttgggaggccgaggtgggtggatcatgtggtcaggagttcgacaccagcctggccaacatagtgaaaccctgtctctactaaaaata-caaaaattagccaagtgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187983866 160 + 189454096 ctttgggaggccgaggtgggtggatcatgtggtcaggagttcgacaccagcctggccaacatagtgaaaccctgtctctactaaaaata-caaaaattagccaagtgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375192 160 - 25927173 ctttgggaggccgaggtgggtggatcatgtggtcaggagttcgacaccagcctggccaacatagtgaaaccctgtctctactaaaaata-caaaaattagccaagtgtggtggcgtgtgcctgtaatcccagctactcaggagggtgaggcaggagaatca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404773 160 + 4669795 ctttgggaggccgaggtgggtggatcatgtggtcaggagttcgacaccagcctggccaacatagtgaaaccctgtctctactaaaaata-caaaaattagccaagtgtggtggcgtgtgcctgtaatcccagctactcaggagggtgaggcaggagaatca i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824764 160 - 2847728 ctttgggaggccgaggtgggtggatcatgtggtcaggagttcgacaccagcctggtcaacatagtgaaaccctgtctctactaaaaata-caaaaattagccaagtgtggtggcgtgcgcctgtaatcccagctactcaggagggtgaggcaggagaatca i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189657861 147 - 190850796 ctttgggaaggtgaggcaggcagatcacgaggtcaggagtttgagaccagcctggggaacatggtaaaacttcttctctactaaaaaaa-cagaaattagcaggatgtggtggtgcatgcctttaatcccagcttttg-------------aggagaatca i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1041086 160 - 2196201 ttttgcgagggtgaggcaggcagatcacgagggcaggagtttgagaccagcctggcgaatatggtaaaacctcttccctactaaaaaaa-caaaaattagctggatgtggtgctgcacgcctttattcccagctattgaggaggctgaggcaggagaatca i cebCap1.NW_016107886v1 I 25 C 0 s aotNan1.NW_018492112v1 3428715 160 - 5030052 ctttgggagggt-aagcaggcagatcacgaggtcagaagtttgagaccagcctggtgaacgtggtaaaacctcttctctactaaaaaaaccaaaaattagctggatgtggtggtgcatgcctttaatcccagttattggggaggctgaggcaggagaatca i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17544067 50 - 93316391 I e dasNov3.JH570353 1489605 31 - 2520184 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e saiBol1.JH378165 13149552 520 - 14256875 M e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=466977.000000 s hg38.chr4_KI270789v1_alt 157841 65 + 205944 cttgaacccggaaggtggaggttgcagtgatctgagattatgccactgcactccagcctggttga s panTro5.chr4 192944981 65 + 194502333 cttgaacccgggaggtggaggttgcagtgatctgagattatgccactgcactccagcctggttga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828621 65 + 195804263 cttgaacccgggaggtggaggttgcagtgatctgagattatgccactgcactccagcctggttga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865836 65 + 4876863 cttgaacccggaaggtggaggttgcagtgatctgagattatgccactgcactccagcctggttga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757097 65 + 115148730 cttgaacacggaaggtggaggttgcagtgatctgagattgtgccactgcactccagcctggttga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041140 65 + 190429646 cttgaacccaggaggcagaggttgcagtgatctgagattgtgccactgtactccagcctggttga i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984026 65 + 189454096 cttgaacccaggaggcagaggttgcagtgatctgagattgtgccactgtactccagcctggttga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375352 65 - 25927173 cttgaacccaggaggcagaggttgcagtgatctgagattgtgccactgtactccagcctggttga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3404933 65 + 4669795 cttgaacccaggaggcagaggttgcagtgatctgagattgtgccactgtactccagcctggttga i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2824924 65 - 2847728 cttgaacccaggaggcagaggttgcagtgatctgagattgtgccactgtactccagcctggttga i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658008 65 - 190850796 ctggaacctgggaggcagaggttacggtgagctgaaatcgcgccactgtactccggcttgggtga i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150078 65 - 14256875 cctgaacccaggagacggaggttgcggtgagccgagatcgcgccattgcactccagcctgggtaa i saiBol1.JH378165 M 520 C 0 s cebCap1.NW_016107886v1 1041246 65 - 2196201 cttgaacctgggaggcgggggttgcagtgagcggaaatcgtgccattgtactccagcctgggcga i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3428875 65 - 5030052 cttgaacctgggaggcggaggatgcagtgagccgaaactgcgccactgtactccagcctgggtga i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17544067 50 - 93316391 I e dasNov3.JH570353 1489605 31 - 2520184 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=112497.000000 s hg38.chr4_KI270789v1_alt 157906 17 + 205944 c-agagcgagactctgtc s panTro5.chr4 192945046 17 + 194502333 c-agagcgagactctgtc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828686 17 + 195804263 c-agagcgagactctgta i panPan2.chr4 C 0 I 4 s gorGor5.CYUI01015356v1 3865901 17 + 4876863 c-agagcgagactctgtc i gorGor5.CYUI01015356v1 C 0 I 8 s nomLeu3.chr7b 112757162 17 + 115148730 c-agagcaagactctgtc i nomLeu3.chr7b C 0 I 2 s rheMac8.chr5 189041205 17 + 190429646 c-agagtgagactctgtc i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187984091 17 + 189454096 c-agagtgagactctgtc i macFas5.chr5 C 0 I 2 s macNem1.NW_012013133v1 24375417 17 - 25927173 c-agagtgagactctgtc i macNem1.NW_012013133v1 C 0 I 2 s cerAty1.NW_012001672v1 3404998 17 + 4669795 c-agagtgagactctgtc i cerAty1.NW_012001672v1 C 0 I 2 s manLeu1.NW_012102221v1 2824989 17 - 2847728 c-agagtgagactctgtc i manLeu1.NW_012102221v1 C 0 I 6 s calJac3.chr3 189658073 17 - 190850796 c-agagcaagattccatc i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13150143 18 - 14256875 caagagtgaaactccgtc i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 1041311 17 - 2196201 c-agagcaagattccatc i cebCap1.NW_016107886v1 C 0 I 2 s aotNan1.NW_018492112v1 3428940 17 - 5030052 c-agagcaagattccatc i aotNan1.NW_018492112v1 C 0 I 2 s dasNov3.JH570353 1489636 10 - 2520184 C-AAAGCaaaa------- i dasNov3.JH570353 I 31 C 0 e micMur3.chr14 17544067 50 - 93316391 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e chlSab2.chr7 134361775 158 + 135778131 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=45077.000000 s hg38.chr4_KI270789v1_alt 157923 17 + 205944 aa-----------------aaaaaaaaaaa-------------------aaaa s panTro5.chr4 192945063 12 + 194502333 ----------------------aaaaaaaa-------------------aaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828707 17 + 195804263 aa-----------------aaaaaaaaaaa-------------------aaaa i panPan2.chr4 I 4 C 0 s gorGor5.CYUI01015356v1 3865926 17 + 4876863 aa-----------------aaaaaaaaaaa-------------------aaaG i gorGor5.CYUI01015356v1 I 8 C 0 s nomLeu3.chr7b 112757181 17 + 115148730 aa-----------------aaaaagaaaaa-------------------gaaa i nomLeu3.chr7b I 2 C 0 s rheMac8.chr5 189041225 36 + 190429646 aa-----------------aaaataaataaataaataaataaataattaaaAA i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187984110 36 + 189454096 aa-----------------aaaataaataaataaataaataaataaTTTAAAA i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24375436 36 - 25927173 aa-----------------aaaataaataaataaataaataaataattaaaAA i macNem1.NW_012013133v1 I 2 C 0 s cerAty1.NW_012001672v1 3405017 36 + 4669795 aa-----------------aaaataaataaataaataaataaataattaaaAA i cerAty1.NW_012001672v1 I 2 C 0 s chlSab2.chr7 134361933 14 + 135778131 aa-----------------aaaaaaaa----------------------aaaa i chlSab2.chr7 I 158 C 0 s manLeu1.NW_012102221v1 2825012 36 - 2847728 aa-----------------taaataaataaataaataaataaataaTTTAAAA i manLeu1.NW_012102221v1 I 6 C 0 s calJac3.chr3 189658092 9 - 190850796 aa----------------------aaa----------------------aaaa i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13150163 31 - 14256875 aaaaacaaaaacaaaaacaaaaacaaa----------------------aaaA i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 1041330 14 - 2196201 aa-----------------aaaaaaaa----------------------aaaa i cebCap1.NW_016107886v1 I 2 I 17 s aotNan1.NW_018492112v1 3428959 14 - 5030052 aa-----------------aaaaaaaa----------------------aaaa i aotNan1.NW_018492112v1 I 2 I 1 s dasNov3.JH570353 1489646 17 - 2520184 aa-----------------aaaaaaaaaaa-------------------aaaa i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544067 50 - 93316391 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=10132.000000 s hg38.chr4_KI270789v1_alt 157940 2 + 205944 aG s panTro5.chr4 192945075 2 + 194502333 aG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828724 2 + 195804263 ga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865943 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757198 2 + 115148730 aa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041261 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984146 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375472 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405053 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134361947 2 + 135778131 aa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825048 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658101 2 - 190850796 aa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150194 2 - 14256875 GA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428974 1 - 5030052 -a i aotNan1.NW_018492112v1 I 1 C 0 s dasNov3.JH570353 1489663 2 - 2520184 aa i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1041344 17 - 2196201 I e micMur3.chr14 17544067 50 - 93316391 I e canFam3.chr16 16990397 22 - 59632846 I e mm10.chr8 86644446 55 - 129401213 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=82918.000000 s hg38.chr4_KI270789v1_alt 157942 14 + 205944 AGAGGACTTTAGTA s panTro5.chr4 192945077 14 + 194502333 AGAGGACTTTAGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828726 14 + 195804263 aGAGGACTTTAGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865945 14 + 4876863 AGAGGACTTTAGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757200 14 + 115148730 agaaGACTTTAGTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041263 14 + 190429646 GGAGGATTTTAGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984148 14 + 189454096 GGAGGATTTTAGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375474 14 - 25927173 GGAGGATTTTAGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405055 14 + 4669795 GGAGGATTTTAGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134361949 14 + 135778131 GGAGGATTTTAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825050 14 - 2847728 GGAGGATTTTAGTA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658103 14 - 190850796 GGAGCATTTTAGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150196 14 - 14256875 GGAGCATTTTAGTG i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428975 14 - 5030052 GGAGCATTTTAGTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644501 13 - 129401213 GAAGCACCTCATA- i mm10.chr8 I 55 C 0 s dasNov3.JH570353 1489665 4 - 2520184 ---aGAT------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1041344 17 - 2196201 I e micMur3.chr14 17544067 50 - 93316391 I e canFam3.chr16 16990397 22 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=6864.000000 s hg38.chr4_KI270789v1_alt 157956 1 + 205944 C s panTro5.chr4 192945091 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828740 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865959 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757214 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041277 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984162 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375488 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405069 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134361963 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825064 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658117 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150210 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428989 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544117 1 - 93316391 C i micMur3.chr14 I 50 C 0 s mm10.chr8 86644514 1 - 129401213 C i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 1041344 17 - 2196201 I e dasNov3.JH570353 1489669 0 - 2520184 C e canFam3.chr16 16990397 22 - 59632846 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=65173.000000 s hg38.chr4_KI270789v1_alt 157957 15 + 205944 TTCTGAAACTCCTCT s panTro5.chr4 192945092 15 + 194502333 TGCTGAAACTCCTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828741 15 + 195804263 TGCTGAAACTCCTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865960 15 + 4876863 TTCTGAAACTCCTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757215 15 + 115148730 TTCTGAAACTCCTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041278 15 + 190429646 TTCCGAAACTGCTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984163 15 + 189454096 TTCCGAAACTGCTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375489 15 - 25927173 TTCCGAAACTGCTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405070 15 + 4669795 TTCCGAAACTGCTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134361964 15 + 135778131 TTCCGAAACTCCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825065 15 - 2847728 TTCCGAAACTGCTCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658118 2 - 190850796 TT------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150211 2 - 14256875 TT------------- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3428990 2 - 5030052 TT------------- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544118 15 - 93316391 TTCTGAAATTCCTCT i micMur3.chr14 C 0 C 0 s mm10.chr8 86644515 15 - 129401213 TTCTGCATTTTCTGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16990419 15 - 59632846 TTCTGAAATTCTTTT i canFam3.chr16 I 22 C 0 e cebCap1.NW_016107886v1 1041344 17 - 2196201 I e dasNov3.JH570353 1489669 0 - 2520184 C e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=614061.000000 s hg38.chr4_KI270789v1_alt 157972 56 + 205944 GTGTAGCTCTTCGTTCAAGCAATCCTAACTCAGAAGTACAAGAAGGATAATATTCT s panTro5.chr4 192945107 56 + 194502333 GTGTAGCTCTTTGTTCAAGCAATCCTAACTCAGAAGTACAAGAAGGATAATATTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828756 56 + 195804263 GTGTAGCTCTTTGTTCAAGCAATCCTAACTCAGAAGTACAAGAAGGATAATATTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3865975 56 + 4876863 GTATAGCTCTTTGTTCAAGCAATCCTAACTCCGAAGTACAAGAAGGATAATATTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757230 56 + 115148730 GTGTAGCTCTTTGTTCAAGCAATCCTAACTCAGAAGTACAAGAAGGATAATATTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041293 56 + 190429646 GTGTAGCTCTTTGTTTAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAACATTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984178 56 + 189454096 GTGTAGCTCTTTGTTTAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375504 56 - 25927173 GTGTAGCTCTTTGTTTAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405085 56 + 4669795 GTGTAGCTCTTTGTTTAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134361979 56 + 135778131 GTGTAGCTCTTTGTTCAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825080 56 - 2847728 GTGTAGCTCTTTGTTTAAGCAATCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658120 56 - 190850796 GTGTAGCTCTTTGTTCAGTCAGTTCTAACTCAGAAGTAAGAGAAGGATGATATTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150213 56 - 14256875 GTGTAACTCTTTGTTCAGTCAGTCCTAACTCAGAAGTAAGTGAAGCATAATATTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041361 56 - 2196201 GTGTAGCTCTTTGTTCAGTCAGTCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i cebCap1.NW_016107886v1 I 17 C 0 s aotNan1.NW_018492112v1 3428992 56 - 5030052 GTGTAGCTCTTTGTTCAGTCAGTCCTAACTCAGAAGTAAGAGAAGGATAATATTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544133 56 - 93316391 ATGGAGCTCTTTGTTCAAGTGATCCTAACCCAGAAGCAAAAGAAAGATAATTTTCT i micMur3.chr14 C 0 I 106 s mm10.chr8 86644530 53 - 129401213 CTAAAGCCCTTTCTTCAAGAGGCCCTAACTCAGAGGAAAGAGA---ATAATCTTCT i mm10.chr8 C 0 I 2 s canFam3.chr16 16990434 56 - 59632846 GTGTGGTTTCTTGTTCAAGCGATTGTAACTCAGAAGCTAAAGAAGGATGACGTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489669 9 - 2520184 -----------------------------------------------TGACATTCT i dasNov3.JH570353 C 0 C 0 e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=188775.000000 s hg38.chr4_KI270789v1_alt 158028 16 + 205944 TGTGTGTGCTCTGAAG s panTro5.chr4 192945163 16 + 194502333 TGTGTGTGCTCTGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828812 16 + 195804263 TGTGTGTGCTCTGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866031 16 + 4876863 TGAGTGTGCTCTGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757286 16 + 115148730 TGAGTGTGCTCTGAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041349 16 + 190429646 TGAGTGTGCTCTGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984234 16 + 189454096 TGAGTGTGCTCTGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375560 16 - 25927173 TGAGTGTGCTCTGAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405141 16 + 4669795 TGAGTGTGCTCTGAAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362035 16 + 135778131 TGAGTGTGCTCTGAAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825136 16 - 2847728 TGAGTGTGCTCTGAAG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189658176 16 - 190850796 TGAGTATGCTCTGAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150269 16 - 14256875 TGAGTGTGCTCTGAAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041417 16 - 2196201 TGAGTGTGCTCTGAAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429048 16 - 5030052 TGAGTGTGCTCTGAAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644585 16 - 129401213 CACGTGTGTTCTGAAT i mm10.chr8 I 2 C 0 s canFam3.chr16 16990490 16 - 59632846 TTGATATGGTCTGAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489678 16 - 2520184 GGAATGTGCCCTGAAG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544189 106 - 93316391 I e colAng1.NW_012116221v1 924743 1250 + 2368649 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=977980.000000 s hg38.chr4_KI270789v1_alt 158044 94 + 205944 CTATTTAGTAGCATCAGAAAGGTGGAGAATAAGTAGCTTATAAAACATTGACAGCTCTTCAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTA s panTro5.chr4 192945179 94 + 194502333 CTATTTAGTAGCATCAGAAAGGTGGAGAATAAGTAGCTTTTAAAACATTGACAGCTCTTCAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828828 94 + 195804263 CTATTTAGTAGCATCAGAAAGGTGGAGAATAAGTAGCTTATAAAACATTGACAGCTCTTCAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866047 94 + 4876863 CTATTTAGTAGCATCAGAAAGGTGGAGAATAAGTAGCTTATAAAACATTGACAGCTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757302 94 + 115148730 CTATTTAGTAGCATCAGAAAGGTGGAGAATAAGTAGTTTATAAAACACTGACAGCTCTTAAAATTGGACTAA---------------CAGGGAATCTCCAGGCA-TTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041365 94 + 190429646 CTATTTAGTAGCATTAGAAAGGCAGAGAATAAGTAGCTTATAAAACATTCACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984250 94 + 189454096 CTATTTAGTAGCATTAGAAAGGCAGATAATAAGTAGCTTATAAAACATTCACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375576 94 - 25927173 CTATTTAGTAGCATTAGAAAGGCAGAGAATAAGTAGCTTATAAAACATTCACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405157 94 + 4669795 CTATTTAGTAGCATTAGAAAGGCAGAGAATAAGTAGCTTATAAAACATTCACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362051 94 + 135778131 CTATTTAGTAGCA-TAGAAAGGCAGAGAATAAGTAGCTTATAAAACATTGACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCATTTTTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825152 94 - 2847728 CTATTTAGTAGCATTAGAAAGGCAGAGAATAAGTAGCTTATAAAACATTCACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 925993 94 + 2368649 CTATTTAGTAGCATTAGAAAGGCAGAGAATAAGTAGCCTATAAAACATTGACAACTCTTAAAATTGGACTAA---------------CAGGAAATCTCCAGGCA-TTTTG i colAng1.NW_012116221v1 I 1250 C 0 s calJac3.chr3 189658192 93 - 190850796 CTATTCAGGAGCAATAGAAAGGCAGAGAATCAGTAG-TTATAAAACACTGACAGCTCTTAAAACTGGACTAA---------------CAAGAACTCTCAAGCCA-TTTTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150285 108 - 14256875 CTATTTAGTAGCATTAGAAAGGCAGAAAATCAGTAG-TTGTAAAACATTGACAGCTCTTAAAACTGGGCTAACAGAAACTCTCAAGCCAGGAACTCTCAAGCCA-TTTTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041433 93 - 2196201 CTATTTAGTAGCGTTAGAAAGGCAGAGAATCAGTAG-TTATAAAACACTGACAACTCTTAAAATTGGACTAA---------------CAGGAACTCTCAAGCCA-TTTTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429064 93 - 5030052 CTATTTAGTAGCATTAGAAAGGCAGAGAATCAGTAG-TTATAAAACATTGACGACTCTTAAAATTGGACTAA---------------CAGGAACTCTCAAGCCA-TTTTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644601 86 - 129401213 CTATTCCACAGCAGTGGAAAGGTTGA----CACTGGTTTACAACACATTGATAACCTTGAAAACTGGGTAAA---------------ACGGAAATCTCAAATCT-G---- i mm10.chr8 C 0 C 0 s canFam3.chr16 16990506 79 - 59632846 ATACTTAATCGCATCAGAAACGCAAAGAA----TAGCTCACAAAATACTGACAACTCTTAATATTGGACTAA---------------AAGGCAATCTC------------ i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489694 80 - 2520184 GCACTTTATAGCATT--------------TATACAGTTTAAAACACATCGACACTCCTAAAAATTGAACTAA---------------AAGGTGATCTCAAACCA-TTCTG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544189 106 - 93316391 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=455157.000000 s hg38.chr4_KI270789v1_alt 158138 36 + 205944 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATTT s panTro5.chr4 192945273 36 + 194502333 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828922 36 + 195804263 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866141 36 + 4876863 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757396 36 + 115148730 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGAATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041459 36 + 190429646 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984344 36 + 189454096 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375670 36 - 25927173 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405251 36 + 4669795 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362145 36 + 135778131 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825246 36 - 2847728 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926087 36 + 2368649 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAACATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189658285 36 - 190850796 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150393 37 - 14256875 TTCATAATTTT-GGAAAAAAAT-GCAGTAACAAAGATCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041526 36 - 2196201 TTCATAATTTT-GG-AAGAAAT-GCAATAACAAAGATCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429157 36 - 5030052 TTCATAATTTT-GG-AAGAAAA-GGAATAACAAAGATCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544295 36 - 93316391 TTCATAATTTT-GG-GAGAAAT-ACAATAATAAAGATTT i micMur3.chr14 I 106 I 451 s mm10.chr8 86644687 38 - 129401213 TGTAGGATTCGAGG-AAAAAATAGCAATAATAAAGATTT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1489774 35 - 2520184 TCCATAATTG--GG-GAGAAAT-GCAATAACAAGGATTC i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16990585 0 - 59632846 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=185738.000000 s hg38.chr4_KI270789v1_alt 158174 23 + 205944 AATGGGTCCCATATTGTGAAACA s panTro5.chr4 192945309 23 + 194502333 AATGGGTCCCATATTGTGAAACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828958 23 + 195804263 AATGGGTCCCATATTGTGAAACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866177 23 + 4876863 AATGGGTCCCATATTGTGAAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757432 23 + 115148730 AATGGGTCCCATATTGTGAAACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041495 23 + 190429646 AATAGATCACATCCTGTGAAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984380 23 + 189454096 AATAGATCACATCCTGTGAAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375706 23 - 25927173 AATAGATCACATCCTGTGAAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405287 23 + 4669795 AATAGATCACATCCTGTGAAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362181 23 + 135778131 AATAGATCACATCCTGTGAAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825282 23 - 2847728 AATAGATCACATCCTGTGAAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926123 23 + 2368649 AATAGATCACATCCTGTGAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189658321 23 - 190850796 CATGGGTCCTATACTGTGAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150430 23 - 14256875 CTTGGGTTCTATATTGCGAAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041562 23 - 2196201 CATGGGTCCTATATTGTGAAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429193 23 - 5030052 CATGGGTCCTGTATTGTGAAAAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644725 23 - 129401213 CTCAAGTCACCTATTCTCAAAAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16990585 5 - 59632846 ------------------AAACA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489809 23 - 2520184 CCTGGGCCACACATTCTCAAAAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544331 451 - 93316391 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=1026960.000000 s hg38.chr4_KI270789v1_alt 158197 104 + 205944 T--------AATTGATCTAGAATA--------AGTACTATTCTTATTCCTA--TAGACAATCATACTCTGAGATTTTGGTCAAGTATCAGTTGATTGTTAATTATCTACGTGTTTGAAATAT s panTro5.chr4 192945332 104 + 194502333 T--------AATTGATCTAGAATA--------AGTACTATTCTTATTCCTA--TAGACAATCATACTCTGAGATTTTGGTCAAGTATCAGTTGATTGTTAATTATCTACGTGTTTGAAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192828981 104 + 195804263 T--------AATTGATCTAGAATA--------AGTACTATTCTTATTCCTA--TAGACAATCATACTCTGAGATTTTGGTCAAGTATCAGTTTATTGTTAATTATCTACGTGTTTGAAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866200 104 + 4876863 T--------AATTGATCCAGAATA--------AGTACTATTCTTATTCCTA--TAGACAATCATACTCTGAGATTCTGGTCAGGTATCAGTTGATTGTTAATTATCTACGTGTTTGAAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757455 104 + 115148730 T--------AATTGATCTAGAATA--------AGTACTATTCTTATTCCTA--TAGACAATCATACTCTGAGATTTTGGTCAGGTATCAGTTGATTGTTAATTATCTATGTGTTCGAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041518 104 + 190429646 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTACTTATCAATGTATTTGAAATAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984403 104 + 189454096 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375729 104 - 25927173 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405310 104 + 4669795 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362204 104 + 135778131 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825305 104 - 2847728 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926146 104 + 2368649 T--------AATTGATCTAGAATA--------AATACTATTCTTATTCCTA--TAGACAATCACACATAGAGATTTTGGTCCGGTATCAGTTGAATGTTAATTATCAATGTATTTGAAATAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189658344 104 - 190850796 T--------AATTGAACTAGAATA--------GGTACAATTCTTAGTCCTG--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATGACCTACATATTTGAAATAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150453 104 - 14256875 T--------AATTGAACTAGAATA--------GGTACCATTCTTAGTCCTG--TAGAAAATCACGCTTAGAGATTTTGGTCAGGTATCAGTTGAATATTAATTATCTACATGTTTGAAATAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041585 104 - 2196201 T--------AATTGAACTAGAATA--------GGTACCATTCTTAGTCCTG--CAGAAAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCTACATGTTCGAAATAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429216 104 - 5030052 T--------AATTGAACTAGAATA--------GGTACCATTCTTAGTCCTG--TAGACAATCACACTTAGAGATTTTGGTCAGGTATCAGTTGAATGTTAATTATCTACATGTTTGAAATAT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644748 85 - 129401213 CCGTCTATGAACTGTTGTTGAATACTGCTTTGAATATTA-TCTTGTTTCTA--CTGACA------------------GGTCA-----CAGGTTA-----------CGAAGTCTTTGTAATAT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1489832 96 - 2520184 C--------AATTGGCCTATAGTA--------AGTACTATTCTTATTCCTAAGAAGTCAATCACA----GAGACTTCCATCAATTAAAAGTT------TAGCTATCCACATGTCTGTAAGAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544331 451 - 93316391 I e canFam3.chr16 16990590 0 - 59632846 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=3466678.000000 s hg38.chr4_KI270789v1_alt 158301 334 + 205944 ATGAAATTTAATAGAGAGGCCATA----AGTCACATCCAAGAAGTACTAAGAGAAAGCACCACTGCAAAATCTTGGTAAATTCA--GAAAATAATAACAAATCTCATAATGAAAT---AAATATTTTATTGGGATTATAAGACCTACCATCCAAAGAACCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATATGGGAAATATGACAGAAAG-CAATttctgcttttactt---cttttcttctttact---tcttTCCCTTAGTGTGTTTT---GCATGTGTGTTTGTGTTTCCTTGAATCGTTGCTTAATCCAAGAAGCTTTC--AATTGACATC--CCATGTCAGACGGGAATG s panTro5.chr4 192945436 334 + 194502333 ATGAAATTTAATAGAGAGGCCATA----AGTCACATCCAAGAAGTACTAAGAGAAAGCACCACTGCAAAATCTTGGTAAATTCG--GAAAACAATAACAAATCTCGTAATGAAAT---AAATATTTTATTGGGATTATAAGACCTACCATCCAAAGAACCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATATGGGAAATATGACAGAAAG-CAATttctgcttttactt---cttttcttctttact---tcttTCCCTTAGTGTGTTTT---GCATGTGTGTTTGTGTTTCCTTGAATCGTTGCTTAATCCAAGAAGCTTTC--AATTGACATC--CCATGTCAGACGGGAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829085 334 + 195804263 ATGAAATTTAATAGAGAGGCCATA----AGTCACATCCAAGAAGTACTAAGAGAAAGCACCACTGCAAAATCTTGGTAAATTCG--GAAAACAATAACAAATCTCGTAATGAAAT---AAATATTTTATTGGGATTATAAGACCTACCATCCAAAGAACCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATATGGGAAATATGACAGAAAG-CAATttctgcttttactt---cttttcttctttact---tcttTCCCTTAGTGTGTTTT---GCATGTGTGTTTGTGTTTCCTTGAATCGTTGCTTAATCCAAGAAGCTTTC--AATTGACATC--CCATGTCAGACGGGAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866304 334 + 4876863 ATGAAATTTAATAGAGAAGCCATA----AGTCACATCCAAGAAGTACTAAGAGAAAGCACCACTGCAAAATCTTGGTAAAGTCA--GAAAATAATAACAAATCTAATAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACCATCCAAAGAACCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATGTGGCAAATATGACAGAAAG-CAATttctgcttttactt---cttttcttctttact---tcttcCCCTTAGTGTGTTTT---GCATGTGTGTTTGTGTTTCCTTGAATCGTTGCTTAATCAAAGAAGCTTTC--AATTGACATC--CCATGTCAGACGGGAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757559 329 + 115148730 ATGAAATTTAATAGAGAGGCCATG----AGTCACATCCAAGAAGTAGTAAGAGAAAGCACCACTGCAGAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCATAGTGAAAT---AAA-----TATTGGGATTATAAGACCTACTATCCAAAGAACCGTTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATATGGGAAATATGACAGAAAG-CAATttctgcttttactt---cttttcttctctact---tcttTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTTTTTCCTTGAATCGTTGCTTAATCCAAGAAGCTTTC--AATTGACATC--CCATGGCAGATGGGAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041622 335 + 190429646 ATGAAATTTAATAAAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCATTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTCATTAATTTATATGGGAAATATGACAGAAAAGCAATTTCTGCTCTTACTT---CTTTTCTTTTTTACT---TCTTTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACCGACATC--CCATGTCAGACGGGAATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984507 335 + 189454096 ATGAAATTTAATAAAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCATTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTAATTAATTTATATGGGAAATATGACAGAAAAGCAATTTCTGCTCTTACTT---CTTTTCTTTTTTACT---TCTTTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGTCAGACGGGAATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24375833 335 - 25927173 ATGAAATTTAATAAAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCATTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTCATTAATTTATATGGGAAATATGACAGAAAAGCAATTTCTGCTCTTACTT---CTTTTCTTTTTTACT---TCTTTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGTCAGACGGGAATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405414 331 + 4669795 ATGAAATTTAATAAAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCATTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTCATTAATTTATATGGGAAATATGACAGAAAAGCAATttctgct----ctt---cttttcttctttact---tcttTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGTCAGACGGAAATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362308 334 + 135778131 ATGAAATTTAATAAAGAGGCCGTA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCACTGCAAAATCTTGGTAAATGTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTCATTAATTTATATGGGAAATATGACAGAAAA-CAATTTCTGCTCTTACTT---CTTTTCTTCTTTACT---TCTTTCCCTTAGTGTGTTTT---GCACCTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGTCAGATGGGAATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825409 335 - 2847728 ATGAAATTTAATAAAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCATTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCGTAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----GCTCATTAATTTATATGGGAAATATGACAGAAAAGCAATTTCTGCTCTTACTT---CTTTTCTTCTTTACT---TCTTTCCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCTTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGTCAGACGGGAATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926250 334 + 2368649 ATGAAATTTAATAGAGAGGCCATA----AGTCACATTCAAGAAGCAGCAAGAGAAAGCACCACTGCAAAATCTTGGTAAATTTG--GAAAATAATAACAAATCTCATAGTGAAAT---AAATATTTTATTGGGATTATAAGACCTACTATCCAAAGATCCATTAG----GAA------CTTTA---------------------------------CA-----------ATA-----ACTCATTAATTTATATGGGAAATATGACAGAAAG-CAATTTCTGCTCTTACTT---CTTTTCTTCTTTACT---TCTTTTCCTTAGTGTGTTTT---GCACGTGTGTTTGTGTTTCCTTGAATCGTTGCTTAATCCAATAAGCTTTC--AACTGACATC--CCATGCCAGACAGGAATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189658448 341 - 190850796 AAGAAATTTAATAGAGAGGCCATAAACAAGTCATGTTCAAGAAGTAGCAAGAGAAAGCAGCACTGCAAAATCTCGGTAAATTCT--GAAAATAGTAACAGATCTCATAGTGAAAT---AAAGACTTTATTGGAATTATGAGACTTACTATCCAAAGAAGGATTAG----GCA------CTCTA---------------------------------CA-----------GTA-----ACTGATTAATTTATGTGGGAAATA----GAAAAATCCATTGCTGCTGTTCCTTTGCTTTTGCTTCGTTTCTTC-TCTTTCCCTTAGTTTGTTTT--CACACGTGTGTTTGTGTTTCCTTGAATACTGGCTGAATCCAGTAAGCTTTC--AGTTGACATC--ACGTGTCAGACAAGAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150557 341 - 14256875 ATGAAATTTAATAGAGAGACCATAAACAAGTCATGTTCAAGAAGTAGCAAGAGAAAACACCATTGCAAAATCTTAGTAAATTTT--GAAAATAATAACAAATCTCATAGTGAAAT---AAATATTTTATTGGAATTATAAGACTTCCTATCCAAAGAACCATTAG----GCA------CTTTA---------------------------------CA-----------ATA-----ACTGATTAATTTATGTGGGAAATA----GAAACG-CAATTTCTGCTTTTACCCTGCTTTTGCTTCTTTTCTTCTTCTTTCCCTCAGTGTGTTTT--CACATGTGTGTTTGTGTTTCCTTGAATAGTCGCTTAATCCAATAAGCTTTC--AATTGACATC--ACAGGTCAGACAAGAATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1041689 337 - 2196201 ATGAAATTTAAT--AGAAGCCATAAACGAACCATGTTCAAGAAGTAGCAAGAGAAAGCACCACTGCAAAATCTTGGTAAATTTT--GAAAATAATAATAAATCTCATAGTGAAAT---AAATATTTTATTGGAATTATAAGACTTACTATCCAAAGAACCATTAG----GCA------CTTGA---------------------------------CA-----------ATA-----ACTGATAAATTTACGTGGGAAGTA----GAAAAAGCAATTTCTGCTTTTACTCTGCTTTTGCTTCTTTTCT---TCTTTCCCTTAGTGTGTTTT--CACATGTGTGTTTGTGTTTCCTTGAATAGTTGCTTAATCCAATAAGCTTTC--AGTTGACATC--ACATGTCAGACAAGAATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429320 341 - 5030052 ATGAAATTTAATGGAGAGGCCATAAACAAGTCATCTTCAAGAAGTAGCAAGAGAAAGCA-CACTGCAAAATCTTGGTAAATTTT--GAAAATCATAACAAATCTCATAGTGAAAT---AAATATTTTATTGGAATTATAAGACTTACTATCCAAAGAACCATTAG----GCA------CTTTA---------------------------------CA-----------ATA-----ACTGATTAATTTATATGGGAAATA----GAAAAAGCAATTTCTGCTTTTTCTCTGCTTTTGCTTCTTTTCTTCTTCTTTCCCTTAGTATGTTTT--CACATGTGTGTTTGTGTTTCCTTGAATAGTCGCTTAATCCAATAGGCTTTC--AATTGACATC--ACGTGTCCGACAAGAATG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86644833 324 - 129401213 ATGGAAGATAACAGAGAGGCTACAAGTAAATCACATT-AAGAAGCAGGAAGAGGAAACACCACTTTAATATCTTGATACATTGT--TTAAATGGT-----ATGTAAAAATGAAAT---CACTGT--TATTTGAATGTTTAGACACATTTCCATAAGAACCATTAGCCTCCAA------CTATC---------------------------------CA-----------AAAAGAGGACGGCATAATTCATATGGAGAATAATACAGGAGC-CAGTGTCT-------CTA------------TTTGCT---TACTTTCCTCAACTTATTT----ACTTAACTGCTTATGTGTCCACACACAGTTGAGTAATCCAATGAACTTTC--CATTGTTATCTGCAACCCCACTCCAGAACA i mm10.chr8 C 0 C 0 s canFam3.chr16 16990590 327 - 59632846 ATGAAATTTAATAGAGGGGCCTTGAAGAAGTCACATTTAAGAAG----AAGATAAAGCCCCACAGTAAAA-CTTGG-AGTTTGT--TAAAATAACAGCAAATAGAAAAAGGAAGT---AAATATTTCATTTGAATTTTAAGATCTATTTTCCCAAGACCCATTGG----CAA------CACGG---------------------------------CAAGTATAAATTGAGA-----ACTGAGTAATTTATATGGGAAATATGATAGAAAA----TTTCTACTTTCACTA---------------------TCTTTTCACTAAGTAGATTT---ATAACAATATGTGTATATCCATGAAGAGTTTCTTAAGTCAATAAGCTTTCCTATCTGACATC--CCATGTCAGATAGGAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1489928 360 - 2520184 GTGCAACCTAAC----AGGCTATGAAGAGAGCACATTTAAGAGGCAGCAAGATAAAGTAAAATTGCAAAATCTTGGCACATTTGTTAAAAATAATCACA----TAATGGGAAAATGTGGACAATTTCATTTGAATTTTAAGAACTATTTTCCCAAGAACCTCTAG----TAAAATATTCCTTATTTTAATTAATCATTAGTAATTAAAGCGTAAAGTG-----------AAA-----ACTGATTAAATTACAGGGGAACTATGACAGAA---TTAATTCTACTTTTCCTC---------------------GTCTTTCCTCAGCATATCTAAGAAGACGTGTGTCTGTGCTTCCATGAATAGTTGCTGAATCTAATAAACTTTC--TGTTGCCTTC--CCACATTGGATAGGAACA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17544331 451 - 93316391 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=869712.000000 s hg38.chr4_KI270789v1_alt 158635 87 + 205944 CCACTGTATCACTTATTGATTTCAACAGTGGTAGTTTACT----CCTGGAAACTAAAACCATTAGGTG-TTTCTAAAATGTATG--------------cacacaca- s panTro5.chr4 192945770 101 + 194502333 CCACTGTATCACTTATTGATTTCAACAGTGTTAGTTTACT----CCTGGAAACTAAAACCGTTAGGTG-TTTCTAAAATGTATGcacacacacacacacacacaca- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829419 101 + 195804263 CCACTGTATCACTTATTGATTTCAACAGTGTTAGTTTACT----CCTGGAAACTAAAACCGTTAGGTG-TTTCTAAAATGTATGcacacacacacacacacacaca- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866638 93 + 4876863 CCACTGTATCACTTATTGATTTCAACAGTGTTAGTTTACT----CCTGGAAACTAAAACCGATAGGTG-TTTCTAAAATGTATG--------cacacacacacaca- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112757888 89 + 115148730 CCACTGTATCACTTATTGATTTCAACAGTGTTAGTTTACT----CCTGGAAACTAAAACCGATAGGTG-TTTCTAAAATGTATG------------cacacacaca- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189041957 91 + 190429646 CCACAGTATCACTTACTGATTTCCACAGCGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAGGTGTATGCAG----------acacacaca- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187984842 91 + 189454096 CCACAGTATCACTTACTGATTTCCACAGCGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAGGTGTATGCAG----------acacacaca- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376168 97 - 25927173 CCACAGTATCACTTACTGATTTCCACAGCGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAGGTGTATGCAG----acacacacacacaca- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3405745 95 + 4669795 CCACAGTATCACTTACTGATTTCCACAGCGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAGGTGTATGCAG------acacacacacaca- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362642 87 + 135778131 CCGCTGTATCACTTACTGATTTCCACAGTGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAAGTGTATGcag--------------acaca- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2825744 99 - 2847728 CCACAGTATCACTTACTGATTTCCACAGCGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTAAGGTGTATGCAG--acacacacacacacaca- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926584 95 + 2368649 CCGCTGTATCACTTACTGATTTCCACAGTGTTAGTTTACT----CCTGGAAACTAAAACCAATAGGTG-TTTCTACAGTGTATGcac------acacgcacacaca- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189658789 81 - 190850796 CCTCTGAATCACTTACTGATTTCAACAGT-TTAG-TTACG----TCCAGAAACTAAAACCAACGTGTG-TTTCTAAAATTTATG------------------CACA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13150898 82 - 14256875 CCACTGTATCACTTACTGATTTCAACATT-TTAGTTTACT----TCCGGAAACTAAAACCAGTGTGCG-TTTCTAAAAAGTATG------------------CACA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042026 80 - 2196201 TCATTGTATCACTTACTGATTTCAACGGT-TTAGTTTACT----TCCAGAAACTAAAACCAA--TGTG-TTTCTAAAATTTACG------------------CACA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429661 80 - 5030052 CC--CGTGTCACTTACTGATTTCAACAGT-TTAGTTTACT----TCCGGAAACTAAAACCAATGTGTG-TTTCTAAAATTTATG------------------CACA- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17544782 87 - 93316391 CCATTGTACCGCTCATTGATTTCACCAGTGTTAATTTACT----CCTAGAAACTAAAACCAATAGATG-TAACTAAAATTTATG--------------TACACACA- i micMur3.chr14 I 451 I 5 s mm10.chr8 86645157 88 - 129401213 GCATTCCACAATTTGTTTATTGTGCCTGC-TGAGTTTTCTGATGCCCAGAAACCAAAATAAATAGAGGATATTTAAAA---ATG--------------CAGTCACA- i mm10.chr8 C 0 C 0 s canFam3.chr16 16990917 89 - 59632846 CCACTGTATTACTTACTGATTTCACCAGCATAAGCTTTTT----CCTAGAATCCAAAACCAATAGATG-TTACTAAATTTTACA------------CATATGCATA- i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1490288 84 - 2520184 TCTTGGTATGATTTAATGATTTCACCAGTGTGAATTTACT----CCCTGAAGCTAAGGCCAATGGATG-TTACTAAAAATCATA------------------CACAC i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11278803 149 - 11315646 I a score=186437.000000 s hg38.chr4_KI270789v1_alt 158722 20 + 205944 cacac---acacacaaacaGAGT s panTro5.chr4 192945871 20 + 194502333 cacac---acacacacacaGAGT i panTro5.chr4 C 0 I 3 s panPan2.chr4 192829520 20 + 195804263 cgcac---acacacacacaGAGT i panPan2.chr4 C 0 I 3 s gorGor5.CYUI01015356v1 3866731 20 + 4876863 cacac---acacacacacaGAGT i gorGor5.CYUI01015356v1 C 0 I 3 s nomLeu3.chr7b 112757977 20 + 115148730 cacac---gcacacacacaGAGT i nomLeu3.chr7b C 0 I 3 s rheMac8.chr5 189042048 20 + 190429646 cacac---acacacacacaGAGT i rheMac8.chr5 C 0 I 3 s macFas5.chr5 187984933 20 + 189454096 cacac---acacacacacaGAGT i macFas5.chr5 C 0 I 3 s macNem1.NW_012013133v1 24376265 20 - 25927173 cacac---acacacacacaGAGT i macNem1.NW_012013133v1 C 0 I 3 s cerAty1.NW_012001672v1 3405840 20 + 4669795 cacac---acacacacacaGAGT i cerAty1.NW_012001672v1 C 0 I 3 s chlSab2.chr7 134362729 20 + 135778131 catac---acacacacacaGAGT i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012102221v1 2825843 20 - 2847728 cacac---acacacacacaGAGT i manLeu1.NW_012102221v1 C 0 I 3 s colAng1.NW_012116221v1 926679 19 + 2368649 cacac---ac-cacacacaGAGT i colAng1.NW_012116221v1 C 0 I 3 s calJac3.chr3 189658870 18 - 190850796 TGCAC---A--CACACACGGAGT i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13150980 20 - 14256875 TGCAC---ACGCACACACAGAGT i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 1042106 20 - 2196201 TGCAC---ACACACATACAGAGT i cebCap1.NW_016107886v1 C 0 I 3 s aotNan1.NW_018492112v1 3429741 18 - 5030052 TGCAC---A--CACACACAGAGT i aotNan1.NW_018492112v1 C 0 I 3 s mm10.chr8 86645245 21 - 129401213 --TACCTGATACATGGAGAGAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16991008 20 - 59632846 CATGC---ATGCACATACAGAGT i canFam3.chr16 I 2 I 3 s dasNov3.JH570353 1490372 3 - 2520184 --------------------AGT i dasNov3.JH570353 C 0 I 3 e micMur3.chr14 17544869 5 - 93316391 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=2676724.000000 s hg38.chr4_KI270789v1_alt 158742 224 + 205944 TTAAGGGTT-AAGTATTTATCTTCCTCCCTGTATTTTTCAGAAGAAAGAAGAAAAGGAGGATATGCTTCTGTACTAGAGACTACTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAATAAAT------GCCTTGGTGAAAATTACTGAAGTGGTGCTACAAAATTGCCTTGTCTTATTTTTGAGGACATGTGGAAAGCC-T-TTCTACAACT---TTTAGA--- s panTro5.chr4 192945894 224 + 194502333 TTAAGGGTC-AAGTATTTATCTTCCTACCTGTATTTTTCAGAAGAAAGAAGAAAAGGAGGATATGCTTATGTACTAGAGACTACTCTTTATTAGAAAAGCACAGGAAAAATTCTCAACCTGAATATTTTCAATAAGT------GCCTTGGTGAAAATTACTGAAGTGGTGCTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAGCC-T-TTCTACAACT---TTTAGA--- i panTro5.chr4 I 3 C 0 s panPan2.chr4 192829543 224 + 195804263 TTAAGGGTC-AAGTATTTATCTTCCTACCTGTATTTTTCAGAAGAAAGAAGAAAAGGAGGATATGCTTATGTACTAGAGACTACTCTTTATTAGAAAAGCACAGGAAAAATTCTCAACCTGAATATTTTCAATAAGT------GCCTTGGTGAAAATTACTGAAGTGGTGCTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAGCC-T-TTCTACAACT---TTTAGA--- i panPan2.chr4 I 3 C 0 s gorGor5.CYUI01015356v1 3866754 224 + 4876863 TTAAGGGTC-AAGTATTTATCTTCCTACCTCTATTTTTCAGAAGAAAGAAGAAAAGGAGGGTATGCTTATGTACTAGAGACTGCTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAATAAAT------GCCTTGGTGAAAATTACTGAAGTGGGTCTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAGCC-T-TTCTACAACT---TTTAGA--- i gorGor5.CYUI01015356v1 I 3 C 0 s nomLeu3.chr7b 112758000 224 + 115148730 TTAAGGGTC-AAGTATTTATCTTCCTACCTGTATTTTTCAGAAGAAAGAAGAAAATAAGGATATGCTTATGTACTAGAGACTACTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAATAAGT------GCCTTGGTGAAAATTACTGAAGTGGTTCTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAGCC-T-TTCTACAACT---TTTAGA--- i nomLeu3.chr7b I 3 C 0 s rheMac8.chr5 189042071 211 + 190429646 TTAAGGGTC----------TCTTCCTGCCTATATTTTTCAG----AAGAAGAAAAGAAGGATACACTTATGTACTAGGGACTACTGTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCGTGGTGAAAATTACTGAAGTGGTTCTGCAAAATCGCCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i rheMac8.chr5 I 3 C 0 s macFas5.chr5 187984956 211 + 189454096 TTAAGGGTC----------TCTTCCTGCCTATATTTTTCAG----AAGAAGAAAAGAAGGATACACTTATGTACTAGGGACTACTGTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCGTGGTGAAAATTACTGAAGTGGTTCTGCAAAATCGCCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i macFas5.chr5 I 3 C 0 s macNem1.NW_012013133v1 24376288 211 - 25927173 TTAAGGGTC----------TCTTCCTGCCTATATTTTTCAG----AAGAAGAAAAGAAGGATACACTTATGTACTAGGGACTACTGTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCGTGGTGAAAATTACTGAAGTGGTTCTGCAAAATCGCCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i macNem1.NW_012013133v1 I 3 C 0 s cerAty1.NW_012001672v1 3405863 211 + 4669795 TTAAGGGTC----------TCTTCCTGCCTATATTTTTCAG----AAGAAGAAAAGAAGGATACACTTATGTACTAGGGACTACTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCATGGTGAAAATTACTGAAGTGGTTCTGCAAAATCGCCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i cerAty1.NW_012001672v1 I 3 C 0 s chlSab2.chr7 134362752 220 + 135778131 TTAAGGGTC-AAGTTTTTATCTTCCTACCTATATTTTTAAG----AAGAAGAAAAGAAGGATATACTTATGTACTAGGGACCACCCTCTATTAGAAAAGCACAGGAACAATTCTTAACCTGAATATTTTCAGGAAGT------GCCGTGGTGAAAATTACTGAAGTGGTTCTGCAAAATTGCCCTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012102221v1 2825866 211 - 2847728 TTAAGGGTC----------TCTTCCTGCCTATATTTTTCAG----AAGAAGAAAAGAAGGATACACTCATGTACTAGGGACTACTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCATGGTGAAAATTACTGAAGTGGTTCTGCAAAATCACCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i manLeu1.NW_012102221v1 I 3 C 0 s colAng1.NW_012116221v1 926701 220 + 2368649 TTAAGGGTC-AAATTTTTATCTTCCTACCTATATTTTTCAG----AAGAAGAAAAGAAGGATGCACTTATGTACTAGGAACTACTCTTTATTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCGTGGTGAAAATTACTGAAGTGGTTCTGCAAAATGGCCTTGTCCTATTTTTGAGGACCTGTGGAAAGCC-C-TTCTACAACT---TTTAAA--- i colAng1.NW_012116221v1 I 3 C 0 s calJac3.chr3 189658891 224 - 190850796 TTGAGGGTC-AAGTGTTCATCTCCCTACCTATATTTTTCAGAAGAAAGAAGAAAGGAAGGATACGCTCATGTACTTGAGACTAGTCTTTGTTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCTTCCTGAAAGTTACTGAAGTGGTTCTACAAAATTGCCTTGTCCTGTTTTTGAGGACATGTGGAAAGGC-T-TTCTGCAACT---TTTAAA--- i calJac3.chr3 I 3 C 0 s saiBol1.JH378165 13151003 224 - 14256875 TTGAGGGTC-AAGTATTTGTCTTTCTACCTATATTTTTCAGAAGAAAGAAGAAAGGAAGGATATGCTCATGTCCTTGAGACTACTGTTTGTTAGAAAAGCACAGGAACGATTCTCAACCTGAATATTTTCAATAAGT------GCCTTGCTGAAAATGACTGAAGTGGTTCTACAAAACTGTCTTGTCCTATTTTTGAGGACATGTGGAAAGGC-T-TTCTGCAACT---TTTAAA--- i saiBol1.JH378165 I 3 C 0 s cebCap1.NW_016107886v1 1042129 224 - 2196201 TTGAAGGTC-AAGTATTTATCTTCCTATCTATATTTTTCAGAGGAAAGAAGAAAGGAAGGATATGCTCATGTACTTGAGACTACTCTTTGTTAGAAAAGCACAGGAACAATTCTCAACCTGATTATTTTCAATAAGT------GCCTTGCTGAAAACTACTGAAGTGCCTTTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAAGC-T-TTCTGCAACT---TTTAAA--- i cebCap1.NW_016107886v1 I 3 C 0 s aotNan1.NW_018492112v1 3429762 224 - 5030052 TTGAGGGTC-AAGTATTTATCTTCCTACCTATATTTTTCCGAAGAAAGAAGAAAGGAAGCATATGCTCATGTACTTGAGGCTACTCTTTGTTAGAAAAGCACAGGAACAATTCTCAACCTGAATATTTTCAGTAAGT------GCCTTGCTGAAAATTACTGAAGTGATTCTACAAAATTGCCTTGTCCTATTTTTGAGGACATGTGGAAAGGC-T-TTCTGCAACT---TTTAAA--- i aotNan1.NW_018492112v1 I 3 C 0 s micMur3.chr14 17544874 225 - 93316391 TTAAAGGTC-AAGTAATTACCTTTCTACCTACATTTTTCAGAAGAAAGAAGAAAAGAAAGTTGTGCTCAAGTACTGGAAACTACTCTTGATTAGAAAAGCAGAGAAATAATTCTCAACCTGAATATTTCCAAGAAGT------AAATTGCTGAAAATTAGTAAGGTGGTTCTACAAAATTGCCTTGTCTTATTTTTTAGGACACGTGGAAAGCCTT-TTCCACAACT---TTTTAA--- i micMur3.chr14 I 5 C 0 s mm10.chr8 86645266 215 - 129401213 TCAAAGGCCCAAGCAATTATTTT--------TATTTTTCAG--------ATATAAAGAATATATGTTCGTGAACTAAAAATTCACCTCTTTCAGAAAAACATAGATGCAATTCTTGACCTGGATATATTCAATTCTTATTTCAGCCTTGCTGAAAGTGTCTGAAGCATTTTTCCAAAATTGCCTTGCAATGTGTT---GGACAATGGGAACGCT-T-TTCTACATTTTTCTTTTTA--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16991031 216 - 59632846 TTAAAAATC-AACTATTTATCTTCCTACCTACAATTTTCAGGAGAAGAAAGAAAAGAAAGATGCACTCAAAGAC---AAATTATTATTTATCAGAAAAGCTTAAAGATAATTCTCAAACTGAATATTTCCAATAAGT------A-TTTGGTGAAAGTTACTGAGGTGATTCTATAAAATTGTCTTG-----GTTTTTAGAACACATAGAAAGTCAT-TTCCACAAAT---TTGAAA--- i canFam3.chr16 I 3 I 1652 s dasNov3.JH570353 1490378 220 - 2520184 TTAAGGATT-GAGTAATCATTTTCCTA-------TTTTCAGAGGAAGAAAGAACATCAAAATATATTCAGGAACAAGAAACTACTTTTTATCACAAAATCTTAGAAGTAATTGCCAACATGAATATTTCCGGTAC-T------GCCTTGCTAAAAATAACTCAGGTGGTTCTAAAAAATGGACTTGTTTTATTTTTGAGTTTATAAAGAAAGCC-TATTTTACAACT---TTTAAAAAA i dasNov3.JH570353 I 3 C 0 e otoGar3.GL873580 11278803 149 - 11315646 I a score=1287888.000000 s hg38.chr4_KI270789v1_alt 158966 108 + 205944 TATATGTAATAAAGCTGAACATTCTTCACATCATCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCTAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT s panTro5.chr4 192946118 108 + 194502333 TATATGTAATAAAGCTGAACATTCTTCACATCATCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCTAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829767 108 + 195804263 TATATGTAATAAAGCTGAACATTCTTCACATCATCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCTAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3866978 108 + 4876863 TATGTGTAATAAAGCTGAACATTCTTCACATCATCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCTAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758224 108 + 115148730 TATGTGTAATAAAGCTGAACATTCTTCACATCATCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCTAGCATTGGTTAGTTTG-AATGAATCGTCCTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042282 108 + 190429646 TAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATGGCCAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985167 108 + 189454096 TAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATGGCCAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376499 108 - 25927173 TAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATGGCCAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406074 108 + 4669795 TAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATTGCCAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134362972 108 + 135778131 TAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTGTTAGAGAGCTTCAAGTGTAATAGTGAA-----------ATCGCCAGCATTGGTTAGTTTG-AATGAATAGTCCTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2826077 108 - 2847728 CAAATGTAGTAAGTCTGAACATTCTGTACATCATCCAAAATTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCGCCAGCATTTGTTAGTTTG-AATGAATAGTGCTTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 926921 108 + 2368649 TAAATGTAGTTAATCTGAACATTCTGTACACCATCCAAACTTATTAGAGAGCTTAAAGTGTAGTAGTCAA-----------ATCGCCAGCATTGATTAGTTTG-AATGAATAGTCCTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659115 107 - 190850796 TATTTGCAATAAATCTGAACATTCTGCACATCACGCAAACTTATTAGAGAGCTTAAAGTGTAACAGTCAA-----------ATTGCAGGCATT-GTGAGTTTG-AATGAATAGTGATTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151227 107 - 14256875 TATTTGTAATAAATCTGAACATGCTGCATATCACCCAAACTTATTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATTGCTAGCATT-GTTAGTTTG-AATGAATAGTCCTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042353 104 - 2196201 TATTTGTAATAAATCTGAACATTCTGCATATCACCCAAAC---TTAGAGACCTTAAAGTATAATAGTCAA-----------ATTGCTAGCATT-GTTAGTTTG-AATGAATAGTCCTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3429986 103 - 5030052 TATTTGTAATAAATCTGAACATTCTGCATATCACCCAAACTTATTAGAGAGCTTAAAGTGTAACAGTCAA-----------ATTGCTAGCATT-----GTTTG-AATGAATAGTCCTTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545099 109 - 93316391 TATTCGTAACAAATTTGAACATACTGCATAGCATCCAAACTTACTAGAGAGCTTAAAGTGTAATAGTCAA-----------ATCTCTAGCATAGGTTAGTTTGAAATGAACAGTTCTCTT i micMur3.chr14 C 0 C 0 s mm10.chr8 86645481 105 - 129401213 GACCTGTTGTCAATCTGAGCATTCTG---AGTGTACAGGCTTCCAGGAGGGCTTAAGGTACAGCAGCCAA-----------GCCTCTAGCATAGGCTAGTTGG-AATGAATAGTTTTCTA i mm10.chr8 C 0 C 0 s canFam3.chr16 16992899 108 - 59632846 TATTTGCGATAAATTTGAATATACAACGTACCATCCAAATGTATTAGAGAGCTTAAAGTGTAGTAGTCAA-----------ACATCTAGCATAGATTAGTTTA-AATGAATAGCTCTCTT i canFam3.chr16 I 1652 C 0 s dasNov3.JH570353 1490598 97 - 2520184 TATTTGCAGTAAATCTGAACGTAGAGCATATCATTCAAAC---TTAGAGTTCTTGAACT----TATTAAATCTTGCCTGTTATCTCTAGAATGGGTTAATTTG-A--------------- i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11278803 149 - 11315646 I a score=17514.000000 s hg38.chr4_KI270789v1_alt 159074 5 + 205944 AAGAC s panTro5.chr4 192946226 5 + 194502333 AAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829875 5 + 195804263 AAGAC i panPan2.chr4 C 0 I 2 s gorGor5.CYUI01015356v1 3867086 5 + 4876863 AAGAC i gorGor5.CYUI01015356v1 C 0 I 5 s nomLeu3.chr7b 112758332 5 + 115148730 AAGAC i nomLeu3.chr7b C 0 I 2 s manLeu1.NW_012102221v1 2826185 5 - 2847728 AAGAC i manLeu1.NW_012102221v1 C 0 C 0 s aotNan1.NW_018492112v1 3430089 5 - 5030052 AAGAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545208 5 - 93316391 AAGAC i micMur3.chr14 C 0 C 0 s mm10.chr8 86645586 5 - 129401213 AAGCC i mm10.chr8 C 0 C 0 s canFam3.chr16 16993007 5 - 59632846 ATGAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e dasNov3.JH570353 1490695 0 - 2520184 C e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=3403.000000 s hg38.chr4_KI270789v1_alt 159079 2 + 205944 tt s panTro5.chr4 192946231 2 + 194502333 At i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829882 2 + 195804263 tt i panPan2.chr4 I 2 C 0 s gorGor5.CYUI01015356v1 3867096 2 + 4876863 tt i gorGor5.CYUI01015356v1 I 5 C 0 s nomLeu3.chr7b 112758339 2 + 115148730 tt i nomLeu3.chr7b I 2 C 0 s manLeu1.NW_012102221v1 2826190 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s aotNan1.NW_018492112v1 3430094 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 I 1 s micMur3.chr14 17545213 2 - 93316391 CT i micMur3.chr14 C 0 C 0 s mm10.chr8 86645591 2 - 129401213 CT i mm10.chr8 C 0 C 0 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e dasNov3.JH570353 1490695 0 - 2520184 C e canFam3.chr16 16993012 0 - 59632846 C e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=2548.000000 s hg38.chr4_KI270789v1_alt 159081 1 + 205944 t s panTro5.chr4 192946233 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829884 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867098 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758341 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s manLeu1.NW_012102221v1 2826192 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s micMur3.chr14 17545215 1 - 93316391 T i micMur3.chr14 C 0 C 0 s mm10.chr8 86645593 1 - 129401213 T i mm10.chr8 C 0 I 11 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e dasNov3.JH570353 1490695 0 - 2520184 C e canFam3.chr16 16993012 0 - 59632846 C e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=1911.000000 s hg38.chr4_KI270789v1_alt 159082 1 + 205944 t s panTro5.chr4 192946234 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829885 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867099 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758342 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s manLeu1.NW_012102221v1 2826193 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s micMur3.chr14 17545216 1 - 93316391 T i micMur3.chr14 C 0 C 0 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e dasNov3.JH570353 1490695 0 - 2520184 C e canFam3.chr16 16993012 0 - 59632846 C e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 159083 1 + 205944 t s panTro5.chr4 192946235 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829886 1 + 195804263 t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867100 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758343 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s micMur3.chr14 17545217 1 - 93316391 T i micMur3.chr14 C 0 I 177 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e dasNov3.JH570353 1490695 0 - 2520184 C e canFam3.chr16 16993012 0 - 59632846 C e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e manLeu1.NW_012102221v1 2826194 0 - 2847728 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=15880.000000 s hg38.chr4_KI270789v1_alt 159084 14 + 205944 ttttttttttgaga s panTro5.chr4 192946236 14 + 194502333 ttttttttttgaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829887 14 + 195804263 ttttttttttgaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867101 14 + 4876863 ttttttttttgaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758344 14 + 115148730 ttttttttttgaga i nomLeu3.chr7b C 0 C 0 s dasNov3.JH570353 1490695 12 - 2520184 --tttgttttagga i dasNov3.JH570353 C 0 I 112 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e micMur3.chr14 17545218 177 - 93316391 I e canFam3.chr16 16993012 0 - 59632846 C e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e manLeu1.NW_012102221v1 2826194 0 - 2847728 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=242007.000000 s hg38.chr4_KI270789v1_alt 159098 277 + 205944 tggagtctcgctctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaagctccacctcccgggttcatgccattctcctgcctcagcctctggagtagctgggaccacaggcacccaccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatcctcccacctccacgtcccaaagtgctgggattacaggcatgagccactgcgcccagcc s panTro5.chr4 192946250 277 + 194502333 cggagtctcgctctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccacttcccgggttcatgccattctcctgcctcagcctctggagtagctgggaccacaggcacccaccaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatcctcccgcctccacgtcccaaagtgctgggattacaggcatgagccactgcgcccggcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192829901 277 + 195804263 cggagtctcgctctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctccacttcccgggttcatgccattctcctgcctcagcctctggagtagctgggaccacaggcacccaccaccatgcctggctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatcctcccgcctccacgtcccaaagtgctgggattacaggcatgagccactgcgcccggcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867115 274 + 4876863 cggagtct--ctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccacctcccgggttcatgccattctcctgtctcagcctctggagtagctaggaccacaggcagccaccaccatgcctggctaa-tttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgattctcccgcctccacctcccaaagtgctgggattacaggcgtgagccactgcgcccagcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758358 273 + 115148730 cggagtct--cactgttgcccaggctggagtgcagtggcgcgatcttggctcactgcaagctctacctcctgggttcatgccattctcctgcctcagcctctggagtagctgggaccacaggcacccaccaccatgcctggctaattttttgta--tttagtagagacgaggtttcaccgtgttagcgagtatgatctcgatctcctgacctcgtgatcctcccacctccacctcccaaagtgctgggattacaggtgtgagccactgcgcccggtc i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189659222 0 - 190850796 C e cebCap1.NW_016107886v1 1042457 0 - 2196201 C e micMur3.chr14 17545218 177 - 93316391 I e dasNov3.JH570353 1490707 112 - 2520184 I e canFam3.chr16 16993012 0 - 59632846 C e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e saiBol1.JH378165 13151334 0 - 14256875 C e colAng1.NW_012116221v1 927029 0 + 2368649 C e manLeu1.NW_012102221v1 2826194 0 - 2847728 C e chlSab2.chr7 134363080 0 + 135778131 C e cerAty1.NW_012001672v1 3406182 0 + 4669795 C e macNem1.NW_012013133v1 24376607 0 - 25927173 C e macFas5.chr5 187985275 0 + 189454096 C e rheMac8.chr5 189042390 0 + 190429646 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=58019.000000 s hg38.chr4_KI270789v1_alt 159375 7 + 205944 AAGACTT s panTro5.chr4 192946527 7 + 194502333 AAGACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830178 7 + 195804263 AAGACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867389 7 + 4876863 AAGACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758631 7 + 115148730 AAGACTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042390 7 + 190429646 AAGACTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985275 7 + 189454096 AAGACTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376607 7 - 25927173 AAGACTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406182 7 + 4669795 AAGACTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363080 7 + 135778131 AAGACTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927029 7 + 2368649 AAGACTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659222 7 - 190850796 AAGACTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151334 7 - 14256875 AAGACCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042457 7 - 2196201 AAGACTT i cebCap1.NW_016107886v1 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I e dasNov3.JH570353 1490707 112 - 2520184 I e canFam3.chr16 16993012 0 - 59632846 C e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e manLeu1.NW_012102221v1 2826194 0 - 2847728 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=21840.000000 s hg38.chr4_KI270789v1_alt 159382 2 + 205944 TT s panTro5.chr4 192946534 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830185 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867396 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758638 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042397 2 + 190429646 TT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985282 2 + 189454096 TT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376614 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406189 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363087 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927036 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659229 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151341 2 - 14256875 TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042464 2 - 2196201 TT i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16993012 2 - 59632846 TT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490819 2 - 2520184 TT i dasNov3.JH570353 I 112 C 0 e micMur3.chr14 17545218 177 - 93316391 I e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e manLeu1.NW_012102221v1 2826194 0 - 2847728 C e otoGar3.GL873580 11278803 149 - 11315646 I a score=4266.000000 s hg38.chr4_KI270789v1_alt 159384 1 + 205944 T s panTro5.chr4 192946536 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830187 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867398 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758640 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042399 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985284 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376616 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406191 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363089 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2826194 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 927038 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659231 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151343 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042466 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 16993014 1 - 59632846 T i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490821 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I e mm10.chr8 86645594 11 - 129401213 I e aotNan1.NW_018492112v1 3430096 1 - 5030052 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=13923.000000 s hg38.chr4_KI270789v1_alt 159385 1 + 205944 A s panTro5.chr4 192946537 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830188 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867399 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758641 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042400 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985285 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376617 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406192 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363090 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2826195 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 927039 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659232 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151344 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042467 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430097 1 - 5030052 A i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 16993015 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490822 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I e mm10.chr8 86645594 11 - 129401213 I e otoGar3.GL873580 11278803 149 - 11315646 I a score=152057.000000 s hg38.chr4_KI270789v1_alt 159386 14 + 205944 -AAATGCTTCCTTCT s panTro5.chr4 192946538 14 + 194502333 -AAATGCTTCCTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830189 14 + 195804263 -AAATGCTTCCTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867400 14 + 4876863 -AAATGCTTCCTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758642 14 + 115148730 -AAATGCTTCCTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042401 14 + 190429646 -AGATGCTTCCTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985286 14 + 189454096 -AGATGCTTCCTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376618 14 - 25927173 -AGATGCTTCCTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406193 14 + 4669795 -AGATGCTTCCTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363091 14 + 135778131 -AGATGCTTCCTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2826196 14 - 2847728 -AGATGCTTCCTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 927040 14 + 2368649 -AGATGCTTCCTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659233 14 - 190850796 -AAATGCCTCGTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151345 14 - 14256875 -AAATGCCTCCTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042468 14 - 2196201 -AAATGCCTCCTTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430098 14 - 5030052 -AAATGCCTCCTTCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278952 13 - 11315646 -aaatGTGTCCTTC- i otoGar3.GL873580 I 149 C 0 s canFam3.chr16 16993016 14 - 59632846 -AAATTTGTACTTCT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490823 14 - 2520184 AAAAAAATTTGTTC- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I e mm10.chr8 86645594 11 - 129401213 I a score=720807.000000 s hg38.chr4_KI270789v1_alt 159400 72 + 205944 TCATGGATCTGGGCTCCTGAGTGAGTGTGCTGAGTGAATCATGCATGGTAGC--AGACACCTTTCGGAATCCGG s panTro5.chr4 192946552 72 + 194502333 TCATGGATCTGGGCTCCTGAGTGAGTGTGCTGAGTGAATCATGCATGGTAGC--AGACACCTTTCGGAATCCGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830203 72 + 195804263 TCATGGATCTGGGCTCCTGAGTGAGTGTGCTGAGTGAATCATGCATGGTAGC--AGACACCTTTCGGAATCCGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867414 72 + 4876863 TCATGGATCTGGGCTCCCGAGTGAGTGTGCTGAGTGAATCATGCTTGGTAGC--AGACACCTTTCGGAACCCGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758656 68 + 115148730 TCATGGATCTGGGCTCC----TGAGTGTGCCGAGTGAATCATGCATGGTAGC--AGACACCTTTCGGAACCTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042415 70 + 190429646 TCATAGGTCTGAGCTCC----TGAGCATGCTGAGTGGATCACGCAAGGTAGCAGAGACACTTTTCGGAACCCGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985300 70 + 189454096 TCATAGGTCTGAGCTCC----TGAGCGTGCTGAGTGGATCACGCAAGGTAGCAGAGACACTTTTCGGAACCCGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376632 70 - 25927173 TCATAGGTCTGAGCTCC----TGAGCGTGCTGAGTGGATCACGCAAGGTAGCAGAGACACTTTTCGGAACCCGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406207 70 + 4669795 TCATGGGTCTGAGCTCC----TGAGCGTGCTGAGTGGATCACGCAAGGTAACAGAGACACTTTTTGGAACCCGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363105 68 + 135778131 TCATGGGTCTGAGCTCC----TGAGCGTGCTGAGTGGATCACACAAGGTAGC--AGACACCTTTCGGAACCCGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2826210 70 - 2847728 TCATGGGTCTGAGCTCC----TGAGCGTGCTGAGTGGATCACGCAAGGTAGCAGAGACACTTTTCGGAACCCGG i manLeu1.NW_012102221v1 C 0 I 5851 s colAng1.NW_012116221v1 927054 68 + 2368649 TCATGGGTCTGAGCTCC----TGAGTGTGCTGAGTGGATCATGCAAGGTAGC--GGACACCTTTCAGAACCCGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659247 68 - 190850796 TCAGGGATCTGAGCTGC----TGAGTGTGCTGAGTGAATTACACACGGTAAC--AAACGCCTTTTGGAATCCGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151359 68 - 14256875 TCATGGATCTGAGCTCC----TGAGTATGCTGAGTGAATTATGCATAGTAAC--AAACACCTTTTGGAATCCGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042482 68 - 2196201 TCATGGATCTGAGCTCC----TGAGTGTGCTGAGTGAATTATGCATGGTAAC--AAACACCTTTTGGAATCTGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430112 68 - 5030052 TCATGGATCTGAGCTCT----TGAGTGTGCTGAGTGAATTATGCATGGTAAC--AAACACCTTTCGGAATCTGG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11278965 65 - 11315646 TCATGACTTTAAACTCT----CGAATGTTCTGAGTGAAGCATAAATGTTAAC--AAACGCTTTT-GAAATGC-- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86645605 68 - 129401213 TCATGAATCTGAGCTCC----TGAATGTACGACATGAAGCATGGATGCTAGT--GGATACTCTGCAAAACACCA i mm10.chr8 I 11 C 0 s canFam3.chr16 16993030 67 - 59632846 -CAGAGATCTGAACTCC----TAAATACGTAACATGAAGCATTAATGTTAGC--AAACATTTTTCAAAATAATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490837 67 - 2520184 TCAAGGTTCT-AACTCC----TAAATGTGCAGATTGAAATATAAGTGTTAAC--AAATATGATTCAAAATAATA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I a score=638465.000000 s hg38.chr4_KI270789v1_alt 159472 84 + 205944 CTTCAGTAG---ACGTGAGGGTAACTCCAGTGCTCAGAAAAGGTCCCTTAG-CAG---CTGGACTTGCTCAAGGTGACTGGATGCTCGTCA s panTro5.chr4 192946624 84 + 194502333 CTTCAGTAG---ACGTGAGGGTAACTCTAGTGCTCAGAAAAGGTCCCTTAG-CAG---CTGGCCTTGCTCAGGGTGACTGGATGCTCGTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830275 84 + 195804263 CTTCAGTAG---ACGTGAGGGTAACTCTAGTGCTCAGAAAAGGTCCCTTAG-CAG---CTGGCCTTGCTCAGGGTGACTGGATGCTCGTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867486 84 + 4876863 CTTCAGTAG---ACGTGAGGGTAACTCTAGTGCTCAGAAAAGGTCCCTTAG-CAG---CTGGCCTTGCTCAGGGTGACTGGATGCTCGTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758724 84 + 115148730 CTTCAGTAG---ACGTGAGGGTAACTCTAGTGCTCAGAAAAGGTCCCTTAG-CGG---CTGGCCTTGCTCAGGGTGACTGGATGCTCGTCG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042485 84 + 190429646 GACCCGTGG---ACGTGAGTGTGACTCTGGTGCTCAGATAAGGTCCCTTAG-CAG---CTGGCCTGGCTCGAGGTGACTGGATGCTCTTCG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985370 84 + 189454096 GACCCGTGG---ACGTAAGTGTGACTCTGGTGCTCAGATAAGGTCCCTTAG-CAG---CTGGCCTGGCTCGAGGTGACTGGATGCTCTTCG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376702 84 - 25927173 GACCCGTGG---ACGTGAGTGTGACTCTGGTGCTCAGATAAGGTCCCTTAG-CAG---CTGGCCTGGCTCGAGGTGACTGGATGCTCTTTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406277 84 + 4669795 GACCCGTGG---ACGTGAGTGTGACTCTGGTGCTCAGATAAGGTCCCTTAG-CAG---CTGGCCTGGCTCGAGGTGACTGGATGCTCTTCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363173 83 + 135778131 GACCCGTGG---ACGTGAGTGTGACTCTGGTGCTCAGATAAGATCCCTTAG-CAG---CTGGCCTGGCTCGAGGTGACTGGATGGTCTTC- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927122 81 + 2368649 GTCCCATAG---ACGTGAGGGTAAATC--GTGCTCAGATAAGGTCCCTTAG-CAG---CTGGCCTTGCTCGAGGTGACTGGATGCTCTTC- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659315 87 - 190850796 TTTCAGTAG---ACTTGGGGGTGAACCTACTGCTCAGAAAAGGTCCCTTAG-CAGCTGCAGGCCTTGCTCTGGGTGACTGGATGCTCTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151427 87 - 14256875 TTTCAGTAG---ACTTGAGGGTAAATCTACTGCTCAGAAAAGATCCCTTAG-CAGGTGCTGGCCTTGCTCTGGGTGACTGGATGCTCTTCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042550 87 - 2196201 TTTCAGTAG---CCTTGAGGGCAAATCTACTGCTCAGAAAAGATCCCTTAG-CAGCTACTGGTCTTGCTCTGGGTGACTGGATGCTCTTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430180 87 - 5030052 TTTCAGTAG---ACTTGAGGGTAAATCTACTGCTCAGAAAAGATCCCTTAG-CAGCTGCTGGCCTTGCTCTGGGTGACTGGATGCTCTTCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279030 65 - 11315646 ---------------TGTGGCCAA-------GCTCCGTGAGCAGCCTATGG-CAG---CTGGCTCTGCTCCCGGTTAGTGGACGCTTTTCC i otoGar3.GL873580 C 0 I 4 s mm10.chr8 86645673 84 - 129401213 TCGCAATAGGTTACAGAAGAGCGACCT---TGCTCATAGCTAGTCTCTTTA-CAG---CTGGTTACACTCCCTGTTCCTTGATGCTCTTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16993097 69 - 59632846 TTTAAGTAG---ATTCTAGAATAACCATAATGCTCAGAAATGGTCCCTTTT-CAG------------------GTTATTTCAAGCTTTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490904 61 - 2520184 TTTTAGTGG---GTTCTAAAATAGTTACAATGCTCAGAAATGGTTATTTAATCCT---CTGACTTTG------------------------ i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545218 177 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=12907.000000 s hg38.chr4_KI270789v1_alt 159556 1 + 205944 T s panTro5.chr4 192946708 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830359 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867570 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758808 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042569 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985454 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376786 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406361 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363256 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927203 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659402 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13151514 1 - 14256875 T i saiBol1.JH378165 C 0 I 684 s cebCap1.NW_016107886v1 1042637 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430267 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545395 1 - 93316391 T i micMur3.chr14 I 177 C 0 s otoGar3.GL873580 11279099 1 - 11315646 T i otoGar3.GL873580 I 4 C 0 s mm10.chr8 86645757 1 - 129401213 C i mm10.chr8 C 0 C 0 s canFam3.chr16 16993166 1 - 59632846 C i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490965 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=2040385.000000 s hg38.chr4_KI270789v1_alt 159557 166 + 205944 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGA-TTTATTGCTG--TCTTGCTCACAA-GCCAGGAGCACACTTCTGAAGTTGCCAAGAGT--------GTGAAAAAGC---------AGATATCCAAATTGTGAA-GTGAGTGGTTTCC-T-ACATTAACTCGAATTGATTTT s panTro5.chr4 192946709 166 + 194502333 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGA-TTTATTGCTG--TCTTGCTCACAA-GCCAGGAGCACACTTCTGAAGTTGCCAAGAGT--------GTGAAAAAGC---------AGATATCCAAATTGTGAA-GTGAGTGGTTTCC-T-ACATTAACTCGAATTGATTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830360 166 + 195804263 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGA-TTTATTGCTG--TCTTGCTCACAA-GCCAGGAGCACACTTCTGAAGTTGCCAAGAGT--------GTGAAAAAGC---------AGATATCCAAATTGTGAA-GTGAGTGGTTTCC-T-ACATTAACTCGAATTGATTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867571 166 + 4876863 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGA-TTTATTGCTG--TCTTGCTCACAA-GCCAGGAGCACACTTCTGAAGTTGCCAACAGT--------GTAAAAAAGC---------AGACATCCCAATTGTGAA-GTGAGTGGTTTCC-T-ACATTAACTCGAATTGGTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758809 166 + 115148730 AAGATTTCCAGG-TTGGGTCTGAGGTATGTCAAGTACTAGT--TGGAATTGA-TTTATTGCTG--TCTTGCTCACAA-GCCAGGAGCACACTTCTGAAGTTGCCAACAGT--------GTAAAAAGGC---------AGATATCCAAGTTGTGAA-GTGAGTGGTTTCC-T-ACATTAACTCGAATTGATTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042570 169 + 190429646 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACCAGGAGCATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAGATTTTGAAGGTGAGTGATTTCCTT-CCATTAACTCAAATTGATTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985455 169 + 189454096 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACCAGGAGCATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAGATTTTGAAGGTGAGTGATTTCCTT-CCATTAACTCAAATTGATTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376787 169 - 25927173 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACCAGGAGCATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAGATTTTGAAGGTGAGTGATTTCCTT-CCATTAACTCAAATTGATTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406362 169 + 4669795 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACCAGGAGCATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAAATTTTGAAGGTGAGTGATTTCCTT-CCATTAACTCAAATTGATTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363257 169 + 135778131 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCGTGCTCACAA-ACCAGGAGCATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAAATTTTGAAGGTGAGTGATTTCCTT-CCATTAACTCAAATTGATTTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927204 169 + 2368649 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACTAGGAACATACTTCTAAAGTTGCCAATAGT--------GTAAAAAAGC---------AGATAACCAAATTTTGAAGGTGAGTGATTTCCTT-ACATTAACTCAAATTGATTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659403 168 - 190850796 AAGCTTTCCAGG-TTGGGTGTGAGTTACGTCAAGTACTAGT--TGGAATTGATTTTATTGTCC--TCTTGCTCACAA-ACCTGGAGCACACCTCCGAAGTTGCCAATGGT--------GCGAAAAAGC---------AGATAAGCAAATGTTCAA-GAGAGTGGTTTCCCT-ACATTAACTCAAGTTGGTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152199 168 - 14256875 AAGATCTCCAGG-TTGGGTCTGAGTTACGTCCAGTACTAGT--TGGAATTGATGTTACAGCCG--TCTTGCTCACAG-ACCTGGAGCACACCTCTGAAGTTGCCAATAGT--------GTGAAAAAGC---------AGATAGCCAAATTTTCAA-GAGAGTGGTTTTCCT-ACATTAACTCAAATTGATTTT i saiBol1.JH378165 I 684 C 0 s cebCap1.NW_016107886v1 1042638 168 - 2196201 AAGATTTCCAGG-TTGGGTCTGAGCTGCGTCAAGTACTAGT--TGGAATTGATTTTGCTGCCA--TCTTGCTCACAA-ACCTGGAACACACCTCTGAAGTTGCCAATAGT--------GTGAAAAAGC---------AGATAACCAAATTTTCAA-GAGAGTGGTTTCCCT-ACATTAACTCAAATTGATTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430268 168 - 5030052 AAGATTTCCAGG-TTGGGTCTGAGTTATGTCAAGTACTAGT--TGGAATTGATTTTATTGCTG--TCTTGCTCACAA-ACCTGGAGCACACCTCTGAAGTTGCCAATAGT--------GTGAAAAAGC---------AGATAACCAAATTTTCAA-GAGAGTGGTTTCCCT-ACATTAGCTAAAATTGATTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545396 168 - 93316391 AAGATTCCTAGA-TTGAGTCTGAGTTATGTCAGCTACTAGT--TGGCATTGATTTTATGGCTG--CCTTGGTCACAA-ACCGAGAGCATACATCTTAAGTTGCCAATAGT--------GCAAAAAACC---------AGAGAACCAAATTTTAAA-ATGGGTGGTTTCTCT-ACATTAATTCATATTGATTTT i micMur3.chr14 C 0 I 365 s otoGar3.GL873580 11279100 168 - 11315646 GAGAGTTCTGGA-TTGAATGTGAGTTATGTCAACTGTTAAT--TGGCATTGATTTTATGGCTT--TTGTGGTTACAT-ACCAAGAGCATACTTCTTAAGTTGCCAATAGT--------GTAAAAAAGC---------GGATAACCAAATTTTAAA-AGGGGTGGTTCCCCC-ACATTAACTCATATTGATTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86645758 177 - 129401213 TAGATTTCTAAATTTGAATCCAAGTTAGGTCAAATATTGATAGTTTAGTTGATTTTATTGCTG--TATTGTTTAAAACAACAAAAATACACTTCAAAAGTTGCCAATTGT--------GTAAAAAGACAACATCAAGAGACCACTGCCTTATGAA-ATGGGTTGTTC---T-TCATCAAC-CAACTTGCTTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16993167 177 - 59632846 AAAATTTCTGGA-TTGGGTATGAGTTATGTCAAGTATGAGT--TACTATTGATTTTATTTCTG--TCTTTCTCACAA-ACTAAGAGCACACTTCTACAGTTGTCAATAGTAAGAAGAAAAAAAAAAAC---------AGATAAGCAATTTTTGGA-ATAGGTGACTTCCCTAACATTAACTCAAATTGATTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1490966 169 - 2520184 AAGATTTTGGCA-TCAGGTCTCAGTTATAATTATTATGAGT--CGGTATTGATTATATTGCTGTTTTTTTTTCAAAA-ACTGAGAATATGCTTTTAAGGTTG-CAATAGT--------GTAAAGAAGC---------AGATAACTAAACTTTGAA-ATGGATGGTTTCCCT-ACATTAAGTCAAATTGATTTT i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=233252.000000 s hg38.chr4_KI270789v1_alt 159723 21 + 205944 GTTCTTCCTAATGCTGATAAG- s panTro5.chr4 192946875 21 + 194502333 GTTCTTCCTAATGCTGATAAG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830526 21 + 195804263 GTTCTTCCTAATGCTGATAAG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867737 21 + 4876863 GTTCTTCCTAATGCTGATAAG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758975 21 + 115148730 GTTCTTCCTAATGCTGATAAG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042739 21 + 190429646 GTTCTTCCTAATGCTGATAAG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985624 21 + 189454096 GTTCTTCCTAATGCTGATAAG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376956 21 - 25927173 GTTCTTCCTAATGCTGATAAG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406531 21 + 4669795 GTTCTTCCTAATGCTGATAAG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363426 21 + 135778131 GTTTTTCCTGATGTTGATAAG- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927373 21 + 2368649 GTTCTTCCTAATGCTGGTAAG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659571 21 - 190850796 GTTCTTCCCAGTCCTGGAAAA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152367 21 - 14256875 GTTCTTCCCAGTGCTGGAAAG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042806 21 - 2196201 GTTCTTCCCAGTGCTGCAAAG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430436 21 - 5030052 GTTCTTCCCAGTGCTGGGAAG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279268 21 - 11315646 GTTCTTCCCACTACTGATAAG- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86645935 21 - 129401213 ATGCTTTCACATGCTGCTAAG- i mm10.chr8 C 0 I 9 s canFam3.chr16 16993344 21 - 59632846 GTTCTTCCAAATAATGATAAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491135 21 - 2520184 -TCCTTCCCAATGCTAAAAAAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545564 365 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=175767.000000 s hg38.chr4_KI270789v1_alt 159744 18 + 205944 GATTATTTTGGAGTAGAA--- s panTro5.chr4 192946896 18 + 194502333 GATTATTTTGGAGTAGAA--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830547 18 + 195804263 GATTATTTTGGAGTAGAA--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867758 18 + 4876863 GATTCTTTTGGAGTAGAA--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112758996 18 + 115148730 GATTATTTTGGAGTAGAA--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042760 18 + 190429646 TATTATTTTGGAGTAGAA--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985645 18 + 189454096 TATTATTTTGGAGTAGAA--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376977 18 - 25927173 TATTATTTTGGAGTAGAA--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406552 18 + 4669795 TATTATTCTGGAGTAGAA--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363447 18 + 135778131 TATTATTTTGGAGTAGAA--- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927394 18 + 2368649 TATTATTTTGGAGTAGAA--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659592 17 - 190850796 TATCATTTTGGAGTAG-A--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152388 17 - 14256875 TATTATTTTGGAGTAG-A--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042827 17 - 2196201 TATTATTTTGGAGTAG-A--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430457 17 - 5030052 TATTATTTTGGAGTAG-A--- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279289 18 - 11315646 TATTATTTTGGAGTTGAA--- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16993365 18 - 59632846 TACTCTCTTGGAGTAGCA--- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491156 21 - 2520184 GGTTATTTTAGAGTAAAACAA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545564 365 - 93316391 I e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=84418.000000 s hg38.chr4_KI270789v1_alt 159762 8 + 205944 TAcagtag s panTro5.chr4 192946914 8 + 194502333 TAcagtag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830565 8 + 195804263 TAcagtag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867776 8 + 4876863 CAcagtag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759014 8 + 115148730 TAcagtag i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042778 8 + 190429646 TAcagtag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985663 8 + 189454096 TAcagtag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24376995 8 - 25927173 TAcagtag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406570 8 + 4669795 TAcagtag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363465 8 + 135778131 TAcagtag i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927412 8 + 2368649 TAcagtag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659609 7 - 190850796 TACAGT-G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152405 8 - 14256875 TAcagtaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042844 8 - 2196201 TACAGTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430474 8 - 5030052 TACAGTAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279307 8 - 11315646 TATAGCAG i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1491177 8 - 2520184 TACAGTGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17545564 365 - 93316391 I e canFam3.chr16 16993383 0 - 59632846 C e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=1676686.000000 s hg38.chr4_KI270789v1_alt 159770 221 + 205944 ccccctcttatccat---ggggatacattccaagaccctcagtaattgtctgaagtcccggacagtattgaa-ccctacatatactatgttttttcttatgcatacatgtctttaataaagtttaatttacaaattaggcacagtaggagactcacagta---tctaataaattggacgattataaaa--aaactgtaataaaa-ttatgtgaatgtggtctccttctctc s panTro5.chr4 192946922 221 + 194502333 ccccctcttatccat---ggggatacatttcaagaccctcagtaattgtctgaagtcccggacagtattgaa-ccctacatatactatgttttttcttatgcatacatgtctttaataaagtttaatttataaattaggcacagtaggagactcacagta---tctaataaattggacgattataaaa--aaactgtaataaaa-ttatgtgaatgtggtctccttctctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830573 221 + 195804263 ccccctcttatccat---ggggatacatttcaagaccctcagtaattgtctgaagtcccggacagtattgaa-ccctatatatactatgttttttcttatgcatacatgtctttaataaagtttaatttataaattaggcacagtaggagactcacagta---tctaataaattggacgattataaaa--aaactgtaataaaa-ttatgtgaatgtggtctccttctctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3867784 221 + 4876863 ccccctcttatccat---ggggatacattccaagaccctcagtaactgcctgaagtcccggacagtattgaa-ccctacatacactatgtttcttcttatgcatacatgtctttaatcaagtttaatttacaaactaggcacagtaggagactcacagta---tctaataaattggacgattacaaga--aaactgtaataaaa-ttatgtgaatgtggtctccttctctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759022 219 + 115148730 ccccctcttatccat---ggggatacattccaagaccttcaataattgtctgaagtcctggacagtattgaa-ccctacatatac--tgttttttcttatgcatacatgtctttaataaagtttaatttacaaattaggcacagtaggagactcacagta---tctaataaattggatgattataaaa--aaactataataaaa-ttatatgcatttggtctccctctctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189042786 220 + 190429646 ccccctgttatctat---ggggatacatcccaagaccctcagtaattgtctgaaatcccggatagtattgaa-ccctatgtgtactatcttttttctcatacatacatgtctatgatacagtttaatttacaaattgggcacaggaggagactaacagta---tctaataaattggatgattataaa---aaactataataaaa-ttatatgaatgtggtctccctctctc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985671 220 + 189454096 ccccctgttatctat---ggggatacatcccaagaccctcagtaattgtctgaaatcccggatagtattgaa-ccctatgtgtactatcttttttctcatacatacatgtctatgatacagtttaatttacaaattgggcacaggaggagactaacagta---tctaataaattggatgattataaa---aaactgtaataaaa-ttatatgaatgtggtctccctctctc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377003 220 - 25927173 ccccctgttatctat---ggggatacatcccaagaccctcagtaattgtctgaaatcccggatagtattgaa-ccctatgtgtactatcttttttctcatacatacatgtctatgatacagtttaatttacaaattgggcacaggaggagactaacagta---tctaataaattggatgattataaa---aaactgtaataaaa-ttatatgaatgtggtctccctctctc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406578 220 + 4669795 ccccctgttatctat---ggggatacatcccaagaccctcagtaattgtctgaaatcccggatagtattgaa-ccctatgtgtactatcttttttctcatacatacatgtctatgatacagtttaatttacaaattgggcacaggaggagactaacagta---tctaataaattggatgattataaa---aaactgtaataaaa-ctatatgaatgtggtctccctctctc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363473 220 + 135778131 ccccctgttatccat---ggggatacatcccaagaccctcagtaattgtctgaaatcccggatagtgttgaa-tcctatgtgtactatcctttttctcatgcatacatgtctatgatacagtttaatttacaaattgggcacgggaggagactaacagta---tctaataaattggatgattataaa---aaactgtaataaaa-ttatatgaatgtggtctccctctctc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927420 218 + 2368649 ccccctcttatccat---gggaatacatcccaagaccctcagtaattgtctgaaatcccggata---ttgaa-ccctacatgtactatcttttttctcatacatacatgtctatgatacagtttaatttacaaattgggcacaggaggagactaacagta---tctaataaattggatgattataaac--aaactgtaataaaa-ttatatgaatgtggtctccctctctc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659616 189 - 190850796 CCCCCTCTTA------------------TCCa--------------tgtctgagatctcggaccgtactgaa-ccttacatgtactgtg-tttttctcatacgtacatacctatgataaagtttaatttacaaattaggcac---aggagactgacagga---tctaataaattggacgattataacat-aaagtgcaataaaa-attagagaatgtgatctccctctctc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152413 204 - 14256875 ccccctcttatccat---ggggatgcattcca--------------tgtctgagatctcggaccgtattgat-ccttacatgtactgtg-tttttcttatacatacatatctatgataaagtttaatttacaaattaggcac---aggagactgacagta---tctaataaatcggacaattataacaa-aaagtgcaataaaa-attagagaatgtgacctccttctctc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1042852 204 - 2196201 CCCTCTCTTATCCAT---GGGGATGCATTCCa--------------tgtctgagatctcagaccgcattgaa-ccttacatgtactgtg-tttttcttatacgtacatacctatgataaagtttaatttacaaattaggcac---aggagactgacaata---tctaataaattggacaattataacca-aaagtgcaataaaa-attacagaacgtgatctccctctctc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430482 204 - 5030052 CCCTCTCTTATCCAT---GGGGATGCATTCCa--------------tgtctgaaatctcggaccgtattgaa-ccttacatgtactgtg-tttttcttatacatacatacctatgataaagtttaatttacaaattaggcac---aggagactgacagta---tctaataaattggacaattataacaa-aaagtacaataaaa-attaaagaatgtgatctccctctctc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279315 223 - 11315646 CTCccccccacatgtatgggagatgtgttccaagaccccaagtggatg-ctgaaaccaacaacagtaccgaacccccatatgtactgt--ttttttctatgcatacatatctatggtaacg-----tttataaactaggcacagtaagagactaacaacaatgactaatacatagaacaattataacaataaactatgataaaagttacattaagataatctctctttctc i otoGar3.GL873580 C 0 I 408 e micMur3.chr14 17545564 365 - 93316391 I e dasNov3.JH570353 1491185 0 - 2520184 C e canFam3.chr16 16993383 0 - 59632846 C e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=806996.000000 s hg38.chr4_KI270789v1_alt 159991 98 + 205944 caagtatact-acagtgctgtaatcacctattttcagcccat-gctgacttctagtaactgaaacctcaaaaagcaaaactccagataagg------ggTTTCATT s panTro5.chr4 192947143 98 + 194502333 caagtatact-atagtactgtactcacctattttcggcccat-gctgacttctagtaactgaaacctcaaaaagcaaaactccagataagg------ggTTTCATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830794 98 + 195804263 caagtatact-gtagtactgtactcacctattttcggcccat-gctgacttctagtaactgaaacctcaaaaagcaaaactccagataagg------ggTTTCATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868005 98 + 4876863 cgaatatact-atagtactgtactcacctattttcggcccat-gctgacttctagtaactgaaacctcaaaaagcaaaactccagataagg------ggTTTCATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759241 98 + 115148730 aaagtatact-gttgtactgtactcacctattttcggcccat-gctgacttctggtaactgaaacctcaaaaagcaaaacttcagataagg------ggTTTCATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043006 98 + 190429646 aaagtatact-attgtactgtcctcacctatttgtggcccat-gctgatttctggcaactgaaacctcaaaaagcaaagcttcagataagg------ggTTTTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985891 98 + 189454096 aaagtatact-attgtactgtcctcacctatttgtggcccat-gctgatttctggcaactgaaacctcaaaaagcaaagcttcagataagg------ggTTTTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377223 98 - 25927173 aaagtatact-attgtactgtcctcacctatttgtggcccat-gctgatttctggcaactgaaacctcaaaaagcaaagcttcagataagg------ggTTTTATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406798 98 + 4669795 aaagtatact-attgtgctgtcctcacctatttgtggcccat-gctgacttctggcaactgaaacctcaaaaggcaaagcttcagataagg------ggTTTTATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363693 98 + 135778131 aaagtatact-attgtactgtcctcacctatttgtggcccgt-gctgacttctggtaaccgaaacctcaaaaagcaaaacttcagataagg------ggTTTTATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927638 98 + 2368649 aaagtatact-attgtactgtcctcacctatttgtggcccac-gctgacttccggtaactgaaacctcaaaaagcaaagcttcagataagg------ggTTTTATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659805 98 - 190850796 aaagtatgct-attgtactgtactgacctattc-cagcccatggctgacctctggtaactgaaacctcaaaaagcaaaactgcagatgagg------ggTTTTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152617 98 - 14256875 agagtatgct-attgtaccgtactcacctattt-cagcccatggctgacctctggtaactgaaatctcaaaaagcaaaacttcagataaac------ggTTTTATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043056 91 - 2196201 aaagtatgcc-attgaactgtactcacctattt-ca-------gctgacctctggtaactgaaacctcaaaaagcaaaacttcagataagg------ggTTTTATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430686 98 - 5030052 aaagtatgct-attatactgtacttacctattt-cagcccatggcttacctctggtaactgaaacctcaaaaagcaaaacttcagataagg------ggTTTTATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11279946 101 - 11315646 catatatattcattgtactgtactcagctattttcagcccattattgatgtccagtaactgaatctgggaaaagtgaaactttggataaggtagagagaac----- i otoGar3.GL873580 I 408 C 0 e micMur3.chr14 17545564 365 - 93316391 I e dasNov3.JH570353 1491185 0 - 2520184 C e canFam3.chr16 16993383 0 - 59632846 C e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=39609.000000 s hg38.chr4_KI270789v1_alt 160089 5 + 205944 TACTG s panTro5.chr4 192947241 5 + 194502333 TACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830892 5 + 195804263 TACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868103 5 + 4876863 TACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759339 5 + 115148730 TACTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043104 5 + 190429646 TGCTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985989 5 + 189454096 TGCTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377321 5 - 25927173 TGCTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406896 5 + 4669795 TGCTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363791 5 + 135778131 TGCTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927736 5 + 2368649 TGCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659903 5 - 190850796 TACCG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152715 5 - 14256875 TACTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043147 5 - 2196201 TACTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430784 5 - 5030052 TACTG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545929 5 - 93316391 tactg i micMur3.chr14 I 365 C 0 s otoGar3.GL873580 11280047 5 - 11315646 tactg i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1491185 0 - 2520184 C e canFam3.chr16 16993383 0 - 59632846 C e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=134803.000000 s hg38.chr4_KI270789v1_alt 160094 11 + 205944 TAATAAAATGA s panTro5.chr4 192947246 11 + 194502333 TAATAAAATGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830897 11 + 195804263 TAATAAAATGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868108 11 + 4876863 TAATAAAATGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759344 11 + 115148730 TAATAAAATGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043109 11 + 190429646 TAATAAAATGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187985994 11 + 189454096 TAATAAAATGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377326 11 - 25927173 TAATAAAATGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406901 11 + 4669795 TAATAAAATGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363796 11 + 135778131 TAATAAAATGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927741 11 + 2368649 TAATAAAATGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659908 11 - 190850796 TAATAAAATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152720 11 - 14256875 TAATAAAATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043152 11 - 2196201 TAATAAAATAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430789 11 - 5030052 TAATAAAATAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545934 11 - 93316391 TAGGAAAATGG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280052 11 - 11315646 TAATAAAATGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16993383 11 - 59632846 TAATAAAATGG i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1491185 0 - 2520184 C e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=263004.000000 s hg38.chr4_KI270789v1_alt 160105 19 + 205944 AAATTCTGTAAACATGTTT s panTro5.chr4 192947257 19 + 194502333 AACTTCTGTAAACATGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830908 19 + 195804263 AACTTCTGTAAACATGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868119 19 + 4876863 AAATTCTGTAAACATGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759355 19 + 115148730 AAATTCTGTAAACATGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043120 19 + 190429646 AAATTCTGTAAACATGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986005 19 + 189454096 AAATTCTGTAAACATGTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377337 19 - 25927173 AAATTCTGTAAACATGTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406912 19 + 4669795 AAATTCTGTAAACATGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363807 19 + 135778131 AAATTCTGTAAACATGTTT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927752 19 + 2368649 AAATTCTGTAAACATGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659919 19 - 190850796 AAATTCTGTAGACATGTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152731 19 - 14256875 AAATTCTGTAGACATGTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043163 19 - 2196201 AAATTCTGTAGACATGTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430800 19 - 5030052 AAATTCTGCAGACGTGTTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545945 19 - 93316391 AAATTCTATAAACATGTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280063 19 - 11315646 AAAGTCAACAAACATGTTT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16993394 19 - 59632846 AAATTCTGTAAACATGTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491185 19 - 2520184 AGATTCTATAAACATGTTT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86645956 9 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=513208.000000 s hg38.chr4_KI270789v1_alt 160124 39 + 205944 AGTTGAAAATATCTTACAGACATAC-ATAATTCAGTGGAA s panTro5.chr4 192947276 39 + 194502333 AGTTGAAAATATCTTAAAGACATAC-ATAATTCAGTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830927 39 + 195804263 AGTTGAAAATATCTTAAAGACATAC-ATAATTCAGTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868138 39 + 4876863 AGTTGAAAGTATCTTAAAGACATAC-ATAATTCAGTGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759374 39 + 115148730 AGTTGAAAATATCTTAAAGACATAC-ATAATTCAGTGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043139 39 + 190429646 AGTTGAAAATATCTGAAAGACATAC-ATAATTCAGTAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986024 39 + 189454096 AGTTGAAAATACCTGAAAGACATAC-ATAATTCAGTAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377356 39 - 25927173 AGTTGAAAATATCTGAAAGACATAC-ATAATTCAGTAGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406931 39 + 4669795 AGTTGAAAATATCTGAAAGACATAC-ATAATTCAGTAGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363826 39 + 135778131 AGTTGAAAATATCTTAAAGACATAC-ATAATTCAGTGGAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927771 39 + 2368649 AGTTGAAAATATATTAAAGATATAC-ATAATTCAGTGGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659938 39 - 190850796 AGTGGAAAATATCTTAAAGACGTAT-ATAATTCAGTGGGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152750 39 - 14256875 AGTGGAAAATATCTCAAAGACATAT-ATAATTCAGTGGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043182 38 - 2196201 AGTGG-AAATATCTTAAAGACATAT-ATAATTCAGTGGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430819 39 - 5030052 AGTGGAAAATATCTTAAAGACATAT-ATAATTCAGTGGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17545964 39 - 93316391 AGTTGAAAATATCCTATACATATAC-ATAATTCAATGGAA i micMur3.chr14 C 0 I 154 s otoGar3.GL873580 11280082 39 - 11315646 GGCAGAAAATATCCTAAAGATATAC-ATAAATCAATGGAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86645965 37 - 129401213 AGTTG-AAATATCCTAAAGATA-GT-ATAATTTAACGGAA i mm10.chr8 I 9 C 0 s canFam3.chr16 16993413 40 - 59632846 AGTTGAAAGTATcctaaagatacacaataattcagtggca i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491204 40 - 2520184 AGTTGAAAATATCCTAAAAATATACTAGAGTTCAGTGGAA i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=295996.000000 s hg38.chr4_KI270789v1_alt 160163 32 + 205944 GCGATAGTGATATGTttcagaaattcagattc s panTro5.chr4 192947315 32 + 194502333 GCGATAGTGATATGTttcagaaattcagattc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830966 32 + 195804263 GCGATAGTGATATGTttcagaaattcagattc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868177 32 + 4876863 GCGATAGTGATATGTTTCAGAAATTCAGATTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759413 32 + 115148730 GCTATAGTGATATGTttcagaaattcagattc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043178 32 + 190429646 GCTATAGTGATACGtttcagaaattcagattc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986063 32 + 189454096 GCTATAGTGATACGtttcagaaattcagattc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377395 32 - 25927173 GCTATAGTGATACGTttcagaaattcagattc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3406970 32 + 4669795 GCTATAGTGATACGtttcagaaattcagattc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363865 32 + 135778131 GCTATAGTGATACATTTCAGAAATTCAGAGTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927810 32 + 2368649 GCTATAGTGATACATTTGAGAAattcagattc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189659977 32 - 190850796 GCTACAGTGATATATTTCAGAAATTCAGACTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152789 32 - 14256875 GCTACAGTGATATATTTCAGACATTCAGATTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043220 32 - 2196201 GCTACAGTGATATATTTCAGAAATTCAGATTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430858 32 - 5030052 GCTACAGTGATATATTTCAGAAATTCAGATTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11280121 31 - 11315646 GATATAAAGATATAGCTCAGAAATTCAGATT- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646002 25 - 129401213 GGTATAATGATAAGTCTCAGAATTC------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16993453 24 - 59632846 gatctaaaagtagagctcagAAAT-------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491244 29 - 2520184 GATATAAAG---TGTTGGAGAAAATAGGGCTC i dasNov3.JH570353 C 0 I 571 e micMur3.chr14 17546003 154 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=45175.000000 s hg38.chr4_KI270789v1_alt 160195 9 + 205944 aagatttca s panTro5.chr4 192947347 9 + 194502333 aagatttca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192830998 9 + 195804263 aagatttca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868209 9 + 4876863 AAGATTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759445 9 + 115148730 aagatttca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043210 9 + 190429646 aagatttca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986095 9 + 189454096 aagatttca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377427 9 - 25927173 aagatttca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407002 9 + 4669795 aagatttca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363897 9 + 135778131 AAGATTTCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927842 9 + 2368649 aagatttca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660009 6 - 190850796 ACGATG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152821 6 - 14256875 AAGATT--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043252 6 - 2196201 AAGATT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430890 6 - 5030052 AAGATT--- i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17546003 154 - 93316391 I e dasNov3.JH570353 1491273 571 - 2520184 I e canFam3.chr16 16993477 0 - 59632846 C e mm10.chr8 86646027 0 - 129401213 C e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I e otoGar3.GL873580 11280152 0 - 11315646 C a score=642832.000000 s hg38.chr4_KI270789v1_alt 160204 111 + 205944 gaaattcag----------------------tttcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--AT-------------------------------tatatataata---------tat----attattattatttcc s panTro5.chr4 192947356 116 + 194502333 gaaattcag----------------------tttcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--AT-------------------------------tatatataatata----tattat----attattattatttcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831007 116 + 195804263 gaaattcag----------------------tttcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--AT-------------------------------tatatataatata----tattat----attattattatttcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868218 111 + 4876863 GAAATTCAG----------------------TTTCAAGGTTCAAGGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCGGCCT--TGA--AT-------------------------------TATATATAATG---------TAT----ATTATTATTATTTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759454 110 + 115148730 gaaattcag----------------------tttcaaggttcaagGCTCTTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--at-------------------------------tatatataata---------tat----atta-tgttatttcc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043219 123 + 190429646 gaaattcag----------------------ttgcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATAAAATCAAGATTCTGCCT--TGA--at------------------------atatatatatataaaatata----tattag----aatattattatttct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986104 123 + 189454096 gaaattcag----------------------ttgcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATAAAATCAAGATTCTGCCT--TGA--at------------------------atatatatatatataatata----tattag----aatattattatttct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377436 123 - 25927173 gaaattcag----------------------ttgcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATAAAATCAAGATTCTGCCT--TGA--at------------------------atatatatatataaaatata----tattgg----aatattattatttct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407011 125 + 4669795 gaaattcag----------------------ttgcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATAAAATCAAGATTCTGCCT--TGAatat------------------------atatatatatataaaatata----tattag----aatattattatttct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134363906 145 + 135778131 GAAATTCAGATTCAAGATTTCAGAAATTCATTTGCAAGGTTCAAGGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATAAAATCAAGATTCTGCCT--TGA--at------------------------ataaatatatatataatata----tattag----attattattatttct i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927851 121 + 2368649 gaaattcag----------------------tttcaaggttcaagGCTCCTCTGACAATTGAATGAC-TTAG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--at------------------------atatatatatat--aatata----tattag----attattattatttct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660015 95 - 190850796 -------AG----------------------GTTCAGGA----------CTCTGACAACTGAATGAC---TG-TTTTTCAAATATAATCAGGATTCTGCCT--TGA--CT------------------------ATACAC--ACAT---ATATA----TATT--------TAATATGATTTCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152827 99 - 14256875 -------AG----------------------GTTCAGGA----------CTCTGACAATTGAATGAC-TTTG-TTTTTCAAGTATAATCAAGATTCTGCCT--TGA--CT------------------------ATATACTTATAT---ATGTA----TATT--------TAATATGATTTCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043258 93 - 2196201 -------AG----------------------GTTCAGGA----------CTCTGACAAATGAATGAC-TTTG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--Ct------------------------atatac---------atata----tatt--------taatatgatttct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430896 99 - 5030052 -------AG----------------------GTTCAGGA----------CTCTGACAATTGAATGAC-TTTG-TTTTTCAAATATAATCAAGATTCTGCCT--TGA--Ct------------------------atatccatatat---atata----tatt--------taatatgatttcc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11280152 132 - 11315646 -------------------------------TT---GGGTTCAAATTTCCTC-----------TGAC-TCAG-TTTTTCTGATATAATCAAGATTAAGCCT--TGA--GTCATACACATGGGGTGCCCCCCAAAATGAATATACATTTTATGCAATCCTATTGGAACTAAGACTAATCTTTCC i otoGar3.GL873580 C 0 I 128 s mm10.chr8 86646027 60 - 129401213 -------------------------------TTTCATGGTTT-------TTCTGA--------TTGC-TTGA-ATTTCCTAATATAATTAACATTTTTTTTCATGA--CT------------------------------------------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16993477 78 - 59632846 -------AG----------------------ATTTTAGGTTCAAAGCTCTTCT----ATTTAATCATGTTAA-TTTTTCTAATATAATTGAGATCCTGCCT--TGA--CT------------------------ATATAA------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491844 91 - 2520184 GAATTCCAG----------------------TTTCA-GGCTCAAGGTTCTACTGACattttttttct-ttaattttttctaatataattaaaattttGTCT--GGA--CT--------------------------------TTATACAAT-------------------------------- i dasNov3.JH570353 I 571 C 0 e micMur3.chr14 17546003 154 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=132567.000000 s hg38.chr4_KI270789v1_alt 160315 14 + 205944 atatataatttatG s panTro5.chr4 192947472 14 + 194502333 atatataatttatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831123 14 + 195804263 atatataatttatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868329 14 + 4876863 ATATATAATTTATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759564 14 + 115148730 atatataatttatg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043342 14 + 190429646 gtatataACTTATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986227 14 + 189454096 gtatataACTTATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377559 14 - 25927173 gtatataACTTATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407136 14 + 4669795 gtatataACTTATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364051 14 + 135778131 gtatataACTTATG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927972 14 + 2368649 gtatataACTTATG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660110 12 - 190850796 ATATGTAAC--ATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152926 14 - 14256875 ATATTTAACTTATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043351 14 - 2196201 atatgtaACTTATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3430995 14 - 5030052 atatgtaACTTATG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11280412 14 - 11315646 ATGGATGACTTGTG i otoGar3.GL873580 I 128 C 0 s mm10.chr8 86646087 14 - 129401213 CTATCTGACTTATG i mm10.chr8 C 0 C 0 s canFam3.chr16 16993555 10 - 59632846 ----GTGCCTTATG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491935 6 - 2520184 --------CTCATG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546003 154 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=5406194.000000 s hg38.chr4_KI270789v1_alt 160329 414 + 205944 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATACTGTCTTTTGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAGCAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGGAAA-ACCCAGTTTGTGTCAGAGGGTGAAACTTGCTTGACTAGATCTGTTCACTGAAGCCATTGAACAACTTCCGATGTTCTTGCTCTCTCCCATTTACGATGCTGAACTTT-ACAGAGACAGACTGTTTGAAGCCTTCCTAATTAT---TCCCATTCTTAGCCAA-GAAGGATTACTAAAGCTCAGCCTCTATTGTAATTCTTAAA s panTro5.chr4 192947486 414 + 194502333 gaaaagttata--------aaattaatata----aacatttgaaataCTGTCTTTTGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAGCAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGGAAA-ACCCAGTTTGTGTCAGAGGGTGAAACTTGCTTGACTAGATCTGTTCACTGAAGCCATTGAACAACTTCCGATGTTCTTGCTCTCTCTCATTTACGATGCTGAACTTT-ACAGAGACAGACTGTTTGAAGCCTTCCTAATTAT---TGCCATTCTTAGCCAA-GAAGGATTACTAAAGCTCAGCCTCTATTGTAATTCTTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831137 414 + 195804263 gaaaagttata--------aaattaatata----aacatttgaaataCTGTCTTTTGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAGCAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGGAAA-ACCCAGTTTGTGTCAGAGGGTGAAACTTGCTTGACTAGATCTGTTCACTGAAGCCATTGAACAACTTCCGATGTTCTTGCTCTCTCTCATTTACGATGCTGAACTTT-ACAGAGACAGACTGTTTGAAGCCTTCCTAATTAT---TGCCATTCTTAGCCAA-GAAGGATTACTAAAGCTCAGCCTCTATTGTAATTCTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868343 414 + 4876863 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATACTGTCTTTTGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAGCAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGGAAA-ACCCAGTTTGTGTCAGAGGGTGAAACTTGCTTGACTAGATCTGTTCACTGAAGCCATTGAACAACTTCCGATGTTCTTGCTCTCTCCCATTTACGACGCTGAACTTT-ACAGAGACAGACTGTTTGAAGCCTTCCTAATTAT---TCCCATTCTTAGCCAA-GAAGGATTACTAAAGCTCAGCCTCTATTGTAATTCTTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759578 415 + 115148730 gaaaagttata--------aaattaatata----aacatttgaaataCTGTCTTTTGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAGCAGGTGAAAAGTATGCAAAAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCAATTTTTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACTGAAGCCATTAAACAACTTTCGATGTTCTTGCTCTCTCCCATTTACGACGCTAAACTTTGACAGAGACAGACTGTTTGAAGCCTTCCTAATTAT---TTCCATTCTTAGCCAA-GAAGGATTACTAAAGCTCAGCCTCTATTGTAATTCTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043356 418 + 190429646 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATGTTATCTTTCGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------GAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACATCACTACTTAGCAATATGATTTGTTCAAACAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCGATTTGTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCGAAGCTATTAAACAGCTTTCGATGCTCTTGCTCTCCCCCATTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCTAATTATCCTTTCCATTCCTACCCAA-GAAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986241 418 + 189454096 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATGTTATCTTTCGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------GAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACATCACTACTTAGCAATATGATTTGTTCAAACAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCGATTTGTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCGAAGCTATTAAACAGCTTTCGATGCTCTTGCTCTCCCCCATTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCTAATTATCCTTTCCATTCCTACCCAA-GAAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377573 418 - 25927173 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATGTTATCTTTCGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------GAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACGTCACTACTTAGCAATATGATTTGTTCAAACAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCGATTTGTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCGAAGCTATTAAACAGCTTTTGATGCTCTTGCTCTCCCCCATTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCTAATTATCCTTTCCATTCCTACCCAA-GAAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTTAAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407150 418 + 4669795 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATGTTATCTTTCGGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------GAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACATCACTACTTAGCAATATAATTTGTTCAAACAGGTGAAAAGTATACAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCGATTTGTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCGAAGCCATTAAACAGCTTTCGATGCTCTTGCTCTCCCCCATTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCTAATTATCCTTTCCATTCCTACCCAA-GAAGGATGACTAAAGCTCAGCCTCTACTGTGATTCTTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364065 418 + 135778131 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATATTATCTTTCGGCTTACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACATCACTACTTAGCAATATGATTTGTTCAAACAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAAAAGGAGCTTTAATTTTCATCAGCAAA-ACCCGATTTGTGTCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCGAAGCCATTAAACAGCTTCTGATGCTCTTGCTCTCCCCCATTTAGGACACTAAATTTTTATAGAGACAGACTGTTTGAAGCCTTCCTAATTATCCTTTCCATTCCTACCCAA-GAAGGATGACTGAAGCTCAGCCTCTACTGTAATTCTTAAA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 927986 417 + 2368649 GAAAAGTTATA--------AAATTAATATA----AACATTTGAAATATTATCTTTCAGCTCATTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTTGAAAGGCCAAGTGATTTAAAG----CAGG----TACATCACTACTTAGCAATACGATTTGTTCAAACAGGTGAAAAGTATGCAAGAATCAAAATGCTC-TTTGCCAAAGGAGCTTCAATTTTCATCAGCAAA-ACCCGATTTGTGCCAGAGGGTGAAACTTGCTTGATTAGATCTGTTCACCAAAGCCATTAAACAGCTCTCGATGTTCTGGCTCTCCCCCATTTAGGGCACTGAACTTTTACAGAGGCAGACTGTTGGAAGCCTTTCTAATTATCC-TTCCATTCCTGCCCAA-GAAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTTAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660122 403 - 190850796 GGAAAGTTATAATACTATAAAATTAATATA----AACGTTTGAAATGTTGTCTTTCTGCTCACTTGGAAGAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAGATGAGAAAGGCCGAGTGATGTAAGG----CAGG----TGCATCACTACTTAGCAATACGATTTGTCCAAGCAAGTGAAAAGTACGCAAGCATCTAAATGCTC-TTTGCAGAAGGACCTTCGATTTTCATCAGCAGAGACCCAGTTTGTGTCAGAGGGTGAAAC-------------TCTGTTCAC-GAAGCCATTAAACAACTCTCCG------TGTTCTCTCCCATTTAGGGCACTAAACTTTTACAGGCACAGACTGTTGGAAGCCTTCCTAATTAT---TTCCATTCTTACCCCA-GAAGGATGACGAAAGCTCAG-CTCTATTGTAATTCTCAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13152940 419 - 14256875 GGAAAGTTATAACATTATGaaattaatata----aaattttgaaatattatCTTTCTGCTCACTTTGAAAATATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTGGAAAGGCCAAGTGATTTAAGG----CAGG----TACATCACTACTTAGCAAAGCGATATGTTCAAGCAAGTGAAAAATATGCAAGAATCAAAGTGCTC-TTTGCAGAAGGAGCTTCGATTT---TCAACAAAGACCCAGTTTGTGTCAGGGGGTGAAACTCGCTTGAGTAGATCTGTTCGC-GAAGCCATGAAACAGCTTTCCGTGCTTCTGCTCTCTCCCATTTAGGG-ACTAAGCTTTTACAGGGACAGACTGTTTGAAGCCTTCCTAATTAT---TTCCATTCTTACCCCA-GGAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTCAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043365 422 - 2196201 GGAAAGTTATAACATTATAAAATTAATATA----AACATTTGAAATGTTATCTTTCTGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTGGAAAGGCCAAGTGATTTAAGG----CAGGTACATACATCACTACTTAGCAATGCGATTTGTTCAAG-----AAAAAGTATGCAAGAATCAAAATGCTC-TTTGCAGAAGGAGCTTTGATTTTCATCAGCAAAGACCCAGTTTGTGTCAGAGGGTGAAACTCGCCTGAGTAGATCTTTTCAC-GAAGCCATTAAACAACTTTCCGTGTTCCTGCTCTCTCCCATTCAGGGCACTAAGCTTTTACAGGGACAGACTGTTTGAAGCCTTCCTAATTAT---TTCCATTCTTACCCCA-GAAGGATGACTAAAGCTCAGCCTCTACTGTAATTCTCAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431009 417 - 5030052 GGAAAGTTATAACATTATAAAATTAATATA----AACATTTGAAATGTTGTCTTTCTGCTCACTTTGAAAAGATTTCCAGTTTGC-TTCTAAATGAATAA-----------------CAAATTGGAAAGGCCGAGTGATTTAAGG----CAGG----TACGTCACTACTTAGCAACATGATTTGTTCACGCAAATGAAAAGTGTGCAAGAATCAAAATGCTC-TTTGCAGAAGGAGCTTCGATTTTCATCAGCAAAGACCCAGTTTGTGTCAGAGGGTGAAGCTAGCTTGATTAGATCTGTCCAT-GAAGCCATTAAACAACTTTCCG------TCTTCTCTCCCATTTAGGGCACTAAACGTTTACAGGGACAGACTGTTTGAAGCCTTCCTAATTAT---TTCCATTCTTACCCCA-GAAGGATGACTGATGCTCAGCCTCTATTGTAATTCTCAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546157 414 - 93316391 GAAAAGTCATA--------AAACTAATATA----AACATTTGAAACATTTTCCTTTTGCTCGCTTTGAAAAGATTTTG--TTTGC-TTCCAAATGAATAA-----------------CAAAACTGAAAGGCCAAGTGACTCGAGG----CAGG----TACATCACTACTTTGCAGGACGATTTGTTCAAGCAGGTGAAAAGTACGCAAGGATCCAAATGTTC-TTTGCACAAGTAGCTTCCATTTTCATCAGCAAAGACCCAGTTTATGTCAGAGGGTAAAACTTGCCTGATTAGGTCTGTTCAACAAAGCTGTTAAACAGCTTTCGATGTTCTTGCTCTCTCACGCTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCCAATTAT---TTCCATTATTATCTAA-GAAGGATGACTGAGGTTCAGCCTCTATTGTAATTCTCAAA i micMur3.chr14 I 154 C 0 s otoGar3.GL873580 11280426 405 - 11315646 GAACAGTCATA--------AAACAAGTATA----AACATTTAAAACATTTTCTTTTTGATTACCTTGAAAAGATTTTAACTTTGC-TTCAAAATGAATAA-----------------CCAATCTGAAAGGCCAAGTGACTCGAGG----CAGA----GGCCTCACTATTT----------TCTATTCAAGCAGGTGAAAAGTTAACAAGAATCTAAATGTTC-TTTGCAAAACTAGCTTCAGTTTTCATCAGCAAAGATCCAATTTATGTCAGGGGGTAAAACTTGCCTGATTAGATCTGTTCAACAAAGCTGTTAAACAACTTTCAATGTTCTTGCTCCCTCCCATTTAGGACACTAAACTTTTACAGAGACAGACTGTTTGAAGCCTTCCCAATTAT---TTCCATTATTACCGAA--AAGGACTACTGAGATTCAGCCACTATTATAATTCTTGAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646101 434 - 129401213 GAAAAGTTATA--------AAGTTCACAAA----AAGAATTGAAA----ATTTTTTTTCTAAGTTTGAAAAGACTTCCAATTTTCTTTCTAAGTGAAAAACAAAACAAAACAAAAATCAAACCTTAAAAACCAAGTAATTCAAGGCAGACAGG----CACATTATTATCTTCTAACACAGTTTGTTCAAACGGGTGAAGAGCATGATAGAATCTGAACATTTGTCTGTGACCGTAGCTCCAATTTTCATTAGTGAAGACCCAATTTGTGTCAGAGGGTAAAACTTACCTGATGAGAGCTGTT-GCGAAAGCTATTAAACAACTTTCAGTGTTCTTGCTCCCTCACATGTAGGACACTAAACTTTTACAGAGATAGACTGCTTGAAGCCTTCCTAATTAT---TTCCATTATCACCTCA-GAAGGATCACTAAAGCTTAGCCTCTCCTGTAATTCTACAA i mm10.chr8 C 0 C 0 s canFam3.chr16 16993565 419 - 59632846 AAAGAGTTATA--------AAATTAATATATAGGGACA-TTGAAATATTTTCTTTTTGCTCACTTTGAAAAGACTTCCAGTCTGC-TTCAAAATGAGTAT-----------------CAAATTTGAAAAGCCAAGTGATTTAAGG----CCGG----TATATCATTACTTTCCTGTATGGTTTGTTCAAGCAGGTAAAAAGGACGCAAGAATCTGAATGTTC-TTTGCAACAGTAGGTTCAATTTTCATCAGCCAAGACCCAATTTGTGTCAGAGGGTAAAACTTGCCTGATTAGATCTGTTCAAAAAAGCCATTAAACAACTTTCAATGTTCTTGCTCTCTCACATTTAGGACACTAAACTTTTACAGAGACAGGCTGTTTGAAGCCTTCCTAATTAT---TTCCATTATTGTCCAA-GAAGGATTACTAATGTTCAGCCTCCATTGGAATTCTCAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1491941 405 - 2520184 GAAAAGTTATA--------AAATT-ATTTA----AACATTGGAAA-ATTTTTCTTTGGATCCCTAAGGAAAGA-TTCCATTATGC-TTATCAATGAACAT-----------------CAGATTTGAAAGGCCAAGTGATTCAAGG----CAGA----T-CAGCATTACTTTCTCGTGTGGTTTGCTCAAGCAGGTGAAAAGTATGAGAG------AATGTTC-TTTGCAATAGTAGTTCCAATTTTCATCAGCACA-GACCATTTTGTGTCAGA-GGTGAAACCTGCCTGATGAAATCTGCTCAACAAAGCCATTAAAGAACTTTTAGTGCTCTCGTTCCCTCACTTTTAGGAAGCTAAACTTTTACAGAGACAGGCTGTTTGAAGCTTTCTTAATTAT---TTCCATTATTAACCAAAGAAGGAGTGCGAAGGCTCAGCCTCTAGTGCAATTTTCAAG i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=37692.000000 s hg38.chr4_KI270789v1_alt 160743 7 + 205944 CTTCT--CA s panTro5.chr4 192947900 7 + 194502333 CTTCT--CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831551 7 + 195804263 CTTCT--CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868757 7 + 4876863 GTTCT--CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112759993 7 + 115148730 GTTCT--CA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043774 5 + 190429646 GTTCT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986659 5 + 189454096 GTTCT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377991 5 - 25927173 GTTCT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407568 5 + 4669795 GTTCT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364483 5 + 135778131 GTTCT---- i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928403 7 + 2368649 GTTCTCA-- i colAng1.NW_012116221v1 C 0 I 29 s calJac3.chr3 189660525 7 - 190850796 GTTCT--CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153359 7 - 14256875 GTTCT--CA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043787 7 - 2196201 GTTCT--CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431426 7 - 5030052 GTTCT--CG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546571 7 - 93316391 GTTCT--CA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280831 7 - 11315646 GTTCT--CA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16993984 7 - 59632846 GTTCT--CA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492346 6 - 2520184 -TTCT--CA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86646535 0 - 129401213 C e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=80702.000000 s hg38.chr4_KI270789v1_alt 160750 11 + 205944 GTGCAAATTAT s panTro5.chr4 192947907 11 + 194502333 GTGCAAATTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831558 11 + 195804263 GTGCAAATTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868764 11 + 4876863 GTGCAAATTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760000 11 + 115148730 GTGCAAATTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043779 8 + 190429646 ---CCAATTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986664 8 + 189454096 ---CCAATTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24377996 8 - 25927173 ---CCAATTAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407573 8 + 4669795 ---CCAATTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364488 8 + 135778131 ---CCAATTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189660532 11 - 190850796 GTGCAAATTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153366 11 - 14256875 GTGCAAATTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043794 11 - 2196201 GTGCAAATTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431433 11 - 5030052 GTGCAAATTAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546578 8 - 93316391 GTGCAAAT--- i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280838 8 - 11315646 GTGCAAAT--- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16993991 11 - 59632846 GGGCAAATGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492352 11 - 2520184 GGGCAAATTAC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86646535 0 - 129401213 C e colAng1.NW_012116221v1 928410 29 + 2368649 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=1362694.000000 s hg38.chr4_KI270789v1_alt 160761 108 + 205944 TAATATATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTCGAGTCTCTCTAGCAGTGAACTTGAGGATCATGCAAACATGTTCTATGGGAAC s panTro5.chr4 192947918 108 + 194502333 TAATATATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTCGAGTCTCTCTAGCAGTGAACTTGAGGATCATGCAAACGTGTTCTATGGGAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831569 108 + 195804263 TAATATATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTCGAGTCTCTCTAGCAGTGAACTTGAGGATCATGCAAACGTGTTCTATGGGAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868775 108 + 4876863 TAATATATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTAGAGTCTCTCTAGCAGTGAACTTGAGGATCATGCAAACGTGTTCTATGGGAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760011 108 + 115148730 TAATATATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTAGAGTCTCTCTAGCAGTGAACTTGAGGATCATGCAAACGTGTTCTTTGGGAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043787 107 + 190429646 TAATATATGGCAACCT-AA--------------------GTGCCTTTCTCTGGCTTTAGGACCTGATTATTATTTAGCGTCTCTCTAGTAGTGAACTCGAGGATCACGCAAACGTGGTCTTTGGGAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986672 107 + 189454096 TAATATATGGCAACCT-AA--------------------GTGCCTTTCTCTGGCTTTAGGACCTGATTATTATTTAGCGTCTCTCTAGTAGTGAACTCGAGGATCACGCAAACGTGGTCTTAGGGAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378004 107 - 25927173 TAATATATGGCAACCT-AA--------------------GTGCCTTTCTCTGGCTTTAGGACCTGATTATTATTTAGTGTCTCTCTAGTAGTGAACTCGAGGATCACGCAAACGTGGTCTTTGGGAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407581 107 + 4669795 TAATATATGGCAACCT-AA--------------------GTGCCTTTCTCTGGCTTTAGGACCTGATTATTATTTAGCGTCTCTCTAGTAGTGAACTCCAGGATCACGCAAACGTGGTCTTTGGGAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364496 108 + 135778131 TAATATATGGCAACCTAAA--------------------GTGCCTTTCTCCGGCTTTAGGACCTGATTACTATTTAGCGTCTCTCTAGTAGTGAACTCGAGGATCACGCAAACCTGGTCTTTGGGAAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928439 108 + 2368649 taatataTGGCAACCTAAA--------------------ATGCCTTTCTCTGGCTTTAGGACCTGATTATTATTTAGCGTCTCTCTAGTGGTGAACTCGAGGATCACGCAGACGTGGTCTTTGGGAAC i colAng1.NW_012116221v1 I 29 C 0 s calJac3.chr3 189660543 108 - 190850796 TAATACATGGCAATTTAAA--------------------ATGCCTTTCCCTGGCTTTGTGACTTTATTATTATTTAGTGTCTTTCTGGTAGTGAACTTGAGGATCATGCAAATATGTTCTTTGGGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153377 108 - 14256875 TAATATATGGCAATTTAAA--------------------ATGCCTTTCTCTGGCTTTATGACTTAATTATTATTTAGAGTCTTTCTAGTAGTGAACTTGAGGATCATGCAAATATGTTCTTTGGGAAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043805 108 - 2196201 GAATGTATGGCAATTTAAA--------------------ATGCCTTTCTCTGGCTTTATGACTTGATTATTATTTAGAGTCTTTCTAGTAGTGAACTTGAGGATCATGCAAATGTGTTCTTTGGGAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431444 108 - 5030052 TAATATATGGCAATTTAAA--------------------ATGCCTTTCTCTGGCTTTATGACTTGATTATTATTTAGAGTCTTTCTAGTAGTGAACTTGAGGATCATGCAGATGTGCTCTTTGGGAAC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546586 105 - 93316391 ---TGCATGGCAATCTAAA--------------------ATGCCTTTCTCTGGCTTTATGACCTGATTATTATTTAGCGTCTCTCCAGCAGTGAACTTGAAGTGCATGCAAATGTGTTCTTTGGAAAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280846 105 - 11315646 ---TATATGGCAATCTACA--------------------ATGCCTTTCTCTGGCTTTATGACCCGATTATTATTTAGTGTCTCTCTAGCAGTGAACCTGAAGATCATGCAAATGTGTTCTTTGAGAAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16994002 122 - 59632846 ------ACGACAATCTGAAAAGTTCTCAGGGCAAATGATATGGCTTTCTCTGGCTTTATGGCCTGATGATTATTTAGAGTCTCTCCAGCAGTGAACTTGAAGATCATGCAAATGTGCTCTTTAGGAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492363 102 - 2520184 ------ATGGCAATCAAAA--------------------ATACCTTTCTCTGGCTTTATGACCTGATTATTATTTAGAGTCTCTCCTGCAGTGAACTCGAAGATCATGCAAATGTGTTCTTTGGGAAA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86646535 0 - 129401213 C e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=501938.000000 s hg38.chr4_KI270789v1_alt 160869 37 + 205944 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGTAAGC s panTro5.chr4 192948026 37 + 194502333 ATCACCGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831677 37 + 195804263 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868883 37 + 4876863 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760119 37 + 115148730 ATCACTGTGTAGCTGAATAATTTGCTTTTTAGGAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043894 37 + 190429646 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986779 37 + 189454096 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378111 37 - 25927173 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407688 37 + 4669795 ATCACTGTGTAGCTGAATAATTTGTTTTTTAGGAAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364604 37 + 135778131 ACCACTGTGTAGCTGAATAATGTGATTTTTAGGAAGC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928547 37 + 2368649 ATCACTGTGTAGCTGAATAATGTGTTTTTTAGGAAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660651 37 - 190850796 ATCACTGTGTGGCTAAATAATCTGTTTTTTAGGAAGA i calJac3.chr3 C 0 I 299 s saiBol1.JH378165 13153485 37 - 14256875 GTTACTGTGTGGCTGAATAATTTGTTTTTTAGGAAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043913 36 - 2196201 GT-ACTGTGTGGCTGAATAATTTGTTTTTTAGGAAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431552 37 - 5030052 GTTACTGTGTGGCTGCATAATTTGTTTTTTAGGAAGC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546691 37 - 93316391 GTTACTGTGGAAGTGAATAATTTGTTTTGTAGCAAGC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280951 37 - 11315646 GTTACCGCCGTGCTGAATAATTTGTTTTGTAGGAAGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646535 37 - 129401213 ATCATTGCCTGGCTGAACAATTTGATATACAGGAAGC i mm10.chr8 C 0 C 0 s canFam3.chr16 16994124 37 - 59632846 GTCACTGTATAGCTGAATAAGTTGTTTTGTAGGAATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492465 37 - 2520184 GTCACTGTGTAGATGAATAATTTGTTTTGTAAGAAGC i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=666931.000000 s hg38.chr4_KI270789v1_alt 160906 48 + 205944 TAGCTCAAATTTATCATCAGTCATGAAAATGTTTT---ATCAATGCTCTTC s panTro5.chr4 192948063 48 + 194502333 TAGCTCAAATTTATCATCAGTCATGAAAATGTTTT---ATCAATACTCTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831714 48 + 195804263 TAGCTCAAATTTATCATCAGTCATGAAAATGTTTT---ATCAATACTCTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868920 48 + 4876863 TAGCTCAAATTGATCATCAGTCATGAAAATGCTTT---ATCAATGCTCTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760156 48 + 115148730 TAGCTCAAATTTATCATCAGTCATGAAAATGTTTT---ATCAATGCTCTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043931 48 + 190429646 TAGCTCAAATTTATCATCAGTCACGAAAATGTTTT---ATCAGTGCTCTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986816 48 + 189454096 TAGCTCAAATTTATCATCAGTCACGAAAATGTTTT---ATCAGTGCTCTAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378148 48 - 25927173 TAGCTCAAATTTATCATCAGTCACGAAAATGTTTT---ATCAGTGCTCTAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407725 48 + 4669795 TAGCTCAAATTTATCATCAGTCACAAAAATGTTTT---ATCAGTGCTCTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364641 48 + 135778131 TAGCTCAAATTTATCATCAGTCGTGAAAATGTTTT---ATCAGTGCTCTAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928584 47 + 2368649 TAGCTCAAATGTATCATCAGTCATG-AAACGTTTT---ATCAGTGCTCCAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189660987 48 - 190850796 TAGCTCAAATTTATCATCAATCATAAAAATAGTTT---ATCAATCCTCCTC i calJac3.chr3 I 299 C 0 s saiBol1.JH378165 13153522 48 - 14256875 TAGCTCAAATTTATCATCAGTCATGAAAATATTTT---ATCAATGCTCTTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043949 48 - 2196201 TAGCTCAAATTTATCATCAGTCATGAAAATATTTT---ATCAATGTTCTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431589 48 - 5030052 TAGCTCAAATTTATCATCAGTCATGAAAATATTTT---ATCAATGCTCTTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546728 48 - 93316391 CAGCTCAGATTTATCATCAGTCATGAAAACTTTTT---ATCAGCGCTCTTC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11280988 48 - 11315646 CAGCTCAAATTTATCATCAGTCATGAAAATATTTT---ATCAATGCCCTTC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646572 51 - 129401213 CAGCTCCAACTTATCATCCGTCATGAGCCTTTTTTTTAATCGATGctcttc i mm10.chr8 C 0 I 288 s canFam3.chr16 16994161 48 - 59632846 CAGCTCCAATGTATCATCAACCATAAAAATTCTTT---ATCAATGCTTTTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492502 44 - 2520184 ----TCAAATTTATCATCAGTCATGGAAATGTTTT---ATCAATGCTTTTC i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=20608.000000 s hg38.chr4_KI270789v1_alt 160954 2 + 205944 CA s panTro5.chr4 192948111 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831762 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868968 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760204 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043979 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986864 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378196 2 - 25927173 CA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407773 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364689 2 + 135778131 CA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928631 2 + 2368649 CA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661035 2 - 190850796 CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153570 2 - 14256875 CG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043997 2 - 2196201 CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431637 2 - 5030052 CA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546776 2 - 93316391 TA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11281036 2 - 11315646 TA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16994209 2 - 59632846 TA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492546 2 - 2520184 TG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86646623 288 - 129401213 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=667208.000000 s hg38.chr4_KI270789v1_alt 160956 55 + 205944 TAAAGCAGACATATTATTTTACTAGTTTCAGTTTAGCCCTGACAGAAACCTGATC s panTro5.chr4 192948113 55 + 194502333 TAAAGCAGACATATTATTTTACTAGTTTTAGTTTAGCTCTGACAGAAACCTGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831764 55 + 195804263 TAAAGCAGACATATTATTTTACTAGTTTCAGTTTAGCTCTGACAGAAACCTGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3868970 55 + 4876863 TAAAGCAGACATATTATTTTACTAGTTTCAGTTTAGCCCTGACAGAAACCTGATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760206 55 + 115148730 TAAAGCAGACATATTATTTTACTAGTTTCAGTTTAGCCCTGACAGAAACCTGATC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189043981 53 + 190429646 TAAATTAGAC--ATTATTTTACTAGTTTCAGTTCAGCCCTGACAGAAACCTGACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986866 53 + 189454096 TAAATTAGAC--ATTATTTTACTAGTTTCAGTTCAGCCCTGACAGAAACCTGACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378198 53 - 25927173 TAAATTAGAC--ATTATTTTACTAGTTTCAGTTCAGCCCTGACAGAAACCTGACG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407775 53 + 4669795 TAAAGTAGAT--ATTATTTTACTAATTTCAGTTTGGCCCTGACAGAAACCTGATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364691 53 + 135778131 TAAAGTAGAC--ATTATTTTACTAATTTCAGTTTAGCCCTGACAGAAACCTGATG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928633 53 + 2368649 TAAAGTAGAC--GTTATTTTACTAATTCCAGTTTAGCCCTGACAGAAACCTGACG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661037 55 - 190850796 TAAAGCAGACATATTATTATACTAGTTTCAGTTTAGTCCTGACAGAAACCTGATC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153572 55 - 14256875 TAAAGCAGACATATTATTATTCTAGTTTCACTTTAGTTCTGACAGGAACCTGATC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1043999 55 - 2196201 TAAAGCAGACATATTATTATTCCAGTTTCAGTTTAGTCCTGACAGAAACCTGATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431639 55 - 5030052 TAAAGCAGACATATTATTATTCTAGTTTCAGTTTAGTCCTGACAGAAACCTGATC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546778 55 - 93316391 CAAAGCAGCCATGTTATTATACTGGTTCCATTTTAGCTCTGTCAGAAAGCTGCTC i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11281038 55 - 11315646 CAAAGCAGCCATATTATTATACTCATTCCATTTTGGCTCTGACAGAAAGCTGATC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646911 55 - 129401213 taaagcagatatattattttactagtttcactttagctctggcAGAAAGCTTATC i mm10.chr8 I 288 C 0 s canFam3.chr16 16994211 55 - 59632846 TAAAGTAGGCCTGTTATTATATCAATTACACTTTAATTCTGACAGGAAATTGATC i canFam3.chr16 C 0 I 207 s dasNov3.JH570353 1492548 55 - 2520184 TAAAGCAGGTATATTATTATACTTGTTGCACTCTAGCTCTGACAGAAAGTTTATC i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=1565216.000000 s hg38.chr4_KI270789v1_alt 161011 131 + 205944 GGGAATACTATTATTAAGCCACAAATACCTGTTTT---------------------------AAAATATGTTGTCTTATGCTATTT-CATTGTATTATATTAATAATTCATGTAATA-TT---TCCTTTGGTTTTATTGTCTTCTGTGTTATAATTAAAACTG s panTro5.chr4 192948168 131 + 194502333 GGGAATACTATTATTAAGCCACAAATACCTGtttt---------------------------aaaatatgttgtcttatgctattt-cattgtattatattattaattcatgtaata-tt---tcctttggttttattgtcttctgtgttatAATTAAAACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831819 131 + 195804263 GGGAATACTATTATTAAGCCACAAATACCTGtttt---------------------------aaaatatgttgtcttatgctattt-cattgtattatattattaattcatgtaata-tt---tcctttggttttattgtcttctgtgttatAATTAAAACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869025 129 + 4876863 GGGAATACTATTATTAAGCCACAAATACTTGCTTT---------------------------AAAAtatgttgtcttatgctattt-cattgtattatattattaattcatgtaata-tt---tcctttggttttattgtcttctgtgttatAATTAAAAC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760261 131 + 115148730 GGGAATACTATTATTAAGCCATAAATACCTGTTTT---------------------------AAAATATGTTGTCTTATGCTATTT-CATTGTAGTATATTATTAATTCATGTAATA-TT---TCCTTTCATTTTATTGCCTTCTGTGTTATAATTAAAACTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044034 131 + 190429646 AGGAATACTATTATTAAGCCATAAATACCTGTTTT---------------------------AAAATATATTGTCTTATGCTATTT-CATTGTATTATATTATTAATTCATGTAATA-TT---ACCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAACTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187986919 131 + 189454096 AGGAATACTATTATTAAGCCATAAATACCTGTTTT---------------------------AAAATATATTGTCTTATGCTATTT-CATTGTATTATATTATTAATTCATGTAATA-TT---ACCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAACTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378251 131 - 25927173 AGGAATACTATTATTAAGCCATAAATACCTGTTTT---------------------------AAAATATATTGTCTTATGCTATTT-CATTGTATTATATTATTAATTCATGTAATA-TT---ACCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAACTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407828 131 + 4669795 GGGAATACTATTATTAAGCCATAAATACCTGTTtt---------------------------aaaatatattgtcttatgctattt-cattgtattatattatTAAGTCATGTATTA-TT---ACCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364744 134 + 135778131 GGGAATACTATTATTAAGCCATAAATACCTGTTtt---------------------------aaaatatattgtcttatgctattt-cattgtattatattatTAAGTCATGTACTA-TTATAACCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAATTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 928686 127 + 2368649 GGGAATACTATTATTAAGCCATAAATACCTGTTtt---------------------------aaaatatattgtctgatgctattt-cattgtattatattat----tcatgtaata-tt---aCCTTTGGTTTTAGTGTCTTCTGTGTTATAATTAAAATTG i colAng1.NW_012116221v1 C 0 I 308 s calJac3.chr3 189661092 129 - 190850796 AGGAATACTATTATTAAGCAATAAATACCTGTTTT---------------------------AAAATATACGGTCTCACGCTATTT-GAGTATATTATATTATGAATTCATGTAATA-TT---TACTTTAGTTTTAGTATCTTCTATGTTATAATTAAAGC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153627 128 - 14256875 AGGAATACTATTAGTAAACAATACATACCTGTTTA---------------------------AAAATATACTGTCTAATGCTATTT-TATTGTATTACATTATTAATTCACGTAATA-TT---TACTTTGGTTTTAGTATCTTCCGTGTTAT-ATTAAAAT-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044054 128 - 2196201 AGGAATATGATTAGTAAACAATACATACCCATTTA---------------------------AAAATATACTGTCTAATGCTGttt-tattgtattata-tattaattcatgtaata-tt---tactttggttttagtatcttctgtgttatAATTAAAAC-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431694 129 - 5030052 AGGAATACTATTAGTAAACAATACATACCCGTTTA---------------------------AAACTATACTGTCTAATGCtattt-tattgtattatattattaattcatgtaata-tt---tactttggttttagtatcttctgtgttatAATTAAAAC-- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546833 132 - 93316391 AGGAATGCTCGTATTAAGCTATTAATGCCTGTTTT---------------------------AAAATGTGTTCTCTTATGTTTTTTATGCTGTCTTGTATTATTAATTCATGTAATA-TT---TCCTTTGGCTTTAGTATCTTCTATATCATAATCAAAACTG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11281093 132 - 11315646 AGGAAAGCTATTATTAAGCCAAACATGCCTGTTTT---------------------------AAAATGCATTGTCATAGGTTTATGATGTTGTATTGTATTATTAATTCAGGTAATG-TG---TACTTTGGGTTTAGTGTCTTTTATGTCATAATCAAAACAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86646966 132 - 129401213 AGGAATGCTATTATTAAGCAATGCATGTCTATTAT---------------------------AAAATACCTTGTCTTCTATTGCCA-TATACAATTATAACATCAATTTATGCAAAAGTT---TCCTTTGGTTTTGGTATCCTCTATGTCACACCTAAAATTG i mm10.chr8 C 0 C 0 s canFam3.chr16 16994473 158 - 59632846 AGGAATGCTACTATGAAGCCATAAATACCTATTTTAAAATGTTCTGCCTCAAAAAAAAAAAAAAAATGTGCTGCCTCATGTTATTC-CACTGTATTGTATTATTGATTCATGTAATA-TT---TCCTTTGGTTTTAGTATCTTCTATGTCATAATCAAAACTG i canFam3.chr16 I 207 C 0 s dasNov3.JH570353 1492603 124 - 2520184 AGAAATGCTATTATTAAGCCATAAATGCCTCTTTT---------------------------AAAATATGTTGGTTCATGTTCTTG-TGCTGTATTGTATTA---ATGCATATAATA-TT---TCCTCTGGATTCAATGTC----ATGTCATAATCAAAACTG i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=22356.000000 s hg38.chr4_KI270789v1_alt 161142 2 + 205944 AA s panTro5.chr4 192948299 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831950 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869154 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760392 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044165 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987050 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378382 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407959 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134364878 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929121 2 + 2368649 AA i colAng1.NW_012116221v1 I 308 C 0 s calJac3.chr3 189661221 2 - 190850796 CA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153755 2 - 14256875 GA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044182 2 - 2196201 GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431823 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17546965 2 - 93316391 AA i micMur3.chr14 C 0 I 68 s otoGar3.GL873580 11281225 2 - 11315646 AA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647098 1 - 129401213 -G i mm10.chr8 C 0 I 1 s canFam3.chr16 16994631 2 - 59632846 AA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492727 2 - 2520184 AA i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=27432.000000 s hg38.chr4_KI270789v1_alt 161144 2 + 205944 AT s panTro5.chr4 192948301 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831952 2 + 195804263 AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869156 2 + 4876863 AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760394 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044167 2 + 190429646 AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987052 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378384 2 - 25927173 AT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3407961 2 + 4669795 AT i cerAty1.NW_012001672v1 C 0 I 324 s chlSab2.chr7 134364880 2 + 135778131 AT i chlSab2.chr7 C 0 I 310 s colAng1.NW_012116221v1 929123 2 + 2368649 AT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661223 2 - 190850796 AT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153757 2 - 14256875 AT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044184 2 - 2196201 AT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431825 2 - 5030052 AT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281227 2 - 11315646 CT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647100 2 - 129401213 AT i mm10.chr8 I 1 C 0 s canFam3.chr16 16994633 2 - 59632846 AT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492729 2 - 2520184 AT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e manLeu1.NW_012102221v1 2826280 5851 - 2847728 I a score=17290.000000 s hg38.chr4_KI270789v1_alt 161146 1 + 205944 A s panTro5.chr4 192948303 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831954 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869158 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760396 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044169 1 + 190429646 A i rheMac8.chr5 C 0 I 309 s macFas5.chr5 187987054 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378386 1 - 25927173 A i macNem1.NW_012013133v1 C 0 I 303 s cerAty1.NW_012001672v1 3408287 1 + 4669795 A i cerAty1.NW_012001672v1 I 324 C 0 s chlSab2.chr7 134365192 1 + 135778131 a i chlSab2.chr7 I 310 C 0 s manLeu1.NW_012102221v1 2832131 1 - 2847728 A i manLeu1.NW_012102221v1 I 5851 C 0 s colAng1.NW_012116221v1 929125 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661225 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153759 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044186 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431827 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281229 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647102 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16994635 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492731 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I a score=11849.000000 s hg38.chr4_KI270789v1_alt 161147 1 + 205944 A s panTro5.chr4 192948304 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831955 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869159 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760397 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987055 1 + 189454096 g i macFas5.chr5 C 0 I 306 s cerAty1.NW_012001672v1 3408288 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365193 1 + 135778131 a i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832132 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929126 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661226 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153760 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044187 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431828 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281230 1 - 11315646 A i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647103 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 16994636 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492732 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e macNem1.NW_012013133v1 24378387 303 - 25927173 I e rheMac8.chr5 189044170 309 + 190429646 I a score=6086.000000 s hg38.chr4_KI270789v1_alt 161148 1 + 205944 T s panTro5.chr4 192948305 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831956 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869160 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760398 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3408289 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365194 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832133 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929127 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661227 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153761 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044188 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431829 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281231 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647104 1 - 129401213 C i mm10.chr8 C 0 C 0 s canFam3.chr16 16994637 1 - 59632846 C i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492733 1 - 2520184 C i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e macNem1.NW_012013133v1 24378387 303 - 25927173 I e macFas5.chr5 187987056 306 + 189454096 I e rheMac8.chr5 189044170 309 + 190429646 I a score=23856.000000 s hg38.chr4_KI270789v1_alt 161149 2 + 205944 TT s panTro5.chr4 192948306 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831957 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869161 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760399 2 + 115148730 TT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987362 2 + 189454096 TT i macFas5.chr5 I 306 C 0 s macNem1.NW_012013133v1 24378690 2 - 25927173 TT i macNem1.NW_012013133v1 I 303 C 0 s cerAty1.NW_012001672v1 3408290 2 + 4669795 TT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365195 2 + 135778131 TT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832134 2 - 2847728 TT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929128 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661228 2 - 190850796 TT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153762 2 - 14256875 TT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044189 2 - 2196201 TT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431830 2 - 5030052 TT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281232 2 - 11315646 TC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647105 2 - 129401213 TC i mm10.chr8 C 0 C 0 s canFam3.chr16 16994638 2 - 59632846 TC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492734 2 - 2520184 TC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e rheMac8.chr5 189044170 309 + 190429646 I a score=713451.000000 s hg38.chr4_KI270789v1_alt 161151 59 + 205944 GGGAAATGTAATGTATATAG--CACACATCTAAAGTTCAGAGTGAGAATAAAACTACAACT s panTro5.chr4 192948308 59 + 194502333 GGGAAATGTAATGTATATAG--CACACATCTAAAGTTCAGAGTGAGAATAAAACTACAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192831959 59 + 195804263 GGGAAATGTAATGTATATAG--CACACATCTAAAGTTCAGAGTGAGAATAAAACTACAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869163 59 + 4876863 GGGAAATGTAATGTATATAG--CACACATCTAAAGTTCAGAGTGAGAATAAAACTACAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760401 59 + 115148730 GGGAAATGTAATGTATATAG--CACACATCTAAAGTTAAGAGTTAGAATAAACCTACAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044479 59 + 190429646 gggaaatgtaatgtatataa--catacatctaAAGTTGAGAGTTAGAATAAATCTACAACT i rheMac8.chr5 I 309 C 0 s macFas5.chr5 187987364 59 + 189454096 GGGAAATGTAATGTATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAATCTACAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378692 59 - 25927173 GGGAAATGTAATGTATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAATCTACAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408292 59 + 4669795 GGGAAATGTAATGCATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAACCTACAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365197 59 + 135778131 GGGAAATGTAATGCATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAACCTACAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832136 59 - 2847728 GGGAAATGTAATGCATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAACCTACAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929130 59 + 2368649 GAGAAATGTAATGTATATAA--CATACATCTAAAGTTGAGAGTTAGAATAAGCTTACAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661230 59 - 190850796 GGGAACTGTAATGTGCATAG--CATACATCCAAAGTTCAGAGTTAGAATTAACCTACAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153764 59 - 14256875 GGGAACTGTAATGTGTATAG--CGTACATCCAAAGTTCAGAGTTAGAATAAACCTACAACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044191 59 - 2196201 GGGAACTGTAATGTGTATAG--GATACATCCAAAGTTCAGAGTTAGAATAAACCTACAACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431832 59 - 5030052 GGGAACTGTAATGTGTATAG--CATACATCTAAAGTTCAGAGTCAGAATCAACCTACAACT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281234 61 - 11315646 TGGAAATGTAAAGTATGTAGAATATATATCTAAAGTTCGGAATCAGAACAAACCTACAACT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647107 57 - 129401213 TATATATGTGAAATGGATAC--TATCTAT-TAATGGTCAGGATAAAAATGGAATTACAAC- i mm10.chr8 C 0 C 0 s canFam3.chr16 16994640 59 - 59632846 TGAAAATATGAAGTGTAAAG--CATATATCTAAAGTCAAGGGTCAGGTAAAACCTACAACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492736 56 - 2520184 TGGAAATGTACAGTGTATAG--CCTATATCTAAAGTTCAGAATCGGAAAAAAACCAGA--- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I a score=832972.000000 s hg38.chr4_KI270789v1_alt 161210 105 + 205944 ATTTTATCTATTGCAATAGCTCAAATAGTAGAGTTTAACTATAATACTTGGTATACATATCAAACAAGGTATCTATACATACATTATTTTAATTTTACTC-CTCCC s panTro5.chr4 192948367 105 + 194502333 ATTTTATCTATTGCAATAGCTCAAATAGTAGAGTTTAACTATAATACTTGGTATACATATCAAACAAGGTATCTATACATACATTATTTTAATTTTACTC-CTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832018 105 + 195804263 ATTTTATCTATTGCAATAGCTCAAATAGTAGAGTTTAGCTATAATACTTGGTATACATATCAAACAAGGTATCTATACATACATTATTTTAATTTTACTC-CTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869222 105 + 4876863 ATTTTATCTATTGCAATAGCTCAAATAGTAGAGTTTAACCATAATACTTGTTATACATATCAAACAAGGTATCTATACATACATTATTTTAATTTTACTC-CTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760460 106 + 115148730 ATTTTATCTATTGCAATAGCTCAAATAGTAGAGTTTAACTATAACATTTGGTATACATATCAAACAAGGTATCTATACATACATTATTTTAATTTTACTCTCTCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044538 105 + 190429646 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTATACATATGAAACAAGGTATCTATATATGTATTATTTTAATTTTACCC-CTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987423 105 + 189454096 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTATACATATGAAACAAGGTATCTATATATGTATTATTTTAATTTTACCC-CTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378751 105 - 25927173 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTATACATATGAAACAAGGTATCTATATATGTATTATTTTAATTTTACCC-CTTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408351 105 + 4669795 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTATACATATGAAACAAGGTATCTATACATGTATTATTTTAATTTGACCC-ctccc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365256 104 + 135778131 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTACACCTATGAAACAAGGTATCTATACATGTATTATTTTAATTTTA-CC-ctccc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832195 105 - 2847728 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTGAACTATAATATTTGGTATACATATGAAACAAGGTATCTATACATGTATTATTTTAATTTTACCC-ctccc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929189 105 + 2368649 ATTTTATGTATTTCTATAGCTCAAATAGTAGAGTTAAACTATAATATTTGGTATACATATGAAACAAGGTATCTATACATGTATTATTTTAATTTTACCC-ctccc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661289 104 - 190850796 ATTTTATCTATTGCAATAGCTCAAATAGTAGATTTTAA-TATAATATTTGATACACATATCAAACAAGGTCTCTATACATATATTATTTTAATTTTACCC-CTCCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153823 105 - 14256875 ATTTTATCTATTGCAATAGCTCAACTAGTAGATTTTAACTATAATATTTGATACACATATCAAACAAGGTCTCTATACATATATTATTTCAATTTTACCC-ctccc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044250 105 - 2196201 ATTTTATCTATTGCAATAGCTCATATAGTAGATTTTAACTATAATGTCTGATACACATATCAAACAAGGTCTCTATACATATGTTATTTTAATTTTACCC-CTCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431891 105 - 5030052 ATTTTATCTATTGCAATAGCTCAAATAGTAGATTTTAACTATAATCTTTGATACACATATCAAACAAGGTCTCTATACTTATATTATTTTAATTTTACCC-ctccc i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86647164 17 - 129401213 -------------------------------------------ATAATTTGTATAAATAT---------------------------------------------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16994699 10 - 59632846 -----------------------------------------TAATGTGTAA------------------------------------------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492792 19 - 2520184 ---------------------CAAGT------------------TAATTGGCATACTT------------------------------------------------ i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e otoGar3.GL873580 11281295 0 - 11315646 C a score=107390.000000 s hg38.chr4_KI270789v1_alt 161315 24 + 205944 TCAT--------TTTCTCTCC-------------ACGTCCCATCA s panTro5.chr4 192948472 24 + 194502333 TCAT--------TTTCTCTCC-------------ATGCCCCATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832123 24 + 195804263 TCAT--------TTTCTCTCC-------------ATGCCCCATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869327 24 + 4876863 TCAT--------TTTCTCTCC-------------ACGCCCCGTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760566 24 + 115148730 TCAT--------TTTCTCTCC-------------ACCCCCCGGCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044643 35 + 190429646 TCAT--------TTtctctcc--ctctctctctctctctctgtct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987528 37 + 189454096 TCAT--------TTtctctccctctctctctctctctctctgtct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378856 35 - 25927173 TCAT--------TTtctctcc--ctctctctctctctctctgtct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408456 31 + 4669795 tcat--------tttctcttc------ctctctctctctctgtct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365360 31 + 135778131 tcat--------tttctctcc------ctctctctctctctgtct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832300 31 - 2847728 tcat--------tttctctcc------ctctctctctctctgtct i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929294 35 + 2368649 tcat--------ttcctctcc--ccctctctctctctctctgtct i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661393 23 - 190850796 TCCT--------TCTCTCTCC--------------CTCTCTGTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153928 31 - 14256875 tccttctctctctctctctct--------------ctctctgtct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044355 23 - 2196201 ACCT--------TCTCTTTCT--------------CTCTCTGCCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3431996 23 - 5030052 tcct--------tctctctct--------------ctctctgtct i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281295 7 - 11315646 TCAT--------TTG------------------------------ i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17546967 68 - 93316391 I e dasNov3.JH570353 1492811 0 - 2520184 C e canFam3.chr16 16994709 0 - 59632846 C e mm10.chr8 86647181 0 - 129401213 C a score=2158797.000000 s hg38.chr4_KI270789v1_alt 161339 162 + 205944 CATAAATATGCACAAATTTAACTGGCCAGAGGTGAC----CTACATTCTCT------A-CATGCAGTGTCCATGATGAAG-ATAGCAACTG----TATTTGCTAAGGTTTTCACAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATGGACattcattgattaatctaatatttattgaa s panTro5.chr4 192948496 162 + 194502333 CATAAATATGCACAAATTTAACTGGCCAGAGGTGAC----CTACATTCTCT------A-CATGCAGTGTCCACGATGAAG-ATAGCAACTG----TATTTGCTAAGGTTTTCACAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATGGACattcattgattaatctaatatttattgaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832147 162 + 195804263 CATAAATATGCACAAATTTAACTGGCCAGAGGTGAC----CTACATTCTCT------A-CATGCAGTGTCCACGATGAAG-ATAGCAACTG----TATTTGCTAAGGTTTTCACAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATGGACattcattgattaatctaatatttattgaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869351 162 + 4876863 CATAAATATGCACAAATTTAACTGGCCAGAGGTGAC----CTACATTCTCT------C-CATGCAGTGTCCACGATGCAG-ATAGCAACTG----TATTTGCTAAGGTTTTCACAGTT--CATA--AC--A--GTGAAATAAAATGTAGTTATGGAAattcattgattaatctaatatttattgaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760590 162 + 115148730 CATAAATATGCAAAAATTTAACTGGCCAGAGGTGAC----CTACATTCACT------A-CACGCAGTGTCCACGATGCAG-ATGGCAATTG----TATTTGCTAAGGTTTTTATAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaaaatttattgaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044678 162 + 190429646 cATAAATACACACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCT------A-CACACAATGTCCATGATGCTG-AGAGCAAGTG----TAATTGCTAAGGGTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttattgaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987565 162 + 189454096 cATAAATACACACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCT------A-CACACAATGTCCATGATGCTG-AGAGCAAGTG----TAATTGCTAAGGGTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttattgaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24378891 162 - 25927173 cATAAATACACACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCT------A-CACACAATGTCCATGATGCTG-AGAGCAAGTG----TAATTGCTAAGGGTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttattgaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408487 162 + 4669795 cATAAATATGCACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCT------A-CACACAATGTCCGTGATGCTG-AGAGCAAGTG----TAATTACTAAGGTTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttattgaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365391 161 + 135778131 cATAAATATGCACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCT------A-CACACAATGTCCATGATGCTG-AGAGC-AGTG----TAATTACTAAGGTTTTCCCAGTT--CACA--AC--A--GTGAAATAAAATGTAGCTATAGACattcaatcattaatctaatatttattgaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832331 162 - 2847728 cATAAATATGCACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTCC------A-CACACAATGTCCATGATGCTG-AGAGCAAGTG----TAATTACTAAGGTTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttattgaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929329 162 + 2368649 cATAAATATGGACAAATTTAACTGCCCAGAAGTGAC----CTACATTCTGT------A-CACACAATGTCCATGATGCTG-AGAGCAAGTG----TAATTGCTAAGGTTTTCCCAGTT--CATA--AC--A--GTGAAATAAAATGTAGCTATAGACattcattcattaatctaatatttgttgaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661416 160 - 190850796 CATAAATATGCACGAATTTAACTGACCAGAAGTGAC----CTACATTCTCT---------ACACAGTGTCCATGATGCTG-ATAGCAATTG----TACTTGCTAAGGTTTTCACAGTT--CGCA--AC--A--GTGAAATCAAATGTGACTGTAGACattcatgtattaatctaatatttactgag i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13153959 160 - 14256875 cATAAATATGCACAAATTTAACTGGCCAGAAGTGAC----CTACATTCTCT------A-CACACAGTGTCCACGATGCTG-ATAGCAATTG----TATTTGCTAAGGTTTTCACAGTT--CATA--AC------TGAAATAAAATGTAACTATAGACattcatttattaatctaatatttattgat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044378 162 - 2196201 CATAAATATGCACAAATTTAACTGGCCAGAAGTGAC----CTACATTCTCT------A-CACACAGTGTCCACGATGTTG-ATAGCAATTG----TATTTGCTAAGGTTTTCACAGTT--AATA--AA--A--GTGAAATAAAATGTAACTATAGACattcatttattaatctaatatttattgag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432019 162 - 5030052 cATAAATATGCACAAATTTAACTGGCCAGAAGTGAC----CTACATTCTCT------A-TACACAGTGTCCACGATGCTG-ATAGCAATTG----TATTTGCTAAGGTTTTCATAGTT--CATA--AC--A--GTGAAATAAAATGTAACTATAGACattcatttattaatctaatatttattgag i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17547035 163 - 93316391 CATAAATATGTACAAATTTAATGGGGCAGAAATAAC----TTACATTTGCT------A-CGTGCAATGTCCACAATGCTG-ATGGCAATTG----TATTTGCTAAGGTTTTCACAGTT--CGGAGCAC--A--GTGAGGTAAAATGTGACTATAGACA-ttatttattaatccagtatttattgaa i micMur3.chr14 I 68 I 597 s otoGar3.GL873580 11281302 169 - 11315646 CATAAACATGTGCAAATTTAACTGGGAAGAAGTAAC----CTGTATTCACCAGAATAA-CCTGTATTGTTCACAATGCTG-AGAGCAATTG----TATTTGCTAAGGTTTATAGAGTT--AATCACAC--A--GTGAGATAAAGTGTAACTACAGGCA-TCATGCATTAGTACAATATTTACTGAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647181 154 - 129401213 -----------ATAAACTTAGCAAGACAGATAGGAC----TTGCATGTACT------AGCACACAAAGTACACAGTGCTG-GCAGCAATCT----TATTTGCCAACATATTCACAGTT--TGCA--ACATA--ATGGTATAAAATATAACTATAGACAGATATTCATGAGTGTAATGTTTATTGAG i mm10.chr8 C 0 I 5 s canFam3.chr16 16994709 170 - 59632846 ---AAATACCTACAAATTGCACTGGACAGAAGTGACCATGCAATATTCACT------A-CATGCAATATTTCCAATGCCGAACAGCCATTGTGTTTGTTTGCCAGGATATTCACAGTT--TATA--AT--ATGGTGAGATAAAATGTAATTGTAGATatttattcatcaatgcaatatttattaaa i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492811 156 - 2520184 -----------ACAAATTTAACTGGACAGAAATGACCTT-CTACATTTGCT------A-TATGCAATATCCAGAATGCTG-ACAGCAACTG----TATTTGCCAAGATATTCACAGTTCACATA--GT--G--GTGGGATAAATTGTAACTACTGCTattcatttatttacccaatatttattgag i dasNov3.JH570353 C 0 C 0 a score=1514581.000000 s hg38.chr4_KI270789v1_alt 161501 136 + 205944 ggtgtatttgttagattcc-gtgatacaatgatgaacaa--gtcattgtgtaatcatgaa--gagcttctagccaagtgggtaaaaagataaggaaaTCATCCCAATTAGTGAGATAAACTACAAGATAGGGAA--TCATTCC s panTro5.chr4 192948658 136 + 194502333 cgtgtatttgttagattcc-gtgatacaatgatgaacaa--gtcattgtgtaatcatgaa--gagcttctagccaagtgggtaaaaagataaggaaaTCATCCCAATTAGTGAGATAAACTGCAAGATAGGGAA--TCATTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832309 136 + 195804263 cgtgtatttgttagattcc-gtgatacaatgatgaacaa--gtcattgtgtaatcatgaa--gagcttctagccaagtgggtaaaaagataaggaaaTCATCCCAATTAGTGAGATAAACTGCAAGATAGGGAA--TCATTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869513 136 + 4876863 cgtgtattcgttagattcc-gtgatacaatgatgaacaa--gtcattgtgtaatcatgaa--gagcttatagccaagtgggtaaaaagataaggaaaTCATTCCAATTAGTGAGATAAACTACAAGATAGGGAA--TCATTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760752 136 + 115148730 cgtgtatttgttagatcct-gtgatacaatgatgaacaa--ctcattgtgtaatcatgaa--gagcttatagccaagtgggtacaaagataagcaaataatcccaattagtgagataaagtacaagacagggAA--TCATTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044840 134 + 190429646 tgtgtatttgttagatccc-atgatatatggatgagcaa--gtcattgcgtattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataatcccaattagtgagataaagt--aagacagggAA--TCACTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987727 134 + 189454096 tgtgtatttgttagatccc-atgatatatggatgagcaa--gtcattgcgtattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataatcccaattaGTGAGATAAAGT--AAGACAGGGAA--TCACTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379053 134 - 25927173 tgtgtatttgttagatccc-atgatatatggatgagcaa--gtcattgcttattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataatcccaattagtgagataaagt--aagacagggAA--TCACTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408649 135 + 4669795 tgtgtatttgttagatccc-atgatatatggatgagcaa--gtcattgcgtattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataATCCC-ATTAGTGAGATAAAGTACAAGACAGGGAA--TCACTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365552 132 + 135778131 tgtgcatttgttagatccc-atgatatatggatgagcaa--gtcactgcgtattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataATCC----TAGTGAGATAAAGTACAAGACAGGGAA--TCGCTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832493 136 - 2847728 tgtgtatttgttagatccc-atgatatatggatgagcaa--gtcattgcatattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataatcccaattagtgagataaagtacaagacaggGAA--TCACTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929491 136 + 2368649 tgtgtatttgttagatccc-atgatatatggataagcaa--gtcattgtatattcatgag--gagcttatagccaagtgggtacaaagacaagcaaataatcccaattaGTGAGATAAAGTACAAGACAAGGAA--TCACTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661576 132 - 190850796 tgtgtatttgttagatccc-atgatatactgatgaacaa--gtcattgtgtattcatgag--aagcttatagcccagtggctgcaaaggtaagcaaataattccaCTTA---AGATAAACTACGAGATAGCAAA--GCATTC- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154119 136 - 14256875 tgtgtatttgttagatccc-atgacatattgatgaacaa--gtcattgtgtattcatgag--gagcttatagccaagtggctacaaatataagcaaataattccaattagtgagaaaaactacaatATAGGAAA--TCATTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044540 136 - 2196201 tgtgtatttgttagatccc-atgatatattgatgaacaa--gtcattgtgtattcatgag--gagcttatagccaagtggctacaaagataagcaaataattccaattagcgagataaactacaagataggaaa--tcattct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432181 136 - 5030052 tgtgtatttgttagatcct-atgatatattgatgaacaa--gtcattgtgtattcatgag--gagcttatagccaagtggctacaaagataagcaaataattccaatTAGTGAGATAAACTACAAGATAGGAAA--TCATTCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281471 133 - 11315646 CACATATTTACCAGATCCT-AAGATGTATTAATGACCGT--GTCA-TGTGCACTCATGAGGAGAGCTTATAGCCAA--TGGTACAAAGATAAG----TAACTCCAATTAGTGAAATAAACTGTAAGTTAGGGAACTTCATTCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647340 129 - 129401213 CAT-TATCATTTAGATCCTAAAGATATATAAATTAACAA--GTCATGGTGTAGACATGTG------TTATCACCAAGTGGGAACACAGAGAAGCAAATGGTTCCAATTCCTGAAATAAATTACAG---AGGGAT--TTTTTTC i mm10.chr8 I 5 I 79 s canFam3.chr16 16994879 130 - 59632846 catgcatttctcagatcat-aagatatactgatgaacacttgttattatgtactcataag--gagcctacagtcaggtgggaacaaaaataag----taaTTCTAATTTGTGAGATAAATTAT----CAGGGAT--TTATTCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1492967 136 - 2520184 --cacatagtttacatcct-gagatataataataaacaatagtcattctctccttataag--gaagggatggtcaagtagaaacagagagaagtcattacttctcgttagtgagataaactataaaatagggat--ttatcca i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I a score=422033.000000 s hg38.chr4_KI270789v1_alt 161637 42 + 205944 GTGTGTTACCAGCACAT-TCTAC-CCACGCTGTATTTTTCAGGG s panTro5.chr4 192948794 42 + 194502333 GTGTGTTACCGGCACAT-TCTAC-CCACGGTGTATTTTTCAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832445 42 + 195804263 GTGTGTTACCGGCACAT-TCTAC-CCACGGTGTATTTTTCAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869649 42 + 4876863 GTGTGTTACCGGCACAT-TCTAC-CCACGCTGTATTTTTCAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760888 42 + 115148730 GTGTGTTACCGGCACAG-TCTAC-CCACGCTGTATTTTTCAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189044974 42 + 190429646 GTGTGTTACCAGCACAC-TCTAC-CCGCGCTGTATTTTTCAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987861 42 + 189454096 GTGTGTTACCAGCACAC-TCTAC-CCGCGCTGTATTTTTCAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379187 42 - 25927173 GTGTGTTACCAGCACAC-TCTAC-CCGCGCTGTATTTTTCAGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3408784 42 + 4669795 GTGTATTACCAGCACAC-TCTAC-CCACGCTGTATTTTTCAGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365684 40 + 135778131 GTGTGTTACCAGCACAC-TCTAC-CCGCGCTGTATTTTTCAG-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832629 42 - 2847728 GTGTGTTATCAGCACAC-TCTAC-CCGCGCTGTATTTTTCAGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929627 42 + 2368649 GTGTGTTACCAGCACAC-TCTAC-CCGCGCTGTATTTCTCAGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661708 42 - 190850796 -TGTGTCCCCAGCACACTTCTAC-CCATGCTGCAGCTTTCAGGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154255 43 - 14256875 GTGTGTTACCAGCACACTTTTAC-CCATGCTGCTGTTTTCGGGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1044676 43 - 2196201 gtgtgttagcagcacacttttac-ccacgctgcagttttcaggg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432317 43 - 5030052 GTGTGTTACCAGCACACTTTCAC-CCATGCTGCAGTTTTCAGGG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281604 41 - 11315646 GTATGTTACTGGC-CAC-CTGCC-CCAGTCTGTGACTTTCAAGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995009 42 - 59632846 GGATACCAGTGGCACAC-CTTACACCCAGCTCTATTTTTCAGG- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1493103 42 - 2520184 gactgctattggcacac-tttat-ccaacctgtgtttttcagag i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I a score=22737.000000 s hg38.chr4_KI270789v1_alt 161679 4 + 205944 -AAAG s panTro5.chr4 192948836 4 + 194502333 -AAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832487 4 + 195804263 -AAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869691 4 + 4876863 -AAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760930 4 + 115148730 -AAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987903 4 + 189454096 -AAAG i macFas5.chr5 C 0 T 8 s cerAty1.NW_012001672v1 3408826 4 + 4669795 -AAAG i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832671 4 - 2847728 -AAAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929669 4 + 2368649 -AAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661750 4 - 190850796 -AAAG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1044719 4 - 2196201 -aaag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432360 4 - 5030052 -AAAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281645 3 - 11315646 --AAG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995051 4 - 59632846 -AAAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1493145 3 - 2520184 caa-- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e saiBol1.JH378165 13154298 0 - 14256875 C e chlSab2.chr7 134365724 0 + 135778131 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e rheMac8.chr5 189045016 0 + 190429646 C a score=9100.000000 s hg38.chr4_KI270789v1_alt 161683 1 + 205944 G s panTro5.chr4 192948840 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832491 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869695 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760934 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3408830 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832675 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929673 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661754 1 - 190850796 G i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1044723 1 - 2196201 g i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432364 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281648 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995055 1 - 59632846 G i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1493148 1 - 2520184 g i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e saiBol1.JH378165 13154298 0 - 14256875 C e chlSab2.chr7 134365724 0 + 135778131 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C a score=6529.000000 s hg38.chr4_KI270789v1_alt 161684 3 + 205944 TGG s panTro5.chr4 192948841 3 + 194502333 TGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832492 3 + 195804263 TGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869696 3 + 4876863 TGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760935 3 + 115148730 TGG i nomLeu3.chr7b C 0 I 471 s colAng1.NW_012116221v1 929674 3 + 2368649 TGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661755 3 - 190850796 TAT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1044724 3 - 2196201 tat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432365 3 - 5030052 TAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281649 3 - 11315646 TAT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995056 2 - 59632846 -GG i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1493149 3 - 2520184 tgt i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C a score=7700.000000 s hg38.chr4_KI270789v1_alt 161687 2 + 205944 TG s panTro5.chr4 192948844 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832495 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869699 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761409 2 + 115148730 TG i nomLeu3.chr7b I 471 C 0 s colAng1.NW_012116221v1 929677 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 T 10 s calJac3.chr3 189661758 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1044727 2 - 2196201 tg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432368 2 - 5030052 TG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11281652 2 - 11315646 TA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995059 2 - 59632846 TA i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1493152 2 - 2520184 ca i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C a score=98438.000000 s hg38.chr4_KI270789v1_alt 161689 30 + 205944 TACATTACCTGATGTCTAAATAGGAGGTAA s panTro5.chr4 192948846 30 + 194502333 TACATTACCTGATATCTAAATAGGAGGTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832497 30 + 195804263 TACATTACCTGATATCTAAATAGGAGGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869701 30 + 4876863 TACATTACCTGATGTCTAAATAGGAGGTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761411 30 + 115148730 TAGATTACCTGATGTCCAAATAGGAGGTAA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189661760 30 - 190850796 TAGATTCCATGGTGTCCAGATAGGAGGTAA i calJac3.chr3 C 0 I 1 s cebCap1.NW_016107886v1 1044729 30 - 2196201 tagattacatgatgtccaaataggaggtaa i cebCap1.NW_016107886v1 C 0 I 1809 s aotNan1.NW_018492112v1 3432370 30 - 5030052 TAGATTACATGATATCTAAATAGGAAGTAA i aotNan1.NW_018492112v1 C 0 I 356 s otoGar3.GL873580 11281654 30 - 11315646 AAGGTTAAGTGATGTCCATGTAGGAGGTAA i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16995061 30 - 59632846 AAGATCAAGTGATATTCAAGTAGGACCTAA i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1493154 30 - 2520184 aaaattccatgatgtctaagtagaagctaa i dasNov3.JH570353 C 0 I 2 e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929679 10 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C a score=14920.000000 s hg38.chr4_KI270789v1_alt 161719 12 + 205944 AAGCATAAGGTG s panTro5.chr4 192948876 12 + 194502333 TAGCATAAGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832527 12 + 195804263 TAGCATAAGGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869731 12 + 4876863 TAGCATAGGGTG i gorGor5.CYUI01015356v1 C 0 I 139 s nomLeu3.chr7b 112761441 12 + 115148730 CAGCATAAGGTC i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11281685 12 - 11315646 TGTCATGAGGCT i otoGar3.GL873580 I 1 I 1 s canFam3.chr16 16995093 12 - 59632846 AGGCATGAGGTC i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1493186 12 - 2520184 aggtgtaaagta i dasNov3.JH570353 I 2 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929679 10 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C a score=5790.000000 s hg38.chr4_KI270789v1_alt 161731 5 + 205944 CTGGG s panTro5.chr4 192948888 5 + 194502333 CTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832539 5 + 195804263 CTGGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761453 5 + 115148730 CTGGA i nomLeu3.chr7b C 0 C 0 s otoGar3.GL873580 11281698 5 - 11315646 TTGCG i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16995105 5 - 59632846 CTAGA i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1493198 5 - 2520184 ctgga i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929679 10 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e macFas5.chr5 187987907 8 + 189454096 T e rheMac8.chr5 189045016 0 + 190429646 C e gorGor5.CYUI01015356v1 3869743 139 + 4876863 I a score=1758.000000 s hg38.chr4_KI270789v1_alt 161736 4 + 205944 AGAC s panTro5.chr4 192948893 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832544 4 + 195804263 AGAC i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761458 4 + 115148730 AGAC i nomLeu3.chr7b C 0 T 532 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 8 C 0 s otoGar3.GL873580 11281703 3 - 11315646 -GTC i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 16995112 2 - 59632846 AG-- i canFam3.chr16 I 2 I 1 s dasNov3.JH570353 1493203 4 - 2520184 agag i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929679 10 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365724 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379229 0 - 25927173 C e rheMac8.chr5 189045016 0 + 190429646 C e gorGor5.CYUI01015356v1 3869743 139 + 4876863 I a score=36256.000000 s hg38.chr4_KI270789v1_alt 161740 10 + 205944 AAAGGAGTTG s panTro5.chr4 192948897 10 + 194502333 AAAGGTGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832548 10 + 195804263 AAAGGTGTTG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112760930 10 + 115148730 AAAGGTGGTG i nomLeu3.chr7b T 532 C 0 s rheMac8.chr5 189045016 10 + 190429646 AAAGGTGTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987903 10 + 189454096 AAAGGTGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 10 - 25927173 AAAGGTGTTG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365724 10 + 135778131 AAAGGTGTTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929669 10 + 2368649 AAAGGTGTTG i colAng1.NW_012116221v1 T 10 C 0 s otoGar3.GL873580 11281707 10 - 11315646 AGGGGGGTCT i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 16995115 9 - 59632846 GAGGGTGTG- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1493207 10 - 2520184 aaaggcgttc i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3869743 139 + 4876863 I a score=16646.000000 s hg38.chr4_KI270789v1_alt 161750 3 + 205944 TAG s panTro5.chr4 192948907 3 + 194502333 TAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832558 3 + 195804263 TAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869882 3 + 4876863 TAG i gorGor5.CYUI01015356v1 I 139 C 0 s nomLeu3.chr7b 112760940 3 + 115148730 TAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045026 3 + 190429646 TAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987913 3 + 189454096 TAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379239 3 - 25927173 TAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365734 3 + 135778131 TAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929679 3 + 2368649 TAG i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11281717 3 - 11315646 TGG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995124 3 - 59632846 CGG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1493217 3 - 2520184 cag i dasNov3.JH570353 C 0 I 334 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C a score=8447.000000 s hg38.chr4_KI270789v1_alt 161753 2 + 205944 AT s panTro5.chr4 192948910 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832561 2 + 195804263 AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869885 2 + 4876863 AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760943 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045029 2 + 190429646 AT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987916 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379242 2 - 25927173 AT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365737 2 + 135778131 AT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929682 2 + 2368649 AT i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11281720 2 - 11315646 TT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 16995127 2 - 59632846 GT i canFam3.chr16 C 0 I 26 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C a score=6851.000000 s hg38.chr4_KI270789v1_alt 161755 2 + 205944 TA s panTro5.chr4 192948912 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832563 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869887 2 + 4876863 TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760945 2 + 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045031 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987918 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379244 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365739 2 + 135778131 TA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929684 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11281722 2 - 11315646 CA i otoGar3.GL873580 C 0 I 393 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C a score=348735.000000 s hg38.chr4_KI270789v1_alt 161757 95 + 205944 CCTGATATCCAAATAGGAGGAAATAGCATAAGGGCATGGAAGAGAGAGGGGTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCGTAAGGTC s panTro5.chr4 192948914 95 + 194502333 CCTGATATCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAGGGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832565 95 + 195804263 CCTGATATCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAGGGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869889 95 + 4876863 CCCGATGTCCAGATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTC i gorGor5.CYUI01015356v1 C 0 T 241 s nomLeu3.chr7b 112760947 95 + 115148730 CCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGACAGGGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATGAGGTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045033 95 + 190429646 CCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987920 95 + 189454096 CCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379246 95 - 25927173 CCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365741 95 + 135778131 CCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGGGTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929686 95 + 2368649 CCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=8595.000000 s hg38.chr4_KI270789v1_alt 161852 2 + 205944 CT s panTro5.chr4 192949009 2 + 194502333 CT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832660 2 + 195804263 CT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869743 2 + 4876863 CT i gorGor5.CYUI01015356v1 T 241 C 0 s nomLeu3.chr7b 112761042 2 + 115148730 CT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045128 2 + 190429646 CT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988015 2 + 189454096 CT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379341 2 - 25927173 CT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365836 2 + 135778131 CT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929781 2 + 2368649 CT i colAng1.NW_012116221v1 C 0 T 114 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6408.000000 s hg38.chr4_KI270789v1_alt 161854 3 + 205944 GGG s panTro5.chr4 192949011 3 + 194502333 GGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832662 3 + 195804263 GGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869745 3 + 4876863 GGG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045130 3 + 190429646 GGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988017 3 + 189454096 GGA i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379343 3 - 25927173 GGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365838 3 + 135778131 GGG i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929783 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761044 0 + 115148730 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=10152.000000 s hg38.chr4_KI270789v1_alt 161857 3 + 205944 AGA s panTro5.chr4 192949014 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832665 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869748 3 + 4876863 AGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761044 3 + 115148730 AGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045133 3 + 190429646 AGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987899 3 + 189454096 AGA i macFas5.chr5 T 121 I 1 s macNem1.NW_012013133v1 24379346 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365841 3 + 135778131 AGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929783 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=375.000000 s hg38.chr4_KI270789v1_alt 161860 1 + 205944 C s panTro5.chr4 192949017 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832668 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869751 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761047 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134365844 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929783 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987902 1 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19342.000000 s hg38.chr4_KI270789v1_alt 161861 5 + 205944 AAAGG s panTro5.chr4 192949018 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832669 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869752 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761048 5 + 115148730 AGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 5 + 190429646 AAAGG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 5 + 189454096 AAAGG i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24379229 5 - 25927173 AAAGG i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365845 5 + 135778131 AGAGG i chlSab2.chr7 C 0 T 121 s colAng1.NW_012116221v1 929669 5 + 2368649 AAAGG i colAng1.NW_012116221v1 T 114 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=271994.000000 s hg38.chr4_KI270789v1_alt 161866 122 + 205944 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCAAGGAAGAGAGAGGGCTGTAGATTACCTGATGTCCAAATAGTAGGTAATATCATAAGGTGCTGGAAGAGAGAGGG s panTro5.chr4 192949023 122 + 194502333 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCAAGGAAGAGAGAGGGCTATAGATTACCTGATGTCCAAATAGTAGGTAATATCATAAGGTGCTGGAAGAGAGAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832674 122 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCAAGGAAGAGAGAGGGCTATAGATTACCTGATGTCCAAATAGTAGGTAATATCATAAGGTGCTGGAAGAGAGAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869757 122 + 4876863 TGTTGTAGATTACCTGATATCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAGGGCTATAGATTACCTGATGTCCAAATAGTAGGTAATATCATAAGGTGCTGGAAGAGAGAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761053 120 + 115148730 -GTTGTAGATTACCTGATGTCCAAGTAGGAGGTAATCACATAAGGTCCTGGAAGAGAGAGGGCTGTAGATGACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAGAAGGC- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045021 62 + 190429646 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGG------------------------------------------------------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987908 62 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGG------------------------------------------------------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379234 62 - 25927173 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGG------------------------------------------------------------ i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365729 122 + 135778131 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGGGTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGACAGAGGG i chlSab2.chr7 T 121 T 127 s colAng1.NW_012116221v1 929674 122 + 2368649 TGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAGAGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=600.000000 s hg38.chr4_KI270789v1_alt 161988 1 + 205944 C s panTro5.chr4 192949145 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832796 1 + 195804263 C i panPan2.chr4 C 0 I 3 s gorGor5.CYUI01015356v1 3869879 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929796 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379296 0 - 25927173 C e macFas5.chr5 187987970 0 + 189454096 C e rheMac8.chr5 189045083 0 + 190429646 C e nomLeu3.chr7b 112761173 0 + 115148730 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4249.000000 s hg38.chr4_KI270789v1_alt 161989 2 + 205944 TT s panTro5.chr4 192949146 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869880 2 + 4876863 TT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761173 1 + 115148730 -T i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 189045083 2 + 190429646 TT i rheMac8.chr5 C 0 I 1 s macFas5.chr5 187987970 2 + 189454096 TT i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24379296 2 - 25927173 TT i macNem1.NW_012013133v1 C 0 I 1 s colAng1.NW_012116221v1 929796 2 + 2368649 TT i colAng1.NW_012116221v1 C 0 T 119 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192832797 3 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=130650.000000 s hg38.chr4_KI270789v1_alt 161991 46 + 205944 TAGATTACCCGATGTCCAGATAGGAGGTAGTAGCATAAGGTCCTGG s panTro5.chr4 192949148 46 + 194502333 TAGATTACCCGATGTCCAAATAGGAGGTAGTAGCATAAGGTCCTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832800 46 + 195804263 TAAATTACCCGATGTCCAAATAGGAGGTAATAGTATAAGGTCTTGG i panPan2.chr4 I 3 I 300 s gorGor5.CYUI01015356v1 3869882 46 + 4876863 TAGATTACCCGATGTCCAGATAGGAGGTAATAGCATAAGGTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761175 46 + 115148730 TAGATTACCTGATGTTCAAATAGGAGGTAATAGCATAAGATACAAG i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 189045086 46 + 190429646 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGG i rheMac8.chr5 I 1 C 0 s macFas5.chr5 187987973 46 + 189454096 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGG i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24379299 46 - 25927173 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGG i macNem1.NW_012013133v1 I 1 C 0 s colAng1.NW_012116221v1 929679 46 + 2368649 TAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGG i colAng1.NW_012116221v1 T 119 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=40280.000000 s hg38.chr4_KI270789v1_alt 162037 12 + 205944 AAGAGAGAGGGT s panTro5.chr4 192949194 12 + 194502333 AAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833146 12 + 195804263 AAGAGAGAGGGT i panPan2.chr4 I 300 C 0 s gorGor5.CYUI01015356v1 3869928 12 + 4876863 AAGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761221 12 + 115148730 AAGAGAGAGGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045132 12 + 190429646 AAGAGAGAGGGT i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187988019 12 + 189454096 AAGAGAGAGGGT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379345 12 - 25927173 AAGAGAGAGGGT i macNem1.NW_012013133v1 C 0 T 60 s colAng1.NW_012116221v1 929725 12 + 2368649 AAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 I 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=88446.000000 s hg38.chr4_KI270789v1_alt 162049 30 + 205944 TGTAGATTACATGATGTCCAAATAAGAGGT s panTro5.chr4 192949206 30 + 194502333 TGTAGATTACATGATGTCCAAATAGGAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833158 30 + 195804263 TGTAGATTATCTGATGTCCAAGTAGGAGGT i panPan2.chr4 C 0 I 243 s gorGor5.CYUI01015356v1 3869940 30 + 4876863 TGTAGATTACATGATGTCCAAATAGGAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761233 30 + 115148730 TGTAGATGACCTGATGTCCAAGTAGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045084 30 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGT i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987971 30 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGT i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379297 30 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGT i macNem1.NW_012013133v1 T 60 C 0 s colAng1.NW_012116221v1 929857 30 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGGT i colAng1.NW_012116221v1 I 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=56204.000000 s hg38.chr4_KI270789v1_alt 162079 19 + 205944 AACAGCGTAAGGTCCTGGA s panTro5.chr4 192949236 19 + 194502333 AACAGCATAAAGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833431 19 + 195804263 AATAGCATAAGGTCCTGGA i panPan2.chr4 I 243 C 0 s gorGor5.CYUI01015356v1 3869970 19 + 4876863 AATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761263 19 + 115148730 AATAGCATAAGCTCCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045114 19 + 190429646 GATAGCATAAGGTCCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988001 19 + 189454096 GATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379327 19 - 25927173 GATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929887 19 + 2368649 GATAGCGTAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=10152.000000 s hg38.chr4_KI270789v1_alt 162098 3 + 205944 AGA s panTro5.chr4 192949255 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833450 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869989 3 + 4876863 AGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761282 3 + 115148730 AGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045133 3 + 190429646 AGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987899 3 + 189454096 AGA i macFas5.chr5 T 121 C 0 s macNem1.NW_012013133v1 24379346 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 T 120 s colAng1.NW_012116221v1 929906 3 + 2368649 AGA i colAng1.NW_012116221v1 C 0 T 82 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-2200.000000 s hg38.chr4_KI270789v1_alt 162101 1 + 205944 -C s panTro5.chr4 192949258 1 + 194502333 -C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833453 1 + 195804263 -C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869992 1 + 4876863 -C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761285 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987902 1 + 189454096 G- i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 82 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=12271.000000 s hg38.chr4_KI270789v1_alt 162102 7 + 205944 AAAGGTG s panTro5.chr4 192949259 7 + 194502333 AAAGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833454 7 + 195804263 AAAGGTG i panPan2.chr4 C 0 T 664 s gorGor5.CYUI01015356v1 3869993 7 + 4876863 AAAGGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761286 4 + 115148730 AAGG--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 7 + 190429646 AAAGGTG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 7 + 189454096 AAAGGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 7 - 25927173 AAAGGTG i macNem1.NW_012013133v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 82 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=68176.000000 s hg38.chr4_KI270789v1_alt 162109 31 + 205944 TTGTAGATTACCTGATGTCCAAATAGGACGA s panTro5.chr4 192949266 31 + 194502333 TTGTAGATTACCTGATGTCCAAATAGGAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832797 31 + 195804263 TTGTAAATTACCCGATGTCCAAATAGGAGGT i panPan2.chr4 T 664 C 0 s gorGor5.CYUI01015356v1 3870000 31 + 4876863 TTGTAGATTACCTGATGTCCAAATAGGAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761290 31 + 115148730 CTGTAGATTACCTGATGTGCAAATAGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045023 31 + 190429646 TTGTAGATTACCTGATGTCCACGTAGGAGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987910 31 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379236 31 - 25927173 TTGTAGATTACCTGATGTCCACGTAGGAGGT i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 82 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=74088.000000 s hg38.chr4_KI270789v1_alt 162140 27 + 205944 AATAGCATAAGGTCATGGAAGAGAGAG s panTro5.chr4 192949297 27 + 194502333 AATAACATAAGGTCATGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832828 27 + 195804263 AATAGTATAAGGTCTTGGAAGACAAAG i panPan2.chr4 C 0 I 848 s gorGor5.CYUI01015356v1 3870031 27 + 4876863 AATAGCATAAGGCCATGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761321 27 + 115148730 AATAGCATAAGGTCCCGAAAGAGAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045054 27 + 190429646 GATAGCATAAGGTCCTGGAAGAGAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987941 27 + 189454096 GATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379267 27 - 25927173 GATAGCATAAGGTCCTGGAAGAGAGAA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929827 27 + 2368649 GATAGCATAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 T 82 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=144021.000000 s hg38.chr4_KI270789v1_alt 162167 50 + 205944 CGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATACCATAAGGTCCTG s panTro5.chr4 192949324 50 + 194502333 CATTGTAGATTACCTGATGTCCAAATAGGAGGTAATACCATAAGGTCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833703 50 + 195804263 TGTTGTAGATTACCTGATGTCCATATAGGAGGTAATACCATAAGGTCCTG i panPan2.chr4 I 848 C 0 s gorGor5.CYUI01015356v1 3870058 50 + 4876863 CATTGTAGATTACCCGATGTCCATATAGGAGGTAATACCATAAGGTCCTG i gorGor5.CYUI01015356v1 C 0 I 1571 s nomLeu3.chr7b 112761348 50 + 115148730 AGTTGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045081 50 + 190429646 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987968 50 + 189454096 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379294 50 - 25927173 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929854 50 + 2368649 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=17028.000000 s hg38.chr4_KI270789v1_alt 162217 5 + 205944 GAAGA s panTro5.chr4 192949374 5 + 194502333 GAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833753 5 + 195804263 GAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871679 5 + 4876863 GAAGA i gorGor5.CYUI01015356v1 I 1571 C 0 s nomLeu3.chr7b 112761398 5 + 115148730 GAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045131 5 + 190429646 GAAGA i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187988018 5 + 189454096 GAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379344 5 - 25927173 GAAGA i macNem1.NW_012013133v1 C 0 T 114 s colAng1.NW_012116221v1 929904 5 + 2368649 GAAGA i colAng1.NW_012116221v1 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=2571.000000 s hg38.chr4_KI270789v1_alt 162222 6 + 205944 CAAAGG s panTro5.chr4 192949379 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833758 6 + 195804263 TACAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871684 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761403 3 + 115148730 GA---G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s colAng1.NW_012116221v1 929849 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=87267.000000 s hg38.chr4_KI270789v1_alt 162228 49 + 205944 TGTTGTAGATTACCTGATGTCCAGATAGGAGGTAATAGCATAAGGTCCT s panTro5.chr4 192949385 49 + 194502333 TGTTGTAGATTACCTGATGTCCAGATAGGAGGTAATAGCATAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833764 49 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871690 49 + 4876863 TGTTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761406 49 + 115148730 GGCTGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 49 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 T 121 C 0 s colAng1.NW_012116221v1 929855 48 + 2368649 -GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCT i colAng1.NW_012116221v1 C 0 T 109 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=-300.000000 s hg38.chr4_KI270789v1_alt 162277 1 + 205944 C s panTro5.chr4 192949434 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833813 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871739 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 1632 s nomLeu3.chr7b 112761455 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987957 1 + 189454096 G i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4932.000000 s hg38.chr4_KI270789v1_alt 162278 6 + 205944 GAACAC s panTro5.chr4 192949435 6 + 194502333 GAACAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833814 6 + 195804263 GAAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870108 6 + 4876863 GAACAT i gorGor5.CYUI01015356v1 T 1632 C 0 s nomLeu3.chr7b 112761456 6 + 115148730 GAAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987958 6 + 189454096 GAAGAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=77843.000000 s hg38.chr4_KI270789v1_alt 162284 65 + 205944 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAG s panTro5.chr4 192949441 65 + 194502333 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833820 64 + 195804263 GATAGTG-TGTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGAAGACAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870114 65 + 4876863 ACAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761462 65 + 115148730 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAG i nomLeu3.chr7b C 0 I 60 s macFas5.chr5 187987903 65 + 189454096 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1500.000000 s hg38.chr4_KI270789v1_alt 162349 1 + 205944 G s panTro5.chr4 192949506 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833884 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870179 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761587 1 + 115148730 G i nomLeu3.chr7b I 60 C 0 s macFas5.chr5 187987968 1 + 189454096 G i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=65858.000000 s hg38.chr4_KI270789v1_alt 162350 56 + 205944 TGTTGTAAATTACCCGATGTCCAAATAGGAGGTAATAGTATAAGGTCTTGGAAGAC s panTro5.chr4 192949507 56 + 194502333 TGTTGTAAATTACCCGATGTCCAAATAGGAGGTAATAGTATAAGGTCTTGGAAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833885 56 + 195804263 TGTTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870180 55 + 4876863 TG-TGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTCGAAGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 56 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 I 120 s macFas5.chr5 187987908 56 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5830.000000 s hg38.chr4_KI270789v1_alt 162406 5 + 205944 AAAGG s panTro5.chr4 192949563 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833941 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870235 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761764 5 + 115148730 AAAGG i nomLeu3.chr7b I 120 C 0 s macFas5.chr5 187987964 5 + 189454096 AGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=56466.000000 s hg38.chr4_KI270789v1_alt 162411 48 + 205944 TGTTGTAGATTGCCTGATGTCCAAAGAGGAGGGAATAGCATAAAGTCC s panTro5.chr4 192949568 48 + 194502333 TGTTGTAGATTGCCTGATGTCCAAAGAGGAGGGAATAGCATAAAGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833946 48 + 195804263 TGTTGTAGATTACGTGATGTCCAAATAGGAGGAAATAGCGTAAGGTCT i panPan2.chr4 C 0 I 118 s gorGor5.CYUI01015356v1 3870240 48 + 4876863 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761769 48 + 115148730 TGTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 48 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4050.000000 s hg38.chr4_KI270789v1_alt 162459 4 + 205944 TGGA s panTro5.chr4 192949616 4 + 194502333 TGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834112 4 + 195804263 TGGA i panPan2.chr4 I 118 C 0 s gorGor5.CYUI01015356v1 3870288 4 + 4876863 TGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761817 4 + 115148730 TTGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987956 4 + 189454096 TGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9833.000000 s hg38.chr4_KI270789v1_alt 162463 9 + 205944 AGACAAAGG s panTro5.chr4 192949620 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834116 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 I 732 s gorGor5.CYUI01015356v1 3870292 9 + 4876863 AGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761821 9 + 115148730 AGAGAGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=681.000000 s hg38.chr4_KI270789v1_alt 162472 6 + 205944 TGTTAT s panTro5.chr4 192949629 6 + 194502333 TGTTGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870301 5 + 4876863 TGTTT- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761830 4 + 115148730 -GTTG- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 6 + 189454096 TGTTGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e panPan2.chr4 192834125 732 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 162478 1 + 205944 T s panTro5.chr4 192949635 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834857 1 + 195804263 T i panPan2.chr4 I 732 C 0 s gorGor5.CYUI01015356v1 3870306 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761834 1 + 115148730 T i nomLeu3.chr7b C 0 T 715 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e macFas5.chr5 187987914 0 + 189454096 C e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=-203.000000 s hg38.chr4_KI270789v1_alt 162479 2 + 205944 AT s panTro5.chr4 192949636 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834858 2 + 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870307 2 + 4876863 CG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987914 2 + 189454096 AG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e nomLeu3.chr7b 112761835 715 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=14694.000000 s hg38.chr4_KI270789v1_alt 162481 13 + 205944 ATTACCTGATGTC s panTro5.chr4 192949638 13 + 194502333 ATGACCTGATGTC i panTro5.chr4 C 0 I 1331 s panPan2.chr4 192834860 13 + 195804263 ATTACCTGAGTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870309 13 + 4876863 ATTACCTGATGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761120 13 + 115148730 ATGACCTGATGTC i nomLeu3.chr7b T 715 C 0 s macFas5.chr5 187987916 13 + 189454096 ATTACCTGATGTC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=39335.000000 s hg38.chr4_KI270789v1_alt 162494 33 + 205944 CAAATAGGAGGTAATAGCATAAGGTCCTAGAAG s panTro5.chr4 192950982 33 + 194502333 CAAATAGGAGGTAATAGCATAAGGTCCTCGAAG i panTro5.chr4 I 1331 I 2111 s panPan2.chr4 192834873 33 + 195804263 CAAATAGGAGTTAATAGCATAAGGTCCTGGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870322 33 + 4876863 CAAATAGGAGGTAATAGAATGAGGTCCCGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761133 33 + 115148730 CAAGTAGGAGGTAATAGCATAAGGTCCTGGAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987929 33 + 189454096 CACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3950.000000 s hg38.chr4_KI270789v1_alt 162527 4 + 205944 AGAG s panTro5.chr4 192953126 4 + 194502333 ACAG i panTro5.chr4 I 2111 I 3925 s panPan2.chr4 192834906 4 + 195804263 AGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870355 4 + 4876863 AGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761166 4 + 115148730 AGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987962 4 + 189454096 AGAG i macFas5.chr5 C 0 I 2 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=24525.000000 s hg38.chr4_KI270789v1_alt 162531 21 + 205944 GGCTGTAGATTACCTGATATG s panTro5.chr4 192957055 21 + 194502333 GGCTGTAGATTACCTGATATC i panTro5.chr4 I 3925 T 7425 s panPan2.chr4 192834910 21 + 195804263 GGCAGTAGATTACATGATGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870359 21 + 4876863 GGCTGTAGATTACCTGATGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761170 21 + 115148730 GGCTGTAGATTACCTGATGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987968 21 + 189454096 GGTTGTAGATTACCTGATGTC i macFas5.chr5 I 2 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=30230.000000 s hg38.chr4_KI270789v1_alt 162552 23 + 205944 CAAATAGGAGGTAATAGCATAAG s panTro5.chr4 192949651 23 + 194502333 CAAATAGGAGGTAATAGCATAAG i panTro5.chr4 T 7425 C 0 s panPan2.chr4 192834931 23 + 195804263 CAAATAGGAGGTAATAGCATAAG i panPan2.chr4 C 0 T 1992 s gorGor5.CYUI01015356v1 3870380 23 + 4876863 CAAATAGGAGGTAATAGCATAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761191 23 + 115148730 CAAATAGGAGGTAATAGCATAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987989 23 + 189454096 CACGTAGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6333.000000 s hg38.chr4_KI270789v1_alt 162575 7 + 205944 ATCCTGG s panTro5.chr4 192949674 7 + 194502333 ATCCTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832962 7 + 195804263 ATCCTGG i panPan2.chr4 T 1992 C 0 s gorGor5.CYUI01015356v1 3870403 7 + 4876863 GTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761214 7 + 115148730 ATACAAG i nomLeu3.chr7b C 0 I 118 s macFas5.chr5 187988012 7 + 189454096 GTCCTGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2160.000000 s hg38.chr4_KI270789v1_alt 162582 7 + 205944 A---AGAGAG s panTro5.chr4 192949681 7 + 194502333 A---AGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832969 7 + 195804263 A---AGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870410 9 + 4876863 AA-GAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761339 9 + 115148730 -AAGAGAGGG i nomLeu3.chr7b I 118 C 0 s macFas5.chr5 187988019 7 + 189454096 ---AAGAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 109 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=781.000000 s hg38.chr4_KI270789v1_alt 162589 1 + 205944 G s panTro5.chr4 192949688 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832976 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870419 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761348 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988026 1 + 189454096 A i macFas5.chr5 C 0 T 118 s colAng1.NW_012116221v1 929794 1 + 2368649 G i colAng1.NW_012116221v1 T 109 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 114 - 25927173 T e rheMac8.chr5 189045136 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=89195.000000 s hg38.chr4_KI270789v1_alt 162590 32 + 205944 GTTATAGATTATGTGATGTCCAAATAGGAGGT s panTro5.chr4 192949689 32 + 194502333 GTTATAGATTATGTGATGTCCAAATAGGAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192832977 32 + 195804263 GTTATAGATTATGTGATGTCCAAATAGGAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870420 32 + 4876863 GTTGTAGATTACATGATGTCCAAAGAGGAGGT i gorGor5.CYUI01015356v1 C 0 I 549 s nomLeu3.chr7b 112761349 32 + 115148730 GTTGTACATTACATGATGTCCAAATAGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 32 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGT i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187987909 32 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGT i macFas5.chr5 T 118 C 0 s macNem1.NW_012013133v1 24379235 32 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGT i macNem1.NW_012013133v1 T 114 C 0 s colAng1.NW_012116221v1 929795 32 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=58829.000000 s hg38.chr4_KI270789v1_alt 162622 23 + 205944 AACAGCATAAGGTGCTGGTAGAG s panTro5.chr4 192949721 23 + 194502333 AATAGCATAAGGTGCTGGTAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833009 23 + 195804263 AATAGCATAAGGTGCTGGTAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871001 23 + 4876863 AATAGCATAAGTTCCTGGAAGAC i gorGor5.CYUI01015356v1 I 549 C 0 s nomLeu3.chr7b 112761381 21 + 115148730 AATAGCATAAGGTCCTGGAAG-- i nomLeu3.chr7b C 0 I 242 s rheMac8.chr5 189045054 23 + 190429646 GATAGCATAAGGTCCTGGAAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987941 23 + 189454096 GATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379267 23 - 25927173 GATAGCATAAGGTCCTGGAAGAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929827 23 + 2368649 GATAGCATAAGGTCCTGGAAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=155239.000000 s hg38.chr4_KI270789v1_alt 162645 56 + 205944 AGAGG-GCTGTAGATTACCTGATGTCCAAATAGGAAGTAATAGCCTATGGTCCTGGA s panTro5.chr4 192949744 56 + 194502333 AGAAG-GCTGTAGATTACCTGATGTCCAAATAGGAAGTAATAGCCTATGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833032 56 + 195804263 AGAAG-GCTGTAGATTACCTGATGTCCAAATAGGAAGTAATAGCCTATGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871024 57 + 4876863 AAAGGTGTTGTAGATTACCTGAGGTCCAAATAGGAGTTAATAGCCTAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 I 29 s nomLeu3.chr7b 112761644 56 + 115148730 AGAGG-GCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i nomLeu3.chr7b I 242 C 0 s rheMac8.chr5 189045077 56 + 190429646 AGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987964 56 + 189454096 AGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379290 56 - 25927173 AGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929850 56 + 2368649 AGAGG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=22617.000000 s hg38.chr4_KI270789v1_alt 162701 9 + 205944 AGAGAGAGG s panTro5.chr4 192949800 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833088 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761700 9 + 115148730 AGAGAGACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045133 9 + 190429646 AGAGAGAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988020 9 + 189454096 AGAGAGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379346 9 - 25927173 AGAGAGAGG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929906 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 T 157 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3871081 29 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3279.000000 s hg38.chr4_KI270789v1_alt 162710 2 + 205944 GT s panTro5.chr4 192949809 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833097 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761709 2 + 115148730 GC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045142 2 + 190429646 GT i rheMac8.chr5 C 0 T 128 s macFas5.chr5 187988029 2 + 189454096 GT i macFas5.chr5 C 0 T 99 s macNem1.NW_012013133v1 24379355 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 T 128 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929915 157 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3871081 29 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=7446.000000 s hg38.chr4_KI270789v1_alt 162712 19 + 205944 TATAGATAACCCCATCTCC s panTro5.chr4 192949811 19 + 194502333 TATAGATAACCCGATCTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833099 19 + 195804263 TATAGATAACCCGATCTCC i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761711 19 + 115148730 TGTAGATTACATGATATCC i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929915 157 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e macFas5.chr5 187988031 99 + 189454096 T e rheMac8.chr5 189045144 128 + 190429646 T e gorGor5.CYUI01015356v1 3871081 29 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 162731 1 + 205944 A s panTro5.chr4 192949830 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833118 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871110 1 + 4876863 A i gorGor5.CYUI01015356v1 I 29 C 0 s nomLeu3.chr7b 112761730 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929915 157 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e macFas5.chr5 187988031 99 + 189454096 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=700.000000 s hg38.chr4_KI270789v1_alt 162732 1 + 205944 A s panTro5.chr4 192949831 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833119 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871111 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761731 1 + 115148730 A i nomLeu3.chr7b C 0 T 688 s macFas5.chr5 187987932 1 + 189454096 G i macFas5.chr5 T 99 C 0 s colAng1.NW_012116221v1 929758 1 + 2368649 G i colAng1.NW_012116221v1 T 157 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=33287.000000 s hg38.chr4_KI270789v1_alt 162733 27 + 205944 TAGGAGGTAATAGCGTAAGGTCCTGCA s panTro5.chr4 192949832 27 + 194502333 TAGGAGGTAATAGCGTAAGGTCCTGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833120 27 + 195804263 TAGGAGGTAATAGCGTAAGGTCCTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871112 27 + 4876863 TAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987933 27 + 189454096 TAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929759 27 + 2368649 TAGGAGCTGATAGCATAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e nomLeu3.chr7b 112761732 688 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=16196.000000 s hg38.chr4_KI270789v1_alt 162760 9 + 205944 AGAGAGAGG s panTro5.chr4 192949859 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833147 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871139 9 + 4876863 AGAGAGATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761044 9 + 115148730 AGAGAGAGG i nomLeu3.chr7b T 688 C 0 s macFas5.chr5 187987960 9 + 189454096 AGAGAGAAG i macFas5.chr5 C 0 T 60 s colAng1.NW_012116221v1 929786 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=82359.000000 s hg38.chr4_KI270789v1_alt 162769 59 + 205944 GTCGTA-------------------------------------------------------------GAATATCTGATGTCCAAGTAGGAGGTAGTCGCATAAGGTCCTGGAAGATAGAC s panTro5.chr4 192949868 59 + 194502333 GTTGTA-------------------------------------------------------------GATTATCTGATGTCCAAGTAGGAGGTAATCCCATAAGGTCCTGGAAGATAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833156 59 + 195804263 GTTGTA-------------------------------------------------------------GATTATCTGATGTCCAAGTAGGAGGTAATCCCATAAGGTCCTGGAAGATAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871148 120 + 4876863 GTTGTACATTACATAATTTCTAAATAGGGGGTAATAGCATAACGTCCTGGAAGACAAAGGTGTTGCGGATTACCTGATGTCCAAATAGGAGGATATAGCATAAGGTCCTGGAAGAAAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761053 59 + 115148730 GTTGTA-------------------------------------------------------------GATTACCTGATGTCCAAGTAGGAGGTAATCACATAAGGTCCTGGAAGAGAGAG i nomLeu3.chr7b C 0 I 415 s macFas5.chr5 187987909 59 + 189454096 GTTGTA-------------------------------------------------------------GATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929795 59 + 2368649 GTTGTA-------------------------------------------------------------GATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=89368.000000 s hg38.chr4_KI270789v1_alt 162828 55 + 205944 GGTTGTAGATGACCTGGTGTCCAAATGGGAGGAAATAGCATAAGGTCCTGGAAGA s panTro5.chr4 192949927 55 + 194502333 GGTTGTAGATGACCTGATGTGCAAATGGGAGGTAATAGCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833215 55 + 195804263 GGTTGTAGATGACCTGATGTGCAAATGGGAGGTAATAGCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871268 55 + 4876863 GGTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761527 55 + 115148730 GGTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b I 415 C 0 s macFas5.chr5 187987968 55 + 189454096 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929854 55 + 2368649 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 T 210 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6860.000000 s hg38.chr4_KI270789v1_alt 162883 6 + 205944 CAAAGG s panTro5.chr4 192949982 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833270 6 + 195804263 CAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871323 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761582 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=60023.000000 s hg38.chr4_KI270789v1_alt 162889 52 + 205944 TGTTGTAGATTACCTGAAGTCCAAATAGGAGGTAACAGCATAAGGTCCTCGA s panTro5.chr4 192949988 52 + 194502333 TGTTGTAGATTACCTGAAGTCCAAATAGGAGGTAACAGCATAAGGTCCTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833276 52 + 195804263 TGTTGTAGATTACCTGAAGTCCAAATAGGAGGTAACAGCATAAGGTCCTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871329 52 + 4876863 TCTTGTAGACTACCTGATGTCCAAATAGGAGGTAATAGAATAAGGTTGTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 52 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 121 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9850.000000 s hg38.chr4_KI270789v1_alt 162941 10 + 205944 AGACAAAGGT s panTro5.chr4 192950040 10 + 194502333 AGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833328 10 + 195804263 AGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871381 10 + 4876863 AGACAAAGGT i gorGor5.CYUI01015356v1 C 0 I 120 s nomLeu3.chr7b 112761640 9 + 115148730 AGACAGAGG- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=36631.000000 s hg38.chr4_KI270789v1_alt 162951 32 + 205944 GTTGTAGATTGCCTGGTGTCCAAATAGGAGGA s panTro5.chr4 192950050 32 + 194502333 GTTGTAGATTGCCTGGTGTCCAAATAGGAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833338 32 + 195804263 GTTGTAGATTGCCTGGTGTCCAAATAGGAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871511 32 + 4876863 GTTGTAGATGACCTGATGTCCAAATGGGAGGT i gorGor5.CYUI01015356v1 I 120 T 1091 s nomLeu3.chr7b 112761649 32 + 115148730 GCTGTAGATTACATGATGTCCAAATAGGAGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 32 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=33755.000000 s hg38.chr4_KI270789v1_alt 162983 28 + 205944 AATAGCATAAGGTCCTGGAAGACAAAGG s panTro5.chr4 192950082 28 + 194502333 AATAGCATAAGGTCCTGGAAGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833370 28 + 195804263 AATAGCATAAGGTCCTGGAAGACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870452 28 + 4876863 AATAGCATAAGGTCATGGAAGACAAAGG i gorGor5.CYUI01015356v1 T 1091 C 0 s nomLeu3.chr7b 112761681 28 + 115148730 AATAGCATAAGGTCCTGGAAGAGAGACG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987941 28 + 189454096 GATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=840.000000 s hg38.chr4_KI270789v1_alt 163011 4 + 205944 TGTT s panTro5.chr4 192950110 4 + 194502333 TGTT i panTro5.chr4 C 0 I 426 s panPan2.chr4 192833398 4 + 195804263 TGTT i panPan2.chr4 C 0 I 4928 s gorGor5.CYUI01015356v1 3870480 4 + 4876863 TGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 3 + 115148730 GCT- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 4 + 189454096 TGTT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1910.000000 s hg38.chr4_KI270789v1_alt 163015 2 + 205944 GT s panTro5.chr4 192950540 2 + 194502333 GT i panTro5.chr4 I 426 C 0 s gorGor5.CYUI01015356v1 3870484 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761712 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987912 2 + 189454096 GT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e panPan2.chr4 192833402 4928 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=51446.000000 s hg38.chr4_KI270789v1_alt 163017 46 + 205944 AGATTACCTGAAGTCCAAATAGGAGGTAACAGCATAAGGTCCTCGA s panTro5.chr4 192950542 46 + 194502333 AGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838330 46 + 195804263 ACATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTCGA i panPan2.chr4 I 4928 C 0 s gorGor5.CYUI01015356v1 3870486 46 + 4876863 AAATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761714 46 + 115148730 AGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987914 46 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11700.000000 s hg38.chr4_KI270789v1_alt 163063 9 + 205944 AGACAAAGG s panTro5.chr4 192950588 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 T 182 s panPan2.chr4 192838376 9 + 195804263 AGACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870532 9 + 4876863 AGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 9 + 115148730 AGACAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61240.000000 s hg38.chr4_KI270789v1_alt 163072 52 + 205944 TGTTGTAGATTGCCTGGTGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA s panTro5.chr4 192950415 52 + 194502333 TGTTGTAGATTACCTGATGTCCATATAGGAGGTAATACCATAAGGTCCTGGA i panTro5.chr4 T 182 C 0 s panPan2.chr4 192838385 52 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870541 52 + 4876863 TGTTGTAGATTACCTGATGTCTAAATAGGAGATAATAGCATAAGGTCCTCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761769 52 + 115148730 TGTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 I 9 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4471.000000 s hg38.chr4_KI270789v1_alt 163124 10 + 205944 AGAAAAAGGT s panTro5.chr4 192950467 10 + 194502333 AGATACAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838437 10 + 195804263 AGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870593 10 + 4876863 AGACAAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761821 9 + 115148730 AGAGAGAGG- i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e macFas5.chr5 187987960 9 + 189454096 I e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=66431.000000 s hg38.chr4_KI270789v1_alt 163134 53 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAG s panTro5.chr4 192950477 53 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838447 53 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAG i panPan2.chr4 C 0 I 180 s gorGor5.CYUI01015356v1 3870603 53 + 4876863 GTTGTAGATTACCTGATGTCCAATTAGGAGGTAATAACATAAGGTCCTGGAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761830 53 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 53 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macFas5.chr5 I 9 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5488.000000 s hg38.chr4_KI270789v1_alt 163187 7 + 205944 ACAAAGG s panTro5.chr4 192950530 7 + 194502333 ACGATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838680 7 + 195804263 ACAAAGG i panPan2.chr4 I 180 C 0 s gorGor5.CYUI01015356v1 3870656 7 + 4876863 ACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761883 7 + 115148730 ACAAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988022 7 + 189454096 AGAGAGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=60825.000000 s hg38.chr4_KI270789v1_alt 163194 53 + 205944 TGTTG-TAGATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGAA s panTro5.chr4 192950537 52 + 194502333 TGT-G-TAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838687 53 + 195804263 TGTTG-TAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAA i panPan2.chr4 C 0 I 118 s gorGor5.CYUI01015356v1 3870663 54 + 4876863 TGTTGTTAGATTACCTGATGTCCAAATAGGAGGTAATAACATAAGGTCCTGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761890 53 + 115148730 TGTTG-TAGATTACCTGATGTCCAAATAGGTGGTAATAGCATAAGGTCCGCGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 53 + 189454096 TGTTG-TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6200.000000 s hg38.chr4_KI270789v1_alt 163247 8 + 205944 GACAAAGG s panTro5.chr4 192950589 8 + 194502333 GACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838858 8 + 195804263 GACAAAGG i panPan2.chr4 I 118 C 0 s gorGor5.CYUI01015356v1 3870717 8 + 4876863 TACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761943 8 + 115148730 GAGAAAGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987961 8 + 189454096 GAGAGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4985.000000 s hg38.chr4_KI270789v1_alt 163255 4 + 205944 TGTC s panTro5.chr4 192950597 4 + 194502333 TGTT i panTro5.chr4 C 0 T 487 s panPan2.chr4 192838866 4 + 195804263 TGTT i panPan2.chr4 C 0 T 5468 s gorGor5.CYUI01015356v1 3870725 4 + 4876863 TGTT i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112761951 4 + 115148730 TGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 4 + 189454096 TGTT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61364.000000 s hg38.chr4_KI270789v1_alt 163259 50 + 205944 GTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAG s panTro5.chr4 192950114 50 + 194502333 GTAGATTGCCTGGTGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAG i panTro5.chr4 T 487 C 0 s panPan2.chr4 192833402 50 + 195804263 GTAGATTGCCTGGTGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAG i panPan2.chr4 T 5468 C 0 s gorGor5.CYUI01015356v1 3870730 50 + 4876863 TTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGGAG i gorGor5.CYUI01015356v1 I 1 I 1086 s nomLeu3.chr7b 112761955 50 + 115148730 GTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCGCGAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987912 50 + 189454096 GTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4412.000000 s hg38.chr4_KI270789v1_alt 163309 6 + 205944 ACAAAC s panTro5.chr4 192950164 6 + 194502333 ACAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833452 6 + 195804263 ACAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871866 6 + 4876863 ACAAAG i gorGor5.CYUI01015356v1 I 1086 C 0 s nomLeu3.chr7b 112762005 6 + 115148730 AGAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987962 6 + 189454096 AGAGAA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=15850.000000 s hg38.chr4_KI270789v1_alt 163315 12 + 205944 GTGTTGTAGATT s panTro5.chr4 192950170 12 + 194502333 GTGTTGTAGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833458 12 + 195804263 GTGTTGTAGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871872 12 + 4876863 GTGTTGTAGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762011 12 + 115148730 GTGTTGTAGATT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987907 12 + 189454096 GTGTTGTAGATT i macFas5.chr5 T 61 I 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=55688.000000 s hg38.chr4_KI270789v1_alt 163327 48 + 205944 ACCTGATGTCCAAATAGGAGGTAATATCAT-AAGGTGCTGGAAGAGAGA s panTro5.chr4 192950182 48 + 194502333 ACCTGATGTCCAAATAGGAGGTAATAGCAT-AAGGTGCTGCAAGAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833470 48 + 195804263 ACCTGATGTCCAAATAGGAGGTAATAGCAT-AAGGTGCTGCAAGAGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871884 48 + 4876863 ACCTGATGTCCAAATAAGTGGTAATAGCAT-AAGGTCCTGCAAGAGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762023 49 + 115148730 ACATGATGTCCAAGTAGGAGGTAATAGCATAAAGGTCCTGGAAGAGAGA i nomLeu3.chr7b C 0 T 244 s macFas5.chr5 187987979 48 + 189454096 ACCTGATGTCCACGTAGGAGGTGATAGCAT-AAGGTCCTGGAAGAGAGA i macFas5.chr5 I 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3845.000000 s hg38.chr4_KI270789v1_alt 163375 3 + 205944 GAG s panTro5.chr4 192950230 3 + 194502333 GGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833518 3 + 195804263 GGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871932 3 + 4876863 GGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761828 3 + 115148730 GGG i nomLeu3.chr7b T 244 C 0 s macFas5.chr5 187988027 3 + 189454096 GGG i macFas5.chr5 C 0 T 98 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=13189.000000 s hg38.chr4_KI270789v1_alt 163378 21 + 205944 CTTTAGATTACCCGATGT-CAA s panTro5.chr4 192950233 21 + 194502333 CTTTACATTACCCGATGT-CAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833521 21 + 195804263 CTTTACATTACCCGATGT-CAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871935 22 + 4876863 TTGTAGATTACCTGATGTCCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761831 22 + 115148730 TTGTAGATTACCTGATGTCCAA i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e macFas5.chr5 187988030 98 + 189454096 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=755.000000 s hg38.chr4_KI270789v1_alt 163399 1 + 205944 A s panTro5.chr4 192950254 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833542 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871957 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761853 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987932 1 + 189454096 G i macFas5.chr5 T 98 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 210 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=36363.000000 s hg38.chr4_KI270789v1_alt 163400 26 + 205944 TAGGAGGTAATAG---CGTAAGGTCCTGT s panTro5.chr4 192950255 29 + 194502333 TAGGAGGTAATAAAATCATAAGGTCCTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833543 29 + 195804263 TAGGAGGTAATAAAATCATAAGGTCCTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871958 26 + 4876863 TAGGAGGTAATAG---CATAAGGTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761854 26 + 115148730 TTGCAGATAATAG---CATAAGGTCCTGG i nomLeu3.chr7b C 0 T 659 s macFas5.chr5 187987933 26 + 189454096 TAGGAGGTGATAG---CATAAGGTCCTGG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929699 26 + 2368649 TAGGAGCTGATAG---CGTAAGGTCCTGG i colAng1.NW_012116221v1 T 210 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5190.000000 s hg38.chr4_KI270789v1_alt 163426 3 + 205944 AAG s panTro5.chr4 192950284 3 + 194502333 AAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833572 3 + 195804263 AAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871984 3 + 4876863 GAG i gorGor5.CYUI01015356v1 C 0 T 846 s nomLeu3.chr7b 112761221 3 + 115148730 AAG i nomLeu3.chr7b T 659 C 0 s macFas5.chr5 187987959 3 + 189454096 AAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929725 3 + 2368649 AAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=23297.000000 s hg38.chr4_KI270789v1_alt 163429 13 + 205944 AGAGAGGGTTGTA s panTro5.chr4 192950287 13 + 194502333 AGAGAGGGTTGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833575 13 + 195804263 AGAGAGGGTTGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871141 13 + 4876863 AGAGATGGTTGTA i gorGor5.CYUI01015356v1 T 846 C 0 s nomLeu3.chr7b 112761224 13 + 115148730 AGAGAGGGCTGTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987962 13 + 189454096 AGAGAAGGTTGTA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929728 13 + 2368649 AGAGAGGGTTGTA i colAng1.NW_012116221v1 C 0 T 6 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2884.000000 s hg38.chr4_KI270789v1_alt 163442 4 + 205944 GATG s panTro5.chr4 192950300 4 + 194502333 GATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833588 4 + 195804263 GATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871154 4 + 4876863 CATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761237 4 + 115148730 GATG i nomLeu3.chr7b C 0 I 539 s macFas5.chr5 187987975 4 + 189454096 GATT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929741 6 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=43950.000000 s hg38.chr4_KI270789v1_alt 163446 42 + 205944 ACATGATGTCCAAAGAGGAGGTAATAGCATGAAGACCTGAAA s panTro5.chr4 192950304 42 + 194502333 ACATGATGTCCAAAGAGGAGGTAATAGCATGAAGACCTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833592 42 + 195804263 ACATGATGTCCAAAGAGGAGGTAATAGCATGAAGACCTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871158 42 + 4876863 ACATAATTTCTAAATAGGGGGTAATAGCATAACGTCCTGGAA i gorGor5.CYUI01015356v1 C 0 T 420 s nomLeu3.chr7b 112761780 42 + 115148730 ACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGA i nomLeu3.chr7b I 539 I 61 s macFas5.chr5 187987979 42 + 189454096 ACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929741 6 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=471.000000 s hg38.chr4_KI270789v1_alt 163488 2 + 205944 CA s panTro5.chr4 192950346 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833634 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s macFas5.chr5 187988021 2 + 189454096 GA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929741 6 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e nomLeu3.chr7b 112761822 61 + 115148730 I e gorGor5.CYUI01015356v1 3871200 420 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=65.000000 s hg38.chr4_KI270789v1_alt 163490 2 + 205944 -AC s panTro5.chr4 192950348 2 + 194502333 -AC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833636 2 + 195804263 -AC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870780 2 + 4876863 -AC i gorGor5.CYUI01015356v1 T 420 C 0 s nomLeu3.chr7b 112761883 2 + 115148730 -AC i nomLeu3.chr7b I 61 C 0 s macFas5.chr5 187988023 2 + 189454096 GA- i macFas5.chr5 C 0 T 122 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929741 6 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365851 127 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 128 - 25927173 T e rheMac8.chr5 189045144 128 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19256.000000 s hg38.chr4_KI270789v1_alt 163492 6 + 205944 AAAGGT s panTro5.chr4 192950350 6 + 194502333 AAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833638 6 + 195804263 AAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870782 6 + 4876863 AAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761885 6 + 115148730 AAAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 6 + 190429646 AAAGGT i rheMac8.chr5 T 128 C 0 s macFas5.chr5 187987903 6 + 189454096 AAAGGT i macFas5.chr5 T 122 C 0 s macNem1.NW_012013133v1 24379229 6 - 25927173 AAAGGT i macNem1.NW_012013133v1 T 128 C 0 s chlSab2.chr7 134365724 6 + 135778131 AAAGGT i chlSab2.chr7 T 127 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929741 6 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=209261.000000 s hg38.chr4_KI270789v1_alt 163498 59 + 205944 GTTGTAGATTGCCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAG s panTro5.chr4 192950356 59 + 194502333 GTTGTAGATTGCCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCTTGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833644 59 + 195804263 GTTGTAGATTGCCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870788 59 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCGTAAGGGCATGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761891 59 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGTGGTAATAGCATAAGGTCCGCGAAGAGAAAG i nomLeu3.chr7b C 0 T 242 s rheMac8.chr5 189045022 59 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 59 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 59 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 59 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929735 59 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 T 6 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=84715.000000 s hg38.chr4_KI270789v1_alt 163557 23 + 205944 TGTTGTAGATTACCTGATGTCCA s panTro5.chr4 192950415 23 + 194502333 TGTTGTAGATTACCTGATGTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833703 23 + 195804263 TGTTGTAGATTACCTGATGTCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870847 23 + 4876863 GGCACTAGATTACCTGATGTCCA i gorGor5.CYUI01015356v1 C 0 T 789 s nomLeu3.chr7b 112761708 23 + 115148730 GGCTGTAGATTACATGATATCCA i nomLeu3.chr7b T 242 C 0 s rheMac8.chr5 189045081 23 + 190429646 GGTTGTAGATTACCTGATGTCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987968 23 + 189454096 GGTTGTAGATTACCTGATGTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379294 23 - 25927173 GGTTGTAGATTACCTGATGTCCA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365789 23 + 135778131 GGTTGTAGATTACCTGATGTCCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929794 23 + 2368649 GGTTGTAGATTACCTGATGTCCA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=107232.000000 s hg38.chr4_KI270789v1_alt 163580 32 + 205944 TATAGGAGGTAATACCGTAAGGTCCTGGAAGA s panTro5.chr4 192950438 32 + 194502333 TATAGGAGGTAATACCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833726 32 + 195804263 TATAGGAGGTAATACCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870081 32 + 4876863 TATAGGAGGTAATACCATAAGGTCCTGGAACA i gorGor5.CYUI01015356v1 T 789 C 0 s nomLeu3.chr7b 112761731 32 + 115148730 AATTGCAGATAATAGCATAAGGTCCTCAAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045104 32 + 190429646 CGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 112 s macFas5.chr5 187987991 32 + 189454096 CGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379317 32 - 25927173 CGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 112 s chlSab2.chr7 134365812 32 + 135778131 CGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 T 112 s colAng1.NW_012116221v1 929817 32 + 2368649 CGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6564.000000 s hg38.chr4_KI270789v1_alt 163612 6 + 205944 TACAGG s panTro5.chr4 192950470 6 + 194502333 TACAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833758 6 + 195804263 TACAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870113 6 + 4876863 TACAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761763 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s colAng1.NW_012116221v1 929849 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 163618 1 + 205944 T s panTro5.chr4 192950476 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833764 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870119 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761769 1 + 115148730 T i nomLeu3.chr7b C 0 T 61 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929855 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=93799.000000 s hg38.chr4_KI270789v1_alt 163619 54 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA s panTro5.chr4 192950477 54 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833765 54 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870120 54 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 54 + 115148730 GCTGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAAAGA i nomLeu3.chr7b T 61 C 0 s macFas5.chr5 187987909 54 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 I 8 s colAng1.NW_012116221v1 929855 54 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 T 168 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3407.000000 s hg38.chr4_KI270789v1_alt 163673 8 + 205944 CGATGGTG- s panTro5.chr4 192950531 8 + 194502333 CGATAGTG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833819 8 + 195804263 CGATAGTG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870174 8 + 4876863 CGAAGGTG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761763 9 + 115148730 CAAAGGTGT i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e macFas5.chr5 187987963 8 + 189454096 I e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61317.000000 s hg38.chr4_KI270789v1_alt 163681 49 + 205944 TGTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGA s panTro5.chr4 192950539 49 + 194502333 TGTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833827 49 + 195804263 TGTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870182 49 + 4876863 TGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTCGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761772 49 + 115148730 TGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 49 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 I 8 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=84422.000000 s hg38.chr4_KI270789v1_alt 163730 70 + 205944 AGACAAAGGTGTTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAGG s panTro5.chr4 192950588 70 + 194502333 AGACAAAGGTGTTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833876 70 + 195804263 AGACAAAGGTGTTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870231 70 + 4876863 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761821 69 + 115148730 AGAGAGAGG-GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGAAGACAAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 70 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 T 121 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6054.000000 s hg38.chr4_KI270789v1_alt 163800 7 + 205944 TGTTTTC s panTro5.chr4 192950658 7 + 194502333 TGTTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833946 7 + 195804263 TGTTGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870301 7 + 4876863 TGTTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761890 7 + 115148730 TGTTGTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 7 + 189454096 TGTTGTA i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7833.000000 s hg38.chr4_KI270789v1_alt 163807 4 + 205944 GATT s panTro5.chr4 192950665 4 + 194502333 GATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833953 4 + 195804263 GATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870308 4 + 4876863 GATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761897 4 + 115148730 GATT i nomLeu3.chr7b C 0 T 660 s macFas5.chr5 187987915 4 + 189454096 GATT i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929741 4 + 2368649 GATT i colAng1.NW_012116221v1 T 168 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=22716.000000 s hg38.chr4_KI270789v1_alt 163811 12 + 205944 ACCTGATGTCCA s panTro5.chr4 192950669 12 + 194502333 ACCTGATGTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833957 12 + 195804263 ACGTGATGTCCA i panPan2.chr4 C 0 I 60 s gorGor5.CYUI01015356v1 3870312 12 + 4876863 ACCTGATGTCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761241 12 + 115148730 ACCTGATGTCCA i nomLeu3.chr7b T 660 C 0 s macFas5.chr5 187987919 12 + 189454096 ACCTGATGTCCA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929745 12 + 2368649 ACCTGATGTCCA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=53388.000000 s hg38.chr4_KI270789v1_alt 163823 35 + 205944 AATAGGAGGTAATAGAATAAGGTCCTGGAAGAGAG s panTro5.chr4 192950681 35 + 194502333 AATAGGAGGTAATAGAATAAGGTCCTGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834029 35 + 195804263 AATAGCAGGTAATAGCATACAGTCCTGGAAGGGAG i panPan2.chr4 I 60 C 0 s gorGor5.CYUI01015356v1 3870324 35 + 4876863 AATAGGAGGTAATAGAATGAGGTCCCGGAAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761253 35 + 115148730 AGTAGGAGGTAATAGCATAAGCTCCTGGAAGAGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987931 35 + 189454096 CGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 C 0 T 57 s colAng1.NW_012116221v1 929757 35 + 2368649 CGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAG i colAng1.NW_012116221v1 C 0 I 2 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1500.000000 s hg38.chr4_KI270789v1_alt 163858 1 + 205944 G s panTro5.chr4 192950716 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834064 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870359 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761288 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 929794 1 + 2368649 G i colAng1.NW_012116221v1 I 2 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e macFas5.chr5 187987966 57 + 189454096 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2881.000000 s hg38.chr4_KI270789v1_alt 163859 2 + 205944 GC s panTro5.chr4 192950717 2 + 194502333 GC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834065 2 + 195804263 GC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870360 2 + 4876863 GC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761289 2 + 115148730 GC i nomLeu3.chr7b C 0 T 353 s macFas5.chr5 187987909 2 + 189454096 GT i macFas5.chr5 T 57 C 0 s colAng1.NW_012116221v1 929795 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 112 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=81385.000000 s hg38.chr4_KI270789v1_alt 163861 22 + 205944 TGTAGATTACTTGATGTCCAAA s panTro5.chr4 192950719 22 + 194502333 TGTAGATTACTTGATGTCCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834067 22 + 195804263 TGTAGATTACCTGATGTCCAAA i panPan2.chr4 C 0 I 120 s gorGor5.CYUI01015356v1 3870362 22 + 4876863 TGTAGATTACCTGATGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760938 22 + 115148730 TGTAGATGACCTGATGTCCAAA i nomLeu3.chr7b T 353 C 0 s rheMac8.chr5 189045024 22 + 190429646 TGTAGATTACCTGATGTCCACG i rheMac8.chr5 T 112 C 0 s macFas5.chr5 187987911 22 + 189454096 TGTAGATTACCTGATGTCCACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379237 22 - 25927173 TGTAGATTACCTGATGTCCACG i macNem1.NW_012013133v1 T 112 C 0 s chlSab2.chr7 134365732 22 + 135778131 TGTAGATTACCTGATGTCCACG i chlSab2.chr7 T 112 C 0 s colAng1.NW_012116221v1 929737 22 + 2368649 TGTAGATTACCTGATGTCCACG i colAng1.NW_012116221v1 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=105247.000000 s hg38.chr4_KI270789v1_alt 163883 26 + 205944 TAGGAGGTAATAGCATAAGGTCCTGG s panTro5.chr4 192950741 26 + 194502333 TAGGAGGTAATAGCATAAGGTCCTGG i panTro5.chr4 C 0 I 122 s panPan2.chr4 192834209 26 + 195804263 TAGGAGGTAATAGCATAAGGTCCTGG i panPan2.chr4 I 120 C 0 s gorGor5.CYUI01015356v1 3870384 26 + 4876863 TAGGAGGTAATAGCATAAGGTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760960 26 + 115148730 TAGGAGGTAATAGCATAAGGTCCTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045046 26 + 190429646 TAGGAGGTGATAGCATAAGGTCCTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987933 26 + 189454096 TAGGAGGTGATAGCATAAGGTCCTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379259 26 - 25927173 TAGGAGGTGATAGCATAAGGTCCTGG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365754 26 + 135778131 TAGGAGGTGATAGCGTAAGGTCCTGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929759 26 + 2368649 TAGGAGCTGATAGCATAAGGTCCTGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=163434.000000 s hg38.chr4_KI270789v1_alt 163909 47 + 205944 AAGAGAGAGG-GTTGTAGATTACATGATGTCCAAATAGGAGGTAATAG s panTro5.chr4 192950889 48 + 194502333 AAGACAAAGGTGTTGTAGATTACCTGATGTCCAATTAGGAGGTAATAG i panTro5.chr4 I 122 C 0 s panPan2.chr4 192834235 47 + 195804263 AAGAGAGAGG-GTTGTAGATTACATGATGTTCAAATAGAAGGTAACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870410 47 + 4876863 AAGAGAGAGG-GTTGTAGATTACATGATGTCCAAAGAGGAGGTAATAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112760986 47 + 115148730 AAGAGACAGG-GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045072 47 + 190429646 AAGAGAGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987959 47 + 189454096 AAGAGAGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379285 47 - 25927173 AAGAGAGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365780 47 + 135778131 ACGAGAGAGG-GTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929785 47 + 2368649 AAGAGAGAGG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i colAng1.NW_012116221v1 C 0 T 167 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=33920.000000 s hg38.chr4_KI270789v1_alt 163956 11 + 205944 TATAAGGTCCT s panTro5.chr4 192950937 11 + 194502333 CATAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834282 11 + 195804263 CATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870457 11 + 4876863 CATAAGGTCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761033 11 + 115148730 CATGAGGTCCT i nomLeu3.chr7b C 0 I 729 s rheMac8.chr5 189045119 11 + 190429646 CATAAGGTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988006 11 + 189454096 CATAAGGTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379332 11 - 25927173 CATAAGGTCCT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365827 11 + 135778131 CATAAGGTCCT i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=12698.000000 s hg38.chr4_KI270789v1_alt 163967 6 + 205944 GGAAGA s panTro5.chr4 192950948 6 + 194502333 GGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834293 6 + 195804263 CAAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870468 6 + 4876863 GGAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045130 6 + 190429646 GGAAGA i rheMac8.chr5 C 0 T 124 s macFas5.chr5 187988017 6 + 189454096 GGAAGA i macFas5.chr5 C 0 T 115 s macNem1.NW_012013133v1 24379343 6 - 25927173 GGAAGA i macNem1.NW_012013133v1 C 0 T 124 s chlSab2.chr7 134365838 6 + 135778131 GGGAGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761044 729 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1054.000000 s hg38.chr4_KI270789v1_alt 163973 2 + 205944 CA s panTro5.chr4 192950954 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834299 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870474 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s chlSab2.chr7 134365844 2 + 135778131 CA i chlSab2.chr7 C 0 T 109 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e macFas5.chr5 187988023 115 + 189454096 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761044 729 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1008.000000 s hg38.chr4_KI270789v1_alt 163975 4 + 205944 AATG s panTro5.chr4 192950956 4 + 194502333 AAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834301 4 + 195804263 AAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870476 4 + 4876863 AAGG i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e macFas5.chr5 187988023 115 + 189454096 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761044 729 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3730.000000 s hg38.chr4_KI270789v1_alt 163979 4 + 205944 TGTT s panTro5.chr4 192950960 4 + 194502333 TGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834305 4 + 195804263 TGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870480 4 + 4876863 TGTT i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987908 4 + 189454096 TGTT i macFas5.chr5 T 115 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761044 729 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=51480.000000 s hg38.chr4_KI270789v1_alt 163983 47 + 205944 GT-AGATAACCTGCTGTCCAAATAGGAGGAAATAGCATAAGGTCATGG s panTro5.chr4 192950964 48 + 194502333 GTTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834309 47 + 195804263 GT-AGATTACCTGATCTCCAAATAGGAGGAAATAGCATAAAGTCATGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870484 47 + 4876863 GT-AAATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761773 47 + 115148730 GT-AGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTG i nomLeu3.chr7b I 729 I 131 s macFas5.chr5 187987912 47 + 189454096 GT-AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 164030 1 + 205944 A s panTro5.chr4 192951012 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834356 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870531 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987959 1 + 189454096 A i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761820 131 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=6712.000000 s hg38.chr4_KI270789v1_alt 164031 9 + 205944 AGACAAAGG s panTro5.chr4 192951013 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834357 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870532 9 + 4876863 AGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761820 131 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=6490.000000 s hg38.chr4_KI270789v1_alt 164040 5 + 205944 TGTTG s panTro5.chr4 192951022 5 + 194502333 TGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834366 4 + 195804263 -GTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870541 5 + 4876863 TGTTG i gorGor5.CYUI01015356v1 C 0 I 324 s nomLeu3.chr7b 112761951 5 + 115148730 TGTTG i nomLeu3.chr7b I 131 C 0 s macFas5.chr5 187987908 5 + 189454096 TGTTG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11887.000000 s hg38.chr4_KI270789v1_alt 164045 18 + 205944 TGATTTACCTGATGCCCC s panTro5.chr4 192951027 18 + 194502333 TAGCTTATGTGATGTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834370 18 + 195804263 TAGATTACCTGATGTCCA i panPan2.chr4 C 0 T 419 s nomLeu3.chr7b 112761956 18 + 115148730 TAGATTACCTGATGTCCA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987913 18 + 189454096 TAGATTACCTGATGTCCA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e gorGor5.CYUI01015356v1 3870546 324 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=32281.000000 s hg38.chr4_KI270789v1_alt 164063 29 + 205944 AATAGGAGGTAATAGCATAAGGTCCTGGG s panTro5.chr4 192951045 29 + 194502333 AATAGGAGGTAATAGCATAAGGTCCTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833969 29 + 195804263 AATAGGAGGAAATAGCGTAAGGTCTTAGA i panPan2.chr4 T 419 C 0 s gorGor5.CYUI01015356v1 3870870 29 + 4876863 AATGGGAGGTAATAGCATAAGGTCCTGGG i gorGor5.CYUI01015356v1 I 324 C 0 s nomLeu3.chr7b 112761974 29 + 115148730 AATAGGAGGTAATAGCATAAGGTCCGCGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987931 29 + 189454096 CGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=10190.000000 s hg38.chr4_KI270789v1_alt 164092 9 + 205944 AGACAAAGG s panTro5.chr4 192951074 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833998 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 I 419 s gorGor5.CYUI01015356v1 3870899 9 + 4876863 AGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762003 9 + 115148730 AGAGAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52532.000000 s hg38.chr4_KI270789v1_alt 164101 46 + 205944 TGTTGTAGATTACCTGATGTCCAACTAGGAGGAAATGGCCTAAGGG s panTro5.chr4 192951083 46 + 194502333 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCCTAAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834426 46 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGC i panPan2.chr4 I 419 C 0 s gorGor5.CYUI01015356v1 3870908 46 + 4876863 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCGTAAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762012 46 + 115148730 TGTTGTAGATTACATGATGTCCAAGTAGGAGGTAATAGCATAAAGG i nomLeu3.chr7b C 0 T 238 s macFas5.chr5 187987908 46 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2804.000000 s hg38.chr4_KI270789v1_alt 164147 5 + 205944 CATGA s panTro5.chr4 192951129 5 + 194502333 CATGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834472 5 + 195804263 CCTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870954 5 + 4876863 CATGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987954 5 + 189454096 CCTGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112762058 238 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11280.000000 s hg38.chr4_KI270789v1_alt 164152 10 + 205944 AAGAGAGAGG s panTro5.chr4 192951134 10 + 194502333 AAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834477 10 + 195804263 AAGACAAAGG i panPan2.chr4 C 0 I 245 s gorGor5.CYUI01015356v1 3870959 10 + 4876863 AAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761820 10 + 115148730 GAGAGAGAGG i nomLeu3.chr7b T 238 C 0 s macFas5.chr5 187987959 10 + 189454096 AAGAGAGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=59961.000000 s hg38.chr4_KI270789v1_alt 164162 55 + 205944 GCACTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGTTTCTGGAAGAC s panTro5.chr4 192951144 55 + 194502333 GCACTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGTTCCTGGAAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834732 55 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCATAAGATCATGAAAGAG i panPan2.chr4 I 245 C 0 s gorGor5.CYUI01015356v1 3870969 55 + 4876863 GCACTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGTTCCTGGAAGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761830 55 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 T 542 s macFas5.chr5 187987969 55 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5419.000000 s hg38.chr4_KI270789v1_alt 164217 5 + 205944 AAAGG s panTro5.chr4 192951199 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834787 5 + 195804263 AGAGG i panPan2.chr4 C 0 I 3895 s gorGor5.CYUI01015356v1 3871024 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761343 4 + 115148730 -GAGG i nomLeu3.chr7b T 542 I 1 s macFas5.chr5 187988024 5 + 189454096 AGAGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=56201.000000 s hg38.chr4_KI270789v1_alt 164222 49 + 205944 TGTTGTAGATTACCTGAGGTCCAAATAGGAGTTAATAGCCTAAGGTCCG s panTro5.chr4 192951204 49 + 194502333 TGTTGTAGATTACCTGAGGTCCAAATAGGAGTTAATAGCCTAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838687 49 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCT i panPan2.chr4 I 3895 C 0 s gorGor5.CYUI01015356v1 3871029 49 + 4876863 TGTTGTAGATTACCTGAGGTCCAAATAGGAGTTAATAGCCTAAGGTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761348 49 + 115148730 AGTTGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i nomLeu3.chr7b I 1 T 118 s macFas5.chr5 187987908 49 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=10005.000000 s hg38.chr4_KI270789v1_alt 164271 9 + 205944 GGA--AGAGAG s panTro5.chr4 192951253 9 + 194502333 GGA--AGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838736 11 + 195804263 GGAAGAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871078 9 + 4876863 GGA--AGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761279 9 + 115148730 GGA--AGAGAA i nomLeu3.chr7b T 118 C 0 s macFas5.chr5 187987957 9 + 189454096 GGA--AGAGAG i macFas5.chr5 C 0 T 57 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1000.000000 s hg38.chr4_KI270789v1_alt 164280 1 + 205944 G s panTro5.chr4 192951262 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838747 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871087 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761288 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e macFas5.chr5 187987966 57 + 189454096 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=55697.000000 s hg38.chr4_KI270789v1_alt 164281 47 + 205944 GCAGTAGATTACCTGATGTTCAAACAGGAGGTAATAGCATAAGGTCC s panTro5.chr4 192951263 47 + 194502333 GCGGTAGATTACCTGATGTTCAAACAGGAGGTAATAGCATAAAGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838748 47 + 195804263 GCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCC i panPan2.chr4 C 0 T 3836 s gorGor5.CYUI01015356v1 3871088 47 + 4876863 GCAGTAGATTACCTGATGTTCAAATAGGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761289 47 + 115148730 GCTGTAGATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 47 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 T 57 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=29411.000000 s hg38.chr4_KI270789v1_alt 164328 26 + 205944 TGGAAGAGAGAGGGTTGTAGATTACA s panTro5.chr4 192951310 26 + 194502333 TGGAAGAGAGAGGGTTGTAGATTACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834959 26 + 195804263 TGGAAGAGAGAGGGTTGTAGATTACC i panPan2.chr4 T 3836 C 0 s gorGor5.CYUI01015356v1 3871135 26 + 4876863 TGGAAGAGAGATGGTTGTACATTACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761336 26 + 115148730 CGAAAGAGAGGGAGTTGTACATTACA i nomLeu3.chr7b C 0 I 88 s macFas5.chr5 187987956 26 + 189454096 TGGAAGAGAGAAGGTTGTAGATTACC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19928.000000 s hg38.chr4_KI270789v1_alt 164354 30 + 205944 TGATTTGTAAATAGGGGGTAATAGCATAAC s panTro5.chr4 192951336 30 + 194502333 TGATTTCTAAATAGGGGGTAATAGCATAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834985 30 + 195804263 CGATGTCCAGATAGGAGGTAATAGCATAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871161 30 + 4876863 TAATTTCTAAATAGGGGGTAATAGCATAAC i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987982 30 + 189454096 TGATGTCCACGTAGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e nomLeu3.chr7b 112761362 88 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=10470.000000 s hg38.chr4_KI270789v1_alt 164384 8 + 205944 GTCCTGGA s panTro5.chr4 192951366 8 + 194502333 GTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835015 8 + 195804263 GTCCTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871191 8 + 4876863 GTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761450 8 + 115148730 GTCCTGGA i nomLeu3.chr7b I 88 C 0 s macFas5.chr5 187988012 8 + 189454096 GTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=141796.000000 s hg38.chr4_KI270789v1_alt 164392 121 + 205944 AGACAAAGGTGTTGTGGATTACCTGATGTCCAAATAGGACGAAATAGCATAAGGTCCTGGAAGAAAGAGGGTAGCAAATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA s panTro5.chr4 192951374 121 + 194502333 AGACAAAGGCGTTGCGTATTACCTGATGTCCAAATAGGACAAAATAGCATAAGGTCCTGGAAGAAAGAGGGTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835023 120 + 195804263 AGAGAGA-GCGTTGCGGATTACCTGATGTCCAAATAGGACAAAATAGCATAAGGTCCTGGAAGAAAGAGGGTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871199 121 + 4876863 AGACAAAGGTGTTGCGGATTACCTGATGTCCAAATAGGAGGATATAGCATAAGGTCCTGGAAGAAAGAGGGTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 121 + 115148730 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 121 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929832 167 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 124 - 25927173 T e rheMac8.chr5 189045136 124 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=24256.000000 s hg38.chr4_KI270789v1_alt 164513 9 + 205944 AGAGAAAGG s panTro5.chr4 192951495 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835143 9 + 195804263 AGACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871320 9 + 4876863 AAACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761579 9 + 115148730 AGACAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045012 9 + 190429646 AGAGAAAGG i rheMac8.chr5 T 124 C 0 s macFas5.chr5 187988020 9 + 189454096 AGAGAGAGG i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379225 9 - 25927173 AGAGAAAGG i macNem1.NW_012013133v1 T 124 C 0 s colAng1.NW_012116221v1 929665 9 + 2368649 AGAGAAAGG i colAng1.NW_012116221v1 T 167 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=131001.000000 s hg38.chr4_KI270789v1_alt 164522 55 + 205944 TCTTGTAGACTACCTGATGTCC-------------------------------------------------------------AAATAGGATGTAATCGCATAAGGTTCTGGAACA s panTro5.chr4 192951504 55 + 194502333 TCTTGTAGACTACCTGATGTCC-------------------------------------------------------------AAATAGGATGTAATCGCATAAGGTTCTGGAACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835152 56 + 195804263 TCTTGTAGACTACCTGATGTCCA------------------------------------------------------------AAATAGGATGTAATCGCATAAGGTTCTGGAACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871329 116 + 4876863 TCTTGTAGACTACCTGATGTCCAAATAGGAGGTAATAGAATAAGGTTGTGGAAGACAAAGGTCTTGTACACTACCTGATGTCCAAATAGGATGTAATCGCATAAGGTTCTGGAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 55 + 115148730 TGTTGTAGATTACCTGATGTCC-------------------------------------------------------------AAATAGGACGTAATAGCATGAGGTCCTGGAAGA i nomLeu3.chr7b C 0 T 360 s rheMac8.chr5 189045021 55 + 190429646 TGTTGTAGATTACCTGATGTCC-------------------------------------------------------------ACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987908 55 + 189454096 TGTTGTAGATTACCTGATGTCC-------------------------------------------------------------ACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 T 121 C 0 s macNem1.NW_012013133v1 24379234 55 - 25927173 TGTTGTAGATTACCTGATGTCC-------------------------------------------------------------ACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929674 55 + 2368649 TGTTGTAGATTACCTGATGTCC-------------------------------------------------------------ACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=18278.000000 s hg38.chr4_KI270789v1_alt 164577 6 + 205944 GAGAGG s panTro5.chr4 192951559 6 + 194502333 GAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835208 6 + 195804263 GAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871445 6 + 4876863 GAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761283 6 + 115148730 GAGAAG i nomLeu3.chr7b T 360 C 0 s rheMac8.chr5 189045076 6 + 190429646 GAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987963 6 + 189454096 GAGAAG i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379289 6 - 25927173 GAGAAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929729 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=16425.000000 s hg38.chr4_KI270789v1_alt 164583 7 + 205944 GTTGCAT s panTro5.chr4 192951565 7 + 194502333 GTTGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835214 7 + 195804263 GTTGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871451 7 + 4876863 GTTGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761289 7 + 115148730 GCTGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 7 + 190429646 GTTGTAG i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187987909 7 + 189454096 GTTGTAG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379295 7 - 25927173 GTTGTAG i macNem1.NW_012013133v1 C 0 T 60 s colAng1.NW_012116221v1 929735 7 + 2368649 GTTGTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 109 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=153700.000000 s hg38.chr4_KI270789v1_alt 164590 44 + 205944 ATTACCTGATGTCCAAATAGCAGGTAAGAGCATAAGGTCCGGGA s panTro5.chr4 192951572 44 + 194502333 ATTACCTGATGTCCAAATAGCAGGTAAGAGCATAAGGTCCGGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835221 44 + 195804263 ATTACCTGATGTCCAAATAGCAGGTAAGAGCATAAGGTCCGGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871458 44 + 4876863 ATTACCTGATGTCCAAATAGCAGGTAAGAACATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761296 44 + 115148730 ATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCCGAA i nomLeu3.chr7b C 0 T 296 s rheMac8.chr5 189045029 44 + 190429646 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987916 44 + 189454096 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379242 44 - 25927173 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 T 60 C 0 s chlSab2.chr7 134365737 44 + 135778131 ATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGA i chlSab2.chr7 T 109 C 0 s colAng1.NW_012116221v1 929742 44 + 2368649 ATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=34257.000000 s hg38.chr4_KI270789v1_alt 164634 9 + 205944 AGAGAGAGG s panTro5.chr4 192951616 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835265 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871502 9 + 4876863 AGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761044 9 + 115148730 AGAGAGAGG i nomLeu3.chr7b T 296 C 0 s rheMac8.chr5 189045073 9 + 190429646 AGAGAGAAG i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187987960 9 + 189454096 AGAGAGAAG i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379286 9 - 25927173 AGAGAGAAG i macNem1.NW_012013133v1 C 0 T 60 s chlSab2.chr7 134365781 9 + 135778131 CGAGAGAGG i chlSab2.chr7 C 0 T 60 s colAng1.NW_012116221v1 929786 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=223293.000000 s hg38.chr4_KI270789v1_alt 164643 60 + 205944 GTTGTAGATTACCTGATGTCCAAGTAGGTGGTAATTGCATAAGGTCCTGGAAGAGAGAGG s panTro5.chr4 192951625 60 + 194502333 GTTGTAGATTACCTGATGTCCAAGTAGGTGGTAATTGCATAAGGTCCTGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835274 60 + 195804263 GTTGTAGATTACCTGATGTCCAAGTAGGTGGTAATTGCATAAGGTCCTGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871511 60 + 4876863 GTTGTAGATGACCTGATGTCCAAATGGGAGGTAATAGCATAAGATCCTGGAAGACAAAGG i gorGor5.CYUI01015356v1 C 0 I 1878 s nomLeu3.chr7b 112761053 60 + 115148730 GTTGTAGATTACCTGATGTCCAAGTAGGAGGTAATCACATAAGGTCCTGGAAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 60 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987909 60 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379235 60 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 T 60 C 0 s chlSab2.chr7 134365730 60 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG i chlSab2.chr7 T 60 C 0 s colAng1.NW_012116221v1 929795 60 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=26856.000000 s hg38.chr4_KI270789v1_alt 164703 7 + 205944 GTTGTAG s panTro5.chr4 192951685 7 + 194502333 GTTGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835334 7 + 195804263 GTTGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873449 7 + 4876863 GTTGTAG i gorGor5.CYUI01015356v1 I 1878 C 0 s nomLeu3.chr7b 112761113 7 + 115148730 GCTGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 7 + 190429646 GTTGTAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 7 + 189454096 GTTGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 7 - 25927173 GTTGTAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 7 + 135778131 GTTGTAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929855 7 + 2368649 GTTGTAG i colAng1.NW_012116221v1 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=24609.000000 s hg38.chr4_KI270789v1_alt 164710 7 + 205944 ATGACCT s panTro5.chr4 192951692 7 + 194502333 ATGACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835341 7 + 195804263 ATGACCT i panPan2.chr4 C 0 I 2564 s gorGor5.CYUI01015356v1 3873456 7 + 4876863 ATTACCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761120 7 + 115148730 ATGACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045089 7 + 190429646 ATTACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987976 7 + 189454096 ATTACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379302 7 - 25927173 ATTACCT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365797 7 + 135778131 ATTACCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929802 7 + 2368649 ATTACCT i colAng1.NW_012116221v1 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=143008.000000 s hg38.chr4_KI270789v1_alt 164717 39 + 205944 GATGTCCAAATGGGAGGTAATAGCATAAGATCCTGGAAG s panTro5.chr4 192951699 39 + 194502333 GATGTCCAAATGGGAGGTAATAGCATAAGATCCTGGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837912 39 + 195804263 GATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAG i panPan2.chr4 I 2564 C 0 s gorGor5.CYUI01015356v1 3873463 39 + 4876863 GATTTCCAAATAGAAGGTAATAGCATAAGGTCCTGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761127 39 + 115148730 GATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAG i nomLeu3.chr7b C 0 I 294 s rheMac8.chr5 189045096 39 + 190429646 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987983 39 + 189454096 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379309 39 - 25927173 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365804 39 + 135778131 GATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929809 39 + 2368649 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4095.000000 s hg38.chr4_KI270789v1_alt 164756 1 + 205944 A s panTro5.chr4 192951738 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837951 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873502 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761460 1 + 115148730 A i nomLeu3.chr7b I 294 C 0 s rheMac8.chr5 189045135 1 + 190429646 A i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988022 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379348 1 - 25927173 A i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365843 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929848 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=10771.000000 s hg38.chr4_KI270789v1_alt 164757 6 + 205944 CAAAGG s panTro5.chr4 192951739 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837952 6 + 195804263 GAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873503 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761461 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s chlSab2.chr7 134365844 6 + 135778131 CAGAGG i chlSab2.chr7 C 0 T 126 s colAng1.NW_012116221v1 929849 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5070.000000 s hg38.chr4_KI270789v1_alt 164763 5 + 205944 TGTTG s panTro5.chr4 192951745 5 + 194502333 TGTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837958 5 + 195804263 GCTTA i panPan2.chr4 C 0 I 122 s gorGor5.CYUI01015356v1 3873509 5 + 4876863 TTTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761467 5 + 115148730 TGTTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 5 + 189454096 TGTTG i macFas5.chr5 T 121 C 0 s colAng1.NW_012116221v1 929855 4 + 2368649 -GTTG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=70991.000000 s hg38.chr4_KI270789v1_alt 164768 43 + 205944 TAGATTACCTGAAGTCCAAACAGGAGGTAATGGCATAAGGTCC s panTro5.chr4 192951750 43 + 194502333 TAGATTACCTGAAGTCCAAACTGGAGGTAATGGCATAAGGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838085 43 + 195804263 TAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCA i panPan2.chr4 I 122 C 0 s gorGor5.CYUI01015356v1 3873514 43 + 4876863 TAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761472 43 + 115148730 TAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i nomLeu3.chr7b C 0 I 484 s macFas5.chr5 187987913 43 + 189454096 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929859 43 + 2368649 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=681.000000 s hg38.chr4_KI270789v1_alt 164811 1 + 205944 T s panTro5.chr4 192951793 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838128 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873557 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761999 1 + 115148730 G i nomLeu3.chr7b I 484 C 0 s macFas5.chr5 187987956 1 + 189454096 T i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929902 1 + 2368649 T i colAng1.NW_012116221v1 C 0 T 234 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8552.000000 s hg38.chr4_KI270789v1_alt 164812 12 + 205944 CGAGAACAAAGG s panTro5.chr4 192951794 12 + 194502333 CGAAAACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838129 12 + 195804263 GGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873558 12 + 4876863 GGAAGATAAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762000 12 + 115148730 CGAAGAGAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987957 12 + 189454096 GGAAGAGAGAAG i macFas5.chr5 C 0 T 70 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5156.000000 s hg38.chr4_KI270789v1_alt 164824 6 + 205944 TGTTGT s panTro5.chr4 192951806 6 + 194502333 TGTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838141 5 + 195804263 -GTTGT i panPan2.chr4 C 0 T 183 s gorGor5.CYUI01015356v1 3873570 6 + 4876863 TGTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762012 6 + 115148730 TGTTGT i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 70 + 189454096 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=18242.000000 s hg38.chr4_KI270789v1_alt 164830 24 + 205944 AGATTACCTGATGTCCAAA-TAGGA s panTro5.chr4 192951812 24 + 194502333 AGATTACCTGATGTCCAAA-TAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837963 25 + 195804263 AGATAACCTGATGTCCAAAGTAGGA i panPan2.chr4 T 183 I 4 s gorGor5.CYUI01015356v1 3873576 24 + 4876863 AGATTACCTGGTGTCCAAA-TAGGA i gorGor5.CYUI01015356v1 C 0 T 3026 s nomLeu3.chr7b 112762018 24 + 115148730 AGATTACATGATGTCCAAG-TAGGA i nomLeu3.chr7b C 0 T 752 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 70 + 189454096 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8559.000000 s hg38.chr4_KI270789v1_alt 164854 19 + 205944 AATAGCATAAGGTCCTGGA s panTro5.chr4 192951836 19 + 194502333 AATAGTATAAGGTTCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837992 19 + 195804263 AATAGCATAAGGTCTTGGA i panPan2.chr4 I 4 C 0 s gorGor5.CYUI01015356v1 3870574 19 + 4876863 AATAGCATAAGGTCCTCAA i gorGor5.CYUI01015356v1 T 3026 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 70 + 189454096 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762042 752 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6502.000000 s hg38.chr4_KI270789v1_alt 164873 11 + 205944 AGACAAAGGTG s panTro5.chr4 192951855 11 + 194502333 AGACAAAGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838011 10 + 195804263 AGAGAGAGGT- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870593 11 + 4876863 AGACAAAGGTG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987899 11 + 189454096 AGAGAAAGGTG i macFas5.chr5 T 70 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762042 752 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=57543.000000 s hg38.chr4_KI270789v1_alt 164884 51 + 205944 TTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGCCCCGGAA s panTro5.chr4 192951866 51 + 194502333 TTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGCCCTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838021 51 + 195804263 TTGTAGATATCATGATGTTCTAATAGAAGGTAACAGCATAAGGTCCTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870604 51 + 4876863 TTGTAGATTACCTGATGTCCAATTAGGAGGTAATAACATAAGGTCCTGGAA i gorGor5.CYUI01015356v1 C 0 I 1149 s nomLeu3.chr7b 112761290 51 + 115148730 CTGTAGATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCCGAAA i nomLeu3.chr7b T 752 C 0 s macFas5.chr5 187987910 51 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3320.000000 s hg38.chr4_KI270789v1_alt 164935 4 + 205944 GACA s panTro5.chr4 192951917 4 + 194502333 GACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838072 4 + 195804263 GGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871804 4 + 4876863 GACA i gorGor5.CYUI01015356v1 I 1149 C 0 s nomLeu3.chr7b 112761341 4 + 115148730 GAGA i nomLeu3.chr7b C 0 I 58 s macFas5.chr5 187987961 4 + 189454096 GAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2735.000000 s hg38.chr4_KI270789v1_alt 164939 4 + 205944 GAGG s panTro5.chr4 192951921 4 + 194502333 AAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838076 4 + 195804263 AAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871808 4 + 4876863 AAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761403 3 + 115148730 -GAG i nomLeu3.chr7b I 58 C 0 s macFas5.chr5 187987965 4 + 189454096 GAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=63797.000000 s hg38.chr4_KI270789v1_alt 164943 56 + 205944 TGTTGTAGATTAGCTGATGTCCAAATAGCAGGTAATAGCATAAGGTCCTGGAATAC s panTro5.chr4 192951925 56 + 194502333 TGTTGTAGATTAGCTGATGTCCAAATAGAAGGTAACAGCATAAGGTCCTGGAATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838080 56 + 195804263 TATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGAAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871812 56 + 4876863 TGTTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGTCCTGGAATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761406 56 + 115148730 GGCTGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 56 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=256828.000000 s hg38.chr4_KI270789v1_alt 164999 73 + 205944 AAAGGTGTTGTAGTTTACCTGATGTCCAAATAAGAGGTAATAGCATAAGGACCTGCAAGAGAGAGG-GTTGTAG s panTro5.chr4 192951981 73 + 194502333 AAAGGTGTTGTAGTTTACCTGATGTCCAAATAAGAGGTAATAGCATAAGGTCCTGCAAGAGAGAGG-GTTGTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838136 73 + 195804263 AGAGG-GTTGTCGATTACCTGATGTCCAAATAGGAGGTAATACCGTAAGGTCCTGGAAGACACAGGTGTTGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871868 73 + 4876863 AAAGGTGTTGTAGTTTACCTGATGTCCAAATAAGTGGTAATAGCATAAGGTCCTGCAAGAGAGAGG-GTTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761462 73 + 115148730 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGG-GTTGTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 73 + 190429646 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG-GTTGTAG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 73 + 189454096 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG-GTTGTAG i macFas5.chr5 T 61 C 0 s macNem1.NW_012013133v1 24379229 73 - 25927173 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG-GTTGTAG i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365724 73 + 135778131 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG-GTTGTAG i chlSab2.chr7 T 126 C 0 s colAng1.NW_012116221v1 929669 73 + 2368649 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGG-GTTGTAG i colAng1.NW_012116221v1 T 234 T 73 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=121790.000000 s hg38.chr4_KI270789v1_alt 165072 40 + 205944 ATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC s panTro5.chr4 192952054 40 + 194502333 ATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838209 40 + 195804263 ATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGATCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871941 40 + 4876863 ATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761535 40 + 115148730 ATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045089 40 + 190429646 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i rheMac8.chr5 C 0 T 100 s macFas5.chr5 187987976 40 + 189454096 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379302 40 - 25927173 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macNem1.NW_012013133v1 C 0 T 100 s chlSab2.chr7 134365797 40 + 135778131 ATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCC i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929742 73 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=10335.000000 s hg38.chr4_KI270789v1_alt 165112 8 + 205944 TGAGAGAC s panTro5.chr4 192952094 8 + 194502333 TGAGAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838249 8 + 195804263 TCAAAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871981 8 + 4876863 TGGGAGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761575 8 + 115148730 TGGAAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988016 8 + 189454096 TGGAAGAG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134365837 8 + 135778131 TGGGAGAC i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929742 73 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8856.000000 s hg38.chr4_KI270789v1_alt 165120 5 + 205944 AAAGG s panTro5.chr4 192952102 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838257 5 + 195804263 CAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871989 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761583 5 + 115148730 AAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988024 5 + 189454096 AGAGG i macFas5.chr5 C 0 T 121 s chlSab2.chr7 134365845 5 + 135778131 AGAGG i chlSab2.chr7 C 0 T 113 s colAng1.NW_012116221v1 929669 5 + 2368649 AAAGG i colAng1.NW_012116221v1 T 73 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=77140.000000 s hg38.chr4_KI270789v1_alt 165125 48 + 205944 TGTTGTACATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCA s panTro5.chr4 192952107 48 + 194502333 TGTTGTACATTACCTGATGTCGAAATAGGAGGAAATAGCATAAGGTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838262 48 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGGAATAGCATAAGGTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871994 48 + 4876863 TGTTGTACATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 48 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 48 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 T 121 C 0 s colAng1.NW_012116221v1 929674 48 + 2368649 TGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCC i colAng1.NW_012116221v1 C 0 I 12 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7095.000000 s hg38.chr4_KI270789v1_alt 165173 5 + 205944 TGGAA s panTro5.chr4 192952155 5 + 194502333 TGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838310 5 + 195804263 TGGAA i panPan2.chr4 C 0 T 4260 s gorGor5.CYUI01015356v1 3872042 5 + 4876863 TGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761636 5 + 115148730 TGGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987956 5 + 189454096 TGGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929722 12 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5306.000000 s hg38.chr4_KI270789v1_alt 165178 7 + 205944 GAGAGAG s panTro5.chr4 192952160 7 + 194502333 GAGAGAG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872047 7 + 4876863 GAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761641 7 + 115148730 GACAGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987961 7 + 189454096 GAGAGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929722 12 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e panPan2.chr4 192838315 4260 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=53352.000000 s hg38.chr4_KI270789v1_alt 165185 48 + 205944 AGCAGTAGATTACCTGATGTCCAAACAGGAGTTAATAGCATAAAGTCC s panTro5.chr4 192952167 48 + 194502333 AGCAGTAGATTACCTGATGTCCAAACAGGAGTTAATAGCGTAAAGTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872054 48 + 4876863 AGCGGTAGATTACCTGATGTCCAAACAGGAGTTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761648 48 + 115148730 GGCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCC i nomLeu3.chr7b C 0 I 181 s macFas5.chr5 187987968 48 + 189454096 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929734 48 + 2368649 GGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCC i colAng1.NW_012116221v1 I 12 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e panPan2.chr4 192838315 4260 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3295.000000 s hg38.chr4_KI270789v1_alt 165233 3 + 205944 TGG s panTro5.chr4 192952215 3 + 194502333 TGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872102 3 + 4876863 TTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761877 3 + 115148730 TGG i nomLeu3.chr7b I 181 I 1 s macFas5.chr5 187988016 3 + 189454096 TGG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929782 3 + 2368649 TGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e panPan2.chr4 192838315 4260 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=14350.000000 s hg38.chr4_KI270789v1_alt 165236 12 + 205944 GGGAGAGAGGGT s panTro5.chr4 192952218 12 + 194502333 GAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834055 12 + 195804263 GGAAGGGAGGGC i panPan2.chr4 T 4260 C 0 s gorGor5.CYUI01015356v1 3872105 12 + 4876863 GAGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761881 12 + 115148730 AGACAAAAGTGT i nomLeu3.chr7b I 1 C 0 s macFas5.chr5 187988019 12 + 189454096 AAGAGAGAGGGT i macFas5.chr5 C 0 T 99 s colAng1.NW_012116221v1 929785 12 + 2368649 AAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 165248 1 + 205944 T s panTro5.chr4 192952230 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834067 1 + 195804263 T i panPan2.chr4 C 0 I 4260 s gorGor5.CYUI01015356v1 3872117 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761893 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 929797 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e macFas5.chr5 187988031 99 + 189454096 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=21698.000000 s hg38.chr4_KI270789v1_alt 165249 18 + 205944 GTAGATTACTTGATATCC s panTro5.chr4 192952231 18 + 194502333 GTAGATTACCTGATATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838328 18 + 195804263 TTACATTACCTGATATCC i panPan2.chr4 I 4260 I 1 s gorGor5.CYUI01015356v1 3872118 18 + 4876863 GTAGATTACCTGATATCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761894 18 + 115148730 GTAGATTACCTGATGTCC i nomLeu3.chr7b C 0 T 601 s colAng1.NW_012116221v1 929798 18 + 2368649 GTAGATTACCTGATGTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e macFas5.chr5 187988031 99 + 189454096 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 165267 1 + 205944 A s panTro5.chr4 192952249 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838347 1 + 195804263 A i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3872136 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761311 1 + 115148730 A i nomLeu3.chr7b T 601 C 0 s colAng1.NW_012116221v1 929816 1 + 2368649 A i colAng1.NW_012116221v1 C 0 T 139 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e macFas5.chr5 187988031 99 + 189454096 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=100848.000000 s hg38.chr4_KI270789v1_alt 165268 88 + 205944 ATAGGAGGTAATAGCATAAGGTCCTGCAAGAGAGAGG-GTTGTAGGTTATCTGATGTCGAAATAGGAGGCAGTAGCATAAGGTCCTGGG s panTro5.chr4 192952250 88 + 194502333 ATAGGAGGTAATAGCATAAGGTCCTGCAAGAGAGAGG-GTTGTAGGTTATCTGATGTCAAAATAGGAGGCAATAGCATAAGGTCCTGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838348 89 + 195804263 ATAGGAGGTAATAGCATAAGGTCCTCGAAGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872137 88 + 4876863 ATAGGAGGTAATAGCATAAGGTCCTGCAAGAGAGAGG-GTTGTAGGTTATCTGATGTCCAAATAGGAGGTAATACCTTAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761312 88 + 115148730 ATAGGAGGTAATAGCATAAGGTCCCGAAAGAGAGGGA-GTTGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987932 88 + 189454096 GTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 99 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929817 139 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4230.000000 s hg38.chr4_KI270789v1_alt 165356 3 + 205944 AGA s panTro5.chr4 192952338 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838437 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872225 3 + 4876863 AGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761400 3 + 115148730 AGA i nomLeu3.chr7b C 0 I 360 s macFas5.chr5 187987899 3 + 189454096 AGA i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929817 139 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=76133.000000 s hg38.chr4_KI270789v1_alt 165359 66 + 205944 CAAAGGTGTTGTAGATTACGTGATGTCCAAATAGGAGGAAATAGCTTAAGGTCTTCGAAGAGAGAG s panTro5.chr4 192952341 66 + 194502333 CAAAGGTGTTGTAGATTACGTGATGTCCAAATAGGAGGAAATAGCGTAAGGTTTTAGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838440 66 + 195804263 CAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872228 66 + 4876863 CACAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCTTGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761763 66 + 115148730 CAAAGGTGTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGAGAGAGAG i nomLeu3.chr7b I 360 T 659 s macFas5.chr5 187987902 66 + 189454096 GAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929817 139 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3284.000000 s hg38.chr4_KI270789v1_alt 165425 4 + 205944 GGCA s panTro5.chr4 192952407 4 + 194502333 GGCA i panTro5.chr4 C 0 I 58 s panPan2.chr4 192838506 4 + 195804263 GGCT i panPan2.chr4 C 0 T 4442 s gorGor5.CYUI01015356v1 3872294 4 + 4876863 GGCA i gorGor5.CYUI01015356v1 C 0 I 1757 s nomLeu3.chr7b 112761170 4 + 115148730 GGCT i nomLeu3.chr7b T 659 C 0 s macFas5.chr5 187987968 4 + 189454096 GGTT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929817 139 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=63310.000000 s hg38.chr4_KI270789v1_alt 165429 44 + 205944 GTAGATTACCTGATGTCCAAATAGGATTTAATAGCATACGATCA s panTro5.chr4 192952469 44 + 194502333 GTAGATTACCTGATGTCCAAATAGGATTTAATAGCATATGATCA i panTro5.chr4 I 58 C 0 s panPan2.chr4 192834068 44 + 195804263 GTAGATTACCTGATGTCCAAATAGGATTTAATAGCATATGATCA i panPan2.chr4 T 4442 C 0 s gorGor5.CYUI01015356v1 3874055 44 + 4876863 GTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 I 1757 C 0 s nomLeu3.chr7b 112761174 44 + 115148730 GTAGATTACCTGATGTTCAAATAGGAGGTAATAGCATAAGATAC i nomLeu3.chr7b C 0 I 478 s macFas5.chr5 187987972 44 + 189454096 GTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929678 44 + 2368649 GTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCC i colAng1.NW_012116221v1 T 139 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=20580.000000 s hg38.chr4_KI270789v1_alt 165473 12 + 205944 TGGAAGAGAGAG s panTro5.chr4 192952513 12 + 194502333 TGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834112 12 + 195804263 TGGAAGAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874099 12 + 4876863 TGGAAGACAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761696 12 + 115148730 TGGAAGAGAGAC i nomLeu3.chr7b I 478 T 538 s macFas5.chr5 187988016 12 + 189454096 TGGAAGAGAGAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929722 12 + 2368649 TGGAAGAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1314.000000 s hg38.chr4_KI270789v1_alt 165485 1 + 205944 G s panTro5.chr4 192952525 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834124 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874111 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 I 1 s nomLeu3.chr7b 112761170 1 + 115148730 G i nomLeu3.chr7b T 538 C 0 s macFas5.chr5 187988028 1 + 189454096 G i macFas5.chr5 C 0 T 120 s colAng1.NW_012116221v1 929734 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=89906.000000 s hg38.chr4_KI270789v1_alt 165486 57 + 205944 GCTGTAGATGACATGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAG s panTro5.chr4 192952526 57 + 194502333 GCTGTAGATGACGTGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834125 57 + 195804263 GCTGTAGATGACGTGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874113 57 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAATAGCATAAGGTCCTGGAAAAGAG i gorGor5.CYUI01015356v1 I 1 T 1700 s nomLeu3.chr7b 112761171 57 + 115148730 GCTGTAGATTACCTGATGTTCAAATAGGAGGTAATAGCATAAGATACAAGAAGAGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 57 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 T 120 C 0 s colAng1.NW_012116221v1 929735 57 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5325.000000 s hg38.chr4_KI270789v1_alt 165543 3 + 205944 AGG s panTro5.chr4 192952583 3 + 194502333 AGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834182 3 + 195804263 AGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872470 3 + 4876863 AGG i gorGor5.CYUI01015356v1 T 1700 C 0 s nomLeu3.chr7b 112761228 3 + 115148730 AGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987966 3 + 189454096 AAG i macFas5.chr5 C 0 T 60 s colAng1.NW_012116221v1 929792 3 + 2368649 AGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4085.000000 s hg38.chr4_KI270789v1_alt 165546 7 + 205944 GCATTAC s panTro5.chr4 192952586 7 + 194502333 GCATTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834185 7 + 195804263 GCATTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872473 7 + 4876863 GCATTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761231 7 + 115148730 GCTGTAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 5 + 189454096 --GTTGT i macFas5.chr5 T 60 I 2 s colAng1.NW_012116221v1 929795 5 + 2368649 --GTTGT i colAng1.NW_012116221v1 C 0 T 58 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 113 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379342 100 - 25927173 T e rheMac8.chr5 189045129 100 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=253928.000000 s hg38.chr4_KI270789v1_alt 165553 78 + 205944 ATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACATGATGTT-------------------------------------------------------------CAAAT s panTro5.chr4 192952593 139 + 194502333 ATTACGTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACATGATGTTCAAATAGAAGGTAACAGCATAAGGTCCTCAAAGACAAAGTTGTTGTAGATTACCTGATCTCCAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834192 139 + 195804263 ATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACATGATGTTCAAATAGAAGGTAACAGCATAAGGTCCTCAAAGACAAAGTTGTTGTAGATTACCTGATCTCCAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872480 78 + 4876863 ATTACCTGACGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACATGATATT-------------------------------------------------------------CAAAT i gorGor5.CYUI01015356v1 C 0 I 61 s nomLeu3.chr7b 112761238 76 + 115148730 ATGACCTGATGTCCAAGTAGGAGGTAATAGCATAAGCTCCTGGA--AGAGAAGGCTGTAGATTACCTGATGTG-------------------------------------------------------------CAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045029 78 + 190429646 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTC-------------------------------------------------------------CACGT i rheMac8.chr5 T 100 C 0 s macFas5.chr5 187987916 78 + 189454096 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTC-------------------------------------------------------------CACGT i macFas5.chr5 I 2 C 0 s macNem1.NW_012013133v1 24379242 78 - 25927173 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTC-------------------------------------------------------------CACGT i macNem1.NW_012013133v1 T 100 C 0 s chlSab2.chr7 134365737 78 + 135778131 ATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGGGTTGTAGATTACCTGATGTC-------------------------------------------------------------CACGT i chlSab2.chr7 T 113 C 0 s colAng1.NW_012116221v1 929742 78 + 2368649 ATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACCTGATGTC-------------------------------------------------------------CACGT i colAng1.NW_012116221v1 T 58 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=133546.000000 s hg38.chr4_KI270789v1_alt 165631 37 + 205944 AGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGGGT s panTro5.chr4 192952732 37 + 194502333 AGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834331 37 + 195804263 AGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872619 37 + 4876863 AGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGGGT i gorGor5.CYUI01015356v1 I 61 C 0 s nomLeu3.chr7b 112761314 37 + 115148730 AGGAGGTAATAGCATAAGGTCCCGAAAGAGAGGGAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045107 37 + 190429646 AGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187987994 37 + 189454096 AGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379320 37 - 25927173 AGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i macNem1.NW_012013133v1 C 0 T 60 s chlSab2.chr7 134365815 37 + 135778131 GGGAGGTGATAGCATAAGGTCCTGGGAGACAGAGGGT i chlSab2.chr7 C 0 T 128 s colAng1.NW_012116221v1 929820 37 + 2368649 AGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=86057.000000 s hg38.chr4_KI270789v1_alt 165668 29 + 205944 TGTAGATTACCTGATGTCCAAATAGGAGG s panTro5.chr4 192952769 29 + 194502333 TGTAGATTACCTGATGTCCAAATAGAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834368 29 + 195804263 TGTAGATTACCTGATGTCCAAATAGAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872656 29 + 4876863 TGTAGATTACCTGATGTTCAAATAGGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761351 29 + 115148730 TGTACATTACATGATGTCCAAATAGGAGG i nomLeu3.chr7b C 0 I 87 s rheMac8.chr5 189045084 29 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGG i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987971 29 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379297 29 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGG i macNem1.NW_012013133v1 T 60 C 0 s colAng1.NW_012116221v1 929857 29 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=11142.000000 s hg38.chr4_KI270789v1_alt 165697 8 + 205944 TAATACTG s panTro5.chr4 192952798 8 + 194502333 TAATACCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834397 8 + 195804263 TAATACCG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872685 8 + 4876863 TAATACGG i gorGor5.CYUI01015356v1 C 0 T 1806 s rheMac8.chr5 189045113 8 + 190429646 TGATAGCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988000 8 + 189454096 TGATAGCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379326 8 - 25927173 TGATAGCA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929886 8 + 2368649 TGATAGCG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761380 87 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=36553.000000 s hg38.chr4_KI270789v1_alt 165705 15 + 205944 TAAGGTCCTGGAAGA s panTro5.chr4 192952806 15 + 194502333 TAAGGTCCTGTAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834405 15 + 195804263 TAAGGTCCTGTAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870887 15 + 4876863 TAAGGTCCTGGGAGA i gorGor5.CYUI01015356v1 T 1806 C 0 s rheMac8.chr5 189045121 15 + 190429646 TAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988008 15 + 189454096 TAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379334 15 - 25927173 TAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 120 s colAng1.NW_012116221v1 929894 15 + 2368649 TAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 T 114 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761380 87 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1472.000000 s hg38.chr4_KI270789v1_alt 165720 4 + 205944 CACA s panTro5.chr4 192952821 4 + 194502333 CACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834420 4 + 195804263 CACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870902 4 + 4876863 CAAA i gorGor5.CYUI01015356v1 C 0 I 1806 s macFas5.chr5 187988023 4 + 189454096 GAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761380 87 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2000.000000 s hg38.chr4_KI270789v1_alt 165724 2 + 205944 GG s panTro5.chr4 192952825 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834424 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872712 2 + 4876863 GG i gorGor5.CYUI01015356v1 I 1806 C 0 s macFas5.chr5 187988027 2 + 189454096 GG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761380 87 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=16785.000000 s hg38.chr4_KI270789v1_alt 165726 12 + 205944 TGTTGTAGATTA s panTro5.chr4 192952827 12 + 194502333 TGTTGTAGATTA i panTro5.chr4 C 0 I 1444 s panPan2.chr4 192834426 12 + 195804263 TGTTGTAGATTA i panPan2.chr4 C 0 I 3775 s gorGor5.CYUI01015356v1 3872714 12 + 4876863 TGTTGTAGATTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761467 12 + 115148730 TGTTGTAGATTA i nomLeu3.chr7b I 87 C 0 s macFas5.chr5 187987908 12 + 189454096 TGTTGTAGATTA i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=47385.000000 s hg38.chr4_KI270789v1_alt 165738 37 + 205944 CCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCTT s panTro5.chr4 192954283 37 + 194502333 CCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panTro5.chr4 I 1444 C 0 s panPan2.chr4 192838213 37 + 195804263 CCTGATGTCCAAATAGGAGGTAATAGCATAAGATCCT i panPan2.chr4 I 3775 C 0 s gorGor5.CYUI01015356v1 3872726 37 + 4876863 CCTGATGTCCAAATAGAAGGTAATAGCATAAGGTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761479 37 + 115148730 CCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i nomLeu3.chr7b C 0 I 121 s macFas5.chr5 187987920 37 + 189454096 CCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2585.000000 s hg38.chr4_KI270789v1_alt 165775 3 + 205944 GGA s panTro5.chr4 192954320 3 + 194502333 GGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838250 3 + 195804263 CAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872763 3 + 4876863 GGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761637 3 + 115148730 GGA i nomLeu3.chr7b I 121 C 0 s macFas5.chr5 187987957 3 + 189454096 GGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=13385.000000 s hg38.chr4_KI270789v1_alt 165778 16 + 205944 AGACAAAGTTGTTGTA s panTro5.chr4 192954323 16 + 194502333 AGACAAAGGTGTTGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838253 16 + 195804263 AGACCAAGTTGTTGTA i panPan2.chr4 C 0 T 3831 s gorGor5.CYUI01015356v1 3872766 16 + 4876863 ATACGAAGGTGTTGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761640 15 + 115148730 AGACAGAGG-GCTGTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 16 + 189454096 AGAGAAAGGTGTTGTA i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3296.000000 s hg38.chr4_KI270789v1_alt 165794 5 + 205944 GATTG s panTro5.chr4 192954339 5 + 194502333 GATTA i panTro5.chr4 C 0 T 1505 s gorGor5.CYUI01015356v1 3872782 5 + 4876863 GTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761655 5 + 115148730 GATTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987915 5 + 189454096 GATTA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e panPan2.chr4 192838269 3831 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=57718.000000 s hg38.chr4_KI270789v1_alt 165799 49 + 205944 CCTGATGTCCAAATAGAAGGTAATAGCATAAGGCCCTGGAAGACAAAGG s panTro5.chr4 192952839 49 + 194502333 CCTGATGTCCAAATAGAAGGTAATAGCATAAGGCCCTGGAAGACAAAGG i panTro5.chr4 T 1505 C 0 s panPan2.chr4 192834438 49 + 195804263 CCTGATGTCCAAATAGAAGGTAATAGCATAAGGCCCTGGAAGACAAAGG i panPan2.chr4 T 3831 C 0 s gorGor5.CYUI01015356v1 3872787 49 + 4876863 CCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAATACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761660 49 + 115148730 CATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAGAGACG i nomLeu3.chr7b C 0 T 60 s macFas5.chr5 187987920 49 + 189454096 CCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 165848 1 + 205944 T s panTro5.chr4 192952888 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834487 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872836 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 I 125 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761709 60 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=54002.000000 s hg38.chr4_KI270789v1_alt 165849 51 + 205944 GTTATAGATTACTTGATGACTAAATAGGAGATAATAGCATAAAGTTCTTGA s panTro5.chr4 192952889 51 + 194502333 GTTATAGATTACCTGATGACTAAATAGGAGATAATAGCATAAGGTCCTTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834488 51 + 195804263 GTTATAGATTACCTGATGACTAAATAGGAGATAATAGCATAAGGTCCTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872962 51 + 4876863 GTTGTAGATTACATGATTTCTAAATAGGGGGTAATAGCCTAACGTCCTGGA i gorGor5.CYUI01015356v1 I 125 C 0 s nomLeu3.chr7b 112761649 51 + 115148730 GCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i nomLeu3.chr7b T 60 C 0 s macFas5.chr5 187987909 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7685.000000 s hg38.chr4_KI270789v1_alt 165900 8 + 205944 AGAAAAAG s panTro5.chr4 192952940 8 + 194502333 AGAAAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834539 8 + 195804263 AGAAAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873013 8 + 4876863 AGACAAAG i gorGor5.CYUI01015356v1 C 0 T 182 s nomLeu3.chr7b 112761700 8 + 115148730 AGAGAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 8 + 189454096 AGAGAAAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=398.000000 s hg38.chr4_KI270789v1_alt 165908 1 + 205944 A s panTro5.chr4 192952948 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834547 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872839 1 + 4876863 A i gorGor5.CYUI01015356v1 T 182 C 0 s nomLeu3.chr7b 112761708 1 + 115148730 G i nomLeu3.chr7b C 0 I 306 s macFas5.chr5 187987907 1 + 189454096 G i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2332.000000 s hg38.chr4_KI270789v1_alt 165909 3 + 205944 TGT s panTro5.chr4 192952949 3 + 194502333 TGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834548 3 + 195804263 TGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872840 3 + 4876863 CGT i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987908 3 + 189454096 TGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761709 306 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=59930.000000 s hg38.chr4_KI270789v1_alt 165912 52 + 205944 TCTGGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAA-GTCATGGAAGA s panTro5.chr4 192952952 52 + 194502333 TCTGGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAA-GTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834551 52 + 195804263 TCTGGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAA-GTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872843 52 + 4876863 TGTAGTTTACCTGATGTTCAAATAGGAGGTAATAGCATAAG-GTCCTGGAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762015 53 + 115148730 TGTAGATTACATGATGTCCAAGTAGGAGGTAATAGCATAAAGGTCCTGGAAGA i nomLeu3.chr7b I 306 T 354 s macFas5.chr5 187987911 52 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAG-GTCCTGGAAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3818.000000 s hg38.chr4_KI270789v1_alt 165964 6 + 205944 CAAAGG s panTro5.chr4 192953004 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834603 6 + 195804263 CAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872895 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987963 6 + 189454096 GAGAAG i macFas5.chr5 C 0 I 4 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762068 354 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2238.000000 s hg38.chr4_KI270789v1_alt 165970 4 + 205944 TGTT s panTro5.chr4 192953010 4 + 194502333 TGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834609 4 + 195804263 TGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872901 4 + 4876863 TGTT i gorGor5.CYUI01015356v1 C 0 I 181 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 4 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762068 354 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=141.000000 s hg38.chr4_KI270789v1_alt 165974 2 + 205944 GT s panTro5.chr4 192953014 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834613 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873086 1 + 4876863 -G i gorGor5.CYUI01015356v1 I 181 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 4 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762068 354 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 165976 1 + 205944 T s panTro5.chr4 192953016 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834615 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873087 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987973 1 + 189454096 T i macFas5.chr5 I 4 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762068 354 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52481.000000 s hg38.chr4_KI270789v1_alt 165977 46 + 205944 AGATTACCTGATGTCCAAATAGGAGATAATAGCATAAGGTCCTCAA s panTro5.chr4 192953017 46 + 194502333 AGATTACCTGATGTCCAAATAGGAGATAATAGCATAAGGTCCTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834616 46 + 195804263 AGATTACCTGATGTCCAAATAGGAGATAATAGCATAAGGTCCTCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873088 46 + 4876863 AGATTACCTGATGTCCAAAGAGGAGGGAATAGCATAAAGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761714 46 + 115148730 AGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b T 354 C 0 s macFas5.chr5 187987974 46 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=75825.000000 s hg38.chr4_KI270789v1_alt 166023 62 + 205944 AGACAAAGGTGTTGTAGATTACCTGATATCCAAATAGGAGGTGATAGCATAAAGTCCTGTGA s panTro5.chr4 192953063 62 + 194502333 AGACAAAGGTGTTGTAGATTACCTGATATCCAAATAGGAGGTGATAGCATAAGGTCCTGTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834662 62 + 195804263 AGACAAAGGTGTTGTAGATTACCTGATATCCAAATAGGAGGTGATAGCATAAGGTCCTGTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873134 62 + 4876863 AGACAAAGGTGTTGTAGATTACCTGACGTCCAAATAGAAGGTAATAGCATAAGGTCCTGGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 62 + 115148730 AGACAAAGGTGTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGA i nomLeu3.chr7b C 0 T 181 s macFas5.chr5 187987899 62 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3497.000000 s hg38.chr4_KI270789v1_alt 166085 5 + 205944 TACAG s panTro5.chr4 192953125 5 + 194502333 TACAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834724 5 + 195804263 TACAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873196 5 + 4876863 GACAA i gorGor5.CYUI01015356v1 C 0 T 2295 s nomLeu3.chr7b 112761641 5 + 115148730 GACAG i nomLeu3.chr7b T 181 C 0 s macFas5.chr5 187987961 5 + 189454096 GAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=74526.000000 s hg38.chr4_KI270789v1_alt 166090 64 + 205944 GGTGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCATAAGATCATGAAAGAGAGAGGG s panTro5.chr4 192953130 64 + 194502333 GATGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCATAAGATCATGAAAGAGAGAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834729 64 + 195804263 GATGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCATAAGATCATGAAAGAGAGAGGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870906 64 + 4876863 GGTGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATGGCGTAAGGGCATGGAAGAGAGAGGG i gorGor5.CYUI01015356v1 T 2295 C 0 s nomLeu3.chr7b 112761646 64 + 115148730 AGGGCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAGAGACGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987966 64 + 189454096 AAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGG i macFas5.chr5 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=53103.000000 s hg38.chr4_KI270789v1_alt 166154 50 + 205944 CAGTAGATTACCTGATGTCCAAAGAGGAGGTAATAGCATACGGTCCTGGA s panTro5.chr4 192953194 50 + 194502333 CAGTAGATTACGTGATGTCCAAAGAGGAGGTAATAGCATACGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834793 50 + 195804263 CAGTAGATTACGTGATGTCCAAAGAGGAGGTAATAGCATACGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870970 50 + 4876863 CACTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGTTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761710 50 + 115148730 CTGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987910 50 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 120 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=48100.000000 s hg38.chr4_KI270789v1_alt 166204 41 + 205944 AGACAAAGTTGTTGTAGATTACCTGAGTTCCAAATAGGAGT s panTro5.chr4 192953244 41 + 194502333 AGACAAAGGTGTTGTAGATTACCTGAGTTCCAAATAGGAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834843 41 + 195804263 AGACAAAGGTGTTGTAGATTACCTGAGTTCCAAATAGGAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871020 41 + 4876863 AGACAAAGGTGTTGTAGATTACCTGAGGTCCAAATAGGAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 41 + 115148730 AGACAAAGGTGTTGTAGATGACCTGATGTCCAAATAGGAGG i nomLeu3.chr7b C 0 T 421 s macFas5.chr5 187987899 41 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=35340.000000 s hg38.chr4_KI270789v1_alt 166245 26 + 205944 TAATAGCATAAGGTCCTGGAAGAGAG s panTro5.chr4 192953285 26 + 194502333 TAATAGCATAAGGTCCTGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834884 26 + 195804263 TAATAGCATAAGGTCCTGGAAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871061 26 + 4876863 TAATAGCCTAAGGTCCTGGAAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761380 26 + 115148730 TAATAGCATAAGGTCCTGGAAGAGAG i nomLeu3.chr7b T 421 C 0 s macFas5.chr5 187987940 26 + 189454096 TGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 C 0 T 56 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2000.000000 s hg38.chr4_KI270789v1_alt 166271 2 + 205944 GG s panTro5.chr4 192953311 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834910 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871087 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761406 2 + 115148730 GG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987966 56 + 189454096 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6228.000000 s hg38.chr4_KI270789v1_alt 166273 6 + 205944 CAGTAG s panTro5.chr4 192953313 6 + 194502333 CAGTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834912 6 + 195804263 CAGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871089 6 + 4876863 CAGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761408 6 + 115148730 CTGTAG i nomLeu3.chr7b C 0 T 118 s macFas5.chr5 187987910 6 + 189454096 TTGTAG i macFas5.chr5 T 56 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=49196.000000 s hg38.chr4_KI270789v1_alt 166279 41 + 205944 ATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT s panTro5.chr4 192953319 41 + 194502333 ATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834918 41 + 195804263 ATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871095 40 + 4876863 ATTACCTGATGTTCAAATAGGAGGTAATAGCATAAGGTCC- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761296 41 + 115148730 ATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCC i nomLeu3.chr7b T 118 I 485 s macFas5.chr5 187987916 41 + 189454096 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=546.000000 s hg38.chr4_KI270789v1_alt 166320 1 + 205944 T s panTro5.chr4 192953360 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834959 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871135 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987957 0 + 189454096 C e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761337 485 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3820.000000 s hg38.chr4_KI270789v1_alt 166321 4 + 205944 GGAA s panTro5.chr4 192953361 4 + 194502333 GGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834960 4 + 195804263 GGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871136 4 + 4876863 GGAA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987957 4 + 189454096 GGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761337 485 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=17087.000000 s hg38.chr4_KI270789v1_alt 166325 13 + 205944 GAGAGAGGGTTGT s panTro5.chr4 192953365 13 + 194502333 GAGAGAGGGTTGT i panTro5.chr4 C 0 I 420 s panPan2.chr4 192834964 13 + 195804263 GAGAGAGGGTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871140 13 + 4876863 GAGAGATGGTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761822 13 + 115148730 GAGAGAGGGTTGT i nomLeu3.chr7b I 485 C 0 s macFas5.chr5 187987961 13 + 189454096 GAGAGAAGGTTGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=47303.000000 s hg38.chr4_KI270789v1_alt 166338 46 + 205944 AGATTACATGATGTCTAAATAGGGGGTAATAGCATAACATCCTGGA s panTro5.chr4 192953798 46 + 194502333 AGATTACATGATGTCCAAATAGGATGTAATAGCATAAGGTCCTGGA i panTro5.chr4 I 420 C 0 s panPan2.chr4 192834977 46 + 195804263 AGATTACCCGATGTCCAGATAGGAGGTAATAGCATAAAGTCCTGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871153 46 + 4876863 ACATTACATAATTTCTAAATAGGGGGTAATAGCATAACGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761835 46 + 115148730 AGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987974 46 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3930.000000 s hg38.chr4_KI270789v1_alt 166384 4 + 205944 AGAC s panTro5.chr4 192953844 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835023 4 + 195804263 AGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871199 4 + 4876863 AGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761881 4 + 115148730 AGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=13195.000000 s hg38.chr4_KI270789v1_alt 166388 6 + 205944 AAAGGT s panTro5.chr4 192953848 6 + 194502333 AAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835027 5 + 195804263 AGA-GC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871203 6 + 4876863 AAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761885 6 + 115148730 AAAAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 6 + 190429646 AAAGGT i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 6 + 189454096 AAAGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 6 - 25927173 AAAGGT i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365724 6 + 135778131 AAAGGT i chlSab2.chr7 T 128 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=202536.000000 s hg38.chr4_KI270789v1_alt 166394 59 + 205944 GTTGCAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAAAGAG s panTro5.chr4 192953854 57 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAAAAGAATAAGGTCCTGGAAGA--GAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835032 59 + 195804263 GTTGCGGATTACCTGATGTCCAAATAGGACAAAATAGCATAAGGTCCTGGAAGAAAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871209 59 + 4876863 GTTGCGGATTACCTGATGTCCAAATAGGAGGATATAGCATAAGGTCCTGGAAGAAAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761891 59 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGTGGTAATAGCATAAGGTCCGCGAAGAGAAAG i nomLeu3.chr7b C 0 T 302 s rheMac8.chr5 189045022 59 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 59 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 59 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 59 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 59 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 T 114 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4500.000000 s hg38.chr4_KI270789v1_alt 166453 1 + 205944 G s panTro5.chr4 192953911 1 + 194502333 G i panTro5.chr4 C 0 I 360 s panPan2.chr4 192835091 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871268 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761648 1 + 115148730 G i nomLeu3.chr7b T 302 C 0 s rheMac8.chr5 189045081 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987968 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379294 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365789 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929854 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=13848.000000 s hg38.chr4_KI270789v1_alt 166454 5 + 205944 GTAGG s panTro5.chr4 192954272 5 + 194502333 GTTGT i panTro5.chr4 I 360 T 899 s panPan2.chr4 192835092 5 + 195804263 GTAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871269 5 + 4876863 GTAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761649 5 + 115148730 GCTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 5 + 190429646 GTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 5 + 189454096 GTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 5 - 25927173 GTTGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 5 + 135778131 GTTGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929855 5 + 2368649 GTTGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=164562.000000 s hg38.chr4_KI270789v1_alt 166459 46 + 205944 AGATTACCGGATGTCCAAATAGGAAGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192953378 46 + 194502333 AGATTACCCGATGTCCAGATAGGAGGTAATAGCATAAAGTCCTGCA i panTro5.chr4 T 899 C 0 s panPan2.chr4 192835097 46 + 195804263 AGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871274 46 + 4876863 AGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761654 46 + 115148730 AGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045087 46 + 190429646 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987974 46 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379300 46 - 25927173 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365795 46 + 135778131 AGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929860 46 + 2368649 AGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 T 74 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=9104.000000 s hg38.chr4_KI270789v1_alt 166505 3 + 205944 AGA s panTro5.chr4 192953424 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835143 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871320 3 + 4876863 AAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761700 3 + 115148730 AGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045133 3 + 190429646 AGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988020 3 + 189454096 AGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379346 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365841 3 + 135778131 AGA i chlSab2.chr7 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6004.000000 s hg38.chr4_KI270789v1_alt 166508 4 + 205944 GAAA s panTro5.chr4 192953427 4 + 194502333 GAGA i panTro5.chr4 C 0 I 899 s panPan2.chr4 192835146 4 + 195804263 CAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871323 4 + 4876863 CAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761703 4 + 115148730 GAGA i nomLeu3.chr7b C 0 I 1 s rheMac8.chr5 189045136 4 + 190429646 GAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988023 4 + 189454096 GAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379349 4 - 25927173 GAGA i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=5600.000000 s hg38.chr4_KI270789v1_alt 166512 2 + 205944 GG s panTro5.chr4 192954330 2 + 194502333 GG i panTro5.chr4 I 899 C 0 s panPan2.chr4 192835150 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871327 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761708 2 + 115148730 GG i nomLeu3.chr7b I 1 C 0 s rheMac8.chr5 189045140 2 + 190429646 GG i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988027 2 + 189454096 GG i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379353 2 - 25927173 GG i macNem1.NW_012013133v1 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-1745.000000 s hg38.chr4_KI270789v1_alt 166514 2 + 205944 TC s panTro5.chr4 192954332 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835152 2 + 195804263 TC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871329 2 + 4876863 TC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761710 1 + 115148730 C- i nomLeu3.chr7b C 0 T 242 s macFas5.chr5 187987908 2 + 189454096 TG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5595.000000 s hg38.chr4_KI270789v1_alt 166516 4 + 205944 TTGT s panTro5.chr4 192954334 4 + 194502333 TTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835154 4 + 195804263 TTGT i panPan2.chr4 C 0 I 3535 s gorGor5.CYUI01015356v1 3871331 4 + 4876863 TTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761469 4 + 115148730 TTGT i nomLeu3.chr7b T 242 C 0 s macFas5.chr5 187987910 4 + 189454096 TTGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=10358.000000 s hg38.chr4_KI270789v1_alt 166520 8 + 205944 AGACTACC s panTro5.chr4 192954338 8 + 194502333 AGATTACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838693 8 + 195804263 AGATTACC i panPan2.chr4 I 3535 C 0 s gorGor5.CYUI01015356v1 3871335 8 + 4876863 AGACTACC i gorGor5.CYUI01015356v1 C 0 I 2424 s nomLeu3.chr7b 112761473 8 + 115148730 AGATTACC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987914 8 + 189454096 AGATTACC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7095.000000 s hg38.chr4_KI270789v1_alt 166528 5 + 205944 TGATG s panTro5.chr4 192954346 5 + 194502333 TGATG i panTro5.chr4 C 0 I 123 s panPan2.chr4 192838701 5 + 195804263 TGATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873767 5 + 4876863 TGATG i gorGor5.CYUI01015356v1 I 2424 C 0 s nomLeu3.chr7b 112761481 5 + 115148730 TGATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987922 5 + 189454096 TGATG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=100922.000000 s hg38.chr4_KI270789v1_alt 166533 96 + 205944 TCCAATTAGGAGGTAATCGCATAAGGTTCTGGAACAGATAGG-GTTGTATACTACCTGATGTCCAAATAGGAAGTAAGAGCATAAGGTCCGGGAAGA s panTro5.chr4 192954474 97 + 194502333 TCCAAATAGGAGGTAATAGCATAAGGTCCTCGAAGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGA i panTro5.chr4 I 123 C 0 s panPan2.chr4 192838706 96 + 195804263 TCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAGAGAGG-GCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873772 94 + 4876863 TCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAGAG--AGG-GCTGTAGCTTACCTGGTGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761486 96 + 115148730 TCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGG-GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b C 0 I 188 s macFas5.chr5 187987927 96 + 189454096 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG-GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1910.000000 s hg38.chr4_KI270789v1_alt 166629 2 + 205944 GA s panTro5.chr4 192954571 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838802 2 + 195804263 GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873866 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 T 3361 s macFas5.chr5 187988023 2 + 189454096 GA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e nomLeu3.chr7b 112761582 188 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=807.000000 s hg38.chr4_KI270789v1_alt 166631 2 + 205944 GG s panTro5.chr4 192954573 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838804 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s macFas5.chr5 187988025 2 + 189454096 GA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379355 120 - 25927173 T e rheMac8.chr5 189045142 120 + 190429646 T e nomLeu3.chr7b 112761582 188 + 115148730 I e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 166633 1 + 205944 G s panTro5.chr4 192954575 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838806 1 + 195804263 G i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761770 1 + 115148730 G i nomLeu3.chr7b I 188 C 0 s rheMac8.chr5 189045022 1 + 190429646 G i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187988027 1 + 189454096 G i macFas5.chr5 C 0 T 118 s macNem1.NW_012013133v1 24379235 1 - 25927173 G i macNem1.NW_012013133v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=21808.000000 s hg38.chr4_KI270789v1_alt 166634 13 + 205944 TTGTAGATTACCC s panTro5.chr4 192954576 13 + 194502333 TTGTAGATTACCC i panTro5.chr4 C 0 I 120 s panPan2.chr4 192838807 13 + 195804263 TTGTAGATTACGT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761771 13 + 115148730 TTGTAGATGACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045023 13 + 190429646 TTGTAGATTACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987910 13 + 189454096 TTGTAGATTACCT i macFas5.chr5 T 118 C 0 s macNem1.NW_012013133v1 24379236 13 - 25927173 TTGTAGATTACCT i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=18596.000000 s hg38.chr4_KI270789v1_alt 166647 12 + 205944 GATGTCCAAGTA s panTro5.chr4 192954709 12 + 194502333 GATGTCCAACTA i panTro5.chr4 I 120 C 0 s panPan2.chr4 192838820 12 + 195804263 GATGTCCAATTA i panPan2.chr4 C 0 T 3532 s nomLeu3.chr7b 112761784 12 + 115148730 GATGTCCAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045036 12 + 190429646 GATGTCCACGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987923 12 + 189454096 GATGTCCACGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379249 12 - 25927173 GATGTCCACGTA i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=15336.000000 s hg38.chr4_KI270789v1_alt 166659 11 + 205944 GGCGGTGATCA s panTro5.chr4 192954721 11 + 194502333 GGAGGTAATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835300 11 + 195804263 GGTGGTAATTG i panPan2.chr4 T 3532 C 0 s nomLeu3.chr7b 112761796 11 + 115148730 GGAGGTAATAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045048 11 + 190429646 GGAGGTGATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987935 11 + 189454096 GGAGGTGATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379261 11 - 25927173 GGAGGTGATAG i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929906 74 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=38017.000000 s hg38.chr4_KI270789v1_alt 166670 16 + 205944 CATAAGGTCCTGGAAG s panTro5.chr4 192954732 16 + 194502333 CATAAGGTCCTGGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835311 16 + 195804263 CATAAGGTCCTGGAAG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761807 16 + 115148730 CATAAAGTCCTTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045059 16 + 190429646 CATAAGGTCCTGGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987946 16 + 189454096 CATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379272 16 - 25927173 CATAAGGTCCTGGAAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929832 16 + 2368649 CATAAGGTCCTGGAAG i colAng1.NW_012116221v1 T 74 T 179 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=10071.000000 s hg38.chr4_KI270789v1_alt 166686 8 + 205944 AGAAAGGC s panTro5.chr4 192954748 8 + 194502333 AGAAATGT i panTro5.chr4 C 0 I 1 s panPan2.chr4 192835327 8 + 195804263 AGAGAGGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761823 8 + 115148730 AGAGAGGG i nomLeu3.chr7b C 0 T 423 s rheMac8.chr5 189045075 8 + 190429646 AGAGAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987962 8 + 189454096 AGAGAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379288 8 - 25927173 AGAGAAGG i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=14072.000000 s hg38.chr4_KI270789v1_alt 166694 9 + 205944 TTGCAGATG s panTro5.chr4 192954757 9 + 194502333 TTGTAGATT i panTro5.chr4 I 1 C 0 s panPan2.chr4 192835335 9 + 195804263 TTGTAGATG i panPan2.chr4 C 0 I 2564 s nomLeu3.chr7b 112761408 9 + 115148730 CTGTAGATT i nomLeu3.chr7b T 423 C 0 s rheMac8.chr5 189045083 9 + 190429646 TTGTAGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987970 9 + 189454096 TTGTAGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379296 9 - 25927173 TTGTAGATT i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=27108.000000 s hg38.chr4_KI270789v1_alt 166703 16 + 205944 ACCTGATGTCCAAATG s panTro5.chr4 192954766 16 + 194502333 ACCTGATGTCCAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837908 16 + 195804263 ACCTGATGTCCAAATA i panPan2.chr4 I 2564 I 908 s nomLeu3.chr7b 112761417 16 + 115148730 ACCTGATGTCCAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045092 16 + 190429646 ACCTGATGTCCACGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987979 16 + 189454096 ACCTGATGTCCACGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379305 16 - 25927173 ACCTGATGTCCACGTA i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873868 3361 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52923.000000 s hg38.chr4_KI270789v1_alt 166719 22 + 205944 GGAGGTAATAGCATAAGGTCCT s panTro5.chr4 192954782 22 + 194502333 GGAGGAAATAGCATAAGGTCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838832 22 + 195804263 GGAGGTAATAGCATAAGGTCCT i panPan2.chr4 I 908 C 0 s gorGor5.CYUI01015356v1 3870507 22 + 4876863 GGAGGTAATAGCATAAGGTCCT i gorGor5.CYUI01015356v1 T 3361 C 0 s nomLeu3.chr7b 112761433 22 + 115148730 GGAGGTAACAGCATAAGGTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045108 22 + 190429646 GGAGGTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187987995 22 + 189454096 GGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379321 22 - 25927173 GGAGGTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 T 114 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=3348.000000 s hg38.chr4_KI270789v1_alt 166741 5 + 205944 CGAAA s panTro5.chr4 192954804 5 + 194502333 GGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838854 5 + 195804263 CGACG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870529 5 + 4876863 GGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761455 5 + 115148730 GGAAG i nomLeu3.chr7b C 0 T 294 s macFas5.chr5 187988017 5 + 189454096 GGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5815.000000 s hg38.chr4_KI270789v1_alt 166746 7 + 205944 ACAAAGG s panTro5.chr4 192954809 7 + 194502333 ACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838859 7 + 195804263 ACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870534 7 + 4876863 ACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761166 7 + 115148730 AGAAGGC i nomLeu3.chr7b T 294 C 0 s macFas5.chr5 187988022 7 + 189454096 AGAGAGG i macFas5.chr5 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 166753 1 + 205944 T s panTro5.chr4 192954816 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838866 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870541 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 I 2112 s nomLeu3.chr7b 112761173 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187988029 60 + 189454096 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 166754 2 + 205944 GT s panTro5.chr4 192954817 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838867 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872654 2 + 4876863 GT i gorGor5.CYUI01015356v1 I 2112 C 0 s nomLeu3.chr7b 112761174 2 + 115148730 GT i nomLeu3.chr7b C 0 I 236 s macFas5.chr5 187987969 2 + 189454096 GT i macFas5.chr5 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2000.000000 s hg38.chr4_KI270789v1_alt 166756 3 + 205944 TGG s panTro5.chr4 192954819 3 + 194502333 TGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838869 3 + 195804263 TGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872656 3 + 4876863 TGT i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987971 3 + 189454096 TGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112761176 236 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=56203.000000 s hg38.chr4_KI270789v1_alt 166759 46 + 205944 AGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA s panTro5.chr4 192954822 46 + 194502333 AGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCATGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838872 46 + 195804263 AGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872659 46 + 4876863 AGATTACCTGATGTTCAAATAGGAGGTAATACGGTAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761412 46 + 115148730 AGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTGGA i nomLeu3.chr7b I 236 C 0 s macFas5.chr5 187987974 46 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9545.000000 s hg38.chr4_KI270789v1_alt 166805 8 + 205944 AGACAAAG s panTro5.chr4 192954868 8 + 194502333 AAACAAAG i panTro5.chr4 C 0 T 1445 s panPan2.chr4 192838918 8 + 195804263 AGACAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872705 8 + 4876863 AGACAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 8 + 115148730 AGACAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 8 + 189454096 AGAGAAAG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=10415.000000 s hg38.chr4_KI270789v1_alt 166813 9 + 205944 GTGTTGTAC s panTro5.chr4 192953431 9 + 194502333 GCGTTGTAC i panTro5.chr4 T 1445 C 0 s panPan2.chr4 192838926 9 + 195804263 GTGTTGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872713 9 + 4876863 GTGTTGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761466 9 + 115148730 GTGTTGTAG i nomLeu3.chr7b C 0 T 61 s macFas5.chr5 187987907 9 + 189454096 GTGTTGTAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=45348.000000 s hg38.chr4_KI270789v1_alt 166822 44 + 205944 ATTACCTGATG-----------------------------------------------------------TCCAAATAGAAGGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192953440 44 + 194502333 ATTATCTGATA-----------------------------------------------------------TCCAAATAGGAGGTAATAGCATAAGGTCCTGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838935 103 + 195804263 ATTACCTGATGTCCAAATAGGAGGTCATAGATAAGGTGCTGGAAGAGAGACGGCTGTAGATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872722 44 + 4876863 ATTACCTGATG-----------------------------------------------------------TCCAAATAGAAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761414 44 + 115148730 ATTACCTGATG-----------------------------------------------------------TCCAAATAGGAGGTAACAGCATAAGGTCCTGGA i nomLeu3.chr7b T 61 C 0 s macFas5.chr5 187987916 44 + 189454096 ATTACCTGATG-----------------------------------------------------------TCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52485.000000 s hg38.chr4_KI270789v1_alt 166866 48 + 205944 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGC s panTro5.chr4 192953484 48 + 194502333 AGACAAAGGTGTTGTAGATTAACTGATGTCCAAATAGGAGGAAATAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839038 45 + 195804263 AGAGA---GGGTTGTAGATTACGTGATGTCCAAATAGGAGGTAATAGC i panPan2.chr4 C 0 I 1727 s gorGor5.CYUI01015356v1 3872766 48 + 4876863 ATACGAAGGTGTTGTAGTTTACCTGATGTCCAAATAGGAGGTAATAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 48 + 115148730 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 48 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGC i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=22418.000000 s hg38.chr4_KI270789v1_alt 166914 22 + 205944 ATAAGGTCCTGGAAGACAAAGG s panTro5.chr4 192953532 22 + 194502333 ATAAGGTCATGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840810 22 + 195804263 ATAAGCTCCGGGAAGATACAGG i panPan2.chr4 I 1727 C 0 s gorGor5.CYUI01015356v1 3872814 22 + 4876863 ATAAGGTCCTGGAATACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761506 22 + 115148730 ATAAGGTCCTGGAAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987947 22 + 189454096 ATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=51699.000000 s hg38.chr4_KI270789v1_alt 166936 52 + 205944 T----GTTGTAGATTACCTGATGTCTAAATAGGAGGTAATAGCATAAGGTCCTGGG s panTro5.chr4 192953554 51 + 194502333 -----GCAGTAGATACCCTGATGTCAAAATAGCAGGTAATAGCATACTGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840832 52 + 195804263 T----GTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872836 56 + 4876863 TCAACGTTGTAGTTTACCTGATGTTCAAATAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761528 51 + 115148730 -----GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 T----GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2860.000000 s hg38.chr4_KI270789v1_alt 166988 4 + 205944 AGAC s panTro5.chr4 192953605 4 + 194502333 AGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840884 4 + 195804263 AGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872892 4 + 4876863 ATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761579 4 + 115148730 AGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929848 179 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=70763.000000 s hg38.chr4_KI270789v1_alt 166992 20 + 205944 AAAGGTGTTGTAGATTACCT s panTro5.chr4 192953609 17 + 194502333 A---GGGCTGTAGATTACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840888 20 + 195804263 AGAGATGTTGTAGATTACCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872896 20 + 4876863 AAAGGTGTTGTAGTTTACCT i gorGor5.CYUI01015356v1 C 0 T 2114 s nomLeu3.chr7b 112761583 20 + 115148730 AAAGGTGTTGTAGATTACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 20 + 190429646 AAAGGTGTTGTAGATTACCT i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187987903 20 + 189454096 AAAGGTGTTGTAGATTACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 20 - 25927173 AAAGGTGTTGTAGATTACCT i macNem1.NW_012013133v1 T 114 C 0 s chlSab2.chr7 134365724 20 + 135778131 AAAGGTGTTGTAGATTACCT i chlSab2.chr7 T 120 C 0 s colAng1.NW_012116221v1 929669 20 + 2368649 AAAGGTGTTGTAGATTACCT i colAng1.NW_012116221v1 T 179 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=55860.000000 s hg38.chr4_KI270789v1_alt 167012 15 + 205944 GATGTCCAAATAGGA s panTro5.chr4 192953626 15 + 194502333 GATGTCCAAATAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840908 15 + 195804263 GATGTCCAAATAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870802 15 + 4876863 GATGTCCAAATAGGA i gorGor5.CYUI01015356v1 T 2114 C 0 s nomLeu3.chr7b 112761603 15 + 115148730 GATGTCCAAATAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045036 15 + 190429646 GATGTCCACGTAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987923 15 + 189454096 GATGTCCACGTAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379249 15 - 25927173 GATGTCCACGTAGGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365744 15 + 135778131 GATGTCCACGTAGGA i chlSab2.chr7 C 0 T 29 s colAng1.NW_012116221v1 929689 15 + 2368649 GATGTCCACGTAGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=74638.000000 s hg38.chr4_KI270789v1_alt 167027 28 + 205944 GGAAATAGCATAAGGTCATGGAAGAGAG s panTro5.chr4 192953641 28 + 194502333 GGTAATAGCATAAGGTCATGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840923 28 + 195804263 GCTAATAGCATAAGGTCCTGGAAGAGAG i panPan2.chr4 C 0 T 2813 s gorGor5.CYUI01015356v1 3870817 28 + 4876863 GGAAATGGCGTAAGGGCATGGAAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761618 28 + 115148730 CGTAATAGCATGAGGTCCTGGAAGACAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045051 28 + 190429646 GGTGATAGCATAAGGTCCTGGAAGAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987938 28 + 189454096 GGTGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379264 28 - 25927173 GGTGATAGCATAAGGTCCTGGAAGAGAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929704 28 + 2368649 GCTGATAGCGTAAGGTCCTGGAAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=72665.000000 s hg38.chr4_KI270789v1_alt 167055 27 + 205944 AGGGCAGTAGATTACCTGATGTCCAAA s panTro5.chr4 192953669 27 + 194502333 AGGGCTGTAGATTACCTGATGTCCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838138 27 + 195804263 AGGGTTGTCGATTACCTGATGTCCAAA i panPan2.chr4 T 2813 C 0 s gorGor5.CYUI01015356v1 3870845 27 + 4876863 AGGGCACTAGATTACCTGATGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761646 27 + 115148730 AGGGCTGTAGATTACATGATGTCCAAA i nomLeu3.chr7b C 0 T 60 s rheMac8.chr5 189045079 27 + 190429646 AAGGTTGTAGATTACCTGATGTCCACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987966 27 + 189454096 AAGGTTGTAGATTACCTGATGTCCACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379292 27 - 25927173 AAGGTTGTAGATTACCTGATGTCCACG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929732 27 + 2368649 AGGGTTGTAGATTACCTGATGTCCACG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=5576.000000 s hg38.chr4_KI270789v1_alt 167082 2 + 205944 TA s panTro5.chr4 192953696 2 + 194502333 TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838165 2 + 195804263 TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870872 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 I 2964 s nomLeu3.chr7b 112761613 2 + 115148730 TA i nomLeu3.chr7b T 60 C 0 s rheMac8.chr5 189045106 2 + 190429646 TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987993 2 + 189454096 TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379319 2 - 25927173 TA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929759 2 + 2368649 TA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=41894.000000 s hg38.chr4_KI270789v1_alt 167084 18 + 205944 GTACGTAATATCATAAGG s panTro5.chr4 192953698 18 + 194502333 GTAGATAATATCATAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838167 18 + 195804263 GGAGGTAATACCGTAAGG i panPan2.chr4 C 0 I 306 s gorGor5.CYUI01015356v1 3873838 18 + 4876863 GGAGGTAATATCATAAGG i gorGor5.CYUI01015356v1 I 2964 C 0 s nomLeu3.chr7b 112761615 18 + 115148730 GGACGTAATAGCATGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045108 18 + 190429646 GGAGGTGATAGCATAAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987995 18 + 189454096 GGAGGTGATAGCATAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379321 18 - 25927173 GGAGGTGATAGCATAAGG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929761 18 + 2368649 GGAGCTGATAGCATAAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=51584.000000 s hg38.chr4_KI270789v1_alt 167102 17 + 205944 TGCTGGAAGAGAGAGGG s panTro5.chr4 192953716 17 + 194502333 TGCTGGAAGAGAGAGGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838491 17 + 195804263 TGCTGGAAGAGAGAGGG i panPan2.chr4 I 306 C 0 s gorGor5.CYUI01015356v1 3873856 17 + 4876863 TGCTGGAAAAGAGAGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761633 17 + 115148730 TCCTGGAAGACAGAGGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045126 17 + 190429646 TCCTGGAAGAGAGAGGG i rheMac8.chr5 C 0 T 94 s macFas5.chr5 187988013 17 + 189454096 TCCTGGAAGAGAGAGGG i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379339 17 - 25927173 TCCTGGAAGAGAGAGGG i macNem1.NW_012013133v1 C 0 T 94 s colAng1.NW_012116221v1 929779 17 + 2368649 TCCTGGAAGAGAGAGGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=20304.000000 s hg38.chr4_KI270789v1_alt 167119 13 + 205944 CTTTAGATTACCC s panTro5.chr4 192953733 13 + 194502333 CTTTAGATTACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838508 13 + 195804263 CTGTAGATTACCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873873 13 + 4876863 CTGTAGATTACCT i gorGor5.CYUI01015356v1 C 0 T 970 s nomLeu3.chr7b 112761650 13 + 115148730 CTGTAGATTACAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987970 13 + 189454096 TTGTAGATTACCT i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929796 13 + 2368649 TTGTAGATTACCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=44901.000000 s hg38.chr4_KI270789v1_alt 167132 29 + 205944 GATGTCCAAATAGGAGGTAGTAGCATAAG s panTro5.chr4 192953746 29 + 194502333 GATGTCCAAATAGGAGGAAATAGCATAAG i panTro5.chr4 C 0 I 1569 s panPan2.chr4 192838521 28 + 195804263 GATGTCCAAA-AGGAGGTAATACCATAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872916 29 + 4876863 GATGTCCAAATAAGAGGTAATAGCATAAG i gorGor5.CYUI01015356v1 T 970 C 0 s nomLeu3.chr7b 112761663 29 + 115148730 GATGTCCAAATAGGAGGAAATAGCATAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987983 29 + 189454096 GATGTCCACGTAGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929809 29 + 2368649 GATGTCCACGTAGGAGGTGATAGCATAAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=31644.000000 s hg38.chr4_KI270789v1_alt 167161 19 + 205944 GTCCT-GGAAGAGAGAGGGT s panTro5.chr4 192955344 20 + 194502333 GTCCTTGGAAGAGAGAGGGT i panTro5.chr4 I 1569 C 0 s panPan2.chr4 192838549 19 + 195804263 GTCCT-GGAAGAGAGAGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872945 19 + 4876863 GTCCT-GCAGGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761692 19 + 115148730 GTCCT-GGAAGAGAGACGGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988012 19 + 189454096 GTCCT-GGAAGAGAGAGGGT i macFas5.chr5 C 0 T 60 s colAng1.NW_012116221v1 929838 19 + 2368649 GTCCT-GGAAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=26256.000000 s hg38.chr4_KI270789v1_alt 167180 15 + 205944 TGTAGATTACATGAT s panTro5.chr4 192955364 15 + 194502333 TGTAGATTACATGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838568 15 + 195804263 TGTGGATTACCTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872964 15 + 4876863 TGTAGATTACATGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761711 15 + 115148730 TGTAGATTACATGAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 15 + 189454096 TGTAGATTACCTGAT i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929857 15 + 2368649 TGTAGATTACCTGAT i colAng1.NW_012116221v1 C 0 T 196 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11679.000000 s hg38.chr4_KI270789v1_alt 167195 26 + 205944 TTCGAAAT-------------------------------------------------------------AGGGGGTAATAACATAAC s panTro5.chr4 192955379 26 + 194502333 TTCTAAAT-------------------------------------------------------------AGGGGGTAATAGCATAAC i panTro5.chr4 C 0 T 1630 s panPan2.chr4 192838583 87 + 195804263 GTCCAAATATTCGGCAATAGCGTAAGGTCCTGGAATACAAAGGTGTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATAGCATAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872979 26 + 4876863 TTCTAAAT-------------------------------------------------------------AGGGGGTAATAGCCTAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761726 26 + 115148730 ATCCAAAT-------------------------------------------------------------TGCAGATAATAGCATAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987986 26 + 189454096 GTCCACGT-------------------------------------------------------------AGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=443.000000 s hg38.chr4_KI270789v1_alt 167221 1 + 205944 A s panTro5.chr4 192953775 1 + 194502333 A i panTro5.chr4 T 1630 C 0 s panPan2.chr4 192838670 1 + 195804263 G i panPan2.chr4 C 0 T 465 s gorGor5.CYUI01015356v1 3873005 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761752 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988012 1 + 189454096 G i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4818.000000 s hg38.chr4_KI270789v1_alt 167222 7 + 205944 TCCCGGA s panTro5.chr4 192953776 7 + 194502333 TCCTGGA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873006 7 + 4876863 TCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761753 7 + 115148730 TCCTCAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988013 7 + 189454096 TCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e panPan2.chr4 192838671 465 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11036.000000 s hg38.chr4_KI270789v1_alt 167229 14 + 205944 AGACAAAGGTTTTG s panTro5.chr4 192953783 14 + 194502333 GGACAAAGGTGTTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873013 14 + 4876863 AGACAAAGGTGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 14 + 115148730 AGACAAAGGTGTTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 14 + 189454096 AGAGAAAGGTGTTG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e panPan2.chr4 192838671 465 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8977.000000 s hg38.chr4_KI270789v1_alt 167243 9 + 205944 CAGATTACA s panTro5.chr4 192953797 9 + 194502333 TAGATTACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838206 9 + 195804263 TAGATTACC i panPan2.chr4 T 465 C 0 s gorGor5.CYUI01015356v1 3873027 9 + 4876863 CAGATTACC i gorGor5.CYUI01015356v1 C 0 T 1693 s nomLeu3.chr7b 112761774 9 + 115148730 TAGATGACC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987913 9 + 189454096 TAGATTACC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=48473.000000 s hg38.chr4_KI270789v1_alt 167252 47 + 205944 TGATGTCCAAATAGGAGGAAATAGCGTAAGGTCCTGGAAGAAAGAGG s panTro5.chr4 192953806 47 + 194502333 TGATGTCCAAATAGGATGTAATAGCATAAGGTCCTGGAAGACAAAGG i panTro5.chr4 C 0 I 1630 s panPan2.chr4 192838215 47 + 195804263 TGATGTCCAAATAGGAGGTAATAGCATAAGATCCTCAAAGACCAAGT i panPan2.chr4 C 0 I 486 s gorGor5.CYUI01015356v1 3871343 47 + 4876863 TGATGTCCAAATAGGAGGTAATAGAATAAGGTTGTGGAAGACAAAGG i gorGor5.CYUI01015356v1 T 1693 I 8 s nomLeu3.chr7b 112761783 47 + 115148730 TGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987922 47 + 189454096 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=35908.000000 s hg38.chr4_KI270789v1_alt 167299 51 + 205944 GTAGTAGAATACCGGATGTCCAAATGGGAGGTAATACCATAAGTTCCTGGA s panTro5.chr4 192955483 51 + 194502333 GTAGTAGATTACCGGATGTCCAAATAGGAAGTAATAGCATAAGGTCCTGGA i panTro5.chr4 I 1630 C 0 s panPan2.chr4 192838748 51 + 195804263 GCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCCTGGA i panPan2.chr4 I 486 T 3641 s nomLeu3.chr7b 112761830 51 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e gorGor5.CYUI01015356v1 3871390 8 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2871.000000 s hg38.chr4_KI270789v1_alt 167350 8 + 205944 AGACAAAG s panTro5.chr4 192955534 8 + 194502333 AGAGAAAG i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761881 8 + 115148730 AGACAAAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988020 8 + 189454096 AGAGAGAG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e gorGor5.CYUI01015356v1 3871390 8 + 4876863 I e panPan2.chr4 192838799 3641 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=204.000000 s hg38.chr4_KI270789v1_alt 167358 3 + 205944 TTC s panTro5.chr4 192955542 3 + 194502333 GTC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761889 3 + 115148730 GTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987907 3 + 189454096 GTG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929872 196 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e gorGor5.CYUI01015356v1 3871390 8 + 4876863 I e panPan2.chr4 192838799 3641 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3242.000000 s hg38.chr4_KI270789v1_alt 167361 4 + 205944 TTGC s panTro5.chr4 192955545 4 + 194502333 TTGT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761892 4 + 115148730 TTGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987910 4 + 189454096 TTGT i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929676 4 + 2368649 TTGT i colAng1.NW_012116221v1 T 196 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e gorGor5.CYUI01015356v1 3871390 8 + 4876863 I e panPan2.chr4 192838799 3641 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 167365 2 + 205944 AG s panTro5.chr4 192955549 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835158 2 + 195804263 AG i panPan2.chr4 T 3641 C 0 s nomLeu3.chr7b 112761896 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987914 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929680 2 + 2368649 AG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e gorGor5.CYUI01015356v1 3871390 8 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=78232.000000 s hg38.chr4_KI270789v1_alt 167367 52 + 205944 ACTACCTGATGTCC-AAATAGGATGTAATCGCATAAGGTTCTGGAACAGAGAG s panTro5.chr4 192955551 52 + 194502333 ACTACCTGATGTCC-AAATAGGAGGTAATCGCATAAGGTTCTGGAACAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835160 53 + 195804263 ACTACCTGATGTCCAAAATAGGATGTAATCGCATAAGGTTCTGGAACAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871398 52 + 4876863 ACTACCTGATGTCC-AAATAGGATGTAATCGCATAAGGTTCTGGAACAGAGAG i gorGor5.CYUI01015356v1 I 8 C 0 s nomLeu3.chr7b 112761898 52 + 115148730 ATTACCTGATGTCC-AAATAGGTGGTAATAGCATAAGGTCCGCGAAGAGAAAG i nomLeu3.chr7b C 0 T 302 s macFas5.chr5 187987916 52 + 189454096 ATTACCTGATGTCC-ACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929682 52 + 2368649 ATTACCTGATGTCC-ACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 167419 1 + 205944 G s panTro5.chr4 192955603 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835213 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871450 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761648 1 + 115148730 G i nomLeu3.chr7b T 302 C 0 s macFas5.chr5 187987968 1 + 189454096 G i macFas5.chr5 C 0 T 60 s colAng1.NW_012116221v1 929734 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5190.000000 s hg38.chr4_KI270789v1_alt 167420 3 + 205944 GTT s panTro5.chr4 192955604 3 + 194502333 GTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835214 3 + 195804263 GTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871451 3 + 4876863 GTT i gorGor5.CYUI01015356v1 C 0 I 844 s nomLeu3.chr7b 112761649 3 + 115148730 GCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 3 + 189454096 GTT i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929735 3 + 2368649 GTT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=34872.000000 s hg38.chr4_KI270789v1_alt 167423 24 + 205944 GTGTATTACCTCATGTCCAAATCA s panTro5.chr4 192955607 24 + 194502333 GTATACTACCTGATGTCCAAATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835217 24 + 195804263 GCATATTACCTGATGTCCAAATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872298 24 + 4876863 GTAGATTACCTGATGTCCAAATAG i gorGor5.CYUI01015356v1 I 844 C 0 s nomLeu3.chr7b 112761652 24 + 115148730 GTAGATTACATGATGTCCAAATAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987912 24 + 189454096 GTAGATTACCTGATGTCCACGTAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929738 24 + 2368649 GTAGATTACCTGATGTCCACGTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379356 94 - 25927173 T e rheMac8.chr5 189045143 94 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61414.000000 s hg38.chr4_KI270789v1_alt 167447 24 + 205944 GAGGTAAGAGCATAAGGTCCGTGA s panTro5.chr4 192955631 24 + 194502333 GAAGTAAGAGCATAAGGTCCGGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835241 24 + 195804263 CAGGTAAGAGCATAAGGTCCGGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872322 24 + 4876863 CAGGTAATAGCATACGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 I 677 s nomLeu3.chr7b 112761676 24 + 115148730 GAGGAAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045049 24 + 190429646 GAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 T 94 C 0 s macFas5.chr5 187987936 24 + 189454096 GAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379262 24 - 25927173 GAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 T 94 C 0 s colAng1.NW_012116221v1 929762 24 + 2368649 GAGCTGATAGCATAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=21051.000000 s hg38.chr4_KI270789v1_alt 167471 9 + 205944 AGAGAGAGG s panTro5.chr4 192955655 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835265 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761700 9 + 115148730 AGAGAGACG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045073 9 + 190429646 AGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987960 9 + 189454096 AGAGAGAAG i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379286 9 - 25927173 AGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929786 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365759 29 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3872346 677 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=123054.000000 s hg38.chr4_KI270789v1_alt 167480 37 + 205944 GTTGTAGATTACCTGATGTCCACGTAGGCGGTAATCC s panTro5.chr4 192955664 37 + 194502333 GTTGTAGATTACCCGATGTCCAAGTAGGCGGTAATCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835274 37 + 195804263 GTTGTAGATTACCTGATGTCCAAGTAGGTGGTAATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873023 37 + 4876863 GTTGCAGATTACCTGATGTCCAAATAGGAGGAAATAG i gorGor5.CYUI01015356v1 I 677 C 0 s nomLeu3.chr7b 112761709 37 + 115148730 GCTGTAGATTACATGATATCCAAATTGCAGATAATAG i nomLeu3.chr7b C 0 T 241 s rheMac8.chr5 189045082 37 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 37 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379295 37 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 37 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i chlSab2.chr7 T 29 C 0 s colAng1.NW_012116221v1 929795 37 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=99234.000000 s hg38.chr4_KI270789v1_alt 167517 25 + 205944 CATAAGGTCCTGGAAGAGAGAGGGT s panTro5.chr4 192955701 25 + 194502333 CATAAGGTCCTGGAAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835311 25 + 195804263 CATAAGGTCCTGGAAGAGAGAGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873060 25 + 4876863 CATAAAGTCATAGAAGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761505 25 + 115148730 CATAAGGTCCTGGAAGAGAGAGGGT i nomLeu3.chr7b T 241 C 0 s rheMac8.chr5 189045119 25 + 190429646 CATAAGGTCCTGGAAGAGAGAGGGT i rheMac8.chr5 C 0 T 15 s macFas5.chr5 187987946 25 + 189454096 CATAAGGTCCTGGAAGAGAGAAGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379332 25 - 25927173 CATAAGGTCCTGGAAGAGAGAGGGT i macNem1.NW_012013133v1 C 0 T 15 s chlSab2.chr7 134365767 25 + 135778131 CGTAAGGTCCTGGACGAGAGAGGGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929832 25 + 2368649 CATAAGGTCCTGGAAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=8736.000000 s hg38.chr4_KI270789v1_alt 167542 4 + 205944 TGTA s panTro5.chr4 192955726 4 + 194502333 TGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835336 4 + 195804263 TGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873085 4 + 4876863 TGTA i gorGor5.CYUI01015356v1 C 0 I 244 s nomLeu3.chr7b 112761530 4 + 115148730 TGTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 4 + 189454096 TGTA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134365792 4 + 135778131 TGTA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929857 4 + 2368649 TGTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 15 - 25927173 T e rheMac8.chr5 189045144 15 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=13449.000000 s hg38.chr4_KI270789v1_alt 167546 8 + 205944 GATGACCT s panTro5.chr4 192955730 8 + 194502333 GATGACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835340 8 + 195804263 GATGACCT i panPan2.chr4 C 0 I 2982 s nomLeu3.chr7b 112761534 8 + 115148730 GATGACCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987975 8 + 189454096 GATTACCT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134365796 8 + 135778131 GATTACCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929861 8 + 2368649 GATTACCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 15 - 25927173 T e rheMac8.chr5 189045144 15 + 190429646 T e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=37373.000000 s hg38.chr4_KI270789v1_alt 167554 33 + 205944 GATGTCCAAATGGGAAGAAATAGCATAAGGTCG s panTro5.chr4 192955738 33 + 194502333 GATGTCCAAATGGGAGGTGATAGCATAAGGTCC i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761542 33 + 115148730 GATGTCCAAATAGGAGGTAACAGCATAGGGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987983 33 + 189454096 GATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134365804 33 + 135778131 GATGTCCACGTGGGAGGTGATAGCATAAGGTCC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929869 33 + 2368649 GATGTCCACGTAGGAGGTGATAGCGTAAGGTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 15 - 25927173 T e rheMac8.chr5 189045144 15 + 190429646 T e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e panPan2.chr4 192835348 2982 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=17738.000000 s hg38.chr4_KI270789v1_alt 167587 7 + 205944 TGGAAGA s panTro5.chr4 192955771 7 + 194502333 TGGAAGA i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761575 7 + 115148730 TGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045129 7 + 190429646 TGGAAGA i rheMac8.chr5 T 15 T 120 s macFas5.chr5 187988016 7 + 189454096 TGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379342 7 - 25927173 TGGAAGA i macNem1.NW_012013133v1 T 15 T 120 s chlSab2.chr7 134365837 7 + 135778131 TGGGAGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929902 7 + 2368649 TGGAAGA i colAng1.NW_012116221v1 C 0 T 240 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e panPan2.chr4 192835348 2982 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=4125.000000 s hg38.chr4_KI270789v1_alt 167594 6 + 205944 CAAAGG s panTro5.chr4 192955778 6 + 194502333 CAGAGG i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761582 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s chlSab2.chr7 134365844 6 + 135778131 CAGAGG i chlSab2.chr7 C 0 T 118 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e panPan2.chr4 192835348 2982 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3018.000000 s hg38.chr4_KI270789v1_alt 167600 6 + 205944 TGTTGC s panTro5.chr4 192955784 6 + 194502333 TGTTGT i panTro5.chr4 C 0 C 0 s nomLeu3.chr7b 112761588 6 + 115148730 TGTTGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 6 + 189454096 TGTTGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e panPan2.chr4 192835348 2982 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=422.000000 s hg38.chr4_KI270789v1_alt 167606 1 + 205944 G s panTro5.chr4 192955790 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838330 1 + 195804263 A i panPan2.chr4 I 2982 C 0 s nomLeu3.chr7b 112761594 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987914 1 + 189454096 A i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873089 244 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=54444.000000 s hg38.chr4_KI270789v1_alt 167607 49 + 205944 GATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGATCCTGGAATAC s panTro5.chr4 192955791 49 + 194502333 GATTACCTGAAGTCCAAATAGGAAGTAATAGCATAAGGTCCTCGAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838331 49 + 195804263 CATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTCGAAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873333 49 + 4876863 GATTACCTTATGTCCAAACAGGAGTTAATAGCATAAGGTCCTGGAAGAC i gorGor5.CYUI01015356v1 I 244 C 0 s nomLeu3.chr7b 112761595 49 + 115148730 GATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 I 186 s macFas5.chr5 187987915 49 + 189454096 GATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3718.000000 s hg38.chr4_KI270789v1_alt 167656 5 + 205944 AAAGG s panTro5.chr4 192955840 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838380 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873382 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987964 5 + 189454096 AGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761644 186 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 167661 1 + 205944 T s panTro5.chr4 192955845 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838385 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873387 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761644 186 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=5000.000000 s hg38.chr4_KI270789v1_alt 167662 5 + 205944 GTTGT s panTro5.chr4 192955846 5 + 194502333 GTTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838386 5 + 195804263 GTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873388 5 + 4876863 GTTTT i gorGor5.CYUI01015356v1 C 0 T 2519 s nomLeu3.chr7b 112761830 5 + 115148730 GTTGT i nomLeu3.chr7b I 186 C 0 s macFas5.chr5 187987909 5 + 189454096 GTTGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=16529.000000 s hg38.chr4_KI270789v1_alt 167667 21 + 205944 AGATTACCTGATGTCTAAATC s panTro5.chr4 192955851 21 + 194502333 AGATTACCTGATGTCCAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838391 21 + 195804263 AGATTACCTGATGTCCAAATA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761835 21 + 115148730 AGATTACCTGATGTCCAAATT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987914 21 + 189454096 AGATTACCTGATGTCCACGTA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873393 2519 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=29988.000000 s hg38.chr4_KI270789v1_alt 167688 25 + 205944 GGAAGTAATAGCATAAGGTCCTGGG s panTro5.chr4 192955872 25 + 194502333 GCAGGAAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838412 25 + 195804263 GGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870874 25 + 4876863 GGAGGTAATAGCATAAGGTCCTGGG i gorGor5.CYUI01015356v1 T 2519 C 0 s nomLeu3.chr7b 112761856 25 + 115148730 GCAGATAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987935 25 + 189454096 GGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4605.000000 s hg38.chr4_KI270789v1_alt 167713 4 + 205944 AGAC s panTro5.chr4 192955897 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838437 4 + 195804263 AGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870899 4 + 4876863 AGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761881 4 + 115148730 AGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929909 240 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=79516.000000 s hg38.chr4_KI270789v1_alt 167717 24 + 205944 AAAGGTGTTGTGGATTACCTGATG s panTro5.chr4 192955901 24 + 194502333 AAAGGTGTTGTAGATTACCTGATG i panTro5.chr4 C 0 I 1207 s panPan2.chr4 192838441 24 + 195804263 AAAGGTGTTGTAGATTACCTGATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870903 24 + 4876863 AAAGGTGTTGTAGATTACCTGATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761885 24 + 115148730 AAAAGTGTTGTAGATTACCTGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 24 + 190429646 AAAGGTGTTGTAGATTACCTGATG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 24 + 189454096 AAAGGTGTTGTAGATTACCTGATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 24 - 25927173 AAAGGTGTTGTAGATTACCTGATG i macNem1.NW_012013133v1 T 120 C 0 s colAng1.NW_012116221v1 929669 24 + 2368649 AAAGGTGTTGTAGATTACCTGATG i colAng1.NW_012116221v1 T 240 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=93013.000000 s hg38.chr4_KI270789v1_alt 167741 37 + 205944 TCCAAATAGGAGGAAATGGCATAATGTCATGGAAGAG s panTro5.chr4 192957132 37 + 194502333 TCCAAATAGGAGGTAATAGCATAAGGTGCTGGTAGAG i panTro5.chr4 I 1207 C 0 s panPan2.chr4 192838465 37 + 195804263 TCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870927 37 + 4876863 TCCAAATAGGAGGAAATGGCGTAAGGGCATGGAAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761909 37 + 115148730 TCCAAATAGGTGGTAATAGCATAAGGTCCGCGAAGAG i nomLeu3.chr7b C 0 T 302 s rheMac8.chr5 189045040 37 + 190429646 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987927 37 + 189454096 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379253 37 - 25927173 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929693 37 + 2368649 TCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=80291.000000 s hg38.chr4_KI270789v1_alt 167778 29 + 205944 AGAGGGCAGTAGATTACCTGATGTCCAAA s panTro5.chr4 192957169 29 + 194502333 AGAGGGCTGTAGATTACTTGATGTCCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838502 29 + 195804263 AGAGGGCTGTAGATTACCTGATGTCCAAA i panPan2.chr4 C 0 T 3572 s gorGor5.CYUI01015356v1 3870964 29 + 4876863 AGAGGGCACTAGATTACCTGATGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761644 29 + 115148730 AGAGGGCTGTAGATTACATGATGTCCAAA i nomLeu3.chr7b T 302 C 0 s rheMac8.chr5 189045077 29 + 190429646 AGAAGGTTGTAGATTACCTGATGTCCACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987964 29 + 189454096 AGAAGGTTGTAGATTACCTGATGTCCACG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379290 29 - 25927173 AGAAGGTTGTAGATTACCTGATGTCCACG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929730 29 + 2368649 AGAGGGTTGTAGATTACCTGATGTCCACG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=9842.000000 s hg38.chr4_KI270789v1_alt 167807 4 + 205944 CAGG s panTro5.chr4 192957198 4 + 194502333 TAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870993 4 + 4876863 TAGG i gorGor5.CYUI01015356v1 C 0 I 1086 s nomLeu3.chr7b 112761673 4 + 115148730 TAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045106 4 + 190429646 TAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987993 4 + 189454096 TAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379319 4 - 25927173 TAGG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929759 4 + 2368649 TAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192838531 3572 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=39663.000000 s hg38.chr4_KI270789v1_alt 167811 19 + 205944 AGCTAATAGCGTATGGTCC s panTro5.chr4 192957202 19 + 194502333 AGGTAAGAGCATAAGGTCC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872083 19 + 4876863 AGTTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 I 1086 C 0 s nomLeu3.chr7b 112761677 19 + 115148730 AGGAAATAGCATAAGGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045110 19 + 190429646 AGGTGATAGCATAAGGTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987997 19 + 189454096 AGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379323 19 - 25927173 AGGTGATAGCATAAGGTCC i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929763 19 + 2368649 AGCTGATAGCATAAGGTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192838531 3572 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=36045.000000 s hg38.chr4_KI270789v1_alt 167830 12 + 205944 TGGGAGAGAGAG s panTro5.chr4 192957221 12 + 194502333 TGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834959 12 + 195804263 TGGAAGAGAGAG i panPan2.chr4 T 3572 C 0 s gorGor5.CYUI01015356v1 3872102 12 + 4876863 TTGGAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761696 12 + 115148730 TGGAAGAGAGAC i nomLeu3.chr7b C 0 T 420 s rheMac8.chr5 189045129 12 + 190429646 TGGAAGAGAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988016 12 + 189454096 TGGAAGAGAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379342 12 - 25927173 TGGAAGAGAGAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929782 12 + 2368649 TGGAAGAGAGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=9500.000000 s hg38.chr4_KI270789v1_alt 167842 3 + 205944 GGT s panTro5.chr4 192957233 3 + 194502333 GGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834971 3 + 195804263 GGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872114 3 + 4876863 GGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761288 3 + 115148730 GGC i nomLeu3.chr7b T 420 C 0 s rheMac8.chr5 189045141 3 + 190429646 GGT i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988028 3 + 189454096 GGT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379354 3 - 25927173 GGT i macNem1.NW_012013133v1 C 0 T 120 s colAng1.NW_012116221v1 929794 3 + 2368649 GGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4011.000000 s hg38.chr4_KI270789v1_alt 167845 2 + 205944 TG s panTro5.chr4 192957236 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834974 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872117 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 I 1470 s nomLeu3.chr7b 112761291 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 2 + 189454096 TG i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929797 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61283.000000 s hg38.chr4_KI270789v1_alt 167847 56 + 205944 TAGAGTACCCGATGTGCAGATAGGAGGTAATAGCATAAAGTCCTGAAAGAGAGAGC s panTro5.chr4 192957238 55 + 194502333 TAGATTACCCGATTTCCA-ATAGGAGGTAATAGCATAAGATCCTGCAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834976 56 + 195804263 TAGATTACCCGATGTCCAGATAGGAGGTAATAGCATAAAGTCCTGCAAGAGAGAGC i panPan2.chr4 C 0 I 3534 s nomLeu3.chr7b 112761293 56 + 115148730 TAGATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCCGAAAGAGAGGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987973 56 + 189454096 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929799 56 + 2368649 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3872119 1470 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 167903 2 + 205944 GT s panTro5.chr4 192957293 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838566 2 + 195804263 GT i panPan2.chr4 I 3534 C 0 s nomLeu3.chr7b 112761349 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988029 2 + 189454096 GT i macFas5.chr5 C 0 T 60 s colAng1.NW_012116221v1 929855 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3872119 1470 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=16848.000000 s hg38.chr4_KI270789v1_alt 167905 16 + 205944 TGTACATTATCTGATA s panTro5.chr4 192957295 16 + 194502333 TGTAGATCATCTGATG i panTro5.chr4 C 0 T 1386 s panPan2.chr4 192838568 16 + 195804263 TGTGGATTACCTGATG i panPan2.chr4 C 0 I 61 s nomLeu3.chr7b 112761351 16 + 115148730 TGTACATTACATGATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 16 + 189454096 TGTAGATTACCTGATG i macFas5.chr5 T 60 C 0 s colAng1.NW_012116221v1 929857 16 + 2368649 TGTAGATTACCTGATG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3872119 1470 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=42031.000000 s hg38.chr4_KI270789v1_alt 167921 25 + 205944 TCCAAATAGGAGGTAATAGCATAAG s panTro5.chr4 192955925 25 + 194502333 CCCAAATAGAAGGTAATAGCATAAG i panTro5.chr4 T 1386 C 0 s panPan2.chr4 192838645 25 + 195804263 TCCAAACAGGAGGTAATAGCATAAG i panPan2.chr4 I 61 C 0 s gorGor5.CYUI01015356v1 3873589 25 + 4876863 TCCAAATAGGAGGTAATAGCATAAG i gorGor5.CYUI01015356v1 I 1470 C 0 s nomLeu3.chr7b 112761367 25 + 115148730 TCCAAATAGGAGGTAATAGCATAAG i nomLeu3.chr7b C 0 I 360 s macFas5.chr5 187987987 25 + 189454096 TCCACGTAGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929873 25 + 2368649 TCCACGTAGGAGGTGATAGCGTAAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11286.000000 s hg38.chr4_KI270789v1_alt 167946 7 + 205944 GTCCTGG s panTro5.chr4 192955950 7 + 194502333 GTCCTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838670 7 + 195804263 GTCCTCG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873614 7 + 4876863 GTCCTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761752 7 + 115148730 GTCCTCA i nomLeu3.chr7b I 360 C 0 s macFas5.chr5 187988012 7 + 189454096 GTCCTGG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929898 7 + 2368649 GTCCTGG i colAng1.NW_012116221v1 C 0 T 171 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=295.000000 s hg38.chr4_KI270789v1_alt 167953 1 + 205944 T s panTro5.chr4 192955957 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838677 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873621 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761759 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988019 1 + 189454096 A i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=12998.000000 s hg38.chr4_KI270789v1_alt 167954 12 + 205944 AGACAAAGGCGT s panTro5.chr4 192955958 12 + 194502333 AGACAAAGGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838678 12 + 195804263 AAACAAAGGTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873622 12 + 4876863 AGACAAAAGCGT i gorGor5.CYUI01015356v1 C 0 T 1397 s nomLeu3.chr7b 112761760 12 + 115148730 AGACAAAGGTGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 12 + 189454096 AGAGAAAGGTGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=36473.000000 s hg38.chr4_KI270789v1_alt 167966 30 + 205944 TGTAGATTAACTGATGTCCAAATAGGAGGA s panTro5.chr4 192955970 30 + 194502333 TGTAGATTACTTGATGTCCAAATAGGAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838690 30 + 195804263 TGTAGATTACCTGATGTCCAAATAGGAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872237 30 + 4876863 TGTAGATTACCTGATGTCCAAATAGGAGGA i gorGor5.CYUI01015356v1 T 1397 C 0 s nomLeu3.chr7b 112761772 30 + 115148730 TGTAGATGACCTGATGTCCAAATAGGAGGT i nomLeu3.chr7b C 0 T 599 s macFas5.chr5 187987911 30 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=29158.000000 s hg38.chr4_KI270789v1_alt 167996 27 + 205944 AATAGCATAAGATCATGGAAGAGAGAG s panTro5.chr4 192956000 27 + 194502333 AATAGCATAAGGTCCTGGAAGACAAAG i panTro5.chr4 C 0 I 1386 s panPan2.chr4 192838720 27 + 195804263 AATAGCATAAGGTGCTGGAAGAGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872267 27 + 4876863 AATAGCATAAGGTCTTGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761203 27 + 115148730 AATAGCATAAGATACAAGAAGAGAGAG i nomLeu3.chr7b T 599 C 0 s macFas5.chr5 187987941 27 + 189454096 GATAGCATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=45905.000000 s hg38.chr4_KI270789v1_alt 168023 44 + 205944 GGCAGTAGATTACCTGATGTCGAAATAGCAGGTAAGAGCATACT s panTro5.chr4 192957413 44 + 194502333 GGCAGTAGATTACCTGATGTCCAAATAGCAGGTAATAGCATAAT i panTro5.chr4 I 1386 C 0 s panPan2.chr4 192838747 44 + 195804263 GGCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872294 44 + 4876863 GGCAGTAGATTACCTGATGTCCAAATAGCAGGTAATAGCATACG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761230 44 + 115148730 GGCTGTAGATGACCTGATGTCCAAGTAGGAGGTAATAGCATAAG i nomLeu3.chr7b C 0 I 118 s macFas5.chr5 187987968 44 + 189454096 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=18690.000000 s hg38.chr4_KI270789v1_alt 168067 13 + 205944 GTCCTGGAAGAGA s panTro5.chr4 192957457 13 + 194502333 GTCCTGGAAGAGA i panTro5.chr4 C 0 T 1443 s panPan2.chr4 192838791 13 + 195804263 GTCCTGGAAGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872338 13 + 4876863 GTCCTGGAAGAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761392 13 + 115148730 GTCCTGGAAGAGA i nomLeu3.chr7b I 118 C 0 s macFas5.chr5 187988012 13 + 189454096 GTCCTGGAAGAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2368.000000 s hg38.chr4_KI270789v1_alt 168080 3 + 205944 GGG s panTro5.chr4 192956027 3 + 194502333 GTG i panTro5.chr4 T 1443 C 0 s panPan2.chr4 192838804 3 + 195804263 GGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872351 3 + 4876863 GTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761405 3 + 115148730 GGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988025 3 + 189454096 GAG i macFas5.chr5 C 0 T 58 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=294.000000 s hg38.chr4_KI270789v1_alt 168083 1 + 205944 C s panTro5.chr4 192956030 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838807 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872354 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 I 1279 s nomLeu3.chr7b 112761408 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987970 1 + 189454096 T i macFas5.chr5 T 58 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4230.000000 s hg38.chr4_KI270789v1_alt 168084 3 + 205944 TGT s panTro5.chr4 192956031 3 + 194502333 TGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838808 3 + 195804263 TGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873634 3 + 4876863 TGT i gorGor5.CYUI01015356v1 I 1279 T 244 s nomLeu3.chr7b 112761409 3 + 115148730 TGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987971 3 + 189454096 TGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=28030.000000 s hg38.chr4_KI270789v1_alt 168087 23 + 205944 AGATTACCTGATGTCCAAATAGG s panTro5.chr4 192956034 23 + 194502333 AGATTACCTGATGTCTAAATAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838811 23 + 195804263 AGATTACGTGATGTCCAATTAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873393 23 + 4876863 AGATTACCTGATGTCCAAGTAGG i gorGor5.CYUI01015356v1 T 244 C 0 s nomLeu3.chr7b 112761412 23 + 115148730 AGATTACCTGATGTCCAAATAGG i nomLeu3.chr7b C 0 I 121 s macFas5.chr5 187987974 23 + 189454096 AGATTACCTGATGTCCACGTAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=37021.000000 s hg38.chr4_KI270789v1_alt 168110 32 + 205944 AGGAAATAGCATAAGGTCCTGGAGGACAAAGG s panTro5.chr4 192956057 32 + 194502333 AAGTAATAGCATAAGGTCCTGGGAGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838834 32 + 195804263 AGGTAATAGCATAAGGTCCTCGACGACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873416 32 + 4876863 AGGTAATAGCATAAGGTCCTGGAAGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761556 32 + 115148730 AGGTAACAGCATAGGGTCCTGGAAGACAAAGG i nomLeu3.chr7b I 121 C 0 s macFas5.chr5 187987997 32 + 189454096 AGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macFas5.chr5 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 168142 1 + 205944 T s panTro5.chr4 192956089 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838866 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873448 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e macFas5.chr5 187988029 60 + 189454096 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 168143 2 + 205944 GT s panTro5.chr4 192956090 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838867 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873449 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761589 2 + 115148730 GT i nomLeu3.chr7b C 0 I 120 s macFas5.chr5 187987969 2 + 189454096 GT i macFas5.chr5 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=56231.000000 s hg38.chr4_KI270789v1_alt 168145 49 + 205944 TGTAGATTACATGATGTCCAAATAGGACGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192956092 49 + 194502333 TGTAGATTACATGATGTCCAAATAGGACGTAATAGCGTAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838869 49 + 195804263 TGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873451 49 + 4876863 TGTAGATTACCTGATTTCCAAATAGAAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761711 49 + 115148730 TGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b I 120 C 0 s macFas5.chr5 187987971 49 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=42655.000000 s hg38.chr4_KI270789v1_alt 168194 34 + 205944 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAA s panTro5.chr4 192956141 34 + 194502333 AGACAAAGGTGTTGTAGATTACCTGATATCCAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838918 34 + 195804263 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873500 34 + 4876863 AGACAAAGGTTTTGTAGATTACCTGATGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 34 + 115148730 AGACAAAGGTGTTGTAGATGACCTGATGTCCAAA i nomLeu3.chr7b C 0 T 149 s macFas5.chr5 187987899 34 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9173.000000 s hg38.chr4_KI270789v1_alt 168228 11 + 205944 TAGGAGGTAAT s panTro5.chr4 192956175 11 + 194502333 TAGGAGGTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838952 11 + 195804263 TAGGAGGTCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873534 11 + 4876863 TAGGAGGTAAT i gorGor5.CYUI01015356v1 C 0 I 216 s macFas5.chr5 187987933 11 + 189454096 TAGGAGGTGAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e nomLeu3.chr7b 112761794 149 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7543.000000 s hg38.chr4_KI270789v1_alt 168239 19 + 205944 AGAATACGGTCCTGGAAGA s panTro5.chr4 192956186 19 + 194502333 AGAATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838963 18 + 195804263 AG-ATAAGGTGCTGGAAGA i panPan2.chr4 C 0 C 0 s macFas5.chr5 187987944 19 + 189454096 AGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e nomLeu3.chr7b 112761794 149 + 115148730 T e gorGor5.CYUI01015356v1 3873545 216 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2910.000000 s hg38.chr4_KI270789v1_alt 168258 3 + 205944 GAG s panTro5.chr4 192956205 3 + 194502333 GAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838981 3 + 195804263 GAG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761645 3 + 115148730 GAG i nomLeu3.chr7b T 149 C 0 s macFas5.chr5 187987963 3 + 189454096 GAG i macFas5.chr5 C 0 I 4 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3873545 216 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1020.000000 s hg38.chr4_KI270789v1_alt 168261 2 + 205944 --GG s panTro5.chr4 192956208 2 + 194502333 --GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838984 4 + 195804263 ACGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761648 2 + 115148730 --GG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e macFas5.chr5 187987966 4 + 189454096 I e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3873545 216 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=4411.000000 s hg38.chr4_KI270789v1_alt 168263 6 + 205944 CTGTAA s panTro5.chr4 192956210 6 + 194502333 CTGTAA i panTro5.chr4 C 0 I 1686 s panPan2.chr4 192838988 6 + 195804263 CTGTAG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761650 6 + 115148730 CTGTAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987970 6 + 189454096 TTGTAG i macFas5.chr5 I 4 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e gorGor5.CYUI01015356v1 3873545 216 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=16600.000000 s hg38.chr4_KI270789v1_alt 168269 22 + 205944 ATTACCT-------------------------------------------------------------GATGTCCAAATAGGA s panTro5.chr4 192957902 83 + 194502333 ATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGATGACAAAGTTGTTGTAGGTTACCGGATGTCCAAATAGGA i panTro5.chr4 I 1686 C 0 s panPan2.chr4 192838994 22 + 195804263 ATTACCT-------------------------------------------------------------GATATCCAAATAGGA i panPan2.chr4 C 0 T 1147 s gorGor5.CYUI01015356v1 3873761 22 + 4876863 ATTACCT-------------------------------------------------------------GATGTCCAAATAGGA i gorGor5.CYUI01015356v1 I 216 C 0 s nomLeu3.chr7b 112761656 22 + 115148730 ATTACAT-------------------------------------------------------------GATGTCCAAATAGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987976 22 + 189454096 ATTACCT-------------------------------------------------------------GATGTCCACGTAGGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=25069.000000 s hg38.chr4_KI270789v1_alt 168291 20 + 205944 GGTAATAGAATAAGGTCCTG s panTro5.chr4 192957985 20 + 194502333 GGTAATAGAATAAGGTCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837869 20 + 195804263 GGTAATAGAATAAGGTCCTG i panPan2.chr4 T 1147 C 0 s gorGor5.CYUI01015356v1 3873783 20 + 4876863 GGTAATAGAATAAGGTCCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761678 20 + 115148730 GGAAATAGCATAAGGTCCTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987998 20 + 189454096 GGTGATAGCATAAGGTCCTG i macFas5.chr5 C 0 T 118 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8469.000000 s hg38.chr4_KI270789v1_alt 168311 8 + 205944 GAGGAGAG s panTro5.chr4 192958005 8 + 194502333 GAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837889 8 + 195804263 GAGGAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873803 8 + 4876863 GAAGAGAG i gorGor5.CYUI01015356v1 C 0 T 1399 s nomLeu3.chr7b 112761698 8 + 115148730 GAAGAGAG i nomLeu3.chr7b C 0 I 2 s macFas5.chr5 187987900 8 + 189454096 GAGAAAGG i macFas5.chr5 T 118 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929905 171 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3697.000000 s hg38.chr4_KI270789v1_alt 168319 3 + 205944 GGC s panTro5.chr4 192958013 3 + 194502333 GGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837897 3 + 195804263 GGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872412 3 + 4876863 GGC i gorGor5.CYUI01015356v1 T 1399 C 0 s nomLeu3.chr7b 112761708 3 + 115148730 GGC i nomLeu3.chr7b I 2 C 0 s macFas5.chr5 187987908 3 + 189454096 TGT i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929734 3 + 2368649 GGT i colAng1.NW_012116221v1 T 171 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 118 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379357 120 - 25927173 T e rheMac8.chr5 189045144 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=21285.000000 s hg38.chr4_KI270789v1_alt 168322 5 + 205944 TGTAG s panTro5.chr4 192958016 5 + 194502333 TGTAG i panTro5.chr4 C 0 T 1805 s panPan2.chr4 192837900 5 + 195804263 TGTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872415 5 + 4876863 TGTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761711 5 + 115148730 TGTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045024 5 + 190429646 TGTAG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987911 5 + 189454096 TGTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379237 5 - 25927173 TGTAG i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365732 5 + 135778131 TGTAG i chlSab2.chr7 T 118 C 0 s colAng1.NW_012116221v1 929737 5 + 2368649 TGTAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=179206.000000 s hg38.chr4_KI270789v1_alt 168327 53 + 205944 ATTACCTGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAGAGG s panTro5.chr4 192956216 53 + 194502333 ATTACCTGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAGAGG i panTro5.chr4 T 1805 C 0 s panPan2.chr4 192837905 53 + 195804263 ATTACCTGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872420 53 + 4876863 ATGACATGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGAAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761716 53 + 115148730 ATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAAAGACAAAGG i nomLeu3.chr7b C 0 T 96 s rheMac8.chr5 189045029 53 + 190429646 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987916 53 + 189454096 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379242 53 - 25927173 ATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365737 53 + 135778131 ATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929742 53 + 2368649 ATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4498.000000 s hg38.chr4_KI270789v1_alt 168380 5 + 205944 GCTTA s panTro5.chr4 192956269 5 + 194502333 GATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837958 5 + 195804263 GCTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872473 5 + 4876863 GCATT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045082 5 + 190429646 GTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 5 + 189454096 GTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 5 - 25927173 GTTGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 5 + 135778131 GTTGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 5 + 2368649 GTTGT i colAng1.NW_012116221v1 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 96 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11052.000000 s hg38.chr4_KI270789v1_alt 168385 5 + 205944 AGATA s panTro5.chr4 192956274 5 + 194502333 AGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837963 5 + 195804263 AGATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872478 5 + 4876863 ACATT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045087 5 + 190429646 AGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987974 5 + 189454096 AGATT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379300 5 - 25927173 AGATT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365795 5 + 135778131 AGATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929680 5 + 2368649 AGATT i colAng1.NW_012116221v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 96 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=39706.000000 s hg38.chr4_KI270789v1_alt 168390 14 + 205944 ACCTGATGTCC-AAG s panTro5.chr4 192956279 14 + 194502333 ACCTGATGTCC-AAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837968 15 + 195804263 ACCTGATGTCCAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872483 14 + 4876863 ACCTGACGTCC-AAG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045092 14 + 190429646 ACCTGATGTCC-ACG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987919 14 + 189454096 ACCTGATGTCC-ACG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379305 14 - 25927173 ACCTGATGTCC-ACG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365800 14 + 135778131 ACCTGATGTCC-ACG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929685 14 + 2368649 ACCTGATGTCC-ACG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 96 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=133038.000000 s hg38.chr4_KI270789v1_alt 168404 36 + 205944 TAGG-AGGTAATAGCATAAGGTCCTGGAAGAGAGAGG s panTro5.chr4 192956293 36 + 194502333 TAGG-AGGTAATAGCATAAGGTCTTGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837983 37 + 195804263 TAGGAAGGTAATAGCATAAGGTCTTGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872497 36 + 4876863 TAGG-AGGTAATAGCATAAGGTCCTGGAAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761673 36 + 115148730 TAGG-AGGAAATAGCATAAGGTCCTGGAAGAGAGACG i nomLeu3.chr7b T 96 C 0 s rheMac8.chr5 189045106 36 + 190429646 TAGG-AGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987933 36 + 189454096 TAGG-AGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 T 58 s macNem1.NW_012013133v1 24379319 36 - 25927173 TAGG-AGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365814 36 + 135778131 TGGG-AGGTGATAGCATAAGGTCCTGGGAGACAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929699 36 + 2368649 TAGG-AGCTGATAGCGTAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 I 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=2895.000000 s hg38.chr4_KI270789v1_alt 168440 2 + 205944 GT s panTro5.chr4 192956329 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838020 2 + 195804263 TT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872533 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 2 + 115148730 GC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045142 2 + 190429646 GT i rheMac8.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379355 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 T 60 s chlSab2.chr7 134365850 2 + 135778131 GT i chlSab2.chr7 C 0 T 128 s colAng1.NW_012116221v1 929855 2 + 2368649 GT i colAng1.NW_012116221v1 I 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macFas5.chr5 187987969 58 + 189454096 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=133455.000000 s hg38.chr4_KI270789v1_alt 168442 51 + 205944 TGTAGATTACATGATGTTCTAATAGAAGGTAACAGCATAAGGTCCTGGAAG s panTro5.chr4 192956331 51 + 194502333 TGTAGATATCATGATGTTCTAATAGAAGGTAACAGCATAAGGTCCTGGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838022 51 + 195804263 TGTAGATATCATGATGTTCTAATAGAAGGTAACAGCATAAGGTCCTGGAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872535 51 + 4876863 TGTAGATTACATGATATTCAAATAGAAGGTAACAGCATAAGGTCCTGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761711 51 + 115148730 TGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAAAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045084 51 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i rheMac8.chr5 T 60 T 119 s macFas5.chr5 187987911 51 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macFas5.chr5 T 58 C 0 s macNem1.NW_012013133v1 24379297 51 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAG i macNem1.NW_012013133v1 T 60 T 119 s colAng1.NW_012116221v1 929857 51 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAG i colAng1.NW_012116221v1 C 0 T 113 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-455.000000 s hg38.chr4_KI270789v1_alt 168493 2 + 205944 -GC s panTro5.chr4 192956382 2 + 194502333 -GC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838073 2 + 195804263 -GC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872586 2 + 4876863 -GC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761762 2 + 115148730 -AC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987962 2 + 189454096 AG- i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929908 113 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365852 128 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379348 119 - 25927173 T e rheMac8.chr5 189045135 119 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19256.000000 s hg38.chr4_KI270789v1_alt 168495 6 + 205944 AAAGGT s panTro5.chr4 192956384 6 + 194502333 AAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838075 6 + 195804263 AAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872588 6 + 4876863 AAAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761764 6 + 115148730 AAAGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 6 + 190429646 AAAGGT i rheMac8.chr5 T 119 C 0 s macFas5.chr5 187987903 6 + 189454096 AAAGGT i macFas5.chr5 T 61 C 0 s macNem1.NW_012013133v1 24379229 6 - 25927173 AAAGGT i macNem1.NW_012013133v1 T 119 C 0 s chlSab2.chr7 134365724 6 + 135778131 AAAGGT i chlSab2.chr7 T 128 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929908 113 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=217796.000000 s hg38.chr4_KI270789v1_alt 168501 60 + 205944 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGG s panTro5.chr4 192956390 60 + 194502333 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGG i panTro5.chr4 C 0 T 1694 s panPan2.chr4 192838081 60 + 195804263 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872594 60 + 4876863 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGAAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761770 60 + 115148730 GTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 60 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 60 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 60 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 60 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 60 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 T 113 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=111773.000000 s hg38.chr4_KI270789v1_alt 168561 30 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAG s panTro5.chr4 192954756 30 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAG i panTro5.chr4 T 1694 C 0 s panPan2.chr4 192838141 30 + 195804263 GTTGTCGATTACCTGATGTCCAAATAGGAG i panPan2.chr4 C 0 I 486 s gorGor5.CYUI01015356v1 3872654 30 + 4876863 GTTGTAGATTACCTGATGTTCAAATAGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761830 30 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 30 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 30 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 30 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 30 + 135778131 GTTGTAGATTACCTGATGTCCACGTGGGAG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929855 30 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=60456.000000 s hg38.chr4_KI270789v1_alt 168591 18 + 205944 ATAATAGCATAAAGTCCT s panTro5.chr4 192954786 18 + 194502333 GAAATAGCATAAGGTCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838657 18 + 195804263 GTAATAGCATAAGGTCCT i panPan2.chr4 I 486 C 0 s gorGor5.CYUI01015356v1 3872684 18 + 4876863 GTAATACGGTAAGGTCCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761860 18 + 115148730 ATAATAGCATAAGGTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045112 18 + 190429646 GTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 T 114 s macFas5.chr5 187987999 18 + 189454096 GTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379325 18 - 25927173 GTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 T 114 s chlSab2.chr7 134365820 18 + 135778131 GTGATAGCATAAGGTCCT i chlSab2.chr7 C 0 T 114 s colAng1.NW_012116221v1 929885 18 + 2368649 GTGATAGCGTAAGGTCCT i colAng1.NW_012116221v1 C 0 T 234 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=11015.000000 s hg38.chr4_KI270789v1_alt 168609 12 + 205944 TGAACACAAAGG s panTro5.chr4 192954804 12 + 194502333 GGAAAACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838675 12 + 195804263 CGAAAACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872702 12 + 4876863 GGAAGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761878 12 + 115148730 GGAAGACAAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988017 12 + 189454096 GGAAGAGAGAGG i macFas5.chr5 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 168621 1 + 205944 T s panTro5.chr4 192954816 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838687 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872714 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761890 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187988029 60 + 189454096 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=39210.000000 s hg38.chr4_KI270789v1_alt 168622 30 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAG s panTro5.chr4 192954817 30 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838688 30 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAG i panPan2.chr4 C 0 T 547 s gorGor5.CYUI01015356v1 3872715 30 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761891 30 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 30 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAG i macFas5.chr5 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=24917.000000 s hg38.chr4_KI270789v1_alt 168652 25 + 205944 GTAATAGCATAAAGTCCTGGAAGAC s panTro5.chr4 192954847 25 + 194502333 GAAATAGCATAAGGTCATGGAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838171 25 + 195804263 GTAATACCGTAAGGTCCTGGAAGAC i panPan2.chr4 T 547 C 0 s gorGor5.CYUI01015356v1 3872745 25 + 4876863 GTAATAGCATAAGGTCCTGGAATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761921 25 + 115148730 GTAATAGCATAAGGTCCGCGAAGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987999 25 + 189454096 GTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154298 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5356.000000 s hg38.chr4_KI270789v1_alt 168677 5 + 205944 AAAGG s panTro5.chr4 192954872 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838196 5 + 195804263 ACAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872770 5 + 4876863 GAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761946 5 + 115148730 AAAGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988024 5 + 189454096 AGAGG i macFas5.chr5 C 0 T 121 s saiBol1.JH378165 13154298 5 - 14256875 AAAGA i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61185.000000 s hg38.chr4_KI270789v1_alt 168682 36 + 205944 TGTTGTAGATTACCTGATGTCCAAATAGGAGGCAAC s panTro5.chr4 192954877 36 + 194502333 TGTTGTAGATTACCTGATGTCCAACTAGGAGGTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838201 36 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872775 36 + 4876863 TGTTGTAGTTTACCTGATGTCCAAATAGGAGGTAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761951 36 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 36 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGAT i macFas5.chr5 T 121 C 0 s saiBol1.JH378165 13154303 36 - 14256875 TATTGTAGATTACATGATGTCCAAATAGGAGGCAAC i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11515.000000 s hg38.chr4_KI270789v1_alt 168718 9 + 205944 AGCATAAGG s panTro5.chr4 192954913 9 + 194502333 AGCATAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838237 9 + 195804263 AGCATAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872811 9 + 4876863 AGCATAAGG i gorGor5.CYUI01015356v1 C 0 I 734 s nomLeu3.chr7b 112761987 9 + 115148730 AGCATAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987944 9 + 189454096 AGCATAAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5988.000000 s hg38.chr4_KI270789v1_alt 168727 7 + 205944 TCCTCAA s panTro5.chr4 192954922 7 + 194502333 TCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838246 7 + 195804263 TCCTCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873554 7 + 4876863 TCCTGGA i gorGor5.CYUI01015356v1 I 734 C 0 s nomLeu3.chr7b 112761996 7 + 115148730 TCCGCGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987953 7 + 189454096 TCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=47659.000000 s hg38.chr4_KI270789v1_alt 168734 41 + 205944 AGACAAACTTGTTGTAGATTACCTGATGTCCAAATAGGAGG s panTro5.chr4 192954929 41 + 194502333 AGACAAAGGTGTTGTAAATTACCTGATGTCCAAATAGGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838253 41 + 195804263 AGACCAAGTTGTTGTAGATTACCTGATGTCCAAATAGGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873561 41 + 4876863 AGATAAAGTTGTTGTAGATTACCTGGTGTCCAAATAGGAGG i gorGor5.CYUI01015356v1 C 0 T 782 s nomLeu3.chr7b 112762003 41 + 115148730 AGAGAAAGGTGTTGTAGATTACATGATGTCCAAGTAGGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 41 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8909.000000 s hg38.chr4_KI270789v1_alt 168775 13 + 205944 GAATAGCATAAGA s panTro5.chr4 192954970 13 + 194502333 TAATAGTATAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838294 13 + 195804263 GAATAGCATAAGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762044 13 + 115148730 TAATAGCATAAAG i nomLeu3.chr7b C 0 I 1 s macFas5.chr5 187987940 13 + 189454096 TGATAGCATAAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e gorGor5.CYUI01015356v1 3873602 782 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5730.000000 s hg38.chr4_KI270789v1_alt 168788 4 + 205944 TCCT s panTro5.chr4 192954983 4 + 194502333 TCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838307 4 + 195804263 TCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872820 4 + 4876863 TCCT i gorGor5.CYUI01015356v1 T 782 C 0 s nomLeu3.chr7b 112762058 4 + 115148730 TCCT i nomLeu3.chr7b I 1 C 0 s macFas5.chr5 187987953 4 + 189454096 TCCT i macFas5.chr5 C 0 I 15 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4874.000000 s hg38.chr4_KI270789v1_alt 168792 6 + 205944 GGAAGA s panTro5.chr4 192954987 6 + 194502333 GGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838311 6 + 195804263 GGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872824 6 + 4876863 GGAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762062 6 + 115148730 GGAAGA i nomLeu3.chr7b C 0 T 52 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187987957 15 + 189454096 I e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2485.000000 s hg38.chr4_KI270789v1_alt 168798 8 + 205944 TAAAGGTT s panTro5.chr4 192954993 8 + 194502333 CAAAGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838317 8 + 195804263 TATAGGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872830 8 + 4876863 CAAAGGTC i gorGor5.CYUI01015356v1 C 0 I 798 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187987957 15 + 189454096 I e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112762068 52 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=546.000000 s hg38.chr4_KI270789v1_alt 168806 2 + 205944 TT s panTro5.chr4 192955001 2 + 194502333 TT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838325 2 + 195804263 TT i panPan2.chr4 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187987957 15 + 189454096 I e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112762068 52 + 115148730 T e gorGor5.CYUI01015356v1 3872838 798 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=600.000000 s hg38.chr4_KI270789v1_alt 168808 1 + 205944 G s panTro5.chr4 192955003 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838327 1 + 195804263 G i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762016 1 + 115148730 G i nomLeu3.chr7b T 52 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187987957 15 + 189454096 I e rheMac8.chr5 189045130 114 + 190429646 T e gorGor5.CYUI01015356v1 3872838 798 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=-1107.000000 s hg38.chr4_KI270789v1_alt 168809 1 + 205944 -T s panTro5.chr4 192955004 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838328 1 + 195804263 -T i panPan2.chr4 C 0 C 0 s macFas5.chr5 187987972 1 + 189454096 G- i macFas5.chr5 I 15 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112762017 0 + 115148730 C e gorGor5.CYUI01015356v1 3872838 798 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=44029.000000 s hg38.chr4_KI270789v1_alt 168810 36 + 205944 TAGATTACCTGATATCCAAATAGGAGATAATAGCAT s panTro5.chr4 192955005 36 + 194502333 TAGATTACCTGATGTCCAAGTAGGAGATAATAGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838329 36 + 195804263 TACATTACCTGATATCCAAATAGGAGGTAATAGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873636 36 + 4876863 TAGATTACCTGATGTCCAAGTAGGAGGTAATAGCAT i gorGor5.CYUI01015356v1 I 798 C 0 s nomLeu3.chr7b 112762017 36 + 115148730 TAGATTACATGATGTCCAAGTAGGAGGTAATAGCAT i nomLeu3.chr7b C 0 T 223 s macFas5.chr5 187987973 36 + 189454096 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8676.000000 s hg38.chr4_KI270789v1_alt 168846 11 + 205944 AAGGTCCTCGA s panTro5.chr4 192955041 11 + 194502333 AAGGTCCTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838365 11 + 195804263 AAGGTCCTCGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873672 11 + 4876863 AAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988009 11 + 189454096 AAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112762053 223 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8036.000000 s hg38.chr4_KI270789v1_alt 168857 10 + 205944 AGACAAAGGT s panTro5.chr4 192955052 10 + 194502333 AGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838376 10 + 195804263 AGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873683 10 + 4876863 AGACAAAAGT i gorGor5.CYUI01015356v1 C 0 T 852 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112762053 223 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=55823.000000 s hg38.chr4_KI270789v1_alt 168867 55 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC------------------------------------------------------------TGGAAGAC s panTro5.chr4 192955062 115 + 194502333 GTTGTAGATTACCTGATATCCAAATAGGAGGTGATAGCATAAGGTCCTGTGATACAGGGTGTTGTAGAATACCTGATGTCCAAATAGGAGGAAATGGCATAAGATCATGAAAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838386 55 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC------------------------------------------------------------TGGAAGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872841 55 + 4876863 GTTGTAGTTTACCTGATGTTCAAATAGGAGGTAATAGCATAAGGTCC------------------------------------------------------------TGGAATAC i gorGor5.CYUI01015356v1 T 852 C 0 s nomLeu3.chr7b 112761830 55 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCC------------------------------------------------------------TGGAAGAC i nomLeu3.chr7b T 223 T 654 s macFas5.chr5 187987909 55 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC------------------------------------------------------------TGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3483.000000 s hg38.chr4_KI270789v1_alt 168922 5 + 205944 AAAGG s panTro5.chr4 192955177 5 + 194502333 AGAGG i panTro5.chr4 C 0 I 1573 s panPan2.chr4 192838441 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872896 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987964 5 + 189454096 AGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112761885 654 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 168927 1 + 205944 T s panTro5.chr4 192956755 1 + 194502333 T i panTro5.chr4 I 1573 C 0 s panPan2.chr4 192838446 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872901 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e nomLeu3.chr7b 112761885 654 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=11350.000000 s hg38.chr4_KI270789v1_alt 168928 10 + 205944 GTTGTAGATT s panTro5.chr4 192956756 10 + 194502333 GTTGTAGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838447 10 + 195804263 GTTGTAGATT i panPan2.chr4 C 0 I 2447 s gorGor5.CYUI01015356v1 3872902 10 + 4876863 GTTGTAGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761231 10 + 115148730 GCTGTAGATG i nomLeu3.chr7b T 654 C 0 s macFas5.chr5 187987909 10 + 189454096 GTTGTAGATT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8595.000000 s hg38.chr4_KI270789v1_alt 168938 6 + 205944 ACCTGA s panTro5.chr4 192956766 6 + 194502333 ACCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840904 6 + 195804263 ACCTGA i panPan2.chr4 I 2447 C 0 s gorGor5.CYUI01015356v1 3872912 6 + 4876863 ACCTGA i gorGor5.CYUI01015356v1 C 0 I 852 s nomLeu3.chr7b 112761241 6 + 115148730 ACCTGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987919 6 + 189454096 ACCTGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=45536.000000 s hg38.chr4_KI270789v1_alt 168944 41 + 205944 GTTCCAAATAGGAGTTAATAGCATAAGGTCCTGGA--AGAGAG s panTro5.chr4 192956772 43 + 194502333 TGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840910 41 + 195804263 TGTCCAAATAGGAGCTAATAGCATAAGGTCCTGGA--AGAGAG i panPan2.chr4 C 0 T 1965 s gorGor5.CYUI01015356v1 3873770 41 + 4876863 TGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA--AGAGAG i gorGor5.CYUI01015356v1 I 852 C 0 s nomLeu3.chr7b 112761247 41 + 115148730 TGTCCAAGTAGGAGGTAATAGCATAAGCTCCTGGA--AGAGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987925 41 + 189454096 TGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA--AGAGAG i macFas5.chr5 C 0 I 4 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2000.000000 s hg38.chr4_KI270789v1_alt 168985 2 + 205944 GG s panTro5.chr4 192956815 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838986 2 + 195804263 GG i panPan2.chr4 T 1965 C 0 s gorGor5.CYUI01015356v1 3873811 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761288 2 + 115148730 GG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187987966 4 + 189454096 I e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=17925.000000 s hg38.chr4_KI270789v1_alt 168987 15 + 205944 CAGTAGATTACCTGA s panTro5.chr4 192956817 15 + 194502333 CTGTAGATTACCTGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838988 15 + 195804263 CTGTAGATTACCTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873813 15 + 4876863 CTGTAGCTTACCTGG i gorGor5.CYUI01015356v1 C 0 T 910 s nomLeu3.chr7b 112761290 15 + 115148730 CTGTAGATTACCTGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987970 15 + 189454096 TTGTAGATTACCTGA i macFas5.chr5 I 4 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=36793.000000 s hg38.chr4_KI270789v1_alt 169002 31 + 205944 TGTCCAAATAGGAGGTAATAGCATAAGGTCC s panTro5.chr4 192956832 31 + 194502333 TATCCAAAAAGGAGGTAATACCATAAGGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839003 31 + 195804263 TATCCAAATAGGAGGTAATAGCATAAGGTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872918 31 + 4876863 TGTCCAAATAAGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 T 910 C 0 s nomLeu3.chr7b 112761305 31 + 115148730 TGTGCAAATAGGAGGTAATAGCATAAGGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987985 31 + 189454096 TGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 T 57 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=-2518.000000 s hg38.chr4_KI270789v1_alt 169033 4 + 205944 TT--GT s panTro5.chr4 192956863 3 + 194502333 TG--G- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839034 3 + 195804263 TG--G- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872949 5 + 4876863 TGCAG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761336 3 + 115148730 CG--A- i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e macFas5.chr5 187988016 57 + 189454096 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=22526.000000 s hg38.chr4_KI270789v1_alt 169037 23 + 205944 AAGAGAGAGG--GTTGTAGATTACA s panTro5.chr4 192956866 21 + 194502333 --AAGAGAGG--GTTGTAGATTACG i panTro5.chr4 C 0 I 61 s panPan2.chr4 192839037 21 + 195804263 --AAGAGAGG--GTTGTAGATTACG i panPan2.chr4 C 0 I 120 s gorGor5.CYUI01015356v1 3872954 21 + 4876863 --GAGAGAGG--GTTGTAGATTACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761339 23 + 115148730 --AAGAGAGGGAGTTGTACATTACA i nomLeu3.chr7b C 0 I 58 s macFas5.chr5 187987959 23 + 189454096 AAGAGAGAAG--GTTGTAGATTACC i macFas5.chr5 T 57 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=38889.000000 s hg38.chr4_KI270789v1_alt 169060 38 + 205944 TGATTTCTAAATAGGGGGTAATAGCATAATATCCTGGA s panTro5.chr4 192956948 38 + 194502333 TGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 I 61 C 0 s panPan2.chr4 192839178 37 + 195804263 CGATTTCC-AATAGGAGGTAATAGCATAAGATCCTGCA i panPan2.chr4 I 120 C 0 s gorGor5.CYUI01015356v1 3872975 38 + 4876863 TGATTTCTAAATAGGGGGTAATAGCCTAACGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761420 38 + 115148730 TGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTGGA i nomLeu3.chr7b I 58 C 0 s macFas5.chr5 187987982 38 + 189454096 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3930.000000 s hg38.chr4_KI270789v1_alt 169098 4 + 205944 AGAC s panTro5.chr4 192956986 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839215 4 + 195804263 AGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873013 4 + 4876863 AGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 4 + 115148730 AGAC i nomLeu3.chr7b C 0 T 168 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 234 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365838 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379343 114 - 25927173 T e rheMac8.chr5 189045130 114 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=16052.000000 s hg38.chr4_KI270789v1_alt 169102 5 + 205944 AAAGG s panTro5.chr4 192956990 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839219 5 + 195804263 AGAGG i panPan2.chr4 C 0 T 4192 s gorGor5.CYUI01015356v1 3873017 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045016 5 + 190429646 AAAGG i rheMac8.chr5 T 114 C 0 s macFas5.chr5 187987903 5 + 189454096 AAAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 5 - 25927173 AAAGG i macNem1.NW_012013133v1 T 114 C 0 s chlSab2.chr7 134365724 5 + 135778131 AAAGG i chlSab2.chr7 T 114 C 0 s colAng1.NW_012116221v1 929669 5 + 2368649 AAAGG i colAng1.NW_012116221v1 T 234 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761462 168 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2548.000000 s hg38.chr4_KI270789v1_alt 169107 1 + 205944 T s panTro5.chr4 192956995 1 + 194502333 T i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873022 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045021 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379234 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365729 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929674 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761462 168 + 115148730 T e panPan2.chr4 192839224 4192 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=14859.000000 s hg38.chr4_KI270789v1_alt 169108 5 + 205944 GTTGC s panTro5.chr4 192956996 5 + 194502333 GTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835032 5 + 195804263 GTTGC i panPan2.chr4 T 4192 C 0 s gorGor5.CYUI01015356v1 3873023 5 + 4876863 GTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045022 5 + 190429646 GTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 5 + 189454096 GTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 5 - 25927173 GTTGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 5 + 135778131 GTTGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929675 5 + 2368649 GTTGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761462 168 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=188863.000000 s hg38.chr4_KI270789v1_alt 169113 55 + 205944 AGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAAAGAGG s panTro5.chr4 192957001 55 + 194502333 AGATTACCTGATGTCCAAATAGGAGGTCATAGCATAAGGTGCTGGAAGAGAGACG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835037 55 + 195804263 GGATTACCTGATGTCCAAATAGGACAAAATAGCATAAGGTCCTGGAAGAAAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873028 55 + 4876863 AGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATAGAAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 T 1814 s nomLeu3.chr7b 112761294 55 + 115148730 AGATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCCGAAAGAGAGGGA i nomLeu3.chr7b T 168 C 0 s rheMac8.chr5 189045027 55 + 190429646 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987914 55 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379240 55 - 25927173 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365735 55 + 135778131 AGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929680 55 + 2368649 AGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=192498.000000 s hg38.chr4_KI270789v1_alt 169168 54 + 205944 GTAGTACATTACCGGATGTCCAAATAGGAAGTAATAGCATAAGGTCCTGGAAGA s panTro5.chr4 192957056 54 + 194502333 GCTGTAGATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835092 54 + 195804263 GTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871269 54 + 4876863 GTAGTAGATTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAAA i gorGor5.CYUI01015356v1 T 1814 C 0 s nomLeu3.chr7b 112761349 54 + 115148730 GTTGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 54 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987969 54 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24379295 54 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365790 54 + 135778131 GTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 I 1 s colAng1.NW_012116221v1 929735 54 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-350.000000 s hg38.chr4_KI270789v1_alt 169222 1 + 205944 C s panTro5.chr4 192957110 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835146 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871323 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761403 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929789 120 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 1 + 135778131 I e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187988023 1 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7468.000000 s hg38.chr4_KI270789v1_alt 169223 3 + 205944 AAA s panTro5.chr4 192957111 3 + 194502333 AGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835147 3 + 195804263 AAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871324 3 + 4876863 AAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761404 3 + 115148730 AGG i nomLeu3.chr7b C 0 I 360 s rheMac8.chr5 189045016 3 + 190429646 AAA i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187988024 3 + 189454096 AGA i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24379229 3 - 25927173 AAA i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365845 3 + 135778131 AGA i chlSab2.chr7 I 1 C 0 s colAng1.NW_012116221v1 929669 3 + 2368649 AAA i colAng1.NW_012116221v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4230.000000 s hg38.chr4_KI270789v1_alt 169226 2 + 205944 GG s panTro5.chr4 192957114 1 + 194502333 G- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835150 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871327 2 + 4876863 GG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761767 2 + 115148730 GG i nomLeu3.chr7b I 360 C 0 s rheMac8.chr5 189045019 2 + 190429646 GG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988027 2 + 189454096 GG i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379232 2 - 25927173 GG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365848 2 + 135778131 GG i chlSab2.chr7 C 0 T 91 s colAng1.NW_012116221v1 929672 2 + 2368649 GG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=70504.000000 s hg38.chr4_KI270789v1_alt 169228 27 + 205944 TCTTGTAGACTACCTGATGTCC-AAATA s panTro5.chr4 192957115 25 + 194502333 --TTGTAGATTACGTGATGTCC-AAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835152 28 + 195804263 TCTTGTAGACTACCTGATGTCCAAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871329 27 + 4876863 TCTTGTAGACTACCTGATGTCC-AAATA i gorGor5.CYUI01015356v1 C 0 T 412 s nomLeu3.chr7b 112761769 27 + 115148730 TGTTGTAGATGACCTGATGTCC-AAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045021 27 + 190429646 TGTTGTAGATTACCTGATGTCC-ACGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987908 27 + 189454096 TGTTGTAGATTACCTGATGTCC-ACGTA i macFas5.chr5 T 121 C 0 s macNem1.NW_012013133v1 24379234 27 - 25927173 TGTTGTAGATTACCTGATGTCC-ACGTA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929674 27 + 2368649 TGTTGTAGATTACCTGATGTCC-ACGTA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=18969.000000 s hg38.chr4_KI270789v1_alt 169255 9 + 205944 GGAGGTAAT s panTro5.chr4 192957140 9 + 194502333 GGAGGTAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835180 9 + 195804263 GGATGTAAT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761796 9 + 115148730 GGAGGTAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045048 9 + 190429646 GGAGGTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987935 9 + 189454096 GGAGGTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379261 9 - 25927173 GGAGGTGAT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929701 9 + 2368649 GGAGCTGAT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3871356 412 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=62187.000000 s hg38.chr4_KI270789v1_alt 169264 25 + 205944 CACATAAGGTTCTGGAACAGAGAGG s panTro5.chr4 192957149 25 + 194502333 AGCATAAGGTGCTGGTAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835189 25 + 195804263 CGCATAAGGTTCTGGAACAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870944 25 + 4876863 GGCGTAAGGGCATGGAAGAGAGAGG i gorGor5.CYUI01015356v1 T 412 C 0 s nomLeu3.chr7b 112761805 25 + 115148730 AGCATAAAGTCCTTGGAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045057 25 + 190429646 AGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187987944 25 + 189454096 AGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379270 25 - 25927173 AGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 T 60 s colAng1.NW_012116221v1 929710 25 + 2368649 AGCGTAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=147146.000000 s hg38.chr4_KI270789v1_alt 169289 54 + 205944 GTTGTATACTACCTGATGTCCAAATAGGAAGTAAGAGCATAAGGTCCGGGAAGA s panTro5.chr4 192957174 54 + 194502333 GCTGTAGATTACTTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835214 54 + 195804263 GTTGCATATTACCTGATGTCCAAATAGCAGGTAAGAGCATAAGGTCCGGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870969 54 + 4876863 GCACTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGTTCCTGGAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761830 54 + 115148730 GTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGAAGA i nomLeu3.chr7b C 0 T 181 s rheMac8.chr5 189045022 54 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987969 54 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 54 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 T 60 C 0 s colAng1.NW_012116221v1 929735 54 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=14745.000000 s hg38.chr4_KI270789v1_alt 169343 6 + 205944 GAGAGG s panTro5.chr4 192957228 6 + 194502333 GAGAGG i panTro5.chr4 C 0 T 1690 s panPan2.chr4 192835268 6 + 195804263 GAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871023 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 I 362 s nomLeu3.chr7b 112761703 6 + 115148730 GAGACG i nomLeu3.chr7b T 181 C 0 s rheMac8.chr5 189045076 6 + 190429646 GAGAAG i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379289 6 - 25927173 GAGAAG i macNem1.NW_012013133v1 C 0 T 60 s colAng1.NW_012116221v1 929789 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=2919.000000 s hg38.chr4_KI270789v1_alt 169349 2 + 205944 GT s panTro5.chr4 192955544 2 + 194502333 CT i panTro5.chr4 T 1690 C 0 s panPan2.chr4 192835274 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761709 2 + 115148730 GC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 2 + 190429646 GT i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187988029 2 + 189454096 GT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379235 2 - 25927173 GT i macNem1.NW_012013133v1 T 60 C 0 s colAng1.NW_012116221v1 929675 2 + 2368649 GT i colAng1.NW_012116221v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3871029 362 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=120412.000000 s hg38.chr4_KI270789v1_alt 169351 58 + 205944 TGTAGATTATCCGGTGTCCAAGTAGGCGGTAATCGCATAAGGTCCTGGAAGAGAGAGG s panTro5.chr4 192955546 58 + 194502333 TGTAGACTACCTGATGTCCAAATAGGAGGTAATCGCATAAGGTTCTGGAACAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835276 58 + 195804263 TGTAGATTACCTGATGTCCAAGTAGGTGGTAATTGCATAAGGTCCTGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761711 58 + 115148730 TGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAAAGACAAAGG i nomLeu3.chr7b C 0 T 102 s rheMac8.chr5 189045024 58 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987971 58 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379237 58 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929677 58 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3871029 362 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3773.000000 s hg38.chr4_KI270789v1_alt 169409 2 + 205944 GT s panTro5.chr4 192955604 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835334 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871391 2 + 4876863 CT i gorGor5.CYUI01015356v1 I 362 C 0 s rheMac8.chr5 189045082 2 + 190429646 GT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988029 2 + 189454096 GT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379295 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929735 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 102 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=24059.000000 s hg38.chr4_KI270789v1_alt 169411 12 + 205944 TGCAGATGACCT s panTro5.chr4 192955606 12 + 194502333 TGTATACTACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192835336 12 + 195804263 TGTAGATGACCT i panPan2.chr4 C 0 I 3183 s gorGor5.CYUI01015356v1 3871393 12 + 4876863 TGTACACTACCT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045084 12 + 190429646 TGTAGATTACCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987971 12 + 189454096 TGTAGATTACCT i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379297 12 - 25927173 TGTAGATTACCT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929737 12 + 2368649 TGTAGATTACCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 102 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8022.000000 s hg38.chr4_KI270789v1_alt 169423 4 + 205944 GATG s panTro5.chr4 192955618 4 + 194502333 GATG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871405 4 + 4876863 GATG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045096 4 + 190429646 GATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987983 4 + 189454096 GATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379309 4 - 25927173 GATG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929749 4 + 2368649 GATG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761769 102 + 115148730 T e panPan2.chr4 192835348 3183 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=88470.000000 s hg38.chr4_KI270789v1_alt 169427 42 + 205944 TCCAAATAGGAAGTAAGAGCATAAGGTCCGGGAAGAGAGAGG s panTro5.chr4 192955622 42 + 194502333 TCCAAATAGGAAGTAAGAGCATAAGGTCCGGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871409 42 + 4876863 TCCAAATAGGATGTAATCGCATAAGGTTCTGGAACAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761667 42 + 115148730 TCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAGAGACG i nomLeu3.chr7b T 102 I 61 s rheMac8.chr5 189045100 42 + 190429646 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987987 42 + 189454096 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379313 42 - 25927173 TCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929753 42 + 2368649 TCCACGTAGGAGCTGATAGCATAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192835348 3183 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=5348.000000 s hg38.chr4_KI270789v1_alt 169469 2 + 205944 GT s panTro5.chr4 192955664 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871451 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761770 2 + 115148730 GT i nomLeu3.chr7b I 61 C 0 s rheMac8.chr5 189045142 2 + 190429646 GT i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988029 2 + 189454096 GT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379355 2 - 25927173 GT i macNem1.NW_012013133v1 C 0 T 120 s colAng1.NW_012116221v1 929795 2 + 2368649 GT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192835348 3183 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=49906.000000 s hg38.chr4_KI270789v1_alt 169471 23 + 205944 TGTAGATTATCCGGTGTCCAAGT s panTro5.chr4 192955666 23 + 194502333 TGTAGATTACCCGATGTCCAAGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871453 23 + 4876863 TGTATATTACCTGATGTCCAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761772 23 + 115148730 TGTAGATGACCTGATGTCCAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045024 23 + 190429646 TGTAGATTACCTGATGTCCACGT i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987971 23 + 189454096 TGTAGATTACCTGATGTCCACGT i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379237 23 - 25927173 TGTAGATTACCTGATGTCCACGT i macNem1.NW_012013133v1 T 120 C 0 s colAng1.NW_012116221v1 929797 23 + 2368649 TGTAGATTACCTGATGTCCACGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192835348 3183 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=9091.000000 s hg38.chr4_KI270789v1_alt 169494 4 + 205944 AGGC s panTro5.chr4 192955689 4 + 194502333 AGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838531 4 + 195804263 AGGA i panPan2.chr4 I 3183 C 0 s gorGor5.CYUI01015356v1 3871476 4 + 4876863 AGCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761795 4 + 115148730 AGGA i nomLeu3.chr7b C 0 T 302 s rheMac8.chr5 189045047 4 + 190429646 AGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987994 4 + 189454096 AGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379260 4 - 25927173 AGGA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929820 4 + 2368649 AGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 91 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=123404.000000 s hg38.chr4_KI270789v1_alt 169498 33 + 205944 GGTAATCGCATAAGGTCCTGGAAGACAGAGGGT s panTro5.chr4 192955693 33 + 194502333 GGTAATCGCATAAGGTCCTGGAAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838535 33 + 195804263 GGTAATACCATAAGGTCCTGGAAGAGAGAGGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871480 33 + 4876863 GGTAAGAACATAAGGTCCTGGAAGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761497 33 + 115148730 GGTAATAGCATAAGGTCCTGGAAGAGAGAGGGT i nomLeu3.chr7b T 302 C 0 s rheMac8.chr5 189045051 33 + 190429646 GGTGATAGCATAAGGTCCTGGAAGAGAGAAGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987998 33 + 189454096 GGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379264 33 - 25927173 GGTGATAGCATAAGGTCCTGGAAGAGAGAAGGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365759 33 + 135778131 GGTGATAGCGTAAGGTCCTGGACGAGAGAGGGT i chlSab2.chr7 T 91 C 0 s colAng1.NW_012116221v1 929824 33 + 2368649 GGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=24818.000000 s hg38.chr4_KI270789v1_alt 169531 8 + 205944 TGCAGATG s panTro5.chr4 192955726 8 + 194502333 TGCAGATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838568 8 + 195804263 TGTGGATT i panPan2.chr4 C 0 T 119 s gorGor5.CYUI01015356v1 3871513 8 + 4876863 TGTAGATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761530 8 + 115148730 TGTGGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045084 8 + 190429646 TGTAGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987971 8 + 189454096 TGTAGATT i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379297 8 - 25927173 TGTAGATT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365792 8 + 135778131 TGTAGATT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929857 8 + 2368649 TGTAGATT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=166617.000000 s hg38.chr4_KI270789v1_alt 169539 44 + 205944 ACCTGATGTCCAAATGGGAGGTAATAGCATAAGGTCCTGGAAGA s panTro5.chr4 192955734 44 + 194502333 ACCTGATGTCCAAATGGGAGGTGATAGCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838457 44 + 195804263 ACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGA i panPan2.chr4 T 119 I 119 s gorGor5.CYUI01015356v1 3871521 44 + 4876863 ACCTGATGTCCAAATGGGAGGTAATAGCATAAGATCCTGGAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761538 44 + 115148730 ACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045092 44 + 190429646 ACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987979 44 + 189454096 ACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379305 44 - 25927173 ACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365800 44 + 135778131 ACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929865 44 + 2368649 ACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 T 224 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=9246.000000 s hg38.chr4_KI270789v1_alt 169583 6 + 205944 CAAAGG s panTro5.chr4 192955778 6 + 194502333 CAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838620 6 + 195804263 CAAAGG i panPan2.chr4 I 119 C 0 s gorGor5.CYUI01015356v1 3871565 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761582 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s chlSab2.chr7 134365844 6 + 135778131 CAGAGG i chlSab2.chr7 C 0 T 126 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=71944.000000 s hg38.chr4_KI270789v1_alt 169589 61 + 205944 TGTTGTAGATTACCTGAAGTCCAAATAGGAGGTAATAGCATAAGGTCCTCGAAAACAAAGG s panTro5.chr4 192955784 61 + 194502333 TGTTGTAGATTACCTGAAGTCCAAATAGGAAGTAATAGCATAAGGTCCTCGAAAACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838626 61 + 195804263 TGTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATAGCATAAGGTCCTCGAAAACAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871571 61 + 4876863 TGTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATGGCGTAAGGTCCTCGAAAACAAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 61 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGAAGACAGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 61 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 T 121 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=59562.000000 s hg38.chr4_KI270789v1_alt 169650 52 + 205944 TGTTGGAGATTACCTGATGTCCAAATAGCAGGAAATAGCATAAGGTCCTGGA s panTro5.chr4 192955845 52 + 194502333 TGTTGGAGATTACCTGATGTCCAAATAGCAGGAAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838687 52 + 195804263 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871632 49 + 4876863 TGTTGTAGATTACCTGATGTCCAAAT---AGGAAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761649 51 + 115148730 -GCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8708.000000 s hg38.chr4_KI270789v1_alt 169702 9 + 205944 AGACAAAGG s panTro5.chr4 192955897 9 + 194502333 AGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838739 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 T 122 s gorGor5.CYUI01015356v1 3871681 9 + 4876863 AGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761700 9 + 115148730 AGAGAGACG i nomLeu3.chr7b C 0 T 302 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 169711 1 + 205944 T s panTro5.chr4 192955906 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838626 1 + 195804263 T i panPan2.chr4 T 122 C 0 s gorGor5.CYUI01015356v1 3871690 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 I 1392 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761709 302 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=60971.000000 s hg38.chr4_KI270789v1_alt 169712 51 + 205944 GTTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAATGTCCTGGA s panTro5.chr4 192955907 51 + 194502333 GTTGTAGATTACCTGATGCCCAAATAGAAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838627 51 + 195804263 GTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATAGCATAAGGTCCTCGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873083 51 + 4876863 GTTGTAGATTACCTGATGTCCAAAGAGGAGGGAATAGCATAAAGTCCTGGA i gorGor5.CYUI01015356v1 I 1392 C 0 s nomLeu3.chr7b 112761407 51 + 115148730 GCTGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTGGA i nomLeu3.chr7b T 302 C 0 s macFas5.chr5 187987909 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=12410.000000 s hg38.chr4_KI270789v1_alt 169763 10 + 205944 AGACAAAGGT s panTro5.chr4 192955958 10 + 194502333 AGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838678 10 + 195804263 AAACAAAGGT i panPan2.chr4 C 0 I 60 s gorGor5.CYUI01015356v1 3873134 10 + 4876863 AGACAAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 10 + 115148730 AGACAAAGGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=69461.000000 s hg38.chr4_KI270789v1_alt 169773 60 + 205944 GTTGTAGATTACTTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAGG s panTro5.chr4 192955968 60 + 194502333 ATTGTAGATTACTTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838748 57 + 195804263 GCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCCTGGAAGAGA---G i panPan2.chr4 I 60 C 0 s gorGor5.CYUI01015356v1 3873144 60 + 4876863 GTTGTAGATTACCTGACGTCCAAATAGAAGGTAATAGCATAAGGTCCTGGAAGACAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761468 60 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 60 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=61093.000000 s hg38.chr4_KI270789v1_alt 169833 55 + 205944 TGTTGTAGATTACCTGATGTCTAAATAGGAGGAAATAGCATAAGGTCCTGGAGGA s panTro5.chr4 192956028 55 + 194502333 TGTTGTAGATTACCTGATGTCTAAATAGGAAGTAATAGCATAAGGTCCTGGGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838805 55 + 195804263 GGTTGTAGATTACGTGATGTCCAATTAGGAGGTAATAGCATAAGGTCCTCGACGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873204 55 + 4876863 TGTTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGCCATGGAAGA i gorGor5.CYUI01015356v1 C 0 I 366 s nomLeu3.chr7b 112761528 54 + 115148730 -GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 55 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5803.000000 s hg38.chr4_KI270789v1_alt 169888 6 + 205944 CAAAGG s panTro5.chr4 192956083 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838860 6 + 195804263 CAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873625 6 + 4876863 CAAAAG i gorGor5.CYUI01015356v1 I 366 C 0 s nomLeu3.chr7b 112761582 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987963 6 + 189454096 GAGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=422.000000 s hg38.chr4_KI270789v1_alt 169894 1 + 205944 T s panTro5.chr4 192956089 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838866 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873631 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987969 0 + 189454096 C e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=64882.000000 s hg38.chr4_KI270789v1_alt 169895 51 + 205944 GTTGTAGATTACATGATGTCCAAATAGGACGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192956090 51 + 194502333 GTTGTAGATTACATGATGTCCAAATAGGACGTAATAGCGTAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838867 51 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873632 51 + 4876863 GTTGTAGATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761589 51 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4605.000000 s hg38.chr4_KI270789v1_alt 169946 4 + 205944 AGAC s panTro5.chr4 192956141 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838918 4 + 195804263 AGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873683 4 + 4876863 AGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761640 4 + 115148730 AGAC i nomLeu3.chr7b C 0 T 282 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=16540.000000 s hg38.chr4_KI270789v1_alt 169950 19 + 205944 AAAGTTGTTGTAGATTACC s panTro5.chr4 192956145 19 + 194502333 AAAGGTGTTGTAGATTACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838922 19 + 195804263 AAAGGTGTTGTAGATTACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873687 19 + 4876863 AAAAGTGTTGTAGATTACC i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987903 19 + 189454096 AAAGGTGTTGTAGATTACC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761644 282 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=37445.000000 s hg38.chr4_KI270789v1_alt 169969 34 + 205944 TGATGTCCAAATAGGAGGTAATAGAATAAGGTCC s panTro5.chr4 192956164 34 + 194502333 TGATATCCAAATAGGAGGTAATAGAATAAGGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838941 33 + 195804263 TGATGTCCAAATAGGAGGTCATAG-ATAAGGTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873706 34 + 4876863 TGATTTCCAAATAGGAGGTAATAGCAGAAGGTCC i gorGor5.CYUI01015356v1 C 0 I 253 s nomLeu3.chr7b 112761362 34 + 115148730 TGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i nomLeu3.chr7b T 282 C 0 s macFas5.chr5 187987922 34 + 189454096 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9550.000000 s hg38.chr4_KI270789v1_alt 170003 10 + 205944 TGGAAGAGAG s panTro5.chr4 192956198 10 + 194502333 TGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838974 10 + 195804263 TGGAAGAGAG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761396 10 + 115148730 TGGAAGAGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987956 10 + 189454096 TGGAAGAGAG i macFas5.chr5 C 0 I 4 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873740 253 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1020.000000 s hg38.chr4_KI270789v1_alt 170013 2 + 205944 --GG s panTro5.chr4 192956208 2 + 194502333 --GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838984 4 + 195804263 ACGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761406 2 + 115148730 --GG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987966 4 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873740 253 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=476.000000 s hg38.chr4_KI270789v1_alt 170015 1 + 205944 C s panTro5.chr4 192956210 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838988 1 + 195804263 C i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761408 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987970 1 + 189454096 T i macFas5.chr5 I 4 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3873740 253 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=31758.000000 s hg38.chr4_KI270789v1_alt 170016 26 + 205944 TGTAAATTACCTGATGTCCAAATAGG s panTro5.chr4 192956211 26 + 194502333 TGTAAATTACCTGATGTCCAAATAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838989 26 + 195804263 TGTAGATTACCTGATATCCAAATAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873993 26 + 4876863 TGTAGATTACCTCATGTCCAAATGGG i gorGor5.CYUI01015356v1 I 253 C 0 s nomLeu3.chr7b 112761409 26 + 115148730 TGTAGATTACCTGATGTCCAAATAGG i nomLeu3.chr7b C 0 T 275 s macFas5.chr5 187987971 26 + 189454096 TGTAGATTACCTGATGTCCACGTAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 170042 1 + 205944 A s panTro5.chr4 192956237 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839015 1 + 195804263 A i panPan2.chr4 C 0 T 515 s gorGor5.CYUI01015356v1 3874019 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987997 1 + 189454096 A i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761435 275 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2163.000000 s hg38.chr4_KI270789v1_alt 170043 7 + 205944 GGTAATA s panTro5.chr4 192956238 7 + 194502333 GGTAATA i panTro5.chr4 C 0 I 1763 s gorGor5.CYUI01015356v1 3874020 7 + 4876863 AGAAATG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987998 7 + 189454096 GGTGATA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761435 275 + 115148730 T e panPan2.chr4 192839016 515 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2327.000000 s hg38.chr4_KI270789v1_alt 170050 11 + 205944 GAATCAGGTCC s gorGor5.CYUI01015356v1 3874027 11 + 4876863 GCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988005 11 + 189454096 GCATAAGGTCC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112761435 275 + 115148730 T e panPan2.chr4 192839016 515 + 195804263 T e panTro5.chr4 192956245 1763 + 194502333 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1146.000000 s hg38.chr4_KI270789v1_alt 170061 2 + 205944 TG s gorGor5.CYUI01015356v1 3874038 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761160 2 + 115148730 TG i nomLeu3.chr7b T 275 C 0 s macFas5.chr5 187988016 2 + 189454096 TG i macFas5.chr5 C 0 T 118 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e panPan2.chr4 192839016 515 + 195804263 T e panTro5.chr4 192956245 1763 + 194502333 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1213.000000 s hg38.chr4_KI270789v1_alt 170063 3 + 205944 GAG s gorGor5.CYUI01015356v1 3874040 3 + 4876863 GAA i gorGor5.CYUI01015356v1 C 0 T 237 s nomLeu3.chr7b 112761162 3 + 115148730 GAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987900 3 + 189454096 GAG i macFas5.chr5 T 118 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e panPan2.chr4 192839016 515 + 195804263 T e panTro5.chr4 192956245 1763 + 194502333 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=46422.000000 s hg38.chr4_KI270789v1_alt 170066 42 + 205944 GAGAGGGCTGTAGATTACCTGATGTCCAAATAGGAGGTAATA s panTro5.chr4 192958008 42 + 194502333 GAGAGGGCTGTAGATTACCTCATGTCCATATAGGAGGTAATA i panTro5.chr4 I 1763 T 1805 s panPan2.chr4 192838501 41 + 195804263 GAGAGGGCTGTAGATTACCTGATGTCCAAA-AGGAGGTAATA i panPan2.chr4 T 515 C 0 s gorGor5.CYUI01015356v1 3873806 42 + 4876863 GAGAGGGCTGTAGCTTACCTGGTGTCCAAATAGGAGGTAATA i gorGor5.CYUI01015356v1 T 237 C 0 s nomLeu3.chr7b 112761165 42 + 115148730 GAGAAGGCTGTAGATTACCTGATGTTCAAATAGGAGGTAATA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987903 42 + 189454096 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19925.000000 s hg38.chr4_KI270789v1_alt 170108 19 + 205944 TCATAAGGTGCTGGAAGAG s panTro5.chr4 192956245 19 + 194502333 TCATAAGGTGCTGGAAGAG i panTro5.chr4 T 1805 C 0 s panPan2.chr4 192838542 19 + 195804263 CCATAAGGTCCTGGAAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873848 19 + 4876863 TCATAAGGTGCTGGAAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761207 19 + 115148730 GCATAAGATACAAGAAGAG i nomLeu3.chr7b C 0 I 418 s macFas5.chr5 187987945 19 + 189454096 GCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6575.000000 s hg38.chr4_KI270789v1_alt 170127 5 + 205944 AGAGG s panTro5.chr4 192956264 5 + 194502333 AGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838561 5 + 195804263 AGAGG i panPan2.chr4 C 0 T 608 s gorGor5.CYUI01015356v1 3873867 5 + 4876863 AGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761644 5 + 115148730 AGAGG i nomLeu3.chr7b I 418 C 0 s macFas5.chr5 187987964 5 + 189454096 AGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=6341.000000 s hg38.chr4_KI270789v1_alt 170132 10 + 205944 GCTTAAAATA s panTro5.chr4 192956269 10 + 194502333 GATTTAGATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837958 10 + 195804263 GCTTAAGATA i panPan2.chr4 T 608 C 0 s gorGor5.CYUI01015356v1 3873872 10 + 4876863 GCTGTAGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761649 10 + 115148730 GCTGTAGATT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 10 + 189454096 GTTGTAGATT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 224 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=20871.000000 s hg38.chr4_KI270789v1_alt 170142 11 + 205944 ACCTGATGTCC s panTro5.chr4 192956279 11 + 194502333 ACCTGATGTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837968 11 + 195804263 ACCTGATGTCC i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3873882 11 + 4876863 ACCTGATGTCC i gorGor5.CYUI01015356v1 C 0 T 1399 s nomLeu3.chr7b 112761659 11 + 115148730 ACATGATGTCC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987979 11 + 189454096 ACCTGATGTCC i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929685 11 + 2368649 ACCTGATGTCC i colAng1.NW_012116221v1 T 224 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=62898.000000 s hg38.chr4_KI270789v1_alt 170153 38 + 205944 AAGTAGG-AGGTAATAGCATAAGGTCTTGGAAGAGAGAG s panTro5.chr4 192956290 38 + 194502333 AAGTAGG-AGGTAATAGCATAAGGTCTTGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192837980 39 + 195804263 AAGTAGGAAGGTAATAGCATAAGGTCTTGGAAGAGAGAG i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3872494 38 + 4876863 AAGTAGG-AGGTAATAGCATAAGGTCCTGGAAGAGAGAG i gorGor5.CYUI01015356v1 T 1399 C 0 s nomLeu3.chr7b 112761670 38 + 115148730 AAATAGG-AGGAAATAGCATAAGGTCCTGGAAGAGAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987990 38 + 189454096 ACGTAGG-AGGTGATAGCATAAGGTCCTGGAAGAGAGAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929696 38 + 2368649 ACGTAGG-AGCTGATAGCGTAAGGTCCTGGAAGAGAGAG i colAng1.NW_012116221v1 C 0 I 2 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1500.000000 s hg38.chr4_KI270789v1_alt 170191 1 + 205944 G s panTro5.chr4 192956328 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838019 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872532 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761708 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988028 1 + 189454096 G i macFas5.chr5 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929734 2 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=23681.000000 s hg38.chr4_KI270789v1_alt 170192 28 + 205944 TTTGTAGATATCATGATGTTCTAATAGA s panTro5.chr4 192956329 28 + 194502333 TTTGTAGATATCATGATGTTCTAATAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838020 28 + 195804263 TTTGTAGATATCATGATGTTCTAATAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872533 28 + 4876863 GTTGTAGATTACATGATATTCAAATAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 28 + 115148730 GCTGTAGATTACATGATATCCAAATTGC i nomLeu3.chr7b C 0 T 302 s macFas5.chr5 187987969 28 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGG i macFas5.chr5 T 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929734 2 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8695.000000 s hg38.chr4_KI270789v1_alt 170220 7 + 205944 AGGTAAC s panTro5.chr4 192956357 7 + 194502333 AGGTAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838048 7 + 195804263 AGGTAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872561 7 + 4876863 AGGTAAC i gorGor5.CYUI01015356v1 C 0 I 977 s nomLeu3.chr7b 112761435 7 + 115148730 AGGTAAC i nomLeu3.chr7b T 302 C 0 s macFas5.chr5 187987997 7 + 189454096 AGGTGAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929734 2 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=25941.000000 s hg38.chr4_KI270789v1_alt 170227 20 + 205944 AGCATAAGGTCCTGGAAGGC s panTro5.chr4 192956364 20 + 194502333 AGCATAAGGTCCTGGAAGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838055 20 + 195804263 AGCATAAGGTCCTGGAAGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873545 20 + 4876863 AGCATAAGGTCCTGGAAGAT i gorGor5.CYUI01015356v1 I 977 C 0 s nomLeu3.chr7b 112761442 20 + 115148730 AGCATAAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988004 20 + 189454096 AGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929734 2 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 126 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19807.000000 s hg38.chr4_KI270789v1_alt 170247 7 + 205944 AAAGGTA s panTro5.chr4 192956384 7 + 194502333 AAAGGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838075 7 + 195804263 AAAGGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873565 7 + 4876863 AAAGTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761462 7 + 115148730 AAAGGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 7 + 190429646 AAAGGTG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 7 + 189454096 AAAGGTG i macFas5.chr5 T 121 C 0 s macNem1.NW_012013133v1 24379229 7 - 25927173 AAAGGTG i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365724 7 + 135778131 AAAGGTG i chlSab2.chr7 T 126 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929734 2 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=168844.000000 s hg38.chr4_KI270789v1_alt 170254 46 + 205944 TTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCT s panTro5.chr4 192956391 46 + 194502333 TTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838082 46 + 195804263 TTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873572 46 + 4876863 TTGTAGATTACCTGGTGTCCAAATAGGAGGTAATAGCATAAGGTCC i gorGor5.CYUI01015356v1 C 0 I 122 s nomLeu3.chr7b 112761469 46 + 115148730 TTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045023 46 + 190429646 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987910 46 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379236 46 - 25927173 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365731 46 + 135778131 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929736 46 + 2368649 TTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCC i colAng1.NW_012116221v1 I 2 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=46725.000000 s hg38.chr4_KI270789v1_alt 170300 13 + 205944 TGGAAGAGAGAGG s panTro5.chr4 192956437 13 + 194502333 TGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838128 13 + 195804263 TGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873740 13 + 4876863 CGGAAGACAAAAG i gorGor5.CYUI01015356v1 I 122 I 178 s nomLeu3.chr7b 112761515 13 + 115148730 TGGAAGAGAGAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045069 13 + 190429646 TGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987956 13 + 189454096 TGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379282 13 - 25927173 TGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365777 13 + 135778131 TGGACGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929782 13 + 2368649 TGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=195380.000000 s hg38.chr4_KI270789v1_alt 170313 54 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATACCGTAAGGTCCTGGAAGA s panTro5.chr4 192956450 54 + 194502333 GTTGTCGATTACCTGATGTCCAAATAGGAGGTAATACCGTAAGGTCCTGTAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838141 54 + 195804263 GTTGTCGATTACCTGATGTCCAAATAGGAGGTAATACCGTAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873931 54 + 4876863 GTTATAGATTACGTGATGTCCAAACAGGAGGTGATAGCATAAGGTCCTGGAAGA i gorGor5.CYUI01015356v1 I 178 C 0 s nomLeu3.chr7b 112761528 54 + 115148730 GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 54 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987969 54 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 54 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365790 54 + 135778131 GTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 54 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=2648.000000 s hg38.chr4_KI270789v1_alt 170367 2 + 205944 CA s panTro5.chr4 192956504 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838195 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873985 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761582 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 2 + 189454096 GA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134365844 2 + 135778131 CA i chlSab2.chr7 C 0 T 122 s colAng1.NW_012116221v1 929849 2 + 2368649 GA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5044.000000 s hg38.chr4_KI270789v1_alt 170369 4 + 205944 CAGG s panTro5.chr4 192956506 4 + 194502333 CAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838197 4 + 195804263 CAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873987 4 + 4876863 AAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761584 4 + 115148730 AAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988025 4 + 189454096 GAGG i macFas5.chr5 C 0 T 121 s colAng1.NW_012116221v1 929851 4 + 2368649 GAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3285.000000 s hg38.chr4_KI270789v1_alt 170373 2 + 205944 TG s panTro5.chr4 192956510 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838201 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873991 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 T 1277 s nomLeu3.chr7b 112761588 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 2 + 189454096 TG i macFas5.chr5 T 121 C 0 s colAng1.NW_012116221v1 929855 1 + 2368649 -G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=83105.000000 s hg38.chr4_KI270789v1_alt 170375 47 + 205944 TTGTAGATTACCTGATGTCCAAATAGGAGGCAATAGCATAAGGTCCT s panTro5.chr4 192956512 47 + 194502333 TTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGATCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838203 47 + 195804263 TTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGATCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872716 47 + 4876863 TTGTAGATTACCTGATGTCCAAATAGAAGGTAATAGCATAAGGTCCT i gorGor5.CYUI01015356v1 T 1277 C 0 s nomLeu3.chr7b 112761590 47 + 115148730 TTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCT i nomLeu3.chr7b C 0 I 302 s macFas5.chr5 187987910 47 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929856 47 + 2368649 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCT i colAng1.NW_012116221v1 C 0 T 168 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1359.000000 s hg38.chr4_KI270789v1_alt 170422 3 + 205944 CAA s panTro5.chr4 192956559 3 + 194502333 CAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838250 3 + 195804263 CAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872763 3 + 4876863 GGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761939 3 + 115148730 CGA i nomLeu3.chr7b I 302 C 0 s macFas5.chr5 187987957 3 + 189454096 GGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7147.000000 s hg38.chr4_KI270789v1_alt 170425 10 + 205944 AGACAAAGTT s panTro5.chr4 192956562 10 + 194502333 AGACCAAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838253 10 + 195804263 AGACCAAGTT i panPan2.chr4 C 0 I 303 s gorGor5.CYUI01015356v1 3872766 10 + 4876863 ATACGAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761942 10 + 115148730 AGAGAAAGCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 170435 2 + 205944 GT s panTro5.chr4 192956572 2 + 194502333 GT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838566 2 + 195804263 GT i panPan2.chr4 I 303 C 0 s gorGor5.CYUI01015356v1 3872776 2 + 4876863 GT i gorGor5.CYUI01015356v1 C 0 I 1215 s nomLeu3.chr7b 112761952 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 2 + 189454096 GT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52576.000000 s hg38.chr4_KI270789v1_alt 170437 47 + 205944 TGTAGATTACCTGATGTCCAAATAGGAGGGAATAGCATAAGGTCCTG s panTro5.chr4 192956574 47 + 194502333 TGTAGATTACCTGATGTCCAAATAGGAGGGAATAGCATAAGGTCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838568 47 + 195804263 TGTGGATTACCTGATGTCCAAATATTCGGCAATAGCGTAAGGTCCTG i panPan2.chr4 C 0 T 303 s gorGor5.CYUI01015356v1 3873993 47 + 4876863 TGTAGATTACCTCATGTCCAAATGGGAAGAAATGGCATAAGGTCCTG i gorGor5.CYUI01015356v1 I 1215 C 0 s nomLeu3.chr7b 112761954 47 + 115148730 TGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987911 47 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8336.000000 s hg38.chr4_KI270789v1_alt 170484 14 + 205944 GAAGATATAGGTTT s panTro5.chr4 192956621 14 + 194502333 GAAGATATAGGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838312 14 + 195804263 GAAGATATAGGTTT i panPan2.chr4 T 303 C 0 s nomLeu3.chr7b 112762001 14 + 115148730 GAAGAGAAAGGTGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987958 14 + 189454096 GAAGAGAGAAGGTT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3874040 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=1146.000000 s hg38.chr4_KI270789v1_alt 170498 2 + 205944 TG s panTro5.chr4 192956635 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838326 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762015 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987972 0 + 189454096 C e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3874040 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=28691.000000 s hg38.chr4_KI270789v1_alt 170500 37 + 205944 TTAGATTACCTGATATCCAAATAGGAGGTAATAGCAT s panTro5.chr4 192956637 37 + 194502333 TTACATTACCTGATATCCAAATAGGAGGTAATAGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838328 37 + 195804263 TTACATTACCTGATATCCAAATAGGAGGTAATAGCAT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762017 36 + 115148730 -TAGATTACATGATGTCCAAGTAGGAGGTAATAGCAT i nomLeu3.chr7b C 0 T 525 s macFas5.chr5 187987972 37 + 189454096 GTAGATTACCTGATGTCCACGTAGGAGGTGATAGCAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e gorGor5.CYUI01015356v1 3874040 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=4509.000000 s hg38.chr4_KI270789v1_alt 170537 9 + 205944 AAGGTCCTC s panTro5.chr4 192956674 9 + 194502333 AAGGTCCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838365 9 + 195804263 AAGGTCCTC i panPan2.chr4 C 0 I 241 s macFas5.chr5 187988009 9 + 189454096 AAGGTCCTG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762053 525 + 115148730 T e gorGor5.CYUI01015356v1 3874040 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=1910.000000 s hg38.chr4_KI270789v1_alt 170546 2 + 205944 GA s panTro5.chr4 192956683 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838615 2 + 195804263 GA i panPan2.chr4 I 241 C 0 s gorGor5.CYUI01015356v1 3874040 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988018 2 + 189454096 GA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762053 525 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7704.000000 s hg38.chr4_KI270789v1_alt 170548 10 + 205944 AGACAAAGGT s panTro5.chr4 192956685 10 + 194502333 AGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838617 10 + 195804263 ATACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874042 10 + 4876863 AGACAAAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e nomLeu3.chr7b 112762053 525 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=59804.000000 s hg38.chr4_KI270789v1_alt 170558 51 + 205944 GTTGTAGACTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192956695 51 + 194502333 GTTGTAGACTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838627 51 + 195804263 GTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATAGCATAAGGTCCTCGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874052 51 + 4876863 GTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761528 51 + 115148730 GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGA i nomLeu3.chr7b T 525 C 0 s macFas5.chr5 187987909 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3950.000000 s hg38.chr4_KI270789v1_alt 170609 4 + 205944 AGAC s panTro5.chr4 192956746 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838678 4 + 195804263 AAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874103 4 + 4876863 AGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761579 4 + 115148730 AGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365846 122 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=19256.000000 s hg38.chr4_KI270789v1_alt 170613 6 + 205944 AAAGGT s panTro5.chr4 192956750 6 + 194502333 AAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838682 6 + 195804263 AAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874107 6 + 4876863 AAAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761583 6 + 115148730 AAAGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 6 + 190429646 AAAGGT i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 6 + 189454096 AAAGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 6 - 25927173 AAAGGT i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365724 6 + 135778131 AAAGGT i chlSab2.chr7 T 122 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929903 168 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=196266.000000 s hg38.chr4_KI270789v1_alt 170619 52 + 205944 GTTGTAGATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTGCTGGAA s panTro5.chr4 192956756 52 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838688 52 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874113 52 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAATAGCATAAGGTCCTGGAA i gorGor5.CYUI01015356v1 C 0 T 906 s nomLeu3.chr7b 112761589 52 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 52 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 52 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 52 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 52 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929735 52 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGAA i colAng1.NW_012116221v1 T 168 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=3600.000000 s hg38.chr4_KI270789v1_alt 170671 1 + 205944 G s panTro5.chr4 192956808 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838740 1 + 195804263 G i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761641 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045074 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987961 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379287 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365782 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929787 1 + 2368649 G i colAng1.NW_012116221v1 C 0 I 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3874165 906 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1636.000000 s hg38.chr4_KI270789v1_alt 170672 1 + 205944 C s panTro5.chr4 192956809 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838741 1 + 195804263 A i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761642 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045075 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987962 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379288 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365783 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929848 1 + 2368649 A i colAng1.NW_012116221v1 I 60 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3874165 906 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=210882.000000 s hg38.chr4_KI270789v1_alt 170673 60 + 205944 GAGAGGGCTATAGATTACCTGATATCCAAATAGGAGGTAATACCATAAGGTCCTGGAAGA s panTro5.chr4 192956810 60 + 194502333 GAGAGGGCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838742 60 + 195804263 GAGAGGGCTGTAGATTACCTGATATCCAAAAAGGAGGTAATACCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873259 60 + 4876863 GAGAGCGTTGTAGATTACCTGATTTCTAAATAGGAGGTAATACCATAAGCTCCTGGAAGA i gorGor5.CYUI01015356v1 T 906 C 0 s nomLeu3.chr7b 112761643 60 + 115148730 CAGAGGGCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045076 60 + 190429646 GAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987963 60 + 189454096 GAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379289 60 - 25927173 GAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365784 60 + 135778131 GAGAGGGTTGTAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 T 120 s colAng1.NW_012116221v1 929849 60 + 2368649 GAGAGGGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6964.000000 s hg38.chr4_KI270789v1_alt 170733 3 + 205944 GAG s panTro5.chr4 192956870 3 + 194502333 GAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838802 3 + 195804263 GAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873319 3 + 4876863 TAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761703 3 + 115148730 GAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045136 3 + 190429646 GAG i rheMac8.chr5 C 0 T 123 s macFas5.chr5 187988023 3 + 189454096 GAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379349 3 - 25927173 GAG i macNem1.NW_012013133v1 C 0 T 123 s colAng1.NW_012116221v1 929909 3 + 2368649 GAG i colAng1.NW_012116221v1 C 0 T 243 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=669.000000 s hg38.chr4_KI270789v1_alt 170736 2 + 205944 GG s panTro5.chr4 192956873 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838805 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873322 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 I 549 s nomLeu3.chr7b 112761706 2 + 115148730 AC i nomLeu3.chr7b C 0 I 2 s macFas5.chr5 187988026 2 + 189454096 AG i macFas5.chr5 C 0 T 58 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=51927.000000 s hg38.chr4_KI270789v1_alt 170738 48 + 205944 TTGTAGATTACGTGATGTCCAATTAGGAGGTAATAGCATAAGGTCCTT s panTro5.chr4 192956875 48 + 194502333 TTGTAGATTACGTGATGTCCAATTAGGAGGTAATAGCATAAGGTCCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838807 48 + 195804263 TTGTAGATTACGTGATGTCCAATTAGGAGGTAATAGCATAAGGTCCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873873 47 + 4876863 CTGTAGATTACCTGATGTCCAA-TAGGTGGTAATAGCATAAAGTCCTG i gorGor5.CYUI01015356v1 I 549 C 0 s nomLeu3.chr7b 112761710 48 + 115148730 CTGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTC i nomLeu3.chr7b I 2 T 351 s macFas5.chr5 187987970 48 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTG i macFas5.chr5 T 58 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1910.000000 s hg38.chr4_KI270789v1_alt 170786 2 + 205944 GA s panTro5.chr4 192956923 2 + 194502333 GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838855 2 + 195804263 GA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873920 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988018 2 + 189454096 GA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e nomLeu3.chr7b 112761758 351 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4317.000000 s hg38.chr4_KI270789v1_alt 170788 10 + 205944 AGACAAAGGT s panTro5.chr4 192956925 10 + 194502333 CGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838857 10 + 195804263 CGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873922 9 + 4876863 AGAGAGAGG- i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e nomLeu3.chr7b 112761758 351 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=59365.000000 s hg38.chr4_KI270789v1_alt 170798 48 + 205944 GTTGTAGATTACGTGATGTCCAAATAGGAGGTTATAGCATAAGGTCCG s panTro5.chr4 192956935 48 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838867 48 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873931 48 + 4876863 GTTATAGATTACGTGATGTCCAAACAGGAGGTGATAGCATAAGGTCCT i gorGor5.CYUI01015356v1 C 0 T 2118 s nomLeu3.chr7b 112761407 48 + 115148730 GCTGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCT i nomLeu3.chr7b T 351 I 182 s macFas5.chr5 187987909 48 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4365.000000 s hg38.chr4_KI270789v1_alt 170846 3 + 205944 GGA s panTro5.chr4 192956983 3 + 194502333 GGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838915 3 + 195804263 GGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871861 3 + 4876863 GGA i gorGor5.CYUI01015356v1 T 2118 C 0 s nomLeu3.chr7b 112761637 3 + 115148730 GGA i nomLeu3.chr7b I 182 C 0 s macFas5.chr5 187987957 3 + 189454096 GGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3535.000000 s hg38.chr4_KI270789v1_alt 170849 4 + 205944 AGAC s panTro5.chr4 192956986 4 + 194502333 AGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838918 4 + 195804263 AGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871864 4 + 4876863 ATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761640 4 + 115148730 AGAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 4 + 189454096 AGAG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929912 243 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 120 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 123 - 25927173 T e rheMac8.chr5 189045139 123 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=283723.000000 s hg38.chr4_KI270789v1_alt 170853 80 + 205944 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAGAGAGGGCTGTAGATTACCT s panTro5.chr4 192956990 80 + 194502333 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTCATAGCATAAGGTGCTGGAAGAGAGACGGCTGTAGATTACCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838922 79 + 195804263 AAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTCATAG-ATAAGGTGCTGGAAGAGAGACGGCTGTAGATTACCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871868 80 + 4876863 AAAGGTGTTGTAGTTTACCTGATGTCCAAATAAGTGGTAATAGCATAAGGTCCTGCAAGAGAGAGGGTTGTAGATTACCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761644 79 + 115148730 AGAGG-GCTGTAGATTACATGATGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGAAGAGAGACGGCTGTAGATTACAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 80 + 190429646 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCT i rheMac8.chr5 T 123 C 0 s macFas5.chr5 187987903 80 + 189454096 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379229 80 - 25927173 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCT i macNem1.NW_012013133v1 T 123 C 0 s chlSab2.chr7 134365724 80 + 135778131 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGGGTTGTAGATTACCT i chlSab2.chr7 T 120 C 0 s colAng1.NW_012116221v1 929669 80 + 2368649 AAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCGTAAGGTCCTGGAAGAGAGAGGGTTGTAGATTACCT i colAng1.NW_012116221v1 T 243 I 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=131500.000000 s hg38.chr4_KI270789v1_alt 170933 37 + 205944 GATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192957070 37 + 194502333 GATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839001 37 + 195804263 GATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871948 37 + 4876863 GATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761723 37 + 115148730 GATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045096 37 + 190429646 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987983 37 + 189454096 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 121 s macNem1.NW_012013133v1 24379309 37 - 25927173 GATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365804 37 + 135778131 GATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929869 37 + 2368649 GATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGA i colAng1.NW_012116221v1 I 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=12690.000000 s hg38.chr4_KI270789v1_alt 170970 3 + 205944 AGA s panTro5.chr4 192957107 3 + 194502333 AGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839038 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871985 3 + 4876863 AGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 3 + 115148730 AGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045133 3 + 190429646 AGA i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187987899 3 + 189454096 AGA i macFas5.chr5 T 121 I 1 s macNem1.NW_012013133v1 24379346 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 T 120 s chlSab2.chr7 134365841 3 + 135778131 AGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929906 3 + 2368649 AGA i colAng1.NW_012116221v1 C 0 T 114 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-300.000000 s hg38.chr4_KI270789v1_alt 170973 1 + 205944 C s panTro5.chr4 192957110 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839041 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871988 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761763 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 134365844 1 + 135778131 C i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 120 - 25927173 T e macFas5.chr5 187987902 1 + 189454096 I e rheMac8.chr5 189045136 120 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5206.000000 s hg38.chr4_KI270789v1_alt 170974 5 + 205944 AAAGG s panTro5.chr4 192957111 2 + 194502333 A---G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839042 2 + 195804263 A---G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871989 5 + 4876863 AAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761764 5 + 115148730 AAAGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045016 5 + 190429646 AAAGG i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987903 5 + 189454096 AAAGG i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24379229 5 - 25927173 AAAGG i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365845 5 + 135778131 AGAGG i chlSab2.chr7 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=415.000000 s hg38.chr4_KI270789v1_alt 170979 1 + 205944 T s panTro5.chr4 192957113 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839044 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871994 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761769 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045021 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379234 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365729 1 + 135778131 T i chlSab2.chr7 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 114 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=218839.000000 s hg38.chr4_KI270789v1_alt 170980 62 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGAAGAGAGAGGGC s panTro5.chr4 192957114 62 + 194502333 GTTGTAGATTACGTGATGTCCAAATAGGAGGTAATAGCATAAGGTGCTGGTAGAGAGAGGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839045 62 + 195804263 GTTGTAGATTACGTGATGTCCAAATAGGAGGTAATAGCATCAGGTGCTGGTAGAGAGAGGGC i panPan2.chr4 C 0 T 357 s gorGor5.CYUI01015356v1 3871995 62 + 4876863 GTTGTACATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCATGGAAGAGAGAGAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761770 62 + 115148730 GTTGTAGATGACCTGATGTCCAAATAGGAGGTAATAGCATAAAGTCCTTGGAGAGAGAGGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045022 62 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987909 62 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379235 62 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365730 62 + 135778131 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGGGT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 62 + 2368649 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAGGGT i colAng1.NW_012116221v1 T 114 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=40050.000000 s hg38.chr4_KI270789v1_alt 171042 11 + 205944 TGTAGATTACC s panTro5.chr4 192957176 10 + 194502333 TGTAGATTAC- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838750 11 + 195804263 TGTAGATTACC i panPan2.chr4 T 357 C 0 s gorGor5.CYUI01015356v1 3872057 11 + 4876863 GGTAGATTACC i gorGor5.CYUI01015356v1 C 0 I 1765 s nomLeu3.chr7b 112761832 11 + 115148730 TGTAGATTACC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045084 11 + 190429646 TGTAGATTACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987971 11 + 189454096 TGTAGATTACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379297 11 - 25927173 TGTAGATTACC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365792 11 + 135778131 TGTAGATTACC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929857 11 + 2368649 TGTAGATTACC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=19811.000000 s hg38.chr4_KI270789v1_alt 171053 8 + 205944 TGATATCC s panPan2.chr4 192838761 8 + 195804263 TGATATCC i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761843 8 + 115148730 TGATGTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045095 8 + 190429646 TGATGTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987982 8 + 189454096 TGATGTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379308 8 - 25927173 TGATGTCC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365803 8 + 135778131 TGATGTCC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929868 8 + 2368649 TGATGTCC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3872068 1765 + 4876863 I e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=69885.000000 s hg38.chr4_KI270789v1_alt 171061 27 + 205944 AAATAGGAGGTAATAGCATAAGGTCCT s panPan2.chr4 192838769 27 + 195804263 AAAAAGGAGGTAATACCATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873833 27 + 4876863 AAATAGGAGGTAATATCATAAGGTGCT i gorGor5.CYUI01015356v1 I 1765 C 0 s nomLeu3.chr7b 112761851 27 + 115148730 AAATTGCAGATAATAGCATAAGGTCCT i nomLeu3.chr7b C 0 T 588 s rheMac8.chr5 189045103 27 + 190429646 ACGTAGGAGGTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987990 27 + 189454096 ACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379316 27 - 25927173 ACGTAGGAGGTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365811 27 + 135778131 ACGTGGGAGGTGATAGCATAAGGTCCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929876 27 + 2368649 ACGTAGGAGGTGATAGCGTAAGGTCCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=7294.000000 s hg38.chr4_KI270789v1_alt 171088 3 + 205944 GGA s panPan2.chr4 192838796 3 + 195804263 GGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873860 3 + 4876863 GGA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045130 3 + 190429646 GGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988017 3 + 189454096 GGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379343 3 - 25927173 GGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365838 3 + 135778131 GGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929903 3 + 2368649 GGA i colAng1.NW_012116221v1 C 0 T 58 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6979.000000 s hg38.chr4_KI270789v1_alt 171091 3 + 205944 AGA s panPan2.chr4 192838799 3 + 195804263 AGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873863 3 + 4876863 AAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045133 3 + 190429646 AGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988020 3 + 189454096 AGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379346 3 - 25927173 AGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365841 3 + 135778131 AGA i chlSab2.chr7 C 0 T 114 s colAng1.NW_012116221v1 929848 3 + 2368649 AGA i colAng1.NW_012116221v1 T 58 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6111.000000 s hg38.chr4_KI270789v1_alt 171094 3 + 205944 GAG s panPan2.chr4 192838802 3 + 195804263 GAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873866 3 + 4876863 GAG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045136 3 + 190429646 GAG i rheMac8.chr5 C 0 T 117 s macFas5.chr5 187988023 3 + 189454096 GAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379349 3 - 25927173 GAG i macNem1.NW_012013133v1 C 0 T 117 s colAng1.NW_012116221v1 929851 3 + 2368649 GAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=205.000000 s hg38.chr4_KI270789v1_alt 171097 1 + 205944 G s panPan2.chr4 192838805 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873869 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988026 1 + 189454096 A i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929854 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365844 114 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 117 - 25927173 T e rheMac8.chr5 189045139 117 + 190429646 T e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=2800.000000 s hg38.chr4_KI270789v1_alt 171098 1 + 205944 G s panPan2.chr4 192838806 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873870 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045022 1 + 190429646 G i rheMac8.chr5 T 117 C 0 s macFas5.chr5 187988027 1 + 189454096 G i macFas5.chr5 C 0 T 118 s macNem1.NW_012013133v1 24379235 1 - 25927173 G i macNem1.NW_012013133v1 T 117 C 0 s chlSab2.chr7 134365730 1 + 135778131 G i chlSab2.chr7 T 114 C 0 s colAng1.NW_012116221v1 929855 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=1113.000000 s hg38.chr4_KI270789v1_alt 171099 1 + 205944 T s panPan2.chr4 192838807 1 + 195804263 T i panPan2.chr4 C 0 I 299 s gorGor5.CYUI01015356v1 3873871 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 I 2 s rheMac8.chr5 189045023 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987910 1 + 189454096 T i macFas5.chr5 T 118 C 0 s macNem1.NW_012013133v1 24379236 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365731 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929856 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e panTro5.chr4 192957186 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=25051.000000 s hg38.chr4_KI270789v1_alt 171100 11 + 205944 TGTAGATTACT s panTro5.chr4 192957186 1 + 194502333 ----------T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839107 11 + 195804263 TGTAGATTACT i panPan2.chr4 I 299 C 0 s gorGor5.CYUI01015356v1 3873874 11 + 4876863 TGTAGATTACC i gorGor5.CYUI01015356v1 I 2 T 1817 s rheMac8.chr5 189045024 11 + 190429646 TGTAGATTACC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987911 11 + 189454096 TGTAGATTACC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379237 11 - 25927173 TGTAGATTACC i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365732 11 + 135778131 TGTAGATTACC i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929857 11 + 2368649 TGTAGATTACC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=136305.000000 s hg38.chr4_KI270789v1_alt 171111 47 + 205944 TGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAGAGG s panTro5.chr4 192957187 47 + 194502333 TGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTGGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839118 47 + 195804263 TGATGTCCAAATAGGACGTAAGAGCATAAGGTCCTGGAAGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872068 47 + 4876863 TGATGTCCAAACAGGAGTTAATAGCATAAGGTCCTTGGAGAGAGAGG i gorGor5.CYUI01015356v1 T 1817 C 0 s rheMac8.chr5 189045035 47 + 190429646 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987922 47 + 189454096 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379248 47 - 25927173 TGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365743 47 + 135778131 TGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGACGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929868 47 + 2368649 TGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAAGAGAGAGG i colAng1.NW_012116221v1 C 0 T 238 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=42575.000000 s hg38.chr4_KI270789v1_alt 171158 18 + 205944 GTTGTAGATTACCCGATG s panTro5.chr4 192957234 18 + 194502333 GTTGTAGATTACCCGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839165 18 + 195804263 GTTGTAGATTACCCGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872115 18 + 4876863 GTTGTAGATTACCTGATA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045082 18 + 190429646 GTTGTAGATTACCTGATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 18 + 189454096 GTTGTAGATTACCTGATG i macFas5.chr5 C 0 T 55 s macNem1.NW_012013133v1 24379295 18 - 25927173 GTTGTAGATTACCTGATG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 18 + 135778131 GTTGTAGATTACCTGATG i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8022.000000 s hg38.chr4_KI270789v1_alt 171176 4 + 205944 TCCA s panTro5.chr4 192957252 4 + 194502333 TCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839183 4 + 195804263 TCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872133 4 + 4876863 TCCA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045100 4 + 190429646 TCCA i rheMac8.chr5 C 0 T 88 s macNem1.NW_012013133v1 24379313 4 - 25927173 TCCA i macNem1.NW_012013133v1 C 0 T 88 s chlSab2.chr7 134365808 4 + 135778131 TCCA i chlSab2.chr7 C 0 T 82 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macFas5.chr5 187987987 55 + 189454096 T e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=55666.000000 s hg38.chr4_KI270789v1_alt 171180 68 + 205944 ATAGGAGGTAATAGCATAAGATCCTGCAAGAGAGAGGGTTGTAGATCATCTGATGTCCAAATATTAGG s panTro5.chr4 192957256 68 + 194502333 ATAGGAGGTAATAGCATAAGATCCTGCAAGAGAGAGGGTTGTAGATCATCTGATGTCCAAATATTAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839187 68 + 195804263 ATAGGAGGTAATAGCATAAGATCCTGCAAGAGAGAGGGTTGTAGATCATCTGATGTCCAAATATTAGG i panPan2.chr4 C 0 T 396 s gorGor5.CYUI01015356v1 3872137 68 + 4876863 ATAGGAGGTAATAGCATAAGGTCCTGCAAGAGAGAGGGTTGTAGGTTATCTGATGTCCAAATAGGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987932 68 + 189454096 GTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCCACGTAGGAGG i macFas5.chr5 T 55 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379317 88 - 25927173 T e rheMac8.chr5 189045104 88 + 190429646 T e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8796.000000 s hg38.chr4_KI270789v1_alt 171248 22 + 205944 TAATAGCATAAGGTCCTGGGAT s panTro5.chr4 192957324 22 + 194502333 TAATAGCATAAGGTCCTCGGAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872205 22 + 4876863 TAATACCTTAAGGTCCTGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988000 22 + 189454096 TGATAGCATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379317 88 - 25927173 T e rheMac8.chr5 189045104 88 + 190429646 T e nomLeu3.chr7b 112761878 588 + 115148730 T e panPan2.chr4 192839255 396 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1010.000000 s hg38.chr4_KI270789v1_alt 171270 2 + 205944 AC s panTro5.chr4 192957346 2 + 194502333 AC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838859 2 + 195804263 AC i panPan2.chr4 T 396 C 0 s gorGor5.CYUI01015356v1 3872227 2 + 4876863 AC i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187988022 2 + 189454096 AG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379317 88 - 25927173 T e rheMac8.chr5 189045104 88 + 190429646 T e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8082.000000 s hg38.chr4_KI270789v1_alt 171272 5 + 205944 AAAGG s panTro5.chr4 192957348 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838861 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872229 5 + 4876863 ACAGG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045016 5 + 190429646 AAAGG i rheMac8.chr5 T 88 C 0 s macFas5.chr5 187988024 5 + 189454096 AGAGG i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379229 5 - 25927173 AAAGG i macNem1.NW_012013133v1 T 88 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 171277 1 + 205944 T s panTro5.chr4 192957353 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838866 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872234 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045021 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379234 1 - 25927173 T i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macFas5.chr5 187988029 60 + 189454096 T e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=2100.000000 s hg38.chr4_KI270789v1_alt 171278 1 + 205944 G s panTro5.chr4 192957354 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838867 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872235 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045022 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 1 + 189454096 G i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379235 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761878 588 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=102224.000000 s hg38.chr4_KI270789v1_alt 171279 47 + 205944 TTGTAGATTACCTGATATCCCGATAGGAGGAAATAGCATAAGATCAC s panTro5.chr4 192957355 47 + 194502333 TTGTAGATTACCTGATATCCAGATAGGAGGAAATAGCATAAGGTCAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838868 47 + 195804263 TTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872236 47 + 4876863 TTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAGGTCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761290 47 + 115148730 CTGTAGATTACCTGATGTGCAAATAGGAGGTAATAGCATAAGGTCCC i nomLeu3.chr7b T 588 C 0 s rheMac8.chr5 189045023 47 + 190429646 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987970 47 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379236 47 - 25927173 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=25168.000000 s hg38.chr4_KI270789v1_alt 171326 12 + 205944 GGAAGAGAGAGG s panTro5.chr4 192957402 12 + 194502333 GGAAGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838915 12 + 195804263 GGAAGACAAAGG i panPan2.chr4 C 0 I 60 s gorGor5.CYUI01015356v1 3872283 12 + 4876863 GGAAGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761337 12 + 115148730 GAAAGAGAGGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045070 12 + 190429646 GGAAGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987957 12 + 189454096 GGAAGAGAGAAG i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379283 12 - 25927173 GGAAGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=128145.000000 s hg38.chr4_KI270789v1_alt 171338 57 + 205944 GCAGTAGATTACCTGATGTCCAAATAGCAGGTAATAGCATAATGTCCTGGAAGAGAG s panTro5.chr4 192957414 57 + 194502333 GCAGTAGATTACCTGATGTCCAAATAGCAGGTAATAGCATAATGTCCTGGAAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838987 57 + 195804263 GCTGTAGATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAG i panPan2.chr4 I 60 C 0 s gorGor5.CYUI01015356v1 3872295 57 + 4876863 GCAGTAGATTACCTGATGTCCAAATAGCAGGTAATAGCATACGGTCCTGGAAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761349 57 + 115148730 GTTGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 57 + 190429646 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAG i rheMac8.chr5 C 0 T 115 s macFas5.chr5 187987969 57 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 57 - 25927173 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGAG i macNem1.NW_012013133v1 C 0 T 115 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-103.000000 s hg38.chr4_KI270789v1_alt 171395 1 + 205944 G s panTro5.chr4 192957471 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839044 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872352 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761406 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988026 1 + 189454096 A i macFas5.chr5 C 0 T 118 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 115 - 25927173 T e rheMac8.chr5 189045139 115 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1943.000000 s hg38.chr4_KI270789v1_alt 171396 2 + 205944 GC s panTro5.chr4 192957472 2 + 194502333 GC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839045 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872353 2 + 4876863 GC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761407 2 + 115148730 GC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 2 + 189454096 GT i macFas5.chr5 T 118 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929915 238 + 2368649 T e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 115 - 25927173 T e rheMac8.chr5 189045139 115 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52786.000000 s hg38.chr4_KI270789v1_alt 171398 32 + 205944 TGTAGATTACCTGGTGTCCAAATAGGAGGTAA s panTro5.chr4 192957474 32 + 194502333 TGTAGATTACCTGGTGTCCAAATAGGAGGTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839047 32 + 195804263 TGTAGATTACGTGATGTCCAAATAGGAGGTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872355 32 + 4876863 TGTAGATTACCTGATGTCCAAATAGGATTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761409 32 + 115148730 TGTAGATTACCTGATGTCCAAATAGGAGGTAA i nomLeu3.chr7b C 0 T 118 s macFas5.chr5 187987911 32 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929677 32 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGCTGA i colAng1.NW_012116221v1 T 238 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 115 - 25927173 T e rheMac8.chr5 189045139 115 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=23071.000000 s hg38.chr4_KI270789v1_alt 171430 19 + 205944 TAGGATAAGGTCATTGGAG s panTro5.chr4 192957506 19 + 194502333 TAGGATAAGGTCATTGAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839079 19 + 195804263 TAGCATCAGGTGCTGGTAG i panPan2.chr4 C 0 T 5940 s gorGor5.CYUI01015356v1 3872387 19 + 4876863 TAGCATACGGTCATGGAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761323 19 + 115148730 TAGCATAAGGTCCCGAAAG i nomLeu3.chr7b T 118 C 0 s macFas5.chr5 187987943 19 + 189454096 TAGCATAAGGTCCTGGAAG i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929709 19 + 2368649 TAGCGTAAGGTCCTGGAAG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 115 - 25927173 T e rheMac8.chr5 189045139 115 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9969.000000 s hg38.chr4_KI270789v1_alt 171449 9 + 205944 AGAGAGGGC s panTro5.chr4 192957525 9 + 194502333 AGAGAGGGC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872406 9 + 4876863 AGAGAGGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761342 9 + 115148730 AGAGGGAGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987962 9 + 189454096 AGAGAAGGT i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 929728 9 + 2368649 AGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379352 115 - 25927173 T e rheMac8.chr5 189045139 115 + 190429646 T e panPan2.chr4 192839098 5940 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=139236.000000 s hg38.chr4_KI270789v1_alt 171458 49 + 205944 TGTAGATTACCTGATGTCCAAGTAGGAGGTAATCACATAAGGTCCTGGA s panTro5.chr4 192957534 49 + 194502333 TGTAGATTACCTGATGTCCAAATAGGAGGTAATCACATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833158 49 + 195804263 TGTAGATTATCTGATGTCCAAGTAGGAGGTAATCCCATAAGGTCCTGGA i panPan2.chr4 T 5940 C 0 s gorGor5.CYUI01015356v1 3872415 49 + 4876863 TGTAGATGACATGATGTCCAAATAGGAGGTAATATCATAAGGTGCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761351 49 + 115148730 TGTACATTACATGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 I 189 s rheMac8.chr5 189045024 49 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 T 115 C 0 s macFas5.chr5 187987971 49 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379237 49 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 T 115 C 0 s colAng1.NW_012116221v1 929737 49 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGCTGATAGCATAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=19822.000000 s hg38.chr4_KI270789v1_alt 171507 9 + 205944 AGAGAGAGG s panTro5.chr4 192957583 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833207 9 + 195804263 AGATAGACG i panPan2.chr4 C 0 I 909 s gorGor5.CYUI01015356v1 3872464 9 + 4876863 AGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045073 9 + 190429646 AGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988020 9 + 189454096 AGAGAGAGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379286 9 - 25927173 AGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929786 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761400 189 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=7718.000000 s hg38.chr4_KI270789v1_alt 171516 5 + 205944 GTTTT s panTro5.chr4 192957592 5 + 194502333 GTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834125 5 + 195804263 GCTGT i panPan2.chr4 I 909 C 0 s nomLeu3.chr7b 112761589 5 + 115148730 GTTGT i nomLeu3.chr7b I 189 C 0 s rheMac8.chr5 189045082 5 + 190429646 GTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988029 5 + 189454096 GTGTT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379295 5 - 25927173 GTTGT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929795 5 + 2368649 GTTGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3872473 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=85245.000000 s hg38.chr4_KI270789v1_alt 171521 43 + 205944 ATATTACCTCATGTCCAAATAGGAGGTAAGAGCATAAGGCCCG s panTro5.chr4 192957597 43 + 194502333 ATATTACCGCATGTCCAAATAGGAGGTAAGAGCATAAGGCCCG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834130 43 + 195804263 AGATGACGTGATGTCCAAATAGGAGGTAATATCATAAGGTGCT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761594 43 + 115148730 AGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCT i nomLeu3.chr7b C 0 I 241 s rheMac8.chr5 189045087 43 + 190429646 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987974 43 + 189454096 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379300 43 - 25927173 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929800 43 + 2368649 AGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3872473 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=16044.000000 s hg38.chr4_KI270789v1_alt 171564 6 + 205944 GGAAGA s panTro5.chr4 192957640 6 + 194502333 GGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834173 6 + 195804263 GGAAGA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761878 6 + 115148730 GGAAGA i nomLeu3.chr7b I 241 T 515 s rheMac8.chr5 189045130 6 + 190429646 GGAAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988017 6 + 189454096 GGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379343 6 - 25927173 GGAAGA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929843 6 + 2368649 GGAAGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3872473 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=11436.000000 s hg38.chr4_KI270789v1_alt 171570 6 + 205944 GAGAGG s panTro5.chr4 192957646 6 + 194502333 GAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834179 6 + 195804263 GAGAGG i panPan2.chr4 C 0 C 0 s rheMac8.chr5 189045136 6 + 190429646 GAGAGG i rheMac8.chr5 C 0 T 120 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 120 s macNem1.NW_012013133v1 24379349 6 - 25927173 GAGAGG i macNem1.NW_012013133v1 C 0 T 120 s colAng1.NW_012116221v1 929849 6 + 2368649 GAGAGG i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365812 82 + 135778131 T e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761884 515 + 115148730 T e gorGor5.CYUI01015356v1 3872473 0 + 4876863 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=52643.000000 s hg38.chr4_KI270789v1_alt 171576 20 + 205944 GTTGTAGATTATCTGATGTG s panTro5.chr4 192957652 20 + 194502333 GTTGTAGATTATCTGATGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834185 20 + 195804263 GCATTACATTACCTGATGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872473 20 + 4876863 GCATTACATTACCTGACGTC i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189045022 20 + 190429646 GTTGTAGATTACCTGATGTC i rheMac8.chr5 T 120 C 0 s macFas5.chr5 187987909 20 + 189454096 GTTGTAGATTACCTGATGTC i macFas5.chr5 T 120 C 0 s macNem1.NW_012013133v1 24379235 20 - 25927173 GTTGTAGATTACCTGATGTC i macNem1.NW_012013133v1 T 120 C 0 s chlSab2.chr7 134365730 20 + 135778131 GTTGTAGATTACCTGATGTC i chlSab2.chr7 T 82 C 0 s colAng1.NW_012116221v1 929855 20 + 2368649 GTTGTAGATTACCTGATGTC i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e nomLeu3.chr7b 112761884 515 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=117048.000000 s hg38.chr4_KI270789v1_alt 171596 31 + 205944 CAAGTAGGAGGTAATCGCATAAGGTCCTGGA s panTro5.chr4 192957672 31 + 194502333 CAAGTAGGAGGTAATCACATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834205 31 + 195804263 CAAGTAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872493 31 + 4876863 CAAGTAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761369 31 + 115148730 CAAATAGGAGGTAATAGCATAAGGTCCTGGA i nomLeu3.chr7b T 515 I 119 s rheMac8.chr5 189045042 31 + 190429646 CACGTAGGAGGTGATAGCATAAGGTCCTGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987929 31 + 189454096 CACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379255 31 - 25927173 CACGTAGGAGGTGATAGCATAAGGTCCTGGA i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365750 31 + 135778131 CACGTAGGAGGTGATAGCGTAAGGTCCTGGA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929875 31 + 2368649 CACGTAGGAGGTGATAGCGTAAGGTCCTGGA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=34257.000000 s hg38.chr4_KI270789v1_alt 171627 9 + 205944 AGAGAGAGG s panTro5.chr4 192957703 9 + 194502333 AGAGAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834236 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872524 9 + 4876863 AGAGAGAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761519 9 + 115148730 AGAGAGAGG i nomLeu3.chr7b I 119 C 0 s rheMac8.chr5 189045073 9 + 190429646 AGAGAGAAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987960 9 + 189454096 AGAGAGAAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379286 9 - 25927173 AGAGAGAAG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365781 9 + 135778131 CGAGAGAGG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929906 9 + 2368649 AGAGAGAGG i colAng1.NW_012116221v1 C 0 T 120 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=17190.000000 s hg38.chr4_KI270789v1_alt 171636 4 + 205944 GTTG s panTro5.chr4 192957712 4 + 194502333 GTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834245 4 + 195804263 GTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872533 4 + 4876863 GTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761528 4 + 115148730 GTTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045082 4 + 190429646 GTTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987969 4 + 189454096 GTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379295 4 - 25927173 GTTG i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134365790 4 + 135778131 GTTG i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 929795 4 + 2368649 GTTG i colAng1.NW_012116221v1 T 120 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=135365.000000 s hg38.chr4_KI270789v1_alt 171640 50 + 205944 TAGATGACCTGATGTCCAAATGGGAGGTAATAGCTTAAGGTCCTGGAAGA s panTro5.chr4 192957716 50 + 194502333 TAGATGACCTGATGTCCAAATGGGAGGTAATAGTGTAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834249 50 + 195804263 TAGATTACATGATGTTCAAATAGAAGGTAACAGCATAAGGTCCTCAAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872537 50 + 4876863 TAGATTACATGATATTCAAATAGAAGGTAACAGCATAAGGTCCTGGAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761532 50 + 115148730 TGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGAAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045086 50 + 190429646 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i rheMac8.chr5 C 0 T 112 s macFas5.chr5 187987973 50 + 189454096 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379299 50 - 25927173 TAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGA i macNem1.NW_012013133v1 C 0 T 112 s chlSab2.chr7 134365794 50 + 135778131 TAGATTACCTGATGTCCACGTGGGAGGTGATAGCATAAGGTCCTGGGAGA i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=7524.000000 s hg38.chr4_KI270789v1_alt 171690 6 + 205944 CAAAGG s panTro5.chr4 192957766 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834299 6 + 195804263 CAAAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872587 6 + 4876863 CAAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761582 6 + 115148730 CAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 s chlSab2.chr7 134365844 6 + 135778131 CAGAGG i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1365.000000 s hg38.chr4_KI270789v1_alt 171696 1 + 205944 T s panTro5.chr4 192957772 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834305 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872593 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761588 1 + 115148730 T i nomLeu3.chr7b C 0 I 120 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=52463.000000 s hg38.chr4_KI270789v1_alt 171697 51 + 205944 GTTGTAGATTACCTGAAGTCCAAACAGGTGGTAATAGCATAAGGTCCTCGA s panTro5.chr4 192957773 51 + 194502333 GTTGTAGATTACCTGAAGTCCAAACAGGAGGTAATAGCATAAGGTCCTCGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834306 51 + 195804263 GTTGTAGATTACCTGATCTCCAAATAGGAGGAAATAGCATAAAGTCATGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3872594 51 + 4876863 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAATAGCATAAAGTCATGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 51 + 115148730 GCTGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b I 120 C 0 s macFas5.chr5 187987909 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=9178.000000 s hg38.chr4_KI270789v1_alt 171748 9 + 205944 AGACAAAGG s panTro5.chr4 192957824 9 + 194502333 AAACAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834357 9 + 195804263 AGAGAGAGG i panPan2.chr4 C 0 T 538 s gorGor5.CYUI01015356v1 3872645 9 + 4876863 AGAGAGAGG i gorGor5.CYUI01015356v1 C 0 T 1022 s nomLeu3.chr7b 112761760 9 + 115148730 AGACAAAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 9 + 189454096 AGAGAAAGG i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=13280.000000 s hg38.chr4_KI270789v1_alt 171757 15 + 205944 TGTTGTAGATTACCT s panTro5.chr4 192957833 15 + 194502333 TGTTGTAGATTACCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871632 15 + 4876863 TGTTGTAGATTACCT i gorGor5.CYUI01015356v1 T 1022 C 0 s nomLeu3.chr7b 112761769 15 + 115148730 TGTTGTAGATGACCT i nomLeu3.chr7b C 0 I 182 s macFas5.chr5 187987908 15 + 189454096 TGTTGTAGATTACCT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192834366 538 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=8206.000000 s hg38.chr4_KI270789v1_alt 171772 11 + 205944 GATTTCCAAAT s panTro5.chr4 192957848 11 + 194502333 GATGTCCAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871647 11 + 4876863 GATGTCCAAAT i gorGor5.CYUI01015356v1 C 0 I 2419 s nomLeu3.chr7b 112761966 11 + 115148730 GATGTCCAAAT i nomLeu3.chr7b I 182 C 0 s macFas5.chr5 187987923 11 + 189454096 GATGTCCACGT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192834366 538 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=21873.000000 s hg38.chr4_KI270789v1_alt 171783 30 + 205944 AAGAGGTCATAGCATAAGGTCCTGGAAGTC s panTro5.chr4 192957859 30 + 194502333 AGGAGGTGATAGCATAAGGTCCTGGAAGTC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874077 30 + 4876863 GGGAGGTAATAGCATAAGGTCCTGGAAGAC i gorGor5.CYUI01015356v1 I 2419 C 0 s nomLeu3.chr7b 112761977 30 + 115148730 AGGAGGTAATAGCATAAGGTCCGCGAAGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987934 30 + 189454096 AGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192834366 538 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=7936.000000 s hg38.chr4_KI270789v1_alt 171813 9 + 205944 AAAGGTGTT s panTro5.chr4 192957889 9 + 194502333 AAAGGTGTT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874107 9 + 4876863 AAAGATGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762007 9 + 115148730 AAAGGTGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987903 9 + 189454096 AAAGGTGTT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192834366 538 + 195804263 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=58468.000000 s hg38.chr4_KI270789v1_alt 171822 48 + 205944 GTAGATTACCTGATGTCCAAATAGGAGGTAATAGCAT-AAGGTTCTGGA s panTro5.chr4 192957898 48 + 194502333 GTAGATTACCTGATGTCCAAATAGGAGGTAATAGCAT-AAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833828 48 + 195804263 GTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCAT-AAGGTCCTCGA i panPan2.chr4 T 538 C 0 s gorGor5.CYUI01015356v1 3874116 48 + 4876863 GTAGATTACCTGATGTCCAAATAGGAGCTAATAGCAT-AAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 T 409 s nomLeu3.chr7b 112762016 49 + 115148730 GTAGATTACATGATGTCCAAGTAGGAGGTAATAGCATAAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987912 48 + 189454096 GTAGATTACCTGATGTCCACGTAGGAGGTGATAGCAT-AAGGTCCTGGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3398.000000 s hg38.chr4_KI270789v1_alt 171870 8 + 205944 TGACAAAG s panTro5.chr4 192957946 8 + 194502333 TGACAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833876 8 + 195804263 AGACAAAG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762065 8 + 115148730 AGAGAGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987960 8 + 189454096 AGAGAGAA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e gorGor5.CYUI01015356v1 3874164 409 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=-1909.000000 s hg38.chr4_KI270789v1_alt 171878 1 + 205944 -T s panTro5.chr4 192957954 1 + 194502333 -T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833884 1 + 195804263 -G i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112762073 1 + 115148730 -T i nomLeu3.chr7b C 0 T 843 s macFas5.chr5 187987907 1 + 189454096 G- i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e gorGor5.CYUI01015356v1 3874164 409 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=546.000000 s hg38.chr4_KI270789v1_alt 171879 1 + 205944 T s panTro5.chr4 192957955 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833885 1 + 195804263 T i panPan2.chr4 C 0 C 0 s macFas5.chr5 187987908 1 + 189454096 T i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e nomLeu3.chr7b 112762074 843 + 115148730 T e gorGor5.CYUI01015356v1 3874164 409 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1000.000000 s hg38.chr4_KI270789v1_alt 171880 1 + 205944 G s panTro5.chr4 192957956 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833886 1 + 195804263 G i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761231 1 + 115148730 G i nomLeu3.chr7b T 843 C 0 s macFas5.chr5 187987909 1 + 189454096 G i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e gorGor5.CYUI01015356v1 3874164 409 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=65549.000000 s hg38.chr4_KI270789v1_alt 171881 55 + 205944 TTGTAGGTTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAGAGA s panTro5.chr4 192957957 55 + 194502333 TTGTAGGTTACCGGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833887 55 + 195804263 TTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGAAGACA i panPan2.chr4 C 0 I 5022 s gorGor5.CYUI01015356v1 3873755 55 + 4876863 TTTTAGATTACCTGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGAAGAGA i gorGor5.CYUI01015356v1 T 409 C 0 s nomLeu3.chr7b 112761232 55 + 115148730 CTGTAGATGACCTGATGTCCAAGTAGGAGGTAATAGCATAAGCTCCTGGAAGAGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987910 55 + 189454096 TTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=476.000000 s hg38.chr4_KI270789v1_alt 171936 1 + 205944 G s panTro5.chr4 192958012 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873810 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 T 3994 s nomLeu3.chr7b 112761287 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987965 1 + 189454096 G i macFas5.chr5 C 0 T 57 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192833942 5022 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=600.000000 s hg38.chr4_KI270789v1_alt 171937 1 + 205944 G s panTro5.chr4 192958013 1 + 194502333 G i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869817 1 + 4876863 G i gorGor5.CYUI01015356v1 T 3994 C 0 s nomLeu3.chr7b 112761288 1 + 115148730 G i nomLeu3.chr7b C 0 I 300 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e macFas5.chr5 187987966 57 + 189454096 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192833942 5022 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1205.000000 s hg38.chr4_KI270789v1_alt 171938 2 + 205944 GC s panTro5.chr4 192958014 2 + 194502333 GC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869818 2 + 4876863 GC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761589 2 + 115148730 GT i nomLeu3.chr7b I 300 C 0 s macFas5.chr5 187987909 2 + 189454096 GT i macFas5.chr5 T 57 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 112 - 25927173 T e rheMac8.chr5 189045136 112 + 190429646 T e panPan2.chr4 192833942 5022 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=55412.000000 s hg38.chr4_KI270789v1_alt 171940 35 + 205944 TGTAGATTACCTCATGTCCATATAGGAGGTAATAT s panTro5.chr4 192958016 35 + 194502333 TGTAGATTACCTCATGTCCATATAGGAGGTAATAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3869820 35 + 4876863 TATAGATTACCTGATGTCCAAATAGTAGGTAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761591 35 + 115148730 TGTAGATTACCTGATGTCCAAATAGGACGTAATAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045024 35 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i rheMac8.chr5 T 112 C 0 s macFas5.chr5 187987911 35 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379237 35 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAG i macNem1.NW_012013133v1 T 112 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e panPan2.chr4 192833942 5022 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=46279.000000 s hg38.chr4_KI270789v1_alt 171975 22 + 205944 CGTAAGGTACTGGAAGAGAGAG s panTro5.chr4 192958051 22 + 194502333 CGTAAGGTGCTGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838964 22 + 195804263 GATAAGGTGCTGGAAGAGAGAC i panPan2.chr4 I 5022 C 0 s gorGor5.CYUI01015356v1 3869855 22 + 4876863 CATAAGGTGCTGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 I 4016 s nomLeu3.chr7b 112761626 22 + 115148730 CATGAGGTCCTGGAAGACAGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045059 22 + 190429646 CATAAGGTCCTGGAAGAGAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987946 22 + 189454096 CATAAGGTCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379272 22 - 25927173 CATAAGGTCCTGGAAGAGAGAA i macNem1.NW_012013133v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6563.000000 s hg38.chr4_KI270789v1_alt 171997 5 + 205944 GGCTT s panTro5.chr4 192958073 5 + 194502333 GGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838986 5 + 195804263 GGCTG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761648 5 + 115148730 GGCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045081 5 + 190429646 GGTTG i rheMac8.chr5 C 0 T 60 s macFas5.chr5 187987968 5 + 189454096 GGTTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379294 5 - 25927173 GGTTG i macNem1.NW_012013133v1 C 0 T 60 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929799 0 + 2368649 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3869877 4016 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=23283.000000 s hg38.chr4_KI270789v1_alt 172002 10 + 205944 TAGATTACCC s panTro5.chr4 192958078 10 + 194502333 TAGATTACCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838991 10 + 195804263 TAGATTACCT i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761653 10 + 115148730 TAGATTACAT i nomLeu3.chr7b C 0 I 121 s rheMac8.chr5 189045026 10 + 190429646 TAGATTACCT i rheMac8.chr5 T 60 C 0 s macFas5.chr5 187987973 10 + 189454096 TAGATTACCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379239 10 - 25927173 TAGATTACCT i macNem1.NW_012013133v1 T 60 C 0 s colAng1.NW_012116221v1 929799 10 + 2368649 TAGATTACCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3869877 4016 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=20475.000000 s hg38.chr4_KI270789v1_alt 172012 8 + 205944 GATGTCCA s panTro5.chr4 192958088 8 + 194502333 GATGTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839001 8 + 195804263 GATATCCA i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761784 8 + 115148730 GATGTCCA i nomLeu3.chr7b I 121 C 0 s rheMac8.chr5 189045036 8 + 190429646 GATGTCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987983 8 + 189454096 GATGTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379249 8 - 25927173 GATGTCCA i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929809 8 + 2368649 GATGTCCA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e gorGor5.CYUI01015356v1 3869877 4016 + 4876863 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=76043.000000 s hg38.chr4_KI270789v1_alt 172020 26 + 205944 AATAGGAGGTAATAGCATAAGGTCCT s panTro5.chr4 192958096 26 + 194502333 AATAGGAGGTAATAGCATAAGGTCCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839009 26 + 195804263 AATAGGAGGTAATAGCATAAGGTCCT i panPan2.chr4 C 0 T 5465 s gorGor5.CYUI01015356v1 3873893 26 + 4876863 AATAGGTGGTAATAGCATAAAGTCCT i gorGor5.CYUI01015356v1 I 4016 C 0 s nomLeu3.chr7b 112761792 26 + 115148730 AATAGGAGGTAATAGCATAAAGTCCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045044 26 + 190429646 CGTAGGAGGTGATAGCATAAGGTCCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187987991 26 + 189454096 CGTAGGAGGTGATAGCATAAGGTCCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379257 26 - 25927173 CGTAGGAGGTGATAGCATAAGGTCCT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929817 26 + 2368649 CGTAGGAGGTGATAGCATAAGGTCCT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=40614.000000 s hg38.chr4_KI270789v1_alt 172046 14 + 205944 GAAAGAGAGAGGGT s panTro5.chr4 192958122 14 + 194502333 GAAAGAGAGAGGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833570 14 + 195804263 GTAAGAGAGAGGGT i panPan2.chr4 T 5465 C 0 s gorGor5.CYUI01015356v1 3873919 14 + 4876863 GGAAGAGAGAGGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761818 14 + 115148730 TGGAGAGAGAGGGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045070 14 + 190429646 GGAAGAGAGAAGGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988017 14 + 189454096 GGAAGAGAGAGGGT i macFas5.chr5 C 0 T 60 s macNem1.NW_012013133v1 24379283 14 - 25927173 GGAAGAGAGAAGGT i macNem1.NW_012013133v1 C 0 C 0 s colAng1.NW_012116221v1 929843 14 + 2368649 GGAAGAGAGAGGGT i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=141817.000000 s hg38.chr4_KI270789v1_alt 172060 52 + 205944 TGTAGATTACATGATGTCCAAAGAGGAGGTAATAGCATAAGATCCTGGAA-GA s panTro5.chr4 192958136 52 + 194502333 TGTAGATTACATGATGTCCAAAGAGGAGGTAATAGCATAAGGTCCTGGAA-GA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833584 53 + 195804263 TGTAGATGACATGATGTCCAAAGAGGAGGTAATAGCATGAAGACCTGGAACAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873933 52 + 4876863 TATAGATTACGTGATGTCCAAACAGGAGGTGATAGCATAAGGTCCTGGAA-GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761832 52 + 115148730 TGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGGTCCTGGAA-GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045084 52 + 190429646 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA-GA i rheMac8.chr5 C 0 I 176 s macFas5.chr5 187987971 52 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA-GA i macFas5.chr5 T 60 C 0 s macNem1.NW_012013133v1 24379297 52 - 25927173 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAA-GA i macNem1.NW_012013133v1 C 0 I 176 s colAng1.NW_012116221v1 929857 52 + 2368649 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCGTAAGGTCCTGGAA-GA i colAng1.NW_012116221v1 C 0 I 6 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=6205.000000 s hg38.chr4_KI270789v1_alt 172112 6 + 205944 CAAAGG s panTro5.chr4 192958188 6 + 194502333 CAAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833637 6 + 195804263 CAAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873985 6 + 4876863 CAAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761884 6 + 115148730 CAAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988023 6 + 189454096 GAGAGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2865.000000 s hg38.chr4_KI270789v1_alt 172118 2 + 205944 TG s panTro5.chr4 192958194 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833643 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873991 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 T 2335 s nomLeu3.chr7b 112761890 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 2 + 189454096 TG i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=23674.000000 s hg38.chr4_KI270789v1_alt 172120 27 + 205944 TTGTAGATTACCTGATGTCCAAATAGG s panTro5.chr4 192958196 27 + 194502333 TTGTAGATTACCTGATGTCCAAATAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833645 27 + 195804263 TTGTAGATTGCCTGATGTCCAAATAGG i panPan2.chr4 C 0 C 0 s nomLeu3.chr7b 112761892 27 + 115148730 TTGTAGATTACCTGATGTCCAAATAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987910 27 + 189454096 TTGTAGATTACCTGATGTCCACGTAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e gorGor5.CYUI01015356v1 3873993 2335 + 4876863 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=12163.000000 s hg38.chr4_KI270789v1_alt 172147 11 + 205944 AGGAAATAGCA s panTro5.chr4 192958223 11 + 194502333 AGGAAATAGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833672 11 + 195804263 AGGAAATAGCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3871658 11 + 4876863 AGGAAATAGCA i gorGor5.CYUI01015356v1 T 2335 T 1631 s nomLeu3.chr7b 112761919 11 + 115148730 TGGTAATAGCA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987937 11 + 189454096 AGGTGATAGCA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=6440.000000 s hg38.chr4_KI270789v1_alt 172158 5 + 205944 TAAGG s panTro5.chr4 192958234 5 + 194502333 TAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833683 5 + 195804263 TAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870038 5 + 4876863 TAAGG i gorGor5.CYUI01015356v1 T 1631 C 0 s nomLeu3.chr7b 112761930 5 + 115148730 TAAGG i nomLeu3.chr7b C 0 T 121 s macFas5.chr5 187987948 5 + 189454096 TAAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=16383.000000 s hg38.chr4_KI270789v1_alt 172163 15 + 205944 CCATGGAAGAGAGAG s panTro5.chr4 192958239 15 + 194502333 CCATGGAAGAGAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833688 15 + 195804263 TCATGGAAGAGAGAG i panPan2.chr4 C 0 I 7068 s gorGor5.CYUI01015356v1 3870043 15 + 4876863 CCATGGAAGAGAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761814 15 + 115148730 TCCTTGGAGAGAGAG i nomLeu3.chr7b T 121 C 0 s macFas5.chr5 187987953 15 + 189454096 TCCTGGAAGAGAGAA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=45020.000000 s hg38.chr4_KI270789v1_alt 172178 45 + 205944 CGTTGTAGATTACCTGATTTCTAAATAGGAGGTAATACTATAAGC s panTro5.chr4 192958254 45 + 194502333 CGTTGTAGATTACCTGATTTCTTAATAGGAGGTAATACTATAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840771 45 + 195804263 CGTTGTAGATTACCTGATTTCTTAATAGGAGGTAATACTATAAGC i panPan2.chr4 I 7068 C 0 s gorGor5.CYUI01015356v1 3870058 45 + 4876863 CATTGTAGATTACCCGATGTCCATATAGGAGGTAATACCATAAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761829 45 + 115148730 GGTTGTAGATTACCTGATGTCCAAATTGCAGATAATAGCATAAGG i nomLeu3.chr7b C 0 I 61 s macFas5.chr5 187987968 45 + 189454096 GGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=11201.000000 s hg38.chr4_KI270789v1_alt 172223 13 + 205944 TCCGGGAAGATAC s panTro5.chr4 192958299 13 + 194502333 TCCGGGAAGATAC i panTro5.chr4 C 0 T 883 s panPan2.chr4 192840816 13 + 195804263 TCCGGGAAGATAC i panPan2.chr4 C 0 T 7068 s gorGor5.CYUI01015356v1 3870103 13 + 4876863 TCCTGGAACATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761935 13 + 115148730 TCCGCGAAGAGAA i nomLeu3.chr7b I 61 C 0 s macFas5.chr5 187988013 13 + 189454096 TCCTGGAAGAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=2010.000000 s hg38.chr4_KI270789v1_alt 172236 3 + 205944 AGG s panPan2.chr4 192833761 3 + 195804263 AGG i panPan2.chr4 T 7068 C 0 s gorGor5.CYUI01015356v1 3870116 3 + 4876863 AGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761948 3 + 115148730 AGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988026 3 + 189454096 AGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panTro5.chr4 192958312 883 + 194502333 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=3730.000000 s hg38.chr4_KI270789v1_alt 172239 4 + 205944 TGTT s panPan2.chr4 192833764 4 + 195804263 TGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3870119 4 + 4876863 TGTT i gorGor5.CYUI01015356v1 C 0 I 3207 s nomLeu3.chr7b 112761951 4 + 115148730 TGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 4 + 189454096 TGTT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panTro5.chr4 192958312 883 + 194502333 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=5640.000000 s hg38.chr4_KI270789v1_alt 172243 6 + 205944 GTAGAT s panPan2.chr4 192833768 6 + 195804263 GTAGAT i panPan2.chr4 C 0 I 662 s gorGor5.CYUI01015356v1 3873330 6 + 4876863 GTAGAT i gorGor5.CYUI01015356v1 I 3207 C 0 s nomLeu3.chr7b 112761955 6 + 115148730 GTAGAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987912 6 + 189454096 GTAGAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panTro5.chr4 192958312 883 + 194502333 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4437.000000 s hg38.chr4_KI270789v1_alt 172249 6 + 205944 TACCTT s panPan2.chr4 192834436 6 + 195804263 TACCTG i panPan2.chr4 I 662 C 0 s gorGor5.CYUI01015356v1 3873336 6 + 4876863 TACCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761961 6 + 115148730 TACCTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987918 6 + 189454096 TACCTG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panTro5.chr4 192958312 883 + 194502333 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=39996.000000 s hg38.chr4_KI270789v1_alt 172255 36 + 205944 ATGTCCAAATAGGAGTTAATAGCATAAGGTCCTGCA s panTro5.chr4 192957429 36 + 194502333 ATGTCCAAATAGCAGGTAATAGCATAATGTCCTGGA i panTro5.chr4 T 883 C 0 s panPan2.chr4 192834442 36 + 195804263 ATGTCCAAATAGAAGGTAATAGCATAAGGCCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873342 36 + 4876863 ATGTCCAAACAGGAGTTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761967 36 + 115148730 ATGTCCAAATAGGAGGTAATAGCATAAGGTCCGCGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987924 36 + 189454096 ATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=7690.000000 s hg38.chr4_KI270789v1_alt 172291 10 + 205944 AGACAAAGGT s panTro5.chr4 192957465 8 + 194502333 AGAGAGGG-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834478 10 + 195804263 AGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873378 10 + 4876863 AGACAAAGGT i gorGor5.CYUI01015356v1 C 0 T 61 s nomLeu3.chr7b 112762003 10 + 115148730 AGAGAAAGGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=312.000000 s hg38.chr4_KI270789v1_alt 172301 2 + 205944 TT s panTro5.chr4 192957473 1 + 194502333 -C i panTro5.chr4 C 0 T 1263 s panPan2.chr4 192834488 2 + 195804263 GT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873327 2 + 4876863 TT i gorGor5.CYUI01015356v1 T 61 C 0 s nomLeu3.chr7b 112762013 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987909 2 + 189454096 GT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=42045.000000 s hg38.chr4_KI270789v1_alt 172303 38 + 205944 TGTAGATTACCTGATGTCCAAATAGGAGGTAATAGTAT s panTro5.chr4 192956211 38 + 194502333 TGTAAATTACCTGATGTCCAAATAGGAGGTAATATCAT i panTro5.chr4 T 1263 C 0 s panPan2.chr4 192834490 38 + 195804263 TATAGATTACCTGATGACTAAATAGGAGATAATAGCAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873329 38 + 4876863 TGTAGATTACCTTATGTCCAAACAGGAGTTAATAGCAT i gorGor5.CYUI01015356v1 C 0 I 244 s nomLeu3.chr7b 112762015 38 + 115148730 TGTAGATTACATGATGTCCAAGTAGGAGGTAATAGCAT i nomLeu3.chr7b C 0 T 61 s macFas5.chr5 187987911 38 + 189454096 TGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=18475.000000 s hg38.chr4_KI270789v1_alt 172341 18 + 205944 AAGGTCCTGGAAGACAAA s panTro5.chr4 192956249 18 + 194502333 AAGGTGCTGGAAGAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834528 18 + 195804263 AAGGTCCTTGAAGAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873611 18 + 4876863 AAGGTCCTGGAAGACAAA i gorGor5.CYUI01015356v1 I 244 C 0 s nomLeu3.chr7b 112761992 18 + 115148730 AAGGTCCGCGAAGAGAAA i nomLeu3.chr7b T 61 C 0 s macFas5.chr5 187987949 18 + 189454096 AAGGTCCTGGAAGAGAGA i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=7270.000000 s hg38.chr4_KI270789v1_alt 172359 12 + 205944 GATGTTTTAGAA s panTro5.chr4 192956267 11 + 194502333 GG-GATTTAGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834546 12 + 195804263 GATGTTCTGGAT i panPan2.chr4 C 0 T 784 s gorGor5.CYUI01015356v1 3873629 12 + 4876863 AGCGTTGTAGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762010 12 + 115148730 GGTGTTGTAGAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987906 12 + 189454096 GGTGTTGTAGAT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=39640.000000 s hg38.chr4_KI270789v1_alt 172371 31 + 205944 TACCTGATGTCCAAGTAGGAGGTAATAGCAT s panTro5.chr4 192956278 31 + 194502333 AACCTGATGTCCAAGTAGGAGGTAATAGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833774 31 + 195804263 TACCTGATGTCCAAATAGGAGGTAATAGCAT i panPan2.chr4 T 784 C 0 s gorGor5.CYUI01015356v1 3873641 31 + 4876863 TACCTGATGTCCAAGTAGGAGGTAATAGCAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762022 31 + 115148730 TACATGATGTCCAAGTAGGAGGTAATAGCAT i nomLeu3.chr7b C 0 T 645 s macFas5.chr5 187987918 31 + 189454096 TACCTGATGTCCACGTAGGAGGTGATAGCAT i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=13159.000000 s hg38.chr4_KI270789v1_alt 172402 18 + 205944 AAGGTCCTGGAAGACAAA s panTro5.chr4 192956309 18 + 194502333 AAGGTCTTGGAAGAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833805 18 + 195804263 AAGGTCCTGGAAGACGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873672 18 + 4876863 AAGGTCCTGGAAGACAAA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987949 18 + 189454096 AAGGTCCTGGAAGAGAGA i macFas5.chr5 C 0 I 20 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112762053 645 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=-170.000000 s hg38.chr4_KI270789v1_alt 172420 4 + 205944 GATG s panTro5.chr4 192956327 3 + 194502333 GGT- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833823 4 + 195804263 AGTG i panPan2.chr4 C 0 I 543 s gorGor5.CYUI01015356v1 3873690 4 + 4876863 AGTG i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987967 20 + 189454096 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112762053 645 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=1326.000000 s hg38.chr4_KI270789v1_alt 172424 3 + 205944 TTG s panTro5.chr4 192956330 3 + 194502333 TTG i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873694 3 + 4876863 TTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761408 3 + 115148730 CTG i nomLeu3.chr7b T 645 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987967 20 + 189454096 I e rheMac8.chr5 189045136 176 + 190429646 I e panPan2.chr4 192833827 543 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=9329.000000 s hg38.chr4_KI270789v1_alt 172427 14 + 205944 TAGATTACCTGATT s panTro5.chr4 192956333 14 + 194502333 TAGATATCATGATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834370 14 + 195804263 TAGATTACCTGATG i panPan2.chr4 I 543 C 0 s gorGor5.CYUI01015356v1 3873697 14 + 4876863 TAGATTACCTGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761411 14 + 115148730 TAGATTACCTGATG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987967 20 + 189454096 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=21140.000000 s hg38.chr4_KI270789v1_alt 172441 22 + 205944 TCCAAATAGGAGGTAGTAGCAG s panTro5.chr4 192956347 22 + 194502333 TTCTAATAGAAGGTAACAGCAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834384 22 + 195804263 TCCAAATAGAAGGTAATACCGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873711 22 + 4876863 TCCAAATAGGAGGTAATAGCAG i gorGor5.CYUI01015356v1 C 0 T 366 s nomLeu3.chr7b 112761425 22 + 115148730 TCCAAATAGGAGGTAACAGCAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987987 22 + 189454096 TCCACGTAGGAGGTGATAGCAT i macFas5.chr5 I 20 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=20115.000000 s hg38.chr4_KI270789v1_alt 172463 16 + 205944 AAGGTCCTGGAAGACA s panTro5.chr4 192956369 16 + 194502333 AAGGTCCTGGAAGGCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834406 16 + 195804263 AAGGTCCTGTAAGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873367 16 + 4876863 AAGGTCCTGGAAGACA i gorGor5.CYUI01015356v1 T 366 C 0 s nomLeu3.chr7b 112761447 16 + 115148730 AAGGTCCTGGAAGACA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988009 16 + 189454096 AAGGTCCTGGAAGAGA i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=6070.000000 s hg38.chr4_KI270789v1_alt 172479 5 + 205944 AAGGT s panTro5.chr4 192956385 5 + 194502333 AAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192834422 5 + 195804263 CAGGT i panPan2.chr4 C 0 T 1211 s gorGor5.CYUI01015356v1 3873383 5 + 4876863 AAGGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761463 5 + 115148730 AAGGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987904 5 + 189454096 AAGGT i macFas5.chr5 T 121 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=38228.000000 s hg38.chr4_KI270789v1_alt 172484 34 + 205944 GTTTTAGATTACCTGATGTCCAAGTAGGAGGTAC s panTro5.chr4 192956390 34 + 194502333 ATTGTAGATTACCTGATGTCCAAATAGGAGGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833216 34 + 195804263 GTTGTAGATGACCTGATGTGCAAATGGGAGGTAA i panPan2.chr4 T 1211 C 0 s gorGor5.CYUI01015356v1 3873388 34 + 4876863 GTTTTAGATTACCTGATGTCCAAGTAGGAGGTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761468 34 + 115148730 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAA i nomLeu3.chr7b C 0 T 99 s macFas5.chr5 187987909 34 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=18190.000000 s hg38.chr4_KI270789v1_alt 172518 22 + 205944 TAGCATAAGGTCCTGGAAGACA s panTro5.chr4 192956424 22 + 194502333 TAGCATAAAGTCATGGAAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833250 22 + 195804263 TAGCATAAGGTCCTGGAAGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873422 22 + 4876863 TAGCATAAGGTCCTGGAAGACA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987943 22 + 189454096 TAGCATAAGGTCCTGGAAGAGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761502 99 + 115148730 T e otoGar3.GL873580 11281724 393 - 11315646 I a score=4004.000000 s hg38.chr4_KI270789v1_alt 172540 4 + 205944 AAGG s panTro5.chr4 192956446 4 + 194502333 GAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833272 4 + 195804263 AAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873444 4 + 4876863 AAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761403 4 + 115148730 GAGG i nomLeu3.chr7b T 99 C 0 s macFas5.chr5 187987965 4 + 189454096 GAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=59563.000000 s hg38.chr4_KI270789v1_alt 172544 52 + 205944 TGTTGTAGATTACCTGATTTCCAAATAGGAGGTAATAGCAGAAGGTCCTGGA s panTro5.chr4 192956450 51 + 194502333 -GTTGTCGATTACCTGATGTCCAAATAGGAGGTAATACCGTAAGGTCCTGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833276 52 + 195804263 TGTTGTAGATTACCTGAAGTCCAAATAGGAGGTAACAGCATAAGGTCCTTGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873448 52 + 4876863 TGTTGTAGATTACCTGATTTCCAAATAGAAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761407 51 + 115148730 -GCTGTAGATTACCTGATGTCCAAATAGGAGGTAACAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=74413.000000 s hg38.chr4_KI270789v1_alt 172596 61 + 205944 AGACAAAGGTGTTTTAGATTACCTGATGTCCAAGTAGGAGGTAATAGCGTAAGGTCCTGGA s panTro5.chr4 192956501 61 + 194502333 AGACACAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGATCCTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833328 61 + 195804263 AGACAAAGGTGTTGTAGATTGCCTGGTGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873500 61 + 4876863 AGACAAAGGTTTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761458 61 + 115148730 AGACAAAGGTGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 61 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=69697.000000 s hg38.chr4_KI270789v1_alt 172657 61 + 205944 AGACAAAGTTGTTGTAGATTACCTGGTGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192956562 61 + 194502333 AGACCAAGTTGTTGTAGATTACCTGATGTCCAAATAGGAGGGAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833389 61 + 195804263 AGACAAAGGTGTTGTAGATTGCCTGGTGTCCAAATAGGAGGAAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873561 61 + 4876863 AGATAAAGTTGTTGTAGATTACCTGGTGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761519 60 + 115148730 AGAGAGAGG-GTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 61 + 189454096 AGAGAAAGGTGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=12496.000000 s hg38.chr4_KI270789v1_alt 172718 13 + 205944 AGACAGAAGTGTT s panTro5.chr4 192956623 13 + 194502333 AGATATAGGTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833450 13 + 195804263 AGACAAAGGTGTT i panPan2.chr4 C 0 I 365 s gorGor5.CYUI01015356v1 3873622 13 + 4876863 AGACAAAAGCGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761579 13 + 115148730 AGACAAAGGTGTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987899 13 + 189454096 AGAGAAAGGTGTT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=60133.000000 s hg38.chr4_KI270789v1_alt 172731 52 + 205944 G-TAGATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAC s panTro5.chr4 192956636 53 + 194502333 GTTACATTACCTGATATCCAAATAGGAGGTAATAGCATAAGGTCCTCGAAGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833828 52 + 195804263 -GTAGATTACCTGATGTCCAAATAGGAGGTAAGAGCATAAGGTCCTCGAAGAC i panPan2.chr4 I 365 C 0 s gorGor5.CYUI01015356v1 3873635 52 + 4876863 -GTAGATTACCTGATGTCCAAGTAGGAGGTAATAGCATAAGGTCCTGGAAGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761592 52 + 115148730 -GTAGATTACCTGATGTCCAAATAGGACGTAATAGCATGAGGTCCTGGAAGAC i nomLeu3.chr7b C 0 I 60 s macFas5.chr5 187987912 52 + 189454096 -GTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGAAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=4223.000000 s hg38.chr4_KI270789v1_alt 172783 5 + 205944 AAAAG s panTro5.chr4 192956689 5 + 194502333 AAAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833880 5 + 195804263 AAAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873687 5 + 4876863 AAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761704 5 + 115148730 AGACG i nomLeu3.chr7b I 60 T 182 s macFas5.chr5 187987964 5 + 189454096 AGAAG i macFas5.chr5 C 0 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=62151.000000 s hg38.chr4_KI270789v1_alt 172788 52 + 205944 TGTTGTAGATTACCTGATTTCCAAATAGGAGGTAATAGCAGAAGGTCCCGGA s panTro5.chr4 192956694 52 + 194502333 TGTTGTAGACTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833885 52 + 195804263 TGTTGTAGATTACCCGATGTCCAAATAGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873692 52 + 4876863 TGTTGTAGATTACCTGATTTCCAAATAGGAGGTAATAGCAGAAGGTCCCGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761527 52 + 115148730 GGTTGTGGATGACCTGATGTCCAAATAGGAGGTAACAGCATAGGGTCCTGGA i nomLeu3.chr7b T 182 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 61 T 61 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=12008.000000 s hg38.chr4_KI270789v1_alt 172840 10 + 205944 AGACAAAAGT s panTro5.chr4 192956746 10 + 194502333 AGACAAAGGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833937 10 + 195804263 AGACAAAGGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873744 10 + 4876863 AGACAAAAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761579 10 + 115148730 AGACAAAGGT i nomLeu3.chr7b C 0 I 120 s macFas5.chr5 187987899 10 + 189454096 AGAGAAAGGT i macFas5.chr5 T 61 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=46516.000000 s hg38.chr4_KI270789v1_alt 172850 51 + 205944 GTTTTAGATTACCTGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA s panTro5.chr4 192956756 37 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAG-------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192833947 51 + 195804263 GTTGTAGATTACGTGATGTCCAAATAGGAGGAAATAGCGTAAGGTCTTAGA i panPan2.chr4 C 0 I 4447 s gorGor5.CYUI01015356v1 3873754 51 + 4876863 GTTTTAGATTACCTGATGTCCAAATAGGAGGTAATAGAATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761709 51 + 115148730 GCTGTAGATTACATGATATCCAAATTGCAGATAATAGCATAAGGTCCTCAA i nomLeu3.chr7b I 120 C 0 s macFas5.chr5 187987909 51 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1692.000000 s hg38.chr4_KI270789v1_alt 172901 3 + 205944 AGA s gorGor5.CYUI01015356v1 3873805 3 + 4876863 AGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761760 3 + 115148730 AGA i nomLeu3.chr7b C 0 T 568 s macFas5.chr5 187987960 3 + 189454096 AGA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panPan2.chr4 192833998 4447 + 195804263 I e panTro5.chr4 192956793 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=573.000000 s hg38.chr4_KI270789v1_alt 172904 2 + 205944 GA s gorGor5.CYUI01015356v1 3873808 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987963 2 + 189454096 GA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761763 568 + 115148730 T e panPan2.chr4 192833998 4447 + 195804263 I e panTro5.chr4 192956793 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=600.000000 s hg38.chr4_KI270789v1_alt 172906 1 + 205944 G s panPan2.chr4 192838445 1 + 195804263 G i panPan2.chr4 I 4447 C 0 s gorGor5.CYUI01015356v1 3873810 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987965 1 + 189454096 G i macFas5.chr5 C 0 T 57 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761763 568 + 115148730 T e panTro5.chr4 192956793 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=-128.000000 s hg38.chr4_KI270789v1_alt 172907 1 + 205944 G s panPan2.chr4 192838446 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873811 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987966 57 + 189454096 T e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761763 568 + 115148730 T e panTro5.chr4 192956793 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=10804.000000 s hg38.chr4_KI270789v1_alt 172908 24 + 205944 GCTGTAGTTTACCTGATGTCCAAA s panPan2.chr4 192838447 24 + 195804263 GTTGTAGATTACCTGATGTCCAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873812 24 + 4876863 GCTGTAGCTTACCTGGTGTCCAAA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987909 24 + 189454096 GTTGTAGATTACCTGATGTCCACG i macFas5.chr5 T 57 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761763 568 + 115148730 T e panTro5.chr4 192956793 0 + 194502333 C e otoGar3.GL873580 11281724 393 - 11315646 I a score=9561.000000 s hg38.chr4_KI270789v1_alt 172932 14 + 205944 TGGGAGGTAATATC s panTro5.chr4 192956793 1 + 194502333 -------------C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838471 14 + 195804263 TAGGAGGTAATAGC i panPan2.chr4 C 0 I 480 s gorGor5.CYUI01015356v1 3873836 14 + 4876863 TAGGAGGTAATATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761195 14 + 115148730 TAGGAGGTAATAGC i nomLeu3.chr7b T 568 C 0 s macFas5.chr5 187987933 14 + 189454096 TAGGAGGTGATAGC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=52080.000000 s hg38.chr4_KI270789v1_alt 172946 43 + 205944 ATAAGGTGCTGGAAAAGAGAGGGCTGTAGATTACCTGATGTCC s panTro5.chr4 192956794 43 + 194502333 ATAAGGTGCTGGAAGAGAGAGGGCTGTAGATTACCTGATATCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192838965 43 + 195804263 ATAAGGTGCTGGAAGAGAGACGGCTGTAGATTACCTGATATCC i panPan2.chr4 I 480 I 119 s gorGor5.CYUI01015356v1 3873850 43 + 4876863 ATAAGGTGCTGGAAAAGAGAGGGCTGTAGATTACCTGATGTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761209 43 + 115148730 ATAAGATACAAGAAGAGAGAGGGCTGTAGATGACCTGATGTCC i nomLeu3.chr7b C 0 I 633 s macFas5.chr5 187987947 43 + 189454096 ATAAGGTCCTGGAAGAGAGAAGGTTGTAGATTACCTGATGTCC i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 172989 1 + 205944 A s panTro5.chr4 192956837 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839127 1 + 195804263 A i panPan2.chr4 I 119 C 0 s gorGor5.CYUI01015356v1 3873893 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987990 1 + 189454096 A i macFas5.chr5 C 0 T 59 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761252 633 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=21129.000000 s hg38.chr4_KI270789v1_alt 172990 31 + 205944 ATA-GGTGGTAATAGCATAAAGTCCTGGAAGA s panTro5.chr4 192956838 32 + 194502333 AAAAGGAGGTAATACCATAAGGTCCTGGAAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839128 31 + 195804263 ATA-GGACGTAAGAGCATAAGGTCCTGGAAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3873894 31 + 4876863 ATA-GGTGGTAATAGCATAAAGTCCTGGAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 187987932 31 + 189454096 GTA-GGAGGTGATAGCATAAGGTCCTGGAAGA i macFas5.chr5 T 59 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e nomLeu3.chr7b 112761252 633 + 115148730 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=27448.000000 s hg38.chr4_KI270789v1_alt 173021 32 + 205944 GAGAGGGTTGTAGATTACATGATGTCCAAATA s panTro5.chr4 192956870 30 + 194502333 GAG--GGTTGTAGATTACGTGATGTCCAATTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192839159 31 + 195804263 GAGAGGGTTGTAGATTACCCGATTTCCAATA- i panPan2.chr4 C 0 I 1639 s gorGor5.CYUI01015356v1 3873925 32 + 4876863 GAGAGGGTTATAGATTACGTGATGTCCAAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761885 32 + 115148730 AAAAGTGTTGTAGATTACCTGATGTCCAAATA i nomLeu3.chr7b I 633 C 0 s macFas5.chr5 187987963 32 + 189454096 GAGAAGGTTGTAGATTACCTGATGTCCACGTA i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=22207.000000 s hg38.chr4_KI270789v1_alt 173053 31 + 205944 GGAGGTAATAGCATAAGGTCATGGAAGACAA s panTro5.chr4 192956900 31 + 194502333 GGAGGTAATAGCATAAGGTCCTCGACGACAA i panTro5.chr4 C 0 I 1381 s gorGor5.CYUI01015356v1 3873957 31 + 4876863 GGAGGTGATAGCATAAGGTCCTGGAAGACAA i gorGor5.CYUI01015356v1 C 0 I 60 s nomLeu3.chr7b 112761917 31 + 115148730 GGTGGTAATAGCATAAGGTCCGCGAAGAGAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987995 31 + 189454096 GGAGGTGATAGCATAAGGTCCTGGAAGAGAG i macFas5.chr5 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e panPan2.chr4 192839190 1639 + 195804263 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=3240.000000 s hg38.chr4_KI270789v1_alt 173084 3 + 205944 AGG s panTro5.chr4 192958312 3 + 194502333 AGG i panTro5.chr4 I 1381 C 0 s panPan2.chr4 192840829 3 + 195804263 AGG i panPan2.chr4 I 1639 C 0 s gorGor5.CYUI01015356v1 3874048 3 + 4876863 AGG i gorGor5.CYUI01015356v1 I 60 C 0 s nomLeu3.chr7b 112761948 3 + 115148730 AGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988026 3 + 189454096 AGG i macFas5.chr5 C 0 T 121 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=63756.000000 s hg38.chr4_KI270789v1_alt 173087 52 + 205944 TGTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA s panTro5.chr4 192958315 52 + 194502333 TGTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840832 52 + 195804263 TGTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874051 52 + 4876863 TGTTGTAGATTACGTGATGTGCAACTGGGAGGTAATAGCATAAGGTCCTGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112761951 52 + 115148730 TGTTGTAGATTACCTGATGTCCAAATAGGAGGTAATAGCATAAGGTCCGCGA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987908 52 + 189454096 TGTTGTAGATTACCTGATGTCCACGTAGGAGGTGATAGCATAAGGTCCTGGA i macFas5.chr5 T 121 I 9 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=6367.000000 s hg38.chr4_KI270789v1_alt 173139 9 + 205944 AGACAGAGA s panTro5.chr4 192958367 9 + 194502333 AGACAGAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840884 9 + 195804263 AGACAGAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874103 9 + 4876863 AGACAAAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762003 9 + 115148730 AGAGAAAGG i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e manLeu1.NW_012102221v1 2832676 0 - 2847728 C e chlSab2.chr7 134365850 0 + 135778131 C e cerAty1.NW_012001672v1 3408831 0 + 4669795 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987960 9 + 189454096 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1911.000000 s hg38.chr4_KI270789v1_alt 173148 1 + 205944 T s panTro5.chr4 192958376 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840893 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874112 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762012 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3408831 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832676 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e chlSab2.chr7 134365850 0 + 135778131 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e macFas5.chr5 187987960 9 + 189454096 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=78061.000000 s hg38.chr4_KI270789v1_alt 173149 34 + 205944 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAA s panTro5.chr4 192958377 34 + 194502333 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840894 34 + 195804263 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874113 34 + 4876863 GTTGTAGATTACCTGATGTCCAAATAGGAGCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762013 34 + 115148730 GTTGTAGATTACATGATGTCCAAGTAGGAGGTAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187987969 34 + 189454096 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGA i macFas5.chr5 I 9 C 0 s cerAty1.NW_012001672v1 3408832 34 + 4669795 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832677 34 - 2847728 GTTGTAGATTACCTGATGTCCACGTAGGAGGTGA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189661790 1 - 190850796 I e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e saiBol1.JH378165 13154339 0 - 14256875 C e colAng1.NW_012116221v1 929909 6 + 2368649 I e chlSab2.chr7 134365850 0 + 135778131 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=28602.000000 s hg38.chr4_KI270789v1_alt 173183 8 + 205944 TAGCAT-AA s panTro5.chr4 192958411 8 + 194502333 TAGCAT-AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840928 8 + 195804263 TAGCAT-AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874147 8 + 4876863 TAGCAT-AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762047 9 + 115148730 TAGCATAAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988003 8 + 189454096 TAGCAT-AA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3408866 8 + 4669795 TAGCAT-AA i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832711 8 - 2847728 TAGCAT-AA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189661791 8 - 190850796 TGGCAT-AA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13154339 8 - 14256875 TAGCAT-AA i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e mm10.chr8 86647469 79 - 129401213 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e colAng1.NW_012116221v1 929909 6 + 2368649 I e chlSab2.chr7 134365850 0 + 135778131 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=65914.000000 s hg38.chr4_KI270789v1_alt 173191 18 + 205944 GGTCCTGGAAGAGAGTGT s panTro5.chr4 192958419 18 + 194502333 GGTCCTGGAAGAGAGTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840936 18 + 195804263 GGTCCTGGAAGAGAGTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874155 18 + 4876863 GGTCCTGGAAAAGAGTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762056 18 + 115148730 GGTCCTGGAAGAGAGAAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988011 18 + 189454096 GGTCCTGGAAGAGAGAGG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3408874 18 + 4669795 GGTCCTGGAAGAGAGAGG i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2832719 18 - 2847728 GGTCCTGGAAGAGAGAGG i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189661799 18 - 190850796 GGTCCTTGAAGACAGAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154347 18 - 14256875 GGTCTTCGGAGAGAGAGG i saiBol1.JH378165 C 0 C 0 s mm10.chr8 86647548 18 - 129401213 GGTCCTGTAGGGGAGAAG i mm10.chr8 I 79 C 0 e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e colAng1.NW_012116221v1 929909 6 + 2368649 I e chlSab2.chr7 134365850 0 + 135778131 C e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=129502.000000 s hg38.chr4_KI270789v1_alt 173209 25 + 205944 GTGTTCCAGTCAGAAGGAGCTATTG s panTro5.chr4 192958437 25 + 194502333 GTGTTCCAGTCAGAAGGAGCCATTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840954 25 + 195804263 GTGTTCCAGTCAGAAGGAGCCATTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874173 25 + 4876863 GTGTTCCAGTCAGAAGGAGCCATTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762074 25 + 115148730 GTGTTCCAGTCAGAGGGAGCCATTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988029 25 + 189454096 GTGTTCCAGTCAGCGGAAGCCATTG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3408892 25 + 4669795 GTGTTCCAGTCAGCGGGAGCCATTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365850 25 + 135778131 GTGTTCCAGTCAGTGGGAGCCATTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832737 25 - 2847728 GTGTTCCAGTCAGCGGGAGCCATTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929915 25 + 2368649 ATGTTCCAGTCAGTGGGAGCCATTG i colAng1.NW_012116221v1 I 6 C 0 s calJac3.chr3 189661817 25 - 190850796 ATGCTCCAGTCGGAGGCCGCCACTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154365 25 - 14256875 ACGTTCCAGTCAGAGGCAGCCACTG i saiBol1.JH378165 C 0 I 467 s mm10.chr8 86647566 21 - 129401213 GTATTCAGGTAACAGGGAGCT---- i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=67104.000000 s hg38.chr4_KI270789v1_alt 173234 14 + 205944 GTTCAGGATAGCTG s panTro5.chr4 192958462 14 + 194502333 GTTCAGGTTAGCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840979 14 + 195804263 ATTCAGGTTAGCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874198 14 + 4876863 GTTCAGGATAGCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762099 14 + 115148730 GTTCAGGATGGCTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988054 14 + 189454096 GTTCAGGATGACCA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3408917 14 + 4669795 GTTCAGGATGACTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365875 14 + 135778131 GTTCAGGATGACTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832762 14 - 2847728 GTTCAGGATGACTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929940 14 + 2368649 GTTCAGGATGACTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661842 13 - 190850796 GCTCAGGATGGCT- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154857 14 - 14256875 GCTCAGGATGGCTG i saiBol1.JH378165 I 467 C 0 s mm10.chr8 86647587 11 - 129401213 ---CAAGACCACTG i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e aotNan1.NW_018492112v1 3432400 356 - 5030052 I e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=48292.000000 s hg38.chr4_KI270789v1_alt 173248 10 + 205944 CAACATACAT----- s panTro5.chr4 192958476 10 + 194502333 CAACATACAT----- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192840993 10 + 195804263 CAACATACAT----- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874212 10 + 4876863 CAACATACAT----- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762113 10 + 115148730 CAACATACAT----- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988068 10 + 189454096 CAACACACAT----- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3408931 10 + 4669795 CAACACACAT----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134365889 10 + 135778131 CAACATACAT----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832776 10 - 2847728 CAACACACAT----- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 929954 10 + 2368649 CAACACACGT----- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661855 10 - 190850796 CAAGGTGCAT----- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13154871 10 - 14256875 TGACATGCAT----- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3432756 10 - 5030052 CAACATGCAT----- i aotNan1.NW_018492112v1 I 356 C 0 s mm10.chr8 86647598 10 - 129401213 -----TAAGTGGTCT i mm10.chr8 C 0 C 0 e cebCap1.NW_016107886v1 1044759 1809 - 2196201 I e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=829447.000000 s hg38.chr4_KI270789v1_alt 173258 120 + 205944 TTAGTCATTATGA--TGGAAAACTG---ATAATGGAGTTAGGCCTGATGTTGAGATGTATAATTGAAGAAGAGTGAG-AGGATCACCTTTCAATTCACAAAGATCATCATAGGGCCAGTATAAAAG s panTro5.chr4 192958486 120 + 194502333 TTAGTCATTACGA--TGGAAAACTG---ATAATGGAGTTAGGCCTGATGTTGAGATGTATAACTGAAGAAGAGTGAG-AGGATCACCTTTCAATTTACAAAGATCATCATAGGGCCAGTATAAAAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841003 120 + 195804263 TTAGTCATTACGA--TGGAAAACTG---ATAATGGAGTTAGGCCTGATGTTGAGATGTATAACTGAAGAAGAGTGAG-AGGATCACCTTTCAATTTACAAAGATCATCATAGGGCCAGTATAAAAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874222 120 + 4876863 TTAGTCATTATGA--TGGAAAACTG---ATAATGGAGTTAGGCCTGATGTTGAGATATATAACTGAAGAAGAGTGAG-AGGATCACCTTTCAATTTACAAAGATCATCATAGGGCCAGTATAAAAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762123 119 + 115148730 TTAGTCATTATGA--TAGAAAG-TG---ATTATGGAGTTAGGCCTGATGTTCAGATGTATAACTGAAGAAGAGTGAG-AGGATCACCTTTAAATTTACAAAGATCATCCTAGGGCCAATATAAAAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187988078 120 + 189454096 TTAGTCATTCTGA--TGGAAAGTTG---AATACGGAGTTAGGCCTGATGCTGAGATGTATAACTGAagaagagtgac-aggatcacctttcaatttacaaaggtcatcctagggccagtataaaaa i macFas5.chr5 C 0 I 1 s cerAty1.NW_012001672v1 3408941 120 + 4669795 TTAGTCATTCTGA--TGGAAAGTTG---AATACAGAGTTAGGCCTGATGCTGAGATGTATAACTGAagaagagtgac-aggatcacctttcaatttacaaaggtcatcctagggccagtataaaaa i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134365899 120 + 135778131 TTAGTCATTCTGA--TGGAAAATTG---AATACAGAGTTAGGCCTTATGCTGAGATGTATAACTGAAGAAGAGTGAC-AGGATCACCTTTCAATTTACAAAGGTCATCCTAGAGCCAGTATAAAAA i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012102221v1 2832786 120 - 2847728 TTAGTCATTCTGA--TGGAAAGTTG---AATACAGAGTTAGGCCTGATGCTGAGATGTATAACTGAagaagagtgac-aggatcacctttcaatttacaaaggtcatcctagggccagtataaaaa i manLeu1.NW_012102221v1 C 0 I 1 s colAng1.NW_012116221v1 929964 120 + 2368649 TTAGTCATTCTGA--TGGAAAGCTG---AATATGGAGTTAGGCCTGATGCTGAGATGTATTACTGAagaagagtgac-aggatcacctttcaatttaaaaaggtcatcctagggccagtataaaaa i colAng1.NW_012116221v1 C 0 I 1 s calJac3.chr3 189661865 120 - 190850796 TTGGTCGTTGTGA--TGGAAAACTC---GATGTGGAGTTCAGCCTGATGTTGAGACTTACAACTGAGGAAGAGTGAC-AGAATCACCTTTCAATTGTCAGAAATCATCCTAGGGCCAGTATAAAGA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13154881 120 - 14256875 TTAGTCATTGTGA--TGGAAAACTT---GATAGGGAGTTCGGCCTGATGTTGAGACTTATAACTGAAGAAGAGTGTT-AGGATCACCTTTCAATTTTCAAAAATCATCCTAGGGCCAGTATAAAGA i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 1046568 120 - 2196201 TTAGTCATTGTGA--TGGAAAACTT---GATATGGCATTCGGCCTGTTGTTGAGACTTATAACTGAACAAGAGTGAT-AGGATCACCTTTCAATTTTCAAAAATCATCCTAGGGCCAGTATAAAGA i cebCap1.NW_016107886v1 I 1809 I 1 s aotNan1.NW_018492112v1 3432766 120 - 5030052 TTTGTCATTGTGA--TGGAAAACTT---GATGTGGAGTTCGGCCTGATGTTGAGACTTATAACTGAGGAAGAGTGAT-AGAATCACCTTTCAAGTTTCAAAAATCATCCTAGGGCCAGTATAAAGA i aotNan1.NW_018492112v1 C 0 I 1 s mm10.chr8 86647608 121 - 129401213 TAGGTCTGTCTAACTTTGAACAGTGTGAACTGTGCACTTCACC----TGCTGAGATGTGTCACTGAAGAAGAGTGGCTTGAATCACATTACTGTATGGAAGGAGCATCC-ATGTAAAGAATAAAGG i mm10.chr8 C 0 I 1 e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e macNem1.NW_012013133v1 24379349 176 - 25927173 I e rheMac8.chr5 189045136 176 + 190429646 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=35176.000000 s hg38.chr4_KI270789v1_alt 173378 3 + 205944 TAT s panTro5.chr4 192958606 3 + 194502333 TAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841123 3 + 195804263 TAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874342 3 + 4876863 TAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762242 3 + 115148730 TAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045312 3 + 190429646 tat i rheMac8.chr5 I 176 C 0 s macFas5.chr5 187988199 3 + 189454096 tat i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24379525 3 - 25927173 tat i macNem1.NW_012013133v1 I 176 C 0 s cerAty1.NW_012001672v1 3409062 3 + 4669795 tat i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134366020 3 + 135778131 TAT i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012102221v1 2832907 3 - 2847728 tat i manLeu1.NW_012102221v1 I 1 C 0 s colAng1.NW_012116221v1 930085 3 + 2368649 tat i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189661986 3 - 190850796 TAT i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13155002 3 - 14256875 TAT i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1046689 3 - 2196201 TAT i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3432887 3 - 5030052 TAT i aotNan1.NW_018492112v1 I 1 C 0 s mm10.chr8 86647730 3 - 129401213 TAC i mm10.chr8 I 1 C 0 e micMur3.chr14 17547198 597 - 93316391 I e dasNov3.JH570353 1493220 334 - 2520184 I e canFam3.chr16 16995129 26 - 59632846 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=623599.000000 s hg38.chr4_KI270789v1_alt 173381 59 + 205944 TTTAGAGACAAGTAATAATGGAATTAGGGAAACCAGTTCAGGTAAAAAATGATGTTGTT s panTro5.chr4 192958609 59 + 194502333 TTTAGAGACAAGTAATAATGGAATTAGGGAAACCAGTTCAGGTAAAAAATGATGTTGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841126 59 + 195804263 TTTAGAGACAAGTAATAATGGAATTAGGGAAACCAGTTCAGGTAAAAAATGATGTTGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874345 59 + 4876863 TTTAGAGACAAGTAATAATGGAATTAGGGAAACCAGTTCAGGTAAAAAATGATGTTGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762245 59 + 115148730 TTTAGAGACAAGTAATAATGAAATTAGGGAAACCAGTTCAGGTAAAAAATGATGTTGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045315 59 + 190429646 tttagagacaagtaataatgaaattagggaaaccagttaagGTAAAAAATGATATTGTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988202 59 + 189454096 tttagagacaagtaataatgaaattagggaaaccagttcaggTAAAAAATGATATTGTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379528 59 - 25927173 tttagagacaagtaataatgaaattagggaaaccagttcaggtaaaaaatgatattgtc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409065 59 + 4669795 tttagaaacaagtaataatgaaattagggaaaccagttcaggtaaaaaatgatattgtc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366023 59 + 135778131 TTTAGAGACAAGTAATAATGAAATTAGGGAAACCAGTTCAGGTAAAAAATGATATTGTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832910 59 - 2847728 tttagagacaagtaataatgaaattagggaaaccagttcaggtaaaaaatgatattgtc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 930088 59 + 2368649 tttagagacaagtaataatgaaattagggaaactagttcaggTAAAAAATGGTATTATC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189661989 59 - 190850796 CTTAGAAAGAACTAATGAGGAAATTAGGGAAGCCAGTTCAGGTAAAAAGTAATATTGTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155005 59 - 14256875 CTTAGAAAGAACTAATAAGGAAATTAGGGAAACCAGTTCAGGTAAAAAGTAATATTGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1046692 59 - 2196201 CTTAGAAAGAACTAATAAGGAAATTAAGGAAACCAGTTCAGGTAAAAAGTAATATTGTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432890 59 - 5030052 CTTACAAAGAACTATTAAGAAAATTAGGGAAGCCAGTTCAGGTAAAAAGTAATATTGTC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86647733 59 - 129401213 TTTGGGGAAAAGTAAAATTGGGGTAAGAGAGACTTAATTAGAAGAAAATTGGTCCCTCC i mm10.chr8 C 0 I 2 s dasNov3.JH570353 1493554 58 - 2520184 TTTAGAAAGAAG-AAAAATGGAGTCAGGAATACCAGTTTAGGTTAGAAATGATAGTATC i dasNov3.JH570353 I 334 C 0 e micMur3.chr14 17547198 597 - 93316391 I e canFam3.chr16 16995129 26 - 59632846 I e otoGar3.GL873580 11281724 393 - 11315646 I a score=1178652.000000 s hg38.chr4_KI270789v1_alt 173440 117 + 205944 CTAG---ATTTTGGAGGTGACTGAAGAG----AAAAAGT----ACATATAATTCACTTATAGCTCTGCTTATCCTATTACGGGTATTTCTTTCTAAT------GGAGATTACAGATGTTATTTTTA-AAACACTT s panTro5.chr4 192958668 117 + 194502333 CTAG---ATTTTGGAGGTGACTGAAGAG----AAAAAGT----ACATATAATTCACTTATAGCTCTGCTTATCCTATTACGGGTATTTCTTTCTAAT------GGAGATTACAGATGTTATTTTTA-AAACACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841185 117 + 195804263 CTAG---ATTTTGGAGGTGACTGAAGAG----AAAAAGT----ACATATAATTCACTTATAGCTCTGCTTATCCTATTACGGGTATTTCTTTCTAAT------GGAGATTACAGATGTTATTTTTA-AAACACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874404 117 + 4876863 CTAG---ATTTTGGAGGTGACTGAAGAG----AAAAAGT----ACATATAATTCACTTATAGCTCTGCTTATCGTATTACGGGTATTTCTTTCTAAT------GGAGATTACAGATGTTATTTTTA-AAACACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762304 117 + 115148730 CTAG---ATTTTGGAGGTGACTGAAGAG----AAAAAAT----GCATAAAATTCATTTATAGCTCAGCTTATCCTATTATGGGTATTTCTTTCTAAT------GGAGATTACAGATGTTATTTTTA-AAATACCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045374 117 + 190429646 CTAG---ATGTTGGAGGTGACTGAAGAG----AAAAAAT----ACATAAAATTCACTGAAAGCTCAGCTTATCCTGTTATGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988261 117 + 189454096 CTAG---ATGTTGGAGGTGACTGAAGAG----AAAAAAT----ACATAAAATTCACTGAAAGCTCAGCTTATCCTGTTATGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379587 117 - 25927173 ctag---atgttggaggtgactgaagag----AAAAAAT----ACATAAAATTCACTGAAAGCTCAGCTTATCCTGTTATGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409124 117 + 4669795 ctag---atgttggaggtgactgaagag----AAAAAAT----ACATAAAATTCACTGAAAGCTCAGCTTATCCTATTATGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366082 117 + 135778131 CTAG---ATGTTGGAGGTGACTGAAGAG----AAAAAAT----ACATAAAATTCACTGAAAGCCCAGCTTATCCTGTTATGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2832969 117 - 2847728 ctag---atgttggaggtgactgaagag----AAAAAAT----ACATAAAATTCACTGAAAGCTCAGCTTATCCTGTTACGGGTATCTGTTTCTAAT------GGAGATTACAGGTGTGATTTTTA-AAATATCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 930147 117 + 2368649 CTAG---ATGTTGGAGGTGACTGAAGAG----AAAAAAT----ACATAAAATTCATTGAAAGCTCAGCTTGTCCTATTATGGGTATCTGTTTCTAAT------GGAGATGACAGGTGTAATTTTAA-AAATATCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662048 117 - 190850796 CTAG---ATTTTGGAGCTGACTGAAGAG---AAAAAAAC----ACACAAAATTCATTTATAGCTCAGCTTATTCTGTTACAGGTGTTCCTTTCTAA-------TGGCATTACAGATGTTGTTTTTA-AAATACCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155064 120 - 14256875 CTAG---ATTTTGGAGCTGACTGAAGAGAAAAAAAAAAC----ACAGAAAATTCATTTATAGCTCAGCTTATTCTATTACAGGTATTCCTTTCTAAT------TGGGATTACAGATGGTA-TTTTA-AAATACCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1046751 119 - 2196201 CTAG---ATTTTGGAGATGACTGAAGAG--AAAAAAAAC----ACGTAACATTCATTTATAGCTCAGCTTATTCTGTTACGGGTATTCCTTTCTAAT------GGGGATTACAGAGGTTGTTCTTA-AAATACCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3432949 117 - 5030052 CTAG---ATTTTGGAGCCGACTGAAGAG---AAAAAAAC----ACATAAAATTCATTTATAGCTCAGCTTACTCTATTACAGGTATTCCTTTCTAA-------TGGCATTACGGATGTTGTTTTTA-AAATACCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11282117 118 - 11315646 CTAG---ACTCCGGTGGTGTCTGAACAG---GAAAAAAT----ACATGAAATTCATTCATATGTCAATTTATTCTGCCATGGGGATTGTTTTGTAGT------AGAGATTACAGATGTTATTTTAA-AAATATCC i otoGar3.GL873580 I 393 C 0 s mm10.chr8 86647794 120 - 129401213 CTAAT--GTTCTGGCAGTGAA-GGAGAA----AAAAAATCACAACATGCAACATACTTTTCTCTCAACTTACCCTACAATGGGTATT--TTTTTAAT------AGAGCTTGCATATGCAATGTTTACAAATATCC i mm10.chr8 I 2 C 0 s dasNov3.JH570353 1493612 120 - 2520184 ----CTCATTGTGGAGGTTGGTGAAGAG-----AAGAGC----ACGTAACATACATTTACATCTCAAGATGTTCCATTATGAACGTGTGTTTTCTATTACGAACGAGTCTACATATGTCA-TTTTA-AAACGTTT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547198 597 - 93316391 I e canFam3.chr16 16995129 26 - 59632846 I a score=629718.000000 s hg38.chr4_KI270789v1_alt 173557 56 + 205944 TGTGATTCTGAGGAGGCATTTACTTATGGGTCTAGTTGTATCATTAGTAACAATAT s panTro5.chr4 192958785 56 + 194502333 TGTGATTCTGAGGAGGCATTTACTTATGGGTCTAGTTGTATCATTAGTAACAATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841302 56 + 195804263 TGTGATTCTGAGGAGGCATTTACTTATGGGTCTAGTTGTATCATTAGTAACAATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874521 56 + 4876863 TGTGATTCTGAGGAGGCATTTACTTATGGGTCTAGTTGTATCATTAGTAACAATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762421 56 + 115148730 TGTGATTCTGAGGAGGCATATACTTATGGATCTAGTTGTATCATTAGTAACAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045491 56 + 190429646 TGTGATTCTGAGGAGGCATTTCCTTGTGGATCTAGTTGTATCATTAGTAACAATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988378 56 + 189454096 TGTGATTCTGAGGAGGCATTTCCTTGTGGATCTAGTTGTATCATTAGTAACAATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379704 56 - 25927173 TGTGATTCTGAGGAGGCATTTCCTTGTGGATCTAGTTGTATCATTAGTAACAATAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409241 56 + 4669795 TGTGATTCTGAGGAGGCATTTCCTTATGGATCTAGTTGTATCATTAGTAACAATAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366199 56 + 135778131 TGTGATTCTGAGGAGGCATCTCCTTATGGATCTAGTTGTATCATTAGTAACAATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2833086 56 - 2847728 TGTGATTCTGAGGAGGCATTTCCTTATGGATCTAGTTGTATCATTAGTAACAATAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 930264 56 + 2368649 TGTGATTCTGAGGAGGCATTTCCTTATGGATCTAGTTGTACCATTAGTAACAATGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662165 53 - 190850796 CGTGATGCTGAGGAGCCATTCACTGATGGATCTAGTTGTATAATTAGTAACAG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155184 53 - 14256875 TGTGATGCTGCGGAGGCATTTACTGATGGATCCAGTTGTATAATTAGTAACAA--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1046870 53 - 2196201 TGTGATGCTGGGGAGGCATTTACTGATGGATCTAGTTGTATAATTAGTAACAA--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433066 53 - 5030052 CGTGATGCTGAGGAGGCATTTACTGATGGATCTAGTTGTGTAATTAGTAACAA--- i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17547795 56 - 93316391 TGTGATTCTAAGAAGCCCTTTACCTATGGATCTAGTTGTATAATTTGTAACAATAT i micMur3.chr14 I 597 I 446 s otoGar3.GL873580 11282235 27 - 11315646 TATGATTCTAAGAAGACCTTGATCTCT----------------------------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647914 56 - 129401213 TATGAATCTAGGGAGCCATTTAGTAATACATATACATGTGTGGTTTGTACCAATAT i mm10.chr8 C 0 C 0 s dasNov3.JH570353 1493732 56 - 2520184 AGTTTTTCCAAGGAACCATTTACTTACAGAATTATTTGTCTGATTTGTAACAATAT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16995129 26 - 59632846 I a score=1851798.000000 s hg38.chr4_KI270789v1_alt 173613 163 + 205944 ATATTGTGTTTA--TCTT--AAGCACAC-TTCTCTGCACATTATCTCAACTTCCTGGGTTGCTTGATCGGATAAAGCA-TTTATATTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTGACATAATATTCC---ATAGTTGTGCAAATGTTTAGTTTTTTTT s panTro5.chr4 192958841 161 + 194502333 ATATTGTATTTA--TCTC--AAGCACAC-TTCTCTGCACATTATCTCAACTTCCTGGGTTGCTTGATCGGATAAAGCA-TTTATATTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTGACATAATATTCC---ATAGTTGTGCAAATGTTTAG--TTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841358 160 + 195804263 ATATTGTATTTA--TCTC--AAGCACAC-TTCTCTGCACATTATCTCAACTTCCTGGGTTGCTTGATCGGATAAAGCA-TTTATATTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTGACATAATATTCC---ATAGTTGTGCAAATGTTTAG---TTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874577 161 + 4876863 ATATTGTATTTA--TCTC--AAGCACAC-TTCTCTGCACATTATCTCAACTTCCTGGGTTGCTTGATTGGATAAAGCA-TTTATATTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTGGCATAATATTCC---ATAGTTGTGCAAATGTTTAG--TTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762477 162 + 115148730 TTATTGTATTTA--TGTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGCTAAAACA-TTTATATTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTAG-TTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045547 161 + 190429646 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTAG--TTTATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988434 162 + 189454096 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAACTGTTTAG-TTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379760 160 - 25927173 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTA---CTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409297 160 + 4669795 ATATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGACTAAATACTCTCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTA---GTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366255 161 + 135778131 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCCTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTAG--TTTTTT i chlSab2.chr7 C 0 I 3 s manLeu1.NW_012102221v1 2833142 162 - 2847728 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTCTGATCTGATAAAACG-TTTATCTTTGTCTTCTACAATATGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTAG-TTTTTTT i manLeu1.NW_012102221v1 C 0 I 3 s colAng1.NW_012116221v1 930320 162 + 2368649 GTATTGTGTTTA--TCTC--AAGCACAC-TTCTCTGCATATTATCTCAACTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATGTGACTAAATACTATCCCCAATCAAAGTCACATAATATTCC---ATAGTTGTGCAAATGTTTAG-ATTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662218 159 - 190850796 -TATTGTATTTA--TCTC--AAGCACAG-TGTTCTGCATATTATCTCAAGTTGCTGGGTTGTCTGATCTGATACAA-A-CTTGTCTTTGTCTTCTAAAATATGACTAAATTCTATCCCCAATCAAAGTCAGATAATATTCC---ATGCTTGTGCAAATGTTTAG--ATTTTT i calJac3.chr3 C 0 I 22 s saiBol1.JH378165 13155237 158 - 14256875 -TATTGTATTTA--TCTC--AAGCACAG-TTCTCTGCATATTATCTCAAGTTCCTGGGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGAC--ACTAATATCCCCAATCAAAGTCAAATAATATTCC---ATACTTGTGCAAATGTTTAG--ATTTTT i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 1046923 158 - 2196201 -TATTGTATTTA--TCTC--AAGCACAG-TTCTCTGCATATTATCTCAAGTTCCTGAGTTGTTTGATCTGATAAAACA-TTTATCTTTGTCTTCTAAAATATGAC--AATAGTATCCCCAGTCAAAGTCAAATAATATTCC---ATACTTGTGCAAATGTTTAG--ATTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433119 159 - 5030052 -TATTGTATTTA--TCTC--AAGCACAG-TTCTCTGCATATTATCTCAAGTTCCTGGGTTGTTTGATCTGATAAAACA--TTATCTTTGTCTTCTAAAATATGACTAAATACTATCCCCAATCAAAGTCAAATAATATTCC---AAACTTGTGCAAATGTTTAG--ATTTTT i aotNan1.NW_018492112v1 C 0 I 2 s otoGar3.GL873580 11282262 141 - 11315646 ---------ATA--TTTC--A--------TTTTCTGCATGTCGTCTCAAGTTCCTAAGTTGTTTGATCTGATAAAACA-TTTATTTTCATTTCCCCTAATGTGGCTAAATACAATCTCCAGTCAAAGCCAGGAAATATCCC---ATTCTTGTGCAAATGCTTAC--CT---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86647970 149 - 129401213 -------ATTTAATTCTT--AAGCACATATTTTGTACATATCATCTCCAGCTTCTAGGTGAGTTAAAAT-ACAAATCACTTTTTTTTTGTCTTTTCAAATTTTACTCCGTATTGTCCCCAGTCAAACAGACATAG-----C---ATACTTGTGAAAA-GTTTAT--ATCA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 16995155 147 - 59632846 ACATTATATTTA--TCTCCTAAGCACAGATTCTCTACATATCCTATCAAGTTGCCTGATTGTTTTATCTATTAAAACA-TTTATCTTTATCTTCCCAAATGTGACTAAATACTATCC----TCAAAGTCCGATACTATTCCTATATACTT---------TATA--------- i canFam3.chr16 I 26 C 0 s dasNov3.JH570353 1493788 153 - 2520184 ----CGTATGTA--TCTCCTAAGCACA--TTGTCTGCCTAGCATCTCAAGTTCCTAGAATATATGACCTAATAAACAA-TTTATCTTTATTTTCCAAAGTGTGACTAAATACTATCACTAACCAAAACCATGTGATAGCCC---ATGCTTATGTAAACATTTAC--A----- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547851 446 - 93316391 I a score=2111872.000000 s hg38.chr4_KI270789v1_alt 173776 221 + 205944 TTTTTGTGCCGAAAGATA-----AG-------TCACAGGCTGGGGTATTTGATTTTTC---TTT---TAAAAATGATAAAGCAGAAGGAGAGAGAA--AGAGA--CCAAGAAAATA-AAATTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTTTTTAAGAGAA--ATATAGGTATAAAAGGCATTCATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAAT--------------TAAACTCTTTTA s panTro5.chr4 192959002 221 + 194502333 TTTTTGTGCCGAAAGATA-----AG-------TCACAGGATGGGATATTTGATTTTTC---TTT---TAAAAACGATAAAGCAGAAGGAGAGAGAA--AGAGA--CCAAGAAAATA-AAATTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTTTTTAAGAGAA--ATGTAGGTATAAAGGGCATTCATGAGAAATAGAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAAT--------------TAAACTCTTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841518 221 + 195804263 TTTTTGTGCCGAAAGATA-----AG-------TCACAGGATGGGATATTTGATTTTTC---TTT---TAAAAACGATAAAGCAGAAGGAGAGAGAA--AGAGA--CCAAGAAAATA-AAATTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTTTTTAAGAGAA--ATGTAGGTATAAAGGGCATTCATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAAT--------------TAAACTCTTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874738 221 + 4876863 TTTTTGTGCTGAAAGATA-----AG-------TCACAGGCTGGGATATTTGATTTTTC---TTT---TAAAAACGATAAAGCAGAAGGAGAGAGAA--AGAGA--CCAAGAAAATA-AAATTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTTTTTAGGAGAA--ATATAGGTATAAGGGGCATTCATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAAT--------------TAAACTCTTTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762639 224 + 115148730 TTTTTGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT---TAAAAATGATAAAGC---AGGAGAGAGAA--AGAGA--CCAAGAAAATA-AAATTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATACAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAATTGAATAAATAAAA--------TCTAAACTATTTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045708 223 + 190429646 TTTTTGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT---AAAAAATGATAAAGCAGAAGGAGAGGGAA--AGAAA--CCAAGAAAATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988596 223 + 189454096 TTTTTGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT---AAAAAATGATAAAGCAGAAGGAGAGGGAA--AGAAA--CCAAGAAAATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24379920 223 - 25927173 TTTTTGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT---AAAAAATGATAAAGCAGAAGGAGAGGGAA--AGAAA--CCAAGAAAATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409457 224 + 4669795 TTTTTGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGACTTTTC---TTT--AAAAAAATGATAAAGCAGAAAGAGAGGGAA--AGAAA--CCAAGAAAATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366419 220 + 135778131 TGTGTGTGCTGGAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT--AAAAAAATGATAAAGCAGAAGGAGAGGGGA--AGAAA--CCAAGAAAATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGA----TTAAGAGAG--ACATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i chlSab2.chr7 I 3 C 0 s manLeu1.NW_012102221v1 2833307 224 - 2847728 TGTGTGTACTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT--AAAAAAATGATAAAGCAGAAGGAGAGGGGA--AGAAA--CCAAGAACATA-AAATTGTATACAGTGAAACATAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATAGGTATAAGGGGCATACATGAGAAATACAAGAA-----------------------------------------GAGAGAAAGAGAAGTGAATAAATAAAA--------TCTAAACTAT---- i manLeu1.NW_012102221v1 I 3 C 0 s colAng1.NW_012116221v1 930482 220 + 2368649 ----TGTGCTGAAAGATA-----AG-------ACACAGGCTGGGATATTTGATTTTTC---TTT--AAAAAAATGATAAAGCAGAAGGAGAGGGAA--AGAGA--CCAAGAAAATA-ACAGTGTATACAGTGAAACACAGATGTTATCTG-AAAAATGGATTGTTTAAGAGAA--ATATACGTATAAGGAGCATACATGAGAAACACAAGAA-----------------------------------------GAGAGAAAGAAAAGTGAATAAATAAAA--------TCTACACTAT---- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13155397 224 - 14256875 -GTGCATTCTAAAAGATA-----AG-------ACACTGGCAGGGATATTTGATTTTTC---TTT---TAAAAATGATAAAGCAGAAGGAGAGAGAA--ACAGA--CCAAGAAAATA-AAATCATATACAGTGAAACACAGGTGTTATCTGAAAAAATAGATCGTTTAAGAGAA--ATATAGGTTTAAGGGGCATGCATAAGAAATGCAAGA---------------------------------------------AGAAAGGGAAGTGAATAAATAAAAA-------TCTAAACTATTTTA i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 1047081 225 - 2196201 TGTATGTTCTGAAAGATA-----AG-------ACACAGGTGGGGATATTTGATTTTTC---TTT---TAAAAATGATAAAGCAGAAGGAGAGAGAA--ACAGA--CTAAGAAAATA-AAATCATACATAGTGAAAGACAGGTGTTATCTGAAAAAATAGATTGTTTAAGAGAA--ATATATGTTTAAGGGGCATGCATAAGAAATGCAAGA---------------------------------------------GGAAAGGGAATTGAATAAATAAAAC-------TCTAAACTATTTTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433280 219 - 5030052 --TGTGTTCTGAAAGATA-----AG-------ACACAGGTGGGGATATTTGATTTTTC---TTT---TAAAAATGATAAAGCAGAAGGAGAGAGAA--ACAGA--CCAAGAAAATA-AAATCATATACAGTGAAACACAGGTGTTATCTGAAAAAATAAA----TTAAGAGAA--ATGTAGGTTTAAGGGGCATGCATAAGAAATTCAAGA---------------------------------------------AGAAAAGGAAGTGAATAAATAAAAA-------TCTAAACTATTTTA i aotNan1.NW_018492112v1 I 2 C 0 s otoGar3.GL873580 11282403 224 - 11315646 TTTTTGTGCTAATAGAGA-----AG-------ACAGAGGTTAAGATAGTTGATTCTTC---TGATAGTAAAAATGATAAAGCAGAGGGAGAGGAAAGCACAGA--CCACGCAAATG-CCATTGTGTATAGTGAAA-AGAGAAATTATCAG-AAAAATGGATTGTTCAAGGGAA--ACACAGGCATAAAGGGCATATAGGGGAAATG-------------------------------------------------GAAAGAGAGAGGTGGATACAAAAAAA-------TGTAAACTCTTTAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648119 233 - 129401213 CTTTTGTGTTGAAACATA-----AGGAAAGAAAAAAGTGGTAGAATATTTTATTTTGTTGATGT---TAGAATTTATTAAGCAAAAAGAACAGGAA--ACAGAGTCTAAGAA-----------TATGTAGTAAAG-ACAGAAG---TCTG-GGTAGCAGATTACCTAGTAGAATTGTGTACACGAAATGGGCATATGTGACAAATACAAGAG-----------------------------------------AGGGAAAAGAG--GTGGTTAAAAAAAAAACCCAACCCTACACTAGTGAA i mm10.chr8 C 0 I 6 s canFam3.chr16 16995302 229 - 59632846 TTTTTGTGTTGAAAGATACAGGCAA-------ACAAAGGCTGAGATATTTGATCTGAT---TTG---AAAAAATGATAACATGAAAGGAGAGGTAA--ACAGAGGCTAAGAAAATGTAAAATGTGTATTGTGAAA-ACAGACA-TATCTG-AAAAGTGGATTATCTGAGGGA---ATATAGGTCTAAGAGGCATGCATGAAAAATGCAAAAT-----------------------------------------GAGAGAGACAAAATTATATACAAA-----------TCTAAACTATTTTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1493941 269 - 2520184 TTTTTGTGCGAAAAAATA-----AG-AAACCAACAAAGGCTAAGATAGTTGATTTTGTTGATGT---TAAAAATAGTAAAGCAAAAGGAGGTGGAA--ACAAA-----GGACAAGA-----TGTGTAGAGTGAAATGGAGATCTTACCTA-ACGAATGGA-TGTCTGAGGCAA--ATATAGGTATAAGGGACATGCAGGAGAAATACAAGAGAGAAAAAGCAAATATAGGTATAAGGGACATTCAGGAGAAATGCAAGAGAGAGAGGCAATTAAATAAAA--------TCTAAAGTATTTTA i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189662377 22 - 190850796 I e micMur3.chr14 17547851 446 - 93316391 I a score=234455.000000 s hg38.chr4_KI270789v1_alt 173997 28 + 205944 ATTATTGC-----------AACAGC----------TCAAATAGTAGATT s panTro5.chr4 192959223 28 + 194502333 ATTATTGC-----------AACAGC----------TCAAATAGTAGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841739 28 + 195804263 ATTATTGC-----------AACAGC----------TCAAATAGTAGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874959 28 + 4876863 ATTATTGC-----------AACAGC----------TCAAATAGTAGATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762863 28 + 115148730 ATTATCGC-----------AATAGC----------TCAAATATTAGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045931 27 + 190429646 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988819 27 + 189454096 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380143 27 - 25927173 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409681 27 + 4669795 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366639 27 + 135778131 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2833531 27 - 2847728 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i manLeu1.NW_012102221v1 C 0 T 6296 s colAng1.NW_012116221v1 930702 27 + 2368649 -TTATTGC-----------AATAGC----------TCAAATAGTAGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662399 28 - 190850796 ACTATTGC-----------AATAGC----------TCAAATAGTATATT i calJac3.chr3 I 22 C 0 s saiBol1.JH378165 13155621 28 - 14256875 ATGATTGC-----------AATAGC----------TAAAATAGTATATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047306 28 - 2196201 ACGATTGC-----------AATAGC----------TAAAATAGTATATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433499 28 - 5030052 ATGATTGT-----------AGTAGC----------TCAAATAGTGTATT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11282627 23 - 11315646 ATAATAGC-----------AATAGT----------TAAAACAGC----- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648358 26 - 129401213 CTTGTTGC-----------TAC-GA----------GCAGGGAGTAATT- i mm10.chr8 I 6 C 0 s canFam3.chr16 16995531 49 - 59632846 ACTAGTGCCTGCTCATAAAAATGCCATCATTTGAATCATATTACATATT i canFam3.chr16 C 0 I 11 s dasNov3.JH570353 1494210 31 - 2520184 ACTATTGCCTACTCAT---AGCAAC----------ACCACCATT----- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547851 446 - 93316391 I a score=710282.000000 s hg38.chr4_KI270789v1_alt 174025 105 + 205944 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTG---AGGTCTTTATACATATAC-----TATTTTAAT-----------------------------------------------TCTCTCTCTATATATATAATGAAATGT---TATTCCAAAATGCAATATAATCCC s panTro5.chr4 192959251 105 + 194502333 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTG---AGGTCTTTATACATATAC-----TATTTTAAT-----------------------------------------------TCTCTCTCTCTATATATAATGAAATGC---TATTCCAAAATGCAATATAATCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841767 105 + 195804263 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTG---AGGTCTTTATACATATAC-----TATTTTAAT-----------------------------------------------TCTCTCTCTCTATATATAATGAAATGC---TATTCCAAAATGCAATATAATCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3874987 105 + 4876863 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTG---AGGTCTTTATACATATAC-----TGTTTTAAT-----------------------------------------------TCTCTCTCTATGTATATAATGAAATGC---TATTCCGAAATGCAATATAACCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762891 105 + 115148730 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTTCATACATATAC-----TATTTTAAT-----------------------------------------------TCTCTCTCTCTATATATAATGCAATGC---TATTCCAAAATGCAATATAACCCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189045958 101 + 190429646 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATACATATAC-----TATTCTAAT---------------------------------------------------TCTCTCTATATATAATGAAATGC---TATTCCAAAACgcagtataaccca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988846 101 + 189454096 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATACATATAC-----TATTCTAAT---------------------------------------------------TCTCTCTATATATAATGAAATGC---TATTCCAAAACGCAGTATAACCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380170 101 - 25927173 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATACATATAC-----TATTCTAAT---------------------------------------------------TCTCTATATATATAATGAAATGC---TATTCCAAAACgcagtataaccca i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409708 101 + 4669795 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATACATATAC-----TATTCTAAT---------------------------------------------------TCTCTCTATATATAATGAAATGC---TATTCCAAAACgcagtataaccca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366666 98 + 135778131 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATAC------------ATTCTAAT-----------------------------------------------TCTCTCTCTCTATATATAATGAAATGC---TATTCCAAAACGCAGTATAACCCA i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 930729 105 + 2368649 TTAACTATAATAT--------------------------------------------------------TTGATAGACATGTA---AGGTCTCTATACATATTG-----TATTCTAAT-----------------------------------------------TCTCTCTCTCTATATATAATGAAATGC---TATTCCAAAATGCAGTATAACCCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662427 97 - 190850796 TTAACTACAATAT--------------------------------------------------------TTGATAGACATAAA---AGGTCTCTATACATATAC-----TATTTTAAT-------------------------------------------------------TCTCTCTCTAATGAAATGC---TATTTCAAAATACATTATAACCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155649 129 - 14256875 TTAACTATAATAT--------------------------------------------------------TTGATAGACATAAA---AGGTCTGTATACATATAC-----TATTTTAATtctctctgtc-----------------------tctctctctctctctgtctctctctctctctAATGAAATGC---TATTCCAAAATACAATATAACCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047334 133 - 2196201 TTAATTATAATAT--------------------------------------------------------TTGACAGACATAAA---AGGTCTGTATACATATAC-----TATTTTAATtctctctctc-------------------tctttctccctctctctctgtctctctctgtctctAATGAAATGC---TATTCCAAAATACAATATAACCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433527 97 - 5030052 TTAACTATAATAT--------------------------------------------------------TTGATAGACATAAA---AGGTCTCTATACATATAC-----TATTTTAAT-------------------------------------------------------TCTCTCTCTAATGAAATGC---TATTCCAAAATACAATATAACCCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11282650 41 - 11315646 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATGTATGCAATAAAATGT---TATTTCAGA---TGATATAACCCA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648384 92 - 129401213 AAAACTATATATG--------------------------------------------------------TGGATGCACACACA--CATATATGCATACATATAT-----GA----AAT---------------------------------------------------------GAGAGGTGATGAAATCT---TAACTCAGAAAGCAATATGACGCA i mm10.chr8 C 0 C 0 s canFam3.chr16 16995591 216 - 59632846 ATAACTAAAATGTGATATATCAGTCTCCTTCAGCGATATGTCTCCACATCAAGAAGAAGGCtatgtatgtagatacacacatatatacatttatatacatacacatatatatgtaaatttattatatcattgctctaacattttatatatgtgtgtgtgtatatatgtgtgtgtatatatatatatatatgtatatatatCAAAAACCAAAGTAAC--- i canFam3.chr16 I 11 C 0 s dasNov3.JH570353 1494241 84 - 2520184 TGAATCATAGTAA-----------------------------------------------------------ATATATATCCa---taatttttatatatataa-----ta----aaa-------------------------------------------------------------aataatGAAATGT---TATGTCAGAAAACAGTATAGGCCA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17547851 446 - 93316391 I e manLeu1.NW_012102221v1 2833558 6296 - 2847728 T a score=533978.000000 s hg38.chr4_KI270789v1_alt 174130 43 + 205944 GTGGAAAATTTATTCAGTCGGAAAAAGGAGA-AAATAAGGTTCT s panTro5.chr4 192959356 43 + 194502333 GTGGAAAATTTATTCAGTCGGAAAAAGGAGA-AAATAAGGTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841872 43 + 195804263 GTGGAAAATTTATTCAGTCGGAAAAAGGAGA-AAATAAGGTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875092 43 + 4876863 GTGGAAAATTTATTCAGTCGGAAAAAGGAGA-AAATAAGGTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112762996 43 + 115148730 GTGGAAAATTTATTCAGTCAGAAGAAGGAGA-AAATAAGGTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046059 43 + 190429646 gtggaaaatttattcagtcagaaaaaagaga-aaataaggttct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988947 43 + 189454096 GTGGAAAATTTATTCAGTCAGAAAAAAGAGA-AAATAAGGTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380271 43 - 25927173 gtggaaaatttattcagtcagaaaaaagaga-aaataaggttct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409809 43 + 4669795 gtggaaaatttattcagtcagaaaaaagaga-aaataaggttct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366764 43 + 135778131 GTGGAAAATTTATTCAGTCAGAAAAAAGAGA-AAATAAGGTTCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 930834 39 + 2368649 GTGGAAAATTTAT----TCAGAAAAAAGAGA-AAATAAGGTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662524 41 - 190850796 GTGGAAAATGTTTTCAGTCAGA--AAGGAGA-AAATAAGATTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155778 41 - 14256875 GTGGAAAATTTATTCAGTCAGA--AAGGAGA-AAATAAGGTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047467 41 - 2196201 GTGGAAAATTTATTCAGTCAGG--AAGGAGA-AAATAAGGTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433624 41 - 5030052 GTGGAAAATGTTTTCAGTCAGA--AAGGAGA-AAATAAGTTTCT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548297 41 - 93316391 GTGGGAAATTTATTCAGTTAGG--AAAGAGA-AAATGAggttct i micMur3.chr14 I 446 C 0 s otoGar3.GL873580 11282691 40 - 11315646 GTGGAAAA-TTATTCAGTTAGG--AAAGGGA-AAATGAAGTTCT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648476 41 - 129401213 GTGGTAAATTTATTCAGTGGGA--AAAGAGA-AAATGAGGTCCT i mm10.chr8 C 0 C 0 s canFam3.chr16 16995807 39 - 59632846 --AGACATTTTATTCAATTAGA--AAaggga-aaatgaggtttg i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1494325 42 - 2520184 GGGGAAAATTCATTCAGTAAGA--AAAGAGATAAACGAGGTTCT i dasNov3.JH570353 C 0 C 0 e manLeu1.NW_012102221v1 2833558 6296 - 2847728 T a score=2467190.000000 s hg38.chr4_KI270789v1_alt 174173 188 + 205944 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacgccctactatgtatatcatatgtaaatgtct----aaaatgagataatagtattgaaaatggctttg-aa--------------------------------------aaA-A---A-ATACAAGGGAT-------TGAGTCACTCTAAGGAATGA--C-TGTTTTTT s panTro5.chr4 192959399 188 + 194502333 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacgccctactatgtatatcatatgtaaatgtat----aaaatgagataatggtattgaaaatggctttg-aa--------------------------------------aaA-A---A-ATACAAGGGAT-------TGAGTCACTCTAAGGAATGA--C-TGTTTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192841915 188 + 195804263 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacgccctactatgtatatcatatgtaaatgtct----aaaatgagataatggtattgaaaatggctttg-aa--------------------------------------aaA-A---A-ATACAAGGGAT-------TGAGTCACTCTAAGGAATGA--C-TGTTTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875135 187 + 4876863 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacgccctgctatgtatatcatatgtaaatgtct----aaaatgagacaatagtattgaaaatggctttg--a--------------------------------------aaa-A---A-ATGCAAGGGAT-------TGAGTCACTCTAAGGAATGA--C-TGTTTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763039 188 + 115148730 AATGCTGATTTTAgtgcctcaggcaagacacataa-ctttttgggcatcagtttttatatctgt-aaaatgaaaacacgtactctactatgtatatcacatgtaaatgtct----aaaatgagataatagtattgaaaatggccttg-aa--------------------------------------aaa-a---a-gtgcAAGGGAT-------TGATTCACTGTAAGGAATGA--C-GGTTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046102 189 + 190429646 aatactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctactatgtatatcacatgtaaatgtct----aaaatgagatgatagtattgaaaatagctttg-aa--------------------------------------aaA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187988990 189 + 189454096 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctactatgtatatcacatgtaaatgtct----aaaatgagatgatagtattgaaaatagctttg-aa--------------------------------------aaA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380314 189 - 25927173 aatactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacacactactatgtatatcacatgtaaatgtct----aaaatgagatgatagtattgaaaatagctttg-aa--------------------------------------aaA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3409852 177 + 4669795 aatactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctactatgtatatcacatgtaaatgtct----aaaatga------------gaaaatagctttg-aa--------------------------------------aAA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATTA--C-TTTTTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366807 189 + 135778131 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctactatgtatatcacatgtaaatgtct----aaaatgagataatagtattgaaaatagctttg-aa--------------------------------------aaA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827262 177 - 2847728 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctactatgtatatcacatgtaaatgtct----aaaatga------------gaaaatagctttg-aa--------------------------------------aAA-A---ATGTGCAAGGGAT-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i manLeu1.NW_012102221v1 T 6296 C 0 s colAng1.NW_012116221v1 930873 190 + 2368649 AAtactgattttagtgcctcaggcaagacacataa-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacacaccctgctatgtatatcacatgtaaatgtct----aaaatgagataatagtattgaaaatagctttgaaa--------------------------------------aAA-A---ATGTGCAAGGGAA-------GGATTCACTGTAAGGAATGA--C-TTTTTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662565 236 - 190850796 AATACTGATTTTAGTGcctcaggcaagacacatgg-ctttctgggcatcaatttctgtatctgt-aaaatgaaaacacataccctactatgtatattacatgtaaa--tctctaaaaaatgtgataatagtattgaaaatgactttg-aaaaAAATGTGCAAGGGTTCCATCGTGATTCATCATAAGGAAA-A---ACGTGCAAGGGGTTCCATCGTGATTCATTGTAAGGAATGA--C-TTTTTTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13155819 199 - 14256875 AAtactgattttagtgcctcagtcaagacacatag-ctttttgggcatcaatttctatatctgt-aaaatgaaagcacataccctactgtgtatattacatgtaaatgtctataaaaaatgagataatagtattgaaaattactttg-a---------------------------------------aaa-a---atgtgctaGGGGTTCCATCTTGATTATTTGTAAGGAACGA--C-TTTTTTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047508 201 - 2196201 AAtactgattttagtgcctcaggcaagacacatag-ctttttgggcatcaatttttatatctgt-aaaatgaaagcacataccctactatgtatattacatgtaaatgtctaaaaaaagtgagataatagtattgaaaatgactttg-ga--------------------------------------aaa-a---atgtgctaGGGATTCCATCGTGATTCTTTGTAAGGAATGA--CTTTTTTTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433665 199 - 5030052 AATACTGCTTTTAgtgcctcaggcaagacacatag-ctttttgggcatcaatttctatatctgt-aaaatgaaaacacataccctactatgtatattacatgtaaatgtct--aaaaaatgtgataatagtattgaaaatgactttg-aa--------------------------------------aaA-A---ATGTACAAGGGGTTGCATTGTGATTCATTGTAAGGAATGA--CTTTTTTGTT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548338 197 - 93316391 aatactgatttcagtgcttcaggcaaaacacataatctctttggacctcaatttccatatctgt-aaaatgctaaaacacaccctactatgtatctcatgtagaaatgtct----aaaatgaaataatagttttgaaagcgctttTG-AA--------------------------------------AAA-A---AAGGACAAGAGTTTTTATAACGATTCATTTTAAAGAATGA--C-CTTTTTTT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11282731 202 - 11315646 AATACAGACTTTAGCGcttcaggcaagacacataacctctttgggcatcaatttccatatctgc-aaaatgctaaaacacaccccactttgtgtcttatgtgcaaatgtct----aaaatgaaataatagcttttaaagcggttTTG-AA--------------------------------------AAA-AATGATGGGCAAGAGTTTCTATAATGAGTCATTTTAAAGAATGACTC-CCACTTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648517 190 - 129401213 ------GATGTTAGGGTTTCAgacaagacacacaatcttttagggtatcaatttctgtatctgt-taaatggcaatgcataccccaccacacatctcatgttcaactgtct----aaaataggataatggttttgaaagtggttttt-g---------------------------------------aaa-a---atgtgcaaaggattctataaCAAGTTACATTGTGGAATGA--C-CATAGTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16995846 181 - 59632846 aattctgatttttgtgcttcaggcaagacacataacctctttgggcatttatttccttacctgtaaaaataacaaaacataccctactatgtatgtcttgtgaaaatgtat---aaaaatgagatggtagttttgaaagcagttttg-ca--------------------------------------aaa-t---atgtgcAAGAGGTTCTGTAATGATTCATTGT--------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1494367 195 - 2520184 TATACTGATTTTAATCcttcaggcaag-cacatac-ctctttgggcattaatttcc-catctgt-aagatgatagaacaaaccctactatgcatctcatgcataaatgtat----aaaatgagagaatatttttgaaagtggtttgg-aa--------------------------------------aaaga---aagtgccaGGTGTTCTATAATGATTCATTGTAGAGAGTGG--C-CTTATTTT i dasNov3.JH570353 C 0 I 2 a score=28809.000000 s hg38.chr4_KI270789v1_alt 174361 2 + 205944 AG s panTro5.chr4 192959587 2 + 194502333 AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842103 2 + 195804263 AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875322 2 + 4876863 AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763227 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046291 2 + 190429646 AG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989179 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380503 2 - 25927173 AG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410029 2 + 4669795 AG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366996 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827439 2 - 2847728 AG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931063 2 + 2368649 AG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662801 2 - 190850796 AG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156018 2 - 14256875 AG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047709 2 - 2196201 AG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433864 2 - 5030052 AG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548535 2 - 93316391 AG i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11282933 2 - 11315646 TG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648707 2 - 129401213 AG i mm10.chr8 C 0 C 0 e dasNov3.JH570353 1494562 2 - 2520184 I e canFam3.chr16 16996027 0 - 59632846 C a score=628442.000000 s hg38.chr4_KI270789v1_alt 174363 47 + 205944 GAGTCAACAAGAGGCAAAGGAAA--TAAAATTTATTCCAACTAAATGAA s panTro5.chr4 192959589 47 + 194502333 GAGTCAACAAGAGGCAAAGGAAA--TAAAATTTATTCCAACTAAATGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842105 47 + 195804263 GAGTCAACAAGAGGCAAAGGAAA--TAAAATTTATTCCAACTAAATGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875324 47 + 4876863 GAGTCAAGAAGAGGCAAAGGAAA--TAAAATTTATTCCAACTAAATGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763229 47 + 115148730 GAGTCAAGAAGAGGCAAAGGACA--CAAAATTTATTCCAACTAAATGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046293 47 + 190429646 GAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989181 47 + 189454096 GAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380505 47 - 25927173 GAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410031 47 + 4669795 GAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134366998 47 + 135778131 AAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827441 47 - 2847728 AAGTCAAGAAGGGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931065 47 + 2368649 GAGTCAGGAAGGGGCGAAGGAAA--CAAAATTTATTCTAACTAAATGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662803 49 - 190850796 GAGTCAAAAAGAGGCCAAAAAAACCCAAAATTTGTTCCAACTAAATGAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156020 47 - 14256875 GGGTCAAGAAGAGGCAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047711 47 - 2196201 GAGTCAAGAAGAGGGAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433866 47 - 5030052 GAGTCAAGAAGAGGTAAAGGAAA--CAAAATTTATTCCAACTAAATGAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548537 47 - 93316391 GAGTGAAAGAAAGGCAAAGGGAA--CAAAATTCATTCCAACTAAATGAA i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11282935 42 - 11315646 GAGTAAAGGAAAGGCAAAGGGAA--CAAAATTCA-TCTAACTAAA---- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648709 43 - 129401213 GAGTCAGAGAAAAATAGGAGGAA--AAAAAATCATGCCAAATAAA---- i mm10.chr8 C 0 I 28 s dasNov3.JH570353 1494564 47 - 2520184 GAATCAAAGAGAGGCAGGGGGAA--CAAAATTCATTTCAGCTAAATGGA i dasNov3.JH570353 I 2 C 0 e canFam3.chr16 16996027 0 - 59632846 C a score=13923.000000 s hg38.chr4_KI270789v1_alt 174410 1 + 205944 A s panTro5.chr4 192959636 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842152 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875371 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763276 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046340 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989228 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380552 1 - 25927173 A i macNem1.NW_012013133v1 C 0 I 17 s cerAty1.NW_012001672v1 3410078 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367045 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827488 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931112 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662852 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156067 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047758 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433913 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548584 1 - 93316391 A i micMur3.chr14 C 0 C 0 s dasNov3.JH570353 1494611 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16996027 0 - 59632846 C e mm10.chr8 86648752 28 - 129401213 I e otoGar3.GL873580 11282977 0 - 11315646 C a score=24752.000000 s hg38.chr4_KI270789v1_alt 174411 2 + 205944 AA s panTro5.chr4 192959637 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842153 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875372 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763277 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046341 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989229 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3410079 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367046 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827489 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931113 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662853 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156068 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047759 2 - 2196201 AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433914 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548585 2 - 93316391 AA i micMur3.chr14 C 0 I 189 s dasNov3.JH570353 1494612 2 - 2520184 AA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 16996027 0 - 59632846 C e mm10.chr8 86648752 28 - 129401213 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e otoGar3.GL873580 11282977 0 - 11315646 C a score=3600.000000 s hg38.chr4_KI270789v1_alt 174413 1 + 205944 -G s panTro5.chr4 192959639 1 + 194502333 -G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842155 1 + 195804263 -G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875374 1 + 4876863 -G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763279 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046343 1 + 190429646 -G i rheMac8.chr5 C 0 I 14 s macFas5.chr5 187989231 1 + 189454096 -G i macFas5.chr5 C 0 I 6 s cerAty1.NW_012001672v1 3410081 1 + 4669795 -G i cerAty1.NW_012001672v1 C 0 I 14 s chlSab2.chr7 134367048 1 + 135778131 -G i chlSab2.chr7 C 0 I 14 s manLeu1.NW_012102221v1 2827491 1 - 2847728 -G i manLeu1.NW_012102221v1 C 0 I 14 s colAng1.NW_012116221v1 931115 1 + 2368649 -G i colAng1.NW_012116221v1 C 0 I 14 s calJac3.chr3 189662855 1 - 190850796 -G i calJac3.chr3 C 0 I 6 s saiBol1.JH378165 13156070 1 - 14256875 -G i saiBol1.JH378165 C 0 I 6 s cebCap1.NW_016107886v1 1047761 1 - 2196201 -G i cebCap1.NW_016107886v1 C 0 I 14 s aotNan1.NW_018492112v1 3433916 1 - 5030052 -G i aotNan1.NW_018492112v1 C 0 I 14 s dasNov3.JH570353 1494614 1 - 2520184 C- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17548587 189 - 93316391 I e canFam3.chr16 16996027 0 - 59632846 C e mm10.chr8 86648752 28 - 129401213 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e otoGar3.GL873580 11282977 0 - 11315646 C a score=18142.000000 s hg38.chr4_KI270789v1_alt 174414 8 + 205944 -TGTTACTG s panTro5.chr4 192959640 8 + 194502333 -TGTTACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842156 8 + 195804263 -TGTTACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875375 8 + 4876863 -TGTTACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763280 8 + 115148730 -TGTTACTG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187989238 8 + 189454096 -CTTTACTG i macFas5.chr5 I 6 C 0 s calJac3.chr3 189662862 8 - 190850796 -CTTTACTG i calJac3.chr3 I 6 C 0 s saiBol1.JH378165 13156077 8 - 14256875 -CTTTACTG i saiBol1.JH378165 I 6 C 0 s dasNov3.JH570353 1494615 9 - 2520184 AATCTACTG i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1047762 14 - 2196201 I e micMur3.chr14 17548587 189 - 93316391 I e canFam3.chr16 16996027 0 - 59632846 C e mm10.chr8 86648752 28 - 129401213 I e aotNan1.NW_018492112v1 3433917 14 - 5030052 I e colAng1.NW_012116221v1 931116 14 + 2368649 I e manLeu1.NW_012102221v1 2827492 14 - 2847728 I e chlSab2.chr7 134367049 14 + 135778131 I e cerAty1.NW_012001672v1 3410082 14 + 4669795 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e rheMac8.chr5 189046344 14 + 190429646 I e otoGar3.GL873580 11282977 0 - 11315646 C a score=29.000000 s hg38.chr4_KI270789v1_alt 174422 1 + 205944 A s canFam3.chr16 16996027 1 - 59632846 A i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1494624 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189662870 0 - 190850796 C e cebCap1.NW_016107886v1 1047762 14 - 2196201 I e micMur3.chr14 17548587 189 - 93316391 I e mm10.chr8 86648752 28 - 129401213 I e aotNan1.NW_018492112v1 3433917 14 - 5030052 I e saiBol1.JH378165 13156085 0 - 14256875 C e colAng1.NW_012116221v1 931116 14 + 2368649 I e manLeu1.NW_012102221v1 2827492 14 - 2847728 I e chlSab2.chr7 134367049 14 + 135778131 I e cerAty1.NW_012001672v1 3410082 14 + 4669795 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e macFas5.chr5 187989246 0 + 189454096 C e rheMac8.chr5 189046344 14 + 190429646 I e nomLeu3.chr7b 112763288 0 + 115148730 C e gorGor5.CYUI01015356v1 3875383 0 + 4876863 C e panPan2.chr4 192842164 0 + 195804263 C e panTro5.chr4 192959648 0 + 194502333 C e otoGar3.GL873580 11282977 0 - 11315646 C a score=699.000000 s hg38.chr4_KI270789v1_alt 174423 15 + 205944 AATGTTAGCCttttt s canFam3.chr16 16996028 15 - 59632846 GGTGGTGACCTTTTT i canFam3.chr16 C 0 I 68 e calJac3.chr3 189662870 0 - 190850796 C e cebCap1.NW_016107886v1 1047762 14 - 2196201 I e micMur3.chr14 17548587 189 - 93316391 I e dasNov3.JH570353 1494625 0 - 2520184 C e mm10.chr8 86648752 28 - 129401213 I e aotNan1.NW_018492112v1 3433917 14 - 5030052 I e saiBol1.JH378165 13156085 0 - 14256875 C e colAng1.NW_012116221v1 931116 14 + 2368649 I e manLeu1.NW_012102221v1 2827492 14 - 2847728 I e chlSab2.chr7 134367049 14 + 135778131 I e cerAty1.NW_012001672v1 3410082 14 + 4669795 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e macFas5.chr5 187989246 0 + 189454096 C e rheMac8.chr5 189046344 14 + 190429646 I e nomLeu3.chr7b 112763288 0 + 115148730 C e gorGor5.CYUI01015356v1 3875383 0 + 4876863 C e panPan2.chr4 192842164 0 + 195804263 C e panTro5.chr4 192959648 0 + 194502333 C e otoGar3.GL873580 11282977 0 - 11315646 C a score=353.000000 s hg38.chr4_KI270789v1_alt 174438 26 + 205944 tttttttttttttttttgagacggag s otoGar3.GL873580 11282977 10 - 11315646 ----------------TGAGACAGAG i otoGar3.GL873580 C 0 I 20 e calJac3.chr3 189662870 0 - 190850796 C e cebCap1.NW_016107886v1 1047762 14 - 2196201 I e micMur3.chr14 17548587 189 - 93316391 I e dasNov3.JH570353 1494625 0 - 2520184 C e canFam3.chr16 16996043 68 - 59632846 I e mm10.chr8 86648752 28 - 129401213 I e aotNan1.NW_018492112v1 3433917 14 - 5030052 I e saiBol1.JH378165 13156085 0 - 14256875 C e colAng1.NW_012116221v1 931116 14 + 2368649 I e manLeu1.NW_012102221v1 2827492 14 - 2847728 I e chlSab2.chr7 134367049 14 + 135778131 I e cerAty1.NW_012001672v1 3410082 14 + 4669795 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e macFas5.chr5 187989246 0 + 189454096 C e rheMac8.chr5 189046344 14 + 190429646 I e nomLeu3.chr7b 112763288 0 + 115148730 C e gorGor5.CYUI01015356v1 3875383 0 + 4876863 C e panPan2.chr4 192842164 0 + 195804263 C e panTro5.chr4 192959648 0 + 194502333 C a score=0.000000 s hg38.chr4_KI270789v1_alt 174464 272 + 205944 tctcgctctgtcgcccaggctggagtgcaggggcgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccactacgcccggctaattttttgtatttttagtagagacggggtttcaccgttttagccgggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggcc e calJac3.chr3 189662870 0 - 190850796 C e cebCap1.NW_016107886v1 1047762 14 - 2196201 I e micMur3.chr14 17548587 189 - 93316391 I e dasNov3.JH570353 1494625 0 - 2520184 C e canFam3.chr16 16996043 68 - 59632846 I e mm10.chr8 86648752 28 - 129401213 I e aotNan1.NW_018492112v1 3433917 14 - 5030052 I e saiBol1.JH378165 13156085 0 - 14256875 C e colAng1.NW_012116221v1 931116 14 + 2368649 I e manLeu1.NW_012102221v1 2827492 14 - 2847728 I e chlSab2.chr7 134367049 14 + 135778131 I e cerAty1.NW_012001672v1 3410082 14 + 4669795 I e macNem1.NW_012013133v1 24380553 17 - 25927173 I e macFas5.chr5 187989246 0 + 189454096 C e rheMac8.chr5 189046344 14 + 190429646 I e nomLeu3.chr7b 112763288 0 + 115148730 C e gorGor5.CYUI01015356v1 3875383 0 + 4876863 C e panPan2.chr4 192842164 0 + 195804263 C e panTro5.chr4 192959648 0 + 194502333 C e otoGar3.GL873580 11282987 20 - 11315646 I a score=9555.000000 s hg38.chr4_KI270789v1_alt 174736 1 + 205944 A s panTro5.chr4 192959648 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842164 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875383 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763288 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046358 1 + 190429646 A i rheMac8.chr5 I 14 C 0 s macFas5.chr5 187989246 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380570 1 - 25927173 A i macNem1.NW_012013133v1 I 17 C 0 s cerAty1.NW_012001672v1 3410096 1 + 4669795 A i cerAty1.NW_012001672v1 I 14 C 0 s chlSab2.chr7 134367063 1 + 135778131 A i chlSab2.chr7 I 14 C 0 s manLeu1.NW_012102221v1 2827506 1 - 2847728 A i manLeu1.NW_012102221v1 I 14 C 0 s calJac3.chr3 189662870 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156085 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047776 1 - 2196201 A i cebCap1.NW_016107886v1 I 14 C 0 s aotNan1.NW_018492112v1 3433931 1 - 5030052 A i aotNan1.NW_018492112v1 I 14 C 0 e micMur3.chr14 17548587 189 - 93316391 I e dasNov3.JH570353 1494625 0 - 2520184 C e canFam3.chr16 16996043 68 - 59632846 I e mm10.chr8 86648752 28 - 129401213 I e colAng1.NW_012116221v1 931116 14 + 2368649 I e otoGar3.GL873580 11282987 20 - 11315646 I a score=12376.000000 s hg38.chr4_KI270789v1_alt 174737 1 + 205944 A s panTro5.chr4 192959649 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842165 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875384 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763289 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046359 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989247 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380571 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410097 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367064 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827507 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931130 1 + 2368649 A i colAng1.NW_012116221v1 I 14 C 0 s calJac3.chr3 189662871 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156086 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047777 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433932 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1494625 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17548587 189 - 93316391 I e canFam3.chr16 16996043 68 - 59632846 I e mm10.chr8 86648752 28 - 129401213 I e otoGar3.GL873580 11282987 20 - 11315646 I a score=13923.000000 s hg38.chr4_KI270789v1_alt 174738 1 + 205944 A s panTro5.chr4 192959650 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842166 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875385 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763290 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046360 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989248 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380572 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410098 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367065 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827508 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931131 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662872 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156087 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047778 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433933 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86648780 1 - 129401213 A i mm10.chr8 I 28 C 0 s dasNov3.JH570353 1494626 1 - 2520184 A i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17548587 189 - 93316391 I e canFam3.chr16 16996043 68 - 59632846 I e otoGar3.GL873580 11282987 20 - 11315646 I a score=1831951.000000 s hg38.chr4_KI270789v1_alt 174739 164 + 205944 TGTTAGCCTTTTAAGAATACAAAAA----------------------AA---TCTAATTATATATGAATACAATACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGTATTCTAAACATTTGTAGCCAGAATAACTTTCTTCATATT--T--TCCA--CATTCTTGGTACACTTACGTG s panTro5.chr4 192959651 164 + 194502333 TGTTAGCCTTTTAAGAATACAAAAA----------------------AA---TCTAATTATATATGAATACAATACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGTATTCTAAACATTTGTAGCCAGAATAACTTGCTTCATATT--T--TCCA--CATTCTTGGTACACTTACGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842167 164 + 195804263 TGTTAGCCTTTTAAGAATACAAAAA----------------------AA---TCTAATTATATATGAATACAATACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGTATTCTAAACATTTGTAGCCAGAATAACTTTCTTCATATT--T--TCCA--CATTCTTGGTACACTTACGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875386 164 + 4876863 TGTTAGCCTTTTAAGAATGCAAATA----------------------AA---TCTAATTATATATGAATACAATACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGTATTCTAAACATTTGTAGCCAGAATAACTTTCTTCATATT--T--TCCA--CATTCTTGGTACACTTATGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763291 164 + 115148730 TGTTAGCCTTTTAAGAATATAAAAA----------------------AA---TCTAATTATATATGAATCCAATACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATATATTCTAAACATTTGTAGCCAGAATATCTTTCTTCATATT--T--TCCA--CATTCTTGGTACACATATGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046361 164 + 190429646 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATATATGAGTACAGTACCTGAACCCATGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGCATTCTAAACATTTGTAGTCAGAACAACTTTCTTCATATT--T--TGCA--CATTCCTGGTACACATATGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989249 164 + 189454096 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATATATGAGTACAGTACCTGAACCCGTGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGCATTCTAAACATTTGTAGTCAGAACAACTTTCTTCATATT--T--TGCA--CATTCCTGGTACACATATGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380573 164 - 25927173 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATATATGAGTACAGTACCTGAACCTGTGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATACATTCTAAACATTTGTAGTCAGAACAACTTTCTTCATATT--T--TGCA--CATTCCTGGTACACATATGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410099 164 + 4669795 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATATATGAGTACAATACCTGAACCCGTGAAACTTCTGTCGAATACACGAATCTGTAAAGTTATGCATTCTAAACATTTGTAGTCAGAACAACTTTCTTCGTATT--T--TGCA--CATTCCTGGTACACATATGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367066 164 + 135778131 TGTTAGCCTTTTAAGAATACAACCG----------------------TA---TCTAATTATATATGAGTACAATACCTGAACCCGTGAAACTTCTGTAGAATACATGAATCTGTAAAGTTATGCATTCTAAACATTTGTAGTCAGAACAACTTTCTTCGTATT--T--TGCA--CATTCCTGGTACACATATGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827509 164 - 2847728 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATAGATGAGTACAATACCTGAACCCGTGAAACTTCTGTCGAATACATGAATCTGTAAAGTTATGCATTCTAAACATTTGTAGTCAGAACAACTTTCTTCATATT--T--TGCA--CATTCCTGGTACACATATGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931132 164 + 2368649 TGTTAGCCTTTTAAGAATACAACAA----------------------TA---TCTAATTATATATGAGTACAATATCTGAACCTGTGAAGCTTCTGTAGAATACATGAATCTGTACAGTTATGCATTCTAAACGCTTGTAGTCAGAACAACTTTCTTTGTATT--T--TGCA--CATTCCTGGTACACATATGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189662873 164 - 190850796 TGTCAGGCTTTTAAAAATACAAAAA----------------------AAA--TCTAATTATATATGAATACAA-ACCTGAACTCATGAAACTTCTGCAGAATACATGAATTTGTGTAGTTACGCACTCTAAACATTTGTAGTCAGAATAACTTTCTTCACGTG--C--TGCA--CATTCCTGGTACACATATGTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156088 167 - 14256875 TGTTAGGCTTTTAAAAATACAAAAA----------------------AAAGGTCTGATTATATATGAATACAATCCCTGAACTCATGAGACTTCTACAGAATACATGAATTTGTGTACTTATGCATTCTAAACGTTTGTAGTCAGAATAACTTTCTTCACATG--T--TGCA--CATTCCTGGTACACATGTGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047779 157 - 2196201 TGTTAGACTTTTAAAAATACAAAAA----------------------AAA-TTCTAATTATATATGAATACAATACCTGAACTCATGAAACTTCTGCAGAATACATGAATTTGTACAGTTATGCATTCTAAACATTTG---------TAACTTTCTTCATATG--T--TGCA--CATTCCTGGTACACATATGTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3433934 164 - 5030052 TGTTAGGCTTTTAAAAATACAAAAA----------------------AA---TCTAATTATATATGAATACAATACCTGAACTCATGAAACTTCTGCAGAATACATGAATTTGTATAGTTATGCATTCTAAACATTTGTAGTCAGAATAACTTTCTTCATATG--T--TGCA--CATTCTTGGTACACATATGTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11283007 182 - 11315646 TGGTAGGCTTTTAAGATTACAAAAAACAAACAAAAAGAAAAAACCCCAA---ATGAATTTTACATGAATACTA---CCAAACCAGTGAAACTTCAGCACAGTGCAGAAATACGT--AGTTATACATTCTAGAGATTCGTAGTCAAAATACCTCCCTTAATATT--T--TGTATGCATTGC-AGTACACATATGTT i otoGar3.GL873580 I 20 C 0 s mm10.chr8 86648781 134 - 129401213 TGTTAG-------ATAATATAGCAA----------------------TT---TTGGTTT-------AATAGTATATCTAAACCTACAAAACTTCAGTACATAGCATAAATCCCTAAACTCACATATTC----------------AAATAACTACTTTAATAGT--T--CTTA--TGCAACTTATATTCATATGTT i mm10.chr8 C 0 C 0 s canFam3.chr16 16996111 154 - 59632846 TGGTAGGCTTTTAAGATTACAGAAA----------------------GA---ACAGATTTTACATGAAT-----------ACCTATGAAACTTCAA-AGTATATAGGAATCCATAAAGTCATATATTTTCAAGTTTTGTAGTCAAAATAACTTCCTTAATATTTCT--TACA--CATTTTCCATACACATATGCT i canFam3.chr16 I 68 C 0 s dasNov3.JH570353 1494627 162 - 2520184 TGGTTGGTTCTTAAGGTTACAAAAA----------------------GA---ACCAATTTTATATGAATAATATGTCTGAATCCATGGACCTTCTGTAGACTACGAGAATCAAAAAAGTCATTTATTTT-AATATTTGTAGTCCAAATAA-TCCCCTAATATT--TCCTGTG--CATTTCTCACACACATGTT-- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17548587 189 - 93316391 I a score=5284044.000000 s hg38.chr4_KI270789v1_alt 174903 353 + 205944 TCACACATGTTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTACATTGTTATTGTAACTATTTTCCAGGTCTGTCAGTAAAATTTAGTCTCACACATTGATACCACATTCTTGCAATTATATTGTAATTCTCACATAGTAATTCAAGCC--TTTTTGAATATACAAATCATC---------TGAATTTAT-TATATCACTGCTATGACACCTCATACACATGTTGAGACCATTT-ATGCCAGAAAAGATTAGATTTAGTATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGAGAACTTCTATA--GTTTAAATATGCAAATATTCAAAAG-TA s panTro5.chr4 192959815 353 + 194502333 TCACACATGTTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTACATTGTTATTGTAACTATTTTCCAGGTCTGTCAGTAAAATTTAGTCTCACACATTGATACCACATTCTTGCAATTATATTGTAATTCTCACATAGTAATTCAAGCC--TTTTTGAATATACAAATCATC---------TGAATTTAT-TATATCACTGCTATGACACCTCATACACATGTTGAGACCATTT-ATGCCAGAAAAGATTAGATTTAGTATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGAGAACTTCTATA--GTTTAAATATGCAAATACTCAAAAG-TA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842331 353 + 195804263 TCACACATGTTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTACATTGTTATTGTAACTATTTTCCAGGTCTGTCAGTAAAATTTAGTCTCACACATTGATACCACATTCTTGCAATTATATTGTAATTCTCACATAGTAATTCAAGCC--TTTTTGAATATACAAATCATC---------TGAATTTAT-TATATCACTGCTATGACACCTCATACACATGTTGAGACCATTT-ATGCCAGAAAAGATTAGATTTAGTATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGAGAACTTCTATA--GTTTAAATATGCAAATACTCAAAAG-TA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875550 353 + 4876863 TCACATATGTTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTACATTGTTATTGTAACTATTTTCCAGGTCTGTCAGTAAAATTTAGTCTCACACATTGATACCACATTCTTGCAATTATATTGTAATTCTCACATAGTAATTCAAGCC--TTTTTGAATATACAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACCTCATACACATCTTGAGACCATTT-ATGCCAGAAAAGATTAGATTTAGTATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGAGAACTTCTATA--GTTTAAATATGCAAATACTCAAAAG-TA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763455 353 + 115148730 TCACACATGTTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTACATTGTTATTGTAACTATTTTCCAGGTCGGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTATATTGTAATTCTCACATAGTAATTCTAGCC--TTTTTGAATATACAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACCTCATACACATCTTGAGACCATTT-ATGCCAGAAAAGATTAGATTTAGTATTC-AAACAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGAGAACTTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046525 352 + 190429646 TCACACATGTTCTCTGTTTTACAAACAAGGTCAACGTTTTCATTATA-TACATTTACGTGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATATAGAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAATATTC-AAAGAGTCAAATGTCAATAATTCTGGATTGCTTGTCCAAATGGGGAACTCAGATAACTTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989413 352 + 189454096 TCACACATGTTCTCTGTTTTACAAACAAGGTCAACGTTTTCATTATA-TACATTTACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATATAGAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAATATTC-AAAGAGTCAAATGTCAATAATTCTGGATTGCTTGTCCAAATGGGGAACTCAGAAAACTTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24380737 352 - 25927173 TCACACATGTTCTCTGTTTTACAAACAAGGTCAACGTTTTCATTATA-TACATTTACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATATAGAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAATATTC-AAAGAGTCAAATGTCAATAATTCTGGATTGCTTGTCCAAATGGGGAACTCAGATAACTTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410263 352 + 4669795 TCACACATGTTCTCTGTTTTACAAATAAGGTCAACGTTTTCATTATA-TACATTTACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATTTAGAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACTTCATTCGCATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAGTGTTC-AAAGAGTCAAATGTCAATAATTCTGGATTGCTTGTCCAAATGGGGAACTCAGATAACTTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367230 352 + 135778131 TCACACATGTTCCCTGTTTTACAAACAAGGTCAATGTTTTCATTATA-TACATTTACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATATAGAAATCATC---------TAAATTTAT-TGTATCACTGCTATGACACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAGTGTTC-AAAGAGTCAAATGTCAATAATTCTGGATTGCTTGTCCAAATGGGGAACTCAGATAACTTGTACA--GTTTAAATATGCAAATACTCAAAAG-TA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2827673 352 - 2847728 TCACACATGTTCTCTGTTTTACAAACAAGGTCAACGTTTTCATTATA-TACATTTACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATACTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC---TTTTGAATTTAGAAATCATC---------TAAATTTAT-TATATCACTGCTATGAAACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAGTGTCC-AAAGAGTCAAATGTCAATAATTCTGGACTGCTTGTCCAAATGGGGAACTCAGATAACCTGTATA--GTTTAAATATGCAAATACTCAAAAG-TA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931296 353 + 2368649 TCACACATGTTCCCTGTTTTACAAACAAGGTCCATGTTTTCATTATA-TACATTCACATGGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGTAATTCGCACATAGTAATTCTAGCC--TTTTTGAATATAGAAATCATC---------TAAATTTAT-TATACCACTGCTACGACACTTCATTCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAGTGTTC-AAAGAGTCAAATGTCGATAATTCTGGATTGCTTGTCCAAATGGGGAGCTCAGATAACTTGTACA--GTTTAAATATGCAAATACTCAAAAG-TA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663037 353 - 190850796 TCACACATGTTCTCTGTTTTTCAAACAAGGTCAGTGTTTTTATTATA-TACATTTACGTTGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACGTTGATACCACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC--TTTTCGAATATACAAATCATC---------TGAATTTAT-TATATCACTGCTATGACACCTCACACACATCTTGAGACCACTT-AGGCCAGAAAAGATTAGATTTAATATTC-TAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGATAACTTGTGTA--TCTTAAATATGCAAATACTCAAAAG-TA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156255 353 - 14256875 TCACACATGTTCTCTGTTTTTCAAACAAGGTCAGTGTTTTTATTATA-TACATTTACATTGTTATTGTAAGTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACGTTGATACCACATTCTTGCAATTACATTGCAATTCTCACATAGTAAGTCTAGCC--TTTTCGAATACACAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACCTCATGCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAATATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGATAACTTGTATA--GCTTAAATACGCAAATACTCAAAAG-TA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1047936 353 - 2196201 TCACACATGTTCTCTGTTTTTCAGACAAGGTCAGTGTTTTTATTATA-TACATTTACATTGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCCTCACACATTGATACCACATTCTTGCAATTACATTGCAATTCTCACATAGTAATTCTAGCC--TGTTCGAATATACAAATCATC---------TAAATTTAT-TATATCACTGCTATGACACCTCACGCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGACTTAATATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGATAACTTGTATA--GCTTAAATATGCAAATACTCAAAAG-TA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434098 353 - 5030052 TCACACATGTTCTCTGTTTTTCAAACAAGGTCAGTGTTTTTATTATA-TACATTTACATTGTTATTGTAACTGTTTTCCAGGTCTGTCAATAAAATTTAGCTTCACACGTTGATACCACATTCTTTCAATTACATTGCAATTCTCACATAGTAATTCTAGCC--TTTTCGAATATACAAATCATC---------TAAATTTAT-TATATCATTGCTATGACACCTCACGCACATCTTGAGACCATTT-AGGCCAGAAAAGATTAGATTTAATATTC-AAAGAGCCAAATGTAAATAATTCTGGATTGCTTATCCAAATGGGGAACTCAGATAACTTGTACA--GCTTAAATATGCAAATACTCGAAAG-TA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17548776 343 - 93316391 TCACACATGCTCCCTGTTTTTCAAACAAGGTCAATGTTTTCATTACA-TACATTTAAATTGTTATTGTAACTGTTTTCT-GGTCTGTCAATAAAATTTAGCCTCACACAGTGAT---ACATTCTTGCAATTACATTGTAATTCTCACATAGTAATTCTAGCC--TTTTTGAGTACACAAACCATC---------TAAATTTAT-TATATCATTGCTATAACACCTCGTACACATCTTGAGACCATTT-GGGCCTCAA------AGATTTAATATTC-AGAGAGCCAAATGTAAATAATTCTGAATTATTTATCCAAATGGAGAACTCAGATAACTTGTAAA--GTTTAAGTATGCAAATACTCAAAAA-TA i micMur3.chr14 I 189 I 34 s otoGar3.GL873580 11283189 354 - 11315646 TCACACATGTTCCTTATTTTTCAAACAAGGTCAATGTTTTCATTATA-TACATTTAAATTGTTATTGTAACTGTTTTCT-GCTTTGTCAATAACACTTAGTCTCACACATTGATACCACATTCTTGCAATTACACTGTAATTCTCACATAGTAATTCTAGCC--TTTTCAAATATATAAATCCTC---------TAAATTTAT-TATATCATTGCTCTAACACCTCATCCACATCTTGAGACCATTTGGGGCCACAGAGGATTAGATTTAATATTCAAGAGAGCCAAATGTAAATAATTCTGAATCCTTTATCCAAATGGAGAATTCAAATAACTTGCATG--GTTTAAATATGCAGATGTTCAAACA-TA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86648915 335 - 129401213 TCTTACGCATTTTCTGTTTTAGAAAT----CTGATGTTTTCTTTATC-TGCATCCTCACTGTTATTATGCCTGTTCTTTGGGTTTGCTGTTAAAATCTGAAGACGAAAATTAAAAACACATACCTGCAATTACACTGTAATTCACGCACAGTAAGTCTATCTAGCATTTGAAAATAATACACACA---------CATATATATGTATATAA-------AACACTTAA--AACATCCCGACATTAT---AGATGACCTAACATT--ATTTAATATTC-AAAGGACCAAACATAAATAATT------TATTTATACAATTGGAGATGTCAGGTAATCTGTATGGTGTGTATATATCCCAATACACAAGAA-CA i mm10.chr8 C 0 I 27 s canFam3.chr16 16996265 343 - 59632846 TCACACATGCTCCCTGTTTCTCAGACAAGGTCAACATTTTCACTACATTTCATTTACATTGTTATTAGAACTCTTTTCTAGGTCTGTCAATAAAATGTGGCCTCACACATTGATAACACATTTTTGTAATTATGTTGTAATTTTCAC-TAGTAATCCTAGCT--TTTTTGAATATACAAATCATT---------TCAACTTAT-TATATCATTGCTATAATACTTCATAGGCAT-----------TT-AGACCACAAAAGATTAGCTTTAATATGA-AAAGGACCAAATGTAAATAATTCTTGATGACTTATCCAAATGGAAGACTCAAACAGCGTGTATA--GTCTAAATATGCAAATAGTCAGAAGATA i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1494789 357 - 2520184 TTACACATGCTCCTCATTTT-CAGACAAAGTCAATGTTTTCATTATA-CACACTCATGTTGTTATTGTAACTGTTTTCTGGGTCTGTTAATAAAATTCGACCTCACACATTGGTAATACATTCCTGAAATTACATTATAATTCTTAC-TGGTAATTCTAGCT--TTATTGTATATACAAATGGTCCTACTCTATTATGTCTAT-TATGTCATTGCTATGATGCCTC-TACACATTTTGAGACCACTG-AGGTCACAAACGATTAGATTTAATATTC-AAAGAGCAACTTGCAAATAACTATGAATTATCCATACAAATGGAAGACTCAGATAACTCATATA--GTTTAAATATGCAAATAATAAGAAT--- i dasNov3.JH570353 C 0 C 0 a score=396700.000000 s hg38.chr4_KI270789v1_alt 175256 46 + 205944 ATTTTT----------------------------------------------------------TTGTGACCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC s panTro5.chr4 192960168 46 + 194502333 ATTTTT----------------------------------------------------------TTGTGACCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842684 46 + 195804263 ATTTTT----------------------------------------------------------TTGTGACCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875903 46 + 4876863 ATTTTT----------------------------------------------------------TTGTGACCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763808 44 + 115148730 ATTTTT----------------------------------------------------------TTGTGACCATACCCT----------------------------------CCTGCTACTGA--GTTTCCTTGAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046877 46 + 190429646 ATTTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989765 46 + 189454096 ATTTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381089 46 - 25927173 ATTTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410615 46 + 4669795 ATTTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAACGTTTCCTTGAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367582 46 + 135778131 ATTTTT----------------------------------------------------------TTGTTCCCACACCCT----------------------------------CCTGCTACTGAACGTTTCCTTGAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828025 46 - 2847728 ATTTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAACGTTTCCTTGAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931649 46 + 2368649 ATGTTT----------------------------------------------------------TTGTTCCCATACCCT----------------------------------CCTGCTACTGAATGTTTCCTTGAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663390 45 - 190850796 ATTTTG------------------------------------------------------GTTATTGT-----TGCCCT----------------------------------CCTGCTACCGAGTGTCTCCCTGAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156608 46 - 14256875 AATCTT------------------------------------------------------GTTGTTAT---CACACCCT----------------------------------CCTGCTA-CAAGCGTCTCCTCGAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048289 49 - 2196201 ATTTTC------------------------------------------------------GTTGTTGTTACCACACACC----------------------------------CCTCTCA-GGAGTGTCTCCTGGAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434451 50 - 5030052 GTTTTT------------------------------------------------------GTTGTTGTTACCATGGCCT----------------------------------CCTGCTACTGAGTGTCTCCTTGAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11283543 47 - 11315646 -TTTTT------------------------------------------------------AT--TTTTAACTTCAGCAT----------------------------------GCTGCTAGTGAATGATTCCTTGAGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86649277 138 - 129401213 ATTTTATTACACTTTAAGTCCCATCGGTTTTGTATGCAGCAGCATAGCACTTGTAAGGACGTCATTATCAGCATATTGTTGAATATGTGAAGAAACTGTAAACTTTATGATACCCTGTTTCCAAATGCTTCCTTGACA i mm10.chr8 I 27 C 0 s canFam3.chr16 16996611 37 - 59632846 ATTCTT-------------------------------------------------------------------TATCCT----------------------------------CCTGCTACTGAATGCTTCCCTGAAT i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1495146 41 - 2520184 ATTCTT----------------------------------------------------------TCATAATCAT---------------------------------------CCTGCTGCTGAATGTTTCCTTGAGT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549119 34 - 93316391 I a score=1550585.000000 s hg38.chr4_KI270789v1_alt 175302 110 + 205944 TGGTGTCAGAAGCAGGGTTTACAATGTTGTGCTCTATTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT s panTro5.chr4 192960214 106 + 194502333 TGGTGTCAGAAGCAGGGTTTACAATGTTGTGCTCTATTTCCTGTTTAACCTGTTGCCAAGATGTTAATTCACAGTGAAATAATAAGAACTTAG----AACTGGGGGTGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842730 106 + 195804263 TGGTGTCAGAAGCAGGGTTTACAATGTTGTGCTCTATTTCCTGTTTAACCTGTTGCCAAGATGTTAATTCACAGTGAAATAATAAGAACTTAG----AACTGGGGGTGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3875949 106 + 4876863 TGGTGTCAGAAGCAGGGTTTACAATGTTGTGCTCTATTTCCTGTTTAACCTGTTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAG----AACTGGGGGTGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763852 107 + 115148730 TGGTGTCAGAAGCAGGGTTTACAA---TGTGCTCTATTTCCTGTTTAACCCATTGCCAAGATGTTAATTCAGGGTGAAATAATAAGAACTTAGCGAGAACTGGGGGTGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189046923 110 + 190429646 TGGTGTCAGAAGCAGGGTTTACAGTGTTGTACTCTATTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAACAATAAGAACTTAGTGAGAACTGGGGGTGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989811 110 + 189454096 TGGTGTCAGAAGCAGGGTTTACAGTGTTGTACTCTATTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAACAATAAGAACTTAGTGAGAACTGGGGGTGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381135 110 - 25927173 TGGTGTCAGAAGCAGGGTTTACAGTGTTGTACTCTATTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAACAATAAGAACTTAGTGAGAACTGGGGGTGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410661 110 + 4669795 TGGTGTCGGAAGCAGGGTTTACAGTGCTGTGCTCTGTTTCCTGTTTAACCCATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367628 109 + 135778131 TGGTGTCAGAAG-AGGGTTTACAGTGTTGTGCTCTGTTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828071 110 - 2847728 TGGTGTCAGAAGCAGGGTTTACAGTGTTGTGCTCTGTTTCCTGTTTAACCCATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931695 110 + 2368649 TGGTGTCAGAAGCAGGGTTTACAGTGTTGTCCTCTATTTCCTGTTTAACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663435 100 - 190850796 -GGCGTCAGAAGCAGG---------CTTGTGCTCTGGTTCCTGTTAGACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGCGAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156654 110 - 14256875 TGGTGTCAGAAGCAGGGCTGACAGTGTTGTGCTCTAGTTCCTGTCTGACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048338 110 - 2196201 CGGTGTCAGAAGCAGGGCTGACGGTGTTGTGCTCCAGTTCCTCTTTGACCTATTGCCAAGATGTTAATTCAGAGTGAAATAATAAGAACGTAGTGAGAACTGGGGGTGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434501 110 - 5030052 TGGCATCAGAAGCAGGGTTGACAGTGTTGTGCTCTAGTTCCTGTTTGACCTATTGCCAAGGTGTTAATTCAGAGTGAAATAATAAGAACTTAGTGAGAACTGGGGGTGAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17549153 110 - 93316391 TTGTGTTAGAAGCAGGGTTTACATTGTTGTACTATATTTCCTATTTTTCCTATTGCCAAGATGTTAATTCAAAGTGAAATGATGAAAAGTTAGTGAGAACTGCAGGTGAT i micMur3.chr14 I 34 I 142 s otoGar3.GL873580 11283590 109 - 11315646 TGGTGTCAGAAGCAGGGCTTGCAGTGCAGTGCTCTATTTCTGGTTTTTCCTGTTGTCAAGATGTTAATTCAAAGTGAAATGATAAAAGCTTAGTGCG-ACTATGGGGGAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86649415 103 - 129401213 TGCTGTCAGAA--AGGCTTTTCAGGGAAGTGTTTTATTTCCTGTTTGCCCTCTTGTCGATATGCTAA-TCAGCAAACAATGATAAAAA-TCGGGAAGAACTAGTGCT--- i mm10.chr8 C 0 C 0 s canFam3.chr16 16996648 110 - 59632846 TGCTGTCAGAAGCAGGATTTACAGCGTTGTGCTTTAATTCCTGCTTACTCTCTTGTCAAGATGCCAATTAAAAGCAAAATGATAAAAACTCAGTGAGAACTAAGAGTGAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1495187 110 - 2520184 TTCTGTTCGAGGCAGGGTTTACAGTACTGTACGTTATTTCCTGCTTATTCTTTTGTCAAGAAGCTAATTTAAAATAAAATGATAAATATTCAGTGACAACTAGAGGTGAT i dasNov3.JH570353 C 0 I 1 a score=1337071.000000 s hg38.chr4_KI270789v1_alt 175412 134 + 205944 AAACAAAGTGTCCTCACAGCGGAGAAACTGGAAAATGTATCCTTGAAAGCGTGTGAATCGGGTGAGCGTACAACGGGTAACATCAGTATTGGTGTTCTC-----ACTGCTGGGTCAG--CACTGACCAGCAGAGTCTGGTG s panTro5.chr4 192960320 134 + 194502333 AAACAAAGTGTCCGCACAGCGGAGAAACTGGAAATTGTATCCTTGAAAGCGTGTGAATCGGGTGAGCGTACAACGGGTAACATCAGTATTGGTGTTCTC-----ACTGCTGGGTCAG--CACTGACCAGCAGAGTCTGGTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842836 134 + 195804263 AAACAAAGTGTCCGCACAGTGGAGAAACTGGAAAATGTATCCTTGAAAGCGTGTGAATCGGGTGAGCGTACAACGGGTAACATCAGTATTGGTGTTCTC-----ACTGCTGGGTCAG--CACTGACCAGCAGAGTCTGGTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876055 134 + 4876863 AAACAAAGTGTCCGCACAGCGGAGAAACTGGAAAATGTATCCTTGAAAGCGTGTGAATCGGGTGAGCGTACAGCAGGTAACATCAGTATTGGTGTTCTC-----ACTGCTGGGTCAA--CACTGACCAGCAGAGTCTGGTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112763959 135 + 115148730 ----AAAGTGTCCGCACAGTGGAGAAACTGGAAAATGTATCCTTGAAAGCATATGAATCGGGTGAGCGTACAATGGGTAACATCAGTATTGGTGTTCTCTCCTGACTGCTGGGTCAG--CACTGACCAGCAGAGTCCGGTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047033 139 + 190429646 AAACAAAGTGTCAGCACAGCAGAGAGACTGGAAAATGCATCCTCGAAAGCATATGAATCGGGTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCGG--CACTGACCAGCAGAGTCTCGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187989921 139 + 189454096 AAGCAAAGTGTCAGCACAGCAGAGAGACTGGAAAATGCATCCTCGAAAGCATATGAATCGGGTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCGG--CACTGACCAGCAGAGTCTGGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381245 139 - 25927173 AAACAAAGTGTCAGCACAGCAGAGAGACTGGAAAATGCATCCTCGAAAGCATATGAATCGGGTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCGG--CACTGACCAGCAGAGTCTGGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410771 138 + 4669795 AA-CAAAGTGTCGGCACAGCAGAGAAACTGGAAAATGCGTCCTCGAAAGCATATGAATCGGCTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCAG--CACTGACCAGCAGAGTCTGGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367737 139 + 135778131 AAACAAAGTGTCGGCACAGCAGAGAAACTGGAAAATGCGTCCTCGAAAGCATATGAATCGGGTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCGG--CACTGACCAGCAGAGTCTGGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828181 139 - 2847728 CAACGAAGTGTCGGCACAGCAGAGAGACTGGAAAATGCGTCCTCGAAAGCATATGAATCGGGTGAGTGTACAATGGGTAACATCAGCATTGGCGTTCTCTCCTCGCTACTGGGTCAG--CACTGACCAGCAGAGTCTGGTG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931805 139 + 2368649 AAACAAAGTGTCAGCACAGCAGAGAAACTGGAAAATGTGTCCTTGAAAGCATGTGAATCCGGTGAGTGTACAATGGGTAACATCAGTACTGGCATTCTCTCCTCGCTACTGGGTCGG--CGCTGACCAGCAGAGTCTGGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663535 137 - 190850796 AAACAAAGTGTCAGCACAGTGTAGAAACTGCAGAATGTGCCCTAGAAGGCAGATGAGTTGGGTGAGCATACAGTGGCCAACATCAATATTTGCATTCTCTCTTCGCAGCTGGGTCAG--CCCTGACCAGCACAGTC--ATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156764 135 - 14256875 -AACGAAGTGTCAGCACAGTGTAGAAACTGCAGAATGTGCCCTAGAAGGCAGATGAGTTGGGTGAGCACACAGCAGCCAACAACAATGTTGG--TTCTCTCTTCGCTGCTGGGTCAG--CCCTGACCAGCAGAGTCT-GGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048448 117 - 2196201 ----AAAGTGTCAGCACAGTGTAGAAACTACAGAATGTGTCCTAGAAGGCAGATGAGTTGGGTGGGCATACAGCGGCCAACATCAATATTGGTGTTCTCTCTTCGCTGATGGGTCAG--CCCT------------------ i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434611 138 - 5030052 AAACAAAGTGTCAGCACAGTGTAGAAACTGCAGAATGTGCCCTAGAAGGCAGATGAGTTGGGTGAGCATACAGTGGCCAACATCAATATTGGTGTTCTCTCTTCGCTG-TGGGTCAG--CCCTGACCAGCACAGTCTGGTG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11283699 126 - 11315646 TTACAAGGTGCCGGTATGATGCAGTCATCAGAAAACGTGTCCTTTAAACCATATTAGTAGTTATAGCAAATACTGGGTAGTGTCAGTAGTGGTTTCCTCTCCCTGTGGCCGGGTCAG-ACACTAATG-------------- i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86649518 128 - 129401213 TGAGAAAGTGTGAGCACGTCTCAGAATTTGGAAACTGTGCCCAGGAAAACGTATTAGTTGGCTTAGCATACAGTACGTGACACCAATATTAGTTTTCTT-CCTCGTCAT---GTCAA-ACCTTGATAGATATC-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 16996758 127 - 59632846 AAACAAAGGGCCAGCATAATTTGGAAATTGGAAAATGTGCCCTTGAAAACATGTTAGTTGGCTTAGCTTGTCATGTGTAACAGCAGTATTGGTTTTCTCTCTTCACTGCTGGGTCAAGACACTGATG-------------- i canFam3.chr16 C 0 I 5 s dasNov3.JH570353 1495298 133 - 2520184 AAAAAAAATGTCCGCATAATTCAGAGACTGGAAAATGTCCCTTGGAAAACGTGTCCATTGGCTGAGTGTGAAAGGTGGAGCATCAGTGTGGG-ATTCTCTCTCCACTGCTGAGTTAAGACACAGATGGATGGAG------- i dasNov3.JH570353 I 1 C 0 e micMur3.chr14 17549263 142 - 93316391 I a score=679228.000000 s hg38.chr4_KI270789v1_alt 175546 55 + 205944 GGAGCCAGCAGGACCAGAAACATGTCCTCAGTTTGGGCCAATTTAAAGAA-GTTGG s panTro5.chr4 192960454 55 + 194502333 GGAGCCAGCAGGACCAGAAACATGTCCTCAGTTTGGGCCAATTTCAAGAA-GTTGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192842970 55 + 195804263 GGAGCCAGCAGGACCAGAAACATGTCCTCAGTTTGGGCCAATTTCAAGAA-GTTGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876189 55 + 4876863 GGAGCCAGCAGGACCAGAAACATGTCCTCAGTTTGGGCCAATTTCAAGAA-GTTGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764094 55 + 115148730 GGAGCCAGCAGGACCAGAGACATGTCCTCAGTTTGGGTCAATTTAAAGAA-GTTGG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047172 55 + 190429646 GGAGCCAGCAGGACCAGAAACATATCCTCAGTTTGGGTCACTTTAAAGAA-GTTGG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990060 55 + 189454096 GGAGCCAGCAGGACCAGAAACATATCCTCAGTTTGGGTCACTTTAAAGAA-GTTGG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381384 55 - 25927173 GGAGCCAGCAGGACCAGAAACATATCCTCAGTTTGGGTCACTTTAAAGAA-GTTGG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410909 55 + 4669795 GGAGCCAGCGGGACCAGAAACATATCCTCAGTTTGGGTCAATTTAAAGAA-GTTGG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367876 55 + 135778131 GGAGCCAGCGGGACCAGAAACATATCCTCAGTTTGGGTCAATTTAAAGAA-GTTGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828320 55 - 2847728 GGAGCCAGCGGGACCAGAAACATATCCTCAGTTTGGGTCAATTTAAAGAA-GTTGG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931944 55 + 2368649 GGAGCCAGCAGGACCAGAAACATATCCTCAGTTTGGGTCAATTTAAAGAA-GTTGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663672 55 - 190850796 GGAGCCAGCAGTACCCGAATCATATCCTCAGTTTGGGTCTATTTGCAGAA-GTTGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156899 55 - 14256875 GGAGCCAGGAGGACCCGACACATATCCTCAGTTTGGGTCGATTGACAGAA-GTCGG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048565 54 - 2196201 -GAGCCAGCAGGACCCGAGACATATCCTCAGTTTGGGTCGATTTACAGAA-GTCGG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434749 55 - 5030052 GGAGCCAGCAGGACCTGAAACATATCCTCAGTGTGGGTCAATTTACAGAA-GTTGG i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17549405 55 - 93316391 GGAGCCAGCCAGGCCAAAAACATGTCATCAGTTTGGGTCAATTTAAAGAG-GTGGG i micMur3.chr14 I 142 C 0 s otoGar3.GL873580 11283825 49 - 11315646 GAAGCTA------CTGAAAAAGCCTCATCAGTTTGGGTCAGTTTAAAGAG-ATGAG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86649646 53 - 129401213 GGAGATAATAAGAGCTAAACCATG--AATGGTTTCGATCAATTTAAAGTA-CAGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 16996890 56 - 59632846 GGGAATGGCAGGGCCAGAAACAGATTTTCAGTTGGGGTCCATGTGAAGAGCATAGG i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1495431 41 - 2520184 ---------GGGTCC-----CAGGCCATCAGTGTAGACCAGCCTAAAGGG-GTTAG i dasNov3.JH570353 C 0 I 2953 a score=106441.000000 s hg38.chr4_KI270789v1_alt 175601 9 + 205944 GAAGCTTTC s panTro5.chr4 192960509 9 + 194502333 GACGCTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843025 9 + 195804263 GACGCTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876244 9 + 4876863 GAAGCTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764149 9 + 115148730 GAGGCTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047227 9 + 190429646 GAGGCTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990115 9 + 189454096 GAGGCTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381439 9 - 25927173 GAGGCTTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410964 9 + 4669795 GAGGCTTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367931 9 + 135778131 GAGGCTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828375 9 - 2847728 GAGGCTTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 931999 9 + 2368649 GAGGCTTCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663727 9 - 190850796 GAGGCTTTC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156954 9 - 14256875 GAGGCTGTC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048619 9 - 2196201 GAGGCTTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434804 9 - 5030052 GAGGCTTTC i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17549460 9 - 93316391 GAAACTTTC i micMur3.chr14 C 0 I 850 s otoGar3.GL873580 11283874 9 - 11315646 AGAACTTCC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86649699 9 - 129401213 AAATATTGC i mm10.chr8 C 0 I 4 s canFam3.chr16 16996946 9 - 59632846 AAAGCTTCC i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1495472 2953 - 2520184 I a score=602638.000000 s hg38.chr4_KI270789v1_alt 175610 61 + 205944 TAGAGCCCGGCC-GTGTGTCTCTGCCCTTGCTACAACTCCTCCCTCTGTCTCACAGCCAGAG s panTro5.chr4 192960518 61 + 194502333 TAGAGCCCGGCC-GTGTGTCTCTGCCCTTGCTACAACTCCTCCCTCTGTCTCACAGCCAGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843034 61 + 195804263 TAGAGCCCGGCC-GTGTGTCTCTGCCCTTGCTACAACTCCTCCCTCTGTCTCACAGCCAGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876253 61 + 4876863 TAGAGCCCGGCT-GTGTGTCTCTGCCCTTGCTACAACTCCTCCCTCTGTCTCACAGCCAGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764158 61 + 115148730 TAGAGCCCGGCC-ATGTGTCTCTGCCCTTGCTACAACTCCTCCCTCTGTCTCACAGCCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047236 61 + 190429646 TAGAGCCCGATT-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990124 61 + 189454096 TAGAGCCCGGTT-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381448 61 - 25927173 TAGAGCCCGGTT-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3410973 61 + 4669795 TAGAGCCCGGTC-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134367940 61 + 135778131 TAGAGCCCCGTC-GTGTCTCTCCGCACTTGCTACAACTCCTCCCTGTTTCTCACAGCCAGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828384 61 - 2847728 TAGAGCCTGGTC-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932008 61 + 2368649 TAGAGCCCGGTC-GTGTCTCTCTGCACTTGCTACAACTCCTCCCTCTTTCTCACAGCCAGAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663736 61 - 190850796 TAAAGCCCGGCT-GTGTCTCTCCACCTTTGCTACCACTTATTCCCCTGTCGCACAGCCAGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13156963 61 - 14256875 TATAGCCCGGCT-GTGTCTCTCCGCCCTTGCTACCCCTTCTCCCTCTGTCTCACAGCCAGAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048628 59 - 2196201 CAGAGCCCGGTT-GTGTCCCTCTGCC-TTGCTGCCACTTCTCCCTCTGTCGCACA-CCAGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434813 61 - 5030052 CAGAGCCCGGCT-GTGTCTCTCCACCCTTGCTACCACTTCTCCCTCTGTCGCACAGCCAGAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11283883 61 - 11315646 CAGAGCCTGACCAATGTCCTTTCACACTGGCTACAACCCATCCATCTGTCACA-GGCCTGAG i otoGar3.GL873580 C 0 I 6 s mm10.chr8 86649712 53 - 129401213 TAGA---------GAACATTTCTTCACTAGCTAGAACTCTTCGGTGTGTCACAACACCTGAG i mm10.chr8 I 4 C 0 s canFam3.chr16 16996955 54 - 59632846 CCAAGCCTGGCGAATATCTTGTGCCATTGGCTAACACTCCTTGGTCTGCCTTGC-------- i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I a score=12376.000000 s hg38.chr4_KI270789v1_alt 175671 1 + 205944 A s panTro5.chr4 192960579 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843095 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876314 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764219 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047297 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990185 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381509 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411034 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368001 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828445 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932069 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189663797 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157024 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048687 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434874 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86649765 1 - 129401213 A i mm10.chr8 C 0 I 266 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16997009 0 - 59632846 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=10920.000000 s hg38.chr4_KI270789v1_alt 175672 1 + 205944 T s panTro5.chr4 192960580 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843096 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876315 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764220 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047298 1 + 190429646 T i rheMac8.chr5 C 0 I 72 s macFas5.chr5 187990186 1 + 189454096 T i macFas5.chr5 C 0 I 1 s macNem1.NW_012013133v1 24381510 1 - 25927173 T i macNem1.NW_012013133v1 C 0 I 72 s cerAty1.NW_012001672v1 3411035 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 I 72 s chlSab2.chr7 134368002 1 + 135778131 T i chlSab2.chr7 C 0 I 73 s manLeu1.NW_012102221v1 2828446 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 I 72 s colAng1.NW_012116221v1 932070 1 + 2368649 T i colAng1.NW_012116221v1 C 0 I 72 s calJac3.chr3 189663798 1 - 190850796 T i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13157025 1 - 14256875 T i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 1048688 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3434875 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 I 1 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16997009 0 - 59632846 C e mm10.chr8 86649766 266 - 129401213 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=7951.000000 s hg38.chr4_KI270789v1_alt 175673 5 + 205944 GCACC s panTro5.chr4 192960581 5 + 194502333 GCACC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843097 5 + 195804263 GCACC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876316 4 + 4876863 TCA-C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764221 5 + 115148730 TCACC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187990188 5 + 189454096 TCACG i macFas5.chr5 I 1 C 0 s calJac3.chr3 189663800 5 - 190850796 TCACA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13157027 5 - 14256875 TCACC i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1048690 5 - 2196201 TCATC i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3434877 5 - 5030052 TCACC i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 16997009 2 - 59632846 ---CC i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86649766 266 - 129401213 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=43171.000000 s hg38.chr4_KI270789v1_alt 175678 11 + 205944 CATGATGACAT s panTro5.chr4 192960586 11 + 194502333 CATGATGACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843102 11 + 195804263 CATGATGACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876320 11 + 4876863 CATGATGACAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764226 11 + 115148730 CAGGATGACAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187990193 11 + 189454096 CAGGATGACAT i macFas5.chr5 C 0 I 50 s calJac3.chr3 189663805 11 - 190850796 CAGGACGACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157032 11 - 14256875 CAGGACGACAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1048695 11 - 2196201 CAGGACAACAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434882 11 - 5030052 CAGGACGACGT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650032 11 - 129401213 CATGCTTACCT i mm10.chr8 I 266 C 0 s canFam3.chr16 16997011 11 - 59632846 CAATCTGACAT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=794015.000000 s hg38.chr4_KI270789v1_alt 175689 272 + 205944 TCATGTAGGCTATTAAGGGCGAGCATTTCTCGGAAGGTGAAGCAAGAT-ATGGTAGTCA------T------TCCAAGAAACCTTCCTTCTCAGCTGCGATTTGTCAAGAGGAAAGAAGTGGAGTTTTCAGTGGAAAGCAGATGTGAATTTGGAGCAGTGGGGCA-CTTCCAGAGAAT-GAGCCCGGGTCAATTTTCATAGGCAATTGGCAA-CATGAATGCATAGGCACT---GGGAAGAATGTAAATGGCAAGTCCAGGAAGCAAGTAGTAGCTAACAAAT-----GCGTGAAA s panTro5.chr4 192960597 272 + 194502333 TCATGTAGGCTATTAAGGGCGAGCATTTCTCAGAAGGTGAAGCAAGAT-ATGGTAGTCA------T------TCCAAGAAACCTTCCTTCTCAGCTGCGATTTGTCAAGAGGAAAGAAGTGGAGTTTTCAGTGGAAAGCAGATGTGAATTTGGAGCAGTGGGGCA-CTTCCAGAGAAT-GAGCCCGGGTCAATTTTCATAGGCAATTGGCAA-CATGAATGCATAGGCACT---GGGAAGAATGTAAATGGCAAGTCTAGGAAGAAAGTAGTAGCTAACAAAT-----GCATGAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843113 272 + 195804263 TCATGTAGGCTATTAAGGGCGAGCATTTCTCAGAAGGTGAAGCAAGAT-ATGGTAGTCA------T------TCCAAGAAACCTTCCTTCTCAGCTGCGATTTGTCAAGAGGAAAGAAGTGGAGTTTTCAGTGGAAAGCAGATGTGAATTTGGAGCAGTGGGGCA-CTTCCAGAGAAT-GAGCCCGGGTCAATTTTCATAGGCAATTGGCAA-CATGAATGCATAGGCACT---GGGAAGAATGTAAATGGCAAGTCTAGGAAGAAAGTAGTAGCTAACAAAT-----GCATGAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876331 269 + 4876863 TCATGTAGGCTATTAAGGGCGAGCATTTCTCGGAAGGTGAAGCAATAT-ATGGTGGTCA------T------TCCAAGAAAC---CCTTCTCAGCTGTGATTTGTCAAGAGGAAAGAAGTGGAGTTTTCAGTGGAAAGCAGATGTGAATTTGGAGCAGTGGGGCA-CTTCCAGAGAAT-GAGCCCTGGTCAATTTTCATAGGCAATTGGCAA-CATGAATGCATAGGCACT---GGGAAGAATGTAAATGGCAAGTCCAGGAAGCAAGTAGCAGCTAACAAAT-----GCATGAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764237 267 + 115148730 TCATGTAGGATATTAAGGACAAGCATTTCTCGGAAGCTTAAGCAAGAT-ATGATAGTCA------T------TCCAAAAAGC-TTCCTTCTCAGCTGTGATTTGTCAAGAGGAAAGAAGTGGAGTTT----GGGAAAGCAGATATTAATTTGGAGCAGTGGGGCA-CTTCCAGAGAAT-GAGCCCTGGTCAATTTTCATAGGCAGCTGGCAA-CATGAATGCATAGGCACT---GGGAAGAATGCAAATGGCAAGTCCAGGAAGCAAGTAGCAGCCAACAAAT-----GCATGAAA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189663816 261 - 190850796 TCATGTAGGCTATTAAGGGCAAGCATTTCTGGGAAGCTTAAACAAGAT-ATGCTGGTCA------T------TCCCAGAAACCTTCCTTCTCAGCTGTGATCTGTGAAGAAGAAACAACTGGAGTTTTCAGTGGAAAGTGGATATTAATTTGGGGCACTGGGGCA-CTTCCAGAGAAT-GAGCCCTGGTCAGTTCTCACAG------------AAGGAATACACAGGCACT---GGGAAGAATGAGACTGGCAAGACTAGGAAGCAGGCAGCAGCCAACAGAT-----GCGTGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157043 272 - 14256875 TCATGCAGTCTACTAAGGGCAAGCGTTTCTGGGAAGCTTAAACAAGAT-ATGCCGGTCA------T------TCCCAGAAATCTTTCTTCTCAGCTGTGATTTGTCAAGAAGAAACAACTGGAATTTTCAGTGGAAAGTGGATATTAATTTGGAGCACT-GGGCA-CTTCCGGAGAAT-GAGTCCTGGTCAGTATTCACAGGCAGTTGGCAGTGGGGAATACACAGGCACT---GGGAAGAATGAAGCTGGCAGGACTAGGAAGCAGGAAGCAGCCCACAGAT-----GCGTGAAA i saiBol1.JH378165 C 0 I 8 s cebCap1.NW_016107886v1 1048706 254 - 2196201 TCATGTAGGCTACTAAGGGCAAGCACTTCTAGGAAGCTTAAACAAGAT-ACGCTGGTCA------T------TCCCAGAAACCTTCCTTCTCAGCTGTGATTTGTCAAGAAGAGACAACTGGAGTTTTCCGTGGAAAGTGGATATTAATTTGGAGCACTGGGGCA-CTTCCAGAGAAT-GGGCCCTGCTCAGTATTCACAGGCAGTTGGCAG-TGGGAATACACAGGCGCT---GGGAAGAATGAA------------------CCGGGAGCAGCCAGCAGGT-----GCGTGAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3434893 272 - 5030052 TCGTGTAGGCTATTAAGGGCAAGCATTTCTAGGAAGCTTAAACAAGAT-ATGCTGGTCA------T------TCCCAGAAATCTTCCTTCTCAGCTGTGATTTGTCAAGAAGAAACAACTGTAGTTTTCAGTGGAAAGTGGATATTAATTTGGAGCACTGGGGCA-CTTCCAGAGAAT-GAGCCCTGGTCAGTATTCACAGGCAGTTGGCAG-TAGGAGTACACAGGCACT---GGGAAGAATGAAACTGGCAAGACTAGGAAGCAGGGAGCAGCCAACAGAT-----GTGTGAAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650043 277 - 129401213 TCTCATTGTCGGTCGCATGCACTTATTTCTAGAAAGCCAAAGCAAGGTAATGGACGTCATCGCTCT------TTCAAGAAAGCT-CTGGACAAGCAGCAAT---TAAACAAGGAAGAAGTGGAGATTTCAGC-----GTAGCGATGAATTTGGAGCACCGTGGCT-TCTGCAGGGAA--GAGTTACACAGAGTAGGCGTTATCAGTGGGCAT-CACAAGTGCACAGTCTCTCAGGGGAAGAACGTAGATAGAGGCATTAGGAAGTGAGTGGTGGCAGTTAAGTGTAGGGTATGAAA i mm10.chr8 C 0 I 2 s canFam3.chr16 16997022 259 - 59632846 TCGGTTAGGTGATTAAGTGCAAATATCTCCAGGAAGCTTAAGCAAGAT-ACGGTAGCCA------TTCCAACTCCAAGAAAGTTTCTCTCTTAGTTGTGATTAACCAAAAAGAAAGAGATAAAGTTTTTACTGGAAAGCAGAGATGAACTTGGAGCACTGAGACATTTTTCAGAGAAGAGAGACCTGGTAAATCTTACTAACTAATGGAAAA-CATAAA-ACATAGAAGTC--AAAGGAGAATGAAAA---------------------GGCAGTAAACAAAC-----ACAGAAAA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e macFas5.chr5 187990204 50 + 189454096 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=48624.000000 s hg38.chr4_KI270789v1_alt 175961 23 + 205944 GAGTAGAGGAGTAAAATAACGAT-------------------------------- s panTro5.chr4 192960869 23 + 194502333 GAGTAGAGGAGTAAAATAACGAT-------------------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843385 23 + 195804263 GAGTAGAGGAGTAAAATAACGAT-------------------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876600 23 + 4876863 GAGTAGAGGAGTAAAATAACGAT-------------------------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764504 23 + 115148730 GAGTAGAGGAGTAAAATAACGAC-------------------------------- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189664077 23 - 190850796 GACTAGCGGAGTGAAATAAGGAC-------------------------------- i calJac3.chr3 C 0 I 1 s cebCap1.NW_016107886v1 1048960 23 - 2196201 GAGCAGGGGAGTGAAACGACCAC-------------------------------- i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3435165 22 - 5030052 -GATAGAGGAGTGAAATAACGAC-------------------------------- i aotNan1.NW_018492112v1 C 0 I 1 s mm10.chr8 86650322 23 - 129401213 GAAAATAGAGGTAAAAAAAGAAA-------------------------------- i mm10.chr8 I 2 I 7 s canFam3.chr16 16997281 55 - 59632846 GGATAGAGGAGTAAaataataataataaataataataatagtaataataataaCT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e saiBol1.JH378165 13157315 8 - 14256875 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e macFas5.chr5 187990204 50 + 189454096 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=934361.000000 s hg38.chr4_KI270789v1_alt 175984 320 + 205944 TTCATCCTCTGAATGCTGCCCAGAGTCAATCCCACTGTACCCCGTGCAGAGAAAGTGACTCCAGGAGTGTGTGCCCAGTCTAGAAGAAACAACAACACTCCTTCCATGTAGAGCCAAAATCGTGTGTGTCCCTCGGCCTGAGGAGCTGGAAGAATC-CTG-AATCTTCTCCATTTAGGGC------AGGAGTTTTAGTGGCATGTCAAATGTGCAACATCCTCCAAGCCTAG-AACCTAGAGGTGGTTCTAGA----ACACTTTTCTTCCTTGCTTCCACATCTGTCCAATTACCCACCTCAATTAATA--GTTACCAGAATATTCCCAGAGAAT s panTro5.chr4 192960892 319 + 194502333 TTCATCCTCTGAATGCTGCCCAGAGTCAATCCCACTGTACCCCGTGCAGAGAAAGTGACTCCAGGAGTGTGTGCCCAGTCTAGAAGAAACAACAACACTCCTTCCATGTAGAGCCAAAATCGCGTGTGTCCCTCGGC-TGAGGAGCTGGAAGAATC-CTG-AATCTTCTCCATTTAGGGC------AGGAGTTTTAGTGGCACGTCAAATGTGCAACATCCTCCAAGCCTAG-AACCTAGAGGTGGTTCTAGA----ACACTTTTCTTCCTTGCTTCCACATCTTTCCAATTACCCACCTCAATTAATA--GTTACCAGAATATTCCCAGAGAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843408 319 + 195804263 TTCATCCTCTGAATGCTGCCCAGAGTCAATCCCACTGTACCCCGTGCAGAGAAAGTGACTCCAGGAGTGTGTGCCCAGTCTAGAAGAAACAACAACACTCCTTCCATGTAGAGCCAAAATCGCGTGTGTCCCTCGGC-TGAGGAGCTGGAAGAATC-CTG-AATCTTCTCCATTTAGGGC------AGGAGTTTTAGTGGCACGTCAAATGTGCAACATCCTCCAAGCCTAG-AACCTAGAGGTGGTTCTAGA----ACACTTTTCTTTCTTGCTTCCACATCTTTCCAATTACCCACCTCAATTAATA--GTTACCAGAATATTCCCAGAGAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876623 320 + 4876863 TTCATCCTCTGAATGCTGCCCAGAGTCAATCCCACTGTACCCCGTGCAGAGAAAGTGACTCCAGGAGTGTGTGCCCAGTCTAGAAGAAACAACAACACTCCTTCCATGTAGAGCCAAAATCGCGTGTGTCACTCGGCCTGAGGAGCTGGAGGAATC-CTG-AATCTTCTCCATTTAGGGC------AGGAGTTTTAGTGGCACGTCAAATGTGCAACATCCTCCAAGCCTAG-AACCTAGAGGTGGTTCTAGA----ACACTTTTCTTCCTTGCTTCCACATCTGTCCAATTACCCATCTCAATGAATA--GTTACCAGACTATTCCCAGAGAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764527 320 + 115148730 TTCATCCTCTGAATGCTGCTCAGAGTCAATCCCACTGTACCCCGTGCAGAGAAGGTGACTCCAGGAGTGTGTGCCCAGTCTAGAAGAAACAACAACACTCCTTCCACGTAGAGCCAAAATCGCGTTTGTCCCTCGGCCTGAGGAGCTGGAAGAATC-CTG-AATCTTCTCCATTTAGGGC------AGGAGTTTTAGTGGCACATCAAGTGTGCGACATCATCCAAGCCTAG-AACCTAGAGCTGGTTCTAGA----ACAGTTTTCTTCCTTGCTTCCACATCTGTCCAATTACCCACCTCAATTAATA--GTTACCAGAATATTCCCAGAGAAT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189664101 300 - 190850796 TTCATCTTCTGAGTGTTGCCCAGACCCAATCTCACTGTATCCCGTGCGGAGAAAGTGACTCCGGCA--GTGTGCCCAGTGTAGAAGACAGAACAACACTCTTTCCA----------------TGTTTGTCCCTCGACCTGGAGAGCTGGAAGAATC-CTG-AATCTTCTTCATTTAGGAA------GGGAGTTTCAGAAGCACATCAAATATACAGCATCTTCCAAGCCTAG-AACCGGGAGGTGCTTCTAGA----ACACTTTCCTTCCTTGCTTCCGCAGCTGTCCATTTACCCACCTCAGTTAGTA--GTTAC--AAATATTCCCAGAGAAT i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13157323 313 - 14256875 TTCCTCTTCTGAATGCTGCCCAGACCCAGTCTCATCGTAGCCCGTGCAGAGAAAGTGACTCCAGCC--GTGTGCCCAGTGTAGAAGGAAGAACAACACTCTTTCCATGTAGCGCCCATGTCGTGTTTGTCCCTCGGCCCGAAGAGCTGGAAGAATC-CTG-AATCTTCTTCATTTAGGAA------GGGAGTTTCAGCAGCACATCAAATATACAGCATCTTCCAAGCCTAG-AACCTAGAGGTGCTTCTAGA----ACACTTTTCTCTCTTGCTTCCGCAGCTGTCCAATT-CCTACTTC----AGTA--GTTACCAGAATATTCCCAGAGAAT i saiBol1.JH378165 I 8 C 0 s cebCap1.NW_016107886v1 1048984 316 - 2196201 CTCCTCTTCTGAATGTTGCCCAGACCCGATCTCACTGTGCCCCATGCAGAGAAAGTGACGCCAGCA--GTGTGCCCAGTGTAGAAGGAAGAGCAACACTCTTTCCAGGTAGCGCCCACGTCGTGTTTGTCCCTCGGCCTGAAGAGCTGGAAGAATC-CTG-AATCTTCTTCATTTAGGAA-------GGAGTTTCAGTGGCACATCAGATATACAGCATCTCCCAAGCCTAG-AACCTAGAGGGGCTTCTAGA----ACACTTTTCTTCCTGGCTTCCACAGCTGTCCAAGT-CCCACCTTAGTTAGTA--GTTACCAGAATATTCCCAGAGAAT i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3435188 314 - 5030052 TTCATCTTTTGAATGTTGCCCAGCCCCAATCTCACTGTATCCCATGCAAGGAAAGTGACTCCAGCA--GTGTGCCCAGTGTAGAA---AGAACAACACTCTTTCCATGTAGCGCCCACATTGTGTTTGTCCCTCGGCCTGAAGAGCTGGAAGAATC-CTG-ACCCTTCTTCATTTAGGAA------GGGAGTGTCAGCGGCACATCAAATATACAGCATCTTCCAAGCCTAG-AACCTAGAGGTGCTTCTAGA----ACACTTTTCTTCCTTGCTTCCACAGCTGTCCAATT-CCCACCTCAGTTAGTA--GTTACCAGAATATTCCCAGAGAAG i aotNan1.NW_018492112v1 I 1 C 0 s mm10.chr8 86650352 290 - 129401213 GTCATCTTTTTATT-------AGGTTCACCACCACTA----CTCAGTAGACAAATTAACT-TAGGA-----TACCTTATTTTTAAG----ATCAGTGCTTCGTGTGGGCAGTTTCATGATCTTGATCTACATGTGGCATGGAAAACT----GAATCACTG-AGTCCATTTCACTTGCTAA------GATGGTTATAGTCACAAATCTAACATGCTGCATACATCAAGCCTGGAAACCCATAGGTTG-TCTAAACGTCATCTATGTATTCGTAGTATGCAGCGTCGT-------CACACTTCCAGCACT---GTTTCCTGAGTATTTCT-GAGAA- i mm10.chr8 I 7 C 0 s canFam3.chr16 16997336 322 - 59632846 CTCATCTCCTAAGCTTTGCTTAGAGCCAGTCCTGATATATTCTGTGTGGGAAAAGTA----TAGGA--ATGTGTCCAGCATGTAACTAAGGTCAATACTCCCTCTGTGTGGTACCATGATCTTGCCTGGCCCATGGCCTAAACAATTGGATGAATC-CTGAAATCTGCTCTACTTAGGGAAAAAAAAAAAATTGTAGTGGCACATCAAATGTTCA-CATCTTCACAGCCTGG-AACCTTAAGGTGGTTCTAGA----ACACTTTTCTTCTCTGCTTGTGAATTGGCTCAGTTATCTAGTTCTATTAGTACTGATATCAGAATATATTCAGAGAAT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e macFas5.chr5 187990204 50 + 189454096 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=15323.000000 s hg38.chr4_KI270789v1_alt 176304 5 + 205944 CATAC s panTro5.chr4 192961211 5 + 194502333 CATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843727 5 + 195804263 CATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876943 5 + 4876863 CATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764847 5 + 115148730 CATAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187990254 5 + 189454096 CATGA i macFas5.chr5 I 50 C 0 s calJac3.chr3 189664401 5 - 190850796 CACAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157636 5 - 14256875 CATAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049300 5 - 2196201 CATAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435502 5 - 5030052 CATAG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650642 4 - 129401213 -AAGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16997658 5 - 59632846 CAGAT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e colAng1.NW_012116221v1 932071 72 + 2368649 I e manLeu1.NW_012102221v1 2828447 72 - 2847728 I e chlSab2.chr7 134368003 73 + 135778131 I e cerAty1.NW_012001672v1 3411036 72 + 4669795 I e macNem1.NW_012013133v1 24381511 72 - 25927173 I e rheMac8.chr5 189047299 72 + 190429646 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=4640.000000 s hg38.chr4_KI270789v1_alt 176309 1 + 205944 -C s panTro5.chr4 192961216 1 + 194502333 -C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843732 1 + 195804263 -C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876948 1 + 4876863 -C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764852 1 + 115148730 -C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047371 1 + 190429646 -C i rheMac8.chr5 I 72 C 0 s macFas5.chr5 187990259 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381583 1 - 25927173 -C i macNem1.NW_012013133v1 I 72 C 0 s cerAty1.NW_012001672v1 3411108 1 + 4669795 -C i cerAty1.NW_012001672v1 I 72 C 0 s manLeu1.NW_012102221v1 2828519 1 - 2847728 -C i manLeu1.NW_012102221v1 I 72 C 0 s colAng1.NW_012116221v1 932143 1 + 2368649 -C i colAng1.NW_012116221v1 I 72 C 0 s calJac3.chr3 189664406 1 - 190850796 -C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157641 1 - 14256875 -C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049305 1 - 2196201 -C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435507 1 - 5030052 -C i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650646 1 - 129401213 -C i mm10.chr8 C 0 C 0 s canFam3.chr16 16997663 1 - 59632846 A- i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e chlSab2.chr7 134368003 73 + 135778131 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=1083605.000000 s hg38.chr4_KI270789v1_alt 176310 118 + 205944 AGCACACTCTTTGCACCAGGAAGGGGTACAGATATGTTACAAGAAGAGAGGT-------------------------------------------GGCTGTCAGAGTGGACCACA---TGTCTTTTTATAGTTTGGTGCTTTGTCTTTCACAATACCAGCTTGC s panTro5.chr4 192961217 118 + 194502333 AGCACACTCTTTGCACCAGGAAGGGGTACAGATATGTTACAAGAAGAGAGGT-------------------------------------------GGCTGTCAGAGTGGACCACA---TGTCTTTTTATAGTTTGATGCTTTGTCTTTCACAATACCAGCTTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843733 118 + 195804263 AGCACACTCTTTGCACCAGGAAGGGGTACAGATATGTTACAAGAAGAGAGGT-------------------------------------------GGCTGTCAGAGTGGACCACA---TGTCTTTTTATAGTTTGATGCTTTGTCTTTCACAATACCAGCTTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3876949 118 + 4876863 AGCACACTCTTTGCACCAGGAAGGGGTACAGATATGTTACAAGAAGAGAGGT-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCTTTTTATAGTTTGGTGCTTTGTCTTTCACAATACCAGCTTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764853 118 + 115148730 AGCACAGTCTTTGCACCAGCAAGGGGTACAAATATGTTACAAGAAGAGAGGT-------------------------------------------GGCTGTCAGAGTGGACCACG---TGTCTTTTTATAGTTTGGTGCTTTGTCTTTCACAATACCAGCTTGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047372 118 + 190429646 AGCACACACTCTGCACCAGGAAGGGATACAAATATGGTACAAGAAGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCGTTTTATGGTTTGGTGCTTTGTCTTTCAGGATACCAGCTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990260 118 + 189454096 AGCACACACTCTGCACCAGGAAGGGATACAAATATGGTACAAGAAGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCGTTTTATGGTTTGGTGCTTTGTCTTTCACGATACCAGCTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381584 118 - 25927173 AGCACACACTCTGCACCAGGAAGGGATACAAATATGGTACAAGAAGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCGTTTTATGGTTTGGTGCTTTGTCTTTCACGATACCAGCTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411109 118 + 4669795 AGCACACACTCTGCACCAGGAAGGGGTACGAATATGGTACAAGAGGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACG---TGTCGTTTTATGGTTTAGTGCTTTGTCTTTCACGATACCAGCTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368076 118 + 135778131 AGCACACACTCTGCACCAGGAAGGGGTACAAATAAGTTACAAGAAGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCGTTTTATGGTTTGGTGCTTTGTCTTTCACGATACCAGCTTGC i chlSab2.chr7 I 73 C 0 s manLeu1.NW_012102221v1 2828520 118 - 2847728 AGCACACACTCTGCACCAGGAAGGGGTACAAATATGGTACAAGAGGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCGTTTTATGGTTTGGTGCTTTGTCTTTCACGATACCAGCTTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932144 118 + 2368649 AGCACACACTTTGCACCAGGAAGGGGTACAAATATGTTACAAGAAGAGAGGA-------------------------------------------AGCTGTCAGAGTGGACCACA---TGTCATTTTATAGTTTGGTGCTTTGTCTTTCACGATACCGGCTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664407 116 - 190850796 AGCACACACTTTGCACCAGGAAGGGCTGCAAATATGTTACAAGAAGAGAGCT-------------------------------------------GGCTGTGAGGCTGGCCCAC-----GTCTTCTTTCAGTTTGGTGCTTTGTCCGTCACAAAACCAACCTGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157642 118 - 14256875 AGCACACACTTTGCACCAGGAAGTGGGGCAAAGATGTTACATGAAGACAGGT-------------------------------------------GGCTGTCAGGCTGGCCCACA---TGCCTTTTTTCAGTTTGGTGCTTTGTCCCTCACAAAATCAACCTGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049306 101 - 2196201 GGCACACACTTTGCACCAGGAAGGGGTGCAAATACGTTACAAGAAGAGAGGT-------------------------------------------GGCTAT-------------------CTTTTTTTTAGTTTGGTGCTTTGTCCC-CACAAAACCAACCTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435508 116 - 5030052 AGCACACACTTTGCACCAGGAAGGGGTGCAAATATGTTACAAGAAGAGAGGT-------------------------------------------GGCTGTCAGGCTGGCCCAC-----GCCTTCTTTTAGTGTGGTGCTTTGTCCCTCACAAAACCAACCTGC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650647 161 - 129401213 AGCATCTATTCTCCACCAAGGCAGG---TAAATGTAGTaaaacaaaacaaaacgaaacaaaacaaaacaaaacaaaacaaacaaacaaaaAAACGGGCTTTCAGGGCAGGCTATGAGCAGTGTTTGTACTGTCTGCCACTTTGTCTCTCAGAACACACACTTGT i mm10.chr8 C 0 C 0 s canFam3.chr16 16997664 137 - 59632846 AGGATTGATCTTCCACCAGAAAGGTAAGTCACTGTAATGCaaaaagaaaaaa-----------------aaaaaaaaaaaaCAGATAC-------AGCTGTCAGAGTGGAACACA---TGTCTTTTTCTAGCTGGACATGTAGTCTCTCACAGCACAACCTTGC i canFam3.chr16 C 0 I 198 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=149139.000000 s hg38.chr4_KI270789v1_alt 176428 15 + 205944 CGTCTAGCAGGGGAT s panTro5.chr4 192961335 15 + 194502333 CGTCTAGCAGGGGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843851 15 + 195804263 CGTCTAGCAGGGGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877067 15 + 4876863 TGTCTAGCAGGGGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764971 15 + 115148730 CGTCTAGCAGGGGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047490 15 + 190429646 AGTCTAGCAGGGGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990378 15 + 189454096 AGTCTAGCAGGGGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381702 15 - 25927173 AGTCTAGCAGGGGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411227 15 + 4669795 AGTCTAGCAGGGGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368194 15 + 135778131 AGTCTAGCAGGGGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828638 15 - 2847728 AGTCTAGCAGGGGAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932262 15 + 2368649 AGTCTAGCAGGGGAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664523 15 - 190850796 AGTCTAGAAGGGCAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157760 15 - 14256875 AGTCTAGCAGGGGGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049407 14 - 2196201 AGTCTAGCAGGG-GT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435624 15 - 5030052 ACTCTAGCAGGGGGT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86650808 15 - 129401213 GATCTAACAGGAGAT i mm10.chr8 C 0 I 591 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16997801 198 - 59632846 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=32027.000000 s hg38.chr4_KI270789v1_alt 176443 4 + 205944 GT-CT s panTro5.chr4 192961350 4 + 194502333 GT-CT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843866 4 + 195804263 GT-CT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877082 4 + 4876863 GT-CT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764986 4 + 115148730 GT-CT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047505 4 + 190429646 AT-CT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990393 4 + 189454096 AT-CT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381717 4 - 25927173 AT-CT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411242 4 + 4669795 AT-CT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368209 4 + 135778131 AT-CT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828653 4 - 2847728 AT-CT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932277 4 + 2368649 AT-CT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664538 5 - 190850796 ATCCC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157775 4 - 14256875 AT-CT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049421 4 - 2196201 AT-CT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435639 4 - 5030052 AC-CT i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86651414 4 - 129401213 GT-CT i mm10.chr8 I 591 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16997801 198 - 59632846 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=1252421.000000 s hg38.chr4_KI270789v1_alt 176447 155 + 205944 --------------------------AGCGTC-TCCTACAAACATACTGATTATCTAGGAACATCAT-AGCACC----AAAGAGGCCTTCTGCCCTCTTC--CATTCCCACA----TTGTTAAGAAA----AAAAAAAA------CTGGTTACGTAAATTACA-----GCATATTCATTTAATACT-TG------GAATATAAAAAGGGGTGGAA s panTro5.chr4 192961354 158 + 194502333 --------------------------AGCGTC-TCCTACAAACATACTGATTATCTAGGAACATCAT-AGCACC----AAAGAGGCCTTCTGCCCTCTTC--CGTTCCCACA----TTGTTAAGAAA----AAAAAAAA-A--AACTGGTTACGTAAATTACA-----GCATATTCATTTACTACT-TG------GAATATAAAAAGGGGTGGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192843870 155 + 195804263 --------------------------AGCGTC-TCCTACAAACATACTGATTATCTAGGAACATCAT-AGCACC----AAAGAGGCCTTCTGCCCTCTTC--CGTTCCCACA----TTGTTAAGAAA----AAAAAAAA------CTGGTTACGTAAATTACA-----GCATATTCATTTACTACT-TG------GAATATAAAAAGGGGTGGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877086 159 + 4876863 --------------------------AGCGTC-TCCTACAAACATACTGATTATCTAGGAGCATCAT-AGCACC----AAAGAGGCCTTCTGCCCTCTTC--CATTCCCACA----TTGTTAAGAAA----AAAAAAAAAA--AACTGGTTACGTAAATTACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGTGAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112764990 166 + 115148730 --------------------------AGCGTC-TCCTACAAACGTACTGATTATCCAGGAGCATCAT-AGCACC----AAAGAGGCCTTCTGCCCTCTTC--CGTT-CCACA----TTGTTAAGAAA----AAAAAAAAAAACAACTGGTTACATAAATTATA-----GCATATTCATTTCCTACT-TGGAATATGAATATAAAAAGGGATGAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047509 150 + 190429646 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAC-AGCACC----AAAGAGGCC-TCTGCCGGCTTC--CGTACCCACA----CTGGGAAGAAA----AAAT----------CTGGTTGCATAAATCACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGCCAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990397 150 + 189454096 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAC-AGCACC----AAAGAGGCC-TCTGCCGGCTTC--CGTACCCACA----CTGGGAAGAAA----AAAT----------CTGGTTGCATAAATCACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGCCAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381721 150 - 25927173 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAT-AGCACC----AAAGAGGCC-TCTGCCGGCTTC--CGTACCCACA----CTGGGAAGAAA----AAAT----------CTGGTTGCATAAATCACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGCCAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411246 150 + 4669795 --------------------------AGTGTC-TCCTACAAACGTACTGACCATCTGGGAGCATCAT-AGCACC----AAAGAGGCC-TCTGCCCGCTTC--CATACCCACA----CTGTTAAGAAA----AACT----------CTGGTTGCATAACTTACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGCCAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368213 150 + 135778131 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAT-AGCACC----AAAGAGGCC-TCTGCCCGCTTC--CGTACCCACA----CTGTTAAGAAA----AAAT----------CTGGTTGCATAAATTACA-----GCATATTCATTTCCTACT-TG------GAACATAAAAAGGGGCCAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828657 150 - 2847728 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAT-AGCACC----AAAGAGGCC-TCTGCCCGCTTC--CGTACCCACA----CTGTTAAGAAA----AAAT----------CTGGTTGCATAAATTACA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGGCCAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932281 151 + 2368649 --------------------------AGTGTC-TCCTACAAACGTACTGACTATCTGGGAGCATCAT-AGCACC----AAAGAGGCCTTCTGCCCGCTTC--TGTACCCACA----TTGTTAAGAAA----AAAT----------CTGGTTGCATAAATTACA-----GCATATTCATTTCCTACT-TG------GAATACAAAAGGGGACAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664543 153 - 190850796 --------------------------AGTGTC-TCCTACAGACGTACTGAGTATCGGGGAGCATCGT-AGTAAC----AAAGAGACCTTCTTCCCGCTCC--GGTCCCTACA----TTGTTAAGAAA----AAAAA--------CTTGGTCATATAAGTTATA-----GCACATTCATTTCCTACT-TG------GAGTATAAGAAGGGGTGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157779 150 - 14256875 --------------------------AGCCTC-TCCTACACACATACTGAGCATCTGGGAGCATCAT-AGTACC----AAAGAGAC---CTTCCCCCTTT--AGTCCCTACA----TTGTTAAGAAA----AAAAA-------GCTTGGTCATTTAAGTTACA-----GCATACTCATTTCCTAC--TG------GAATATAAAAAGGGCTGAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049425 156 - 2196201 --------------------------AGCGTC-TCCTACAGACGTACTGAGGATCTGGGAGCATCGT-AGCACC----AAAGAGACCTTCTTCCCCCTTC--GGTCCCTGCT----TTGTTGAGAAA----AAAAAAA-----ACTTGGTCATATAAGTTATA-----GCATATTCCTTTCCTACT-TG------AAATATGAAAAGGGCTGAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3435643 151 - 5030052 --------------------------AGCGTC-TCCTACAGACGAACTGAGTATCTGGGAGCATCGT-AGCACC----AAAGAGACCTTCTTCCCCCTTC--GGTCCCTACA----TTGTTAAAAAA----AAA----------CTTGGTCACATAAGTTATA-----GCATATTCATTTCCTACT-TG------GAATATAAAAAGGGATGAAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86651418 160 - 129401213 --------------------------AAGATCTTTCTATGAAAATGCATGTTTTCCAGGAACATCATAAATAAT----AACTAAACT-TCTGTATTCTCT--TATCCTCATA----CAGTTTATCAC----AGGAAAA-------CTATAAATGTATATTACACATTTACAATTTTATATAATACA-TA------ATACGTTTAAAGTGTAGGAA i mm10.chr8 C 0 I 528 s canFam3.chr16 16997999 191 - 59632846 AGCACCTCCTAGACACTAGACACTAAGGTGTC-TTACAGAAAAATGCACATATTTTGGAAGTGGCAT-AGTACCAACAAAAGATGTTTTTGTCGTTCTTCCTCATTCCTACATTGTTTGTTAAGAAAGGTGAAAAAACA------CTGG-----TAAATTATA-----GCACATGCATAGCACACCATG------GAATATAAACAAGGATGAAA i canFam3.chr16 I 198 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=701086.000000 s hg38.chr4_KI270789v1_alt 176602 69 + 205944 ACATTGTTAAGGCCCCTGTCTGTGTAAGGATATAGAAAGCA-GCCAAGATATATCTGTAGGTAACTAAAA s panTro5.chr4 192961512 69 + 194502333 ACATTGTTAAGGCCCCTGTCTGTGTAAGGATATAGAAAGCA-GCCAAGATATATCTGTAGGTAACTAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844025 69 + 195804263 ACATTGTTAAGGCCCCTGTCTGTGTAAGGATATAGAAAGCA-GCCAAGATATATCTGTAGGTAACTAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877245 69 + 4876863 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCA-GCCAAGATATATTTGTAGGTAACTAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765156 69 + 115148730 ACATTGTTAAGGCCCCTCTCTTTGTAAGGATATAGAAAGCA-GCTGAGATGTATTTGTGGGTAACTAAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047659 70 + 190429646 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990547 70 + 189454096 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381871 70 - 25927173 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411396 70 + 4669795 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368363 70 + 135778131 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATACAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828807 70 - 2847728 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACTAAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932432 70 + 2368649 ACATTGTTAAGGCCCCTCTCTGTGTAAGGATATAGAAAGCAGGCCAAGATATATTTGCAGGTAACCAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664696 70 - 190850796 ACGTTGCTAAGGCAGCTCTCTGCATGAGGATATGGGAAGCAGGCCAAGGTATATTTGCAGGTAACTGAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157929 70 - 14256875 ACGTTGCTAAGGCAGCCCTCTGTGTGAGGATATGGGAAGCAGGCAAAGATATATTTGTGGGTAACTGAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049581 70 - 2196201 ACGTTGCTAAGGCAGTTCTCTGCGTGAGGGTATGGGAAGCAGGCCAAGATATATTTGTGGGTAACTGAAA i cebCap1.NW_016107886v1 C 0 I 19 s aotNan1.NW_018492112v1 3435794 70 - 5030052 ATGTTGCTAAGGCAGCTCTCTGAGTGAGGCTATGGGAAGCAGGCCAAGATATATTTGTAGGTAACTGAAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16998190 70 - 59632846 ACATTCTTGAGGGAGCTCTCTGTGTGAGGATATAGAGAGCCTGCCAAGATGTCATTTTAGGTAACCAAAG i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=12783.000000 s hg38.chr4_KI270789v1_alt 176671 5 + 205944 TGCA-G s panTro5.chr4 192961581 5 + 194502333 TGCA-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844094 5 + 195804263 TGCA-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877314 5 + 4876863 TGTA-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765225 5 + 115148730 TGCA-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047729 5 + 190429646 TGCA-G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990617 5 + 189454096 TGCA-G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381941 5 - 25927173 TGCA-G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411466 5 + 4669795 TGCA-G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368433 5 + 135778131 TGCA-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828877 5 - 2847728 TGCA-G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932502 5 + 2368649 TGTA-G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664766 4 - 190850796 GGCA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13157999 4 - 14256875 GGCA-- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3435864 5 - 5030052 GGCAG- i aotNan1.NW_018492112v1 C 0 I 14 s canFam3.chr16 16998260 5 - 59632846 TATA-T i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=168626.000000 s hg38.chr4_KI270789v1_alt 176676 28 + 205944 ATGTGCACAATGCTGCCATGCCTGTAGA s panTro5.chr4 192961586 28 + 194502333 ATGTGCACAATGCTGCCATGCCTGTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844099 28 + 195804263 ATGTGCACAATGCTGCCATGCCTGTAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877319 28 + 4876863 ATGTGCACAATGCTGCCATTCCTGTAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765230 28 + 115148730 ATGTGCACAATGCTGCCATGCCTGTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047734 28 + 190429646 ACGTGCACAATGCTGCTATGCCTGTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990622 28 + 189454096 ACGTGCACAATGCTGCTATGCCCGTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381946 28 - 25927173 ACGTGCACAATGCTGCTATGCCCGTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411471 28 + 4669795 ACGTGCACAATGCTGCTATGCCCATAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368438 28 + 135778131 ATGTGCACAATGCTGTTATGCCCGTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828882 28 - 2847728 ACGTGCACAATGCTGCTATGCCCGTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 932507 24 + 2368649 ATATGCACAATGCTGCCATGCCCG---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664770 14 - 190850796 --------------GCCAGGCCTGTAAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158003 14 - 14256875 --------------GCCATGCCTGTGAG i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16998265 28 - 59632846 GTGCAAACAATGTTGCCATGTCTGTACA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e otoGar3.GL873580 11283944 6 - 11315646 I a score=7098.000000 s hg38.chr4_KI270789v1_alt 176704 1 + 205944 A s panTro5.chr4 192961614 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844127 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877347 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765258 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047762 1 + 190429646 A i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990650 1 + 189454096 A i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381974 1 - 25927173 A i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411499 1 + 4669795 A i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368466 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828910 1 - 2847728 A i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189664784 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158017 1 - 14256875 A i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e colAng1.NW_012116221v1 932531 0 + 2368649 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=120277.000000 s hg38.chr4_KI270789v1_alt 176705 25 + 205944 AACAAggccgggtgcggtggctcac s panTro5.chr4 192961615 25 + 194502333 AACAAggctgggcgcggtggctcat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844128 25 + 195804263 AACAAggccgggcgcggtggctcat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877348 25 + 4876863 AACAAggccaggcgtggtggctcac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765259 25 + 115148730 AACAAggccgggcgtggtggctcac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047763 25 + 190429646 AACAAggccaggtgcggtggctcac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990651 25 + 189454096 AACAAggccaggtgcggtggctcac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24381975 25 - 25927173 AACAAggccaggtgcggtggctcac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411500 25 + 4669795 AACAAggccaggtgcggtggctcac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368467 25 + 135778131 AACAAGGCCAGGTGCGGTGGCTCAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828911 25 - 2847728 AACAAggccaggtgcggtggctcac i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=111487.000000 s hg38.chr4_KI270789v1_alt 176730 36 + 205944 gcctgtaatcccagtgcctgtagaaaa-------------------------------------------------caaggccgg s panTro5.chr4 192961640 36 + 194502333 gcctgtaatcccagtgcctgtagaaaa-------------------------------------------------caaggccgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844153 85 + 195804263 gcctgtaatcccagtgcctgtagaaacaaggccgggcgcggtggctcacgcctgtaatcccagtgcctataaaaatcaaggccgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877373 35 + 4876863 acctgtaatcccagtgcctataaaaa--------------------------------------------------caaggccgg i gorGor5.CYUI01015356v1 C 0 I 101 s nomLeu3.chr7b 112765284 36 + 115148730 gcctgtaatcccagtgcctgtagaaaa-------------------------------------------------caaggccgg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047788 36 + 190429646 gcctgtaatcccagTGCCTGTGAAAAA-------------------------------------------------CAAGTccgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990676 36 + 189454096 gcctgtaatcccagTGCCTGTGAAAAA-------------------------------------------------CAAGTccgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382000 36 - 25927173 gcctgtaatcccagTGCCTGTGAAAAA-------------------------------------------------CAAGTccgg i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134368492 35 + 135778131 ACCTGCAATCCCAGTGCCTGT-AGAAA-------------------------------------------------CAAGTccgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828936 36 - 2847728 gcctgtaatcccagTGCCTGTGAAAAA-------------------------------------------------CAAGTccgg i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=19216.000000 s hg38.chr4_KI270789v1_alt 176766 5 + 205944 gcgcg s panTro5.chr4 192961676 5 + 194502333 gcgcg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844238 5 + 195804263 gcgcg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877509 5 + 4876863 gcgcg i gorGor5.CYUI01015356v1 I 101 C 0 s nomLeu3.chr7b 112765320 5 + 115148730 gcgtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047824 5 + 190429646 gcgcg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990712 5 + 189454096 gtgcg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382036 5 - 25927173 gtgcg i macNem1.NW_012013133v1 C 0 C 0 s chlSab2.chr7 134368527 5 + 135778131 gcgcg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828972 5 - 2847728 gcgcg i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=24552.000000 s hg38.chr4_KI270789v1_alt 176771 7 + 205944 gtggctc s panTro5.chr4 192961681 7 + 194502333 gtggctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844243 7 + 195804263 gtggctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877514 7 + 4876863 gtggctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765325 7 + 115148730 gtggctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047829 7 + 190429646 gtggctc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990717 7 + 189454096 gtggctc i macFas5.chr5 C 0 C 0 s chlSab2.chr7 134368532 7 + 135778131 gtggctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828977 7 - 2847728 gtggctc i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=4431.000000 s hg38.chr4_KI270789v1_alt 176778 2 + 205944 ac s panTro5.chr4 192961688 2 + 194502333 ac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844250 2 + 195804263 ac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877521 2 + 4876863 ac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765332 2 + 115148730 ac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047836 2 + 190429646 ac i rheMac8.chr5 C 0 C 0 s chlSab2.chr7 134368539 2 + 135778131 ac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2828984 2 - 2847728 at i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=1314.000000 s hg38.chr4_KI270789v1_alt 176780 1 + 205944 g s panTro5.chr4 192961690 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844252 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877523 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765334 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047838 1 + 190429646 a i rheMac8.chr5 C 0 C 0 s manLeu1.NW_012102221v1 2828986 1 - 2847728 g i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=4795.000000 s hg38.chr4_KI270789v1_alt 176781 4 + 205944 cctg s panTro5.chr4 192961691 4 + 194502333 cctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844253 4 + 195804263 cctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877524 4 + 4876863 catg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765335 4 + 115148730 cctg i nomLeu3.chr7b C 0 I 550 s manLeu1.NW_012102221v1 2828987 4 - 2847728 cctg i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=12215.000000 s hg38.chr4_KI270789v1_alt 176785 9 + 205944 taatcccag s panTro5.chr4 192961695 9 + 194502333 taatcccag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844257 9 + 195804263 taatcccag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877528 9 + 4876863 taatcccag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765889 9 + 115148730 taatcccag i nomLeu3.chr7b I 550 C 0 s manLeu1.NW_012102221v1 2828991 9 - 2847728 caatcccag i manLeu1.NW_012102221v1 C 0 I 6778 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e colAng1.NW_012116221v1 932531 0 + 2368649 C e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=386176.000000 s hg38.chr4_KI270789v1_alt 176794 306 + 205944 TGCCTATAAAAAACAAggccagacgcggtggctcacgcctgtaatcccagcactttgggaggccgagatgggcagatcacagggtcaggggatggagaacatcttggccaacatggtgaaatccc--gtgtctgctaaaaatacagaaattagctgggcgtgcctgtagttctagctacttgggaggctgaggcaggagaacctcttgaacctgggaggcagaggttatagtacgctgagatggcactattgcacactccagcctgggcaacagagcaagactccatctcaggg-aaaaaaaaaaaCAC s panTro5.chr4 192961704 307 + 194502333 TGCCTATAAAAAACAAggccagacacggtggctcacgcctgtaatcccagcactttgggaggctgagatgggcagatcacagggtcaggggatggagaacatcttggccaacatggggaaatcct--gtgtctgctaaaaatacagaaattagctgggcgtgcctgtagttctagctacttgggaggctgaggcaggagaacctcttgaacctgggaggcagaggttatagtacgctgagatggcactattgcacactccagcctgggcaacagagcaagactccttctcgggggaaaaaaaaaaaCAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844266 306 + 195804263 TGCCTATAAAAAACAAggccagacacggtggctcacgcctgtaatcccagcactttgggaggctgagatgggcagatcacagggtcaggggatggagaacatcttggccaacatggtgaaatccc--gtgtctgctaaaaatacagaaattagctgggcgtgcctgtagttctagctacttgggaggctgaggcaggagaacctcttgaacctgggaggcagaggttatagtacgctgagatggcactattgcacactccagcctgggcaacagagcaagactccttctcgggg-gaaaaaaaaaaCAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877537 305 + 4876863 TGCCTATAAAAAACAAggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagatgggcagatcagagggtcaggagatggagaacatcttggccaacatggtgaaatccc--gtctctactaaaaatacaaaaattagctgggcgtgcctgtagttctagctacttgggaggctgaggcaggagaacctcttgaacctgggaggcagaggttatggtgagctgagatggcaccattgcacactccagcctgggcaacagagcaagactccatctcgggg--gaaaaaaaaaCAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112765898 306 + 115148730 TGCCTGTGAAAAACAAggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccgagatgggcagatcacagggtcaggagatcgagaacatcttggccaacgtggtgaaatccc--atctctactaaaaatacagaaattagttgggcatgcctgtagttccagctacttgggaggctgaggcaggagaatctcttgaacctgggaggcagaggttatagtgagctgagatggcaccattgcacactccagcctgggcaacagagcaagactccatctcgaga-aaaaaagaaaaCAC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 932531 302 + 2368649 ------TAAAAAACAAggccaggcgcggtggctcacgcctgcaatcccagcactttgggaggccgaggtgggcggatcacagggccaggcgatagagaagatcttggccaacatgttgaaatcccctgtctctactaaaaatacaaaaactagctgggcgtgcctgtagttctagctacttgggaggctgaggcagaagaatctcttgaacctggaaggcagaggttatagtgagctgagatggcaccattgcacactccagcctgggcaacagagcaagactccatctctgaa-aaacacacacacac i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189664785 0 - 190850796 C e cebCap1.NW_016107886v1 1049651 19 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998293 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3435869 14 - 5030052 I e saiBol1.JH378165 13158018 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=576446.000000 s hg38.chr4_KI270789v1_alt 177100 172 + 205944 A------ACAAGCAAGTACACAAAAACGCC--------------AAACACACAAAACTATACAGAACATATGATTTTTGCCAATATTCCAGGGTAAAAACATCTCAAGAGTTGATAGATTCCAGAGTCTTTGAGTGAGCACACTCGGTTCCTATCCTT--GATCCCCTGCCCTCCGGAAGGCCTGTTTCTGT----CT s panTro5.chr4 192962011 172 + 194502333 A------ACAAGCAAGTACACAAAAACGCC--------------AAACACACAAAACTATACAGAACATATGATTTTTGCCAATATTCCAGGGTAAAAACATCTCAAGAGTTGATACATTCCAGAGTCTTTGAGTGAGCACACTCGGTTCCTATCCTT--GATCCCCTGCCCTCCGGAAGGCCTGTTTCTGT----CT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844572 172 + 195804263 A------ACAAGCAAGTACACAAAAACGCC--------------AAACACACAAAACTATACAGAACATATGATTTTTGCCAATATTCCAGGGTAAAAACATCTCAAGAGTTGATACATTCCAGAGTCTTTGAGTGAGCACACTCGGTTCCTATCCTT--GATCCCCTGCCCTCCGGAAGGCCTGTTTCTGT----CT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3877842 172 + 4876863 A------ACAAGCAAGTACACAAAAATGCC--------------AAACACACAAAACTATACAGAACATATGATTTTTGCTAATATTCCAGGGTAAAAACATCTCAAGAGTTGATACATTCCAGAGTCTTTGAGTGAGCACACTCGCTTCCTATCCTT--GATCCCCTGCCCTCCGGAAGGCCTGTTTCTGT----CT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766204 172 + 115148730 A------ACAAGCAAGTACACAAAAAAGCC--------------AAACACACAAAACTGCACAGAACATATGATTTTTGCTAATATTCCAGGGTAAAAACATCTCAAGAGTTGGTACATTCCAGAGTCTTTGAGTGAGCACACTCGGTTCCTATCCTT--GATCCCCTGCCCTCTGGAAGGTCTGTTTCTGC----CT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 932833 177 + 2368649 acacacCCCAAGCAAGTACGCAAAAACGCT--------------AAACACACAAAACTGTACAGAACATATGATTTTTG-TAGTATTCAAGGGTAAACACATCTCAAGAGTTGATACATTCCAGAGTCTTTGAGTGAGCACACTCGGTTCCTATCCTC--GATCCCCGGCCCTCCGAAAGGCCTGTTACTGC----CT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664785 168 - 190850796 A------ACAAGCAGGTAGGCAAAACCGCC--------------AAACACACAGGCCTGTATGGGACATAGGATTTGTGCTAATGTTCAAGGGCAAA-ACATCTCAAGAGTTGATACATTCCTGAGCCTTTGAGTGAACACACTCGGTCCCCACCCTT--GGT-CCCTGCCCTCTGGAAGGCCTGTTTCTGT------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158018 166 - 14256875 A------ACAATCAGGTACACAAAAACGCC--------------AAACACACAGGCCCGTACGGAAC--AGGATGTTTGCTAATGTTCAAGGGCAAA-GCATCTCAAGGGTTGATGCATTCCAGAGCCTTTGAGTGAACACACTCGGTTCCCACCCTT--GGT-CCCTGCCCTCTGAAAGGCCCGTTTCTGC------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049670 170 - 2196201 A------ACAAGCAGGTGCACAAAAACGCC--------------ACACACACAGGCCCGTACGGAACATAGGATGTTTGCTAATGTTCAAAGGCAAA-GCATCTCAAGGGTTGATACATTCCGGAGCCTTCGAGTGAATACACTCGGTTCCCCGCCTT--GGT-CCCTGCCCTCCGGAAGGCCCGTTCCTGTCT---- i cebCap1.NW_016107886v1 I 19 I 121 s aotNan1.NW_018492112v1 3435883 170 - 5030052 A------ACAAGCAGGTACGCAAAAACACC--------------AAACACACACGCCTGTATGGAACATAGGATTTTTGCTAATGTTCAAGGGCAAA-ACATCTCAAGAATTGATACATTCCAGAGCCTTTGAGTGAACACACTCAGTTCCCACCCTT--GGT-CCCTGCCCTCTGGAAGGCCTGTTTCTGT--CT-- i aotNan1.NW_018492112v1 I 14 I 41 s canFam3.chr16 16998293 167 - 59632846 A------ATAAGTAAGCACATGAAAACATCAACATTAATTAAAAAAACACATATAATTGTACACAGTATATGACTTTTGCCAAAGTTCAAGGGTAAT-ACAACTGAAAAGTAAATACA-----GAGTCTTTCAGTAA---------------ATCCTGAAAATCCCCTGCCTTTGAGAGTGCTTATTCCTAA----CT i canFam3.chr16 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=145936.000000 s hg38.chr4_KI270789v1_alt 177272 96 + 205944 TCTCCCTCACACTCACCACCTGCTATCAGGACTCTCTGCTCCCTACTGTCAAGACTAGACGTGCCTCAGACACAGATTCCTCCCTTCTTCAGCAGG s panTro5.chr4 192962183 96 + 194502333 TCTCCCTCACACTCACCACCTGCTATCAGGACTCTCTGCTCCCTACTGTCAAGACTAGACGTGCCTCAGACACAGATTCCTCCCTTCTTCAGCAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844744 96 + 195804263 TCTCCCTCACACTCACCACCTGCTATCAGGACTCTCTGCTCCCTACTGTCAAGACTAGACGTGCCTCAGACACAGATTCCTCCCTTCTTCAGCAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878014 96 + 4876863 TCTCCCTCACACTCGCCACCTGCTATCAGGACTCTCTGCTCCCTACTGTCAAGACTAGATGTGCCTCAGACACAGATTCCTCACTCCTTCAGCAGG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766376 96 + 115148730 TCTCCCTCACACTCGCCACCTGCTATCAGGACTCTCTGCTCCCTACTGTCAAGACTAGACGTGCCTCAGACGCAGATTCCTCACTTTTTCAGCAGG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933010 96 + 2368649 TCCCCCTCACACTTGCCAGCTGCTATCAGGACACTCTGCTCCCTACTATCAAGACAAGACTTGCCTCCGACACAGACTCCTCACTTCTTCTGCAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664953 43 - 190850796 -----------CTCTGCACCTGCTCTCAGGACT-TCTGCTCCC------------------TGCTTCAGACAC----------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158184 43 - 14256875 -----------CTCTGCACCTGCTGTCAGGACT-TCTGCTCCC------------------TGCTTCAGACAC----------------------- i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 16998460 94 - 59632846 TCTGCCTCGGAATCTCCAGCCTCAATTAGGACAATTTCCTCCTTACTAGCAAGGCTAGACTTACCCT--ATACAAATCCTTTGTGTCTTTAGGATG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1049840 121 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3436053 41 - 5030052 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=228838.000000 s hg38.chr4_KI270789v1_alt 177368 82 + 205944 AGTTCCCAGGGCCGAGTTATTTATTCTAGAA--GGTGCCCCTGGTGATAGTGGTGGGGAAAGCTTCT-ACAGGTCA-TCTGCAGTT s panTro5.chr4 192962279 82 + 194502333 AGTTCCCAGGGCCGAGTTATTTATTCTGGAA--GGTGCCCCTGGTGATAGTGGTGGGGAAAGCTTCT-ACAGGTCA-TCTGCAGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844840 82 + 195804263 AGTTCCCAGGGCCGAGTTATTTATTCTAGAA--GGTGCCCCTGGTGATAGTGGTGGGGAAAGCTTCT-ACAGGTCA-TCTGCAGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878110 82 + 4876863 AGTTCCCAGGGCTGAGTTATTTATTCTAGAA--GGTGCCCCTGGTGGTAGTGGTGGGGAAAGCTTCT-ACAGGTCA-TCTGCAGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766472 81 + 115148730 AGTTCCCAGGGCCGAGTTATTTATT-TAGAA--GGTGCCCCTGGTGGTAGTGGTGGGGAAAGCTTCT-ACAGGTCA-TCTGCAGTT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933106 82 + 2368649 AGTTCCCAGGGCCGAGTTATTTATTCTAGAA--GGCGCCCCCGGTGGTAGTGGTGGGGAGAGTTTCT-ACAGGTCA-CCTGGGGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189664996 82 - 190850796 AGTTCCCAGGGCCAAGCTATTTATTCTAGAG--GGCGCCCCTGGCGGTGGTGGCGGGGAGGGCTTCC-ACAGGGCA-TCTGTAACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158227 73 - 14256875 AGTTCCCAGCACCAAGCCATTTATTCTAGAG-----------GGCGGTGGCAGCAGGGAGGGCTTCC-ACAGGGCA-TCTGTAGTT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3436094 82 - 5030052 AGTTCCCAGGGCCAAGCTATTTATTCTAGAG--GGTGCCCCTGGCGGTGGCGGTGGGGAGGGCTTCC-ACAGGGCA-TCTGTAGTT i aotNan1.NW_018492112v1 I 41 C 0 s canFam3.chr16 16998554 85 - 59632846 CAACACTAGGTCTGTATTA-TTAGTCAAGAACAAGACCCTCTGGTGGCAGCTGTGGTGTAGGCTTCCAATAGGTCATTTTGTGGTT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1049840 121 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=229195.000000 s hg38.chr4_KI270789v1_alt 177450 75 + 205944 ACTTCTGGTCCTGTGTGTCACTCCGAAGACCACTTGTCATGT-GGGGCGGCGGCTT---------CACAGAAGCATCTAGGTTAG s panTro5.chr4 192962361 75 + 194502333 AATTCTGGTCCTGTGTGTCACTCTGAAGACCACTTGTCATGT-GGGGCGGCGGCTT---------CACAGAAGCATCTAGGTTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844922 75 + 195804263 AATTCTGGTCCTGTGTGTCACTCTGAAGACCCCTTGTCATGT-GGGGCGGCGGCTT---------CACAGAAGCATCTAGGTTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878192 75 + 4876863 ACTTCTGGTCCTGTGTGTCACTCCGAAGACCACTTGTCATGT-GGGGCGGCGGCTT---------CACAGAAGCATCTAGGTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766553 75 + 115148730 ACTTCTGCTCCTGTGTGTCACTCCAAAGACCACTTCTTATGT-GGGGAGGCGGCTT---------CAGAGAAGCATCTATGTTAG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933188 76 + 2368649 CCTTCTGGTCCTGTGCCCCACTCCAAAGACCACTTCTGATGTGGGGGAGACGGCTT---------CACAGAAGCATCCAGGCTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665078 73 - 190850796 ACTTCTGGTCCTGAGTGTCACTGGCAAGAACACTTCTGATGT-GGGGA-GCGGCTT---------CACAGACG-GTCTAGGTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158300 74 - 14256875 ACTTCTGGTCCTGAGCATCACTTGCAAGAACACTTCTGACGT-GAGGAGGCGGCTT---------CACAGAAG-GTCTGGGTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1049961 74 - 2196201 ACTTCTGGTCCTGAGTGTCACTTGCAAGAACACCTCTGACGT-GGGGAGGCAGCTT---------CACAGAAG-GTCTAGGTTAA i cebCap1.NW_016107886v1 I 121 C 0 s aotNan1.NW_018492112v1 3436176 74 - 5030052 ACTTCTGGTCCTGAGTGTCACTTGCAAGAACACTTCTGATGT-GGGGAGGCGGCTT---------CACAGAAG-GTCTAGGTTAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16998639 84 - 59632846 ATCTTGAATCCTTCATGTACCTCCAAATAAGATCAGTCATGT-GGGGAGATGGGTTTGACACTCCTAATTAAGCATTTAAGTTAG i canFam3.chr16 C 0 I 4 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=260550.000000 s hg38.chr4_KI270789v1_alt 177525 75 + 205944 CCAGAGACACTTAAAGCCTGTTTCTCTTTGAGAATGATGGTAAGCAGAAGACCTTTCTCTTTATCTTGTATTTAT s panTro5.chr4 192962436 75 + 194502333 CCAGAGACACTTAAAGCCTGTTTCTCTTTGAGAATGATGGTCAGCAGAAGACCTTTCTCTTTATGTTGTATTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192844997 75 + 195804263 CCAGAGACACTTAAAGCCTGTTTCTCTTTGAGAATGATGGTCAGCAGAAGACCTTTCTCTTTATGTTGTATTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878267 75 + 4876863 CCAGAGCCACTTAAAGCCTGTTTCTCTTTGAGAATGATGGTCAGCAGAAAACCTTTCTCTTTATCTTGTATTTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766628 75 + 115148730 CCAGAGCCACTTAAAGCCTGTTTCTCTTAGAGAATGATGGTAAGCAGAAGACCTTTCTCTTTATCTTGTATTTAT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933264 75 + 2368649 CCAGAGCCACTTAAAGCCTGTTGCTCTTTGAGAATGATGGTAAGCAGAAGACCTTTCTCTTTCTCTTGCATTTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665151 75 - 190850796 GCAGAGCCACTTACAGCCTGCTTCTATTTGAGAGTAACAGTAAGCGGATGACCTTTCTCTTTATCTTGTATTTAT i calJac3.chr3 C 0 I 276 s saiBol1.JH378165 13158374 75 - 14256875 CCAGAGCCACGTACAGCCTGTTTCTCTTTGAGAATGATGGTAAGTGGATGACCTTTCTCTTTATCTTGTATTTAT i saiBol1.JH378165 C 0 I 294 s cebCap1.NW_016107886v1 1050035 75 - 2196201 CCAGAGCCACTTACAGGCTGTTTCTCTTCAAAAATGACGGTAAGCGGATGACCTTTCTCTTTGTCTTGTATTTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3436250 75 - 5030052 GCAGAGCCACTTACAGCCTGTGTCTCTTTGAGAATGACAGTAAGCGGATGACCTTTCTCTTTATCTTGTATTTAT i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998723 4 - 59632846 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=2250.000000 s hg38.chr4_KI270789v1_alt 177600 1 + 205944 T s panTro5.chr4 192962511 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845072 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878342 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766703 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933339 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665502 1 - 190850796 T i calJac3.chr3 I 276 C 0 s saiBol1.JH378165 13158743 1 - 14256875 T i saiBol1.JH378165 I 294 C 0 s cebCap1.NW_016107886v1 1050110 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 I 294 s aotNan1.NW_018492112v1 3436325 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998723 4 - 59632846 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=926.000000 s hg38.chr4_KI270789v1_alt 177601 1 + 205944 A s panTro5.chr4 192962512 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845073 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878343 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766704 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933340 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665503 1 - 190850796 G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158744 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3436326 1 - 5030052 G i aotNan1.NW_018492112v1 C 0 I 293 e cebCap1.NW_016107886v1 1050111 294 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998723 4 - 59632846 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=1102000.000000 s hg38.chr4_KI270789v1_alt 177602 333 + 205944 GTAACTATTAAATATATATTTTTATACACACAGACATATACCAAAGATGAACATTGATCCTTATCTTACGGATTCTCTAGACTCAAATGCTTACTGAAGTCAGGCAGATAAAACA--------AAAA--AAATTCAACAACAGCAAACCAGCAAACAGAAACTCAC-TGAGGTAGTGAAGTGTAAGCAGGAAGCTGTGTGGCCAGGTGTGAGGAACTGTGTAGAACTCTGGGAGGAATgagagtagc-cccttcagcttcactgcttgctggtatgtggg-agggagggccaggg-ttccaaaacttccagttcttaaatagaagcctgcagtccTCATTGGAATTG s panTro5.chr4 192962513 332 + 194502333 GTAACTATTAAATATATATTTTTATACACACAGACATATCCCAAAGATGAACATTGATCCTTATCTTACGGATTCTCTAGACTCAAATGCTTACTGAAGTCAGGCAGATGAAACA--------AAAA--AA-TTCAACAACAGCAAACCAGCAAACAGAAACTCAC-TGAGGTAGTGAAGTGTAAGCAGGAAGCTGTGTGGCCAGGTGTGAGGAACTGTGTAGAACTCTGGGAGGAATgagagtagc-cccttcagcttcactgcttgctgctatgtggg-agggagggccagtg-ttccaaaacttccagttcttaaatagaagcctgcaatcctcattggaattg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845074 331 + 195804263 GTAACTATTAAATATATATTTTTATACACACAGACATATCCCAAAGATGAACATTGATCCTTATCTTACGGATTCTCTAGACTCAAATGCTTACTGAAGTCAGGCAGATGAAACA--------AAAA--AA-ATCAACAACAGCAAA-CAGCAAACAGAAACTCAC-TGAGGTAGTGAAGTGTAAGCAGGAAGCTGTGTggccaggtgtgaggaactgtgtagaactctgggaggaatgagagtagc-cccttcagcttcactgcttgctgctatgtggg-agggagggccagtg-ttccaaaacttccagttcttaaatagaagcctgcaatcctcattggaattg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878344 334 + 4876863 GTAACtattaaatatatatttatatacatacagacatatCCCAAAGATGAACATTGATCCTTATCTTACGGATTCTCTAGACTCAAATGCTTACTGAAGTCAGGCAGATAAAACA--------AAAA--AAATTCAACAACAGCAAACCAGCAAACAGAAACTCACTTGAGGTAGTGAAGTGTAAGCAGGAAGCTGTGTGGCCAGGTGTGAGGAACTGTGTAGAACTCTGGGAGGAATgagagtagc-cccttcagcttcactgcttgctgctatgtggg-agggagggccaggg-ttccaaaacttccacttcttaaatagaagcctgcaatcctcattggaattg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112766705 333 + 115148730 GTAACTATTAAATATATATTTTTATACATAGAGACATATCCCAAAGATGAACATTGATCCTTACCTTACGGATTCTTTAGACTCAAATGCTTACCAAAGTCAGGCAGATAAAACA--------AAAA--AAATTCAATAACAGCTAACCAGCAAACAGAAACTCAC-TGAAGTAGTGAAGTGTAAGCAGGAAGCTGTGTGGCCAGGTGTGAGGAACTGTGTAGACCTCTGGGAACAATgagagtagc-cccttcagcttcactgcttgctgctatgtggg-agggagggccaggg-ttccaaaacttccagttcttaaatagaagcctgcaatccTCATTGGAATTG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933341 341 + 2368649 GTAACTATTAAATATCTATTT-TATACATACACACACATCCCAAAGATGAACGTTGATCCTTGTCTTACGGATTCTCTATACTCAAATGCTTACTGAAGTCAGGCAGATAAaacaacaacaacaaaa--aaattcaacgacagcaaacaagcaaACAGAGACTCAC-TGAGGTAGTGAAGTGTAAGCAGGAAGCTGTGTGGCCGGGTGTGAGGAACTGTGTAGAACTCCGTGAGGCATgagagcagc-cccttcagcttcactgcttgctgctatgtggg-aaggagggccagggtttccagaacttccacttcttacatagaagcctgcaatccTCATTGGAATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665504 331 - 190850796 GTAACTATTAAATATGTATTTTTATACATACACACACATCCCAAAGATGAACACTGATCCTTATCTGACTG----TCTAGACTCAAATGCTTACTGAAGTCAGGAAGATAGAACA--------AAACCCAAAATCAACCACAGCAAAGAAGCAAacagagactcac-gcaggtagtgaagtatatgcaggaagctgtgaggctgggtgtgagggactcagtccagctccagaatgaatgagagtagctcccttcagcttcactgcttgctgctatggtgg-gggtggg--cagtgtttccagaacttccagttcttaaatagagccgtgcaatccccgttggaattt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13158745 336 - 14256875 GTAACtattaaatatatatttttataCATACACACACATCCCAAAGATGAACACTGATCCTTACCTTACTGATTCTCTAGACTCGAATGCTTACTGAAGTCAGGCAGATAAAACA--------AAAACCGAAATGAACCACAGCAAACAAGCAAACAGAAACTCAC-TGAGGTAGTGAAGTGTATGCAGGAAGCTGTGAGTCTGGGTGTGAGGAACTGTGTAGAGCTCCAGAATGAATGAGAGTAGCCTCCTTCAGCTTCGCTGCTTGCTGCTATGTGGG-GGGTGGG-CCAGGGTTTCCAGAATTTCCAGTTCTTAAATAGAGCGGTGCAATCCCCGTTGGAATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1050405 331 - 2196201 GTAACTATTAAATATATATTTTTATACGTACACACACGTCCCAAAGATGAACACTGATCCTTATCTTACTGATTCTCTAGACTCAAATGCTTATGGAAGTCAGGCAGATAAAACA--------GAAACCAAAGTCAACCACAGCAAAGAAG----CAGAGACTCAC-TGAGGTAGTGAAGTGTATGCAGGAAGCTGTGAGGCTGGGTGTGAGGAACTGTGCAGCGCCCCAGAATGAGCAAGAGTCACCCCCTTCAGCTTCACTGCTTGCTGCTATGTGGT-GGGGGGG--CAGGGTTTCCAGAACTTCCAGTTCTTAAATAGAGCCGTGCAATCCCCGTTGGAATTT i cebCap1.NW_016107886v1 I 294 C 0 s aotNan1.NW_018492112v1 3436620 338 - 5030052 GTAACTATTAAATATATATTTTTATACATACACACACATCCCAAAGATGAACATTGATCCTTATCTTACTGATTCTCTAGACTCAAATGCTTACTGAAGTCAGGCAGATAaaaca--------aaaaccaaaatcaaccacagcaaacaagcaaacaGAAACTCAC-TGAGGTAGGGAAGTGCGTGCAGGAAACTGTAAGGCTGGGTGTGAGGAACTCTGTAGAGCTCCAGAATGAATAAgagtagcccccttcagcttcactgctttctgctatgtgggaaggtggggccagggtttccagaacttccagttcttaaatagagccgtgcaatccCCGTTGGAATTT i aotNan1.NW_018492112v1 I 293 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e canFam3.chr16 16998723 4 - 59632846 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=1530432.000000 s hg38.chr4_KI270789v1_alt 177935 412 + 205944 CTTGTATGTTGACTCAAAA-GGTTAAATATTGTGCAGATCAAACAAATAATTTCTGTGAGGAGGATTTAGTCAATGGGTAAGGAGTTTGTGACCTTTTGTCTAAACACATGAAAAGGAAGGGGACCATTTGCCTGACTGCTCTCTACTTTGCTACGTTCTTTCT-ACACCTGAGTTAGTGCTGGTGGA----AGAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CAGTCATGTACCCCCCCGTGACCCCCTCACTCTGGTTCAAAC-GCAAACACAAACTGAGAATAGGAAAATAATCCACTGCTGAGGCATGAACATAGCACCAAAGGATGCAGTACTCTAGTTGCAAAGAACTCTGGCTGAAATTTCCCCCACCTCACCTGCTTTCTCCTTTTATCTTACTCAAGGCTCATCTCTC-T- s panTro5.chr4 192962845 411 + 194502333 cttgtatgttgactcaaaa-ggttaaatattgtgcagatcaaacaaataatttctgtgaggaggatttagtcaatgggtaaggagtttgtgacctttTGTCTAAACACATGAAAAGGAAGGGGACCATTTGCCTGACTGCTCTCTACTTTGCTACGTTCTTTCC-ACACCTGAGTTAGTGCTGGTGGA----AGAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CGGTCATGTACCCCCT-GTGACCCCCTCACTCTGGTCCAAAC-GCAAACACAAACTGAGAATAGGAAAATAATCCACTGCTGAGGCATGAACATAGCACCAAAGGCTGCAGTACTCTAGTTGCGAAGAACTCTGGCTGAAATTTCCCCCACCTCACCTGCTTTCTCCTTTTATCTTACTCAAGGCTCATCTCTC-T- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845405 411 + 195804263 cttgtatgttgactcaaaa-ggttaaatattgtgcagatcaaacaaataatttctgtgaggaggatttagtcaatgggtaaggagtttgtgacctttTGTCTAAACACATGAAAAGGAAGGGGACCATTTGCCTGACTGCTCTCTACTTTGCTACGTTCTTTCC-ACACCTGAGTTAGTGCTGGTGGA----AGAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CGGTCATGTACCCCCT-GTGACCCCCTCACTCTGGTCCAAAC-GCAAACACAAACTGAGAATAGGAAAATAATCCACTGCTGAGGCATGAACATAGCACCAAAGGCTGCAGTACTCTAGTTGCGAAGAACTCTGGCTGAAATTTCCCCCACCTCACCTGCTTTCTCCTTTTATCTTACTCAAGGCTCATCTCTC-T- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3878678 411 + 4876863 cttgtatgttgactcaaaa-ggttaaatattgtgcagatcaaacaaataatttctctgaggaggatttagtcaatgggtaaggagtttgtgacctttTGTCTAAACTCATGAAAAGGAAGGGGACCATTTGCCTGACTGCTCTCTACTTTGCTACATTCTTTCC-ACACCTGAGTTAGTGCTGGTGGA----AGAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CAGTCATGTACCCCCT-GTGACCCCCTCACTGTGGTCCAAAC-GCAAACACAAACTGAGAATAGGAAAATAATCCACTGCTGAGGCATGAACATAGCACCAAAGGCTGCAGTACTCTAGTTGCGAAGAACTCTGGCTGAAATTTCCCCCACCTCACCTGCTTTCTCCTTTTATCTTACTCAAGGCTTATCTCTC-T- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767038 407 + 115148730 CTTGTACGTTGACTCAAAA-GGTTAAATATTGTGCAGATCAAACAAAAAGTTTCTGTGAGGAGGA-TTAGTCAATGGGTAAGGAGTTTGTGACCTTTTGTCTGAACACATGAAAAGGAAGGGGGCCATTTGCCTGACTGCTCTCTACTTTGCTACGTTCTTTCC-ACACCTGAGTTAGTGCTGGGGGA----AGAC---TGTTTCTTCTCCTACAT---GCAGCTGCTTT-CAGTCATGTACCCCCC-GTGACCCCCTCACTCTGGTCCAAAC-GCAAAGACAAATTGAGAATAGGAAAATAATCCACTGCTAAGGCATGAACATAGCACCAAAGGCTACAGTACTC-AGTTGCAAAGAACTCTGGCTGAAATTT-CCCCACCTCGTCTGTTTGCTCCTTTTATCTTACTCAAGGCGCATCTCTC--- i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 933682 411 + 2368649 CTTGTATGTTGACTCAAAA-GGTTAAATATTGTGCAGATCCAACAAA-AATTTCTGTGAGGAGGATTTAGTCAATGGGTAAGGAGTTTGTGAACGTTTGTCGAAACACATGAAAAGGAAGGGGACCATTTGCCTGACTGGTCTCTACTTTGCTAGGTTTTTTTCAACCCCTGAGTTAGTACTGGTAGA----AGAG---TGTTTCTTCTCCTTCAC---ACAGCGGCTTT-CAGTCATGTGTCCCCC-GTGACCCACTCACTCTGGTCTAAATAAAAAACACAAATTGAGAATAGGAAAATAATCCACTGCTAAGGCATGAGCATAGCACCAAAGGCCACAGTACTGTAGCTGCAAAGAACTCTGGTTGGAATTTCCCCCACCTCACCTGCTGTTTCCTTTTATGTTACTCAAGGCTCATCCCTC--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189665835 406 - 190850796 cttgtatgttgactc-aaa-ggttaaatattgtgcagataaaaaaac---attctgggaggaggatttagtcaatgggtaaggagtttgtgacctttTATCTAAACACATGAAAAGGAAGGGGACCATTTGCCTGACTGCTCTCTACTTTGCTAAGTTCTTTCC-ACAGCTGAGTTAATGCTGGTGGG----ATAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CACTCATGTACCCCCC-GGGACCTCCTCACTGTGGTCCAAAC-TCAAACACAAACTGAGAACAGGAAAATCATCCACTGCTAAGGCATGAACACAGTGCCAAAGGCTACAGTACTCTAGTTGCAAAGAACTCTGGTTGAAACTTCCCCCACCTCACCTGCATTTTCCTTTTATCTTATTCAGGGCTCATCTCTC--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159081 403 - 14256875 CTTGTATGTTGACTCAAAA-GGTTAAATATTGTGCAGATAAAAAAAA---ATTCTGGGAGGAGGATTTAGTCAATGGGTAAGGAGTTTGTGACCTTTTGTCTAAACACATGAAAAGGAAGGGGACCATTTGCCTCACTTGTCTCTACTTTGCTAGGTTCTTTCC-ACACCTGAATTACTACTGGTGGG----ATA-----GTTTCTTCTCCTTCAT---CCAGCTGCTTT-CATTCATGTACCCCTG-GTGACCCCCTCACTCTGGTCCAAAC-TCAAACACAAATTGAGAACAGGAAAATAATCCACTGCTAAGGCATGA--ACAGGGCCGAAGGCTACAGTACTGTAGTTGCAAAGAACTCTGGTTGAAATTTCCTCCATCTTGCCTGCATTTTCCTTGTATCTTATTCAGGGCTCATCTCTC--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1050736 401 - 2196201 CTTGTATGTGGACTCAAAA-GGTTAAATATTGTGTAGATAAAAAAA----ATTCTGGGAGGAGGATTTAGTCAATGGGTAAGGAGTTTGTGACCTTTTGTCTAAACACATGAAAAGGAAGGGGACCGTTTGCCTGACTGCTCTCTACTTTGCTGAGTTCTCTGC-ACACCTGAGTTAGTACTGGGGGG----TCA------TTTCTTCTCCTTCCT---CCAGCTGCCTT-CATTCAAGTACCCCC--GTCACCCCCTCACTCTGGTCCAAAC-TCAAACACAAATTGAGAACAGGAAAATAATCCACCGCTAAGGCATGAACACAGTGCCAAAGGCTACAGTACTCTAGCTGCAAAGAACTCTGGTTGAAATGTCCCCC-CCTCGCCTGCGTTTTCCTTGTATC-TATTCAGGGCTCATCTCTCT-- i cebCap1.NW_016107886v1 C 0 I 164 s aotNan1.NW_018492112v1 3436958 405 - 5030052 CTTGTATGTTGACTCGAAA-GGTTAAATATTGTGCAGATAAAAAAAA---ATTCTGGGAGGAAGATTTAGTCAATAGGTAAGGAGTTTGTGGCCTTTTATCTAAACACATGAAAAGGAAGGGGACCACTTGCCTGACTGCTCTCTACTTGGCTAAGTTCTTTCC-ACACCTGAGTTAGTACTGGTGGG----ATAG---TGTTTCTTCTCCTTCAT---CCAGCTGCTTT-CATTCATGTACCCTCC-ATGACCCCCTCAC--TGGTCCAAAC-TCAAACACAAATTGAGAACAGGAAAATAATCTACTGCTAAGGCATGAACACAGTGCCAAAGGCTACAGTACTCTAGTTGCAAAGAACTCTGGTTGAAATTTCCCCCACCTCGCCTGCATTTTCCTTTTATCTTGTTCAGGGCTCATCTCTC--- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16998727 411 - 59632846 CTTACATGTCGACTCAAAATAGTTAAGTCTTGTGCAGACCAAACAAAACTTTTCTGTGAGGAGGA-TTAGTCAATGAGCAATGAG--TGTGACCTGTGGTCTAAACAAATAAGAAAGTAAGGAAAGATCTGCCTAACTGCTTGATTGTTGGCAGTTATCTCTCA-ACACCTGAGTTAGTACTTCTAGGTTCTAGAGCGTTGTTTCTTCCCCTTCTTCAACAAGCTACTTTAAAATTATGTTGC-----CTGACCTACACACAC--ACACACAC-CAAAACACAAATCGAGACTAGGAAAGGAGTCTACTGCTGAGCCATGAACATATCTCTTAAAGCTACCCTATCCCAATTACAAAGAACCCTGGAGGAAACTTCCTCCACCTGACCTGGTCTT---ATTTATCTTATCCAAGACTCATTTCCC--T i canFam3.chr16 I 4 C 0 e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=290240.000000 s hg38.chr4_KI270789v1_alt 178347 93 + 205944 TCCAGTTCCTCTCTGGGGAAACAGGAGGGAGATTCTTCTTGTCACATAAAT-GTGTCCTGAAAGGATTCTCTCCTCCTTATATCTACTCCTTTA s panTro5.chr4 192963256 93 + 194502333 TCCAGTTCCTCTCTGGGGAAACAGGAGGGAGATTCTTCTTGTCACATAAAT-GTGTCCTGAAAGGATTCTCTCCTCGTTATATCTACTCCTTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845816 93 + 195804263 TCCAGTTCCTCTCTGGGGAAACAGGAGGGAGATTCTTCTTGTCACATAAAT-GTGTCCTGAAAGGATTCTCTCCTCGTTATATCTACTCCTTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879089 92 + 4876863 TCCAGTTCCTCTCTGGGGAAACAGGAGGGAGATTCTTCTTGTCACATAAAT-GTGTCCTGAAAGGATTCTCTCCTCGTTATATCTACTCC-TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767445 93 + 115148730 TCCAGTTCCTCTCTGCGGAAGCAGGAGGGAGATTCTTCTTGTCACATAAAT-GTGTCCTGAAACGATTCTCTCCTTGTTGTATCTACTCCTTTA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934093 93 + 2368649 TCCAGTTCCTCTCTGGGGAAGCAGGAGGGAGAATCTTCTTGTCACATaaat-gtgtcctgaaacaattctctcctcgttatatctactcctttg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666241 93 - 190850796 TCCAATTCCTCCCTCGGAAAGCAGGAGAAGGGCTCTTCTTGTGGCATAAAT-GTGTCCTGAAACTGTTCTCTCCTCGTTATGTCTACTCCTTCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159484 93 - 14256875 CCCAATTCCTCTCTGGGAAAGCAGGAGGGGGGCTCTTCTTGTCACATAAAT-GTGTCCTGAAACTATTCTCTCCTCCTTATACCTACTCCTTCC i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3437363 92 - 5030052 TCCAATTCCTCTATGGGAAAGCAGGAGGGGGACTCTTCTTGTCACATAAAT-GTGTCCTG-AACTATTTTCTCCTCATTATATCTACTCCTTCA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16999138 91 - 59632846 GCCAGG--CTCACTGGGGAAGCAGAAACAGGATTCCTC-TGTTACTTAAGTAGTGTCCTGAAACTATTGTCTCCTCTCTCTATCTACCCTTTCA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1495472 2953 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=248200.000000 s hg38.chr4_KI270789v1_alt 178440 75 + 205944 ATCTGAGTTCAAGTCATCAACACCTCTCACCTGGCCCACTTGCCAACTTCCATACCGTCTGTCTCCATCCTCTAA s panTro5.chr4 192963349 75 + 194502333 ATCTGAGTTCAAGTCATCAACACCTCTCACCTGGCCCACTTGCCAACTTCCATACCGTCTGTCTCCATCCTCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845909 75 + 195804263 ATCTGAGTTCAAGTCATCAACACCTCTCACCTGGCCCACTTGCCAACTTCCATACCGTCTGTCTCCATCCTCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879181 75 + 4876863 ATCTGAGTTCAAGACATCAACACCTCTCACCTGGCCCACTTGCCAACTTCCATACCGTCTGTCTCCATCCTCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767538 75 + 115148730 ATCTGAATTCAAGTCATCAACACCTCTCACCTGGCCCACTTGCCAACTTCCATATCATCTGTCTCCATCCTCTAA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934186 75 + 2368649 atccgagttcaagtcatcaacacctcttacctggCCCTCTTGCCAACTTCCATACCATCTGTCTCCATCCTCTAA i colAng1.NW_012116221v1 C 0 I 10 s calJac3.chr3 189666334 67 - 190850796 GTCTGAGT--------TCAGCACCTTTCTTCTGGCCCACTTGCTAGCTGGCATGACGTTTGCCTCCATCCTCTGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159577 75 - 14256875 ATCTGAGTTCAAGCTATCAGCACCTATCTTCTGGCCCACTTGCCAGCTGGCATCACATTTGCCTCCATCCTCTGA i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3437455 75 - 5030052 ATCTGAGTTCAAGCTATCAGCACCTCTCTTCTGGCCCACTTGCCAGCTGGCATAACGTTTGCCTCCGTCCTCTGA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16999229 75 - 59632846 ATATGAGTTCAAGGTCTCATCACTTCTCATCTGGCCTATTCATCAATTTACATGAAGTTTGTCACCAGCCTGTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498425 67 - 2520184 ATCTGAGTCCAAGTTCTCA-------TCATCTGGCC-ATGCATCAATTTACATGAAGTTTACCTCCATATTCCAA i dasNov3.JH570353 I 2953 C 0 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=26758.000000 s hg38.chr4_KI270789v1_alt 178515 11 + 205944 AACAAACTTTC s panTro5.chr4 192963424 11 + 194502333 AACAAACTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845984 11 + 195804263 AACAAACTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879256 11 + 4876863 AACAAACTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767613 11 + 115148730 CACAAACTTTA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189666401 11 - 190850796 CACAACCTTCC i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13159652 11 - 14256875 CACAACCTTTC i saiBol1.JH378165 C 0 I 3 s aotNan1.NW_018492112v1 3437530 11 - 5030052 CACAACCTTTC i aotNan1.NW_018492112v1 C 0 I 3 s canFam3.chr16 16999304 11 - 59632846 TCCAAACTTCC i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1498492 11 - 2520184 ATCAGATTTTC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e colAng1.NW_012116221v1 934261 10 + 2368649 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=202167.000000 s hg38.chr4_KI270789v1_alt 178526 82 + 205944 -CATGTGGACAAAGCTGTCCTTTCTCATGCCTCAGACGCCACTGAGGGCACACCAAGGCCATTGGCGGCGTGGCCGTGGACTT s panTro5.chr4 192963435 82 + 194502333 -CATGTGGACAAAGCTGTCCCTTCTCATGCCTCAGACGCCACTGAGGGCACACCAAGGCCATTGGCGGCGTGGCTGTGGACTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192845995 82 + 195804263 -CATGTGGACAAAGCTGTCCCTTCTCATGCCTCAGACGCCACTGAGGGCACACCAAGGCCATTGGCGGCGTGGCCGTGGACTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879267 82 + 4876863 -CATGTGGACAAAGCTGTCCTTTCTCATGCCTCAGACGCCACTGAGGGCACACCAAGGCCATTGGCGGCGTGGCCGTGGACTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767624 82 + 115148730 -CGTGTGGACAAAGCTGTCCTTTCTCATGCCTCAGACGCCACCGTGGGCCCACCAAGGCCGTTTGCGGCGTGGCCGTGGACTT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934271 82 + 2368649 -CATGTGGACAATGTTGTCCTTTCTCATGCCTCAGACGCCACTGAGGGCACAGCAAGGCCATCTGCGGCATGGCCGTGGACTT i colAng1.NW_012116221v1 I 10 T 92 s calJac3.chr3 189666415 82 - 190850796 -TGTGGGGACGATGCTATACTTCCTCATGCCTCAGACACCTCTGTGGACACACCAAGGTCATTTGCTGCATGGCTTTGGACTT i calJac3.chr3 I 3 I 1 s saiBol1.JH378165 13159666 81 - 14256875 -TGTGGGGACAATGCTATACTTTCTCATGCCTCAGACGCCACTGTGGACACA-CAGGGTTATTTGCTGCCTGGCCTTGGACTT i saiBol1.JH378165 I 3 I 1 s aotNan1.NW_018492112v1 3437544 36 - 5030052 -TGTGGGGACAATGCTATACTTTCTCATGCCTCAGAC---------------------------------------------- i aotNan1.NW_018492112v1 I 3 C 0 s canFam3.chr16 16999316 59 - 59632846 -TCTGTTGACAA---TATCCTTACTTATGTCTTAGACACCATGTTGGACATGCCAGAGTCACT-------------------- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1498503 83 - 2520184 CTCTGTTGCTAATGAGAACAGTGCTTATACCTCAGTCACCATCATGGACCCAACAAAGTCACCTGCTGCACTGCCTTGGCCTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=910.000000 s hg38.chr4_KI270789v1_alt 178608 1 + 205944 A s panTro5.chr4 192963517 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846077 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879349 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767706 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 e calJac3.chr3 189666497 1 - 190850796 I e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1498586 0 - 2520184 C e canFam3.chr16 16999375 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437580 0 - 5030052 C e saiBol1.JH378165 13159747 1 - 14256875 I e colAng1.NW_012116221v1 934353 92 + 2368649 T e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=5348.000000 s hg38.chr4_KI270789v1_alt 178609 2 + 205944 CA s panTro5.chr4 192963518 2 + 194502333 CA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846078 2 + 195804263 CA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879350 2 + 4876863 CA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767707 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934261 2 + 2368649 CA i colAng1.NW_012116221v1 T 92 C 0 s calJac3.chr3 189666498 2 - 190850796 CA i calJac3.chr3 I 1 T 97 s saiBol1.JH378165 13159748 2 - 14256875 CA i saiBol1.JH378165 I 1 T 96 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e dasNov3.JH570353 1498586 0 - 2520184 C e canFam3.chr16 16999375 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437580 0 - 5030052 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=13624.000000 s hg38.chr4_KI270789v1_alt 178611 27 + 205944 CAAACTTTCCA----------------------------------------------------------------------------------------------TGTGGACAAAGCTGTC s panTro5.chr4 192963520 27 + 194502333 CAAACTTTCCG----------------------------------------------------------------------------------------------TGTGGACAAAGCTGTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846080 27 + 195804263 CAAACTTTCCG----------------------------------------------------------------------------------------------TGTGGACAAAGCTGTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879352 27 + 4876863 CAAACTTTCCA----------------------------------------------------------------------------------------------TGTGGACAAAGCTGTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767709 121 + 115148730 CAAACTTTCCGTGTGGACAAAGCTGTCCTTTCTCATGTCTCAGACGCCACCGTGGGCCCACCAAGGCCGTTTGCTGCGTGGCCGTGGACTTACACAAACTTTCCATGTGGACAAAGCTGTC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934263 26 + 2368649 CAAACTTT-CA----------------------------------------------------------------------------------------------TGTGGACAATGTTGTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666403 30 - 190850796 CAACCTTCCCA-------------------------------------------------------------------------------------------TTGTGGGGACGATGCTATA i calJac3.chr3 T 97 C 0 s saiBol1.JH378165 13159654 30 - 14256875 CAACCTTTCCG-------------------------------------------------------------------------------------------TTGTGGGGACAATGCTATA i saiBol1.JH378165 T 96 C 0 s dasNov3.JH570353 1498586 10 - 2520184 ----TTTTGCA--------------------------------------------------------------------------------------------------------GTT--- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051137 164 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e canFam3.chr16 16999375 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437580 0 - 5030052 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=145905.000000 s hg38.chr4_KI270789v1_alt 178638 56 + 205944 CTTTCTCATGCCTCAGATGCCACTGTGGGCCCACCAAGGCCGTTTGCGGCGTGGCC s panTro5.chr4 192963547 56 + 194502333 CTTTCTCATGCCTCAGATGCCACTGTGGGCCCACCAAGGCCGTTTGCGGCGTGGCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846107 56 + 195804263 CTTTCTCATGCCTCAGATGCCACTGTGGGCCCACCAAGGCCGTTTGCGGCGTGGCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879379 56 + 4876863 GTTTCTCATGCCTCAGATGCCACTGTGGGCCCACCAAGGCCGTTTGCGGCGTGGCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767830 56 + 115148730 CTTTCTCATGCCTCATATGCCACTGTGGGCCCACCAAGGCTGTTTGCGGCGTGGCC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934289 56 + 2368649 CTTTCTCATGCCTCAGACGCCACTGAGGGCACAGCAAGGCCATCTGCGGCATGGCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666433 56 - 190850796 CTTCCTCATGCCTCAGACACCTCTGTGGACACACCAAGGTCATTTGCTGCATGGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159684 55 - 14256875 CTTTCTCATGCCTCAGACGCCACTGTGGACACA-CAGGGTTATTTGCTGCCTGGCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1051301 56 - 2196201 CTTCCTCATGCCTCAGACGCCACTGTGGACATACCAAGGTCGTTTGCTGAGTGGCC i cebCap1.NW_016107886v1 I 164 I 78 s aotNan1.NW_018492112v1 3437580 38 - 5030052 ------------------ACCACTGTGGACACCCCAGGGTCATTTGCTGCATGGTC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 16999375 10 - 59632846 ----------------------------------------------CTGCATTGTC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498596 34 - 2520184 -TTGTTCACACACCATACACT--------CCATCCAAAGCCTT------------- i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=29438.000000 s hg38.chr4_KI270789v1_alt 178694 10 + 205944 GTGGACTTTC s panTro5.chr4 192963603 10 + 194502333 GTGGACTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846163 10 + 195804263 GTGGACTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879435 10 + 4876863 GTGGACTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767886 10 + 115148730 GTGGAGTTTC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934345 10 + 2368649 GTGGACTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666489 10 - 190850796 TTGGACTTCC i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13159739 10 - 14256875 TTGGACTTTC i saiBol1.JH378165 C 0 I 1 s aotNan1.NW_018492112v1 3437618 10 - 5030052 TTGGACTTTC i aotNan1.NW_018492112v1 C 0 I 1 s canFam3.chr16 16999385 9 - 59632846 TTGAACTTT- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498630 7 - 2520184 --GGACTTC- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051357 78 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=1883.000000 s hg38.chr4_KI270789v1_alt 178704 1 + 205944 C s panTro5.chr4 192963613 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846173 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879445 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767896 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934355 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s canFam3.chr16 16999394 1 - 59632846 C i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498637 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189666499 1 - 190850796 I e cebCap1.NW_016107886v1 1051357 78 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437628 1 - 5030052 I e saiBol1.JH378165 13159749 1 - 14256875 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=141347.000000 s hg38.chr4_KI270789v1_alt 178705 48 + 205944 TTATGGTCACCAACCTGCAGCCTTAAGCTTTCACTCACCCTCTT---TGTC-------------- s panTro5.chr4 192963614 48 + 194502333 TTATGGTCACCAACCTGCAGCCTTAAGCTTTCACTCACCCTCTT---TGTC-------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846174 48 + 195804263 TTATGGTCACCAACCTGCAGCCTTAAGCTTTCACTCACCCTCTT---TGTC-------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879446 48 + 4876863 TTATGGTCACCAACCTGCAGCCTTAAGCTTTCACTCACCCTCTT---TGTC-------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767897 48 + 115148730 TTATGGTCACCAACCTGCAGCCATAAGCTTTCACTCACCCTCTT---TGTC-------------- i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934356 48 + 2368649 TTATGGTCACCAACCTGCAGCCGTAAACTTTCACTCACCCTCTT---GGTC-------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666500 51 - 190850796 TTAAGGTCACCAGCATGCCACCGCAAGCTTGCACTCACGCTCTTGTCTGTC-------------- i calJac3.chr3 I 1 I 13 s saiBol1.JH378165 13159750 51 - 14256875 TTATGGTCACCAGCATGCCACCGCAAGCGTTCACTCACCCTCTTGTCTGTC-------------- i saiBol1.JH378165 I 1 I 13 s aotNan1.NW_018492112v1 3437629 51 - 5030052 TTATGGTCACCAGCATGCCACCTCAAGCTTTCACTCACCCTCTTGTCTGTC-------------- i aotNan1.NW_018492112v1 I 1 I 13 s canFam3.chr16 16999395 49 - 59632846 TTGTGGTTACCAAC-TGTGACCATAGGCTCTCATGCACATTCTT-TCCACC-------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498638 59 - 2520184 TTATGGTTCCTAGAATGTAACCATAAG-----GCTCGCTCTGTA-TCTGTCCACCTATGATACTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051357 78 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=659784.000000 s hg38.chr4_KI270789v1_alt 178753 155 + 205944 TGT---------CCCCAGACTTAAATCTTTTCTTCATGTTGACCCTTGAAATACG-TGTATTCATGAAGACCTGTTCAATCACACTCTGGATTTTCAAAGTTG-AAAATAACAGGAAGTTACTACGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC s panTro5.chr4 192963662 155 + 194502333 TGT---------CCCCAGACTTAAATCTTTTCTTCATGTTGACCCTTGAAATACG-TGTATTCATGAAGACCTGTTCAATCACACTCTGGATTTTCAAAGTTG-AAAATAACAGGAAGTTACTACGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846222 155 + 195804263 TGT---------CCCCAGACTTAAATCTTTTCTTCATGTTGACCCTTGAAATACG-TGTATTCATGAAGACCTGTTCAATCACACTCTGGATTTTCAAAGTTG-AAAATAACAGGAAGTTACTACGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879494 156 + 4876863 TGT---------CCCCAGACTTAAATCCTTTCTTCATGTTGACCCTTGAAATACG-TGTATTCATGAAGCCCTGTTCAATCACACTCTGGATTTTCAAAGTTGAAAAATAACAGGAAGTTACTACGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112767945 154 + 115148730 TGT---------CCCCAAACTTAAATTCTTTCTTCATGTTGACCCTTGAAATACG-TGTATTCATGAAGACCTGTTCAATCACACTCTGGATTTTCAAAGTTG-AAAATAACAGAAAGTTAC-ATGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934404 155 + 2368649 TGT---------CCCCAGACTGAAATTCTTTCCTCATGTTGACCCTTGAAATACG-TGTTTTCATAAAGACCTGTTCAATCACACTCTGGATTTTCAAAGTTG-AAAATAACAGAAAGTTACTATGGCAATGATGATTTAGTGAAAAATATGAAGGAATCAGTGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666564 155 - 190850796 TGT---------CCTCACACTTAAATTCTTTCTTCATGTTGACCCGTGAAAATCG-TGTTTCCATGAAAACCTGTTCAGTCACAGTCTGGATTTTCAGAGTTG-GAAATAACAGAAAGTTACTATGATGATGAAGATTTAGTGAAAAATACGAAGGATGCAGTGAC i calJac3.chr3 I 13 C 0 s saiBol1.JH378165 13159814 153 - 14256875 TGT---------CCCCAGACTTAAATTCTTTCTTCATGTTGACCCATGAAAATCG-TGGTTCCATGAAAACCTGTTGAATCACACTCTGGATTTTCAGAGTTG-GAAATAACAG--AGTTACTATGATGATGAAGATTTAGTGAAAAATATGAAGGAATCAGTGAC i saiBol1.JH378165 I 13 C 0 s cebCap1.NW_016107886v1 1051435 155 - 2196201 TGT---------CCCCAGACTTGAATTCTCTCTTCATGTTGACCCGTGAAAACCG-TGTTTCCATGAAAACCTGTTCAATCACACTCTGGATTTTCAGAGTTG-GAAATAACAGAAAGTTACTATGACGATGAAGATTTAGTGAAAAATATGAAGGAATCAGGGAC i cebCap1.NW_016107886v1 I 78 C 0 s aotNan1.NW_018492112v1 3437693 155 - 5030052 TGT---------CCCCAGACTTAAATTCTTTCTTCATGTTGACCCGTGAAAATCG-TGTTTCCATGAAAACCTGTTCAATCACACTCTGGATTTTCAGAGTTG-GAAATAACAGAAAGTTACTATGATGATGAAGATTTAGTGAAAAATATGAAGGAATGAGTGAT i aotNan1.NW_018492112v1 I 13 C 0 s canFam3.chr16 16999444 154 - 59632846 TATTAAACTCCACCCGAGACTTAAATCC---CTCAACATTGATCCTTGAAATGGT-TATTTCAATCAAAATCTATTTAACCACAATCAGGATTATTTAAATTG-AAAATAATA-----TTACTATGACAACAAAAATTTAGTGGAAAATGTCA--GAATCAGAAAC i canFam3.chr16 C 0 I 506 s dasNov3.JH570353 1498697 154 - 2520184 TGT---------CTCCAGACCTACATTCTCTCTTAAT-TGGACACTTGAAATAGGATTTTCCCATAACAATCTATTCAACTTCAGTTAGGATTGT-AAACTTG-AAAATAACAAAGCATGACCATGGCAATGACAATTTAATTAGAAATAGTAGGGAATGAGAGAT i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=61910.000000 s hg38.chr4_KI270789v1_alt 178908 20 + 205944 --------------TCAACAATTTTTGG-------------------------GCCCCA s panTro5.chr4 192963817 20 + 194502333 --------------TCAACAATTTTTGG-------------------------GCCCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846377 20 + 195804263 --------------TCAACAATTTTTGG-------------------------GCCCCA i panPan2.chr4 C 0 I 1 s gorGor5.CYUI01015356v1 3879650 20 + 4876863 --------------TCAACAATTTTTGG-------------------------GCCCCA i gorGor5.CYUI01015356v1 C 0 I 2 s nomLeu3.chr7b 112768099 20 + 115148730 --------------TCAACAATTTTTGG-------------------------GCCCCA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934559 20 + 2368649 --------------TCAACAATCTTTGG-------------------------GCCCCG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666719 20 - 190850796 --------------TCAACAATCTCTGG-------------------------GCCCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159967 20 - 14256875 --------------TCAACAATCTCTGG-------------------------GCCCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1051590 19 - 2196201 --------------TCAACAATCTCCGG-------------------------GCCCC- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3437848 20 - 5030052 --------------TCAACAATCTCTGG-------------------------GCCCCA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1498851 59 - 2520184 TTGGTGAAAGGTAAAAGACAAGATTTGGAAAAATGTGACCCTGTGTCTATTACACCACA i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e canFam3.chr16 16999598 506 - 59632846 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=149913.000000 s hg38.chr4_KI270789v1_alt 178928 43 + 205944 TTTTTTT-----------TTTCCTTCACCAGAGGATAATGTTA-----ATA------TGAAGAGG s panTro5.chr4 192963837 43 + 194502333 TTTTTTT-----------TTTCCTTCACCTGAGGATAATGTTA-----ATA------TGAAGAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846398 43 + 195804263 TTTTTTT-----------TTTCCTTCACCTGAGGATAATGTTA-----ATA------TGAAGAGG i panPan2.chr4 I 1 C 0 s gorGor5.CYUI01015356v1 3879672 43 + 4876863 TTTTTTT-----------TTTCCTTCACCTGAGGATAATGTTA-----ATA------TGAAGAGG i gorGor5.CYUI01015356v1 I 2 C 0 s nomLeu3.chr7b 112768119 42 + 115148730 -TTTTTT-----------TTTCCTTCACCTGAGGATGATGTTA-----ATA------TTAAGAGG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934579 43 + 2368649 TTTACTT-----------TTTCCTTCACCTGGAGATGATGTTC-----ACA------TTAAGAGG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666739 40 - 190850796 --TTTTT-----------T-TCCTTCACCTGGGGATAATGTTG-----ATA------TTAAGAGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13159987 41 - 14256875 --TTTTT-----------TCTCCTTCACCTGGGGATAATGTTG-----ATA------TTAAGACG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1051609 40 - 2196201 --TTTTT-----------T-TCCTTCACCTGGGGATAATGTTG-----ATA------TTAAGAGG i cebCap1.NW_016107886v1 C 0 I 593 s aotNan1.NW_018492112v1 3437868 41 - 5030052 --TTTTT-----------TTCCCTTCACCTGGGGATAATGTTG-----ATA------TTAAGAGG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17000104 47 - 59632846 TTTTTGT-----------TCTCATTCACATAGGGCTGATGTTACACCTATA------TAAGAAT- i canFam3.chr16 I 506 C 0 s dasNov3.JH570353 1498910 58 - 2520184 --TTCTTCGAACATGATGTTTCCTACTCACAGGGAAAATGTTA-----ATACCTAACTGAGAAGG i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=39258.000000 s hg38.chr4_KI270789v1_alt 178971 11 + 205944 TTGGTTGTCAA s panTro5.chr4 192963880 11 + 194502333 TTGGTTGTCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846441 11 + 195804263 TTGGTTGTCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879715 11 + 4876863 TTGGTTGTCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768161 11 + 115148730 ATGGTTGTCAA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934622 11 + 2368649 ATGGTTGTCAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666779 11 - 190850796 TTGGTCGTAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13160028 11 - 14256875 ATGGTTGTAAA i saiBol1.JH378165 C 0 I 574 s aotNan1.NW_018492112v1 3437909 11 - 5030052 ATGGTCGTAAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17000151 11 - 59632846 ATAGTTGTAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498968 9 - 2520184 --GGTTGTAAA i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051649 593 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=15119.000000 s hg38.chr4_KI270789v1_alt 178982 4 + 205944 TATT s panTro5.chr4 192963891 4 + 194502333 TATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846452 4 + 195804263 TATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879726 4 + 4876863 TATT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768172 4 + 115148730 TATT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934633 4 + 2368649 TATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189666790 4 - 190850796 TATT i calJac3.chr3 C 0 I 579 s saiBol1.JH378165 13160613 4 - 14256875 TACT i saiBol1.JH378165 I 574 C 0 s aotNan1.NW_018492112v1 3437920 4 - 5030052 TATT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17000162 4 - 59632846 GATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498977 4 - 2520184 GATT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1051649 593 - 2196201 I e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=11264.000000 s hg38.chr4_KI270789v1_alt 178986 2 + 205944 AC s panTro5.chr4 192963895 2 + 194502333 AC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846456 2 + 195804263 AC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879730 2 + 4876863 AC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768176 2 + 115148730 AC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934637 2 + 2368649 AC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189667373 2 - 190850796 AC i calJac3.chr3 I 579 C 0 s saiBol1.JH378165 13160617 2 - 14256875 AC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1052242 2 - 2196201 AC i cebCap1.NW_016107886v1 I 593 C 0 s aotNan1.NW_018492112v1 3437924 2 - 5030052 AC i aotNan1.NW_018492112v1 C 0 I 705 s canFam3.chr16 17000166 2 - 59632846 AC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1498981 2 - 2520184 GC i dasNov3.JH570353 C 0 C 0 e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=588836.000000 s hg38.chr4_KI270789v1_alt 178988 173 + 205944 AACTTTAGAAAGAGGAATACATGTATGTATGTATTcttttatatttatgggagttaccttctgaaacctttgaacatcaccaatattgcggataaccatatgttttgataagctcttgggttt-----atctcgcattgcgatcaagaat--tgttttcactgcatatcctccaactaca s panTro5.chr4 192963897 173 + 194502333 AAATTTAGAAAGAGGAATACATGTATGTATGTATTcttttatatttatgggagttaccttctgaaacctttgaacatcaccaatattgcggataaccatatgttttgataagctcttgggttt-----atctcgcattgtgatcaagaat--tgttttcactgcatatcctccaactaca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846458 173 + 195804263 AAATTTAGAAAGAGGAATACATGTATGTATGTATTcttttatatttatgggagttaccttctgaaacctttgaacatcaccaatattgcggataaccatatgttttgataagctcttgggttt-----atctcgcattgtgatcaagaat--tgttttcactgcatatcctccaactaca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879732 173 + 4876863 AACTTTAGAAAGAGGAATACATGTATGTATGTGTTcttttatatttatgggagttaccttctgaaacctttgaacatcaccaatactgcggataaccatatgttttgatcagctcttgggttt-----atctcgcattgcgatcaagaat--tgttttcactgcatatcctccaactacg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768178 173 + 115148730 AACTTTAGAAAGAGGAACACATGTATGCATATATTcttttatatttatgggagttaccttctgaaacctttgaacatcaccaatattgcagataaccatatgttttgataagctcttgggttt-----atctcacgttgcgatcaagaat--tgttttcaccgcatatcctccaactaca i nomLeu3.chr7b C 0 I 2 s colAng1.NW_012116221v1 934639 168 + 2368649 AACTTTAGAAAGAAGAATATATGTACGTATGTA-----TTGTatttatgggagttaccttctgaaacctttgaacatcaccagtattgcagagaaccaaatgttttgataagctcttgggttt-----atcttgcattgcgatcaagaat--tgtttgccttgcatatcctccaactaca i colAng1.NW_012116221v1 C 0 I 2 s calJac3.chr3 189667375 163 - 190850796 AACTTCAGAAAGAGGAATGCATGGAT-GGTGTATTATTTTATATTTATGGGAGTTCCCTTGTGAAACCTTTGAACATCACCAGTATTGCAGATAACCACATGATTTGAGAAGCTCTTGGGTTT-----ATTGTGCATTTCTATCAACAAC--TGTTTTCACTG---------CCATTACA i calJac3.chr3 C 0 I 2 s saiBol1.JH378165 13160619 173 - 14256875 AACTTCAGAAAGAGGAATGCATGGATGGGTGCATTATTTCGTatttatgggagttaccttctgaaaccttagaacatcaccaatattgcagataaccaaatgttttgagaagctcttgggttt-----atcttgcacttctatcaacaac--tgttttcactgcgtatcctcccattaca i saiBol1.JH378165 C 0 I 2 s cebCap1.NW_016107886v1 1052244 173 - 2196201 AACTTCAGAAAGAGGAATGCATGGATGGGTGTATTATttcatatttatgggagttaccttctgaaacctttgaacatcaccaatattgcagataaccaaatgctttgagaagctcttgggctt-----atcttgcacttctatcaacaat--tgttttcactgcatatcctcccattaca i cebCap1.NW_016107886v1 C 0 I 2 s canFam3.chr16 17000168 169 - 59632846 AACCTTAGGAAGAA---------TGTGTATTTATTCTTTTATATTTATGGGCATTATCTTTGgaaacctttgaatatcactaatatcgaggataaagaaatgttttgacaggctcttgggtttctc--atattgtatttctatcaagaattatgtttccactgcttgtcctcacactaca i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1498983 177 - 2520184 AATCTTGGGAAAGGAACTATTCAGGTGTGTGCCTTCTTTTATATTTACAAGAG-TACCTTCTG-AACCTTTGAATATTGCCAATA-AGAGTATAAATCaatgtttttaaaggattttgaatttctcatatgttgcatttctgtcatgattaatgctttcactgaatattttctcactaca i dasNov3.JH570353 C 0 I 2 e micMur3.chr14 17549469 850 - 93316391 I e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437926 705 - 5030052 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=321439.000000 s hg38.chr4_KI270789v1_alt 179161 79 + 205944 ttaaatgccttttcaacattctttacaattttCTACGTGGCAAAAGATACCATAAACAAAACTAAAGACAAATAACAGA s panTro5.chr4 192964070 79 + 194502333 ttaaatgccttttcaacattctttacaattttCTACGTGGCAAAAGATACCATAAACAAAACTAAAGACAAATAACAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846631 79 + 195804263 ttaaatgccttttcaacattctttacaattttCTACGTGGCAAAAGATACCATAAACAAAACTAAAGACAAATAACAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879905 79 + 4876863 ttaaatgccttttcaacattctttacaattttCTACGTGGCAAAAGATACCATAAACAAAACTAAAGACAAATAACAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768353 79 + 115148730 ttaactgccttttcaacattcTTTACAATCTTCTACGTGGCAAAAGATACCATAAATAAAACTAAAGACAAATAACAGA i nomLeu3.chr7b I 2 C 0 s colAng1.NW_012116221v1 934809 79 + 2368649 ttgactgccttttcaacattctttacagtCTCCTATGAGGCAAAAGATACCATAAACAAAACTAAAGACAAATAACAGA i colAng1.NW_012116221v1 I 2 C 0 s calJac3.chr3 189667540 67 - 190850796 TTAACTGCCTT-------TTCTTTACAGTCTTCTCCATGGCCAAGAAGACCAT-----AAACTAAAGACAAATAACAGA i calJac3.chr3 I 2 C 0 s saiBol1.JH378165 13160794 79 - 14256875 ttgactgccttttcaaAGTTCTTTACAATCTTCTCCATGCTGAAAAAGACCATAAACAAAACTGAACACAAATGACAGA i saiBol1.JH378165 I 2 C 0 s cebCap1.NW_016107886v1 1052419 79 - 2196201 ttaactgccttttcaacattctttacaatcttctcCATGGCCAAAAAGACCATAAACAGAACTAAAGACAAATAACAGA i cebCap1.NW_016107886v1 I 2 C 0 s micMur3.chr14 17550319 79 - 93316391 ttaattgccttttcaacATTTTTTACAATCTTCTACATGACAAAAGATACTATAAGCAAAACTAATGACAAGTAACAGA i micMur3.chr14 I 850 I 1049 s canFam3.chr16 17000339 71 - 59632846 ttaactgccttttcaacattcTTTACAATCTCCTGCATGACAAAATATACCATAAAGGAAACTAAAGACAA-------- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1499162 69 - 2520184 gtaactggcttttcatcatt-tttacAATATTATACATTAAAAATCATA---------AAGCTAAAGACAAGGAGCAGA i dasNov3.JH570353 I 2 C 0 e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437926 705 - 5030052 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=59224.000000 s hg38.chr4_KI270789v1_alt 179240 18 + 205944 CTGG-AGAAAATATTGTTT s panTro5.chr4 192964149 18 + 194502333 CTGG-AGAAAATATTGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846710 18 + 195804263 CTGG-AGAAAATATTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3879984 18 + 4876863 CTGG-AGAAAATACTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768432 18 + 115148730 CTGG-AGAAAATATTGTTT i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934888 18 + 2368649 CTGG-AGAAAATATTGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189667607 18 - 190850796 CTGG-AGAAAATAATGTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13160873 18 - 14256875 CTGG-AGAAAAGAATGTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1052498 18 - 2196201 CTGG-AGAAAATAATGTTT i cebCap1.NW_016107886v1 C 0 C 0 s dasNov3.JH570353 1499231 19 - 2520184 CTGGTAGAAAAAATTCTCT i dasNov3.JH570353 C 0 I 4130 e micMur3.chr14 17550398 1049 - 93316391 I e canFam3.chr16 17000410 0 - 59632846 C e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437926 705 - 5030052 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=283106.000000 s hg38.chr4_KI270789v1_alt 179258 93 + 205944 GCTTTGAGTATAACGTGGTAAGTTACGAAGGAAATGACAGGACACTAAATATGGGAAAATGAGTAAATATACCAAGAGCAAATTCAGAAAGAC-- s panTro5.chr4 192964167 93 + 194502333 GTTTTGAGTATAACATGGTAAGTTACGAAGGAAATGACAGGACACTAAATATGGGAAAATGAGTAAATATACCAAGAGCAAATTCAGAAAGAC-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846728 93 + 195804263 GTTTTGAGTATAACATGGTAAGTTACGAAGGAAATGACAGGACACTAAATATGGGAAAATGAGTAAATATACCAAGAGCAAATTCAGAAAGAC-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880002 93 + 4876863 GTTTTGAGTATGACATGGTAAGTTACTAAGGAAATGACAGGACACTAAATATGGGAAAATGAGTAAATATACCAAGAGCAAATTCAGAAAGAC-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768450 93 + 115148730 GTTTTGAGTATAACATGATAAGTTACTAAGGAAATGACAGGACACTAAAtatgcaaaaatgagtaaatataccaagagcaaattcagaaagac-- i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934906 93 + 2368649 GTTTTGAGTACAACATGGTGAGTTACTAAGGAAATGACAGGACACTACATATGGGAAAATGAGTAAATAGACCAAGAGCAAATTCTGAAAGGC-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189667625 87 - 190850796 GCTTTGCGTGTGACATAGTAAGTTACTAAGGAAATGA------GCTAAATAAGGGAAAACGAGTAAATATACCAAGAGCAAATTCAGAAGGAC-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13160891 93 - 14256875 GCTTTGCATGTAACATAGTAAGTTACTAAGGAAATGACAAGACACTAAATACAGGAAAACCAGTAAACATACCAAGAGCAAATTCAGAAAGAC-- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1052516 93 - 2196201 GCTTTGCGTATAACATGGTAAGTTACTAAGGAAATGACAGGACACTAAATAAGGGAAAATGAGTCAATATACCAAGAGCAAATTCAGAAAGAC-- i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 17000410 78 - 59632846 -----------------TCAAATTAAGAAGGAAATGACAAAACATTGAATAAGGTTAAATGGATAAAGAAACAAATAGCAAATTCACAAAAAAAC i canFam3.chr16 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1499250 4130 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e aotNan1.NW_018492112v1 3437926 705 - 5030052 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=632778.000000 s hg38.chr4_KI270789v1_alt 179351 181 + 205944 CTGTGCAATGAGACACAAAATTATTTTTAAAA-----TTATAAAAATAAGCTTAATCTCACTAATAATCTGAGGACTACATGTTAAAATGGCAATGGAATTTCTTTGATG--------ACCAAATATCG----TTGTTTGATCATGTCAAGGGCAAGTGGGCAGGGAG----------------------------------------------------------------------------------------------------AAATGTGTACTCCTCAACTGCAGATAAAAA s panTro5.chr4 192964260 181 + 194502333 CTGTGCAGTGAGACACAAAATTATTTTTAAAA-----TTATAAAAATACGCTTAATCTCACTAATAATCTGAGGACTACATGTTAAAATGGCAATGGAATTTCTTTGATG--------ACCAAATATCA----TTGTTTGATCATGTCAAGGGCAAGTGGGCAGGGAG----------------------------------------------------------------------------------------------------AAATGTGTACTCCTAAACTGCAGATAAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192846821 181 + 195804263 CTGTGCAATGAGACACAAAATTATTTTTAAAA-----TTATAAAAATACGCTTAATCTCACTAATAATCTGAGGACTACATGTTAAAATGGCAATGGAATTTCTTTGATG--------ACCAAATATCG----TTGTTTGATCATGTCAAGGGCAAGTGGGCAGGGAG----------------------------------------------------------------------------------------------------AAATGTGTACTCCTAAACTGCAGATAAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880095 181 + 4876863 CTGTGCAATGAGACACAAAATTATTTTTAAAA-----TTATAAAAATACGCTTAATCTCACTAATAATCTGAGGACTACATGTTAAAATAGCAATGGAATTTCTTTGATG--------ACCACATATCG----TTGTTTGATCATGTCAAGGGCAAGTGGGCAGGGAG----------------------------------------------------------------------------------------------------AAATGTGTACTCCTAAACTGCAGATAAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768543 177 + 115148730 ctgtgcaatgagacacaaaattatttttaaaa-----ttataaaaatacgctcaatctcactaataatctgaggactacatgttaaaatagcagtgaaatttctttgatg--------accaaatatca--------ttgatcatgtcaagggcaagtgggcagggag----------------------------------------------------------------------------------------------------aaaggtgtactgctaaactgcagataaaag i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 934999 179 + 2368649 CTGTGCAATGAGACACAAAATTATTTTtaaaa-----ttataaaaatatgctcaacctccctaataatccgaggactacatgttaaaatagcattggaatTTCTTTGATG--------ACCAA--ATCA----TTGTTTGATCATGTCAAAGGCAAGTGGGCAGGGAG----------------------------------------------------------------------------------------------------AAATGTGTACTCCTAAACTGCGGATAAAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189667712 288 - 190850796 CTGTACAGTGATACACAAAATTATTTTTACAA-----Ttataaaaatatgctcaatctcaccaataatctgaggaccacctgttaaaatagcaatggaatttctttgatgatcaaattaccaaatatta----ttgttggataatttcaagtacaagtggg-atgGAGAAAGGTGTATTCCTTGAActtgaactcctgacctcaggtgatccacctgccttggcctccgaagtgctcgattacaggcgtgagccaccgtgccccgccTAAATGTGTACTCCTAAACGGCAGATAAAAA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13160984 189 - 14256875 CTGTACAATCATACACAAAATTACTTTTACAA-----Ttataaaagtatgctcaatctcactaattatctgaggactacctgttaaaatagcaatggaatttctctgatgatcaaattaccaaatatta----ttgttggataatttcaagtgcaagtgggtgtggag----------------------------------------------------------------------------------------------------aaatgcgtactcctaaactgcagataaaaa i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 1052609 189 - 2196201 CTGTACAATGATACACAAAATTACTTTTACAA-----Ctataaaaatatgctcaatctcaccaataatctcaggactacctgttaaaatagcaatggaatttctttgatgatcaaattaccaaatacta----ttgtttgataatttcaagtacaagtgggtatggag----------------------------------------------------------------------------------------------------aaatgtgtactcctaaactgcagataaaaa i cebCap1.NW_016107886v1 C 0 I 1 s aotNan1.NW_018492112v1 3438631 189 - 5030052 CTGTACAATGATACACAAAATTATTTTTACTA-----Ttataaaaatatgatcaatctcaccagtaatctgaggactacctgttaaaagagcaatggaatttctttgatgatcaaattaccaaatatca----ttgtttgataatttcaagtacaagtgggtatggag----------------------------------------------------------------------------------------------------gaatgtgtactcctaaactgcagataaaaa i aotNan1.NW_018492112v1 I 705 I 1 s canFam3.chr16 17000488 178 - 59632846 CTAAACAACGGAACACAAAATTA---TGAAAAAATCCTTATAAAAATATGTGCAATCTCATTGATAAT--GATGATTGCACCATAAAA---CAATG--AGCTCTTTAAAAATC-----ATCAAGTATTATTTATTGTTGGATAATTTTAAGTGCAATTGAGAGTTTAG----------------------------------------------------------------------------------------------------GAATG-----TCCTAAACTAGAGATGAAAG i canFam3.chr16 C 0 I 205 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1499250 4130 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=84556.000000 s hg38.chr4_KI270789v1_alt 179532 24 + 205944 GAGAATTGATAAAACCTCTT----AAAA s panTro5.chr4 192964441 24 + 194502333 GAGAATTGATAAAACCTCTT----AAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847002 24 + 195804263 GAGAATTGATAAAACCTCTT----AAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880276 24 + 4876863 GAGAATTGATAAAACCTCTT----AAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768720 24 + 115148730 gagaattgataaaacctctt----aaag i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935178 24 + 2368649 GAGAATTGATAAAACCTCTT----AAAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668001 28 - 190850796 GAGAGTTGGTAAAACCTCTTTGGGAGAA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13161174 28 - 14256875 aagagttggtaaaacctcttttggagaa i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1052799 28 - 2196201 gagagttggtaaaacctcttttggagaa i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3438821 27 - 5030052 gagagttggc-aaacctcttttggagaa i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 17000871 28 - 59632846 gaaaattggtacaacctctttggaagga i canFam3.chr16 I 205 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1499250 4130 - 2520184 I e mm10.chr8 86651578 528 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=356855.000000 s hg38.chr4_KI270789v1_alt 179556 98 + 205944 -AA-ATGGATTAGATTTAGAAGAATGAACTAT--GTATACACTCTATGA--CTC--AGTTCCATCTGTGAACATGAGTGTCAGAGAAAAGTGTGGCACATCTTCCA s panTro5.chr4 192964465 97 + 194502333 -AA--TGGATTAGATTTAGAAGAATGAAATAT--GTATACACTCTATGA--CTC--GGTTCCATCTGTGAACATGAGTGTCAGAGAAAAGTGCGGCACATCTTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847026 97 + 195804263 -AA--TGGATTAGATTTAGAAGAATGAAATAT--GTATACACTCTATGA--CTC--GGTTCCATCTGTGAACATGAGTGTCAGAGAAAAGTGCGGCACATCTTCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880300 97 + 4876863 -AA--TGGATTAGATTTAGAAGAATGAAATAT--GTATACACTCTATGA--CTC--GGTTCCATCTGTGAACATGAGTGTCAGAGAAAAGTGCGGCACATCTTCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768744 99 + 115148730 -aaaatcgattagatttagaagaatgaaatat--gcatacactctatga--ctc--ggTTCCGTCTGTCAACATGAGTGTCAGAGAAAAGTGCGGCACATCTTCCA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935202 99 + 2368649 -AAAATGGATTAGATTTAGAAGAATGAAATAT--GTATACACTTTATGA--CTC--AGTTCCGTCTGTCAACATGAGTGTCAGAGAACAGTGCAGCACGTCTTCCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668029 101 - 190850796 -AA--TTGATTAGATTTAGAAGAATGAACTAT--GTATACACTCTATGACTCACAGGGTCCCATCTGTCACCATGAGTGTCAGAGACAAGTGCCTCACATCTCCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161202 99 - 14256875 -aa--ctgattagatttagaagaatgaacgat--gtatacactctacga--cacagGGTCCCATCTGTCACCGTGAGTGTCAGAGACAAGTGCCTCATGTCTCCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1052827 99 - 2196201 -aa--ttgattagatttagaagaatgaactat--gtatacactctatga--ctcagGGTCCTGTCTGTCCCTGTGAGTGTCAGAGACAAGTGCCTCACGTCTCCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3438848 99 - 5030052 -aa--ttgattagatttagaagaatgaactat--gtatacactctacga--ctcagGGTCCCATCTGTCACTGTGAGTGTCAGAGACAAGTGCCTCACGTCTCCCA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86652106 94 - 129401213 -AA--TGGATGAAATTTAGAAGAAAGAAATAT----ATTCATTGTTTAA--AAG--TGTTTCATTTACCAGCAGGTAAAATGGAGA-AACTAACCTTCATCTTCAA i mm10.chr8 I 528 C 0 s canFam3.chr16 17000899 100 - 59632846 aaa--ttaattaa--ttagggaaattaaatatgtgtatgtactctgtca--catgggattccatttgccagcatgtacaccagagaaaAGTGTATTACATTTTCAA i canFam3.chr16 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1499250 4130 - 2520184 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=439756.000000 s hg38.chr4_KI270789v1_alt 179654 126 + 205944 GTGGCCAGGTACACAGTGTTGTGCATGACCCTGTGTGGGAGGACCACAAATACATTTTAGTTAAGCACGTtatggaagactatgtagt-attta---gaaagatgggaaggatctatatgtactgacatg s panTro5.chr4 192964562 124 + 194502333 GTGGCCAGGTACACAGTGTTGTGCATGACCCTGTGTGGGAGGACCGCA--TACATTTTAGTTAAGCACGTtatggaagactatgtagt-attta---gaaagatgggaaggatctatatgtactgacatg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847123 124 + 195804263 GTGGCCAGGTACACAGTGTTGTGCATGACCCTGTGTGGGAGGACCACA--TACATTTTAGTTAAGCACGTtatggaagactatgtagt-attta---gaaagatgggaaggatctatatgtactgacatg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880397 126 + 4876863 GTGGCCAGGTACACAGTGTTGTGTGTGACCCTGTGTGggaggacggcaaatacattttagttaagcacgttatggaagactatgtagt-attta---gaaagatgggaaggatctatatgtactgacatg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768843 126 + 115148730 GTGGGCAGGTACACAGGGTTGTGCGTGACCCTGTGTGGGAGGACGGCAAATACATGTTAGTTAAGTACACTGTGCATGACTATTTAGT-GTTTA---GAAAGATGGGAAGGATCTAGATGTACTGACATG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935301 125 + 2368649 ATGGGCAAGTGCACAGGGCTGTGCATGACCGTGTGTGGGAGGACGGTGCATACATGTTAGTTAAGcatgttatggaagactttgcagt-attta---gaaagat-ggaaggatctatatgtactgacatg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668130 126 - 190850796 GGGAGCAGGCACGCAGTGCTTTGCAAGCCCATGTGTAGGGGGATGGCAAAGACATTTCAGGTAAATACAGTATGGAAGAGTTTATAGT-ATGTA---GAAGGATGAGAATGATCTATATGTACTGACATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161301 125 - 14256875 GGG-GCAGGCACGCAGTGCTGCGCCAGCCTATGTGTGGGAGGATGGCAAAGACATTTTAGTTAAGTACAGTGTGGAAGAGTATGTAGC-ATTTA---GAGGGATGGGATGGATCTATGTGTACTGACATG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1052926 125 - 2196201 GGG-GCAGGCACGCAGTGCTATGCATGCCCGTGTGCGGGAGGATGGCAAAGACATTTTAGTTACGTACAGTGTGGAAGAGTATGTAGT-ATTTG---GACGGATGGGGCGGATCTATGTGTACTGACATG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3438947 124 - 5030052 GGGGGCAGGCACACA--GCTGTGCAAGCCCATGTGTGGGAGGATGGCAAAGACATTTCAGTTAAGTACAGTATGGAAGAGTATGTAGT-ATTTA---GAAGGATGGGAAGGATCTATATGTACTGACATG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86652200 109 - 129401213 ATAGTCCAATAGGAAGGGCTCT-----TCTCTCTGTAGAAGAACACTG--TCCATGTTGGCCAAGAAGGCTCTGAAGCATCCTGTAATGGTATA---GCCAG-----------TTATACATAGTGACATG i mm10.chr8 C 0 I 191 s canFam3.chr16 17000999 121 - 59632846 ATAGGCAGACACTGAGTGCTTTGAATGGATCTCTGTAGGAGTATGGTGAATACATTTTAGTCAGATACACCATGGAATATTATGTGGC-ATTTATTTTAAAAATGGGGCAGA--------TACTGATGTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1503380 120 - 2520184 gtgaacAGG-ACATGAGGCTctaaatggctcttcacaggagaacaacaaatacattttggtcacatacactatggaatactttgtggt-a---g---aaagaatggggtaga--tatatgtacttacatg i dasNov3.JH570353 I 4130 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=173844.000000 s hg38.chr4_KI270789v1_alt 179780 38 + 205944 aaGTCATAAAAATTATAAAAATCAAGGTGCAAAATCTG s panTro5.chr4 192964686 38 + 194502333 aaGTCATAACAATTATAAAAATCAAGGTGCAAAATCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847247 38 + 195804263 aaGTCATAACAATTATAAAAATCAAGGTGCAAAATCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880523 38 + 4876863 aaGTCATAACAATTATAAAAATCAAGGTGCAAAATCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112768969 38 + 115148730 AAGTCATAACAAGTATAAAATTCAAGGTGCAAAATCTG i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935426 38 + 2368649 aagtcacaacaattataaaaatcaaggtgcaaaatctg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668256 38 - 190850796 CAGTCATAACACTTATAAAAATTAAGGTGCAAAGTCTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161426 38 - 14256875 AAGTCATTGCAGTTATAAAAATTAAGGTGCAAAGTCTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053051 38 - 2196201 AAGTCATAACAGTTATAAAAATTAAGGTGCAAAGTCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439071 38 - 5030052 AAGTCATAACGGTTATAAAAATTAAGGTGCAAAGTCTG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17001120 38 - 59632846 GATTGATAATAATTTCAAAAATCCAGATGCAAACTATG i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1503500 38 - 2520184 gaataatagtaattataaaagtcaagatacaaaatgtg i dasNov3.JH570353 C 0 I 1 e micMur3.chr14 17550398 1049 - 93316391 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=207511.000000 s hg38.chr4_KI270789v1_alt 179818 74 + 205944 ATGATTTGATGCCATGTGTGCAAAA----CATTCTTTTATATGCATTT-CACAAAAAACAATATTATGTATTTCTCATT------------------- s panTro5.chr4 192964724 74 + 194502333 ATGATTTGATGCCATGTGTGCAAAA----CATTCTTTTATATGCATTT-CACAAAAAACAATATTACGTATTTCTCATT------------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847285 74 + 195804263 ATGATTTGATGCCATGTGTGCAAAA----CATTCTTTTATATGCATTT-CACAAAAAACAATATTACGTATTTCTCATT------------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880561 74 + 4876863 ATGATTTGATGCCATGTGTGCAAAA----CATTCTTTTATATGCGTTT-CACACAAAACAATATTACGTATTTCTCATT------------------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769007 74 + 115148730 ATGATTTGATGCCATGTGTGCAAAA----CATTCTTTTATATACATTT-CACACAAAACAATATTACGTATTTCTCATT------------------- i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935464 74 + 2368649 atgatttgatgccatgtgtgcaaaa----catttttttatatacattt-cacacaaaacaatattatgtatttctCATT------------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668294 60 - 190850796 GTAATTTGATGCCATGTATAC-AAA----CATTC-----TATGCATTT-CACACAAAACA--------TATTTCTAATT------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161464 60 - 14256875 GTAATTTGATGCCATGCATAC-AAA----CATTG-----TATACATTT-CACACAAAACA--------TATTTCTCATT------------------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053089 59 - 2196201 GTAATCTGATGCCATGTATAC-AAA----CATTC-----TATACATTT-CACACAAAACA--------TA-TTCTCATT------------------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439109 60 - 5030052 GTAATTTGATGCCATGTATAC-AAA----CATTC-----TATACATTT-CACACAAAACA--------TATTTCTCATT------------------- i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1503539 97 - 2520184 accatttgata-catgtgtataaaaaaTCCATTCTCTTGCATAAATTCACACACAAAATAATATCATATATTCCTAATGGCCCCTAAATCTGAAGAAC i dasNov3.JH570353 I 1 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11283944 6 - 11315646 I a score=320671.000000 s hg38.chr4_KI270789v1_alt 179892 78 + 205944 ATCCCTAA-AACAAT-TCTAGAGGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA s panTro5.chr4 192964798 78 + 194502333 ATCCCTAA-AACAAT-TCTAGAGGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847359 78 + 195804263 ATCCCTAA-AACAAT-TCTAGAGGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880635 78 + 4876863 ATCCCTGA-AACAAT-TCTAGAGGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769081 78 + 115148730 ATCCCTAA-AACAAT-TCTAGAAGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAGTAA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935538 78 + 2368649 GTCCCTAA-AACAGT-TCTAGAGGATTCATGACATGCTGTTAC----TTGTCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668354 79 - 190850796 GTCCCTAACAAAAAT-TCTAGAGGATTCATGACATACTCTTAC----TTGTCTC------------GGGTGGAC-AAGGATTAGAAATGGTGAATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161524 79 - 14256875 GTCCCTAACAAAAAT-TCTAGAGGATTCACGACATGCTCTTAG----TTACCTC------------AGGTGGAC-AAGGATTAGAAATGGTGAATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053148 79 - 2196201 GTCCCTAACAAAAAT-TCTAGAGGATTCATGACACGCTCTTAC----TTGTCTC------------AGGTGGAC-GAGGATTAGAAACGGTGAATAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439169 79 - 5030052 GTCCCTAACAAAAAT-TCTAGAGGATTCATGACATGCTCTTAC----TTGTCTC------------AGGTGGAC-AAAGATTAGAAATGGTGAATAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11283950 93 - 11315646 ATCCTTAA-AACCAC-CCTTGGGTAGTTGTTA-ACACTGTCCCTATGTGGTTTCAAAACCTTAGAAAGGGGGGT-CAGGATTAGAAATGGTGAATAA i otoGar3.GL873580 I 6 C 0 s dasNov3.JH570353 1503636 77 - 2520184 GTCCCTAA-AATAAGATGTAGAAATTCCATTTCAAAGTGG-------TTTTCTG------------GGGTGAATGGGGGATTAGAAGTGATGAAAAA i dasNov3.JH570353 C 0 I 2465 e micMur3.chr14 17550398 1049 - 93316391 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C a score=3785.000000 s hg38.chr4_KI270789v1_alt 179970 1 + 205944 A s panTro5.chr4 192964876 1 + 194502333 A i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847437 1 + 195804263 A i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880713 1 + 4876863 A i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769159 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935616 1 + 2368649 A i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668433 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161603 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053227 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439248 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11284043 1 - 11315646 A i otoGar3.GL873580 C 0 I 12 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C a score=25308.000000 s hg38.chr4_KI270789v1_alt 179971 8 + 205944 AAAGG--TTA s panTro5.chr4 192964877 8 + 194502333 AAAGG--TTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847438 8 + 195804263 AAAGG--TTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880714 8 + 4876863 AAAGG--TTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769160 8 + 115148730 AAAGG--TAA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935617 10 + 2368649 AAAGGTTTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668434 8 - 190850796 AAAGG--TTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161604 8 - 14256875 AAAGG--TTA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053228 8 - 2196201 GAAGG--TTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439249 8 - 5030052 AAAGG--TTA i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=51473.000000 s hg38.chr4_KI270789v1_alt 179979 22 + 205944 TTTTggcggggcacagtgactt s panTro5.chr4 192964885 22 + 194502333 TTTTggcggggcacagtgactt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847446 22 + 195804263 TTTTggcggggcacagtgactt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880722 22 + 4876863 TTTTggcggggcacagtgactt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769168 22 + 115148730 TTTTggcctggtgcagtggctt i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 935627 22 + 2368649 TTTTGGCTCAGGgcggtggctt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668442 22 - 190850796 TTTTgacccggcacagtggctc i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1053236 22 - 2196201 TTTTggcccggcacggtggctc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439257 22 - 5030052 TTTTggccaggcactgtggctc i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e macFas5.chr5 187990724 0 + 189454096 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=5655.000000 s hg38.chr4_KI270789v1_alt 180001 2 + 205944 at s panTro5.chr4 192964907 2 + 194502333 at i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847468 2 + 195804263 at i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880744 2 + 4876863 at i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769190 2 + 115148730 at i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187990724 2 + 189454096 ac i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 935649 2 + 2368649 at i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668464 2 - 190850796 at i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1053258 2 - 2196201 ac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439279 2 - 5030052 ac i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e chlSab2.chr7 134368541 0 + 135778131 C e cerAty1.NW_012001672v1 3411525 0 + 4669795 C e macNem1.NW_012013133v1 24382041 0 - 25927173 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=5159.000000 s hg38.chr4_KI270789v1_alt 180003 1 + 205944 g s panTro5.chr4 192964909 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847470 1 + 195804263 g i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880746 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769192 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187990726 1 + 189454096 a i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411525 1 + 4669795 g i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368541 1 + 135778131 g i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 935651 1 + 2368649 g i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668466 1 - 190850796 g i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1053260 1 - 2196201 g i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439281 1 - 5030052 g i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e rheMac8.chr5 189047839 0 + 190429646 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=259054.000000 s hg38.chr4_KI270789v1_alt 180004 37 + 205944 cctgtaatcccagcactttgggaggccgaggtgggtg s panTro5.chr4 192964910 37 + 194502333 cctgtaatcccagcactttgggaggccgaggtgggtg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847471 37 + 195804263 cctgtaatcccagcactttgggaggccgaggtgggtg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880747 37 + 4876863 cctgtaatcccagcactttgggaggccgaggtgggtg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769193 37 + 115148730 cctgtaatcccagcactttgggaggccaaggtgggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047839 37 + 190429646 cctgtaatcccagcactttgggaggccgaggtgggcg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990727 37 + 189454096 cctgtaatcccagcactttgggaggctgaggtgggcg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411526 37 + 4669795 cctgcaatcacagcactttgggaggccgaggtgggcg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368542 37 + 135778131 cctgcaatcccagcactttgggaggccgaggtgggcg i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 935652 37 + 2368649 cctgtaatcccagcactttgggaggctaaggtgggtg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668467 37 - 190850796 cctgtaatcccagcactttgggaggctgaggtgggtg i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1053261 37 - 2196201 cctgtagtcccagcactttgggaggctgaggtgggcg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439282 37 - 5030052 cctgtaatcccagcactttgggaggctgaggtgggtg i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=316142.000000 s hg38.chr4_KI270789v1_alt 180041 67 + 205944 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaa s panTro5.chr4 192964947 67 + 194502333 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847508 67 + 195804263 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880784 67 + 4876863 gatcactggaggtcaggagttcgagaccagcctgtccaacatggtgaaaccccgtctctactaaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769230 67 + 115148730 gatcactggaggtcaggagttcaagatcagcctgaccaacatggtgaaaccctgtctctactaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047876 67 + 190429646 gatcactggaagtcaggagttcgagaccagcctgaccaacatggtgaaaccacgtctctactaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990764 67 + 189454096 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccacgtctctactaaaaa i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411563 67 + 4669795 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccacgtctctactaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368579 67 + 135778131 gatcactggaggtcaggagttcgagaccagcctgaacaacatggtgaaaccacgtctctactaaaaa i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 935689 67 + 2368649 gatcactgtaggtcaggagttcaagaccagcctgaccaagatggtgaaaccacatctctactaaaaa i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1053298 67 - 2196201 catcacttgaggtcaggagtttgagagcagcctgaccaacatggtaaaacttggtctctactaaaaa i cebCap1.NW_016107886v1 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=114925.000000 s hg38.chr4_KI270789v1_alt 180108 31 + 205944 tacaaaaaactagccaggcatggtggtgcgt s panTro5.chr4 192965014 31 + 194502333 tacaaaaaactagccaggcatggtggtgcat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847575 31 + 195804263 tacaaaaaactagccaggcatggtggtgcgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880851 31 + 4876863 tacaaaaaactagccaggcatggtggtgcgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769297 31 + 115148730 tacaaaaaattagccaggcgtagtggtgcat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047943 31 + 190429646 tataaaaaattagccaagcatggtagtgcgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990831 31 + 189454096 tataaaaaattagccaagcatggtagtgcgt i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411630 31 + 4669795 tataaaaaattagccaagcatggtagtgcgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368646 31 + 135778131 tataaaaaattagccaagcatggtagtgcgt i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 935756 31 + 2368649 tacaaaaaattagccaagcatggtggtgcat i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e saiBol1.JH378165 13161612 0 - 14256875 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=3600.000000 s hg38.chr4_KI270789v1_alt 180139 1 + 205944 g s panTro5.chr4 192965045 1 + 194502333 g i panTro5.chr4 C 0 C 0 s panPan2.chr4 192847606 1 + 195804263 g i panPan2.chr4 C 0 I 3189 s gorGor5.CYUI01015356v1 3880882 1 + 4876863 g i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769328 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047974 1 + 190429646 g i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990862 1 + 189454096 g i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411661 1 + 4669795 g i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368677 1 + 135778131 g i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e saiBol1.JH378165 13161612 0 - 14256875 C e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e otoGar3.GL873580 11284044 12 - 11315646 I a score=309377.000000 s hg38.chr4_KI270789v1_alt 180140 154 + 205944 cctgtaat-ctagcgactcgggaggctgaggcaagagaattgcttgaacccgggaggcggaggttgcagtgttgcagtgagccgagattgcatcattgcattccagcgtgggcaacaagagtgaaactctgtctc--------aaaaaaaaaaaa-------------GAGGTTAC s panTro5.chr4 192965046 156 + 194502333 cctgtaat-ctagcgactcgggaggctgaggcaagagaattgcttgaacctgggaggcggaggttgcagtgttgcagtgagccgagattgcatcattgcattccagcgtgggcaacaagagtgaaactctgtctc--------aaaaaaaaaaaa-----------aaGAGGTTAC i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3880883 154 + 4876863 cctgtaat-ctagcgactcgggaggctgaggcaagagaattgcttgaacccgggaggcggaggttgcagtgttgcagggagccgagattgcatcgttgcactccagcgtgggcaacaagagtgaaactctgtctc--------aaaaaaaaaaGG-------------GGGGTTAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769329 160 + 115148730 cctgtaatcctagcaactcgggaggctgaggcaagacaactgcttgaacccgggaggcagaggttgcagt--------gagctgagattccatcattgtactccagcctgggcaacaagagtgaaactctgtttc--------aaaaaaaaaaaaaaaaaaaaaaaaaaaGGTTAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189047975 151 + 190429646 cctgtaatcctagctattcgggaggctgaggcaggagaattgcttgaacctgggaggcggaagttgcagt--------gagccgagattgcaccattgca-tccagcccgggcaacaagagtgaaactctgtctc---aaaaaaaaaaaaaaaaa-------------aaGGTTAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187990863 154 + 189454096 cctgtaatcctagctattcgggaggctgaggcaggagaattgcttgaacctgggaggcggaagttgcagt--------gagccgagattgcaccattgca-tccagcccgggcaacaagagtgaaactctgtctcaaaaaaaaaaaaaaaaaaaa-------------aaGGTTAC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411662 146 + 4669795 cctgtaattctagctactcgggaggctgaggcaagagaattgcttgaacccaggaggcggaggttgcagt--------gagccaagactgcaccattgca-tccagcctgggcaacaagagcgaaactctgtctc--------aaaaaaaaaaaa-------------aaGGTTAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368678 150 + 135778131 cctgtaatcctagttactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttgcagt--------gagccaagatagcaccattgca-tccagcctgggcaacaagagcgaaactctgtctt----aaaaaaaaaaaaaaaa-------------aaGGTTAC i chlSab2.chr7 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e saiBol1.JH378165 13161612 0 - 14256875 C e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=41757.000000 s hg38.chr4_KI270789v1_alt 180294 14 + 205944 TTTTgccaggcaca s panTro5.chr4 192965202 14 + 194502333 TTTTgccaggcaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881037 14 + 4876863 TTTTgccaggcacg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769489 14 + 115148730 TTTTgccaggcaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048126 14 + 190429646 TTTTgccagacacg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991017 14 + 189454096 TTTTgccagacacg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3411808 14 + 4669795 TTTTgccagacacg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368828 14 + 135778131 TTTTgccagacacg i chlSab2.chr7 C 0 C 0 s saiBol1.JH378165 13161612 14 - 14256875 TTTggccaggcacg i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e macNem1.NW_012013133v1 24382041 0 - 25927173 C e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=171369.000000 s hg38.chr4_KI270789v1_alt 180308 47 + 205944 gtggctcacacccgtaatcccagcactttcggaggacgaggtgggta s panTro5.chr4 192965216 47 + 194502333 gtggctcacacctgtaatcccagcactttcggaggacgaggtgggtg i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881051 47 + 4876863 gtggctcacacctgtaatcccagcacttttggaggacgaggtgggta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769503 47 + 115148730 gtggctaacacctgtaattgcagcactttggaaggccaaggtgggtg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048140 47 + 190429646 gtggttcacgcctgtaatcccagcactttgggaggccgaggtgggtg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991031 47 + 189454096 gtggttcacgcctgtaatcccagcactttgggaggccgaggtgggtg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382041 47 - 25927173 gtggctcacacctgtaatcccagcactttgggaggccgaggtgggcg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411822 47 + 4669795 gtggttcacgcctataatcccagcactttgggaggccgaggtgggtg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368842 47 + 135778131 gtggttcacgcctgtaatcccagcactttgggaggccgaggtgggtg i chlSab2.chr7 C 0 C 0 s saiBol1.JH378165 13161626 47 - 14256875 gtggctcacgcctgtaatcccagcactttgggaggctgaggtagttg i saiBol1.JH378165 C 0 C 0 e calJac3.chr3 189668504 0 - 190850796 C e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e aotNan1.NW_018492112v1 3439319 0 - 5030052 C e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=367639.000000 s hg38.chr4_KI270789v1_alt 180355 67 + 205944 gatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaag s panTro5.chr4 192965263 67 + 194502333 gatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaag i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881098 67 + 4876863 gatcacttgaggtcaggagtttgagaccagcctggccaacatgctgaaaccccatctctactaaaag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769550 67 + 115148730 gatcacttgaggtcaggagttccagaccagcctggccaacatggtgaaaccctgtctctgctaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048187 67 + 190429646 gatcacttgaggtcagaagttcgagaccagcttggccaacatggtgaaaccccatctctactaaaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991078 67 + 189454096 gatcacttgaggtcagaagttcgagaccagcttggccaacatggtgaaaccccatctctactaaaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382088 67 - 25927173 gatcactggaggtcaggagttcgagaccagcctgaccaacatggtgaaaccacgtctctactaaaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411869 67 + 4669795 gatcacttgaggtcagaagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368889 67 + 135778131 gatcacttgaggtcagaagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189668504 67 - 190850796 gatcacttgaggtcaggagtttgagaccagcctggccaacatggtaaaacttggtctctattaaaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161673 67 - 14256875 gatcacttgaggtcaggagtttgagaccaggctggccaacatggtaaaacttggtctctactaaaaa i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3439319 67 - 5030052 gattacttgaggtcaggagtttgagaccagcctggccaacatggtaaaacttggtctctactaaaaa i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1053365 0 - 2196201 C e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=143793.000000 s hg38.chr4_KI270789v1_alt 180422 30 + 205944 tacaaaaat-tagccaggtgtggtggcgtgc s panTro5.chr4 192965330 30 + 194502333 tacaaaaat-tagccaggtgtggtggcgtgt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881165 30 + 4876863 tacaaaact-tagccaggtgtggtggcgtgc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769617 30 + 115148730 tacaaaaat-tagccaggtgtggtggcgtgc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048254 30 + 190429646 cacaaaaag-tagccagatgtggtggcgtgc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991145 30 + 189454096 cacaaaaag-tagccagatgtggtggcgtgc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382155 31 - 25927173 tataaaaaattagccaagcatggtagtgcgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411936 30 + 4669795 cacaaaaag-tagccagatgtggtggcgtgc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368956 30 + 135778131 cacaaaaag-tagccagatgtggtggcgtgc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 189668571 30 - 190850796 tacaaaact-tagctgggcgtggtggcacat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161740 30 - 14256875 tacagaact-tagctgggcatggcagtacgt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053365 30 - 2196201 tacagaact-tagctgggcgtggcggcacgt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439386 30 - 5030052 tacaaaact-tagctgggcatggtggcacgc i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e colAng1.NW_012116221v1 935787 0 + 2368649 C e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=144724.000000 s hg38.chr4_KI270789v1_alt 180452 20 + 205944 gcctgtaattccagttactt s panTro5.chr4 192965360 20 + 194502333 gcctgtaattccagttactt i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881195 20 + 4876863 gcctgtaattccagttactc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769647 20 + 115148730 gcctgtaattccagttactt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048284 20 + 190429646 acctgtaattccagttactc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991175 20 + 189454096 acctgtaattccagttactc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382186 20 - 25927173 gcctgtaatcctagctattc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3411966 20 + 4669795 acctgtaattccagttactc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134368986 20 + 135778131 acctgtaatcccagttactc i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 935787 20 + 2368649 gcctgtaatcccagctactc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668601 20 - 190850796 gcctgtaatcccagttactt i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161770 20 - 14256875 gcctgtaatcccagttactt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053395 20 - 2196201 gcctgtgatccccgttactt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439416 20 - 5030052 gcctgtaatcccagttactt i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e manLeu1.NW_012102221v1 2829000 6778 - 2847728 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=589006.000000 s hg38.chr4_KI270789v1_alt 180472 73 + 205944 gggaggctgaggcaggagaattgcttgagccctagaggcggaggttgcagtgagccgagatcaagacactgca s panTro5.chr4 192965380 73 + 194502333 gggaggctgaggcaggagaattgcttgagccctagaggtggaggttgcagtgagccgagatcaagacactgca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881215 72 + 4876863 gggaggctgaggcaggagaattgcttgagccctagaggcgga-gttgcagtgagccgagatcaagacactgca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769667 73 + 115148730 gggaggctgaggcaggagaattgcttgagtcctagaggcggaggttgcagtgagccaagatcaagacactgca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048304 73 + 190429646 gggaggctgaggcaggagaactgcttgagtcctagaggtggaggttgcagtgagccgagatcaagacactgca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991195 73 + 189454096 gggaggctgaggcaggagaactgcttgagtcctagaggtggaggttgcagtgagccgagatcaagacactgca i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382206 73 - 25927173 gggaggctgaggcaggagaattgcttgaacctgggaggcggaagttgcagtgagccgagattgcaccattgca i macNem1.NW_012013133v1 C 0 I 17 s cerAty1.NW_012001672v1 3411986 73 + 4669795 gggaggctgaggcaggagaattgcttgagtcctagaggtggaggttgcagtgagccgagatcaagacactgca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369006 73 + 135778131 gggaggctgaggcaggagaattgcttgagtcctagaggtggaggttgcagtgagccgagatcaagacactgcg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2835778 73 - 2847728 gggaggctgaggcaggagaattgcttgagtcctagaggtggaggttgctgtgggccaagatcaagacactgca i manLeu1.NW_012102221v1 I 6778 C 0 s colAng1.NW_012116221v1 935807 73 + 2368649 gggaggctgaggcaggagaattgcttgagtcctagaggtggaggttacagtgagccgagatcaagacactgca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668621 73 - 190850796 gagaggctgaaacaggagaactgcttcatcccaggaggcagaggttgcagtgagccaagatggagtcactgca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161790 73 - 14256875 gagaggctgaaacaggagaactgcttcagcccaggaggcagaggttgcagtgagccgagattgagcccctgca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053415 72 - 2196201 gagaggctgaaacaggagaactgcttcagcccagga-gcagaggctgcagtgagccgagatccagccactgca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439436 73 - 5030052 gagaggctgaaacaggagaactgcttcagcccaggaggcagaggttgcagtgagctgagatcgagccaccaca i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=94061.000000 s hg38.chr4_KI270789v1_alt 180545 17 + 205944 ctccaggcccagagaca s panTro5.chr4 192965453 17 + 194502333 ctccaggcccagagaca i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881287 17 + 4876863 ctccaggcccagagaca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769740 17 + 115148730 ctccaggcccagagaca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048377 17 + 190429646 ctccaggccctgagaca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991268 17 + 189454096 ctccaggccctgagaca i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3412059 17 + 4669795 ctccaggccctgagaca i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369079 17 + 135778131 ctccaggccctgagaca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2835851 17 - 2847728 ctccaggccctgagaca i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 935880 17 + 2368649 ctccaggccctgagaca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668694 17 - 190850796 gtccagaccaggcaaca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161863 17 - 14256875 ggccagcccaggcaaca i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053487 17 - 2196201 gtccagcccagccaaca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439509 17 - 5030052 ctccagcccaggcaaca i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e macNem1.NW_012013133v1 24382279 17 - 25927173 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=423247.000000 s hg38.chr4_KI270789v1_alt 180562 61 + 205944 gagagagaccccgtctc----aaaa-aaaaaaaaa---aGTTA-TTTTTCACATGGTAGTTCATTAAAAT s panTro5.chr4 192965470 60 + 194502333 gagagagaccccgtctc----aaaa-aaaaaaaaa----GTTA-TTTTTCACATGGTAGTTCATTAAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881304 61 + 4876863 gagagagaccccgtctc----aaaa-aaaaaaaaa---aGTTA-TTTTTCACATGGTAGTTCATTAAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769757 64 + 115148730 gagagagaccccatctc----aaaa-aaaaaaaaaaaaaGTTA-TTTTTCGCATGGTAGTTCATTAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048394 60 + 190429646 ----gagaccccgtctc----aaaa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991285 60 + 189454096 ----gagaccccgtctc----aaaa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382296 63 - 25927173 gagtgaaactctgtctc-----aaa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i macNem1.NW_012013133v1 I 17 C 0 s cerAty1.NW_012001672v1 3412076 62 + 4669795 gagagagaccccgtttc------aa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369096 63 + 135778131 gagagagaccccgtct-----ggaa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2835868 68 - 2847728 gagagagaccccgtttcaaaaaaaa-aaaaaaaaaaaaaGTTA-TTTTTCACATGGTAGTTCATTAAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 935897 61 + 2368649 gagagagacctcgtctc---------aaaaaaaaaaaaaGTTATTTTTTCACATGGTAGTTCATTAAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668711 65 - 190850796 gagcgagactccattac----aaagcaaaacaaaaaaaCGTTA-TTTTTCACGTGGTAATTCTTTAAAAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161880 65 - 14256875 gagtgagactccattac----aaaacaaaacaaaaCAAGGTTA-TTTTTCGCATGATAATTCTTTAAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053504 65 - 2196201 gagcgaggctccattac----aaaacaaaacaaaaaaaGGTTA-TTTTTCACATGGTAATTCTCTAAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439526 65 - 5030052 gagcgagactccattac----aaaacaaaacaaaaaaaCGTTA-TTTTTCACATGGTAATTCTTTAAAAA i aotNan1.NW_018492112v1 C 0 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e panPan2.chr4 192847607 3189 + 195804263 I e otoGar3.GL873580 11284044 12 - 11315646 I a score=588940.000000 s hg38.chr4_KI270789v1_alt 180623 81 + 205944 TTTTTAAGTATTAAGCTTTATTTATCAACTGATTAATATTTTTTCCTAATGAAACAAAA------------TTTTACTTTTTT-TAAAAAG-TCT s panTro5.chr4 192965530 81 + 194502333 TTTTTAAGTATTAAGCTTTATTTATCAACTGATTAATATTTTTTCCTAATGAAACAAAA------------TTTTACTTTTTT-TAAAAAG-TCT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881365 81 + 4876863 TTTTTAAGTATTAAGTTTTATTTATCAACTGATTAATATTTTTTCCTAGTGAAACAAAA------------TTTTACTTTTTT-TAAAAAG-TCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769821 81 + 115148730 TTTTTAAGTACTAAGCTTTATTTATCAACTGATTAATATTTTTTCCTAATGAAACAAAA------------TTTTACTTTTTT-TTAAAAG-TCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048454 77 + 190429646 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTCTTT-TTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991345 78 + 189454096 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTCTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382359 78 - 25927173 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTCTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412138 78 + 4669795 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTCTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369159 78 + 135778131 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTCTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2835936 78 - 2847728 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTCTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-TAAAAAATTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 935958 78 + 2368649 TTTTTAAGTATTAAGC----TTTATCAACTGATTATTATTTTTTCCTAATGAAACAAAA------------TTTTCCTTTTTT-AAAAAAATTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668776 80 - 190850796 TTTTAAAGTATTAAGCTTTATTTCTCAACTGATTAATATTTTTTCCTACTGAAACAAAA------------TTTTACTTTTT--TTTTAAA-TCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13161945 79 - 14256875 TTTTAAAGTATTAAGCTTTATTTCTCAACTGATTAATATTTTTTCCTAATGAAACAAAA------------TTTTAC-TTTT--AAAAAAA-TCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053569 82 - 2196201 TTTTAAAGTATTAAGCTTTATTTCTCAACCGATTAATTTTTTTTCCTAATGAAACAAAA------------TTTTACTTTTTTAAAAAAAA-TCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439591 81 - 5030052 TTTTAAAGTATTAAGCTGTATTTCTCAACTGATTAATATTTTTTCCTAATGAAACAAAA------------TTTTACTTTTTT-TTTTAAA-TAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11284056 87 - 11315646 TTTTTAAGTCTTAAGCTTTATTTTTCAACTGATT-TGAGTTTTTCACAATGGAACAAAACTTAATTTTTGGTTTTTATTTTTT-AATTA------ i otoGar3.GL873580 I 12 C 0 e micMur3.chr14 17550398 1049 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e panPan2.chr4 192847607 3189 + 195804263 I a score=1744304.000000 s hg38.chr4_KI270789v1_alt 180704 177 + 205944 CTTTGTACTATTCAAATACTGAATATACAAACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTGGGTGACTATCTCACGGAAGTCTAGCAGGATTTGAGATTTCAATGAGAAATATTCTGCAAAACT-TTAGAGTTGCTGACAAAAGGTAA--AAAA s panTro5.chr4 192965611 177 + 194502333 CTTTGTACTATTCAAATACTGAATATACAAACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTGGGTGACTATCTCACGGAAGTCTAGCAGGATTTGAGATTTCAATGAGAAATATTCTGCAAAACT-TTAGAGTTGCTGACAAAAGGTAA--AAAA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881446 177 + 4876863 CTTTGTACTATTCAAATACTGAATATACAGACATTAGCTAGCGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTGGCTGGGTGACTATCTCACAGAAGTCTAGCAGGATTTGAGATTTCAATGAGAAATATTCTGCAAAACT-TTAGGGTTGCTGACAAAAGGTAA--AAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112769902 177 + 115148730 CTTTGTACTGTTCACGTACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGTCTAGCAGGATTCGAGATTTCAATGAGAAATGTTCTGCAAAACT-TTAGGGTTGCTGACAAAAGTTAA--AAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048531 178 + 190429646 CTTTTTACTGTTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTAGGTGACTGTCTCACAGAAGTCTAGCAGGATTCGAGATTTCAATGAGAAATATTCTGCAAAACTTTTAGGGTTGCTGAGAAAAGGTAA--AAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991423 178 + 189454096 CTTTTTACTGTTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGTCTAGCAGGATTCGAGATTTCAATGAGAAATATTCTGCAAAACTTTTAGGGTTGCTGAGAAAAGGTAA--AAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382437 178 - 25927173 CTTTTTACTGTTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATgaatactgagctgatagccaggctta---cttgctagctaggtgactatctcacagaagtctagcagGATTCGAGATTTCAATGAGAAATATTCTGCAAAACTTTTAGGGTTGCTGAGAAAAGGTAA--AAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412216 178 + 4669795 CTTTTTACTATTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCCGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGGCTAGCAGGATTCGAGATTTCAATGAGAAATATTCTGCAAAACTTTTAGGGTTGCTGAGAAAAGGTAA--AAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369237 165 + 135778131 CTTTTTACTATTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGGAGTCTAGCAGGATTCGAGATTTCAATGAGAAATA-------------TCAGGGTTGCTGAGAAAAGGTAA--AAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836014 177 - 2847728 CTTTTTACTATTCATATACTGAATATACAGACATTAGCTAGTGAAGGAATGAATACTGAGCTGATAGCCCGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGGCTAGC-GGATTCGAGATTTCAGTGAGAAATATTCTGCAAAACTTTTAGGGTTGCTGAGAAAAGGTAA--AAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936036 178 + 2368649 CTTTTTACTATTCATATACTGAATATACAGACATTAGCTAGTGAAGGAACAAATACTGAGCTGATAGCCAGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGTCTAGCAGGATTCGAGATTTCAATGAGAAATATTCTGCTAAACTTTTAGGGTTGCTGAGAAAAGGTTA--AAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189668856 173 - 190850796 CTTTTCACTATTCAAATACTGAATATACAGACATTAACGAGTAAAGGAATGAAGACTGAGCTGATAGCCGGGCTTG---CTTGCTAGCTAGGTGAC--TCTCACAGAAGTCTAGCAGGGTTCAAGATCTCAATGAGAAATATTCTGCAAAAT--TTAGGGTTGCTGACAAAAGGCAA---AAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162024 177 - 14256875 CTTTTCACTATTTAAATACCGAACATACAGACATTAACGAGAGAAGGAATGAATACTGAGCTGATGGCCGGGCTTA---CTTGCTAGCTAGGTGACTATCTCACAGAAGTCTAGCGGGATTCAAGATCTCAATGAGAAATATTCTGCAAAAT--TTAGGATTGCTGACAAAAGGCAA-AGAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053651 178 - 2196201 CTTTTCACTCTTCAAATACCGAACATACAAACATTAATGAGTAAAGGAATGAATACCGAGCTGATCGCTGGGCTTC---CTTGCTGGCTACATGACTATCTCACAGAAGTCCAGCGGGATTCAAGATCTCAGTGAGAAATATTCTGCAAAAT--TTAGGGTTGCTGACAAAAGGCAAAAAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439672 177 - 5030052 CTTTTCACTATTCGAATACTGAATATACAGACATTAACAAGTAAagaaatgaatactgagctgatagccaggctta---cttgctagctaggtgactatctcacagaagtctagcagGATTCAAGATCTCAATGAGAAATATTCTGCAAAAT--TTAGGGTTGCTGACAAAAGGCAA-AAAAA i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17551447 177 - 93316391 CTTTTTACTATTCAAATACTGGATATACAGACACTAAATAGTGAAGGAATgaacactgagctgatagctaggctta---tttgttagctaagtgaccatctcacagaagtctagcaggattcaagatttaaatAGGAAATTTTCCAAAAAACT-TCAGGGCTGCTGAAAAAAGATGA--AAAA i micMur3.chr14 I 1049 I 272 s otoGar3.GL873580 11284143 176 - 11315646 CTTTTTACTATTCAAATACTGGCTATCCTGACATTTATCAGTGGAGAAATGAATACTGACCTGGTAGCTAGGCATAATTATTGTTAGCTAAATGCCATTCTTATAGACATCTAGTAGAATTCAAGATAGAAATAAGACATTTTCCACGAAACT-TTAGGGTTGGTGACAAAAGATGA------ i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e panPan2.chr4 192847607 3189 + 195804263 I a score=1435007.000000 s hg38.chr4_KI270789v1_alt 180881 191 + 205944 -AAA--ATGTGCTTATTAATAAAATAAGGCCAAGTAAT------GAAAAATGTATTTATTAAATGAAGGCCAGGGAACAC--------------TGTGTGAGGCTTCGTGG---------GTGTGAGTACTTGCTACTGGACTGTCATTTCTCAGTTATACAGAGTGAACCAGAGGTAGA-TAGGGAATAGTTATTGTCAGCAGGATCTATAGAAATAGCAACA s panTro5.chr4 192965788 190 + 194502333 -AAA---TGTGCTTATTAATAAAATAAGGCCAAGTAAT------GAAAAATGTATTTATTAAATGAAGGCCAGGGAACAC--------------TGTGTGAGGCTGCGTGG---------GTGTGAGTACTTGCTACTGGACTGTCATTTCTCAGTTATACAGAGTGAACCAGAGGTAGA-TAGGGAAGAGTTATTGTCAGCAGGATCTATAGAAATAGCTACA i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881623 190 + 4876863 -AAAAAATGTGCTTATT-----AATAAGGCCAAGTAAT------GAAAAATGTATTTATTAAATGAAGGCCAGGGAACACTG------------TGTGTGAGGCTGCATGG---------GTGTGAGTACTTGCTACTGGACTGTCATTTCTCGGTTATACAGAGTGAACCAGATGTAGA-TAGGGAAGAGTTATTGTCAGCAGGATCTATAGAAATAGCAACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770079 184 + 115148730 -------CGTGTTTATT-----AATAAGGCCAAGTAAT------GAAAAATGTATTTATTGAATGAAGGCCAGGGAACACTG------------TGTGTGAGGCTGTGTGG---------GTGTGAGTACTTGCTCCTGGACTGTCATTTCTCAATTATACAGAGTGAACCAGATGTAGA-TAGGGAAGAGTTATTGTCAGCAGGATCTGTAGAAATAGCAACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048709 185 + 190429646 -AAA---TGTGTTTATT-----AATAAGGCCAAGTAAT------GAAAAAAGTATGTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGAGACTGTGTGA---------GTGCGAGTACTTGCTTCTATCCTGTCATTTCTCAATTATACAGAGTGAACCAGACGTAGA-GAGGGAAGAGTTATTGTCAGCAGGATCTGCAGAAATCGCAACA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991601 185 + 189454096 -AAA---TGTGTTTATT-----AATAAGGCCAAGTAAT------GAAAAAAGTATGTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGAGACTGTGTGA---------GTGCGAGTACTCGCTTCTATCCTGTCATTTCTCAATTATACAGAGTGAACCAGACGTAGA-GAGGGAAGAGTTATTGTCAGCAGGATCTGCAGAAATCGCAACA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382615 185 - 25927173 -AAA---TGTGTTTATT-----AATAAGGCCAAGAAAT------GAAAAAAGTATGTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGAGACTGTGTGA---------GTGCGAGTACTTGCTTCTATCCTGTCATTTCTCAATTATACAGAGTGAACCAGACGTAGA-GAGGGAAGAGTTATTGTCAGCAGGATCTGCAGAAATCGCAACA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412394 185 + 4669795 -AAA---TGGGTTTATT-----AGTAAGGCCGAGTAAT------GAAAAAAGTATGTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGAGACTGTGTGG---------GTGCGAGTACTTGCTTCTATCCTGTCATTTCTCAATTATACAGAGTGAACCAGACGTAGA-GAGGGAAGAGTTGTCGTCAGTAGGATCTGCAGAAATCGCAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369402 185 + 135778131 -AAA---TGTGTTTATT-----AATAAGGCCAAGTAAT------GAATAAAGTAGGTATTAAATGAGGGCCAGGGAACAC--------------GTTGTGAGACTGTGTGG---------GTGTGAGTACTTGCTTCTATCCTGTCATTTCTCAATTATACAGAGTGAACCAGACGTAGA-GAGGGAAGAGTTATTGTCAGCAGGATCTGCAGAAATCGCAGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836191 185 - 2847728 -AAA---TGTGTTTATT-----AATAAGGCCAAGTAAT------GAAAAAAGTATGTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGAGACTGTGTGG---------GTGCGAGTACTTGCTTCTATCCTGTCATTTCTCAATTATACAGCGTGAACCAGACGTAGA-GAGGGAAGAGTTATCGTCAGTAGGATCTGCAGAAATCGCAACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936214 184 + 2368649 -AAA----GTGTTTATT-----AATAAGGCCAAGTAAT------GAAAAAAGTATTTATTAAATGAGGGCCAGGGAACAC--------------GGTGTGCGACTGTGTGG---------GTGCGAGTACTTGCTTCTGGCCTGTCATTTCTCAATTACAGAGAGTGAACCAGATGTAGA-GAGGGAGGAGTTGTTGTCAGCAGGATCTGTAGAAATCGCAACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669029 198 - 190850796 -AAA---TGTGTTTATT-----CCTAAGGCCAAGTATTTATTTGGAAAAGTGTATTTATTAAATAAGGGCCAGGGAGCACTG----------TCTGTGTGAGGCTGTGTGGGTGTGTGGCGTGTGAGTACTTGCTCCTGGATTGTCATTTCTAAATTACACAGTGTGAATCAGATGTAGA-GAGGGACAGATTATTGTCAGCAGGATCTGTGGAA------ACA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162201 198 - 14256875 -AAA---TGTGTTTATT-----CATAAGGCTGAGTAAT------GAAAAGTGTATTTATTAAATAAGGGCCAGGGAGCACTC----------TCTGTGTGAGGCTGTGTGGGTGTGTGGTGTGTGAGTACTTGCTCCTGGATTGTCATTTCTAAATTACACAGTGTGAACCAGATGTAGA-AAGGGAAGAATTATTGTCAGCAGGATCTGTGGAAACAGCGACA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1053829 198 - 2196201 -AAA---AGTGTTTATT-----CATAAGGCCAAGTAAT------GAAAAGTGTATTTATTAAATAAGGGCCAGGGAGCACTC----------TCTCTGTGAGGCTGTGAGGGCGTGTGGCGTGTGAGTACTTGCTCCTGGGCTGTCATTTCTAAATTACGCAGTGTGAACCAGATGTAGA-GAGGGAAGAATTATTGTCAGCAGGATCTGTGGAAACAGCGACA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3439849 198 - 5030052 -AAA---AATGTTTATT-----CATAAGGCCAAGTAAT------GAAAAGTGTATTTATTAAATAAGGGCCAGGGAGCACTC----------TCTTtgtgaggctgtgtgggtgtgtggtgtgtgagtACTTGCTCCTGGATTGTCATTTCTAAATTACACAGTGTGAACCAGATGTAGA-GAGGGAAGAATTATTGTCAGCAGGATCTGTGGAAACAGTGACA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11284319 177 - 11315646 AAAA---CTTGCTTATT-----GATAAGACCAAGTAAT------CAACAATGTATTTATAAAGT-AAGGCCAGTGATCACTCCACATAAGGGTATGTGTGTGGGTGTGCGG--------CATATGAGTCCTTGCTCCCAAGTTGTTGTTTATAAATTCTAGAGCATAAGACAGATGCACAGGATGGATGAATTATTGTTA------------------------ i otoGar3.GL873580 C 0 C 0 e micMur3.chr14 17551624 272 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e mm10.chr8 86652309 191 - 129401213 I e panPan2.chr4 192847607 3189 + 195804263 I a score=594389.000000 s hg38.chr4_KI270789v1_alt 181072 59 + 205944 GTGGTGAGGAGTAGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat s panTro5.chr4 192965978 59 + 194502333 GTGGTGAGGAGTAGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881813 59 + 4876863 GTGGTGAGGAGTAGAAGGATGTTGGATCAAATAAGATAATGCAGataacaccatagaat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770263 59 + 115148730 ATGGTGAGGAGTAGAAAGATGTTGGATCAAATAAGATAGTGCAGataacaccattgaat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048894 59 + 190429646 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991786 59 + 189454096 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382800 59 - 25927173 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412579 59 + 4669795 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369587 59 + 135778131 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836376 59 - 2847728 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccatagaat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936398 59 + 2368649 GTGGTGAGGAGTGGAAGGATGTTGGATCAAATGAGACAGTGCAGataacaccatagaat i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669227 59 - 190850796 GTGGTGAGAAATAGAAGGATGCTGGATCAAGTAAGATAGTGCCGATAACAACGTAAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162399 59 - 14256875 GTGGTGAGAAATAGAAGGACGTTGGATCAAATAAGATAGTGcatataataccataaaat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054027 59 - 2196201 GGGGTGAGAAACAGAAGGATGTTGGATCAAATAAGATGGTGCAGATAACACCAAAAAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440047 59 - 5030052 GTGGTGAGAAATAGAAGGATGTTGGATCAAATAAGATAGTGCAGataacaccataaaat i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11284496 54 - 11315646 -----GATAAGTAGAAAGATGCTGGATCAAATAAGATAATGCACATGCCACCATAGAAT i otoGar3.GL873580 C 0 I 457 s mm10.chr8 86652500 59 - 129401213 GTCATGATAGGTAAAAGGATGCCCTGATACATATGGCAAAGCACAGGACACCAAAGAAA i mm10.chr8 I 191 C 0 e micMur3.chr14 17551624 272 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e panPan2.chr4 192847607 3189 + 195804263 I a score=182152.000000 s hg38.chr4_KI270789v1_alt 181131 23 + 205944 gctagagccaaaagga--tttaaca------------ s panTro5.chr4 192966037 23 + 194502333 gctagagccaaaagga--tttaaca------------ i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881872 23 + 4876863 gctagagccaaaagga--tttaaca------------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770322 23 + 115148730 gctagagccaaaagga--tttaaca------------ i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048953 23 + 190429646 gttagagccaaaagga--tttaaca------------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991845 23 + 189454096 gttagagccgaaagga--tttaaca------------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382859 23 - 25927173 gttagagccaaaagga--tttaaca------------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412638 23 + 4669795 gttagagccaaaagga--tttaaca------------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369646 23 + 135778131 gttagagccaaaagga--tttaaca------------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836435 23 - 2847728 gttagagccaaaagga--tttaaca------------ i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936457 23 + 2368649 gttagagcgaaaagga--tttaaca------------ i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669286 25 - 190850796 GTTAGAGCCAAAAAGATATTTAATG------------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162458 25 - 14256875 gttagagccaaaaagatgtttaatg------------ i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054086 25 - 2196201 GTTAGCGCCAAAAagatatttaatg------------ i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440106 25 - 5030052 gttagagccaaaaatatatttaatg------------ i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11285007 25 - 11315646 ATTAgacccaaaaggatatctgata------------ i otoGar3.GL873580 I 457 C 0 s mm10.chr8 86652559 37 - 129401213 TTTTAATCCTaagggatatttgaagggatatttgaTG i mm10.chr8 C 0 C 0 e micMur3.chr14 17551624 272 - 93316391 I e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e panPan2.chr4 192847607 3189 + 195804263 I a score=481496.000000 s hg38.chr4_KI270789v1_alt 181154 43 + 205944 catacttttcttgataag-aaataggagacaaataaaagttcaa s panTro5.chr4 192966060 43 + 194502333 catacttttcttgataag-aaataggagacaaataaaagctcaa i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881895 43 + 4876863 catacttttcttgataag-aaataggagacaaataaaagttcaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770345 43 + 115148730 catacttttcttgataag-aaaaaggagacaaataaaagttcaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189048976 43 + 190429646 catacttttcttgataag-aaaaaggagacaaatagaagttcaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991868 43 + 189454096 catacttttcttgataag-aaaaaggagacaaatagaagttcaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382882 43 - 25927173 catacttttcttgataag-aaaaaggagacaaatagaagttcaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412661 43 + 4669795 catacttttcttgataag-aaaaaggagacaaatagaagttcaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369669 43 + 135778131 catacttttcttgatagg-aaaaaggagacaaatagaagttcaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836458 43 - 2847728 catacttttcttgataag-aaaaaggagacaaatagaagttcaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936480 43 + 2368649 catacttttcttgataag-aagaaggagacaaatagaagttcaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669311 43 - 190850796 CATAATTTTCTTGATAAG-AAAAAGAAGACAAATAAAAGTTCGG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162483 43 - 14256875 catacttttcttgataag-aaaaaggagacaaataaaagttcgg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054111 43 - 2196201 cttacttttcttgataag-aaaaaggagataaataaaagttcgg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440131 43 - 5030052 catacttttcttgataag-aaaaaggagacaaataaaagttcag i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17551896 44 - 93316391 CATACTTTTTGTgataagagaaaaggagacaaataaaagttcag i micMur3.chr14 I 272 C 0 s otoGar3.GL873580 11285032 44 - 11315646 catccttttcttgataaggaaaagggaggcaaataaaagttcag i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86652596 40 - 129401213 TGTGGTTTTCCTATTAAG-AGTCAAGAGG---AGAAAACTTTAA i mm10.chr8 C 0 C 0 e dasNov3.JH570353 1503713 2465 - 2520184 I e canFam3.chr16 17001158 2 - 59632846 I e panPan2.chr4 192847607 3189 + 195804263 I a score=864810.000000 s hg38.chr4_KI270789v1_alt 181197 72 + 205944 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTTCAAGAGTAGAAAATGT s panTro5.chr4 192966103 72 + 194502333 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTTCAAGAGTAGAAAATGT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3881938 72 + 4876863 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTTCAAGAGTAGAAAATGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770388 72 + 115148730 tgatttgctggaggtca---cgctgatatttagtggaagagcaaagacctaggg--cccTTCAAGAGGAGAAAATGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049019 72 + 190429646 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991911 72 + 189454096 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382925 72 - 25927173 cgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412704 72 + 4669795 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369712 72 + 135778131 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836501 72 - 2847728 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTCCAAGAGTAGAAAATGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936523 72 + 2368649 tgatttgctggaggtca---cactgatatttagtggaagaacaaagacctaggg--cccTTCAAGAGTAGAAAATGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669354 74 - 190850796 TGATTTGCTGGAGGTCA---TGCTGATATTTAGCAGAAGAACAAAGACCTCGGGCCCCCTTCAGGAGTAGAAAATGT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162526 74 - 14256875 tgatttgctggaggtca---cactgatatttagcagaagaacaaagacctcgggcccccgtcAGGAGTAAAAAATGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054154 73 - 2196201 tgatttgccggaggtca---cactgatatttagtagaagaacaaagacctcggg-cccCTTCAGGAGTAGAAAATGT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440174 74 - 5030052 tgatttgctggaggtca---cactgatatttagcagaagaacaaagacctcgggccccctTTATGAGTAGAAAATGT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17551940 74 - 93316391 tgatttgctagaggtca---cactgatatttaatggaagaacaaaaacctaggGCAAACTTGGAAACTAGGAAATGT i micMur3.chr14 C 0 C 0 s otoGar3.GL873580 11285076 73 - 11315646 tgatttggtggcggttg---cgctgatatttagtggtagagcagagacCTA-GGCTACCTTGGAGAGTAGGAAATGT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86652636 74 - 129401213 AATTTTCCTGGAGGTTA---TGGTGATATTCAGTGGAAGAACAAAGATAGAGAGCTACCTAAGAGACTATGAAATAT i mm10.chr8 C 0 C 0 s canFam3.chr16 17001160 77 - 59632846 TGATTTGCTGCCATTTATGTCACTGATATTTAGTGGGAAGAACAAAACTTAGGGCCACCTTAAAAACCATAAAATGT i canFam3.chr16 I 2 C 0 e dasNov3.JH570353 1503713 2465 - 2520184 I e panPan2.chr4 192847607 3189 + 195804263 I a score=1869647.000000 s hg38.chr4_KI270789v1_alt 181269 159 + 205944 TATACAAATGTCAACCGCTAAGCATTGGGGGTATTTATTGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCGTTA-------CTCTGAAAAT s panTro5.chr4 192966175 159 + 194502333 TATACAAATGTCAACCGCTAAGCTTTGGGGATATTTATTGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCGTCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACCGCGTTA-------CTCTGAAAAT i panTro5.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882010 159 + 4876863 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATTGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACTGTCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACCGCGTTA-------CTCTGAAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770460 159 + 115148730 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTCAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049091 159 + 190429646 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCCTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAGTAACTGCTTTA-------CTCTGAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187991983 159 + 189454096 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24382997 159 - 25927173 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412776 159 + 4669795 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369784 159 + 135778131 TATACAAATGTCAACTGCTAAGCTTTGGGGACATTTATCGATCTTTATAATTTAGAGGTAATGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836573 159 - 2847728 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAACGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGTGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936595 159 + 2368649 TATACAAATGTCAACTGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAACGGGCTCTGAGCATCAGACCATCTGATAACTTTAGTTCATCAGATTCTCAAAGAGTTCATCACTAGA-AGAAGCTAAATAACTGCTTTA-------CTCTGAAAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669428 158 - 190850796 TATACAAATGTCAACCGCCAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGATAATGGGCTCTGGGCATGAGATCATCTGATAATGTTAGTTCATCAGGTCCTCAAAATGTTCATCACCTAA-AGAAGATAA-TAACTGCTTTA-------CTCCGAAAAA i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13162600 155 - 14256875 TATACAAATGTCAACCGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGATAATGGGCTCTGAGCATCAGACCATCTGATAACGTTAGT---TCAGGTCCTCAAAATGTTCATCACTTAA-AGAAGATAA-TAACTGCTTTA-------CTCCAAAAAA i saiBol1.JH378165 C 0 I 3 s cebCap1.NW_016107886v1 1054227 155 - 2196201 TATACAAATGTCAACTGCGAAGCTTTGGGGATATTTATTGATCTTTATAATTCAGAGATAATGGGCTCTGAGCATCAGAACATCTGATAACGTTAGT---TCAGGTCCTCAAAATGTTCATCACTTAA-AGAAGATAA-TAACTGCTTTA-------CTCCGAAAAA i cebCap1.NW_016107886v1 C 0 I 3 s aotNan1.NW_018492112v1 3440248 158 - 5030052 TATACAAATGTCAACCGCTAAGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGATAATGGGCTCTGAGCATCAGACCATCTGATAACATTAGTTCATCAGGTCCTCAAAATGTTCATCACTTAA-AGAAGATAA-TAACTGCTTTA-------CTCTGAAAAA i aotNan1.NW_018492112v1 C 0 I 3 s micMur3.chr14 17552014 159 - 93316391 TATACAAATATCAACTTCAACGCTTTGGGGATATTTATCGATCTTTATAATTTAGAGGTAACAGGCACTGAGCATTAGACCATCAGATCATGTTAGTTCATCAGATTCTCAAAATGTTCATAAGTCAA-GCAAGTTAAACAACTGCTTTA-------TCTTAAACAA i micMur3.chr14 C 0 I 2 s otoGar3.GL873580 11285149 146 - 11315646 TATACAAATATCAACTTCAAAGCTTCAGGGATATTTATCGATTTTTGTAATTTAGA----------CCTGAGTGTTAGACCTCCAGATAATGTTAGTTCATCTGATTCTTAAAATCTTCTTAACTCAG---AGGTTAAACAGCTG-TATA-------TCCTGAGCAA i otoGar3.GL873580 C 0 I 1 s mm10.chr8 86652710 146 - 129401213 TATACAAATATCAGTCTTCAAGCTTTGGAGATATTTATTGATCTTTGGCAGTAATAGTTA--------TGAAAGTTAGATAATGGGATA---CTAATTTAGTATAGTCTCAAAAATTTAATAAC--AC-AGAAGATAACCAATGGTTTTA-------TCCTGAACTC i mm10.chr8 C 0 C 0 s canFam3.chr16 17001237 144 - 59632846 TATGTAAATATCAGTCTTAAAGCTTTGGGAATATTTATCGATCTTTATAATTTACAGGTAATGGGCTCTAGTTGCTAGATCATCTGATGATGCTAAT--------------------TCGTGACTCAG-AGAAGATGAACAATGGTTTTGGAGTTATCAATAAAA-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1506178 153 - 2520184 TAGGCAAGTACCAGCCTCCAAGCTTTGGGG-TATTTGTTGAACTTTAGAGTTCAGAGGTGGTGGGAGCTGGGCACTGCACCGTCTGATG----CAGTTCATCAGGTTCTCAGA--GTTCATGACCAAGTACGGGAAGAATACCTGCTTTA-------GACGGAAGAA i dasNov3.JH570353 I 2465 C 0 e panPan2.chr4 192847607 3189 + 195804263 I a score=623011.000000 s hg38.chr4_KI270789v1_alt 181428 46 + 205944 AAAAAATGAATATTGAGTCTGTTATACATTCTTT------GATTTT-AGGATG s panTro5.chr4 192966334 46 + 194502333 AAAAAATGAATATTGAGTCTGTTATACATTCTTT------GATTTT-AGGATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192850796 46 + 195804263 aaaaAATGAATATTGAGTCTGTTATACATTCTTT------GATTTT-AGGATG i panPan2.chr4 I 3189 C 0 s gorGor5.CYUI01015356v1 3882169 46 + 4876863 AAAAAATGAATATTGAGTCTGTGATACATTCTTT------GATTTT-AGGATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770619 46 + 115148730 AAAAAATGAATATTGAGTCTGTTATACATTCTTT------GATTTT-AGGATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049250 46 + 190429646 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGATG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992142 46 + 189454096 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGATG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383156 46 - 25927173 AAAAAATGAATATTGAGTCTGTTACACATTCCTT------GATTTT-AGGATG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412935 46 + 4669795 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGATG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369943 46 + 135778131 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGATG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836732 46 - 2847728 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGATG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936754 46 + 2368649 AAAAAATGAATATTGAGTCTGTTACACATTCTTT------GATTTT-AGGACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189669589 47 - 190850796 AAAAAATGAATATTGAGGCTGTTATACATTCTTT------GATTTTAAGGATG i calJac3.chr3 I 3 I 374 s saiBol1.JH378165 13162758 46 - 14256875 AAAAAGTGAATATTGAGGCTGTTATACATTCTTT------GATTTT-AGGATG i saiBol1.JH378165 I 3 C 0 s cebCap1.NW_016107886v1 1054385 46 - 2196201 AAAACATGAATATTGAGGCTGTTCTAAGTTCTTT------GATTTT-AGGATG i cebCap1.NW_016107886v1 I 3 C 0 s aotNan1.NW_018492112v1 3440409 46 - 5030052 AAAAAATGAATATTGAGGCTGTTACACATTCTTT------GATTTT-AGGATG i aotNan1.NW_018492112v1 I 3 C 0 s micMur3.chr14 17552175 46 - 93316391 AAAAAATGAATATTGAGTCTTTTATACATTCTCT------TATTTT-AGGATG i micMur3.chr14 I 2 C 0 s otoGar3.GL873580 11285296 48 - 11315646 AAAAAATGAA----GAGTCTATTATATACTCttttattaatatttt-aagatt i otoGar3.GL873580 I 1 C 0 s mm10.chr8 86652856 39 - 129401213 AGAAAATTAATATTTTTTCTCATAC-------TT------AGTTTT-AAGATT i mm10.chr8 C 0 C 0 s canFam3.chr16 17001381 46 - 59632846 AAGGAGTGAGTACTGAATCTATTATATACATTTT------GATTTT-AGGATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1506331 43 - 2520184 --AAGGCAGATGG-GAAATTACCACGCACCCTTT------GATTTT-AGGAAT i dasNov3.JH570353 C 0 C 0 a score=88960.000000 s hg38.chr4_KI270789v1_alt 181474 6 + 205944 TAAAAT s panTro5.chr4 192966380 6 + 194502333 TAAAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192850842 6 + 195804263 TAAAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882215 6 + 4876863 TAAAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770665 6 + 115148730 TAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049296 6 + 190429646 TAAAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992188 6 + 189454096 TAAAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383202 6 - 25927173 TAAAAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412981 6 + 4669795 TAAAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369989 6 + 135778131 TAAAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836778 6 - 2847728 TAAAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936800 5 + 2368649 TAAAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670010 6 - 190850796 TAAAAT i calJac3.chr3 I 374 C 0 s saiBol1.JH378165 13162804 6 - 14256875 TAAAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054431 6 - 2196201 TGAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440455 6 - 5030052 TAAAAT i aotNan1.NW_018492112v1 C 0 C 0 s micMur3.chr14 17552221 6 - 93316391 TAAAAT i micMur3.chr14 C 0 N 0 s otoGar3.GL873580 11285344 6 - 11315646 aaaaat i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86652895 6 - 129401213 TAAAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 17001427 6 - 59632846 TAAAAT i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1506374 6 - 2520184 TAATTT i dasNov3.JH570353 C 0 C 0 a score=225366.000000 s hg38.chr4_KI270789v1_alt 181480 15 + 205944 TCCTTTTCTACTTCT s panTro5.chr4 192966386 15 + 194502333 TCCTTTTCTACTTCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192850848 15 + 195804263 TCCTTTTCTACTTCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882221 15 + 4876863 TCCTTTTCTACTTCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770671 15 + 115148730 TCCTTTTCTACTTCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049302 15 + 190429646 TCCTTTTCTACTTCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992194 15 + 189454096 TCCTTTTCTACTTCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383208 15 - 25927173 TCCTTTTCTACTTCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3412987 15 + 4669795 TCCTTTTCTACTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134369995 15 + 135778131 TCCTTTTCTACTTCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836784 15 - 2847728 TCCTTTTCTACTTCT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936805 11 + 2368649 ----TTTCTACTTCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670016 15 - 190850796 TCCTTTTCTACTTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162810 15 - 14256875 TCCTTTTCTACTTCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1054437 15 - 2196201 TCCTTTTCTACTTCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440461 15 - 5030052 TCCTTTTCTACTTCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11285350 15 - 11315646 tCCTTTTCTACtttt i otoGar3.GL873580 C 0 I 1551 s mm10.chr8 86652901 15 - 129401213 TCTCTTTCTGTTTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 17001435 15 - 59632846 TCCTTTTCTCCTTCT i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1506380 15 - 2520184 TTCTTTTCCACAACC i dasNov3.JH570353 C 0 C 0 a score=170993.000000 s hg38.chr4_KI270789v1_alt 181495 14 + 205944 CACAGGCAGCACTG s panTro5.chr4 192966401 14 + 194502333 CACAGGCAGCACTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192850863 14 + 195804263 CACAGGCAGCACTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882236 14 + 4876863 CACAGGCAGCACTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770686 14 + 115148730 CACAGGCAGCACTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049317 14 + 190429646 CACAGGCAGCACCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992209 14 + 189454096 CACAGGCAGCACCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383223 14 - 25927173 CACAGGCAGCACCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413002 14 + 4669795 CACAGGCAGCACCG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370010 14 + 135778131 CACAGGCAGCACCG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836799 14 - 2847728 CACAGGCAGCACCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936816 14 + 2368649 CACAGGCAGCACTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670031 14 - 190850796 CACAGGCAGCACTG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162825 14 - 14256875 CACAGGCAGCACTG i saiBol1.JH378165 C 0 I 50 s cebCap1.NW_016107886v1 1054452 14 - 2196201 CACGGGCAGCGCTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440476 14 - 5030052 CACAGGCAGCACTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86652916 14 - 129401213 CACAATTAACAGCA i mm10.chr8 C 0 C 0 s canFam3.chr16 17001450 14 - 59632846 CACAGTCAACACTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1506395 14 - 2520184 CACCATCAATCCTA i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2281417.000000 s hg38.chr4_KI270789v1_alt 181509 253 + 205944 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACCA--TTTGCCTC--AAGG------GTTTTTTTAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTATATGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCACTACATCGGTGAATCATGCTAAGCTCTTAATGACTCATTGTAGGTCTCTAAAATAATGGTATTTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAATAGC s panTro5.chr4 192966415 253 + 194502333 AGATCTACGTTGCAAAGTAAATTGGGATAGTATTAAAACCA--TTTGCCTC--AAGG------GTTTTTTTAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTATATGTGACCCGT-GGGCTGGTCTGTAGGTGGGACCCACTACATCGGTGAATCATGCTGAGCTCTTAATGACTCATTGTAGGTCTCTAAAATAATGATATTTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAGTAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192850877 253 + 195804263 AGATCTACGTTGCAAAGTAAATTGGGATAGTATTAAAACCA--TTTGCCTC--AAGG------GTTTTTTTAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTATATGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCACTACATCGGTGAATCATGCTAAGCTCTTAATGACTCATTGTAGGTCTCTAAAATAATGGTATTTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAGTAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882250 253 + 4876863 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACCA--TTTGCCTC--AAGG------GTTTTTAAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTATATGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCACTACATCGGTGAATCATGCTAAGCTCTTAATGACTCATTGTAGGTCTCTAAAATAATGGTATTTACAAATTCAAGACACATCTTTCATGAATAGCAAATGCTTACCATACAATAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770700 253 + 115148730 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAAG------GTTTTTTAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTATATGTGACCCAT-GGGCTGGTCTGTGGGTGGGACCCACTACATCTGTGAATCATGCTAAGCTCTTAATGACTCATCGTAGGTCTCTGAAATAATGGTATTTACAAATTCAAGACACATCTTTCTTGAATAGCAAACGCTTACCATACAATAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049331 259 + 190429646 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGGTTTTTTTTTTTTTAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCATTACATCGGTGAGTCATGTTAAGCTCTTAGGGACTCATCGTAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAACAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992223 259 + 189454096 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGGTTTTTTTTTTTTTAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCATTACATCGGTGAATCATGTTAAGCTCTTAGGGACTCATCGTAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAACAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383237 257 - 25927173 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGG--TTTTTTTTTTTAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCATTACATCGGTGAATCATGTTAAGCTCTTAGGGACTCATCGTAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAACAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413016 257 + 4669795 AGATCTATGTTGCAGAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGG--TTTTTTTTTAAAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGCAGGTGGGACCCATTACATCAGTGAATCATGTTAAGCTCTTAGGGACTCATCGTAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAACAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370024 256 + 135778131 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTACCTC--AAGT---TTTTTTTTTTAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCATTACATCGGTGAATCATGTTAAGCTCTTAGGGACTCATCATAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAATGCTTACCATACAACAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2836813 256 - 2847728 AGATCTATGTTGCAGAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGG---TTTTTTTTAAAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGGTGTGACCCAT-GGGCTGGTCTGTAGGTGGGACCCATTACATCGGTGAATCATGTTAAGCTCTTAGGGACTCATCGTAGGGCTCTAAAATAATGGCATGTACAAATTCAAGACACATCTTTCATGAATAGCAAACGCTTACCATACAACAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 936830 257 + 2368649 AGATCTATGTTGCAAAGTAAATTGGGATAGTATTAAAACTA--TTTGCCTC--AAGG--ATTTTTTTTTAAAATAAGTTTCTTGTGATAATGTATGTGAATGCCCCAAGTAGATGTGACCCGT-GGGCTGGTCTGTAGGTGGGACCCATTACATTGGTGAATCATGTTAAGCTCTTGGGGACCCATTGGAGGGCTCTAAAATAATGGTATGTACAAATTCAAGACACATCTTTCATGAAGAGCAAACGCTTACCATACAACAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670045 247 - 190850796 AAATCTACGATGCAAAATAAACTGGGATAGTATCAAAACCA--TTCACCTC--AGGG---GTTGTTTT----ATGAGTTTCTCATGATAATGTATGTGAATGCCCAAAATATACGTGACCCAT-GGGCTAGTTTGTAGGTGGGACCCACTGCATTGATGAGTCATGAGAGGCTCTTAGTGACTCATC---GGTCTCTAAAATAATGGTATTTACAAATTGAAGACACACCCTGCATGAATAGCAAGCACTTACCACACA--AGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1054466 252 - 2196201 AGATCCACGTTGCAAAATAAGCTGGGATAGTATCAAAACGA--CTCGCCTC--AAGG---GTTCTTTT----ATGAGTTTCTCATGATGATGTATGTGAATGCCCAAAATATACGTGACCCAC-GGGCTGGTTTGTAGGTGGGGCCCACTGCACTGATGAGTCATGAGAGGCTCTCAGTGACTGATCGTAGGTCTCTAAAATAATGGTATTTACAAATTCAAGACACATCTTGCATGAATAGCAAGCACTTACCATACAACAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440490 252 - 5030052 ATATCTATGTTGCAAAATAAACTGGGATAGTATCAAAACTA--TTCGCCTC--AAGG---GTTGTTTT----ATGAGTTTCTCATGATAATGTGTGTGAATGCCCAAAATATATGTGACCCAT-GGGCTGGTTTGTAGGTGGGACCCACTGCATTGATGAGTCATGAGAGGCTCTAAGTGACTCATCGTAGGTCTCTAAAATAATGGTATTTACAAATTCAAGACACATCTTGCATGAATTGCAAGCACTTACCATACAACAGA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86652930 181 - 129401213 AGGCAGATGATGCAAAGT-------GGTAACATTT-------------------------------------ATGAGTTCCT----------------AACATCTAAATTATCTGTAGC---T-GTGGCAGACGGTAAAAAAAAAT--TTATATTGGTGCATTGT----------------TTCATTGCCGATTGTGAAATGAATAGTGCCTTTAAATTTAAGGTACACTTGTCATGAATA-TAAACTGTTTTTTTAAAATACC i mm10.chr8 C 0 C 0 s canFam3.chr16 17001464 222 - 59632846 AGACCTATTATGCAAAGTAAAAT--GATAGCATTAATATTG--ACAATATA--AAAT----------TTTATAGGAGTTTCTTGAGGTAATGTTTATTAGTTCCCAACACATATGTGAACCACAGAGCTGGTCTGT-GGAGGGACTCATTATACTGGTGACTCG-------------------------GCATCTCCAAGATAATGATATTTATGAATTCAAAACTTACCTTTCATGAATAGCATGGTCTTGCTCTACAACAAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1506409 250 - 2520184 AGGTCTACGACACA-AGTAAGTTGGGATGATATGAATGATAATTTTAACTCATAAGG----------TTGTCATGAGTTTCCTGAGACAATGTTTTTAGATGCCCAACATATATGTAGACCATGGGGTTGCTCTATGGGAAGAACTCATTTAATTGGTTAATTTTGTTAGGCTTCCAATGTCTC---GTACATCTCTAAAAGAGTGGTAACTAAGAATTCAAAACATACCTTTCATGATTAGTAAGGGTTTACTGTACAACAGC i dasNov3.JH570353 C 0 I 460 e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=21840.000000 s hg38.chr4_KI270789v1_alt 181762 2 + 205944 AA s panTro5.chr4 192966668 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851130 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882503 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770953 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049590 2 + 190429646 AA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992482 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383494 2 - 25927173 AA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413273 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370280 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837069 2 - 2847728 AA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937087 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670292 2 - 190850796 AA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1054718 2 - 2196201 AA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440742 2 - 5030052 AA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86653111 2 - 129401213 AA i mm10.chr8 C 0 I 718 e dasNov3.JH570353 1506659 460 - 2520184 I e canFam3.chr16 17001686 0 - 59632846 C e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=191229.000000 s hg38.chr4_KI270789v1_alt 181764 24 + 205944 AATGAAGATAACACCAACTGAACT s panTro5.chr4 192966670 24 + 194502333 AATGAAGATAACACCAACTGAACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851132 24 + 195804263 AATGAAGATAACACCAACTGAACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882505 24 + 4876863 AATGAAGATAACACCAACTGAACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770955 24 + 115148730 AATAAAGATAACACCAATTCAACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049592 24 + 190429646 AATACAGATAGCACCAACTTAACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992484 24 + 189454096 AATACAGATAGCACCAACTTAACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383496 24 - 25927173 AATACAGATAGCACCAACTTAACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413275 24 + 4669795 AATACAGATAGCACCAACTTAACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370282 24 + 135778131 AATACAGATAGCACCAACTTAACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837071 24 - 2847728 AATACAGATAGCACCAACTTAACT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937089 24 + 2368649 AATAAAGATAGCACCAACTTAACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670294 24 - 190850796 AATAAAGATAACAGCAACTCAGCT i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1054720 24 - 2196201 AATAAAGACAACACCAACTCAACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440744 24 - 5030052 AATAAAGATAACAGCAACTCAGCT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17001686 14 - 59632846 AATAAAGATAACAT---------- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1506659 460 - 2520184 I e mm10.chr8 86653113 718 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1668256.000000 s hg38.chr4_KI270789v1_alt 181788 185 + 205944 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AATTGTTCATTTCCCCACGTGGTTGAGAGAGGAACATTAAATAAGTA-GCAATGTTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACAGA-TCTGAGATACTAGATAAGATGAAAATAACAATAT-- s panTro5.chr4 192966694 185 + 194502333 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AATTGTTCATTTTCCCACGTGGTTGAGAGAGGAACATTAAATAAGTA-GCAATGTTG----GGCTGGCTGGTGG------TTTTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACAGA-TCTGAGATACTAGATAAGATGAAAATAACAATAT-- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851156 185 + 195804263 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AATTGTTCATTTTCCCACGTGGTTGAGAGAGGAACATTAAATAAGTA-GCAATGTTG----GGCTGGCTGGTGG------TTTTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACAGA-TCTGAGATACTAGATAAGATGAAAATAACAATAT-- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882529 185 + 4876863 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AATTGTTCATTTTCCCATGTGGTTGAGAGAGGAACATTAAATAAGTA-GCAATGTTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACAGA-TCTGAGATACTAGATAAGATGAAAATAACAATGT-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112770979 185 + 115148730 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AATTGTTCATTTTCCCACGTGGTTGAGAGAGGAACATTAAATAAGTA-GCAATGTTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACAGA-TCCGAGATACTAGATAAGATGAAAATAACAATAT-- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049616 184 + 190429646 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTTCCCACCTGCTT-AGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATACGATGAAAATAACAATAT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992508 185 + 189454096 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTTCCCACCTGCTTGAGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTGGCTGGTAG------TTCTAAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATACGATGAAAATAACAATAT-- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383520 191 - 25927173 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTTCCCACCTGCTTGAGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTGGCTGGTGGATCATTTTTCCAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATATGATGAAAATAACAATAT-- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413299 185 + 4669795 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTTCCCACCTGGTTGAGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTAGCTGGTGG------TTCTAAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATACGATGAAAATAACAATAT-- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370306 185 + 135778131 CTCTATTTTCTGTTTCTATTTAACACCAACTC-AGATGTTCATCTTCCCACCTGCTTGAGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATACGATGAAAATAACAATAT-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837095 185 - 2847728 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTTCCAACCTGGTTGAGAGAGGAACATTAAATAAGTA-ACAATGCTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTGGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACTAGATACGATGAAAATAACAATAT-- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937113 185 + 2368649 CTCTATTTTCTGTTTCTGTTTAACACCAACTC-AGATGTTCATCTGCCCACCTGGTTGAGAGAGGAACGTTAAATAAATA-ACAATGCTG----GGCTGGCTGGTGG------TTCTAAGGATCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACTGA-CCTGAGGTACGAGATACGATGAAAATAACAATAT-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189670318 177 - 190850796 CTAT--------TTTCTGTTTGACACCAGTTC-AGCTGCTGGTTTTCCCATGTGGCTGAGAGAAGAACATTAAAAAAGCC-GCAGTGCTG----GGGTGGATGGTGG------CTCTGGGGGTCACCTAGCAAATGGAATGCCAGAGATTGTTTAGGAAATGA-CCTGAGACACTAGATAAGATGAAAATAACAACGT-- i calJac3.chr3 C 0 I 638 s cebCap1.NW_016107886v1 1054744 185 - 2196201 CTGTATTTTCTGTTTCTGTTTGACACCAGTCC-GGCTGTTGGTTTTCCCATGTGGTTGAGAGAAGAACATTAAAAAAGCC-ACAGTGCTG----GGATGGCTGGTGG------CTCTGGGGGTCACCTAGAAAATGGAATGCCAGAGGATGTTTAGAAACCGA-CCTGAGACACTAGATAAGATGAAAATAACAACGT-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440768 185 - 5030052 CTTTATTTTCTGTTTCTGTTTGACACCAGTTC-AGCTGTTGGTTTTCCCATGTGGTTGAGAGAAGAACATTAAAAAAGCT-GCAGTGCTG----GGATGGCTGGTGG------CTCTGGGGGTCACCTAGAAAATGGAATGCCAGAGATTGTTTAGAAACCGA-CCTGAGACACTAGATAAGATGAAAATAACAATGT-- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17001700 179 - 59632846 -----GCTTTTGTTTCTATTGAACACCAACTCTTACTCTTCCTTTTATACCATGTTTTAAAGGGCAACGTTAG--AGGTC-ATAAAACTGAGGTAGATGGCTGGTAG------TTATAAAGATTACCTAGAAAATGGACTATCAGAGATTG----GACACTGA-ATGAAGACAATAAGTAAAACAACAATAACAAACT-- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1507119 185 - 2520184 CTTTTTTTTTTTTGCATGTTGAAC-CCAACTT----TTTCTTTTATACACCATGAATAGGAGAGGAATATGAAATAACAACATATCTCTG----AGATGGCCAATGG------TGCTGCAGTTCACCTAGAAAATGGATTATCAGAGACTGAACAGGAGCTAACCCTGACACACTGCACAAGATGAAAACAACAGCAATG i dasNov3.JH570353 I 460 C 0 e mm10.chr8 86653113 718 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=620996.000000 s hg38.chr4_KI270789v1_alt 181973 73 + 205944 AAGCACAGTAGTCTTCGTAACCAAGTCTTATGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTACC s panTro5.chr4 192966879 73 + 194502333 AAGCACAGTAGTCTTCGTAACCAAGTCTTACATGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851341 73 + 195804263 AAGCACAGTAGTCTTCGTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882714 73 + 4876863 AAGCACAGTAGTCTTTGTAACTAAGTCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771164 73 + 115148730 AAGCACAGTAGTCTTCCTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049800 73 + 190429646 AAGCACAGTAGTCTTCGTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AGTTACAGAGATCAGTAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992693 73 + 189454096 AAGTACAGTAGTCTTCGTAACCAAGTCTTATGTGATTCAGAAATCAATAATCTA-AGTTACAGAGATCAGTAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383711 73 - 25927173 AAGCACAGTAGTCTTCGTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AGTTACAGAGATCAGTAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413484 73 + 4669795 AAGCACAGTAGTCTTCGTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370491 73 + 135778131 AAGCACAGTAGTCTTTGTAACCAAGTCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837280 73 - 2847728 AAGCACAGTAGTCTTCGTAACCAAGGCTTACGTGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937298 73 + 2368649 AAGCACAGTAGTCTTCATAACCAAATCTTACATGATTCAGAAATCAATAATCTA-AATTACAGAGATCAGTAAC i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1054929 73 - 2196201 AAGCCCAGTAGTCTTCGTAATCAGGCTCTATGTGATTCAGAAATCACTAACCTA-AACTACAGAGATCAGTAAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3440953 73 - 5030052 AAGCCCAGTAGTCTTTGTAACCAAGCTCTATGTGATTCAGAAATCAATAATCTA-AACGACAGAGATCAGTAAC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17001880 72 - 59632846 AGACATAAGGGTCATGGTAAGCAAGCTATCTGTGATTCAGAAAT--ATAATCAAGAAGTGCCGTGATCAGCTAC i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1507304 71 - 2520184 AAGCCTGGCGGCCTTGGTAAGCAAGCCATCTGTGACTTAGAAAT-GAGAGTGTA-GATGA-AGTTGTCAGCAGC i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189670495 638 - 190850796 I e mm10.chr8 86653113 718 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2370189.000000 s hg38.chr4_KI270789v1_alt 182046 288 + 205944 TATTACAGGAAACAGTCGATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCCTCA-----TATAAGTGAAAAAG----------AAA-----GGCTAAACGTCTTTGACCCCCAATTCCCATTCCCTTCACAGAAAACTAGC------TAAATATCTAAATTGCTACCATTAAATCACATTAAATA-------TTGCTCTTCTGCACTTTCTGGTCTGGTG--------TTGTAAAAAGCAGTT-GGTTGTGCATATAAGAATGAGGGAAA----TG-GAGGCTATCATTGGGACACAACGTATATCATA-ACAGTACGT-GAAGTGG-GTGGAG s panTro5.chr4 192966952 288 + 194502333 TATTATAGGAAACAGTCGATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTACCCTCA-----TATAAGTGAAAAAG----------AAA-----GGCTAAACGTCTTTGACCCCCAATTCCCATTCCCTTCACAGAAAACTAGC------TAAATATCTAAATTGCTACCATTAAATCACATTAAATA-------TTGCTCTTCTGAACTTTCTGGTCTGGTG--------TTATAAAAAGCAGTT-GGTTGTGCATATAAGAATGAGGGAAA----TG-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTACGT-GAAGTGG-GTGGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851414 288 + 195804263 TATTATAGGAAACAGTCGATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTACCCTCA-----TATAAGTGAAAAAG----------AAA-----GGCTAAACGTCTTTGACCCCCAATTCCCATTCCCTTCACAGAAAACTAGC------TAAATATCTAAATTGCTACCATTAAATCACATTAAATA-------TTGCTCTTCTGAACTTTCTGGTCTGGTG--------TTATAAAAAGCAGTT-GGTTGTGCATATAAGAATGAGGGAAA----TG-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTACGT-GAAGTGG-GTGGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3882787 288 + 4876863 TATTACAGGAAACAGTCGATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCCTCA-----TATAAGTGAAAAAG----------AAA-----GGCTAAACGTCTTTGACCCCCAATTCCCATTCCCTTCACAGAATACTAGC------TAAATATCTAAATTGCTACCATTAAATCACATTAAATA-------TTGCTCTTCTGAACTTTCTGGTCTGGTG--------TTGTAAAAAGCAGTT-GGTTGTGCATATAAGAATGAGGGAAA----TG-GAGGCTATCATTGGGACACAACGTATATCATA-ACAGTACGT-GAAGTGG-GTGGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771237 288 + 115148730 TATTACAGGAAACAGTCTATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCATCA-----TATAAGTGAAAAAG----------AAA-----GGCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAATATCTAAATTGCTACCATTAAATCACATTAAATA-------TTGCTCTTCTGAACTTTCTGGTCTGGTG--------TTGTAAAAAGCAGTT-GGTTGTGCATATAAGAATGAGGGAAA----TG-GAGGCTATCATTGGGACACAACGTATATCATA-ACAGTACAT-GAAGCGG-GTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189049873 289 + 190429646 TATTACAGGAATGAGTCTATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCATCA-----TATAAGTGGAACAA----------AAA-----GGCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAGTATCTAAATTGCTACCATTAGATCACATTAAATG-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TTGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAGGGAAA----AG-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTATAT-GAAGCTG-GTGGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187992766 289 + 189454096 TATTACAGGAATGAGTCTATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCATCA-----TATAAGTGGAAAAA----------AAA-----GGCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAGTATCTAAATTGCTACCATTAGATCACATTAAATG-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TTGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAGGGAAA----AG-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTATAT-GAAGCTG-GTGGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24383784 289 - 25927173 TATTACAGGAATGAGTCTATATCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCATCA-----TATAAGTGGAAAAA----------AAA-----GGCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAGTATCTAAATTGCTACCATTAGATCACATTAAATG-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TTGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAGGGAAA----AG-GAGGCTGTCATTGGGACACAACGAATATCATA-ACAGTATAT-GAAGCTG-GTGGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413557 289 + 4669795 TATTACAGGAATGAGTCTATATCCTCTGGGGCAGGATTTTACCTCT--GGTGTAGCATCA-----TATAAGTGGAAAAA----------AAA-----AGCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAATATCTAAATTGCTACCATCAGATCACATTAAATA-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TTGTAAAAAGCAGTTAGGTTGTGCATATAAGAATGAGGGAAA----AA-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTATAT-GAAGCGG-GTGGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370564 289 + 135778131 TATTACAGGAATGAGTCTATACCCTCTGGGGCAGGGTTTTACCTCT--GGTGTAGCATCA-----TGTAAGTGGAAAAA----------AAA-----GGCTAAATGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAATATCTAAATTGCTACTATTAGATCACATTAAATG-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TGGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAGGGAAA----AG-GAGGCTGTCATTGGGACACAACGTATATCATA-ACAGTATAT-GAAGCGG-GTGGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837353 288 - 2847728 TATTACAGGAATGAGTCTATATCCTCTGGGGCAGAATTTTACCTCT--GGTGTAGCATCA-----TATAAGTGGAAAAA----------AAA------GCTAAACGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAATATCTAAATTGCTACCATCAGATCACATTAAATA-------TTGCTCTTCTGACCTTTCTGACCTGGTG--------TTGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAAGGAAA----AA-GAGGCTGTCATTGGGACACAACATATATCATA-ACAGTATAT-GAAGCAG-GTGGAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937371 290 + 2368649 CATCACAGGAATGAGTCTATATCATCTGGGGCAGGGTTTTACCTCT--CGTGTAGCATCA-----TATAAGTGGAAAAA----------AAAA----GGCTAAATGTCCTTGACCCCCAATTCCCATTCCCTTCAAAGAAAACTAGC------TAAGTATCTAAATTGCTACCATTAGATCACATTAAAGG-------TTGCTCTTCTGACCTTTCTGGCCTGGTG--------TTGTAAAAAGCAGTTGGGTTGTGCATATAAGAATGAGGGAAA----AG-GAGACTGTCATTGGGACACAACGTATATCGTA-ACAGTATAT-GAAGAGA-GTGGAG i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1055002 287 - 2196201 TATTA-GGGAACCAGTCTCTGTCCCCTGGGGCAGGGTTTTACCTCT--GATGTGGCATCA-----TAGAAGCGGGAAAA----------AAGA----GGCTAAAC-TTCTTGACCCCTAATTTCCATTCCCTTCAAAGAAAACTAGC------TATATCTCTAAATTGCTCCCATTAAATCACATTAAGTA-------TTGCTCTTCTGAAGTTTCTGGCCTGGTG--------TTGCAAAAAACAGCTGGGTTGTCCATCT-AGAATGGGGGAAA----TG-GGGGCTGTAGTTGAGACACCGCGTATATCATA-ACAGTACAC-GAAGCAG-GTGGTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3441026 286 - 5030052 TATTACGGGAACCAGTCTATGTCCCCTGGGGCAGGGTTTTACCTCT--GATGTAGCATCA-----TATAAGCGGGAAAA----------AAAT----GGCTAAAC-TTCTTGACCCCCAGTTTCCATT-CCTTCAAAGAAAACTAGC------TATATCTCTAAATTGCTCCCGTTAAATCACATTAAATA-------TTGCTCTTCTGAAGTTTCTGGCCTGGTG--------TTGCAAAAAACAGTCGGGTTGTCCATCT-AGAAT-AGGGAAA----TG-GGGGCTGTAATTGAGACACGACGTATATCATA-ATGGTACAT-GAAGCGG-GCAGTG i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86653831 292 - 129401213 TACTGCAGAAGCCTATCCATGGGTTCGAGGTCAAGTTCATGCTTTT--GATGTAGCATCA-----TACAAATCAGAAAA----------CAAATACTGCTTTCCCTTCTCTTATTTCTAGTTTTCGTTCCCTTCATAGAAACTCAACAGAGTTTGTATCTCCAAATTGCTAAAGTTAAAACATATTAA-----------TAGCATGTTTAGTTTTCTGACCAGGGA--------TTATGCCAAGCATTTGAGTTGCC------AGAATAATGAAGAACCTAA-GTGGCTGTCCTTGGAATACAGTTTATATCATACACTTCTTAG-GAAGCCT-GTG--- i mm10.chr8 I 718 C 0 s canFam3.chr16 17001952 307 - 59632846 TATTACAGGAATCAAGCTATTTCCTCCAGGTCAG--TTCTATTTCT--GATGTAGCATCATATGTTATAAATGAAAAAA----------AATAAT--AACTAAATCTCCCTTCCCCCATTTTCCAGTTCCCTTCAAGAAAAAATAAC---AATTTTATCTCCACATTGCTAAAATGAAATCACATTAAATAAATACATCTGCTCTCTAGAACTTTCTGATGTGGTA--------CCATAAAAAGCAGTTAAGTTTCTACTATAAGAATGAAGGAAA---TTA-GTGGCCATAATTAGGACACAATTTATGTCATA-ACAGTACATGGAGGGGG-GTGTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1507375 301 - 2520184 TATTACAGGAACCAAGCTACGTCCTCCAGGGCAGGTTTGCACTTTTCCACTGTGGCATAAAAGAGCATACGTGAAAAAAATAAAAATGGAAA-----GGTTGAACGTCTCTCTTCCCAATATCCAAT-----------AACAATAGT------AATATTGCCAAATTGCTGAAATTAAATCACATGCAGTA----CATTTGACCCTTTGAATTTTCTGATCTGGTAGGTTACCTTTCTGAAAGGCAGGTAGGTTACCTTTCCACGAGAGAAGGAAA----TGAGTGGCTAT-----GGACGCATCT--CGTCCTA-ACAGTGAAT-ggaggggagtggag i dasNov3.JH570353 C 0 I 1158 e calJac3.chr3 189670495 638 - 190850796 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=402462.000000 s hg38.chr4_KI270789v1_alt 182334 86 + 205944 CGCTAACCTCAGTGTTTCTGC--------------AAGGGAGTCTGGACTG--CCCAGAGTGCATCCGTGTCATCCTGCATTTGGACATCATCA-CCAATTTC s panTro5.chr4 192967240 82 + 194502333 CGCTAACCTCAGTGTTTCTGC--------------AAGGGAGTCTGGACTG--CCCAGAGTGCATCCCTGTCATCCTGCATTTGGACATCGTCA-CCAA---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851702 82 + 195804263 CGCTAACCTCAGTGTTTCTGC--------------AAGGGAGTCTGGACTG--CCCAGAGTGCATCCCTGTCATCCTGCATTTGGACATCGTCA-CCAA---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883075 86 + 4876863 CGCTAACCTCAGTGTTTCTGC--------------AAGGGAGTCTGGACTG--CCCAGAGTGCATCCCTGTCATCCTGCATTTGGACATCGTCA-CCAATTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771525 84 + 115148730 CAGTAACCTCAGCGTTTCTGC--------------AAGGGAGTCTGGACTG--CCCAGAGATTGTCC--GTCATCCTGCATTTGGACGTCATCA-CCAGTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050162 67 + 190429646 CGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCTCTGTCATCTGGC--TTGGACATCATCACCCAATTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993055 68 + 189454096 CGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCTCTGTCATCCTGCATTTGGACATCATCA-CCAATTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384073 68 - 25927173 CGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCTCTGTCATCCTGCATTTGGACATCATCA-CCAATTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413846 68 + 4669795 CGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCCCTGTCATCCTGCATTTGGACATCATCA-CCAATTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370853 68 + 135778131 CGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCCCTGTCATCCTGCATTTGGACATCATCA-CCAATTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837641 68 - 2847728 TGCTAACCTCAGCGTTTCTG----------------------------------CCAGAGTGCGTCCCTGTCATCCTGCATTTGGACATCATCA-CCAATTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937661 85 + 2368649 CGCTAACCTCAGCGTTTCTGC---------------TGGGAGTCTGGACTG--CCCAGAGTGCGTCCCTGTTGTCCTGCATTTGGACATCATCA-CCAATTTC i colAng1.NW_012116221v1 C 0 C 0 s cebCap1.NW_016107886v1 1055289 82 - 2196201 CGCTAAGCTCAGCGTTTCTGC--------------GA--CAGTGTGGACTC---CCACAGTGCGTCCCTGTCGTCCT-CATTTGGACTTTGTCA-CCAATTTC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3441312 84 - 5030052 TGCTAAGCTCAGCGTTTCTGC--------------GAGCCAGTCTGGACTC---CCACAGTGTGTCCCTGTCATCCT-CATTTGGACTTTGTCA-CCAATTTC i aotNan1.NW_018492112v1 C 0 I 571 s mm10.chr8 86654123 78 - 129401213 --------TCATAGTTCCTGC--------------CAGGCAGTCTAGACTAA-TCCAGTATGGGTTAC-ATTATCCTGCATTTGGACTACATCA-CCTCTCTA i mm10.chr8 C 0 C 0 s canFam3.chr16 17002259 74 - 59632846 TATTTATCTCAGCATTTCTGCTTTTCCTTTCTTGGAAGCTGGTTTGGATAGATCCCAA-----------GTCCTATTGCACTTGA------------------ i canFam3.chr16 C 0 C 0 e calJac3.chr3 189670495 638 - 190850796 I e dasNov3.JH570353 1507676 1158 - 2520184 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=33287.000000 s hg38.chr4_KI270789v1_alt 182420 4 + 205944 TTTC s panTro5.chr4 192967322 4 + 194502333 TTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851784 4 + 195804263 TTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883161 4 + 4876863 TTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771609 4 + 115148730 TTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050229 2 + 190429646 TT-- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993123 4 + 189454096 TTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384141 4 - 25927173 TTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413914 4 + 4669795 TTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370921 4 + 135778131 TTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837709 4 - 2847728 TTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937746 4 + 2368649 TTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189671133 4 - 190850796 TTTC i calJac3.chr3 I 638 C 0 s cebCap1.NW_016107886v1 1055371 4 - 2196201 TTTC i cebCap1.NW_016107886v1 C 0 I 579 s aotNan1.NW_018492112v1 3441967 4 - 5030052 TTTC i aotNan1.NW_018492112v1 I 571 C 0 s mm10.chr8 86654201 4 - 129401213 TTCC i mm10.chr8 C 0 I 1 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002333 0 - 59632846 C e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=82701.000000 s hg38.chr4_KI270789v1_alt 182424 12 + 205944 CAAGGACCCTTG s panTro5.chr4 192967326 12 + 194502333 CAAGGACCCTTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851788 12 + 195804263 CAAGGACCCTTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883165 12 + 4876863 CAAGGACCCTTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771613 12 + 115148730 CAAGGACCCTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050231 12 + 190429646 CAAGGACCCTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993127 12 + 189454096 CAAGGACCCTTC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384145 12 - 25927173 CAAGGACCCTTC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413918 12 + 4669795 CAAGGACCCTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370925 12 + 135778131 CAAGGACCCTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837713 12 - 2847728 CAAGGACCCTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937750 12 + 2368649 CGAGGACCCTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189671137 12 - 190850796 CAAAGAACCCTC i calJac3.chr3 C 0 C 0 s aotNan1.NW_018492112v1 3441971 12 - 5030052 CAAGGAACCCTC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86654206 12 - 129401213 AGAGTGTCTGTC i mm10.chr8 I 1 I 4 s canFam3.chr16 17002333 3 - 59632846 ---------TTC i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1055375 579 - 2196201 I e dasNov3.JH570353 1507676 1158 - 2520184 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=566363.000000 s hg38.chr4_KI270789v1_alt 182436 63 + 205944 TGCC-CAAACAAAACTTGCACACATCAGATACATGCTGCCAATCCTGAAAAGTGAACATTTAAA s panTro5.chr4 192967338 63 + 194502333 TTCC-CAAACAAAACTTGCACACATCAGATAAATGCTGCCAATCCTGAAAAGTGAACATTTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851800 63 + 195804263 TTCC-CAAACAAAACTTGCACACATCAGATAAATGCTGCCAATCCTGAAAAGTGAACATTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883177 63 + 4876863 TGCC-CAAACAAAACTTGCACACATCAGATAAATGCTGCCAATCCTGAAAAGTGAACATTTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771625 63 + 115148730 TGCC-CAAACAAAACTTGCACAAATCCGATAAATGCTGCCAATCCTGAAAAGTGAACATTTAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050243 60 + 190429646 TGCC-AAAAC--AACTTCCACACATCAGATAAAT-CTGCCAATCCTGAAAAGTAAACATTTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993139 64 + 189454096 TGCCTAAAACAAAACTTCCACACATCAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384157 64 - 25927173 TGCCTAAAACAAAACTTCCACACGTCAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3413930 64 + 4669795 TGCCTAAAACAAAACTTCCACACTTCAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134370937 64 + 135778131 TGCCTAAAACAAAACTTCCACACATCAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837725 64 - 2847728 TGCCTAAAACAAAACTTCCACACTTCAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937762 64 + 2368649 TGCCTAAAGCAAAACTTCCACTCATGAGATAAATGCTGCCAATCCTGAAAAGTAAACATTTAAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189671149 63 - 190850796 TGCC-CGAACAAAACTTCCACACATCAGATAAATGCTGCCAATCCTGAAAAGAGAACATTTAAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1055954 62 - 2196201 TGCC-CGAACAAAACTTCCACACATCAGACAAATGCTGCCAATCTTGAAAAGTAAACA-TGAAA i cebCap1.NW_016107886v1 I 579 C 0 s aotNan1.NW_018492112v1 3441983 63 - 5030052 TGCC-CAAACAAAACTTCCACACATCAGATAAATGCTGCCAATCCTGAAAAGTTAACATTTAAA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86654222 52 - 129401213 GGCC-CAAACAGAA-----GCAGAACAG------GCTGTCAATGAGGAGGAGTAAACATTGAAA i mm10.chr8 I 4 I 4324 s canFam3.chr16 17002336 63 - 59632846 TGCC-CAAATCAAAACTCCCCTCATCAGATAAATGCTACCAATCATGGAGAGTGAAAATTGGAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=887350.000000 s hg38.chr4_KI270789v1_alt 182499 100 + 205944 -ACCTTAAAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACGTTTA-----TTCTGTTCTCAGCTCTGTGATGTGTTCTGTCTACCAAAAGGAAGCTCTATTGC s panTro5.chr4 192967401 100 + 194502333 -ACCTTAAAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCTCTGTGATGTGTTCTGTCTACCAAAAGGAAGCTCTATTGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851863 100 + 195804263 -ACCTTAAAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCTCTGTGATGTGTTCTGTCTACCAAAAGGAAGCTCTATTGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883240 100 + 4876863 -ACCTTAAAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACGTTTA-----TTCTGTTCTCAGCTCTGTGATGTGTTCTGTCTACCAAAAGGAAGCTCTACTGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771688 100 + 115148730 -ACCTTAAAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCGCTATGATGTGTTCTGTCTACCAAAAGGAAGCTCTATTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050303 98 + 190429646 -ACTTTAAAA-----CTTAATTTGAA-GTACC-GATCAATGGAATCACATTTA-----TTCTGTTCTGAACTCTATGATGTGTTCTGTCTACACAAAGGAAGCTCTGTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993203 100 + 189454096 -ACTTTAAAA-----CTTAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTGAACTCTATGATGTGTTCTGTCTACCAAAAGGAAGCTCTGTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384221 100 - 25927173 -ACTTTAAAA-----CTTAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTGAACTCTATGATGTGTTCTGTCTACCAAAAGGAAGCTCTGTTGC i macNem1.NW_012013133v1 C 0 M 515 s cerAty1.NW_012001672v1 3413994 100 + 4669795 -ACTTTAAAA-----CTTAATTTGAATGTATTTGATCAATATAATCACATTTA-----TTCTGTTCTCAACTCTATGATGTGTTCTGTCTACCAAAGGGAAGCTCTATTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371001 100 + 135778131 -ACTGTAAAA-----CTTAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAACTCTATGATGTGCTCTGTCTACCAAAAGGAAGCTCTGTTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837789 100 - 2847728 -ACTTTAAAA-----CTTAATTTGAATGTATCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAACGCTATGATGTGTTCTGTTTACCAAAGGGAAGCTCTATTGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937826 100 + 2368649 -ACTTTAAAA-----CTTAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCTCTACGATGTGTTCTGTCTACCAAAAGGAAGCTCTATTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189671212 100 - 190850796 -ACTTTAGAA-----CTGAATTTGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCTCTGTGACGTGTTCTGTCTACTGAAAGGAAGCTCTATTGC i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056016 105 - 2196201 -ACTTTAGAA-----CTTAATTTGAATGTACCTGATCAATGTACTCACATTTATTCTGTTCTGTTCTCAGCTCTATGATGTGCTCTCTCTACTAAAAGGAAGCTGTATTGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442046 99 - 5030052 -ACTTTAGAA-----CAT-ATATGAATGTACCTGATCAATGTAATCACATTTA-----TTCTGTTCTCAGCTCTATGATGTGTTCTGTCTACTAAAAGGAAGCTCTATTGC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002399 97 - 59632846 TACTTATAAGTATTCCTCAATATTAATGTGCCTGAACAA-----TCATATTTA-----ATTGGTTCTCAGATCTATTATTTGTTC----TACCTAAAGAAAGTTCTGTTGT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=202921.000000 s hg38.chr4_KI270789v1_alt 182599 31 + 205944 AGCCA-TTCAATGGTAATCCTGCTTG-TACTCA s panTro5.chr4 192967501 31 + 194502333 AGCCA-TTCAATGGTAATCCTGCTCA-TACTCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851963 31 + 195804263 AGCCA-TTCAATGGTAATCCTGCTCA-TACTCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883340 31 + 4876863 AGCCA-TTCAATGGTAATCCTGCTCG-TACTCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771788 31 + 115148730 AGCCA-TTCAATGGTAATCCTGCTCG-TACTCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050401 32 + 190429646 CGCCA-TTCAATGGTAATACTGCTTGCCACCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993303 31 + 189454096 CGCCA-TTCAATGGTAATACTGCTTG-CACTCA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414094 31 + 4669795 AGGCA-TTCAATGGTAATCCTGCTTG-CACTCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371101 31 + 135778131 CGCCA-TTCAATGGTAATACTGCTTG-CACTCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837889 31 - 2847728 AGGCA-TTCAATGGTAATCCTGCTTG-CACTCA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 937926 31 + 2368649 AGCCG-TTCAATGGTAGTCCTGCTTG-CACTCA i colAng1.NW_012116221v1 C 0 I 696 s calJac3.chr3 189671312 29 - 190850796 AGCCA-CTCAATGGTAAGACTGCTTG-TA--CA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056121 29 - 2196201 AGCCA-CTCAA--GTAAGACTGCTTG-TACTCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442145 31 - 5030052 AGCCA-CTCAATGGTAAGACTGCTTG-TACTCA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002496 32 - 59632846 AGACATTTCAATTATGAACTTTCTTC-TACTCA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=280794.000000 s hg38.chr4_KI270789v1_alt 182630 54 + 205944 CAGAGTACTACTATTCT-AAGAGCTTGGTAATATACTG-CACATttt--------------------------tctcttctc s panTro5.chr4 192967532 54 + 194502333 CAGAGTACTGCTATTCT-AAGAGCTTGGTAATATACTG-CACATTTt--------------------------tctcttctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192851994 54 + 195804263 CAGAGTACTGCTATTCT-AAGAGCTTGGTAATATACTG-CACATTTt--------------------------tctcttctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883371 54 + 4876863 CAGAGTACTACTATTCT-AAGAGCTTGGTAATATACTG-CACATTTt--------------------------tctcttctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771819 55 + 115148730 CAGAATACTACTATTCT-AAGAGCTTGGTAATATACTG-CACATTTT-------------------------CTctcccctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050433 63 + 190429646 CGGAGTAGTACTATTCTAAAGAGCTTGGTAATATACTAGCACATTTT-------------------TCTTtcccctctcctc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187993334 53 + 189454096 CGGAGTAGTACTATTCT-AAGAGCTTGGTAATATACTA-CACATTTT---------------------------ctcttctc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414125 80 + 4669795 CGGAGTAGTACTATTCT-AAGAGCTTAGTAATATACTG-CACATTttctcttctcctctcttctcttttctccgctctcctc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371132 53 + 135778131 CCGAGTAGTACTATTCT-AAGAGCTTGGTGATATACTA-CACATTTT---------------------------CTCTtctc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2837920 53 - 2847728 CGGAGTAGGACTATTCT-AAGAGCTTGGTAATATACTG-CACATTTT---------------------------CTCTTCTC i manLeu1.NW_012102221v1 C 0 I 134 s calJac3.chr3 189671341 54 - 190850796 CGGAGTACTACTATTCT-AAGAGCTTGGAAATGCACTA-CACATTTT--------------------------Ctttttctt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056150 54 - 2196201 CAGAGTACTGCTATTCT-AAGAGCTTGGAAATATACTG-CACATTTT--------------------------CTTTTTCTt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442176 54 - 5030052 CAGAGTACTACTATTCT-AAGAGCTTGGAAATATACTG-CACAtttt--------------------------ctttttctt i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002528 39 - 59632846 AAAAGTTTTATTATTCT-GAGAAATTGCTTGAAAATGG-CA----------------------------------------- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1677.000000 s hg38.chr4_KI270789v1_alt 182684 17 + 205944 tt------------------ttctcttctcttctc s panTro5.chr4 192967586 25 + 194502333 ttcac----------ttctcttctcttctcttctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852048 20 + 195804263 ttcac---------------ttctcttctcttctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883425 35 + 4876863 ttctcttctcttctcttctcttctcttctcttctc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771874 35 + 115148730 ccctcccctcccctcccctcccctcccctccgctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050496 17 + 190429646 ------------------tcctctcctctcccctc i rheMac8.chr5 C 0 I 25 s macFas5.chr5 187993387 17 + 189454096 ------------------ctctctcctctcctctc i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414205 17 + 4669795 ------------------tcctctcctctcctctc i cerAty1.NW_012001672v1 C 0 I 35 s chlSab2.chr7 134371185 17 + 135778131 ------------------ctctctcctctcctctc i chlSab2.chr7 C 0 I 177 s calJac3.chr3 189671395 6 - 190850796 ---------------------tctttc-------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056204 6 - 2196201 ---------------------tctttc-------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442230 6 - 5030052 ---------------------tctttt-------- i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002567 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e manLeu1.NW_012102221v1 2837973 134 - 2847728 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=6838.000000 s hg38.chr4_KI270789v1_alt 182701 4 + 205944 ttct s panTro5.chr4 192967611 4 + 194502333 ttct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852068 4 + 195804263 ttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883460 4 + 4876863 ttct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771909 4 + 115148730 tcct i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050538 4 + 190429646 ccct i rheMac8.chr5 I 25 C 0 s macFas5.chr5 187993404 4 + 189454096 ctct i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414257 4 + 4669795 ccct i cerAty1.NW_012001672v1 I 35 C 0 e calJac3.chr3 189671401 0 - 190850796 C e cebCap1.NW_016107886v1 1056210 0 - 2196201 C e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002567 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3442236 0 - 5030052 C e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e manLeu1.NW_012102221v1 2837973 134 - 2847728 I e chlSab2.chr7 134371202 177 + 135778131 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=26408.000000 s hg38.chr4_KI270789v1_alt 182705 11 + 205944 tctcttctctt s panTro5.chr4 192967615 11 + 194502333 tctcttctctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852072 11 + 195804263 tctcttctctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883464 11 + 4876863 tctcttctctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771913 11 + 115148730 ccccttccctt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189050542 10 + 190429646 -cccctcccct i rheMac8.chr5 C 0 I 58 s macFas5.chr5 187993408 10 + 189454096 -cccctcccct i macFas5.chr5 C 0 I 856 s cerAty1.NW_012001672v1 3414261 10 + 4669795 -cccctccctt i cerAty1.NW_012001672v1 C 0 I 29 s manLeu1.NW_012102221v1 2838107 11 - 2847728 tctcttctctt i manLeu1.NW_012102221v1 I 134 I 1 s calJac3.chr3 189671401 2 - 190850796 ---------ct i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056210 11 - 2196201 tttcttttttt i cebCap1.NW_016107886v1 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002567 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3442236 0 - 5030052 C e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e chlSab2.chr7 134371202 177 + 135778131 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=36023.000000 s hg38.chr4_KI270789v1_alt 182716 12 + 205944 tctttttctttt s panTro5.chr4 192967626 12 + 194502333 tctttttctttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852083 11 + 195804263 tc-ttttcttTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883475 12 + 4876863 tctttttctttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112771924 12 + 115148730 ccctTCTCTTCT i nomLeu3.chr7b C 0 I 4140 s rheMac8.chr5 189050610 12 + 190429646 tcttcttttttt i rheMac8.chr5 I 58 C 0 s macFas5.chr5 187994274 12 + 189454096 tcttcttttttt i macFas5.chr5 I 856 C 0 s cerAty1.NW_012001672v1 3414300 12 + 4669795 tcttcttttttt i cerAty1.NW_012001672v1 I 29 C 0 s manLeu1.NW_012102221v1 2838119 12 - 2847728 tcttcttttctt i manLeu1.NW_012102221v1 I 1 C 0 s calJac3.chr3 189671403 12 - 190850796 tttttttttttt i calJac3.chr3 C 0 I 2 s cebCap1.NW_016107886v1 1056221 12 - 2196201 tttttttttttt i cebCap1.NW_016107886v1 C 0 I 2 s aotNan1.NW_018492112v1 3442236 2 - 5030052 ----------tt i aotNan1.NW_018492112v1 C 0 I 2 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002567 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e chlSab2.chr7 134371202 177 + 135778131 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=83774.000000 s hg38.chr4_KI270789v1_alt 182728 22 + 205944 gacggagtcttgctctgtcgcc s panTro5.chr4 192967638 22 + 194502333 gacggagtcttgctctgtcgcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852094 22 + 195804263 Tacggagtcttgctctgtcacc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883487 22 + 4876863 gacggagtcttgctctgtcgcc i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050622 22 + 190429646 gatggagtcttgctctgttgca i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994286 22 + 189454096 gatggagtcttgctctgttgca i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414312 22 + 4669795 gatggagtcttgctctgttgca i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012102221v1 2838131 22 - 2847728 aatggagtcttgctctgttgca i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671417 22 - 190850796 gctggagacttgctctgtcccc i calJac3.chr3 I 2 C 0 s cebCap1.NW_016107886v1 1056235 22 - 2196201 gctggagacttgctctgtcccc i cebCap1.NW_016107886v1 I 2 C 0 s aotNan1.NW_018492112v1 3442240 22 - 5030052 gctggagacttgctctgtcccc i aotNan1.NW_018492112v1 I 2 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002567 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e chlSab2.chr7 134371202 177 + 135778131 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=158273.000000 s hg38.chr4_KI270789v1_alt 182750 34 + 205944 caggctggagtgcagtggcaccatcttggctca-t s panTro5.chr4 192967660 34 + 194502333 caggctggagtgcagtggtaccatcttggctca-t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852116 34 + 195804263 caggctggagtgcagtggcaccatcttggctca-t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883509 34 + 4876863 caggctggagtgcagtggcaccatcttggctca-t i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050644 34 + 190429646 caggctgttgtgcagtggcaccatctcggctca-t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994308 34 + 189454096 caggctgttgtgcagtggcaccatctcggctca-t i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414334 34 + 4669795 caggctggagtgcagtggcatcatctcggctca-t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371379 34 + 135778131 caggctggagtgcagtggcaccatctcggctca-t i chlSab2.chr7 I 177 C 0 s manLeu1.NW_012102221v1 2838153 34 - 2847728 caggctggagtgcagtggcatcatctcggctca-t i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671439 33 - 190850796 caggctgcagtgcagtggtgcgatcttggctca-- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056257 33 - 2196201 caggctggagtgcagtggtgcgatcttggctca-- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442262 34 - 5030052 caggctggagtgaagtggtgccatcttggctcat- i aotNan1.NW_018492112v1 C 0 I 9 s canFam3.chr16 17002567 18 - 59632846 GAAGCTGTAGTGGGATAG----------------- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=41893.000000 s hg38.chr4_KI270789v1_alt 182784 18 + 205944 tgcaacctccacctgcca s panTro5.chr4 192967694 18 + 194502333 tgcaacctccacccgcca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852150 18 + 195804263 tgcaacctccacctgcca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883543 18 + 4876863 tgcaacctccacctgcca i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050678 18 + 190429646 tgcaacctccatctattg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994342 18 + 189454096 tgcaacctccatctatcg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414368 18 + 4669795 tgcaacctccatctatcg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371413 18 + 135778131 tgcatcctccaactatcg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838187 18 - 2847728 tgcaacctccatctatcg i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671472 10 - 190850796 -tctgcctcca------- i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056290 10 - 2196201 -tcttcctccg------- i cebCap1.NW_016107886v1 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002585 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3442296 9 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=267674.000000 s hg38.chr4_KI270789v1_alt 182802 55 + 205944 ggttcaagcaattctcctgcctcagccacctgagtagctgggattataggcacat s panTro5.chr4 192967712 55 + 194502333 ggttcaagcaattctcctgcctcagccacctgagtagctgggattataggcacac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852168 55 + 195804263 ggttcaagcaattctcctgcctcagccacctgagtagctgggattataggcacac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883561 55 + 4876863 ggttcaagcaattctcctgcctcagccacctgagtagctgggattataggcacac i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050696 55 + 190429646 ggttcaagcaattctcctgcctcagccgcctgagtagctaggattataggcacac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994360 55 + 189454096 ggttcaagcaattctcctgcctcagccgcctgagtagctaggattataggcacac i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3414386 55 + 4669795 ggttcaagcaattctcctgcctcagctgcccgagtagctgggattataggcacac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371431 55 + 135778131 ggttcaagcaattctcctgcctcagccgcctgagtagctgggattataggcacac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838205 55 - 2847728 ggttcaagcaattctcctgcctcagctgcccgagtagctgggattataggcacac i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671482 55 - 190850796 ggcgcaagttattctcctgcttcagcctcccgagtagatgtgattacagatgcat i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056300 55 - 2196201 ggtgcaagtcattcttctgcttcagcctcccgagtacatgggatcacagacgcac i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442305 55 - 5030052 ggtgcaagcaattctcctacttcagcctcccgagcagatgggattacagacgcat i aotNan1.NW_018492112v1 I 9 C 0 s canFam3.chr16 17002585 19 - 59632846 ------------------------------GGAAGGGTTGATAATATAG------ i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e macNem1.NW_012013133v1 24384321 515 - 25927173 M e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=128146.000000 s hg38.chr4_KI270789v1_alt 182857 34 + 205944 gccaccatgcccagctaacttttg-ta--tttttttt s panTro5.chr4 192967767 36 + 194502333 gccagcatgcccagctaacttttg-tatttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852223 35 + 195804263 gccagcatgcccagctaacttttgtta--tttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883616 35 + 4876863 gccaccatgcccagcgaacttttg-ta-ttttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050751 28 + 190429646 gccaccatgcccagctaacttttg-ta--------gt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994415 28 + 189454096 gccaccatgcccagctaacttttg-ta--------gt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384837 28 - 25927173 gccaccatgcccagctaacttttg-ta--------gt i macNem1.NW_012013133v1 M 515 C 0 s cerAty1.NW_012001672v1 3414441 28 + 4669795 gccaccatgcccagctaacttttg-ta--------gt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371486 28 + 135778131 gccaccatgcccagctaacttttg-ta--------gt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838260 28 - 2847728 gccaccatgcccagctaacttttg-ta--------gt i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671537 28 - 190850796 gccaccatgcccggctaattttta-ta--------gt i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056355 28 - 2196201 accaccatgcctggctaatttttg-ca--------gt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442360 28 - 5030052 gccaccacacctggcaaatttttg-ta--------gt i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002604 14 - 59632846 ---------TCTAAATTTTTTTT-------------- i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=877294.000000 s hg38.chr4_KI270789v1_alt 182891 142 + 205944 tttttagtagagatggggtttcaccacattggccaggctggtcttgaactcccaaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcctagccTGTACTGCAGATTTTCTAA s panTro5.chr4 192967803 142 + 194502333 tttttggtagagatggggtttcaccacattggccaggctgatcttgaactcccgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaagcatgagccactgtgcctagccTATACTGCAGATTTTCTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852258 142 + 195804263 tttttagtagagatggggtttcaccacattggccaggctgatcttgaactcccgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcctagccTATACTGCAGATTTTCTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883651 142 + 4876863 tttttagtagagatggggtttcaccacattggccaggctggtcttgaactcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcctagccTATACTGCAGATTTTCTAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050779 142 + 190429646 tttttagtagagaccgagtttcaccacattggccaggctggtcttgaactactgaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcatagccTATTCTGCAGATTTTCTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994443 142 + 189454096 tttttagtagagaccgtgtttcaccacgttggccaggctggtcttgaactaccgaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcATAGTCTATTCTGCAGATTTTCTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24384865 142 - 25927173 tttttagtagagaccgagtttcaccacgttggccaggctggtcttgaactaccgaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcatagccTATTCTGCAGATTTTCTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3414469 142 + 4669795 tttttagtacagaccgagttttaccacgttggccaggctggtcttgaactaccgaccttgtgatctgcccactttggcctcccaaagtgctgggattacaagcgtgagccactgtgcATATCCTATTCTGCAGGTTTTCTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371514 142 + 135778131 tttttagtagagaccgagtttcaccacgttggccaggctggtcttgaactaccgaccttgtgatctgcccaccttggcctcccaaagtgctgggattacaagcgtgagccactgtgcatagccGATTCTGCAGATTTTCTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838288 142 - 2847728 tttttagtacagaccgagtttcaccacgttggccaggctggtcttgaactaccggccttgtgatctgcccactttggcctcccaaagtgctgggattacaagcgtgagccactgtgcatatcctatcctGCAGGTTTTCTAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671565 142 - 190850796 tttttagtagagacatgatttcaccatgctggccacgctggtctcgaactcctgaccttgtgatccacccaccttggcctcccaaagtgatgggattacaggtgtgaaccacagtgcccggccTATAGTGCACATTTTCTAA i calJac3.chr3 C 0 C 0 s cebCap1.NW_016107886v1 1056383 142 - 2196201 tttttagtagagacatgatttcaccatgttggccagactggtctcaaactcctgattttgtgatccacccaccttggcctcccaaagtgatgagattccaggtgtgagccacagtgcctggccTACAGTGCACATTTTCTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442388 142 - 5030052 tttttagtagagacatgatttcaccatgttggtcaggctggcctcgaactcctgaccttgtgatccacccaccttggcctcccaaagtgatgggattacaggtgtgagtcacggtgcctggccTATAGTGCACATTTTCTAA i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e canFam3.chr16 17002618 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=159108.000000 s hg38.chr4_KI270789v1_alt 183033 21 + 205944 AATAGTATAGCCTATGTTAAA s panTro5.chr4 192967945 21 + 194502333 AATAGTATAGCCTATGTTAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852400 21 + 195804263 AATAGTATAGCCTATGTTAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883793 21 + 4876863 AATAGTATAGCCTATGTTAAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050921 21 + 190429646 AATGGTATAGCTTATGTTAAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994585 21 + 189454096 AATGGTATAGCTTATGTTAAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385007 21 - 25927173 AATGGTATAGCTTATGTTAAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3414611 21 + 4669795 AATAGTATAGCTTATGTTAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371656 21 + 135778131 AATGGTATAGCTTATGCTAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838430 21 - 2847728 AATAGTATAGCTTATGTTAAA i manLeu1.NW_012102221v1 C 0 C 0 s calJac3.chr3 189671707 21 - 190850796 AATGGTATAACCTATGTTAAa i calJac3.chr3 C 0 I 824 s cebCap1.NW_016107886v1 1056525 21 - 2196201 AATAGTATAACCTATGTTAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442530 21 - 5030052 AATAGTATAACCTATGTTAAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002618 21 - 59632846 AATAGTATAACTTATGTTAAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1125116.000000 s hg38.chr4_KI270789v1_alt 183054 183 + 205944 ACTTGTCCTAATAGACATTATAAGATTACTTAGACATTGTTTTACTTTAAAGACTGTGTATG--GCTTTCTCACAACCCCAGGGCCATTACTAGTAAGATAAGATTTTCATGGAAGACATTAAAAATCATGTTACACTTTAATAGTGATATTGTTTCAATCTTTCATCACATTAGGTCATTTCCA s panTro5.chr4 192967966 183 + 194502333 ACTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAAGACTGTGTATG--GCTTTCTCATAACCCCAGGGCCATTACTAGTAAGATAAGATTTTCATGGAAGACATTAAAAATCATGTTACACTTTAATAGTGATATTGTTTCAATCTTTCATCACATTAGGTCATTTCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852421 183 + 195804263 ACTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAAGACTGTGTATG--GCTTTCTCATAACCCCAGGGCCATTACTAGTAAGATAAGATTTTCATGGAAGACATTAAAAATCATGTTACACTTTAATAGTGATATTGTTTCAATCTTTCATCACATTAGGTCATTTCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883814 183 + 4876863 ACTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAAGACTGTGTATG--GCTTTCTCATAACCCCAGGGCCATTACTAGTAAGATAAGATTTTCATGGAAGACATTGAAAATCATGTTACACTTTAATAGTGATATTGTTTCCATCTTTCATCACATTAGGTCATTTCCA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189050942 183 + 190429646 ATTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCCGGGGCCATTACTAGTAAGATGAGATTTTCGTGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATACTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994606 183 + 189454096 ATTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCTGGGGCCATTACTAGTAAGATGAGATTTTCGTGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATACTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385028 183 - 25927173 ATTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCCGGGGCCATTACTAGTAAGATGAGATTTTCGTGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATACTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3414632 183 + 4669795 ATTTGTCCTAATAGACATTATAAGATTACTTAGATATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCCAGGGCCATTACTAGTAAGATGAGATTTTTGTGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATATTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371677 183 + 135778131 ATTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCCAGGGCCATTACTAGTAAGATGAGATTTTCATGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATATTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838451 183 - 2847728 ATTTGTCCTAATAGACATTATAAGATTACTTAGACATTATTTTACTTTAAATACTGTGTATG--GCTTTCTCATAGCCCCAGGGCCATTACTAGTAAGATGAGATTTTTGTGGAAGACATTAAAAATCATGTTACACTTAAATAGTGATATTGTTTCAATCTTTCATCACATTGGGTCATTTCCA i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1056546 175 - 2196201 ACTTGTCCTAATAGACATTGTAAGATTACTTAGACATTATTTTACTTTAAAGACTGTGTATG--GCTTTCTCACAGTCCCAGGGTCATTTTTAGTCAGATGAGATTGTCATGAAAGACATTAAAA---ATGTTACACTTAAATAGTGATATTGCTTCAATCTTTCATCATATT-----ATTTCTA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442551 175 - 5030052 ACTTGTCCTAATAGACATTGTAAGATTGCTTAGACATTATTTTACTTTAAAGACTATGTATG--GCTTTCTCACAGTCCCGGGGTCATTTTTAGTAAGATGAGATTGTCATGAAAGACATTAAAA---GTGTTACACTTAAATAGTAATATTGCTTCAATCTTTCATCATATT-----ATTTCTA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002639 179 - 59632846 ACTTGTCCGGATAGACATTGCAAGATCACTTAGA---TATTTTACTTTAAAGACTGTGTGTGTAGCTTTCTCATGGCTCTAGTATCTTTTCCAGTAAAATGAGACTTTTATGAAAGACATTGAAAATCATGTTGCATTTAAATAGTGATA---TTTAAATCTTTAATCAGGCTAGGTCATTTTCA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e dasNov3.JH570353 1507676 1158 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=860884.000000 s hg38.chr4_KI270789v1_alt 183237 141 + 205944 TTTAGAAAATTTGATATTCATATGGA-ACCTTTTTGTATC-----AAAAATTATCCACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTTCTCTTAA-GTCAGCTAAGGTAATCATGCATCTTCCTTGATTCTTT s panTro5.chr4 192968149 141 + 194502333 TTTAGAAAATTTGATATTCATATGGA-ACCTTTTTGTATC-----AAAAATTATCCACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTTCTGTTAA-GTCAGCTAAGGTAATCATGCATCTTCCTTGATTCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852604 141 + 195804263 TTTAGAAAATTTGATATTCATATGGA-ACCTTTTTGTATC-----AAAAATTATCCACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTTCTGTTAA-GTCAGCTAAGGTAATCATGCATCTTCCTTGATTCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3883997 141 + 4876863 TTTAGAAAATTTGATATTCATATGGA-ACCTTTTTGTATC-----AAAAATTATCCACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTTCTGTTAA-GTCAGCTAAGGTAATCATGCATCTTCCTTGATTCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189051125 141 + 190429646 TTTAGAAAATTTGATATTCATATAGA-AATTTTTTGTATC-----AAAAATTATCTACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTCCTCTTAA-GTCAGCTAAGGTAATCACGCATCTTCCTTCATTCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994789 141 + 189454096 TTTAGAAAATTTGATATTCATATAGA-AATTTTTTGTATC-----AAAAATTATCTACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTCCTCTTAA-GTCAGCTAAGGTAATCACGCATCTTCCTTCATTCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385211 141 - 25927173 TTTAGAAAATTTGATATTCATATAGA-AATTTTTTGTATC-----AAAAATTATCTACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTCCTCTTAA-GTCAGCTAAGGTAATCACACATCTTCCTTCATTCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3414815 141 + 4669795 TTTAGCAAATTTGATATTCATATAGA-ACTTTTTTGTATC-----AAAAAATATCTACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTCCTCTTAA-GTCAGCTAAGGTAATCACGCATCTTCCTTCATTCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134371860 141 + 135778131 TTTAGAAAATTTGATATTCATATAGA-ACTTTTTTGTATC-----AAAAATTATCTACATGTGCTTCAATTTTAGAACTTAACTACTTTCATGCAAG----TAGTTCTTCTTAA-GTCAGCTAAGGTAATCACGCATCTTCCTTCATTCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838634 141 - 2847728 TTTAGCAAATTTGATATTCATATAGA-ACTTTTTTGTATC-----AAAAATTATCTACATGTGCTTCAATTTTAGAACTGAACTACTTTCATGCAAG----TAGTTCCTCTTAA-GTCAGCTAAGGTAATCACGCATCTTCCTTCATTCTTT i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1056721 137 - 2196201 TTTAGAAAATTTGATATTCTTATATA-AGTTTTTTGTATC-----AAAAATTACCCACATTTGCTTCAATTTTAGAACTTAACTACTTGCATGCAAG----TAATTTCTCTTAA-GTCAGCTAAGA----CATGCATCTTCCTTGATTCTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442726 121 - 5030052 TTTAGAAACT-------------------TTTTTTGTATC-----AAAAATTACCTACATTTGCTTCAATTTTAGAACTTAACTACTTGCATGCAAG----TGATTTCTCTT---GTCAGCTAAGATGATCATGCATCTTCCTTGATTCTTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002818 148 - 59632846 TTTAG-AAATCTGACATTCATATAGA-A-CATTATGTATCTTCAAAAAAAATGCCTACATTTGTTTTAATTTCCAGATTTAACGACTTTTGTGTATGAGCAGAGTTCCTCTTTA-GCTCGCTAACGTAATCACACATCTTCCTTTACTCTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1508834 139 - 2520184 TTTAGAAAATCTGAGATTCATTTGTAGAATATTCCATATC-----AAAAA-TGCCTCCATTTGCTTCAATTCCAGAACTT---TGCTTACCTGCCAG----TGGAGCTCCTCGAGGTCAGCTCTCAGGATCTCCCGTCCTCCTTCATTGCTT i dasNov3.JH570353 I 1158 I 1863 e calJac3.chr3 189671728 824 - 190850796 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=671380.000000 s hg38.chr4_KI270789v1_alt 183378 113 + 205944 -------------------aagactcccctgccctgaaatatctcccctaaaagtctgacacaatTATAGAACAAAG-GATACTATGTCTTATTAAGAAGTTTAATCTCATCGTTATTAATAAGTAAATATGt s panTro5.chr4 192968290 113 + 194502333 -------------------aagactcccctgccctgaaatagctcccctgaaagtctgacacaatTATAGAACAAAG-GATACTATGTCTTATTAAGAAGTTTAATCTCATTGTTATTAATAAGTAAATATGt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852745 113 + 195804263 -------------------aagactcccctgccctgaaatagctcccctgaaagtctgacacaatTATAGAACAAAG-GATACTATGTCTTATTAAGAAGTTTAATCTCATTGTTATTAATAAGTAAATATGt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884138 113 + 4876863 -------------------aagactcccctgccctgaaatagctcccctgaaagtctgacacaatTATAGAACAAAG-GATACTACGTCTTATTAAGAAGTTTAATCTCATTGTTATTAATAAGTAAATATGt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189051266 113 + 190429646 -------------------aagactcccctgcactaaaatagctcccctggaagtctgacacgatTATAGAAGAAGG-GATACTATGTCTTATTAAGAAGTTTAATCTCATCATTATTAATAAGTAAATATGt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187994930 113 + 189454096 -------------------aagactcccctgcactaaaatagctcccctggaagtctgacacgatTATAGAAGAAGG-GATACTATGTCTTATTAAGAAGTTTAATCTCATCATTATTAATAAGTAAATATGt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385352 113 - 25927173 -------------------aagactcccctgcactaaaatagctcccctggaagtctgacacgatTATAGAAGAAGG-GATACTATGTCTTATTAAGAAGTTTAATCTCATCATTATTAATAAGTAAATATGt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3414956 113 + 4669795 -------------------aagactctcctgccctaaaatagctcccctggaagtctgatacgatTATAGAAGAAGA-GATACTATGTCTTATTAAGAAGTTTAGTCTCATCATTATTAATAAGTAAATATGt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372001 113 + 135778131 -------------------AAGACTCCCCTGCCCTAAAATAGCTCCCCTGGAAGTCTGACAGGATTATAGAAGAAGG-GATACTATGTCTTATTAAAAAGTTTAATCTCATCATTATTAATAAGTAAATATGt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838775 113 - 2847728 -------------------aagactctcctgccctaaaatagctcccctggaagtctgatacgatTATAGAAGAAGG-GATACTATGTCTTATTAAGAAGTTTAATCTCATCATTATTAATAAGTAAATATGt i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1056858 113 - 2196201 -------------------AAGACTCCTCTTCCCTGAAATAGGTCCCCTGAAAGTCTGACAAAATCCTAGAAGACGG-CGTACCATGTCATATTAAGAAGTTTAATCTCATCGTTATTAATAAGTAAATATGt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442847 113 - 5030052 -------------------AAGACTCCTCTTCCCTGAAACAGCTCCCCTGAAAGTCTGACACAATGACAGAAGAAGG-CGTACTATGTCATATTAAGAAGTTTAGTCTCCTCATTATTCATAAGTAAATATGt i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17002966 133 - 59632846 TTTTTTTCCTTTACTCTTGAAGACCACCATGTCTTGAAATAGCACCTCTGAAAGTCTGACACAGTTATAGAAAAGAGCCATAAAATATCTTATTAAGGGATTTAATCTCACAATCATTAATATGTAAATATGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e dasNov3.JH570353 1508973 1863 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1349725.000000 s hg38.chr4_KI270789v1_alt 183491 254 + 205944 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccacgtgttgtgggcaggacccggtgggagatgattgaatcatgg-ggtgggtctttcctatgctgttcttgtgatagtgaatgggtttc--------tgatggt----tttaaaatggggagttcccctgcacaagctctctctttgcctgttgccatccatgtaagatgtgacttgctcctccttgccttccactgtgattgtgaggcct s panTro5.chr4 192968403 254 + 194502333 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccacgtgttgtgggcaggacctggtgggagatgattgaatcatgg-ggtgggtctttcctatgctgttcttgtgatagtgaatgggtttc--------tgatggt----tttaaaagggggagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttccgctgtgattgtgaggcct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192852858 254 + 195804263 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccacgtgttgtgggcaggacctggtgggagatgattgaatcatgg-ggtgggtctttcctatgctgttcttgtgatagtgaatgggtttc--------tgatggt----tttaaaagggggagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttccgctgtgattgtgaggcct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884251 254 + 4876863 gatatggtttggctctgtgtcctctcccaaatctcatcttgtagctcccataattccacgtgttgtgggcaggacctggtgggagatgattgaatcatgg-ggcgggtctttcctatgctgttcttgtgatagtgaatgggtttc--------tgatggt----tttaaaagggggagttcccctgcacaagctctctctttgcctcttgccatccatgtaagatgtgacttgctcctccttgccttccactgtgattgtgaggcct i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189051379 261 + 190429646 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggacctggtgggagatgattgaatcatgg-ggcaggtctttcctgtgctgttctcatgatagtgaatgggtttcatgagat-ctatggt----ttcaaaaatgagagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgttcctctttgtcttccactatgattgtgaggcct i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995043 260 + 189454096 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggacctggtgggagatgattgaatcatgg-ggcaggtctttcctgtgctgttctcatgatagtgaatgggtttcatgagat-ctatggt----ttcaaaaatgagagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgttcctctttgtctt-caccatgattgtgaggcct i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385465 261 - 25927173 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggacctggtgggagatgattgaatcatgg-ggcaggtctttcctgtgctgttctcatgatagtgaatgggtttcatgagat-ctatggt----ttcaaaaatgagagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgttcctctttgtcttccactataattgtgaggcct i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415069 261 + 4669795 gatatagtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggacctggtaggagatgattgaatcatgg-ggcgggtctttcctgtgctgttctcatgatagtgaatgggtttcatgagat-ctatggt----ttcaaaaatgagagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgttcctccttgtcttccactatgattgtgaggcct i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372114 260 + 135778131 gatatggtttggctc-gtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggacctggtgggagatgattggatcatgg-ggcaggtctttcctgtgctgttctcatggtagtgaatgggtttcatgagtt-ctgtggt----ttcaaaaatgagagttcccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgttcctccttgtcttccactatgattgtgaggcct i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2838888 261 - 2847728 gatatggtttggctctgtgtcccctcccaaatctcatcttgtagctcccataattccatgtgttgtgggagggagctggtaggagatgattgaatcatgg-ggcgggtctttcctgtgctgttctcatgatagtgaatggatttcatgagat-ctatggt----ttcaaaaatgagagttcccctgcacaagctctctcgttgcctgctgccatccatgtaagatgtgacttgttcctccttgtcttccactatgattgtgaggcct i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1056971 262 - 2196201 ggtctgttttggctctgtgtccccacacagatctcatcttgtagctaccataattccatgtgttgtgggaaggacctggtggcaggtgactgaatcatggggctggatctttcccatgctgttctcatcatagtgaaggagtctcacgaggtctgatggt----tttaaaagggggagtttccctgcacaagcgttttctttgtccactgccatccatgtaagacatgacttgctcctccttgccttgt-ccgtgattgtgaggcct i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3442960 266 - 5030052 ggtctggttgggctctgtgtccccacccagatctcatcgtgtagctcccataattccatgtgttgtgggagggacctggtgggaggtgattgaatcatggcggtgggtctttcccatgctgttctcgtcatagtgaaggagtctcacgaggcctgatggtttaatttaaaaggaggagtttccctgcacaagtgttttctttgtccgctgccatccatgtaagacatgacttgctcctccttgccttct-ccatgattatgaggcct i aotNan1.NW_018492112v1 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e dasNov3.JH570353 1508973 1863 - 2520184 I e canFam3.chr16 17003099 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e nomLeu3.chr7b 112771936 4140 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=148812.000000 s hg38.chr4_KI270789v1_alt 183745 20 + 205944 ccccagccatgtggaactgt s panTro5.chr4 192968657 20 + 194502333 ccccagccatgtggaactgt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853112 20 + 195804263 ccccagccatgtggaactgt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884505 20 + 4876863 ccctagccatgtggaactgt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776076 20 + 115148730 ccccagccatgtggaactgt i nomLeu3.chr7b I 4140 C 0 s rheMac8.chr5 189051640 20 + 190429646 ccccagccatgtggaactgt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995303 20 + 189454096 ccccagccatgtggaactgt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385726 20 - 25927173 ccccagccatgtggaactgt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415330 20 + 4669795 ccccagccatgtggaactgt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372374 20 + 135778131 ccccagccatgtggaactgt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839149 20 - 2847728 ccccagccatgtggaactgt i manLeu1.NW_012102221v1 C 0 C 0 s cebCap1.NW_016107886v1 1057233 20 - 2196201 ccccagccatgtggaactgt i cebCap1.NW_016107886v1 C 0 I 564 s aotNan1.NW_018492112v1 3443226 20 - 5030052 ccccagccatgtggaactgt i aotNan1.NW_018492112v1 C 0 I 566 e calJac3.chr3 189671728 824 - 190850796 I e dasNov3.JH570353 1508973 1863 - 2520184 I e canFam3.chr16 17003099 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=369086.000000 s hg38.chr4_KI270789v1_alt 183765 80 + 205944 aa-ggccaataagcttctttcttttgaaaattgcccagtctcggttatgtctttatcagcaatgtgaaaacagactaatac s panTro5.chr4 192968677 80 + 194502333 aa-ggccaataagcttctttcttttgaaaattgcccagtctcggttatgtctttatcagcaatgtgaaaacagactaatac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853132 80 + 195804263 aa-ggccaataagcttctttcttttgaaaattgcccagtctcggttatgtctttatcagcaatgtgaaaacagactaatac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884525 80 + 4876863 aa-ggccaataagcttctttcttttgaaaattgccctgtctcagttatgtctttatcagcaatgtgaaaacagactaatac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776096 79 + 115148730 aagggccaataagcttctt--ctttgaaaattgcacagtctcggttatgtctgtatcagcagtgtgaaaacagactaatac i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189051660 80 + 190429646 aa-ggccaataagcttctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995323 80 + 189454096 aa-ggccaataagcttctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385746 80 - 25927173 aa-ggccaataagctgctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415350 80 + 4669795 aa-ggccaataaccttctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372394 80 + 135778131 aa-agtcaataagcttctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839169 80 - 2847728 aa-ggccaataagcttctttcttttcaaaattgcccagtctcagttatgtctttatcagcagtgtgaaaacagactaataA i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1508973 1863 - 2520184 I e canFam3.chr16 17003099 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=38766.000000 s hg38.chr4_KI270789v1_alt 183845 7 + 205944 aATACGC s panTro5.chr4 192968757 7 + 194502333 aATATGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853212 7 + 195804263 aATATGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884605 7 + 4876863 aATACGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776175 7 + 115148730 aATATGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189051740 7 + 190429646 AATATGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995403 7 + 189454096 AATATGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385826 7 - 25927173 AATATGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415430 7 + 4669795 AATATGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372474 7 + 135778131 AATATGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839249 7 - 2847728 AATATGC i manLeu1.NW_012102221v1 C 0 C 0 s dasNov3.JH570353 1510836 7 - 2520184 AATAGGC i dasNov3.JH570353 I 1863 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e canFam3.chr16 17003099 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1335809.000000 s hg38.chr4_KI270789v1_alt 183852 262 + 205944 ATTTTTCTTGAGTATA-G-AATTAACCTGTTATATTTTTCCTAACATAGAGG-AGGTAGTCTGGAGAGATTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGAGAGAAACAGAGAGAGAGGTA-GTGCAGTAAAGCTTCCA-----TCTGATGCATAGCTAGTGTGAGGACA--CGTGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTGATGATCTACCCTG s panTro5.chr4 192968764 262 + 194502333 ATTTTTCTTGAGTATA-G-AATTAACCTGTTATATTTTTCCTAACATAGAGG-AGGTAGTCTGGAGAGATTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGAGAGGGGTA-GTGCAGTAAAGCTTCCA-----TCTGATGCATAGCTAGTGTGAGGACA--CGTGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTGATGATCTAGCCTG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853219 262 + 195804263 ATTTTTCTTGAGTATA-G-AATTAACCTGTTATATTTTTCCTAACATAGAGG-AGGTAGTCTGGAGAGATTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGAGAGGGGTA-GTGCAGTAAAGCTTCCA-----TCTGATGCATAGCTAGTGTGAGGACA--CGTGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTGATGATCTAGCCTG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884612 262 + 4876863 ATTTTTCTTGAGTATA-G-AATTAACCTGTTATATTTTTCCTAACATAGAGG-AGGTAGTCTGGAGAGATTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGAGAGAGGTA-GTGCAGTAAAGCTACCA-----TCTGATGCATAGCTAGTGTGAGGACA--CGTGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTGATGATTTACCCTG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776182 262 + 115148730 ATTTTTCTTGAGTATA-G-AATTAACCTGTTATATTTTTCCTAACACAGAGG-AGGTAGTCTGGAGAGATTTGAAAGAAACACAGAGGTACGATTAATTTATTAGCCAAGTTCTTCATGATCTCCTAAGACAGAGACAGAGAGAGAGGTA-GTGCAGTGAAGCTTCCA-----TCTGATGCATGGCTAGTGTGACGACA--TGTGCCTAGAGGCAGAACCAGGGAACTGGAAAATAGGAACATCTGTATTAATTTTGCTGATGATCTATCCTG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189051747 246 + 190429646 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAACACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGGGAGAGGTA-GTGCAGTGAAGATTCCA-----TCTGATGCATGGCCAGTGTGAGGACG--CATGCCTAGAGGCAGAATCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995410 246 + 189454096 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAACACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGGGAGAGGTA-GTGCAGTGAAGATTCCA-----TCTGATGCATGGCCAGTGTGAGGACG--CATGCCTAGAGGCAGAATCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24385833 246 - 25927173 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAACACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGAGAGAGGTA-GTGCAGTGAAGATTCCA-----TCTGATGCATGGCCAGTGTGAGGACG--CATGCCTAGAGGCAGAATCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415437 245 + 4669795 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAATACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGGCAAGTTCTTCAGGATCTCCTAAG-CAGAGACAGAGAGAGAGGTA-GTACAGTGAAGCTTCCA-----TCTGATGCATGGCCAGTGTGAGGACA--CATGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372481 246 + 135778131 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAACACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGCCAAGTTCTTCAGGATCTCCTAAGACAGAGACAGAGAGAGAGGTA-GTGCAGTGAAGATTCCA-----TCTGATGCATGGCCAGTGTGAGGACA--CATGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839256 245 - 2847728 ATTTTTCTTGAGTATA-G-AATTAACCTGTTTTATTTTTCCTAACACAGAGG-----------------TTTGAAAGAAACACAGAGGTACAATTAATTTATTAGGCAAGTTCTTCAGGATCTCCTAAG-CAGAGACAGAGAGAGAGGTA-GTACAGTGAAGCTTCCA-----TCTGATGCATGGCCAGTGTGAGGACA--CATGCCTAGAGGCAGAACCAGGGAACTGGGAAATAGGAACATCTGTATTAATTTTGCTCATGATCTATCCTG i manLeu1.NW_012102221v1 C 0 C 0 s canFam3.chr16 17003099 245 - 59632846 ATTTCGCTTGGGGATA-GAAATTAACCTACTATGCTTTTTGTGATATAGAAGGAGGCAGTCTGGAGATATTTGAAGGAAACATGAAGGCACAATTAATTTATTAAC-------------AGCTCTTAGGATAGATACAAGGAAAGAAGCAGGTACACTTAAACTTTCA-----TCTGATGCAACACTGGGATGAGGACATTTGTGCCTAGAGGCAGAAGTAAGAAAATAAGAAA---------ATGTAATAATTTTCCTGATGATGTATCCTA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1510843 243 - 2520184 ATTTTCCTCGGGTATACG-GACCAACCTGTTGGGGTTTTCTTAACACGGAAGGAAGCAGTCTGGCGAGACTGGAAAGAAATGCAGACACA-AGTTAGTTTATTAGCAGAG---GCCAGGATGGACCCTGGCA-AGATGGAAGAAATGGCA----------AGTGTTCAGACGTTCTGACGCCAGGCT----TGAAG-TG--TGCACCTGGAGGCGACAGCAGGGATACGGGAAA-------ATCTGTGACATTTCTACCCATGATCTGGTCTG i dasNov3.JH570353 C 0 I 1 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=115824.000000 s hg38.chr4_KI270789v1_alt 184114 23 + 205944 AACACATGCTTTAtgttatgggt s panTro5.chr4 192969026 23 + 194502333 AACACATGCTTTAtgttatgggt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853481 23 + 195804263 AACACATGCTTTAtgttatgggt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884874 23 + 4876863 AACACATGCTTTAtgttatgggt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776444 23 + 115148730 AACACCTGCTTTAtgttatggtt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189051993 23 + 190429646 AACACATGCTTTACGTtatgatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995656 23 + 189454096 AACACATGCTTTACGTtatgatt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24386079 23 - 25927173 AACACATGCTTTACGTtatgatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415682 23 + 4669795 AACACATGCTTTACGTtatggtt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372727 23 + 135778131 AACACATGCTTTACGTtatggtt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839501 23 - 2847728 AACACATGCTTTACGTtatggtt i manLeu1.NW_012102221v1 C 0 C 0 s canFam3.chr16 17003344 21 - 59632846 AATACATGCTTTA--TTATAGGT i canFam3.chr16 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1511086 1 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=669800.000000 s hg38.chr4_KI270789v1_alt 184137 146 + 205944 tggctgtgtccccacccaaatctcttcttgaatgaattcccacgcattgtgggagggacctggtgggaggtgattggatcatgggggcaggtcttacctgtgctgttctcatgatagtgaatgagtctctcgagatctgatggttt s panTro5.chr4 192969049 142 + 194502333 tggctgtgtccccacccaaatgtcttct----tgaattcccacgtgttgtgggagggacctggtgggaggtgattggatcatgggggcaggtcttacctgtgctgttctcatgatagtgaatgagtctctcgagatctgatggttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853504 142 + 195804263 tggctgtgtccccacccaaatgtcttct----tgaattcccacatgttgtgggagggacctggtgggaggtgattggatcatgggggcaggtcttacctgtgctgttctcatgatagtgaatgagtctctcgagatctgatggttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3884897 142 + 4876863 tggctgtgtccccacccaaatctcttct----tgaattcccacgtgttgtgggagggacctggtgggaggtgattggatcatgggggcaagtcttacctgtgctgttctcatgatagtgaatgagtctctcgagatctgatggttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776467 142 + 115148730 tggctgtgtccccacccaaatctcttct----tgaattcccacgtgttgtgggagggacctggtgggaggtgactggatcgtgggggcaggtcttacttgtgctgttctcaagatagtgaatgagtctcttgagatctgatggttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189052016 142 + 190429646 tggctgtgtccccacccaaatctcttct----tgatttcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctatgctgttctcatgatagtgagtaagtctcatgagatctgatggttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995679 142 + 189454096 tggctgtgtccccacccaaatctcttct----tgatttcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctatgctgttctcatgatagtgagtaagtctcatgagatctgatggttt i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24386102 142 - 25927173 tggctgtgtccccacccaaatctcttct----tgatttcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctatgctgttctcatgatagtgagtaagtctcatgagatctgatggttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415705 142 + 4669795 tggctgtgtccccacccaaatctcttct----tgaattcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaggtctttcctatgctgttctcatgatagtgagtaagtctcatgagatctgatggttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372750 138 + 135778131 tggctgtgtccccacccagatctcttct----tgaattcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaggcctttcctatgctgttctcatgat----agtaagtctcatgagatctgatggttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839524 142 - 2847728 tggctgtgtccccactcaaatctcttct----tgaattcccatgtgttgtgggagggacctggtgggaggtgattgaatcatgggggcaaatctttcctatgctgttctcatgatagtgagtaagtctcatgagatctgatggttt i manLeu1.NW_012102221v1 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e colAng1.NW_012116221v1 937957 696 + 2368649 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=3735469.000000 s hg38.chr4_KI270789v1_alt 184283 671 + 205944 taaaagggggagtttccccgcacaagctctctctttgcctgccaccatccatgtaagatgtgacttgctcttccttgccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttttcttcccagtctcgggtatgtctttatcagcagtgtgaaaatggactaatacagtaaattggtaccagtagagtagggtgctgctgaa---atacccaaaaatgtggaagcgactttggaactgggtaacaggcagaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgttgaatggctttgccccaaatgctgatagcgatatagacaatgaagtccaggttgaggtggtcccag-attaaatgaggaacttgtagg-aactggagcaaaggtgactcttgttatgttttagcaaagacactggtgacattttgccccttccctagagatttgttgaactttgaacttgagagagatgatttagggtatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaagtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaaaatttgtagcctgacaaaacaata s panTro5.chr4 192969191 671 + 194502333 taaaagggggagtttccccgcacaagctctctctttgcctgccgccatccatgtaagatgtgacttgctcttccttgccttctgccgtgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttttcttcccagtctcaggtatgtctttatcagcagtgtgaaaatggactaatacagtaaattggtaccagtagagtagggtgctgctgaa---atacccaaaaatgtggaagcgactttggaactgggtaacaggcagaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgttgaatggctttgccccaaatgctgatagcaatatagacaatgaagtccaggttgaagtggccccag-atgaaatgaggaacttgtagg-aactggagcaaaggtgactcttgttatgttttagcaaagacactggtgacattttgccccttccctagagatttgtttaactttgaacttgagagagatgatttagggtatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaaaatttgtagcctgacaaaacaata i panTro5.chr4 C 0 C 0 s panPan2.chr4 192853646 671 + 195804263 taaaagggggagtttccccgcacaagctctctctttgcctgccgccatccatgtaagatgtgacttgctcttccttgccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtctattaaacctctttttcttcccagtctcaggtatgtctttatcagcagtgtgaaaatggactaatacagtaaattggtaccagtagagtagggtgctgctgaa---atacccaaaaatgtggaagcgactttggaactgggtaacaggcagaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgttgaatggctttgccccaaatgctgatagcgatatagacaatgaagtccaggttgaagtggccccag-atgaaatgaggaacttgtagg-aactggagcaaaggtgactcttgttatgttttagcaaagacactggtgacattttgccccttccctagagatttgtttaactttgaacttgagagagatgatttagggtatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaaaatttgtagcctgacaaaacaata i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3885039 671 + 4876863 taaaggggggagtttccccgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcttccttgccttctgccatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttttcttcccagtctcgggtatgtctttatcagcagtgtgaaaatggactaatacagtaaattggtaccagtagagtaggatgctgctgaa---atacccaaaaatgtggaagcgactttggaactgggtaacaggcagaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgttgaatggctttgccccaaatgctgatagcgatatagacaatgaagtccaggttgaagtggccccag-atgaaatgaggaacttgtagg-aactggagcaaaggtgactcttgttatgttttagcaaagacactggtgacattttgccccttccctagagatttgttgaactttgaacttgagagagatgatttagggtatctggcagaagaaatttctaagcagcaaagcattcaagaggcaacttaggtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaaaatgtgtagcctgacaaaacaata i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112776609 673 + 115148730 taaaagggggagtttccctgcacaagctctctctttgcctgccacaatccatgtaagatgtgacttgctcctccttgccttccgccatgattgtgaggcct--ccagccatgtggaactgtgagtccattaaacctctttttcttctcagtctcgggtatgtctttatcagcagtgtgaaaatggactaatatagtaaattggtaccagtagagtagggtgctgctgaaaagatacccaaaaatgtggaagcgactttggaactgggtaacaggcagtggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagaaatttgttgaatggctttgccccaagtggtgacagtgatatagacaatgaagtccaggttgaagtggtcccag-atgaaatgaggaacttgttggaaactggagcaaaggtgactcttgttatgttttagcaaagacactggtggcattttgcccctgccctagagatttgttgaactttgaacttgagagagatgatttagggtatccagcagaaaaaatttctaagtagcaaagcattcaagaggtgacttaggtgctgtcgaggcattcagttttaaaagggaagcagaacataaaagttcataaaatttgtatcctgacaaaacaata i nomLeu3.chr7b C 0 M 274 s rheMac8.chr5 189052158 675 + 190429646 gaaaagggagggtttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-accatgattgtgaggcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccatttttgggtatgtatttaccagcagtgtgaaaatggtccaatacaATATattggtgccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaacttgggaactgggtaaccgcctgaggttggaaaaatgtggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcgaagtggtcccagaaggaaatgaggaacttgttgggaactggagcaaagattactcttgttatgttttagcaaagacactggtggtgttttgcccctgccctagagatttgttgaactttgaacttgagagaggtgatttagattatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtgctgttgaggcattcagttttaaaagggaagcagagtataaaagttcagaagatttgcagcctgacaaaacaata i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187995821 675 + 189454096 gaaaagggagggtttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-accatgattgtgaggcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccgtttttgggtatgtatttaccagcagtgtgaaaatggtccaatacagtatattggtgccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaacttgggaactgggtaaccgcctgaggttggaaaaatgtggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcaaagtggtcccagaaggaaatgaggaacttgttgggaactggagcaaagattactcttgttatgttttagcaaagacactggtggtgttttgcccctgccctagagatttgttgaactttgaacttgagagaggtgacttagattatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtgctgttgaggcattcagttttaaaagggaagcagagtataaaagttcagaaaatttgcagcctgacaaaacaata i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24386244 675 - 25927173 gaaaagggagagtttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-accatgattgtgaggcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccatttttgggtatgtatttaccagcagtgtgaaaatggtccaatacagtatattggtgccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaactttggaactgggtaaccgcctgaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcaaagtggtcccagaaggaaatgaggaacttgttgggaactggagcaaagattactcttgttatgttttagcaaagacactggtggtgttttgcccctgccctagagatttgttgaactttgaacttgagagaggtgatttagattatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtgctgttgaggcattcagttttaaaagggaagcagagtataaaagttcagaaaatttgcagcctgacaaaacaata i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3415847 673 + 4669795 gaaaagggggagtttccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-accatgattgtgaagcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccatttttgggtatgtatttaccagcagtgtaaaaatggtccaatacagtatattggtaccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaactttggaactgggtaaccgtctgaggttggaaaaat-tggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcaaagtggtcccagaaggaaatgaggaacttgttgggaactggagcaaagatgactcttgctatgttttagcaaagacactgggggcattttgcccctgccctagagatttgttgaactttgaacttgagagaggtgatttaggttatctggcagaagaaacttctaagcagcaaagcattcaagaggtgacttaggtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaa-atttgcagcctgacaaaacaata i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134372888 671 + 135778131 gaaaagggggagtttccttgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgcctt----catgattgtgaggcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccatttttgggtatgtatttaccagcagtgtgaaaatggtccaatacagtatattggtaccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaactttggaactgggtaaccgtctgaggttggaaaaatttggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagattggtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcaaagtggtcccagaaggaaatgaggaacctgttgggaactggagcaaagatgactcttgttatgttttagcaaagacactggtggcattttgcccctgccctagagatttgttgaactttgaacttgagagaggtgatataggttatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtgctgttgaggcattcagttttaaaagggaagcagagcataaaagttcagaa-atttgcagcctgacaaaacaata i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2839666 673 - 2847728 gaaaagggggagttgccctgcacaagctctctctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-accatgattgtgaggcctccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccatttttgggtatgtatttaccagcagtgtgaaaatggtccaatacagtatattggtaccagtagagtagggcactgctcaaaagatacccaaaaatgtggaagcaactttggaactgggtaaccgtctgaggttggaaaaa-ttggagggctcagaagaagacaggaaagtgtggaaaagtttggaactccctagagatttgtttaatggctttgccccaattgctgatagtgatatagacaatgaagtccaggtcaaagtggtcccagaaggaaatgaggaacttgttgggaactggagcaaagatgactcttgttatgttttagcaaagacactggtggcattttgcccctgccttagagatttgttgaactttgaacttgagagaggtgatttaggttatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtactgtcgaggcattcagttttaaaagggaagcagagcataaaagttcagaa-atttgcaacctgacaaaacaata i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 938653 668 + 2368649 taaaaaggggggtttccctgcacaagctctgtctttgcctgctgccatccatgtaagatgtgacttgctcctccttgccttc-gccatgattgtgagacttccccaaccatgtggaactgtgagtgcattaaacctctttttcttcccagttttgggtatgtatttaccagcagcatgaaaatggtccaatacagtaaattggtaccagtagagtagggcactgctcaaaagatacccaaaaatgtagaagtgactttggaattgggtaatagtctgaggttggaaaaatgtggagggctcagaagaagacaggaaagtgtgggaaagtttggaactccctagagatttgtttaatggctttgccccaattgc-------aatatagacaatgaagtccaggtcaaagtggtcccagaagggaatgaggaacttgttgggaactggagcaaagattactcttgttatgttttagtaaagacactggtggcattttgcccctgccctagagatttgttgaactttgaacttgagagaggtgatttaggttatctggcagaagaaatttctaagcagcaaagcattcaagaggtgacttaggtactgttgaggcattcagttttaaaaggggggcagagcataaaagtttagaaaatttgcagtctgacaaaacaaca i colAng1.NW_012116221v1 I 696 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1336056.000000 s hg38.chr4_KI270789v1_alt 184954 299 + 205944 gaaaagaaaaccctggttgggcatggtggctcacgcctgtaat-ccagcactttggaaggccgaggtggatggatcacgaggtcaggcattcgagaccagccctggccaacataatgaaaccccgtttctactaaaaatgcaaaaaattagccaggcgtggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacacaggaggcagaggttacagtgagccgagatagcgccactgcactccagcccgggcaatggtgtgagactaggtctcaaaa s panTro5.chr4 192969862 298 + 194502333 gaaaagaaaaccctggttgggcacggtggctcacacctgtaatcccagcactttggaaggccgaggtggatggatcacgaggtcaggcatttgagaccag-cctggccaacataatgaaaccccgtctctactaaaaatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacacaggaggcagaagttgcagtgagccgagatcgcaccactgcactccagcccgggcaacagtgtgagactaggtctc-aaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192854317 297 + 195804263 gaaaagaaaaccctggttgggcacggtggctcacacctgtaatcccagcactttggaaggccgaggtggatggatcacgaggtcaggcatttgagaccag-cctggccaacataatgaaaccccgtctctactaaaaatacaaaaaattagccaggtgtggtggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacacaggaggcagaagttgcagtgagccgagatcgcaccactgcactccagcccgggcaacagtgtgagactaggtct--aca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3885710 296 + 4876863 gaaaagaaaaccctggttgggcacggtggctcacacctgtaatcccagcactttggaaggccgaggtggatggatcacgaggtcaggcattcgagaccag-cctggccaacataatgaaaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcagatgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacacaggaggcagaggttgcagtgagccgagatcgtgccactgcactccagcccgggcaacggagtgagactaggtctc---a i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189052833 298 + 190429646 gaaaagaaggccctggccaggtgcagtggcttatgcctgtagtcccagcactttgggaggctgaagtggatagatcacgaggtcagacattcgagaccag-cctggccaacataatgaaaccccgtctctagtaaaaatacaaaaaattagccaggcctggtggcaggtgcctgcaatcccagctactcagcaggctgaggcaggagaattgtttgaacctggaaggcagaggttgcagtgagttgagatcacgccactgcactccagcccaggcaacagtgtgagattctgtctc-aaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187996496 298 + 189454096 gaaaagaaggccctggccaggtgcagtggcttatgcctgtagtcccagcactttgggaggctgaagtggatagatcacgaggtcagacattcgagaccag-cctggccaacataatgaaaccccgtctctagtaaaaatacaaaaaattagccaggcctggtggcaggtgcctgcaatcccagctactcaggaggctgaggcaggagaattgtttgaacctggaaggcagaggttgcagtgagttgagatcacgccactgcactccagcccaggcaacagtgtgagattctgtctc-aaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24386919 298 - 25927173 gaaaagaagaccctggccaggtgcagtggcttatgcctgtagtcccagcactttcggaggctgaagtggatagatcacgaggtcagacattcgagaccag-cctggccaacataatgaaaccccatctctagtaaaaatacaaaaaattacccaggcctggtggcaggtgcctgcaatcccagctactcaggaggctgaggcaggagaatcgtttgaacccagaaggcagaggttgcagtgagccgagatcacaccactgcactccagcccaggcaacagtgtgagattctgtctc-aaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3416520 298 + 4669795 gaaaagaaggccctggccaggtgcggtggctcacgcctgtagtcccagcactttgggaggccgaggtggatagatcatgaggtcagacattcgagaccaa-cctggccaacataatgaaaccccatctctagtaaaaatacaaaaaattagccaggcctggtggcaggtgcgtgcaatcccagctactcaggaggctgaggcaggagaattgcttgaacctggaagccagaggttgcagtgagtcgagatcacgccactgcactccaacccaggcaacagtgtgagattccgtctc-aaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134373559 298 + 135778131 gaaaagaaggccctggccaggtgtggtggcttacgcctgtagtctcagcactttgggaggccgaggtggatagatcacaaggtcagacattcaagaccag-cctggccaacataatgaaaccccatctctagtaaaaatacgaaaaattagccaggcctggtggcaggtgcctgcaatcccagctactcaggaggctgaggcaggagaattgcttgaacctggaaggcagaggttgcagtgagtcgagatcgtgccactgcactccagcccaggcaacagtgtgagattccatctc-aaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2840339 298 - 2847728 gaaaagaaggccctggccaggtgtggtggctcacgcctgtagtcccagcactttgggaggccgaggtggatagatcatgaggtcagacattcgagaccag-cctggccaacataatgaaaccccatctgtagtaaaaatacaaaaaattagccaggcctggtggcaggtgcgtgcaatcccagctactcaggaggctgaggcaggagaattgcttgaacctggaagccagaggttgcagtgagtcgagatcacgccactgcactccagcccaggcaacagtgtgagattccgtctc-aaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 939321 293 + 2368649 gaaaagaaggccctggccaggtgcggtggctaacgcctgtagtcccagcactttgggaggccaagatgggtggatcacgaggtcaggcattcgagaccag-cctggccgacataatgaaaccccgtctctactaaaaatacaaa-----agccaggtctggtggcaggtgtctgcaatcccagctactcaggaggctgaggcaggagaattgcttaaacctggaaggcagaggttgcagtgagccgagatcatgccactgcactccagcccaggcaacagtgtgagattccgtctc-aaa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189671728 824 - 190850796 I e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e saiBol1.JH378165 13162839 50 - 14256875 I e nomLeu3.chr7b 112777282 274 + 115148730 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=14647.000000 s hg38.chr4_KI270789v1_alt 185253 15 + 205944 aaa-------aaaaaaaaaatt s panTro5.chr4 192970160 15 + 194502333 aaa-------aaaaaaaaaatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192854614 15 + 195804263 aaa-------aaaaaaaaaatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3886006 15 + 4876863 aaa-------aaaaaaaaaatt i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189053131 11 + 190429646 aa--------aaaaaaa---ac i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187996794 14 + 189454096 aa--------aaaaaaaaacac i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24387217 14 - 25927173 aa--------aaaaaaaaacac i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3416818 21 + 4669795 aaa-aagaacaaaaaaaaacac i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134373857 15 + 135778131 aaa-------aaaaaaaaacac i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2840637 22 - 2847728 aaaaaaaaacaaaaaaaaccac i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 939614 18 + 2368649 aaaaaa----aaacaaaaaaac i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189672552 15 - 190850796 -----aatagaaaagaaaag-- i calJac3.chr3 I 824 C 0 s saiBol1.JH378165 13162889 15 - 14256875 -----aatagaaaagaaaag-- i saiBol1.JH378165 I 50 C 0 e cebCap1.NW_016107886v1 1057253 564 - 2196201 I e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e nomLeu3.chr7b 112777282 274 + 115148730 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2857.000000 s hg38.chr4_KI270789v1_alt 185268 2 + 205944 cc s panTro5.chr4 192970175 2 + 194502333 cc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192854629 2 + 195804263 cc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3886021 2 + 4876863 cc i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189053142 2 + 190429646 tg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187996808 2 + 189454096 tg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24387231 2 - 25927173 cg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3416839 2 + 4669795 cg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134373872 2 + 135778131 ca i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2840659 2 - 2847728 cg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 939632 2 + 2368649 ca i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189672567 2 - 190850796 cc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162904 2 - 14256875 cc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1057817 2 - 2196201 cc i cebCap1.NW_016107886v1 I 564 C 0 e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3443246 566 - 5030052 I e nomLeu3.chr7b 112777282 274 + 115148730 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2550295.000000 s hg38.chr4_KI270789v1_alt 185270 301 + 205944 cattttctgaggagaaattcaagctggctgcagaaa-tttcataagtaacgaggagccaaatgttaatccccaagacaatggggaatatatctccagggcatatcagaggtcttcatggcagaccctctcat------cactggccaggaggcctaggaggaaaaagtggttttgtggaccagacccaggatccctgtgttgtgtgcagtc-tagggacttggtgccctgcttcccagatgctccagctgtgactgaaaggggccaaggtacagcttgggctattgcttca-gatggtgaaagccccaag s panTro5.chr4 192970177 303 + 194502333 cattttctgaggagaaattcaagctggctgcagaaattttcataagtaacgaggagccaaatgttaatccccaagacaatggggaaaatgtctccagggcatatcagaggtcttcatggcaggccctctcat------cactggccaggaggcctaggaggaaaaagtggttttgtggaccagacccaggatccctgtgttgtgtgcagtcttagggacttggtgccctgcttcccagatgctccagctgtgactgaaaggggccaaggtacagcttgggctattgcttca-gatggtgaaagccccaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192854631 302 + 195804263 cattttctgaggagaaattcaagctggctgcagaaattttcataagtaacgaggagccaaatgttaatccccaagacaatggggaaaatgtctccagggcatatcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttgtggaccagacccaggatccctgtgttgtgtgcagtc-tagggacttggtgccctgcttcccagatgctccagctgtgactgaaaggggccaaggtacagcttgggctattgcttca-gatggtgaaagccccaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3886023 302 + 4876863 cattttctgaggagaaattcaagctggctgcagaaattttcataagtaacgaggagccaaacgttaatccccaagacaatggggaaaatgtctccagggcatatcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttgtggaccagacccaggatccctgtgttgtgtgcagtc-tagggacttggtgccctgcttcccagatgctccagctgtgactgaaaggggccaaggtacagcttgggctattgcttca-gatggtgaaagcctcaag i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189053144 302 + 190429646 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggccagatccagggtccctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatagcttca-gatggtgcaagccccaag i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187996810 302 + 189454096 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggccagatccagggtccctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatagcttca-gatggtgcaagccccaag i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24387233 302 - 25927173 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggccagatccagggtccctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatagcttca-gatggtgcaagccccaag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3416841 302 + 4669795 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggccagatccagggtccctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatagcttca-gatggtgcaagccccaag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134373874 302 + 135778131 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccttctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggctagagccagggtccctgtgttgtgcgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatggcttca-tatggtgcaagccccaag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2840661 302 - 2847728 cattttctgaggagaaattcaaactggctgcagaaatttgcataagtaatgaggagtcaaatgttaatccctaagacaatggggaaactgtctccagggcatgtcagaggtcttcatggcagcccctctcat------cactggccaggaggcctaggaggaaaaagtggttttctgggccagatccagggtccctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctgtgagtaaaaggggtcaaggtacagcttgggccatagcttca-gatggtgcaagccccaag i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 939634 302 + 2368649 cattttctgaggagaaattcaagctggctgcagaaatttgcgtaagtaatgaggagccaaatgttaatccctaagacaatggggaaactgtctccagggtatatcagaggccttcacggcagcccctctcat------cactggccaggaggcctagaaggaaaaagtggttttctgggccagacccaggatctctgtgttgtgtgcagtg-tagagacttggtgccctgcttcccagatgctccagctatgagtaaaaggggtcaaggtacagcttgggccatggcttca-gatggtgcaagccccaag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189672569 301 - 190850796 cattttctaaggagaaattcaagctggctgcagaaatttgcttaagtaatgagtagccaaatgttactaccaaagacaatggggaaaatgtttccagggcgtatcagaggtcttcatggcagtccctctcat------tactggctggaaggcctaggaggaa-aagtggttttgtgggctggacccaggatccccgtgttgtgtgctgcc-tagagacctggtgccctatgtcccagctactccagctatgactgaaaggggccgaggtacagcttgggccatggcttca-gagggtgcaagccccaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13162906 308 - 14256875 gattttctgaggagaaattcaagccggctgcagaaatttgcttaagtaataagtagccgaatgttaataccgaagacaatggggaaaatgtttccagggcgtatcagaggtcttcatggcagcccctctcattactactactggctggaaggcctagaaggaacaagtggttttgtgggctggatccaggatccccatgttgtgtgcagcc-tagaggcctggtggcctatgtcccagtcgctccagctatgactgaaaggggccaaggtacagcttgggccatggcttca-gagggtgcaagccccaag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1057819 302 - 2196201 cattttctgaggagaaattcaagctggctgcagaaatttgcttaagtaataagtagccaaatgttaataccgaagacaatggggaaaatgtttccagggcgtatcagaggtcttgatggcagcccctctcat------tactggcggaaaggcctaggaggaaaaagtggttttgtgggctggacccaggatccccatgttgtgtgcagcc-tagaggcctgatgccctatgtcccagctgctccagctgtggctgaaaggggccaaggtacagcttgggtcatggcttca-gagggtgcaagccccaag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3443812 284 - 5030052 cattttctgaggagaaattcaagctggctgcagaaattttcttaagtaatgaatagctgaatgttaataccgaagacaatggggaaaatgtttctagggcgt-----aagtcttcatggcagcccctctcat------tactggctggaaggccca--------------ttttgtgggctggacccaggatccccatgttgtgtgcagcc-tagaggcctggtgccctatgtcccagctgctccagttatgactgaaaggggccaaggtacagcttgggccatggcttcaggggggtgcaagccccaag i aotNan1.NW_018492112v1 I 566 C 0 e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e nomLeu3.chr7b 112777282 274 + 115148730 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=10375840.000000 s hg38.chr4_KI270789v1_alt 185571 1155 + 205944 ccctggcagcttccatgcggtgttgagccttcgggttcacagaagtcaagcattgaggttt-gggaacttctacctagatttcaaagcatgtatggaaatacctggttgtccaggcagaagttggctgcaggggtggggctctcatgaagaacctctgctagggcaatgtgaaagggcaatgtggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccaccgtcctccagacctcagaatggtagatccactgacagcttgcactgtgcacctggaaaaaccacagacattcaacaccagcccatgaaaggagccaggagggaggctgtatcctgaagagccacagagccaggagggaggctgtatcctgaagagccacagg-gtgaagctgcccaaggccatgggaacctacctcttacgttaccgtgacctggatgtgagccatagactcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttggacttgcatggggcctgtagcccctttattttggctaatttctcccatttggaaaggctgtatttacccaatgcctgaacccct-ttgtatctaggaagtaactaacttgcttttgattttacaggctcataggtggaagggacttgccttgtcttgaatgagactttggactgtggacttttgaattaatgctgaaatgagttacaactttgggggactgctgggaaggcatgattggttttgaaatgtgaggacatgagatttgggaggggccagaggcagaatgatatggtttggctgtgtctccacctaaatctcattttgaattcccccatgttgtggcagggatctggtgggaggtgactggatcatggaggcaggtcttacctgtgc-tgttctcatgatagtgaatgagtctctcaagatctgatggttttaaaagggggagtttccctgcacaagctctctctttgcctgccaccatccatgtaagatgtgacctgctcctccttgccttc-accatgattgtgaggcctccccagccatgtggaactgtgagtccattaaacctctttttcttcccagttttgggtatgtctttatcagcagtgtgaaaacagagta s panTro5.chr4 192970480 1120 + 194502333 ccctggcagcttccatgtggtgttgagcctgtgggttcacagaagtcaagcattgaggttt-gggaacttctacctagatttcaaagcatgtatggaaatacctggttgtccaggcagaagttggctgcaggggtggggatctcatgaagaacctctgctagggcaatgtgaaagggcaatgtggggtcggagcccccacacagagtccctactggggcactgcctagaggagctgtgaaaagagggccaccgtcctccagacctcagaatggtagatccactgacagcttgcactgtgcacctggaaaaaccacagacactcaacaccagcccatgaaag-----------------------------------gagccaggagggaggctgtatcctgcagagccacagg-gtggagctgcccaaggccatgggaacctacctcttacattaccgtgacctggttgtgagccatagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttggacttgcatggggcctgtagcccctttcttttggctaatttctcccatttggaaaggctgtatttacccaatgcctgaaccccc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatagatggaagggacttgccttgtcttgaatgagactttggactgtggacttttgaattaatgctgaaatgagttacaactttgggggactgttgggaaggcatgattggttttgaaatgtgaggacatgagatttgggaggggccagaggcagaatgatatggtttggctgtgtctccacctaaatctcattttgaattcccccatgttgtggcagggacctggtgggaggtgactggatcatggaggcaggtcttacctgtgc-tgttctcatgatagtgaatgagtctctcgagatctgatggttttaaaagggggagtttccctgcacaagctctctctttgcctgccaccatccatgtaagatgtgacctgctcctccttgccttc-accatgagtgtgaggcctcaccagccatgtggaactgtgagtccaataaacctctttttcttcccagttttgggtatgtctttatcagcagtgtgaaaacagagta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192854933 1120 + 195804263 ccctggcagcttccatgtggtgttgagcctgcgggttcacagaagtcaagcattgaggttt-gggaacttctacctagatttcaaagcatgtatggaaatacctggttgtccaggcagaagttggctgcaggggtggggatctcatgaagaacctctgctagggcaatgtgaaagggcaatgtggggtcggagcccccacacagagtccctactggggcactgcctagaggagctgtgaaaagagggccaccgtcctccagacctcagaatggtagatccactgacagcttgcactgtgcacctggaaaaaccacagacactcaacaccagcccatgaaaggagcca-----------------------------------ggagggaggctgtatcctgcagagccacagg-gtggagctgcccaaggccatgggaacctacctcttacattaccgtgacctggttgtgagccatagagtcaaaagaggtcatttt-ggagcttaaagatctgagtgccctgctggattttggacttgcatggggcctgtagcccctttcttttggctaatttctcccgtttggaaaggctgtatttacccaatgcctgaaccccc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatagatggaagggacttgccttgtcttgaatgagactttggactgtggacttttgaattaatgctgaaatgagttacaactttgggggactgttgggaaggcatgattggttttgaaatgtgaggacatgagatttgggaggggccagaggcagaatgatatggtttggctgtgtctccacctaaatctcattttgaattcccccatgttgtggcagggacctggtgggaggtgactggatcatggaggcaggtcttacctgtgc-tgttctcatgatagtgaatgagtctctcgagatctgatggttttaaaagggggagtttccctgcacaagctctctctttgcctgccaccatccatgtaagatgtgacctgctcctccttgccttc-accgtgagtgtgaggcctcaccagccatgtggaactgtgagtccaataaacctctttttcttcccagttttgggtatgtctttatcagcagtgtgaaaacagagta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3886325 1118 + 4876863 ccctggcagcttccatgtggtgttgagcctgcgggttcacagaagtcaagcattgaggttt-gggaacttctacctagatttcaaagcatgtatggaaatacctggttgtccaggcagaagttggctgcaggggtggggctctcatgaagaacctctgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcacttcctagtggagctgtgaaaagagggccaccgtcctccagaccacagaatggtagatccactgacagcttgcactgtgcacctggaaaaaccacagacactcaacaccagcccatgaaag-----------------------------------gagccaggagggaggctttatcctgcagagccacagg-gtggagctgcccaaggccatgggaacctacctcttacattaccgtgacctggatgtgagccatagagtcaaaggaggtcatttt-ggagcttaaaaatctgagtgccctgctggattttggacttgcatggggcctgtagcccctttcttttggctaatttctcacatttggaaaggctgtatttacccaatacctgaaccccc-ttgtatctaggaagcaactaacttgcttttgattttacaggctcataggtggaagggacttgccttgtcttgaatgagactttggactgtggacttttgaattaatgctgaaatgagttacaactttgggggactgttgggaaggcatgattggttttgaaatgtgaggacatgagatttggga-gggccagaggcagaatgatatggtttggctgtgtctccacctaaatctcattttgaattcccccatgttgtggcagggacctggtgggaggtgactggatcgtggaggcaggtcttacctgtgc-tgttctcatgatagtgaatgagtctctcgagatctgatggttttagaa-ggggagtttccctgcacaacctctctctttgcctgccaccatccatgtaagatgtgacctgctcctccttgccttc-acggtgattgtgaggcctcaccagccatgtggaactgtgagtccaataaacctctttttctttgcagttttgggtatgtctttatcagcagtgtgaaaatcgagta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112777556 1123 + 115148730 ccttggcagcttccacatggtgttgagcctgtgggttcacagaagtcaagaattgaggtttggggaacttccacctagatttcaaagcatgtatggaaatacctggttgtccaggcagaagtttgctgcaggggtggggccctcatggagaacctctgctagggcaatgtgaaagggcaatgtggggtcggagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccactgtcctccatacctcagaatggtagatccactgagagcttgcactgtgtgcctggaaaaatcacagacattcaataccagcccatgaaag-----------------------------------gagccaggagggaggctgtatcctgcagagcaacaggagtggagctgccaaaggccatgggaacccacctcttacatcaccgtgacctggatgtgagccatagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggatttcagacttgcgtggggcctgtagcccgtttattttggccaatttctcccatttggaaaggctgcgtttacccaatgccagtaccccc-ttgtacctaggaagtaactcacgtgcttttggttttatgggctcataggcggaagggacttgccttgtctcagatgagactttggactgtggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggttttgaaatgtgaggacatgagatttgggaggggtcagaggcagaatgatatggtttggctgtgtctccacctaaatctcattttgaattcccatgtgttgtgggagggacctggcgggaggtgactggacattgggggcaggtcttacctgtgc-tgttcgcatgatagtgaatgagtctctcaagatctgatggttttagaagggggagtttccctgcacaagctctctctttgcctgccaccatccatgtaagatgtgacttgctcctccttgccttctgccataattgtgaggcctccccagccatgtggaactgtgagtccaataaacctctttttctttccagttttgggtttatctttatcagcagtgtgaaaacagacta i nomLeu3.chr7b M 274 C 0 s rheMac8.chr5 189053446 1118 + 190429646 ccttggcatcttccacatggtgttgagcctgcgggtgcacagaagtcaagaattgaggtgt-gggaacctccacctagatttcaaagcatgtatggaaatgcctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccacagtcctccaagcctcagaatggtacatccactgacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagcccatgaaaggagccg-----------------------------------ggagggaggctgtatcctgcagagtcacaggggtggagctgcccaaggccatgggaacccacctcctgcatcagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacttgcatggggcctgtagcccctttattttggccattttctcccatttggaatgactgtatttacccaatgcctgtacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgttttggatgagcctttggactgtggacttttgaattaatgccgaaatgagttacaactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcattttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-tg-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagctctctctttgccggctaccgtccatgtaagatgtgacttgctccttcttgtctgctgccatgattgtgaggcctccctagtcatgtgtcac--tgagtccattaaacctctctttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187997112 1118 + 189454096 ccttggcatcttccacgtggtgttgagcctgcgggtgcacagaagtcaagaattgaggtgt-gggaacctccacctagatttcaaagcatgtatggaaatgcctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccacagtcctccaagcctcagaatggtagatccactgacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagcccatgaaaggagcca-----------------------------------ggagggaggctgtatcctgcagagtcacaggggtggagctgcccaaggccatgggaacccacctcctgcatcagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacttgcatggggcctgtagcccctttattttggccaatttctcccatttggaatgactgtatttacccaatgcctgtacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgttttggatgagcctttggactgtggacttttgaattaatgccgaaatgagttacaactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcattttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-tg-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagctctctctttgccggctaccgtccatgtaagatgtgacttgctccttcttgtctgctgccatgattgtgaggcctccctagccatgtgtcac--tgagtccattaaacctctttttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24387535 1118 - 25927173 ccttggcatcttccacgtggtgttgagcctgcgggtgcacagaagtcaagaattgaggtgt-gggaacctccacctagatttcaaagcatgtatggaaatgcctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccacagtcctccaagcctcagaatggtagatccactgacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagcccatgaaaggagctg-----------------------------------ggagggaggctgtatcctgcagagtcacaggggtggagctgcccaaggccatgggaacccacctcctgcatcagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacctgcatggggcctgtagcccctttattttggccaatttctcccatttggaatgactgtatttacccaatgcctgtacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgttttggatgagcctttggactgtggacttttgaattaatgccgaaatgagttacaactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcattttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-tg-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagccctctctttgccggctaccgtccatgtaagatgtgacttgctccttcttgtctgctgccatgattgtgaggcctccctagccatgtgtcac--tgagtccattaaacctctttttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3417143 1118 + 4669795 ccttggcatcttccacgtggtgttgagcctgcgggtgcacagaagtcaagaattgaggtgt-gggaacctccacctagatttcaaagcatgtatggaaatgcctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccactgtcctccaggcctcagaatggtagatacactgacagcttgcactgtgtgtctggaaaagccacagacactcaacaccagcccatgaaaggagcca-----------------------------------ggagggaggctgtatcctgcagagtcacaggggtggagctgcccaaggtcatgggaacccacttcctgcataagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacttgcatgaggcctgtagcccctttattttggccaatttctcccatttggaatgactgtatttacccaatgcctatacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgtcttggatgagcctttggactgtggacttttgaattaatgccgaaatgagttacaactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcactttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-cg-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagctctctctttgccggctactgtccacgtaagatgtgacttactccttcttgtctgctgccatgattgtgaggcctccctagccatgtgtcac--tgagtccattaaacctctttttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134374176 1116 + 135778131 ccttggcatcttccacgtggtgttgagcctgcgggtgcacagaagtcaagaattgaggttt-gggaacctccacctagatttcaaagcatgtatggaaatggctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccc--cacagagtccctactggggcactgcctagtggagctgtgaaaagagggccactgtcctccaagcctcagaatggtagatccactgacagcttgcactgtgtgcctggaaaagccacaggaactcaacaccagcccatgaaaggagcca-----------------------------------ggagggaggctgtatcctgcagagtcacaggggtggagctgctcaaggccaggggaacccacctcctgcatcagcgtgacctggatgtgagagacagagtcaaaggaggtcatttt-ggagcttaaggatctgagtgccctgctggattttagacttgcatggggcctgtagcccctttattttggccaatttctcccatttggaatgactgtatttacccaatgcctatacctcc-ttgtatctaggaagtaactaacctgcttttgattttacaggctcatgggtggaagggacttgccttgtctcggatgagcctttggactgtggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcattttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-cc-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagttctctctttgccggctaccgtccacgtaagatgtgacttgctccttcttgtctgctgccatgattgtgaggcctccctcgccatgtgtcac--tgagtccattaaacctctttttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2840963 1118 - 2847728 ccttggcatcttccacgtggtgttgagcctgcgggtgcacagaagtcaagaattgaggtgt-gggaacctccacctagatttcaaagcatgtatggaaatgcctggttgtctaggcagaagtttgcagcaggggtggggctctcctgaagaacctttgctagggcaatgtgaaagggcaatgtggggtcagagcccccacacagagtccctactggggcactgcctagtggagctgtgaaaagagggccactgtcctccaggcctcagaatggtagatacactgacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagcccatgaaaggagcca-----------------------------------ggagggaggctgtaccctgcagagtcacaggggtggagctgcccaaggccatgggaacccacctcctgcatcagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacttgcatggggcctgtagcccctttattttggccaatctctcccatttggaatgactgtatttacccaatgcctgtacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgtcttggatgagcctttggactgtggacttttgaattaatgccgaaatgagttacaactttgggggactgttgggaaggcatgattggctttgaaatgtgaggatatgagatttgggagggcccagaggcagaatgacatggtttggctgtgtctccacctaaatctcattttgaattccgatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-cg-tctcacgatagtgaatgagtctcttgagagctgatggtttcaaaa-ggggagtttccctgcacaagctctctctttgccggctaccgtccacgtaagatgtgacttgctccttcttgtctgctgccatgattgtgaggcctccctagccatgtgtcac--tgagtccattaaacctctttttcttcccagttttggatatgtctttatcagcagtgtgaaaacaagcta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 939936 1121 + 2368649 ccttggcatcttccatgtggtgttgagcctgtgggtgcacagaagtcaagaattgaggttt-gggaacctccacctagatttcaaagcatgtatagaaatgcctggttgtccaggcagaagtttgcagcaggggtggggctctcatgaagaacctttgctagggcaatgtgaaagggcaatgtgaggtcagagcccccacacagagtccctactgggacactgcctagtggagctgtaaaaagagggccacggtcctccaagcctcagaatggcagatacactgacagcttgcactgtgtgcctggaaaagccacagacactcaacaccagccgatgaaagaagcca-----------------------------------ggagggaggctgtatcctgcggagtcacaggggtggagccgcccaaggccatgggaacctacctctgacatcagcgtgacctggatgtgagacacagagtcaaaggaggtcatttt-ggagcttaaagatctgagtgccctgctggattttagacttgcatggggcctgtagcccctttattttggccaatttctccgatttggaatgactgtacttacccaatgcctatacctcc-ttgtatctaggaagtaactaacttgcttttgattttacaggctcatgggtggaagggacttgccttgtcttggatgagcctttggactgtggacttttgagttaatgctgaaatgagttacaactttgggggactgttgggaaggcgtgattggttttgaaatgtgaggacatgagatttgggaggggccagaggcggaatgacatggtgtggccgtgtctccacctaaatctcattttgaattcccatgtgttgtgggagggacctgttgggaggtgatgggatcatgggggcaggtcttacctgtgc-ca-tctcacaatagtgaatgaggctcttgagagctgatggtttcaaaagggggagtttccctgcacaagctctctctttgccggctactgtccacgtaagatgtgacttgctccttcttgtcttctgccatgcttgtgaggcctccccagccacgtggcactgtgagtccattaaacctctttttcttcccagttttgggcatgtctttatcagcagtgtgaaaataagcta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189672870 1098 - 190850796 ccttggcagcttccacatggtgttgagcctgcaggtgcactgaagtcaagaattgaggttt-aggaacctccacctagatttcagagcatgtgtggaaatgcctggatgtccaggcagaagtttcctgcaggggcagggctctcatgaagaacctctgctagggcaatgtgatagaggaatgtggggctggatcccacacacagagtccctactgggtcactgtttagtggagttgtgagaagagggccactgtcctccagatcccagaatggcagatccacctacagcttgctctgtgtgtctggaaaagccacagacact------cggcccatgaaagcagccg-----------------------------------gaagggaggctgtaccctccagagccacaggggcggagctgccccagaccatgggaacccacctcttacatcagtgtgactcagatgtgagatatagagtccaaggaggtcattttgggagcttaaagatccgaccgccctgctggattttggactt--------------gcccctttattttggccaatttatctcacttggaatggctctatttacccaatgcctgtacccccattgtatctaggaagtaactaacttgcttttgattttacaagctcataggcagaagagacttgccttgtctcagatgagactttggactatggacatttgggttaatgttgaaatgagttacaactttgggggaccattgggaaggcatgattcgttttgaaatgtgaggacatgagatttggaaggggctagaggcaaaatgatatggtttggt--tgtctccacctaaatctcgttttgaattcccacatgttgtggg-gggacccagagggaggtgattcaatcatgg-ggcaggtcttccctgtgc-tgttctcatgatagttattgagtctgttgagatctgatcgtttaaaaagag--agtttcctggcacaagctctctctttgcctgccaccatttaagtaagacatgacttgctccaccctgccttctgccatggttctgaggcttttccagacatgtggaactgtgagtccatcaaacctcttttgcttcgcagtttcaggtatgtctttatcaacagcatcaaaaccaacta i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13163214 1108 - 14256875 ccttggcagcttccacatggtgtcgagcctgcaggtgcacagaagtcaagaattgaggttt-aggaacctccacctagatttccgggcatgtgtggaaatgcctggatgtccaggcagaagttgcctgcaggggcggggctctcatgaacaacctccactagggcaatgtgatagggaaatgtggggctggatcc--cctacagagtccctactgggtcactgtttagtggagttgtgagaagagggccactgtcctccagatcccagaatgggagatccacctgcagcttgctctgtgtgcctggaaaagccacagaca--------cagcccatgaaagcagccg-----------------------------------ggagggaggctgtaccctccagagccacaggagtggagctgccccagatcatgggaatgcccctcttacatcagcatgacccggatgtgagatacagagtcaaaggaggtcatttt-ggagcttaaagatctgaccgccacgctggattttggacttgcatgggaactgtagcccctttattttggccaatttatctcacttggaatggctgtatttatgtaatgtgtgtactcccattgtatctaggaagtaactaacttgcttgtgattttacaagctcataggcagaagagacttgccttgtttcagataagactttggactgtgtacttttgggttaatgctgaaatgagttatgactttgggggaccattgggaaggcatgattggttttgcaatgtgtggacatgagatttggaaggggctagaggcagaatgatatggtttggc--tgtccccacgtaaatctcattttgaattcccccatgttgtggg-gggacccggtgggaggttattcaatcatgg-ggtgggtcttccctgtgctttttctcatgatagttattgagtctcttgagatctgatggttttaaaagaggtagttccccagcacaag--ctctctttgcctgccaccattcaagtaagacctgacttgctcctccctgtcttctgccgttgttctgaggccttcccagccatgtggaactgtgagtccgttaaacctcttttgcttcccagtttcaggtatgtctttatcagcagcatcaaaactgacta i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1058121 1098 - 2196201 ccttggcagtttgcacatggtgttgagcctgcaggtgcacagaagtcaagaattgaggttt-aggaacctccacctagatttcagagcatgtgtggaaatgcctggatgtccaggcagaattttcctgcagggccggggctctcatgaagaacctctgctagggcaatgcgatagggaaatgtggggctggatcccccacacatagtccctactgggtcactgtctagtggagttgtgagaagagggccactgtcctccagatcccagaatggcagatccatctgcagcttgctctgtgtgcatggaaaagccaca------------cagtccatgaaagcagctg-----------------------------------ggagggaggctgtaccctccagagccacaggggcggagctgcccctgaccatgggaatgcccctcttacatcagcgtgacccagatgtgagatatagagtcaaaggagatcatttt-ggagcttaaagatctgacggccatgctggattttagacttgcatgggaaatgtagaccctttattttggccaatttatctcacttggaat-gctgtatttatgtagtgcatgtacccccactgtatctaggaagccactaacttgcttttgattttacaggctcataggcagaagagacttgccttttctcagatgagactttggactgtggacatttgggttaatgctgaaatgagttatgactttggaggaccgttgggaaggcatgactggttttgaaatgtgaggacatgaaatttggaagaggctagaggcagaatgatatggtttggc--tgtccccatctaaatctcattttgaattcccacatgttgtggg-gggacctggtgggagatgattcaatcatgg-ggcgggtcttctctgcgc-tgttctcatgattgttattgagtgtcctgagatctgatggttttaaaagaggtagtttcccagcacaac-tctctcttt-tctgccaccattcaagtaagacatgatttgctcct-cctgccttctgccatcattctgaggccttcccagccatgt-gaactgtgagtccatcaaatcccttttgcttcccaatttcaggtatgtctttatcaacagcatcaaaacCA---- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3444096 1113 - 5030052 ccttggcagcttccatatggtgttgagcctgtaggtgcacagaagtcaagaattgaggttt-aggaacctccgcctagatttcagagcatgtgtggaaatgcctggatgtccaggcagaagtttcctgcaggggcggggctctcatgaagaacctctgctagggcaatgtgatagggaaatgtggggctggatcccccacacagagtccctactgggtcagtgtttagtggagttgtgagaagagggccactgtcctcctgattccagaatggcagatccacctatagcttgctctgtgtgcctggaaaagccacagacact------cagcccatgaaagcagctg-----------------------------------ggagggaggctgtaccctccagagccacagggatggagctgccccagaccatgggaatgcacttctcacatcagcatgacccagatgtgagatatagagtcaaaggaggtcatttt-ggagcttaaagatctgaccgccatgctggattttggacttgcatgggaactgtagcccctttattttggccaatttatctcacttggaatggctgtatttatgcaatacgtgtacccccactgtatctaggaagtaactaacttgcttttgattttacactctcataggcagaaaagacttgccttgtctcagatgagactttggactgtggacatttgggttaatgctgaaatgagttatgactttgggggactgttgggaaggcatgattggttttgaaatgtgaggacatgagatttggaaggggctagaggcagaatgacatggtttggc--tgttcccacctaaatctcattttgaattcccacatgttgtggg-gggacctggtgggaggtgattcaatcatgg-ggtgggtcttctctgtgc-tgttctcatgatagttattgagtctcttgagatctgatggttttaaaagaggtagtttcccagcacaagctctctctttgcctgccaccattcaagtgagacatgacttgctcctccctgccttctgccatgattctgaggccttcccagccatgtggaactgtgagtccattaaacctcttttgcttcccagtttcaggtatatctttatcaacaacatcaaaactgacta i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1511086 1 - 2520184 I e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=184307.000000 s hg38.chr4_KI270789v1_alt 186726 18 + 205944 atacaCTTTATTACATTT s panTro5.chr4 192971600 18 + 194502333 atacaCTTTATTACATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856053 18 + 195804263 atacaCTTTATTACATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887443 18 + 4876863 atacaCTTTATTACATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112778679 18 + 115148730 atacaCTTTATTACATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054564 18 + 190429646 atacaCTTTATTACATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998230 18 + 189454096 atacaCTTTATTACATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24388653 18 - 25927173 atacaCTTTATTACATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418261 18 + 4669795 atacaCTTTATTACATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375292 18 + 135778131 atacaCTTTATTACATTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842081 18 - 2847728 atacaCTTTATTACATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941057 18 + 2368649 acataCTTTATTACATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189673968 18 - 190850796 atacTGTTTATTAAATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164322 18 - 14256875 atacaCTTTATTAAATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1059219 16 - 2196201 --ACACTTTATTAAATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3445209 18 - 5030052 atacaCTTTATTAAATTT i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1511087 18 - 2520184 ACATGCCCTATTATACTA i dasNov3.JH570353 I 1 C 0 e canFam3.chr16 17003365 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=205040.000000 s hg38.chr4_KI270789v1_alt 186744 16 + 205944 TCCTTCTACAAAATTT s panTro5.chr4 192971618 16 + 194502333 TCCTTCTACAAAATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856071 16 + 195804263 TCCTTCTACAAAATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887461 16 + 4876863 TCCTTCTACAAAATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112778697 16 + 115148730 TCCTTCTACAAAATTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054582 16 + 190429646 TCCTTCTACAAAATTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998248 16 + 189454096 TCCTTCTACAAAATTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24388671 16 - 25927173 TCCTTCTACAAAATTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418279 16 + 4669795 TCCTTCCACAAAATTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375310 16 + 135778131 TCCTTCTACAAAACTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842099 16 - 2847728 TCCTTCTACAAAATTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941075 16 + 2368649 TCCTTCTACAAAATTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189673986 16 - 190850796 TCCTTCTATGAAATTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164340 16 - 14256875 TCCTTCTACAAAATTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1059235 16 - 2196201 TCCTTCTacaaaattt i cebCap1.NW_016107886v1 C 0 I 28 s aotNan1.NW_018492112v1 3445227 16 - 5030052 TCCTTCTACAAAATTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17003365 16 - 59632846 TCCTTCTAAAAAATGT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511105 16 - 2520184 TCCTTATGCAAAATTC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=60635.000000 s hg38.chr4_KI270789v1_alt 186760 11 + 205944 ACATTTTTTat s panTro5.chr4 192971634 11 + 194502333 ACATTTTTTat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856087 11 + 195804263 ACATTTTTTat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887477 10 + 4876863 ACA-TTTTTat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112778713 11 + 115148730 ACATTTTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054598 11 + 190429646 ACATTTTTCAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998264 11 + 189454096 ACATTTTTCAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24388687 11 - 25927173 ACATTTTTCat i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418295 11 + 4669795 ACATTTTTCAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375326 11 + 135778131 ACATTTTTCAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842115 11 - 2847728 ACATTTTTCat i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941091 11 + 2368649 ACATTTTTCAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674002 11 - 190850796 ACATTTACAAA i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13164356 6 - 14256875 ACA-----AAA i saiBol1.JH378165 C 0 I 1 s aotNan1.NW_018492112v1 3445243 11 - 5030052 ACATTTTTTTG i aotNan1.NW_018492112v1 C 0 I 1 s canFam3.chr16 17003381 11 - 59632846 ACTTTTCCTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511121 9 - 2520184 CCATTTTAT-- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1059251 28 - 2196201 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2694456.000000 s hg38.chr4_KI270789v1_alt 186771 286 + 205944 a----------acaatagttttcatttgtat--ttctttttggatgacaaagacattttacagacattttatcattgaactc---tacaatattaagtgtta----gagcaagttttagctatttaacaat-aaggaaatggagcttcagcgacctgttgtagttaacatacataataagctgaataactg----ggtcatg-tattctatg--ctatgt-tttcctgaGTTATGTAGGTATCCTGT-------ATAAGAAAAAAAATCTG-TTTCATGATTCTAT-GAAAGTATTTTGATAACTTTTGATATATAAGACTTA s panTro5.chr4 192971645 286 + 194502333 a----------acaatagttttcatttgtat--ttctttttggatgacgaagacattttatagacattttatcattgaactc---tacaatattaagtgtta----gagcaagttttagctatttaacaat-aaggaaatggagcttcagcgacctgttgtagttaacatacataataagctgaataactg----ggtcatg-tattctatg--ctatgt-tttcctgaGTTATGTAGGTATCCTGT-------ATAAGAAAAAAAATCTG-TTTCATGATTCTAT-GAAAGTATTTTGATACCTTTTGATATATAAGACTTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856098 286 + 195804263 a----------acaatagttttcatttgtat--ttctttttggatgacgaagacattttacagacattttatcattgaactc---tacaatattaagtgtta----gagcaagttttagctatttaacaat-aaggaaatggagcttcagcgacctgttgtagttaacatacataataagctgaataactg----ggtcatg-tattctatg--ctatgt-tttcctgaGTTATGTAGGTATCCTGT-------ATAAGAAAAAAAATCTG-TTTCATGATTCTAT-GAAAGTATTTTGATACCTTTTGATATATAAGACTTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887487 285 + 4876863 a----------acaatagttttcatttgtat--ttc-ttttggatgacgaagacattttacagacattttatcattgaactc---tacaatattaagtgtta----gagcaagttttagctatttaacaat-aaggaaatggagctttagcgaCCTGTTGTAGTTAACATACATAATAAGCTGAATAACTG----GGTCATG-TATTCTATG--CTATGT-TTTCCTGAGTTATGTAGGTATCCTGT-------ATAAGAAAAAAAATCTG-TTTCATGATTCTAT-GAAAGTATTTTGATACCTTTTGATATAGAAGACTTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112778724 284 + 115148730 T----------ACAATAGTtttcatttgtat--ttctttttagatgacgaagacattttacggacattttatcattgaactc---tacaat-ttaagtgtta----gagcaagttttagctatttagcaat-aaggaaatggagcttcagcgacctgctgtagttaacatacgtaataagctgaataactg----ggtcatg-tatcctatg--ctatgt-tttcctgaGTTATGTAGGTATCCTGT-------ATAAG-AAAAAAATTAG-TTTTATGATTCTGT-AAAAGTATTTTGATACCTTTTGATACATAAGACTTA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054609 266 + 190429646 A----------ACAATAGTTTTCATTTGTAT--GTCTTTTTAGATGATGAAGATATTTTACAGACT-TTTAT--TTGAACTC------------AAGTGTTA----GAGCAAGTTTTAACTATTTAACAAT-AAGGAAATGGAGCTTCAGCGACCTGCCGTAGTTAACATACATAATAAAC--AATAACTG----GGTAATG-TATTCTATG--CTATGT-TTCCCTGAGTTACGTAGGTATCATGT-------AAAAC-AAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998275 277 + 189454096 A----------ACAATAGTTTTCATTTGTAT--GTCTTTTTAGATGATGAAGATATTTTACAGACA-TTTATCATTGAACTC---TACAATATTAAGTGTTA----GAGCAAGTTTTAACTATTTAACAAT-AAGGAAATGGAGCTTCAGTGACCTGCCGTAGTTAACATACATAATAAAC--AATAACTG----GGTAATG-TATTCTATG--CTATGT-TTCCCTGAGTTACGTAGGTATCATGT-------AAAAC-AAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24388698 277 - 25927173 a----------acaatagttttcatttgtat--gtctttttagatgatgaagatattttacagaca-tttatcattgaactc---tacaatattaagtgtta----gagcaagttttaactatttaacaat-aaggaaatggagcttcagcgaCCTGCCGTAGTTAACATACATAATAAAC--AATAACTG----GGTAATG-TATTCTATG--CTATGT-TTCCCTGAGTTACATAGGTATCATGT-------AAAAC-AAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418306 273 + 4669795 C----------ACAATAGTTTTCATTTGTAT--GTCTTTTTAGATGATGAAGATATTTTACAGACA-TTTATCATTGAACTC---TACAATATTAAGTGTTA----GAGCACGTTTTAAC----TAACAAT-AAGGAAATGGAGCTTCAGCGACCTGCCGTAGTTAACATATATAATAAAC--AATAACTG----GGTAATG-TATTCTATG--CTATGT-TTTCCTGAGTTACGTAGGTATCATGT-------AAAAC-AAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375337 277 + 135778131 A----------ACAATGGTTTTCATTTGTAT--GTCTTTTTAGATGATGAAGATATTTTACAGACA-TTTATCATTGAACTC---TACAATATTAAGTGTTA----GAGCAAGTTTTAACTATTTAACAAT-AAGGAAATGGAGCTTCAGCGACCTGCCATAGTTAACATACATAATAAAC--AATAACTG----AGTAATG-TATTCTATG--CTATGT-TTTCCTGAGTTACGTAGGTATCATGT-------AAAAC-AAAACAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842126 277 - 2847728 a----------acaatagttttcatttgtat--gtctttttagatgatgaagatattttacagaca-tttatcattgaactc---tacaatattaagtgtta----gagcaagttttaactatttaacaat-aaggaaatggagcttcagcgacctgccgtagttaacatacataataaac--aataactg----ggtaatg-tattctatg--ctatgt-tttcctgaGTTACATAGGTATCATGT-------AAAAC-AAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTGATACGTAAGACTTA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941102 289 + 2368649 ATGTGTGATATGAAATAGTtttcatttgcat--gtctttttagatgatgaagatatcttacagacattttatcattgaactc---tacaatattaagtgtta----gagcaagttttaactatttaacaat-aaggaaatggagcttcagcgacctgccgtagttaacatacataataaac--aataactg----ggtcatg-tatcctatg--ctatgt-tttcctgaGTTATGTAGGTATCATGT-------AAAACAAAAAAAATCTG-TTCTA-----CTAT-AAAAATATTTTGATACCCTTTAATACATAAGACTTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674014 285 - 190850796 A----------ACAATAGGTTCCATTTGTAT--TTCTTTTTAGATGACAAAGACATTTTACAGAAATTTCATCATTGCAGTC---TTCAGTATTAAGTGTTA----GAGCAAGTTTTAGCTGGTTAACATT-AAGGAAATGGCGCTTCAGTGACCTACCATAGTTAACATACATAATAAGCTAAATAAGTG----GGTCATG-TAT-CTATG--CTAAGT-TTTCCTGAGTTACATAGGTATTATGT-------GTAAGAAAAAAAATCTG-TTTTATGACTCTAT-ACAAATATTTTGGTACCCTTTGATACATAACACTTA i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13164363 273 - 14256875 A---------------------CATTTGTAT--TTCTTTTTAGATGACAAAGACATTTTACAGACATTTCATCATTGCACTC---TTCAATATTAAGTGTTA----GAGCAAGTTTTAGCTAGTTAACCTT-ACGGAAATGGAGCTTCAGTGACCTTCCATAGTTAACATACATAATAAGCTAAATAAGTG----GGTCATG-TAT-CTATG--CTAAGT-TTTCCTGAGTTATGTAGGTATTATGT-------ATAAG-AAAAAAATCTG-TTTTATTACTCTAT-AAAAATATTTTGGTACCCTTTGATATATAACACTTA i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1059279 282 - 2196201 a----------aCAATAGTTTTCATTTGTAT--TTCTTTTTAGATGACAAAGATATTTTACAGACATTTCATCATTGCACTC---TTCAATATTAAGTCTTA----GAGCAAGTTTTAGCTAGTTAACATT-AAGGAAATGGCGCTTCAGTGAGCTACCATAGTTAACATACATAATAAGCTAAATAAGTG----GGTCATG-TAT-CTATG--CTAAGT-TTTCCTGAGTTATGTAGGTATTATGT-------ATAAG--AAAAAATCTG-TTTTATGACTCTAT-AAAAATA-TTTGGTACCCTTTGATACATAACACTTT i cebCap1.NW_016107886v1 I 28 C 0 s aotNan1.NW_018492112v1 3445255 283 - 5030052 A----------ACAATAGTTTTCATTTGTAT--TTCTTTTTAGATGACAAAGACATTTTACAGACATTTCATCATTGTACTC---TTCAATATTAAGTGTTA----GAGCAAGTTTTAGCTAGTTAACCTT-AAGGAAATGGCGCTTCAGT-ACCTACCGTAGTTAACATACATAATAAGCTAAATAAGTG----GGTCATG-TAT-CTATG--CTAAGT-TTTCCTGAGTTATGTAGGTATTATGT-------ATAAG-AAAAAAACCTG-TTTTATGATGCTAT-AAAAATATTTTGGTACCCTTTGATACATAACACTTA i aotNan1.NW_018492112v1 I 1 C 0 s canFam3.chr16 17003392 288 - 59632846 ----------------AATttacatttgtat--tccttcattgatt-caaagcagttttacaaatattatgcctttggatttt--tacgatattatatgtta----aaacaagttttgcatatttaacagtggaaaaaatgggacttaagtgaactgccatagtt-atatatgtaataagttgaagaAGAG----GATCATGTTACTCTATG--TCTTGTGTTTTCTGAGTTTTG-AGGCACCATGTTATTGCCTTAGG-GGAAAAAACTG-CTTTATGAGCCTACAAAAAACATTTTGACACCCTTTGATTTATAAGATTTG i canFam3.chr16 C 0 I 949 s dasNov3.JH570353 1511130 303 - 2520184 A----------ACACTAGTTTACATTTTCATTCTTTTTCTCAGGTTTCAAAGCATTGTTTCAGATATTATGTCATCAGACTCTTATACAAAGCTTGCTGCTGTGTTGAGTGAGCCTGGACTACTTAA---T-AAAGAAAGGCAGCTTAAGTG-CCTGCCTTAGTT-GCATATGTAATAAAGTGAAGAATCGAGCTGGCAACA-TAC-CTATGTCTTGAGT-TTTCCTGAATTATTTAGGTGTCATGTTATTGTCTTAGG-GAGAAAATCTGTTTTTACAATCCTGCAAAAAATATTATGATACCCCTTGATACATCAGACTCA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1343491.000000 s hg38.chr4_KI270789v1_alt 187057 121 + 205944 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAGTAAAGTAAGTATAATGTAATTCAAATTCCTATAAACAACATTTAGTAAATATCTAAAAGGAAGTATCA s panTro5.chr4 192971931 121 + 194502333 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAGTAAAGTAAGTATAATGTAATTCAAATTCCTATAAACAACATTTAGTAAATATCTAAAAGGAAGGATCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856384 121 + 195804263 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAGTAAAGTAAGTATAATGTAATTCAAATTCCTATAAACAACATTTAGTAAATATCTAAAAGGAAGGATCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887772 121 + 4876863 TTAGTATGGGTATGGATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAGTAAAGTAAGTATAATGTAATTCAAATTCCTATAAACAACATTTAGTAAATATCTAAAAGGAAGGATCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779008 121 + 115148730 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAGTAAAGTAAGAATCATGTAATTCGAATTCCTATAAACAACATTTAGTAAGTATCTAAAAGGAAGGATCA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054875 121 + 190429646 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAGTAAATATCTAAAAGTAAGGATCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998552 121 + 189454096 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAGTAAATATCTAAAAGTAAGGATCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24388975 121 - 25927173 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAGTAAATATCTAAAAGTAAGGATCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418579 121 + 4669795 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAGTAAATATCTAAAAGTAAGGATCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375614 121 + 135778131 TTAGTATGGATATTCATCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAATAAATATCTAAAAGTAAGGATCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842403 121 - 2847728 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAACAAAACAAATGCAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAGCAACATTTAGTAAATATCTAAAAGTAAGGATCG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941391 121 + 2368649 TTAGTATGGATACGCGTCAAATTTTCTTTCAGTATACAACAAAACAAATGTAGTCAAGTAAGAATAATGTAATTCAAATTCCAATAAACAACATTTAGTAAATATCTCAAAGTAAGGATCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674299 121 - 190850796 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAATAAAGTGAGAATAATGTAATTCAAATTCCTGTAAACGACATTTAGTAAATCTCTAAAAGGAAGGATCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164636 117 - 14256875 TTAGTATGGATATGCATCAAATTTTCTTTCAGTATACAAAA----AAAATTAATAAAGTGAGAATAATGTAATTCAAATTCCGATAAACAACATTTAGTAAATCTCTAAAAGGAAGGATCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1059561 121 - 2196201 TTAATATGGATATGCATCAAATTTTCTTTCAGTATACAGCAAAATAAATTTAATAAAGTGAGAATAATGTAATTCAAATTACTATAAACAACATTTAGTAAATCTCTAAAAGGAAGGATCA i cebCap1.NW_016107886v1 C 0 I 312 s aotNan1.NW_018492112v1 3445538 121 - 5030052 TTAGTATGGGTATGCATCAAATTTTCTTTCAGTATACAACAAAATAAATTTAATAAAGTGCGAATAATGTAATTCAAATTCCTATAAACAACATTTAGTAAATCTCTAAAAGGAAGGATCA i aotNan1.NW_018492112v1 C 0 I 2557 s canFam3.chr16 17004629 115 - 59632846 ttaGTATGGACATGCATCAAATGTTCTTTTAATGCACAA---AATGAATCTGGAAGAGTAAGAATAATATAATTAAAATTCCTAAAGGCAACATTTAGTAAATATTTT---TTAAAAATCA i canFam3.chr16 I 949 C 0 s dasNov3.JH570353 1511433 98 - 2520184 TTAGTACAGGCATGTACCAATTTTTCTATCAATGTAGAATAAAACAAATTTAGAAGAGTGAAGATAATGTAATCCAGATTCCTA-----------------------AAAAAGAAAAACAA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=13600.000000 s hg38.chr4_KI270789v1_alt 187178 1 + 205944 G s panTro5.chr4 192972052 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856505 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887893 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779129 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054996 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998673 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24389096 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3418700 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375735 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842524 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941512 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674420 1 - 190850796 g i calJac3.chr3 C 0 I 315 s saiBol1.JH378165 13164753 1 - 14256875 g i saiBol1.JH378165 C 0 I 320 s cebCap1.NW_016107886v1 1059994 1 - 2196201 G i cebCap1.NW_016107886v1 I 312 C 0 s aotNan1.NW_018492112v1 3448216 1 - 5030052 G i aotNan1.NW_018492112v1 I 2557 C 0 s dasNov3.JH570353 1511531 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17004744 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=662680.000000 s hg38.chr4_KI270789v1_alt 187179 79 + 205944 AAATACTACTAAAGTTA-ATACACACACCTG--CCTACACTCAC--ACACGGCACACATTTTCAAAGATATAAAAGCACATAAT s panTro5.chr4 192972053 79 + 194502333 AAATACTACTAAAGTTA-ATACACACACCTG--CCTACACTCAC--ACACGGCACACATTTTCAAAGATATAAAAGCACATAAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856506 79 + 195804263 AAATACTACTAAAGTTA-ATACACACACCTG--CCTACACTCAC--ACACGGCACACATTTTCAAAGATATAAAAGCACATAAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887894 79 + 4876863 AAATAGTACTAAAGTTA-ATACACACACCTG--CCTACACTCAC--ACACGGCACACATTTTCAAAGATATAAAAGCACATAAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779130 80 + 115148730 AAATACTA-TAAAGTTA-ATACACACACACGTACCTACACTCAC--AAATGGCACACATTTTCAAAGATATAAAAGCACATAAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189054997 77 + 190429646 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998674 77 + 189454096 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24389097 77 - 25927173 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i macNem1.NW_012013133v1 C 0 M 660 s cerAty1.NW_012001672v1 3418701 77 + 4669795 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375736 77 + 135778131 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842525 77 - 2847728 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ACATGGCACACATTTTTAAAGATATAAAAACACATAAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941513 77 + 2368649 AAATACTACTAAAGTTA-ATACCCACA--TG--CCTACACTCAC--ATATGGCACACATTTTCAAAGATATAAAAACACATAAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674736 70 - 190850796 AAATACTATTAAAGTTA-ATACACACA--TG--CATACACTCA---------CACACATTTTCAAAGATACAAAAGTACAGAGT i calJac3.chr3 I 315 C 0 s saiBol1.JH378165 13165074 69 - 14256875 AGATA-TCCTAAAGTTA-ATACACACA--TG--CATACACTCA---------CACACATTTTCAAAGACACAAAAGCACAGAAC i saiBol1.JH378165 I 320 C 0 s cebCap1.NW_016107886v1 1059995 68 - 2196201 AAATACTACTGAAGTTA-ATACACACA--TG--CATACACT-----------CACACATTTTCAAAGATACAAAAGCACAGAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3448217 70 - 5030052 AAATACTACTAAAGTTA-ATACACATA--TG--CATACACTCA---------CACACATTTTCAAAGATACAAAAGCACAGAAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17004744 58 - 59632846 AAATACTATCAAATTAacatacacata--ca--cccacacacacatacacaGAACAAATTTT---------------------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511532 57 - 2520184 AAATACTCCTGCACTTA-ATACACACA--CA--C----------------GATACAAGTTTTAAAAGATAGAAAGGAT------ i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=19710.000000 s hg38.chr4_KI270789v1_alt 187258 2 + 205944 TG s panTro5.chr4 192972132 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856585 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887973 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779210 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055074 2 + 190429646 TG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998751 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418778 2 + 4669795 TG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375813 2 + 135778131 TG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842602 2 - 2847728 TG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941590 2 + 2368649 TG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674806 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165143 2 - 14256875 TG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1060063 2 - 2196201 TG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3448287 2 - 5030052 TG i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1511589 2 - 2520184 AG i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17004802 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=70133.000000 s hg38.chr4_KI270789v1_alt 187260 8 + 205944 AAAAGTAT s panTro5.chr4 192972134 8 + 194502333 AAAAGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856587 8 + 195804263 AAAAGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887975 7 + 4876863 -AAAGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779212 8 + 115148730 AAAAGTAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055076 8 + 190429646 AAAAGTAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998753 8 + 189454096 AAAAGTAT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418780 8 + 4669795 AAAAGTAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375815 8 + 135778131 AAAAGTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842604 8 - 2847728 AAAAGTAT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941592 8 + 2368649 AAAAGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674808 8 - 190850796 AAAAGTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165145 8 - 14256875 AAAAGTAT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3448289 8 - 5030052 AAAACTAT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17004802 7 - 59632846 -AATGTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511591 8 - 2520184 ATAAATAT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2660.000000 s hg38.chr4_KI270789v1_alt 187268 1 + 205944 -G s panTro5.chr4 192972142 1 + 194502333 -G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856595 1 + 195804263 -G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887982 1 + 4876863 -G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779220 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055084 1 + 190429646 -G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998761 1 + 189454096 -G i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418788 1 + 4669795 -G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375823 1 + 135778131 -G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842612 1 - 2847728 -G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941600 1 + 2368649 -G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674816 1 - 190850796 -G i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165153 1 - 14256875 -G i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3448297 1 - 5030052 -G i aotNan1.NW_018492112v1 C 0 I 3 s dasNov3.JH570353 1511599 1 - 2520184 C- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=28705.000000 s hg38.chr4_KI270789v1_alt 187269 5 + 205944 TTTTC s panTro5.chr4 192972143 5 + 194502333 TTTTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856596 5 + 195804263 TTTTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887983 5 + 4876863 TTTTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779221 5 + 115148730 TTTTC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055085 5 + 190429646 TTTTC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998762 5 + 189454096 TTTTC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418789 5 + 4669795 TTTTC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375824 5 + 135778131 TTTTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842613 5 - 2847728 CTTTC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941601 5 + 2368649 TTTTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674817 5 - 190850796 ATCTC i calJac3.chr3 C 0 T 401 s saiBol1.JH378165 13165154 5 - 14256875 GTCTC i saiBol1.JH378165 C 0 T 405 s dasNov3.JH570353 1511600 5 - 2520184 TCATC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=3498.000000 s hg38.chr4_KI270789v1_alt 187274 2 + 205944 TG s panTro5.chr4 192972148 2 + 194502333 TG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856601 2 + 195804263 TG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887988 2 + 4876863 TG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779226 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055090 2 + 190429646 CA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998767 2 + 189454096 CA i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418794 2 + 4669795 CA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375829 2 + 135778131 CA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842618 2 - 2847728 CA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941606 2 + 2368649 CA i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1511605 2 - 2520184 TG i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189674822 401 - 190850796 T e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e saiBol1.JH378165 13165159 405 - 14256875 T e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=11000.000000 s hg38.chr4_KI270789v1_alt 187276 2 + 205944 Gg s panTro5.chr4 192972150 2 + 194502333 Gg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856603 2 + 195804263 Gg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887990 2 + 4876863 Gg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779228 2 + 115148730 Gg i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055092 2 + 190429646 Gg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998769 2 + 189454096 Gg i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418796 2 + 4669795 GG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375831 2 + 135778131 Gg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842620 2 - 2847728 Gg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941608 2 + 2368649 Gg i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189674822 401 - 190850796 T e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e saiBol1.JH378165 13165159 405 - 14256875 T e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=328104.000000 s hg38.chr4_KI270789v1_alt 187278 59 + 205944 gccgggcgcagtgactcacgcctgtaatcccagcactttgggaggccgaggcaggcgga s panTro5.chr4 192972152 59 + 194502333 gctgggcgcagtgactcatgcctgtaatcccagcactttgggaggccgaggcgggtgga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856605 59 + 195804263 gctgggcgcggtgactcatgcctgtaatcccagcactttgggaggccgaggcgggtgga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3887992 59 + 4876863 gccgggcgcagtgactcacgcctgtaatcccagcactttgggaggccgaggcgggtgga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779230 59 + 115148730 gccaggtgcagtggctcacgcctgaaatcccagcactttgggaggccgaggtgggcgga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055094 59 + 190429646 gccaaccatagtggctcacgcctataatcccagcactttgggaggctgaggcgggtgga i rheMac8.chr5 C 0 I 4 s macFas5.chr5 187998771 56 + 189454096 gccaaccatagtggctcacgcctataatcccagcactttgggaggctgaggcgggt--- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418798 59 + 4669795 GGCAACCATAgtggctcacgtctgtaatcccagcactttgggaggctgaggcgggtgga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375833 59 + 135778131 gccaaccatagtggctcacgtctgtaatcccagcactctgggaggttgaggcgggtgga i chlSab2.chr7 C 0 I 4 s manLeu1.NW_012102221v1 2842622 59 - 2847728 gccaaccatagtggctcacgtctgtaatcccagcactttgggaggctgaggcgggtgga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941610 59 + 2368649 gccaaccatggtggctcacgcctgtaatctcagcactttgggaggctgaggcgggtgga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674421 58 - 190850796 gctgggtgtggtggctcatgcctgtaatcctggcagt-tgggaggctgaggtgggtgga i calJac3.chr3 T 401 C 0 s saiBol1.JH378165 13164754 58 - 14256875 gctgggtgtggtggcttatgcctgtaaacctggcact-tgggaggctgaggtgggtaga i saiBol1.JH378165 T 405 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=18076.000000 s hg38.chr4_KI270789v1_alt 187337 18 + 205944 tcacaaggtcaggagat-c s panTro5.chr4 192972211 18 + 194502333 tcacaaggtcaggagat-c i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856664 18 + 195804263 tcacaaggtcaggagat-c i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888051 18 + 4876863 tcacaaggtcaggagat-c i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779289 18 + 115148730 tcacgaggtcaggagat-c i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 187998827 6 + 189454096 -----------ggaaac-- i macFas5.chr5 C 0 I 1 s cerAty1.NW_012001672v1 3418857 3 + 4669795 --------------aac-- i cerAty1.NW_012001672v1 C 0 I 2 s manLeu1.NW_012102221v1 2842681 3 - 2847728 --------------aac-- i manLeu1.NW_012102221v1 C 0 I 2 s colAng1.NW_012116221v1 941669 18 + 2368649 tcatgaggtcaggaaacg- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674479 18 - 190850796 tcacaaggtcaagagat-t i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164812 18 - 14256875 tcacaaggtcaagagat-t i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e chlSab2.chr7 134375892 4 + 135778131 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e rheMac8.chr5 189055153 4 + 190429646 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=184079.000000 s hg38.chr4_KI270789v1_alt 187355 30 + 205944 aagaccatcctggctaacacggtgaa-----------acta s panTro5.chr4 192972229 30 + 194502333 aagaccatcctggctaacacggtgaa-----------acta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856682 30 + 195804263 aagaccatcctggctaacacggtgaa-----------acta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888069 30 + 4876863 aagaccatcctggctaacacagtgaa-----------acta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779307 30 + 115148730 aagaccatcctggctaacatgctgaa-----------acta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055157 41 + 190429646 gagaccatcctggctgacacggtgaagccccatctctacta i rheMac8.chr5 I 4 C 0 s macFas5.chr5 187998834 41 + 189454096 gagaccatcctggctgacacggtgaaaccccatctctacta i macFas5.chr5 I 1 C 0 s cerAty1.NW_012001672v1 3418862 40 + 4669795 -agaccatcctggctgacacggtgaaaccccatctctacta i cerAty1.NW_012001672v1 I 2 C 0 s chlSab2.chr7 134375896 41 + 135778131 gagaccatcctggctgacacggtgaaaccccatctctacta i chlSab2.chr7 I 4 C 0 s manLeu1.NW_012102221v1 2842686 40 - 2847728 -agaccatcctggctgacacggtgaaaccccgtctctacta i manLeu1.NW_012102221v1 I 2 C 0 s colAng1.NW_012116221v1 941687 41 + 2368649 gagactatcctggctaacacagtgaaaccccatctctacta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674497 41 - 190850796 gagaccattctgaccaacatggtcaaatcccatctctacta i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164830 41 - 14256875 gagactgtcctggccaacatggtcaaatcccatctctacta i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004809 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=84357.000000 s hg38.chr4_KI270789v1_alt 187385 16 + 205944 aaaatac-aaaaaatta s panTro5.chr4 192972259 16 + 194502333 aaaatac-aaaaaatta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856712 16 + 195804263 aaaatac-aaaaaatta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888099 16 + 4876863 aaaatac-aaaaaatta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779337 14 + 115148730 aaaatac---aaattta i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055198 17 + 190429646 aaaatacaaaaaaatta i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998875 17 + 189454096 aaaatacaaaaaaatta i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418902 17 + 4669795 aaaatacaaaaaaatta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375937 17 + 135778131 aaaatacaaaaaaatta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842726 17 - 2847728 aaaatacaaaaaaatta i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941728 17 + 2368649 aaaattcaaaaaaatta i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674538 15 - 190850796 aaaatac--aaaaatta i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13164871 15 - 14256875 aaaatac--aaaaatta i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 17004809 16 - 59632846 ACAGCAT-AAGAATTTA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=755421.000000 s hg38.chr4_KI270789v1_alt 187401 151 + 205944 gccgggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaagcaggagaatggcatgaacctgggaggcggagcttgcagtgagctgagatcgagccatcgcactccaggctgggtgacagagtgagactccgtctcaaaaa- s panTro5.chr4 192972275 136 + 194502333 gccgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaagcaggagaatggcgtgaacccaggaggcggagcttgcagtgagct--------------gcactccaggctgggtgacagagcgagactccgtctc-aaaa- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856728 136 + 195804263 gccgggcgtggtagtgggcgcctgtagtcccagctacttgggaggctgaagcaggagaatggcgtgaacccaggaggcggagcttgcagtgagct--------------gcactccaggctgggtgacagagcgagactccgtctc-aaaa- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888115 150 + 4876863 gctgggcgtggtggtgggcgcctgtagtcccagctacttgggaggctgaagcaggagaatggcatgaacccgggaggcggagcttgcagtgagctgagatcgagccattgcactccaggctgggtgacagagtgagactccgtctc-aaaa- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779351 147 + 115148730 gccaggtgtg---gcaggcacatgtagtcctagctactcaggagggtgaggcaggagaatggtgtgaacccaggaggcagagcttgcagtgagctgagatcgagccattgcactccggtctgggtgacagagtgagactctatcta-aaaa- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055215 148 + 190429646 gcggggtgcggtggc-ggcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccggggggcggagcttgcagtgagctgagatcgcgccac-ttactctagcctgggcgacagagcgagactccgtcca-aaaa- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187998892 148 + 189454096 gccgggcgaggtggc-ggcgcctgtggtcccagctactcgggaggctgaggcaggagaacggcgtaaacccggggggcggagcttgcagtgagccgagatcgcgccac-ttactctagcctgggcgacagagcgagactccgtcca-aaaa- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3418919 148 + 4669795 gccaggcgtggtggc-ggcacctgtagtaccagctactcgggaggctgaggcaggagaatggcgggaacccggggggcggagcttgcagtgagctgagatggcgccac-ttacactagcctgggccacagagcgagactccgtcaa-aaaa- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134375954 148 + 135778131 gcggggtgcggtggc-cgcgcctgtggtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggtggagcttgcagtgagctgagattgtgccac-tcactccagtctgggcgacagagcgagactccgtcaa-aaaa- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842743 148 - 2847728 ccggggtgcggtggc-ggcgcctgtggtcccagctactccggaggctgaggcaggagaatggcgggaacccggggggcggagcttgcagtgagctgagatggcgccgc-tcactccagcctgggccacagagcgagactccgtcaa-aaaa- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941745 149 + 2368649 gccgggcacagtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgggaaccagggaggtagacgttgcagtgagccaagatcgcgccac-tcactccagcctgggcaacagagtgagattccgtcaa-aaaa- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674553 150 - 190850796 gccagccatggtggcgcgtgcctgtagtcccagctactcaggcggctgaggcaggagaattgcttgaacccaggaggtggagtttgtagtgagccgagattgtgccactgcacttcagcct-ggtgacagagcgagattctgtctc-aaaaa i calJac3.chr3 C 0 I 105 s saiBol1.JH378165 13164886 150 - 14256875 gccagccatggtggtgcgtgactgtagtctcagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgtagtgagccgagattgtgccactgcactccagcct-ggtgacagagagagactctgtatc-aaaaa i saiBol1.JH378165 C 0 I 109 e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004825 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=10010.000000 s hg38.chr4_KI270789v1_alt 187552 2 + 205944 aa s panTro5.chr4 192972411 2 + 194502333 aa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856864 2 + 195804263 aa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888265 2 + 4876863 aa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779498 2 + 115148730 aa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055363 2 + 190429646 aa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999040 2 + 189454096 aa i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419067 2 + 4669795 aa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376102 2 + 135778131 aa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842891 2 - 2847728 aa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941894 2 + 2368649 aa i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189674703 105 - 190850796 I e cebCap1.NW_016107886v1 1060065 0 - 2196201 C e dasNov3.JH570353 1511607 0 - 2520184 C e canFam3.chr16 17004825 0 - 59632846 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e saiBol1.JH378165 13165036 109 - 14256875 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=6249.000000 s hg38.chr4_KI270789v1_alt 187554 10 + 205944 a---------aG-------TTTGTTT s panTro5.chr4 192972413 10 + 194502333 a---------aG-------TTTGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856866 10 + 195804263 a---------aG-------TTTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888267 10 + 4876863 a---------aG-------TTTGTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779500 19 + 115148730 aaaaaaaaaTAG-------TATGTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055365 15 + 190429646 aaaaTA----TA-------TATGTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999042 15 + 189454096 aaaaTA----TA-------TATGTTT i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419069 13 + 4669795 aaaa-a----aa-------T-TGTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376104 22 + 135778131 aaaaaa----aaaaaaaaGTATGTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842893 21 - 2847728 aaaaaa----aaaaaaaa-TATGTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941896 15 + 2368649 aaaaaa----aG-------TATGTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674808 12 - 190850796 ---AAA----AG-------TATGATC i calJac3.chr3 I 105 C 0 s saiBol1.JH378165 13165145 12 - 14256875 ---AAA----AG-------TATGGTC i saiBol1.JH378165 I 109 C 0 s cebCap1.NW_016107886v1 1060065 12 - 2196201 ---AAA----AG-------TTTGGTC i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 17004825 10 - 59632846 -----A----AG-------TGTATCT i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1511607 0 - 2520184 C e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3448298 3 - 5030052 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=9090.000000 s hg38.chr4_KI270789v1_alt 187564 1 + 205944 T s panTro5.chr4 192972423 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856876 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888277 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779519 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055380 1 + 190429646 T i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999057 1 + 189454096 T i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419082 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376126 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842914 1 - 2847728 T i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941911 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674820 1 - 190850796 T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165157 1 - 14256875 T i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1060077 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3448301 1 - 5030052 T i aotNan1.NW_018492112v1 I 3 C 0 s canFam3.chr16 17004835 1 - 59632846 C i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1511607 0 - 2520184 C e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=339240.000000 s hg38.chr4_KI270789v1_alt 187565 35 + 205944 CCACTTGTGTGTGGTAGCCAGGTGAACAGTC-CAGC s panTro5.chr4 192972424 35 + 194502333 CCACTTGTGTGTGGTAGCCAGGTGAACAGTC-CAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856877 35 + 195804263 CCACTTGTGTGTGGTAGCCAGGTGAACAGTC-CAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888278 35 + 4876863 CCACTTGTGTGTGGTAGCCAGGTGAACAGTC-CAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779520 35 + 115148730 CCACTTGGGTGTGGTAGCCAGGTGAACAGTC-CAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055381 35 + 190429646 CCCCTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999058 35 + 189454096 CCCCTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419083 35 + 4669795 CCCCTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376127 35 + 135778131 CCCCTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842915 35 - 2847728 CCCCTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941912 35 + 2368649 CCCCCTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674821 35 - 190850796 CCACCTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165158 35 - 14256875 CCACTTGTGTCTGGTAGCCAGGTGACCAATC-CAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1060078 35 - 2196201 CCACGTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i cebCap1.NW_016107886v1 C 0 I 14 s aotNan1.NW_018492112v1 3448302 35 - 5030052 CCACTTGTGTCTGGTAGCCAGGTGAACAGTC-CAGC i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17004836 33 - 59632846 CCTTCTGTCTCTTGCTGCCAGAAGAAT--CC-CAGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511607 29 - 2520184 CCTCTT-------GCTGCCAACTGAACAATCTCAGC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=70598.000000 s hg38.chr4_KI270789v1_alt 187600 14 + 205944 CAAACAGTGACACC--- s panTro5.chr4 192972459 14 + 194502333 CAAACAGTGACACC--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856912 14 + 195804263 CAAACAGTGACACC--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888313 14 + 4876863 CAAACAGTGACACC--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779555 14 + 115148730 CAAACAGTGACACC--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055416 13 + 190429646 CAAACAATTACA-T--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999093 13 + 189454096 CAAACAATTACA-T--- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419118 13 + 4669795 CAAACAATTACA-T--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376162 13 + 135778131 CAAACAATTACA-T--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842950 13 - 2847728 CAAACAATTACA-T--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941947 13 + 2368649 CAAACAATTATA-C--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674856 13 - 190850796 CAAACAATTACA-T--- i calJac3.chr3 C 0 I 3 s saiBol1.JH378165 13165193 11 - 14256875 --AACAATTACA-T--- i saiBol1.JH378165 C 0 I 3 s aotNan1.NW_018492112v1 3448337 11 - 5030052 --AACAATTACA-T--- i aotNan1.NW_018492112v1 C 0 I 3 s canFam3.chr16 17004869 13 - 59632846 CAAATAATTATG-T--- i canFam3.chr16 C 0 I 3 s dasNov3.JH570353 1511636 16 - 2520184 CAAACAATTGGA-TCTC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1060113 14 - 2196201 I e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2652552.000000 s hg38.chr4_KI270789v1_alt 187614 326 + 205944 CCTAGAGAAGATA-TTGA-GCATGATTTCTTTCTGTTT-TCCTTTTC-TTTTT-----TTAACACAAATGATTTCATCCTACAG--GTTGGTTTCAGCCTTTCTTTTATCACTTATCTATT--CACACAA--AGATAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAGCAGCACAGAAAGA---GTTACCATCGTCTTTTTAATGG---------------CCATAAAAATATATCATAATTGATTTGACCGGTTGAACATTTAAAGTATTTGCAAGTGAATCTTGCtgtgcagacatcatttagagtgtgtgtagtatgtccataggataaattccta- s panTro5.chr4 192972473 326 + 194502333 CCTAGAGAAGATA-TTGA-GCATGATTTCTTTCTGTTT-TCCTTTTC-TTTTT-----TTAACACAAATGATTTCATCCTACAG--GTTGGTTTCAGCCTTTCTTTTATCACTTATCTATT--CACACAA--AGATAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAGCAGCACAGAAAGA---GTTACCATCGTCTTTTTAATGG---------------CCATAAAAATATATCATAATTGATTTGACCGGTTGAACATTTAAAGTATTTGCAAGTGAATCTTGCtgtgcagacatcatttagaatgtgtgtagtatgtccataggataaattccta- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192856926 325 + 195804263 CCTAGAGAAGATA-TTGA-GCATGATTTCTTTCTGTTT-TCCTTTTC--TTTT-----TTAACACAAATGATTTCATCCTACAG--GTTGGTTTCAGCCTTTCTTTTATCACTTATCTATT--CACACAA--AGATAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAGCAGCACAGAAAGA---GTTACCATCGTCTTTTTAATGG---------------CCATAAAAATATATCATAATTGATTTGACCGGTTGAACATTTAAAGTATTTGCAAGTGAATCTTGCtgtgcagacatcatttagaatgtgtgtagtatgtccataggataaattccta- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888327 326 + 4876863 CCTAGAGAAGATA-TTGA-GCATGATTTCTTTCTGTTT-TCCTTTTC-TTTTT-----TTAACACAAATGATTTCATCCTACAG--GTTGGTTTCAGCCTTTCTTTTATCACTTATCTATT--CACACAA--AGATAAGTACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAGCAGCACAGAAAGA---GTTACCATCGTCTTTTTAATGG---------------CCATAAAAATATATCATAATTGATTCGACCGGTTGAATATTTAAAGTATTtgcaagtgaatcttgctgtgcagacatcatttagaatgtgtgtagtatgtccataggataaattccta- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779569 327 + 115148730 CCTAGAGAAGATA-TTGA-GCATGATTTATTTCTGTTT-TCCTTTTCTTTTTT-----TTAACACAAATTATTTCATCCTACAG--GTTAGTTTCAGCCTTTCTTTTATCACTTATCTATT--CACACAA--AGACAAGCACGTGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAGCAGCACAGAAAGA---GTTACCATCATCTTTTTAATGG---------------CCGTAAAAATATGTCATAATTGATTTGACCAGTTGAACATTTAAAGTATTtgcaagtgaatcttgctgtgcagacatcatttagaatgtgtgtagtatgtctgtaggataaattccta- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055429 321 + 190429646 CCTAGAGAAGATA-TTGA-GCATGATTTCGTTCTGTTT-TCCTTT---CTTTT-----TTTACACAAATGATTTCATCCTACAC--GTTAGTTTCAGCCTTTCTTTTATCACTTACCTGTT--TACACAA--AGACAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAACAGCACAGAAAGA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAATATATCATAAGTGATTTGACCAGTTGAACATTTAAAGTATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccataggataaattccta- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999106 321 + 189454096 CCTAGAGAAGATA-TTGA-GCATGATTTCGTTCTGTTT-TCCTTT---CTTTT-----TTTACACAAATGATTTCATCCTACAC--GTTAGTTTCAGCCTTTCTTTTATCACTTATCTGTT--TACACAA--AGACAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAACAGCACAGAAAGA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAATATATCATAAGTGATTTGACCAGTTGAACATTTAAAGTATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccataggataaattccta- i macFas5.chr5 C 0 C 0 s cerAty1.NW_012001672v1 3419131 321 + 4669795 CCTAGAGAAGATA-TTGA-GCATGATTTCGTTCTGTTT-TCCTTT---CTTTT-----TTTACACAAATGATTTCATCCTACAC--GTTAGTTTCAGCCTTTCTTTTATCACTTATCTGTT--TACACAA--AGACAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTCTATTCCACAACAGCACAGAAAGA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAATATATCATAAGTGATTTGACCAGTTGAACATTTAAAGTATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccataggataaattccta- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376175 319 + 135778131 CCTAGAGAAGATA-TTGA-GCATGATTTCGTTCTGTTT-TCCTTT---CTTTT-----TTTACACAAATGATTTCATCCTACAC--GTTAGTTTCAGCCTTTCTTTTATCACTTATCTGTT--TACACAA--AGACGAGCACATGTGCAAGCACATACACTTTTTTCT--TC--TCTCTTTATTCCACAACAGCACAGAAAAA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAATATATCATAAGTGATTTGACCAGTTGAACATTTAAAGAATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccgtaggataaattccta- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2842963 321 - 2847728 CCTAGAGAAGATA-TTGA-GCATGATTTCGTTCTGTTT-TCCTTT---CTTTT-----TTTACACAAATGATTTCATCCTACAC--GTTAGTTTCAGCCTTTCTTTTATCACTTATCTGTT--TACACAA--AGACAAGCACATGTGCATGCACACACACTTTTTTCTTCTC--TCTCTTTATTCCACAACAGCACAGAAAGA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAATATATCATAAGTGATTTCACCAGTTGAACATTTAAAGTATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccataggataaattccta- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 941960 313 + 2368649 CCTAGAGAAGATA-TTGA-GCATGATTTCTGTCTGTTT-TCCTTT---CTGCT-----TTTACACAAATGATTTCATTCTACAC--GTTAGTTTCAGCCTTTCTTTTATCGCTTATCTGTT--TACACAA--AGCCAAGCGCATGTGCATGCACACACTCTTGTTTCT----------TCTATTCCACAGCAGCAGAGAAAGA---GTTACCATAGACTTTTAAATGG---------------CTATAAAAACATATCATAAGCGATTTGACCAGTTGAACGTTTAAAGTATTtgcaagtgaatct---tgtgcagacatcatttagaatgtgtgtagtatatccatagggtaaattccta- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189674872 305 - 190850796 CCTAGACAAAATA-TTCA-GCATGATTTCTTTTTGTTTTTTCTTTTC-----------TTAACACATATGATTTCATCCCACAT--GTTATTTTCAGC----CCTTTATCACATAACTACT--CACACA------CACGTGCATGTGCATGCACACACGCTTTTTTCTCCCC--TCTCTTTATTCCACAGCAGCAC----AGA---GTTACCATCCTCTTTTTAAGGG---------------CTATAAAAAT-----ACAATTAATTTGCTCAGTTGGACATTTAAAGTATTTGCAAATGGATCTTctggtgcagacataatttagaatgtgtgtagtatgtccactggataaattccta- i calJac3.chr3 I 3 C 0 s saiBol1.JH378165 13165207 318 - 14256875 CCTAGAGAAAACA-TTCA-GCATGATTTCTTTTTGTTTCTTCTTTTC-TTTTT-----TTAACACAAATGATTTCATCCCACGT--GTTAGTTTCAGCCTATCTTTTATCACGTAACTACTCACACACA------CACGCGCATGTGCATGCACACACACTTTTTTCTTCCC--TCTCTTTATTCCACAGCAGCACAG--AGA---GTTACCATCCTCTTTTTAATGG---------------CTATAATAAT-----ATAATTAATTTGATCAGTCGGACATTTAAAGTATTTGCAaatggatcttctggtgcagacatcatttagaatgtgtgtagtatgtccactggataaattccta- i saiBol1.JH378165 I 3 C 0 s cebCap1.NW_016107886v1 1060127 309 - 2196201 CCTAGAGAAAATA-TTCA-GCATGAtttctt----ttttttcttttc-ttttt-----ttAACACAAATGATTTCATCCCACAT--GTTAGTTTCAGCCTATCTTTTATCACGTGACTACT----CACA------CACGCGCATGTGCATGCACACGTGCTTTTTTCTTCCC--TCTCTGTATTCCACAGCAGCACAG--AGA---GTTACCATCCTCTTTTTAATGG---------------CTGTAA-AAT-----ATAATTAATTTGATCAGTTGGACATTTAAAGTATTTGCAaatggatcttctggtgcagacatcatttagaatgtgtatagtatgtccattggataaattcctg- i cebCap1.NW_016107886v1 I 14 C 0 s aotNan1.NW_018492112v1 3448351 316 - 5030052 CTTACAGAAAATA-TTCA-GCATGATTTCAttttgttttttcttttc-ttttt-----ttAACACAAATGATTTCATCCCACAT--GTTAGTTTCAGCCTATCTTTTATCATGTAACTACT--CACACA------CACGAGCATGTGCATGCACACACGCTTTTTTCTTCCC--TCTCTTTATTCCACAGCAGCACAG--AGA---GTTACCATCCTCTTTTTAATGG---------------CTATAAAAAT-----ACAATTAATTTGATCAGTTGGACATTTAAAGTATTCGTAaatggatcttctggtgcagacatcatttagaatgtgtgtagtatgtccattggataaattccta- i aotNan1.NW_018492112v1 I 3 C 0 s canFam3.chr16 17004885 287 - 59632846 CCTAGCGAAGATATTTGA-GTGTGATTT--TTTTGTTT-TCCTACCCTTTCTT-----TTTA---ATATAATTTTATCCTACAA--ATTAGTTTCAA-----CGTTTATCACTTAGC------TCCACAG--AG------GAGTGTGCTTGCACACACACCTGTGGGCACACATACTCTTTGTTCCACATCAGCACAG---GA---GCT--------TATTTTAATGG---------------Ctataagaatgtct-ataattgatttgaccagttggacatctaggttatttccaaataaatct---tacacagatgtcatttagatagtgtgt--------tactggataaattccta- i canFam3.chr16 I 3 C 0 s dasNov3.JH570353 1511652 313 - 2520184 TCTAGAGAAGCTG-TGCATGCCTGATTTCTTTTTGTTT-TGTTTT---CTTTTACCTATTAACACA-GCGATTTCATCCTACACCTGCCAGTGTGAGC----CTCTTATCACTTAGCGACA--CTCTCCAGCACACACATACAACCGCGTGCACA-------------------CCTCTTCA-TCCACATCTGCACAGGAAGACGGGCTGC-----TCCTTTTAACGGCTGAGTTGTGTTTCACTGCAGTACCATGTCACGACTGAATTGGCCAGTTAGACACGT----TATGAACAGATAaatct---tgtatagactgcattcagaagatgt-----agatctatcggatgaattcccaa i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e macNem1.NW_012013133v1 24389174 660 - 25927173 M e otoGar3.GL873580 11285365 1551 - 11315646 I a score=5203134.000000 s hg38.chr4_KI270789v1_alt 187940 526 + 205944 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcttcagtggatagtatataaatctatatttccactagta-atgcatgac--tgcatgttttcctcacagtgccacccacacactgtgtcatcaacatttgtgaactgtattaacctg-agagataaaat----atgttatgtaattaagttttaatttgtaacttttcctttataagtgagattgagGTTTCC-CCCACTTTCATATGGTCTTCCCGTTTGTTCACCAG------ACTATTAGTCTTTTCCCAGATGATT--C--ATGAAAACTGGACATGTTAAGAATATGAACCCCTTAGCTATTAAAATGGTTGTA-----ATTTTTTCCAAG----TTTTTTTTGTATTGTTTATGGAATTATTTTATATATagattttaa--tttttatgcaattaaacatgtttattttatata-ttggagcattttgtcat-attaca---aaatccttctccaattcca---aactttaaaattcttttttcccaatttattt s panTro5.chr4 192972799 527 + 194502333 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcttcagtggatagtatataaatctatatttccactagta-atgcattac--tgcatgttttcctcacagtgccacccacacactgtgtcatcaacatttgtgaactgtattaacctg-agagataaaat----atgttatataattaaattttaatttgtaacttttcctttataagtgaggttgagGTTTCC-CCCACTTTCGTATGGTCTTCCCGTGTGTTCACCAG------ACTATTAGTCTTTTCCCAGATGATT--C--ATGAAAGCTGGACATATTAAGAATATGAACCCCTTAGCTATTAAAATGGTTGTA-----ATTTTTTCCAAG---TTTTTTTTTGTATTGTTTATGGAATTATTTTATATATAGATTTTAA--TTTTTATGCAATTAAACGTGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCCCAATTTATTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192857251 525 + 195804263 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcttcagtggatagtatataaatctatatttccactagta-atgcattac--tgcatgttttcctcacagtgccacccacacactgtgtcatcaacatttgtgaactgtattaacctg-agagataaaat----atgttatataattaaattttaatttgtaacttttcctttataagtgaggttgagGTTTCC-CCCACTTTCGTATGGTCTTCCCGTGTGTTCACCAG------ACTATTAGTCTTTTCCCAGATGATT--C--ATGAAAGCTGGACATATTAAGAATATGAACCCCTTAGCTATTAAAATGGTTGTA-----A-TTTTTCCAAG----TTTTTTTTGTATTGTTTATGGAATTATTTTATATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCCCAATTTATTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3888653 525 + 4876863 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcct-aattgcttcagtggatagtatataaatctatatttccactagta-atgcatgac--cgcatgttttcctcacagtgccacccacacattgtatcatcaacatttgtgaactgtattaacctg-agagataaaat----atgttatataattaagttttaatttgtaacttttcctttataagtgaggttgagGTTTCC-CCCACTTTCGTATGGTCTTCCCATTTGTTCACCAG------ACTATTAGTCTTTTCCCAGATGATT--C--ATGAAAGCTGGACATGTTAAGAATATGAACCCCTTAGCTGTTAAAATGGTTGTA-----ATTTTTTCCAAG---TTTTTTTTTGTATTGTTTATGGAATTATTTTATATATAGATTTTAA---TTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAAAGCCA---AACTTTAAAATTCTTTTTTCCCAATTTATTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112779896 521 + 115148730 gaagagaaattattaggcaaaagaaatcatacat------ttttaagaaatattcctaaattgcttcaggggatggtatataaatctatatttccactagta-atgcatgac--tgcatgttttcctcacaccgccacccacacactgtgtcgtcaacattcgtgaactgtattaacctg-agagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgaggttgagGTTTCC-CCCACTTTTGTGTGgtcttcccatttgttcaccag------actattagtcttttctcaaatgatt--c--atgaaagctggacacgttaagaatatgaaccccttagctgttaaaatggttgta-----attttttccaag--ttttttttttgtattttttatggaattattttatatatagattttaa--tttttatgtaattaaacatgttta-tttatata-ttggagcattttgtcat-attaca---aaatccttctccaattcca---aactttaaaattcttttttcccaatttattt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189055750 517 + 190429646 gaagcaaaattattaggcaaaagaaatcatgcatttttaactttaagaaatattcctaaattgcttcagtggatagtatataaatctgtattttca-tagta-atatgtaag--tgcatgctttcctcaaactgccaccaacacactatgtcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgagattgaggtttcc---------tatgtGGTCTTCCTATTTGTTCACCAG------ACTACTAGTGTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCATAGCTGTAAAA---GTTGTA-----ATTTTTTCGAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTTGCAATTTCttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999427 517 + 189454096 gaagcaaaattattaggcaaaagaaatcatgcatttttaactttaagaaatattcctaaattgcttcagtggatagtatataaatctgtattttca-tagta-atatgtaag--tgcatgctttcctcaaactgccaccaacacactatgtcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgagattgagGTTTCC---------TATGTGGTCTTCCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCATAGCTGTAAAA---GTTGTA-----ATTTTTTCGAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTTGCAATTTCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24389834 517 - 25927173 gaagcaaaattattaggcaaaagaaatcatgcatttttaactttaagaaatattcctaaattgcttcagtggatagtatataaatctgtattttca-tagta-atatgtaag--tgcatgctttcctcaaactgccaccaacacactatgtcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagtttaaatttgtaacttttcctttataagtgagattgaggtttcc---------tatgtGGTCTTCCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCATAGCTGTAAAA---TTTGTA-----ATTTTTTCGAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCGCAATTTCttt i macNem1.NW_012013133v1 M 660 C 0 s cerAty1.NW_012001672v1 3419452 517 + 4669795 gaaacaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcttcagtggatagtatataaatctgtatttcca-tagta-atatgtaag--tgcatgctttcctcaaactgctaccaacacactatgtcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgagattgaggtttcc---------tatgtGGTCTTCCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCATAGCTGTAAAA---GTTGTA-----ATTTTTTCCAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCGCAATTTCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134376494 517 + 135778131 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcctcagtggatagtatataaatctatatttcca-tagta-atatgtaag--tgcatgctttcctcaaagtgccaccaacacactatatcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgagattgagGTTTCC---------TATGTGGTCTTCCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCTTAGCTGTAAAA---GTTGTA-----ATTTTTTCCAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCACAATTTCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2843284 517 - 2847728 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcttcagtggatagtatataaatctgtatttcca-tagta-atatgtaag--tgcatgctttcctcaaactgccaccaacacactatgtcatcaatatttgtgaactgtattaacctg-atagataaaat----atgttatataattgagttttaatttgtaacttttcctttataagtgagattgaggtttcc---------tatgtGGTCTTCCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACACGTTAAGAATATGAACCCCATAGCTGTAAAA---GTTGTA-----ATTTTTTCGAAGTTTTATTTTTTCCTATTGTTTATGGAATTATTTT-TATATAGATTTTAA--TTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCAT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCGCAATTTCTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 942273 522 + 2368649 gaagcaaaattattaggcaaaagaaatcatgcgtttttaattctaagaactattcctaaattgcctcagtggatagtatataaatctatatttccactagta-atgtgtaag--tgcatgctttcctcaaactgccaccaacacactatgtcatcagtatttgtgaactgtaataacctg-atagataaaat----atgttatataattgagtttcaatttgtaacttttcctttataagtgagattgagGTTTCC---------CATGTGGTCTTTCTATTTGTTCACCAG------ACTACTAGTCTTTTCCCAAATGATT--C--ATGAAAGCTGGACATGTTAAGAATATAAACCCCTTAGCTGTTAAAATTGTTGTA-----ATTTTTTCCAAGTTTTATTTTTTCCTATTGTTTATGGACTTATCTT-TATATAGATTTTAA-TTTTTTATGCAATTAAACATGTTTATTTTATATA-TTGGAGCATTTTGTCGT-ATTACA---AAATCCTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCACAATTTCTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189675177 529 - 190850796 gaagcaaaattattaggcaaaagaaatcatgcgtttttaattttaagaaatattcctaaattgccttggtggatagaatataaatctgtatttccaccagta-acacatgag--tgcatgttgtcctcacgccactaccaacacactgtgttatcagaacttgtgaactctattcacctg-agagataaaat----gcgttctataattgagttttaatttgtaacttttccttt----gtgaggttgagatt--a-cccactttcatatgGTCTCCCCATGTGTTCACTGGACTGTTACTATTAGTCTTTCCCCAAATGATT--T--ACAAAAGCTGGGCACATTAAGGATATGAACCCCTTCGCTGTTAAAATTGTTGTA------TTTTTTCCAAGTTTTATTTGTTTGTTTTGTTTATGGAATTATTTTATACGTAGATTTTAA--TTTTCATGCAGTTAGACATGTTTATTTTATATA-TTGGAGGCTTTTGTTGT-ATTGCA---AAATCTTTCTCCAATTCCA---AACTTTAAAATTCTTTTTTCACAGTTTCTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13165525 488 - 14256875 gaagcaaaattattaggtaaaagaaatcatgcatttttaattttaagaaatatttctaaattgcctcagtggatagaatataaatctgtatttccaccagta-atacatgag--tgcatgttttcctcacactgctatcaacacactgtgtt----------------------------------------------GGTATATAATTGAGTTTTAATTTGTAACCTTTCCTGTATAAGTGAGGTTGAACTTTCC-CCCACTTTCATATGgtcttcccatttgttcactg-------actgttagtcttttcccaaatgatt--c--acaaaagctgggcacactaagaatatgaaccccttcgctgttaaaattgttgta-----tttttttccaagttttatttttttgttttgtttacggaattattttatatgtagattttaa--tttttatgcagttagacatgtttattttatata-ttgaaggcttttgttgt-gttaca---aaatctttctctaattcca---aactttaaaattcttttttcacaatttcttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1060436 535 - 2196201 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaacattcctaaattgcctcagtggatagaatataaatctgtatttccaccagta-acacatgag--tgcatgttttcctcacactgctaccaacacagtgtgtcaccagaatttgcgaactctgttcacctg-agacgtaaaat----atgttatataattgagttttaatttgtaacctttcctttataaatgaggctgagatttcc-cccactttcatatggtcttcccatttgtTCACTGGACTGTTACGATTAGTCTTTCCCCAAGTGATT--C--ATGAAAGCTGGGCACATTAAGAATATGAACCCCTTCACTGTTAAAATTGTTGTA------TTTTTTCCAAGTTTTATTTTTTTGTTTTGTTTATGGAATTATTTTATATGTAGATTTTAA--TTTTTATGCAGTTAGACATGTTTATTTTATATA-TTGGAGGCTTTTGTTGT-ATTACA---AAATCTTTCCCCAATTCCA---AACTTTAAAATTCTTTTATCACAATTTCTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3448667 529 - 5030052 gaagcaaaattattaggcaaaagaaatcatgcatttttaattttaagaaatattcctaaattgcctcagtggatagaatataaatctgtattttcaccagta-atgcatgag--tgtatgttttcctcacaccgctaccaacacactgtgtcatcagaatttgcgaactctattcacctg-agagataaaat------gttatataattgagttttaatttgtaacttttcctttatatgtgaggttgagatttcc-cccactttcatatggtcttcccatttgtTCACTGGACTGTTACTATTAGTCTTTTCCCAAATGATT--C--ACGAAAGCTGGGCACATTAAGAATATGAACCCCTTCGCTGTTAAAA---TTGTA------TTTTTTCCAAGTTTTATTTTTTTGTTCTGTTTATGGAATTATTTTATATGTAGATTTTAA--TTTTTATGCAGTTAGACATGTTTATTTTATATA-TTGGAGGCTTTTGTTGT-ATTACA---AAATCTTTCTTCAACTCCA---AACTTTAAAATTCTTTTTTCACAATTTC-TT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17005172 506 - 59632846 gaaggagaattattaggc-aaagaaattacacat-ttcaattttgagaaatactgccaaattgcctctgtagttg---tattaatctgtatttccaccggca-acgtgtgagaatgcatgcttttctgatacc-ccattgacgcacagtatcattatatttt------ttTTTTAAGTTATAGGGATATGATACCTATGTTACATAGCTGAGCTTTAATTTGTA------------CAAGTGGGGCTGAGATTTTCCCCCACATGCATCTGGTCTTCCCAATTGTTCATTGG------ATCACTGGTCTTTTCCCAACTAATT--CATATGGATGCTGGAGAGGTTAAGAATAGGAGTTCCTTAACTGTTAATGGAATTATA-----ACCTTTCCCAG-------TTTTATCTTTTGTTTATAGAATTATTTCACATGCAG--TTTTA--TTTTTATGTAGTTAAATACAGCTA-TTTATATATTTTGAGCTTTTTGTCATAAAAACA---AGAACTTTCTCAAATCCAA---CACTAcagcactgtattttg--agttgagct i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1511965 522 - 2520184 aaagtggaattaccaggcaaaaggaattgtacattttcaattttgaaaaatattgccaaactgcctttgcaga-gttatataaatctctattttcaccagtatgcaagagaa--cgcatgcttgcctcacatt-ctaccaccacactgtgtcatcaaaattc-tcaactcaagtaatcta-ataagtgaaat----gtgctctccaattgcgctttgacttgt--cttttccactgtgtgtg----tgaatactcc-tctgtg--catatgGTCTTTCCTGTTGTTCCTCGG------ACTAGTGTTCTCTTTCCAACTGATTTGC--ACAAATGTGGCACATGTTAAAAATATCAACTCTATTTCAGTTAAAGAAATTGTATTAACAATTTTTATAAGTTTTCATTTCTT-TTTTGTTTAT-TAATCATATTGTATGAAGATTTAAAATTTTTTATGTAGTTAAA-----------TATATT-TTTGAGCTTTTTGTCAT-ATTAAATAGTAATTCTTTCACAATTTCATTTAGtttttaaatttaatttactttgtttattt i dasNov3.JH570353 C 0 I 871 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=78426.000000 s hg38.chr4_KI270789v1_alt 188466 7 + 205944 tagcctt s panTro5.chr4 192973326 7 + 194502333 TAGCCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192857776 7 + 195804263 TAGCCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3889178 7 + 4876863 TAGCCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112780417 7 + 115148730 tagcttt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189056267 7 + 190429646 tagcttt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999944 7 + 189454096 TAGCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24390351 7 - 25927173 tagcttt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3419969 7 + 4669795 TAGCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134377011 7 + 135778131 TAGCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2843801 7 - 2847728 TAGCTTT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 942795 7 + 2368649 TAGCTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189675706 7 - 190850796 TAGCTTT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13166013 7 - 14256875 tagcttt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1060971 7 - 2196201 TAGCTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3449196 7 - 5030052 TAGCTTT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17005678 7 - 59632846 ttgcctt i canFam3.chr16 C 0 I 802 e dasNov3.JH570353 1512487 871 - 2520184 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=5961000.000000 s hg38.chr4_KI270789v1_alt 188473 628 + 205944 atatcctgtatttaacatctgtaatttattttagggtaaagtgtgaggtatgtatctcactttatttcttttccagatggtaatttatttattacaatctatcttataaaataaatcacctcctctactgatttgaaatgccacttttattgtataataaattTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACATCATAATTCCTATTTGTATATTGCTCTATTGTTCTTTCTAGTTATTGTCAGTCTAATATTTTGAACTGTTCTCTAAACATACCCATTACAGAAATATAGTCCTGTTTATTTACATATGCATGTTTGCACTT-ATTTATGATGTATGTACTACATAAGAGTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCCTGTCCACATCAC--AAAGT-TTAAGATAAATTAAAAAGTTAAAGTATATATGAAACTATATATGCCTTTTGAGTAAAAACAAGGAAATTCTTTTTCAAAAAGCAAATAAACAAGTTTATTATTTTAGATTCATTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAACGAATGTAAAGACGAAACATGTTGACATCTA-----------CTGTGATAAAGAAAGTTCATTTCC s panTro5.chr4 192973333 627 + 194502333 GTATCCTGTATTTAAcatctgtaatttattttagggtaaagtgtgaggtatgtatctcactttatttcttttccagatggtgatttatttattacaatctatcttataaaataaaccacctcctctactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGCTTATCAAAACTACATCATAATTCCTATTGGTATATTGCTCTATTGTTCTTTCTAGTTATTGTCAGTCTAATATTTTGAACTGTTCTCTAAAAATACCCATTACAGAAATATAGTCCTATTTATTTACATATGCATGTTTGCACTTAATTTATGATGTATGTACTACGTAAGAGTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCCTGTCCACATCAC--AAAGT-TTAAGATAAATTAAAAAGCTAAAGTACATATGAAACTATATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACAAGTTTATTATTTTAGATTCATTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAACGAATGTAAAGACAAAACATGTTGACATATA-------------GTGATAAAGAAAGTTCATTTCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192857783 626 + 195804263 GTATCCTGTATTTAAcatctgtaatttattttagggtaaagtgtgaggtatgtatctcactttatttcttttccagatggtgatttatttattacaatctatcttataaaataaaccacctcctctactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGCTTATCAAAACTACATCATAATTCCTATTGGTATATTGCTCTATTGTTCTTTCTAGTTATTGTCAGTCTAATATTTTGAACTGTTCTCTAAAAATACCCATTACAGAAATATAGTCCtatttatttacatatgcatgtttgcactt-atttatgatgtatgtaCTACGTAAGATTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCCTGTCCACATCAC--AAAGT-TTAAGATAAATTAAAAAGCTAAAGTATATATGAAACTATATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACAAGTTTATTATTTTAGATTCATTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAACGAATGTAAAGACAAAACATGTTGACATATA-------------GTGATAAAGAAAGTTCATTTCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3889185 627 + 4876863 ATATCCTGTATTTAACAT-GGTaatttattttagggtaaagtgtgaggtatgtgtctcactttatttcttttccagatggtgattgatttattacaatctatcttataaaataaaccacctcctctactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACGTTAGCAATATTTTACTGTTTATCAAAACTACATCATAATTCCTATTTGTATATTGCTCTATTGTTCTTTCTAGTTATTGTCAGTCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTATTTATTTACATATGCATGTTTGCACTT-ATTTATGATATATATACTACATAAGAGTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCCTGTCCACATCAC--AAAGT-TTAAGATAAATTAAAAAGTTAAAGTATATATGAAACTATATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACAAGTTTATTATTTTAGATTCATTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAACAAATGTAAAGACGAAACATGTTGACATATA-----------CTGTGATAAAGAAAGTTCATTTCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112780424 628 + 115148730 atattttgtgtttaacatctgtcatttattttaggatgaagtgtgaggtatgtatctcactttatttcttttccagatggtaatttatttattacaatctatctgataaaataaacca-cttctccactgatttgaaatgccacttttattgtataataaatttgtgcacatTAGCAATATTTTACTGTTTATTAAAACTACATCATAATTCCTATTTGTATATTGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAATTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCtatttatttatgtatgcatgtttgcactt-atttatgatgtatgtatTACATAAGAGTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCCTGTCCACATCAC--aaagtattaagataaattaaaaagttaaagtataTATAAAACTCTATATGCCTTTTGAGTAAAAACAAGAAAATTATTTTTCAAAAAGCAAATAAACAAGTTTATTATTTTAGATTCATTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAACAAATGTAAAGACGAAACATGTTGACATATA-----------CTGTGATAAAGAAAGTTCATTTCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189056274 631 + 190429646 atattttgtatttaacatctgtaatttattttagggcaaagtgtgaggtatgtatctcactttatttcttttccagatggtaattcgtttattacaatctatcttataaaataaaccatttcctccactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACTTCATAATTCCTACTTGTATGTAGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTtatttacgtatgcatgtttgcactt-atttatgatgtatgtactatgtaAGAATTGGGGATCAATACATACCAAAATGAAT--TACACTTTTCCTGTCCACATCACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGGGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTATTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCGCTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 187999951 631 + 189454096 ATATTTTGTATTTAACATCTGTAATTTATTTTAGGGCAAAGTGTGAGGTATGTATCTCACTTTATTTCTTTTCCAGATGGTAATTCGTTTATTACAATCTATCTTATAAAATAAACCATTTCCTCCACTGATTTGAAATGCCACTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACGTCATAATTCCTACTTGTATGTAGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTtatttacgtatgcatgtttgcactt-atttatgatgtatgtactatgtaAGAATTGGGGATCAATACATACCAAAATGAAT--TACACTGTTCCTGTCCACATCACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGGGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTATTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCACTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24390358 631 - 25927173 atattttgtatttaacatctgtaatttattttagggcaaagtgtgaggtatgtatctcactttatttcttttccagatggtaattcgtttattacaatctatcttataaaataaaccatttcctccactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACGTCATAATTCCTACTTGTATGTAGCTCTATTGTTCTTTCTAGTTATCGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTTATTTACGTATGCATGTTTGCACTT-ATTTATGATGTATGTACTATGTAAGAATTGGGGATCAATACATACCAAAATGAAT--TACACTGTTCCTGTGCACATCACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGGGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTGTTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCGCTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3419976 631 + 4669795 ATATTTTGTATTTAACATCTGTAATTTATTTTAGGGCAAAGTGTGAGGTATGTATCTCACTTTATTTCTTTTCCAGATGGTAATTCGTTTATTACAATCTATCTTACAAAATAAACCATTTCCTCCACTGATTTGAAATGCCACTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACGTCATAATTCCTACTTGTATGTAGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTtatttacgtatgcatgtttgcactt-atttatgatgtatgtactatgtaAGAATTGGGGATCAATATATACCAAAATGAAT--TACACTGTTCCTGTCCACATGACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTATTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCGCTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGAAAAAGAAAGTTCATTTCC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134377018 631 + 135778131 ATATTTTGTATTTAACATCTGTAATTTATTTTAGGGCAAAGTGTGAGGTATGTATCTCACTTTATTTCTTTTCCAGATGGTAATTCGTTTATTACCATCTATCTTATAAAATAAACCATTTCCTCCACTGATTTGAAATGCCACTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCATAACTACGTCATAATTCCTACTTGTATGTAGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTtatttacgtatgcatgtttgcactt-atttatgatgtatgtactatgtaGGAATTGGGGATCAATGCATACCAAAATGAAT--TTCACTGTTCCTGTCCACATCACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTATTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCGCTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2843808 631 - 2847728 ATATTTTGTATTTAACATCTGTAATTTATTTTAGGGCAAAGTGTGAGGTATGTATCTCACTTTATTTCTTTTCCAGATGGTAATTCGTTTATTACAATCTATCTTATAAAATAAACCATTTCCTCCACTGATTTGAAATGCCACTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACGTAATAATTCCTACTTGTATGTAACTGTATTGTTCTTTCTAGTTATTGTCAGCCTAATATTTTGAACTGTTCTCTAAAGATACCCATTACAGAAGTATAGTCCTGTTTATTTACGTATGCATGTTTGCACTT-ATTTATGATGTATGTACTATGTAAGAATTGGGGATCAATACATACCAAAATGAAT--TACACTGTTCCTGTCCACATCACAAAAAGTGTTAAGATAGATTAAAAATTTAAAGTATATTTGAAGCTACATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACGAGTTCATTATTTTAGATTCTTTTATTG----TAGTTAATACCTTATTTCGCTCCAAGTTTTCTAATAATGAACGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 942802 630 + 2368649 ATG-CTTGTATTTAAcatctgtaatttattttagggtaaagtgtgaggtatgtatctcactttatttcttttccagatggtaattcatttattacaatctatcttataaaataaaccatttcctccactgatttgaaatgccacttttatTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGTTTATCAAAACTACGTCATAATTCCTATTTGTATGTAGCTCTATTGTTCTTTCTAGTTATTGTCAGCCTAATACTTTGAACTGTTCTCTAAAGATACCCATTACAGAAATATAGTCCTGTTTATTTACATATGCATGTTTGCACTT-ATTTATGATGCATGTACTATGTAAGAATTGGGGATCAATACATTCCAAAATAAAT--TACACTGTTCCTGTCCACATCACAAAAAGTGTTAAGATAGATTAAAAAGTTAAAGTATATTTGAAGCTACATATGCCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAAATAAACAAGTTCATTATTTGAGATTCTTTTATTG----TAGTTAACACCTTATTTCGCTCCAAGTTTTCTAATAATGAAGGTAAAGACGAAACATGTTGACATTTA-----------TTGTGATAAAGAAAGTTCATTTCC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189675713 640 - 190850796 CTATGTTGTATTTCACATCTGCCATTTAGGTTAGGGTAAAGTGTGAGGCATGAATCTCACTTTATTTATTTTCCAGATGGTCATTCATTTATTACAATCCATCTGATATAATAAGCCATTTCCTCCACTGATTTGAAATGCCATTTCTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGCTTATCAAGACGAAATCCTCACTCCTATCTATATATTGCTCTATTGTTCTTCATAGTT---GTCAGCCTAATGTTCTGAACTGTCCTCTGAAGATACCCGTGACAGAAATGCACTCCTATGTATTTACAAGTGGATGCTCACACTT-ATTTATGATGTATGTACTATGTAGGATTTGGGGATCAATATGTACCAAAATAAAT--CACATTGTTCCTGTCCACATCACAAAAAATGTTGAGATAAATTAAAAATTTAAAGTATATATGAAAATATGTATGCCTTTTGAGTAGAAACAAGAAAATTCTTTTTCAAAAAGCAGATAAACAAATTTATTATTTTAGATTCACTTATTGCAGTTAGTTAATACCTTATTTCACTTCAAATTTTCTAATAACGAATGTAAAGctgaaacgtg--gacatatacaagtactattttgtgataaagaaagtttattcc- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13166020 637 - 14256875 ctattttgcatttgacatctgtcatttaggttagggtaaagcgtgaggcatgtatctcactttatttattttccagatggtaattcatttattatgatccatcttatgtaataaaccatttcctccactgatttgaaatgccatttttattgtataataagtTTCTTCACATTAGCAATATTTTACTGCTTATCAAAACTAAATCATCATTCCTATTTATATATTGCTCTATTGTTCTTTGTAGTT---GTCAGCCTGATATTCTGAACCGTCCTCTAATGATATCCGTTACAGAAACGTAGTCCTATTTATTTGCATATGGATGTTCGCACTT-ATTTATCATGTATGTACTACGTAAGATTTGGGGATCAATATATACCAAAATAAAT--TACATTGTTCTTGCTCACATCACAAAAAGTGT-----TAAATTAAAAATTTAAAGTATGTATGAAACTATGTATACCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAGATAAACAAATTTATTATTTTAGATTCACTTATTGTAGTTAGTTAAGACCTTATTTTGCTCCAAAGTTTCTAATAACTAATGTAAAGATGAAACATGTTGACATATACAAGTACTGTTTTGTGATAAAGAAAGTTTATTCC- i saiBol1.JH378165 C 0 I 323 s cebCap1.NW_016107886v1 1060978 635 - 2196201 CTATTTTGTATTTAACATCTGTCATTTAGGTTAGGGTAAAGTGTGAGGTATGTATCTCACTTTATTTATTTTCCAGATGGTAATTCATTTATTACAATCCATCTTATATAATAAACCATTTCCTCCACTGATTTGAAATGCCATTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGCTTGTCAAAACTAAATCATCATTCCTATTTGTATATTGCTCTATTGTTCTTTGTAGTT---GTCAGCCTAAGATTCTGAACTGTCCTCTAAAGATATCCATTACAGAAATGTAGTCCTATTTATTTACATATGGATGTTTGCACTT-ATTTATCATGTATGTACTACCTAAGATTTGGGGATCAACATATACCAAAATAAATTACACATTGTTCCTGTCCACATCACAAAAAGTGT-----TAAATTAAAAATTTAAAGTATGTATGAAACTATGTATACCTTTTAAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAGAT----AAATTTATTATTTTAGATTCACTTATTGTAGTTAGTTAATACCTTATTTCGCTCCAAATTTTCTAATAATGAATGTAAAGATGAAACATGTTGACATATACAAGTACTATTTTGTGATAAAGAAAGTTTATTCC- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3449203 640 - 5030052 CTATTTTGTATTTAACATCTGTAATTTAGGTTAGGGTAAAGTGTGAGGTATGTATCTCACTTGATTTATTTTCCAGATGGTAATTCATTTATTACAATCCATCTTATATAACAAACCATTTCCTCCACTGATTTGAAATGCCATTTTTATTGTATAATAAATTTCTGCACATTAGCAATATTTTACTGCTTATCAAAACTATCTCATCATTCCTATTTATATATTGCTCTATTGTTCTTTGTAGTT---GTCAGCCTAATATTCTGAACTGTCCTCTAAAGATATCCATTACAGAAATGTAGTCCTATTTATTTACATATGGATGTTCGCACTT-TTTTGTCATGGATGTACTATGTAAGATTTGGGGATCGATATATACCAAAATAAAT----TATTGTTCCTGTCCACATCACAAAAAGTGTTAAGATAAATTAAAAATTTAAAGTATGTATGAAACTATGTGTACCTTTTGAGTAAAAACAAGAAAATTCTTTTTCAAAAAGCAGATAAACAAATTTATTATTTTAGATTCACTTACTGTAGTTAGTTAATACCTTATTTTGCTCCAAATTTTCTAATAACAAATGTAAAGATGAAACATGTTGACATATACAAGGACTATTTTGTGATAAAGAAAGTTTATTCC- i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1512487 871 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=930106.000000 s hg38.chr4_KI270789v1_alt 189101 93 + 205944 TAGCAGTTAATTCTAAG-------TAGGATGCTGGGCCTATGCAAGTGGTGATGAATAGCATAAATAAGTTAGCTTTTCCAAAAAATTAAATGTTTAGAA s panTro5.chr4 192973960 93 + 194502333 TAGCAGTTAATTCTAAG-------TAGGATGCTGGGCCTATGCAAGTGGTGATGAATAGCATAAATAAGTTAGCTTTTCCAAAAAATTAAATGTTTAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192858409 93 + 195804263 TAGCAGTTAATTCTAAG-------TAGGATGCTGGGCCTATGCAAGTGGTGATGAATAGCATAAATAAGTTAGCTTTTCCAAAAAATTAAATGTTTAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3889812 93 + 4876863 TAGCAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAGTGGTGATGAATAGCATAAATAAGTTAGCTTTTCCAAAAAATTAAATGTTTAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112781052 93 + 115148730 TAGCAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAGTGGTGATGAATAGCATAAATAAGTTAGCTTTTCCAAAAAATTAAATGTTTAGAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189056905 90 + 190429646 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATA---AAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188000582 93 + 189454096 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24390989 93 - 25927173 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3420607 93 + 4669795 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134377649 93 + 135778131 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2844439 93 - 2847728 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCAAAAATTAAATGTTTAGAA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 943432 93 + 2368649 TAGTAGTTAATTCTAAG-------TAGGATGCTGGGCCTATACAAATGGTGATGAATAGCATAAATAAGTTAGCTTTTCCCCAAAATTAAATGTTTAGAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189676353 93 - 190850796 tagcagttaattctaag-------caggatgctgggcctacataagtgatgatcaatagcatagataagttagcttttccaaaaaattaaatgttcagaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13166980 93 - 14256875 TAGCAGTTAATTCTAAG-------TGGGAAGCTGGGTCTATATAAGTGATGATGAATAGCATAAATAAGTCAGCTTTTCCAAAAAATTAAATGTTCAGAA i saiBol1.JH378165 I 323 C 0 s cebCap1.NW_016107886v1 1061613 93 - 2196201 TAGCAGTTCATTCTAAG-------TAGGATGCTGGGCCTATTTAAGTGATGATGAATCACATAAATAAGTTAGATTTTCCAAAAAATTAAATGTTCAGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3449843 100 - 5030052 TAGCAGTTAATTCTAAGTTATATATAGGATGCTGGGCCTATATAAGTGATGATGAGTAGCATAAATAAGTTAGGTTTTCCAAAAAATCAAATGTTCAGAA i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1512487 871 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1692197.000000 s hg38.chr4_KI270789v1_alt 189194 319 + 205944 GTATCTTCAggccaggcatggtggctcacacctgtaatcccagcactttgggaggtcgaggaggatggatcacgaggtgaggagatcaaggccatcctgactaacacagtgaaagcccatctctattaaaaacacaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgtgccactgcattccagcctgggcgagagagtgagactctgtctcaa------------a--aacaaacaaa---cagaca-aaca----aacaaa s panTro5.chr4 192974053 327 + 194502333 GTATCTTCAggccaggcatggtggctcacacctgtaatcccagcactttgggaggtcgaggcggatggatcacgaggtcaggagatcaaggccatcctgactaacacagggaaagcccatctctattaaaaacacaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgtgccactgcattccagcctgggcgagagagtgagactctgtctcaa--------aaaca--aacaaacaaa---cagaca-aacaaacgaacaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192858502 327 + 195804263 GTATCTTCAggccaggcatggtggctcacacctgtaatcccagcactttgggaggtcgaggcggatggatcacgaggtcaggagatcaaggccatcctgactaacacagggaaagcccatctctattaaaaacacaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagctgagatcgtgccactgcattccagcctgggcgagagagtgagactctgtctcaa--------aaaca--aacaaacaaa---cagaca-aacaaacgaacaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3889905 331 + 4876863 GTATCTTCAggccaggcatggtggctcacacctgtaatcccagcactttgggaggccgaggcagatggatcatgaggtcaggagatcaaggccatcctgactaacacggtgaaagcccatctctattaaaaacacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagcatggcgtgaacccgggaggcagaacttgcagtgagctgagatcgtgccactgcattccagcctgggcgagagagtgaggctctgtctcaa----aaacaaaca--aacaaacaaa---caaaca-aacaaacaaacaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112781145 335 + 115148730 GTATTTTCAggccaggtgtggtggctcactcctgtaatcccagcacttggggaggccgagtcgggtggatcacgaggtcaggagattgagaccatcctgactaacacggtgaaagcccatgtctattaaaagcacaaaaaattagccaggtgtggtggcgggtgcctgtattcccagctacttgggaggctgaggcaggagaatggtgtgaatccaggaggcagagcttgtagtgagccgagatcgcgctactgcactccagcctgggcgagagagcgagactccttctcaaaaacaaacaaaca--aacaaacaaa---caaaca-aacaaacaaacaaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189056995 325 + 190429646 GTATCTTCAggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggccggtggatcacgaggtcaggggatcgagaccatcctgactaacacggcgaaaccccgtctctactaaaaatataaaaaattagccgggcgtggc----ggcacctgcagtcccagctactcgggaggctgagacaggagaatggcgggaacccggcaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188000675 325 + 189454096 GTATCTTCAggccaggccaggtggctcacgcctgtaatcccagcactttgggaggccgaggccggtggatcacgaggtcaggggatcgagaccatcctgactaacacggcgaaaccccgtctctactaaaaatataaaaaattagccgggcgtggc----agcacctgcagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccggaaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24391082 325 - 25927173 GTATCTTCAggccaggccaggtggctcacgcctgtaatcccagcactttgggaggccgaggccggtggatcacaaggtcaggggatcgagaccatcctgactaacacggcgaaaccccgtctctactaaaaatataaaaaattagccgggcgtggc----ggcacctgcagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagctgagatcaggccactgcactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3420700 324 + 4669795 GTATCTTCAggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggccggtggatcacgaggtcaggggatcgagaccaccctgactaacacggcgaaa-cccgtctctactaaaaatataaaaaattagccaggcgtggt----ggcacctgcagtcccagctactcgggaggctgaggcgggagaatggcgggaacccggggggtggagcttgcagtgagccgagatccggccactgcactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134377742 324 + 135778131 GTATCTTCAggccaggcacggtgactcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggggatcgagaccatcctgactaacacagcgaaa-cccgtctctactaaaaatataaaaaattagccgggcgtagc----ggcacctgcagtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2844532 323 - 2847728 GTATCTTCAggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggccagtggatcacgaggtcaggggatcgagatcatcctgactaacacggtgaaa-cccgtctctactaaaaatataaaaaattagccgggcgtggc----ggcacctgcagtcccagctactcgggaggctgaggcaggagaatggcgggaacccgggggacggagcttgcagtgagctgagatccggccact-cactccagcctgggcgacagagcgagactccgtctcaa-------aaaaca--aacaaacaaa---caaaaacaaaaaacgaacaaa i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 943525 334 + 2368649 ATATCTTCAggccgggagtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggggatcgagaccatcctgactaacacggtgaaaccccatctctactaaaaatataaaaaactagccgggcgaggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcggaaacccgggaggcggagcttgcagtgagctgagatccagccactgcactccagcctgggcggcagagtgagactccatctcaa-------aaaaaaacaaaaaacaaaaacaaaaaacaaaaaacGAACAAA i colAng1.NW_012116221v1 C 0 C 0 e calJac3.chr3 189676446 0 - 190850796 C e cebCap1.NW_016107886v1 1061706 0 - 2196201 C e dasNov3.JH570353 1512487 871 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3449943 0 - 5030052 C e saiBol1.JH378165 13167073 0 - 14256875 C e otoGar3.GL873580 11285365 1551 - 11315646 I a score=23945.000000 s hg38.chr4_KI270789v1_alt 189513 5 + 205944 caaac s panTro5.chr4 192974380 5 + 194502333 caaac i panTro5.chr4 C 0 C 0 s panPan2.chr4 192858829 5 + 195804263 caaac i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3890236 5 + 4876863 caaac i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112781480 5 + 115148730 caaaG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189057320 5 + 190429646 caaaA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188001000 5 + 189454096 caaaA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24391407 5 - 25927173 caaaA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3421024 5 + 4669795 caaaA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134378066 5 + 135778131 caaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2844855 5 - 2847728 caaaA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 943859 5 + 2368649 CATAA i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1513358 5 - 2520184 cagaa i dasNov3.JH570353 I 871 C 0 e calJac3.chr3 189676446 0 - 190850796 C e cebCap1.NW_016107886v1 1061706 0 - 2196201 C e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3449943 0 - 5030052 C e saiBol1.JH378165 13167073 0 - 14256875 C e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2322035.000000 s hg38.chr4_KI270789v1_alt 189518 229 + 205944 GTATCTTCAAATGGACATTTCAAATGTTTCTTCTTTTTATAAGTTGAGAAAGTAACA-CAGA---AGCATCAGTAAA---ATGTCTTCAGGCAACAACGTAGCATCATGTTGGTATGTCACTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTC--CCAAAATT--AAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAATCCGTAATGTTTGTGGATGATT s panTro5.chr4 192974385 229 + 194502333 GTATCTTCAAATGGACATTTCAAATGTTTCTTCTTTATATAAGTTGAGAAAGTAACA-CAGA---AGCATCAGTAAA---ATGTCTTCAGGCAACATCGTAGCATCATGTTGGTATGTCACTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTC--CCAAAATT--AAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAATCCGTAATGTTTGTGGATGATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192858834 229 + 195804263 GTATCTTCAAATGGACATTTCAAATGTTTCTTCTTTATATAAGTTGAGAAAGTAACA-CAGA---AGCATCAGTAAA---ATGTCTTCAGGCAACATCGTAGCATCATGTTGGTATGTCACTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTC--CCAAAATT--AAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAATCCGTAATGTTTGTGGATGATT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3890241 229 + 4876863 GTATCTTCAAATGGACATTTCAAATGCTTCTTCTTTATATAAGTTGAGAAAGTAACA-CAGA---AGCATCAGTAAA---ATGTCTTCAGGCAACAATGTAGCATCATGTTGGTATGTCACTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTC--CCAAAATT--AAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAATCAGTAATGTTTGTGGATGATT i gorGor5.CYUI01015356v1 C 0 I 317 s nomLeu3.chr7b 112781485 206 + 115148730 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAG--------------------------AAA---ATGTCTTCAGGCAACAACGTAGCATCATGTTGGTATGTCACTTACTGGAAAGAAGACTATG---TATCTTTTAGACTCTTT--CC-AAATT--AAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAGTCAGTAATGTTTATGGATGATT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189057325 232 + 190429646 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACGCAGCATCATGTAGCTATGTTTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT---CAAAATT-TAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188001005 233 + 189454096 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACGCAGCATCATGTAGCTATGTCTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATT-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24391412 234 - 25927173 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACGCAGCATCATGTAGCTATGTCTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATTAAAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3421029 233 + 4669795 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACACAGCATCATGTAGCTATGTCTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATT-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134378071 233 + 135778131 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACGCAGCATCATGTAGCTATGTCTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATT-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2844860 233 - 2847728 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGCTGAGCAAGTAACA-CAGAAGCAGCATCAGTAAA---ATGTCTTCAGGCCACAACACAGCATCATGTAGCTATGTGTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATT-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGATAAAGTTCAAAGAGTCAGTAATGTTTGCGGATGATT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 943864 233 + 2368649 GTATCTTCAAATGGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGCAAGTAACA-CAGAAGAAGCATCAGTAAA---ATGTCTTCAGGCCACAACACAGCATCATGTAGCTGTGTCTCTTACTGGAAAGAAGATTATA---TATCTTTTAGACTCTTT--CCAAAATA-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACGGATAAAGTTCAAAGAGTCAGTAATGTTTGTGGATGATT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189676446 232 - 190850796 gtatcttcaaatggacttttcaaatgttgcttttttatataagttgagaaagtaaca-cagaaaatacatcaataaa---atgtcttcaggcaacaaggtagcctcatgtaggtatgtcacttactggAAAGAAGATTATA---TATCTTCTAGACTCTTT--CCAAAATT-AAAAAAAAA----GC----ACCTGTCAAATATAAAATACTGGTAAAGTTCAAAGAATCAGTAATGTTTGTGGATGATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13167073 233 - 14256875 GTATCTTCAAATGGACTTTTCAAATGTTTTTTCTTTACGTAAGTTGAGAAAGTAACA-CAGAAAATGCATCAGTAAA---ATGTCTTCAGGCAACAAGGTAGCATCATGTAGGTATGTCACTTACTGGAAAGAAGATTATA---TATCTTCCAGACTCTTT--CCAAAATT-AAAAAAAAA---TGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAATCAGTAATGTTTGTGGATGATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1061706 233 - 2196201 GTATCTCCAAATAGACTTTTCAAATGTTTCTTCTTTATATAAGTTGAGAAAGTAACA-CAGAAAATGCATCAATAAA---ATGTCTTCAGGCCACAAGGTAGCATCATGTAGCTATGTCACTTACTGGAAAGAAGATTATA---TATCTTCTAGACTCTTT--CCAAAATT-AAAAAAAAA---CGC----ACCTGTCAAATATGAAATACTGGTAAAGTTCAAAGAGTCAGTAATGTTTATGGATGATT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3449943 229 - 5030052 GTATCTTCAAATGGACTTTTCAAATGTTTTTTCTTTATATAAGTTGAGAAAGTAACA-CAGAAAATACATCAATAAA---ATGTCTTCAGGCAACAAGGTAGCATCATGTAGGTATGTCACTTACTGGA---AAGATTA-A---CATCTTCTAGACTCTTT--CCAAAATA-AAAAAAAAA---TGC----ACTTGTCAAATATGAAATACTGGTAAAGTTCAAATAATCAGTAATGTTTGTGGATGATT i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1513363 247 - 2520184 atacctccaaatggatgtttgttatatttctcctatgtataaattcagggattaacatcggctcacacttgggttaatgtatttctttaggcaacaagatagaatcatccagatatgttgcttaccgataatAAAATAAGAAAGTATCCATTAGACTTTTTTCCCAAAACT-AAAAATAAAACATGCAAATATCTTTCATTTATGAAATAATAG--AAATTAAAAGAAACTATAATGTTGGTTGATGATT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=7204278.000000 s hg38.chr4_KI270789v1_alt 189747 725 + 205944 AAAAATGTGAAAACTGTGACAGATTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGCGGGC-TATAGACCGGTCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAACAACTCTTTCT-----G--AAGTTTGCCAATAGCTTTCTTTTACT-GCCAATACGACTTTTCTGAAGCATTTCATTATCAGTTGATCTTTGTCTTCTTAAGTCAGTTAATGATACGAC-ACGAACAAAATATATTATCATGcaggtaaataaaaactgtcctgttggaaaacttagtgtttcctatttaaatttca---------gaaaaattcagcttt----ttttg----tggttgatattc-aatgcacaggcattagaaaaagggtctattg-tgtctgaggttttttctggttttaagtgataaagccat--ctttggcatgaaggata---cttggttctcattttcagtagaaagtggcatgcatcccagttacccaatagttatcctaaagcactgaactaaacttaagacataaaaaatgtaagtacattcttttgaacgtgattgagaattggaattttatttgtcaaaatattttacatatgcttattctggctgccatattatgatgcttactg-tgtaaaagcttttgtggtattgtatc-ttactgagatagtatagttttttgatagatgatttctatt s panTro5.chr4 192974614 726 + 194502333 AAAAATGTGAAAACTGTGACAGATTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCGGTCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAACAACTCTTTCT-----G--AAGTTTGCCAATAGCTTTCTTTTACTGGCCAATACGACTTTTCTGAAGCATTTCATTATCAGTTGATCTTTGTCTTCTTAAGTCAGTTAATGATACGAC-ACGAACAAAATATATTATCATGCAGGTAAATAAAAACTGTCCTGTTGGAAAACTTAGTGTTTCCTATTTAAATTTCA---------GAAAAATTCAGCTTT----TTTTG----TGGTTGATATTC-AATGCACAGGCATTAGAAAAAGGGTCTATTG-TGTCTGAGGTTTTTTCTGGTTTTAAGTGATAAAGCCAT--CTTTGGCATGAAGGATA---CTTGGTTCTCATTTTCAGTAGAAAGTGGCATGCATCCCAGTTACCCAATAGTTATCCTAAAGCACTGAACTAAACTTAAGACATAAAAAATGTAAGTACATTATTTTGAACATGATTGAGAATTGGAATTTTATTTGTCAAAATATTTTACATATGCTTATTCTGGCTGCCATATTATGACGCTTACTG-TGTAAAAGCTTTTGTGGTATTGTATC-TTACTGAGATAGTGTAGTTTTTTGATAGATGATTTCTATT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192859063 726 + 195804263 AAAAATGTGAAAACTGTGACAGATTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCGGTCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAACAACTCTTTCT-----G--AAGTTTGCCAATAGCTTTCTTTTACTGGCCAATACGACTTTTCTGAAGCATTTCATTATCAGTTGATCTTTGTCTTCTTAAGTCAGTTAATGATACGAC-ACGAACAAAATATATTATCATGcaggtaaataaaaactgtcctgttggaaaacttagtgtttcctatttaaatttca---------gaaaaattcagcttt----ttttg----tggttgatattc-aatgcacaggcattagaaaaagggtctattg-tgtctgaggttttttctggttttaagtgataaagccat--ctttggcatgaaggata---cttggttctcattttcagtagaaagtggcatgcatcccagttacccaatagttatcctaaagcactgaactaaacttaagacataaaaaatgtaagtacattattttgaacatgattgagaattggaattttatttgtcaaaatattttacatatgcttattctggctgccatattatgacgcttactg-tgtaaaagcttttgtggtattgtatc-ttactgagatagtatagttttttgatagatgatttctatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3890787 723 + 4876863 aaaaaTGTGAAAACTGTGACAGATTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCGGTCTTTGGGTACTTTCTCAAAGATTAA-TGAATTTTCTTAAACAAATATTTAATTTGATTATCAGAATATGAAAGAAAAAAATTTTGTCTAACAACTCTTTCT-----G--AAGTTTGCCAGTAGCTTTCTTTTACTGGCCAATACGACTTTTCTGAAGCATTTCATTATCAGTTGATCTTTGTCTTCTTAAGTCAGTTAATGATACGAT-ACGAACAAAATATATTATCATGcaggtaaataaaaactgtcctgttggaaaacttagtgtttcctatttaaatttca---------gaaaaattcagcttt----tttcg----tggttgatattc-aatgcacaggcattagaaaaagggtctattg-tgtctgagg-tttttctggttttaagtgataaagccat--cttt-gcatgaaggata---cttggttctcattttcagtagaaagtggcatgcatcccagttacacaatagttatcctaaagcactgaactaaacttaagacataaaaaatgtaagtacattcttttgaatgtgattgagagttggaattttatttgtcaaaatattttacatatgcttattctggctgccatattatgacgcttactg-tgtaaaagcttttgtgatattgtatc-ttactgagataatatagttttttgatagatgatttctatt i gorGor5.CYUI01015356v1 I 317 C 0 s nomLeu3.chr7b 112781691 723 + 115148730 AAAAATGTAAAAACTGTGACAGATTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATAAATTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAACAACTCATTCT-----G--AAGTTTGCCAATAGCTTTCTTTTACTGGCCGATATGACTTTTCTGAAGCATTTCATTATCAGTTGAGCTTTGTCTTCTTAAGTCAGTTAATGATACGAT-ACGAAcaaaatatattatcgtgcaggtaaat--aaactgtcctgttggaaaacttagtatttcctatttaaatttca---------gaaaaatttagcttt----ttttg----tagttgatattc-aatgcacagacataagaaaacaggtctattg-tgtctaaggctttttct-gttttaagtgataaagccat--ctttggcatgaaggata---ctttgttcttgttttcagtagaaagtggcatgcatcccagttacccaatagttacccttaagcactcaactaaaattaagacataaaaaatgtaggtacattcttttgaaggtgattgagaattgaaattttatttgttaaaatattttacatatgcttattctcgctgccatattatgacacttactc-tgtaaaagcttttgtggtattgtatc-ttactgagatagtatagttttttgatagatgattTTTTTT i nomLeu3.chr7b C 0 I 1043 s rheMac8.chr5 189057557 724 + 190429646 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCTTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATACGATAACAAATAAAATATATTATCATGCAGGTAAAT--AAAGTGTCCTATTGGAATACTTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCAGCTTT----TTTTG----TGGTTGATGTTC-AATGCacaggcattagaaaaaaggtctattg-tgtctaaggctttttccggttttaagtgataaagccat--ctctggcatgtaggata---ctttgttctcattttcagtagaaagtggcatgcatcccagttaaccaatagttatcctaaagcactcaactaaaattaagacataaaaaatgtaggtacattcttttgaatgtgattgagaattggaattttatttgtcaaaatattttacgtatgcttattctggctgctatattatgaagcttactg-tgtaaaagcttttgtggtattgtaactttactgggatagtatagttttttggtagttgatttctatt i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188001238 724 + 189454096 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCTTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATACGATAACAAATAAAATATATTATCATGCAGGTAAAT--AAAGTGTCCTATTGGAATACTTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCAGCTTT----TTTTG----TGGTTGATATTC-AATGCACAGGCATTAGAAAAAAGGTCTATTG-TGTCTAAGGCTTTTTCCGGTTTTAAGTGATAAAGCCAT--CTCTGGCATGTAGGATA---CTTTGTTCTCATTTTCAGTAGAAAGTGGCATGCATCCCAGTTACCCAATAGTTATCCTAAAGCACTCAACTAAAATTAGGACATAAAAAATGTAGGTACATTCTTTTGAATGTGATTGAGAATTGGAATTTTATTTGTCAAAATATTTTACGTATGCTTATTCTGGCTGCTATATTATGAAGCTTACTG-TGTAAAAGCTTTTGTGGTATTGTAACTTTACTGGGATAGTATAGTTTTTTGGTAGTTGATTTCTATT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24391646 724 - 25927173 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAATGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCTTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATACGATAACAAATaaaatatattatcatgcaggtaaat--aaagtgtcctattggaatacttagtatttcctatttaaattttg---------taaaaattcagcttt----ttttg----tggttgatattc-aatgcacaggcattagaaaaaaggtctattg-tgtctaaggctttttccggttttaagtgataaagccat--ctctggcatgtaggata---ctttgttctcattttcagtagaaagtggcatgcatcccagttacccaatagttatcctaaagcactcaactaaaattaagacataaaaaatgtaggtacattcttttgaatgtgattgagaattggaattttatttgtcaaaatattttacgtatgcttattctggctgctatattctgaagcttactg-tgtaaaagcttttgtggtattgtaactttactgggatagtatagttttttggtagttgatttctatt i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3421262 723 + 4669795 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCTTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATACGATAACAAATGAAATATATTATCATGCAGGTAAAT--AAAGTGTCCTATTGGAAAACTTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCAGC-TT----TTTTG----TGGTTGATATTC-AATGCacaggcattagaaaaaaggtctattg-tgtctaaggctttttccggttttaagtgataaagccat--ctctggcatgtaggata---ctttgttctcattttcagtggaaagtggcatgcatcccagttacccaatagttatcctaaagcactcaactaaaattaagacataaaaaatgtaggtacattcttttgaatgtgattgagaattggaattttatttgtcaaaatattttacatatgcttattctggctgctatattatgaagcttactg-tgtaaaagcttttgtggtattgtaactttactgggatagtatagttttttggtagttgatttctatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134378304 722 + 135778131 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAACATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCTTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATA-GATAACACATAAAATATATTATCATGCAGGTAAAT--AAAGTGTCCTATTGGAAAACTTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCAGC-TT----TTTTG----TGGTTGATATTC-AATGCACAGGCATTAGAAAAAAGGTCTATTG-TGTCTAAGGCTTTTTCCGGTTTTAAGTGATAAAGCCAT--CTCTGGCATGTAGCATA---CTTTGTTCTCATTTTCAGTAGAAAGTGGCATGCATCCCCGTTACCCAATAGTTATCCTAAAGCACTCAACTAAAATTAACACATAAAAAATGTAGGTACATTCTTTTGAATGTGATTGAGAATTGGAATTTTATTTGTCAAAATATTTTACATATGCTTATTTTGGCTGCTATATTATGAAGCTTACTG-TGCAAAAGCTTTTGTGGTATTGTAACTTTACTGGGATAGTATAGTTTTTTGGTAGTTGATTTCTATT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2845093 723 - 2847728 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAATAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTTGCCAATAGCTTTCCTTTACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATATGATAACAAATGAAATATATTATCATGCAGGTAAAT--AAAGTGTCCTATTGGAAAACTTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCAGC-TT----TTTTG----TGGTTGATATTC-AATGCacaggcattagagaaaaggtctattg-tgtctaaggctttttccggttttaagtgataaagccat--ctctggcatgtaggata---ctttgttctcattttcagtggaaagtggcatgcatcccagttacccaatagttatcctaaagcactcaactaaaattaagacataaaaaatgtaggtactttcttttgaatgtgattgagaattggaattttatttgtcaaaatattttacatatgcttattctggctgctatattatgaagcttactg-tgtaaaagcttttgtggtattgtaactttactgggatagtatagttttttggtagttgatttctatt i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 944097 722 + 2368649 AAAAATGTGAAAACTGTGACAGA----TTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TATAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAGTTTGATTACCAGAATATGAAAGAAAAAAATTTTGTCTAATAACTGTTTCT-----GAAAAGTTCGCCAATAGCTTTCTTTCACTGGCCGATACGGCTTTTCTGAAGCATTTCATTATCAGTTGGGTTTTGTCTTCTTAAGTCAGTTAATGATATGATAACAAAcaaaatatattatcatgcaggtaaat--aaagtgtcctgttggaaaacttagtatttcctatttaaattttg---------taaaaattcagc-tt----ttttg----tggttgatattc-aatgcacaggcgttagaaaaaaggtctattg-tgtctaaggctttttctggttttaagtgataaagccat--ctctggcatgaaggata---ctttgttctcattttcagtagaaagtggcatgcatcccagttacccaagagttatcctaaagcatccaactaaaattaagacataaaaaatgtaggtacattcttttgaatgtgattgagaactggaatttaatttgtcaaaatattttacatatgcttattctggctgccatattgtgaagcttactg-tgtaaaag-ttttgtggtgttgtaactttactgggatactatagttttttggtagttgatttctatt i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189676678 712 - 190850796 AAAAATGTAAAAACTGTGACAGGCTCTTTC----TCAGAGTAATTTGATTTCTGCAGAGTGGGC-TGTAAACCTACCCTCGGGTACTTTCTCGAAGATTAACTGAATTTTCTTAAACAAATATTTAATTGGATTACCAGAATACGAAAGAAAAAAATTTGTTCTAACAACTGTTTCT-----GGAAAGTTTTCCCACAGCTTTCCTTCACTGG-GGGGACCACGTTTCTGTAGCGTTTCATTAGCAGTTCAGCTTTGTCTTCCTAAGTCAGTTAATGACACGAT-ACCAGCAAAATATATCATCAGGCAGATAAAT--AAACTGTCCTGTTGAAAAACCTAGTGTTTCCTATTTAAATTTCG---------TCCAAATTCA-CTTT----CTTTG----TGGCTGATGTTC-AATGCACAGGCATCAGAAAACGGGTCTATTG-CGTCTAAGGCTTTTTCTGGTTTTAAGTGATCAAGCCAT--CTTTGACGTGAAGGATA---CTTTA-TCTCGTTTTCGGTAGAAAGTGGCATGCGTCCCAGTTA-CCAATAGTTATCCTAAAGC-----TCTAAGATTAAGACATAAGAAATGTAGGTACATTCTTTTGAACACGATTGAGAACTGGAATTTTGTTTGTCAAAATATTTTACATATGCTT-TTCTGGCTGCCATATTATGAAGCTTACTG-TGTAACAGCTTTTGTGCTATTGTATCTTTACTGAGATGGTGCAG-TTTTTGGTAGATGATTTCTATT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13167306 724 - 14256875 AAAAATGTAAAAGCTGTGTCAGGTTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TGTAGACCTG-CCTCGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGGTTACCAGAATATGAAAGAAAAAAGTTTGGTCTAACAACTGTTTCT-----GAAAAGTTTTCCAACAGCTTTCCTTTACTGGCCGGTACCACTTTTCTGTAGCATGCCGTTATCCATTGAGCTTTGTCTTCTTAAGTCAGTTAATGACACGAT-ACCAGCAAAATATATTATCAGGCAAATAAAT--AAACTGTCCTGTTGAAAAACCTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCA-CTTT----CTTTG----TGGTTGATATTC-AATGCACAGGCATTAGAAAACAGGTCTATTG-TGTCTAAGGCTTTTTCTGGTTTTAAGTGATAAAGCCAT--CTTTGACATGAAGGATA---CTTTGTTCTCATTTTCAGTAGAAAGTGATATGCATCCCAGTTACCCCATAGTTATCCTAAAGCACTCAACTAAGATTAACACACAAGAAATGTAGGTACATTCTTTTGAACATGATGGAGAATTGAAATTTTATTTGTCAAAATATTTTACATATGCTTATTCCGGCTGCCATATTATGAAGCTTGCTG-TGTGAAAGCTTTTGTGGTATTGTATCTTTACTGAGATGGTGCAG-TTTTTGGTAGATGATTTCTATT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1061939 713 - 2196201 AAAAATGTAAACGCTGTGACAGGTTCTTTCTCAGTCAGAGTAATTTGATTTCTGCAG-------------ACCTGCCTTTGGGTACTTTCTCAAAGATTAACTGAATTTTCTTAAACAAATATTTAATTTGATTACCAGAATATGAAAGAAAAAAATTTGGTCTAACAACTGTTTCT-----GAAAAGCTTTCCAGTAGCCTTCCTTTACTGGCCGGTACCACTTTTCTGTAGCATTTCATTACCAGTTGAGCTTTGCCTTCTCAAGGCAGTTAATGACACGAT-ACCAGCAAAATACATTATCAGGCAGATAAAT--AAACTCTCCTGTTGAAAAACCTAGTATTTCCTATTTAAATTTTG---------TAAAAATTCA-CTTT----CTTTG----TGGTTGATACTC-AATGCacaggcattagaaaacaggtcgattg-cgtctaatgctttttctggttttaagtgataaagccat--ctctgacgtgaaggata---ctttgttctcgttttcactagacagtggcatgcatcccagttacccaatagttaccctaaagcactcaactaagattaagacataagaaatgtaggtacattcttttgaacatgattgagaattggaattttagttgtcaaaatattttacatatgcttattccagctgccatattatgaggcttactg-tgtaaaagcttttgtggtattgtatctttactgagatggtgcaa-tttttggtaggcgatttctatt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3450172 722 - 5030052 AAAAATGTAAAAACTGTGACAGGTTCTCTCTCAGTCAGAGTAATTTGATTTCTGCAGAGTGGGC-TGTAGACCTGCCTTCGGGTACTTTCTCAAAGATTAACTGAATCTTCTTAAACAAATATCTAATTTGATTACCAGAATATGAAAGAAAAAAATTTGGTCTAACAACTGTTTCC-----GAAAAGTTTTCCAATAGCTTTCCTTTAATGGCCGGTATCACTTTTCTGTAGCATTTCATTATCAGTTGAGCTTTGTCTTCTTAAGTCAGTTAATGACACGAT-ACCAgcaaaatatattatcaggcagataaat--aaattgtcctgttgaaaaacctagtatttcctatttaaattttg---------taaaaattca-cttt----ctttg----tggttgatattc-catgcacaggcattagaaaacaggtctattg-catctaaggctttttct-gttttaagtgataaagccat--ctttgacatgaagggta---ctttgttctcattttcagtagaaagtggcatgcatcccagttaccca--agttatcctaaggcactcaactaagagtaagacataagaaatataggtacattcttttgaacatgattgagaattggaattttatttgtcaaaatattttacatatgcttattctggctgccatattatgaagcttactg-tgtaaaagcttttgtggtattgtatctttactgagatggtgcag-tttttggtagatgatttctatt i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1513610 694 - 2520184 AAAAAGGTGAAAG-TGTGACATATTCTTCCTC--TAAGAGTGATTCTATTTCTGCAGAGTAGACTTATAGACCTGCATT-ATGTACTTCCTCAAAACTTATTTA---TTTCATGAATAAATATTTAGTTTAATTACTAGAAAATG--AGTGATAATTTTGGTCTAATAACTTCATTTTGGGGGGACTGTTTTCCAATAGT-------------------------------AGCATCCTA----------------ATTATCTTAAGAAAAGTAACAGTATCTT-TTAtacaaaatgcatcatcaggcaggtgaat--gagttgcactgttggaaaactttgtatatcctatttaaagtttggaggtatctgagaaattcatccttttacttttgtgcatgggtgatattcaaatgcacaagcactagaagacaggcccggtactttctgaggctatttctggttctgagttataaaaccatgccatagacataaagaatgtatctttgttctcacatgcagtagcatctgacatgcagccaagccatccaggag-----ctacaggattcaacagaaggtaagatggaggagatgtagtttatatcctctggacttgatttagactttgaattccactggttaaaatgtttt---tcttcttattcaggctgctgtattatgaaagtagatgctgtaaaagcattagggattttgtgtctttattgacactatctaggtttctggtaaatgatttctatc i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=2580602.000000 s hg38.chr4_KI270789v1_alt 190472 298 + 205944 cgtggactcaaagcctcataattatattatatatgttaggaaggattttccttattttcctggtgacatgaaa-aatctatgtaagtgatttataaggagatatctgcacagagatctgtatgttc-ctttataa---att--attaatatagagatttaatttaaacattattatgacagttagccaatagtgatattttgagggaatattctatagactcatgagtttgttattctgtgacaataggttt----------tcacctttta-----aaataaaa---a-actatactcacattcccctctgagagaactctaT s panTro5.chr4 192975340 298 + 194502333 CGTGGACTCAAAGCCTCATAATTATATTATATATGTTAGGAAGGATTTTCCTTATTTTCCTGGTGACATGAAA-AATCTATGTAAGTGATTTTTAAGGAGATATCTGCACAGAGATCTGTATGTTC-CTttataa---att--attaatatagagatttaatttaaacattatTATGACAGTTAGCCAATAGTGATATTTTGAGGGAATATTCTATAGACTCATGAGTTTGTTATTCTGTGACAATAGGTTT----------TCACCTTTTA-----AAATAAAA---A-ACTATACTCACATTCCCCTCTGAGAGAACTCTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192859789 298 + 195804263 cgtggactcaaagcctcataattatattatatatgttaggaaggattttccttattttcctggtgacatgaaa-aatctatgtaagtgatttataaggagatatctgcacagagatctgtatgttc-ctttataa---att--attaatatagagatttaatttaaacattattatgacagttagccaatagtgatattttgagggaatattctatagactcatgagtttgttattctgtgacaataggttt----------tcacctttta-----aaataaaa---a-actatactcacattcccctctgagagaactctaT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3891510 297 + 4876863 cgtggactcaaagcctcataattatattatatatgttaggaagga-tttccttattttcctggtgacatgaaa-aatctatgtaagtgatttataaggagatatctgcacagagatctgtatgttc-ctttataa---att--attaatatagagatttaatttaaacattattatgacagttagccaatagtgatattttgagggaatattctatagactcatgagtttgttattctgtgacaataggttt----------tcacctttta-----aaataaaa---a-actatactcacattcccctctgagagaactctaT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189058281 292 + 190429646 cgtggactcaaagcctcataattaaattatatatgttaggaaagattttccttattttcctggtgacatgaaa-aatctatgtaagtgatt----------tatctgcacagagatctgtgtgttc-ctttataatatctc--attaatatagagatttaatttaaatgttattatgagagttaaccaatagtgatattttgagggaatattctatagactcatgacttggttattctgtgatagtaggttt----------tcccctttta-----aaataaaa---aaactacactcacattcctctctgaaagaactctaT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188001962 292 + 189454096 CGTGGACTCAAAGCCTCATAATTAAATTATATATGTTAGGAAAGATTTTCCTTATTTTCCTGGTGACATGAAA-AATCTATGTAAGTGATT----------TATCTGCACAGAGATCTGTGTGTTC-CTTTATAATATCTC--ATTAATATAGAGATTTAATTTAAATGTTATTATGAGAGTTAACCAATAGTGATATTTTGAGGGAATATTCTATAGACTCATGACTTGGTTATTCTGTGATAGTAGGTTT----------TCCCCTTTTA-----AAATAAAA---AAACTACACTCACATTCCTCTCTGAAAGAACTCTAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24392370 292 - 25927173 cgtggactcaaagcctcatcattaaattatatatgttaggaaagattttccttattttcctggtgacatgaaa-aatctatgtaagtgatt----------tatctgcacagaaatctgtgtgttc-ctttataatatctc--attaatatagagatttaatttaaatgttattatgagagttaaccaatagtgatattttgagggaatattctatagactcatgacttggttattctgtgatagtaggttt----------tcccctttta-----aaataaaa---aaactacactcacattcctctctgaaagaactctaT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3421985 300 + 4669795 cgtggactcaaagcctcataattaaattatatatgttaggaaggattttccttattttcctggtgacatgaaa-aatctatgtaagtgatttacaaggaaatatctgcacagagatctgtatgttc-ctttataagatatc--atta--atagagatttaatttaaacattattatgcgagttaaccaatagtgatattttgagggaatattctatagactcatgacttggttattctgtgacagtaggttt----------tcccctttta-----aaataaaa---aaactacactcacattcctctctgaaagaactctaT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379026 290 + 135778131 CGTGGACTCAAAGCCTC--AATTAAATTATATATGTTAGGAAGGATTTTCCTTATTTTCCTGGAGACATGAAA-AATCTATGTAAGTGATT----------TATCTGCACAGAGATCTGTGTGTTC-CTTTATAATATATC--ATTAATATAGAGATTTAATTTAAATGTTATTATGAGAGTTAACCAATAGTGATATTTTGAGGGAATATTCTATAGACTCATGACTTGGTTATTCTGTGACAGTAGGTTT----------TCCCCTTTTA-----AAATAAAA---AAACTACACTCACATTCCTCTCCGAAAGAACTTTAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2845816 300 - 2847728 cgtggactcaaagcctcataattaaattatatatgttaggaaggattttccttatcttcctggtgacatgaaa-aatctatgtaagtgatttataaggaaatatctgcacagagatctgtatgttc-ctttataagatatc--atta--atagagatttaatttaaacattattatgcgagttaaccaatagtgatattttgagggaatgttctatagactcatgacttggttattctgtgacagtaggttt----------tcccctttta-----aaataaaa---aaactacactcacattcctctctgaaagaactctaT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 944819 294 + 2368649 cgtggactcaaagcctcataaTTAAATTATATATGTTAGGAAGGATTTTTCTTATTTTCCTGGTGACATGAAA-AATCTATGTAAGTGGTT----------TATCTGCACAGAGATCTGTGTGTTC-CTTTATAAGATATCATATTCATATAGAGATTTAATTTAAACAGTATTATGAGAGTTAACCAATAGTAATATTTTGAGGGAATATTTTATAGACTCATGACTTGGTTATTCTGTGACAGTAGGTTT----------TCCCCTGTTA-----AAATAAAA---ATACTATACTCACATTTCTCTCTGAAAGAACTCTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189677390 306 - 190850796 TGTGGACTCAAAGCCTCATAATTAAATTATGTATGTTAGGAAGGATTTTCCCTATTTTCCTGGTGACATGAAA-AGTCTATGTAAGTGATTTGTAAGGAAATGTCTGCACAGAGATCTGTGCGTTC-CTTTCCAG-GTATT--ATTAATATAGAGATTTAATTTAAACATTATTATGAGAGATCAACAATAGTGATATTTTGAGGGAGTATTCTGTAGGCTCATGACTTTGTTATTCTGTGACAATAGGTTT----------TCCGCCTTTAAAATAAAAAGGAA---AAACTGTACTCACATCCCCCTCTGAGAGAACTCTGT i calJac3.chr3 C 0 I 13 s saiBol1.JH378165 13168030 298 - 14256875 TGTGGACTCAAAGCCTCATAATTAAATTATATATGTTAGGAAGGATTTTCCTTATTTTCCTGGTGACATGAAA-AGTCTATGTAAGTGATTTGTAAGGAAATGTCTGCACAG-GATCTGTGCCTTC-CTTTACAA-Gtatt--attaatatagaaatttaatttaaatattCTTATGAGAGATTGCCAATAGTGATATTTTGAGGGAGTATTCTATAGACTTATGACTTTGTTATTCTGTGACAATAGGTTT----------TCCCCTTT-------AAAAAAAA---AATCTATACTCACATTCCCCTCTGCAAGAACTCTAT i saiBol1.JH378165 C 0 I 15 s cebCap1.NW_016107886v1 1062652 305 - 2196201 tgtggactcaaagcctcataattaaattatatatgttaggaaggattttccttattttcctggtgacatgaaa-actctatgtaagtgatttgtaaggaaatgtctggacagagatctgtgcgttc-ctttacag-gtatt--attaatatagagatttaatttaaacattattgtgagagatcaccaatagtgatattttgagggagtattctatagacttacgactttgttattctgtgacaataggttt----------tccccttttaaaat-taaaaaaa---aaagtatactcacattcccctctgaaagaactctat i cebCap1.NW_016107886v1 C 0 I 35 s aotNan1.NW_018492112v1 3450894 304 - 5030052 tgtggactcaaagccttataattaaattatatatgttaggaaggattttccttattttcctggtgacatgaaa-agtctatgtaagtgatttgtaaggaaatgtctgcacagagatctgtgtattc-ctttacag-gtatt--attaatatagagatttaatttaaacattattatgaaagattgccaatagtgatattttgaaggagtattctatagacttatgactttgttattctgtgacaataggttt----------tccccttttaaaa--taaaaaaa---aaactatactcacattcccctctgaaagaactctat i aotNan1.NW_018492112v1 C 0 I 53 s dasNov3.JH570353 1514304 314 - 2520184 tgaggactcaagggctcataataatatggtatatgttaggaaaattcttacctattttcttagtgacatgaaatagcatatgtgagtgatttgtaagggaatatctacacaaaaatctatttgctctttttatga---gat--attgatatataggtttaatctaaaagttactatgagaaataatttttaaaaaaattttgaagaagtattctacaaactaacagatttgttattttgtggcaatagtgctcccacccacctccccttttt-----taaaaaaatgtaaatgattttcacttttcttggaggaagtactatgt i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=17364.000000 s hg38.chr4_KI270789v1_alt 190770 4 + 205944 Aggc s panTro5.chr4 192975638 4 + 194502333 Aggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860087 4 + 195804263 Aggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3891807 4 + 4876863 Aggc i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189058573 4 + 190429646 ATgc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188002254 4 + 189454096 ATgc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24392662 4 - 25927173 ATgc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3422285 4 + 4669795 ATgc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379316 4 + 135778131 ATgc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2846116 4 - 2847728 ATgc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 945113 4 + 2368649 ATgc i colAng1.NW_012116221v1 C 0 C 0 s dasNov3.JH570353 1514618 4 - 2520184 gtgc i dasNov3.JH570353 C 0 I 38 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1175143.000000 s hg38.chr4_KI270789v1_alt 190774 257 + 205944 cgggtgcggtggctcatgcctgtaatcccagcactttggcagcccgaggtgggcggatcataaggtcaagagatcgagaccatgctggccaacatggtgaaacactgcttctactaaaaatacaaaaatgagctgggcatggtggcaggcgcctgtagtcccagctactcgggaggcggaggcaggagaatcacttgaacctgggaggtggacggtgcagtcagccaagattgtgccactgcacttcagcctggcta s panTro5.chr4 192975642 257 + 194502333 cgggtgcggtggctcatgcctgtaatcccagcactttgggagcccgaggtgggtggatcataaggtcaagagatcgagaccatgctggccaacatggtgaaacactgcttctactaaaaatacaaaaatgagctgggcatggtggcaggcgcctgtagtcccagctactcgggaggcggaggcaggagaatcacttgaacctgggaggtggacggtgcagtcagccaagattgtgccactgcacttcagcctggcta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860091 257 + 195804263 cgggtgcggtggctcatgcctgtaatcccagcactttgggagcccgaggtgggcggatcataaggtcaagagatcgagaccatgctggccaacatggtgaaacactgcttctactaaaaatacaaaaatgagctgggcatggtggcaggcgcctgtagtcccagctactcgggaggcggaggcaggagaatcacttgaacctgggaggtggatggtgcagtcagccaagattgtgccactgcacttcagcctggcta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3891811 257 + 4876863 cgggtgcggtggcttacgcctgtaatcccagcactttgggagcccgaggtgggcggattataaggtcaagagatcgagaccatgctggccaacatggtgaaacactgcttctactaaaaatacaaaaatgagctgggcatggtggcaggcgcctgtagtcccagctactcaggaggctgagacaggagaatcacttgaacctgggaggcggacggtgcagtcagccaagattgtgccactgcactccagcctggcta i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189058577 257 + 190429646 caggtgtggaggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcataaggtccagagatcgagaccatgctggccaacgtggtgaaccaccacttctactaaaaatacaaaaattagtcaggcgtggtggtgggcacctgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacattgcagtgagctgagattgcgccactgtactccagcctggcta i rheMac8.chr5 C 0 I 86 s macFas5.chr5 188002258 257 + 189454096 caggtgtggaggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcataaggtccagagatcgagaccatgctggccaacatggtgaaccaccacttctactaaaaatacaaaaattagtcaggcgtggtggtgggcacctgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacattgcagtgagctgagattgcgccactgtactccagcctggcta i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24392666 257 - 25927173 caggtgtggaggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcataaggtccagagatcgagaccatgctggccaacatggtgaaccaccacttctactaaaaatacaaaaattagtcaggcgtggtggtgggcacctgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacattgcagtgagctgagattgcgccactgtactccagcctggcta i macNem1.NW_012013133v1 C 0 I 86 s cerAty1.NW_012001672v1 3422289 257 + 4669795 cgggtgtggtggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcataaggtccagagatcgagaccatgctggccaacatggtgaaacaccacttctactaaaaatacaaaaattagccaggcgtggtggtggacacccgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacactgcagtgagctgagatcgcgccactgtactccagcctggcta i cerAty1.NW_012001672v1 C 0 I 1028 s chlSab2.chr7 134379320 257 + 135778131 cgggtgtggaggctcacacctgtaattccagcactttgggaagccgaggtgggtggatcataaggtccagagattgagaccatgctggccaacatagtgaaacaccacttctactaaaaatacaaaaattagccaggcgtggtggtgggcacctgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacattgcagtgagctgagatcacgccactgtactccagcctggcta i chlSab2.chr7 C 0 I 81 s manLeu1.NW_012102221v1 2846120 257 - 2847728 cgggtgtggtggctcacacctgtaattccagcactttgggaggccgaggtgggtggatcataaggtccagagatcgagaccatgctggccaacatggtgaaacaccacttctactaaaaatacaaaaattagccaggtgtggtggtggacacccgtagtcccagctccctgggaggctgaagcaggagaatcacctgaacctgggaggcagacattgcagtgagctgacattgcgccactgtactccagcctggcta i manLeu1.NW_012102221v1 C 0 I 81 s colAng1.NW_012116221v1 945117 257 + 2368649 cgggtgtggtggctcacacctgtaattccagcacttcaggaggccaaagtgggtggatcataaggtccagagatcgagactatgctggccaacatggtgaaacaccacttctactaaaaatacaagaattagccaggcgtggtggtgggcaccggtagtcccagctccctgggaggctgaagcaggagaatcacttgaacctgggaggcagacattgcagtgagctgagatcgcgccactgtactccagcctggcta i colAng1.NW_012116221v1 C 0 I 38 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=46186.000000 s hg38.chr4_KI270789v1_alt 191031 125 + 205944 cagggtgagactttgaaaaaaaacaaac--aaaaaaaaaaccaaaagaaagaaagaaagtgagagagagagagag----------aaagaaagaaaggaaaggg-----aaagaaaagaaaggaaagaaaagagaaagaaag s panTro5.chr4 192975899 131 + 194502333 cagggtgagactttgaaaacaaacaaaca-aaaaaaaaaaCCAaaagaaagaaagaaagtgagagagagagagag----------aaagaaagaaaggaaagggaaagaaaagaaaagaaaggaaagaaaagagaaagaaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860348 127 + 195804263 cagggtgagactttgaaaacaaacaaac---aaaaaaaaaccaaaagaaagaaagaaagt--gagagagagagag----------aaagaaagaaaggaaagggaaagaaaagaaaagaaaggaaagaaaagagaaagaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892068 137 + 4876863 cagggtgagactttgaaaacaaacaaacagacaaaaaaaaCCAaaagaaagaaagaaagtgagagagagagagagagaaagcaataaagaaagaaaggaaaggg-----aaagaaaagaaaagaaagaaaagagaaagaaag i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 188002515 38 + 189454096 -------------------------------------------tgggaaagaaagaactctactccgtttcaaag----------aaagaa--------------------------------------------------- i macFas5.chr5 C 0 C 0 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945374 38 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=37718.000000 s hg38.chr4_KI270789v1_alt 191156 33 + 205944 aaCTCTATCTGTGCAGTTAAATGAGAGAAAGAA s panTro5.chr4 192976030 33 + 194502333 aaCTCTATCTGTGCAGTTAAATGAGAGAAAGAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860475 33 + 195804263 aaCTCTATCTGTGCAGTTAAATGAGAGAAAGAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892205 29 + 4876863 aaC----TCTGTGCAGTTAAATCAGAGAAAGAA i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 188002553 33 + 189454096 aaCTCTATCTGTGTGGTTAAATCAGAAAAAGAA i macFas5.chr5 C 0 C 0 s colAng1.NW_012116221v1 945412 33 + 2368649 aaCTCTATCTGTGCAGTTAAATCAGAAAAAGAA i colAng1.NW_012116221v1 I 38 I 10 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=5104.000000 s hg38.chr4_KI270789v1_alt 191189 7 + 205944 CACATAG s panTro5.chr4 192976063 7 + 194502333 CACATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860508 7 + 195804263 CACATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892234 7 + 4876863 CACATAG i gorGor5.CYUI01015356v1 C 0 C 0 s macFas5.chr5 188002586 7 + 189454096 TATGTAG i macFas5.chr5 C 0 I 8 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=546.000000 s hg38.chr4_KI270789v1_alt 191196 1 + 205944 T s panTro5.chr4 192976070 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860515 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892241 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 T 18 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=3959.000000 s hg38.chr4_KI270789v1_alt 191197 15 + 205944 TTAGAGGACTTTTAT s panTro5.chr4 192976071 15 + 194502333 TTAGAGGACTTTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860516 15 + 195804263 TTAGAGGACTTTTAC i panPan2.chr4 C 0 C 0 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e gorGor5.CYUI01015356v1 3892242 18 + 4876863 T e otoGar3.GL873580 11285365 1551 - 11315646 I a score=18558.000000 s hg38.chr4_KI270789v1_alt 191212 33 + 205944 AGAGAAAGAACACATAGTTTAGAGGACTTTTAT s panTro5.chr4 192976086 33 + 194502333 AGAGAAAGAACACATAGTTTAGAGGACTTTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860531 33 + 195804263 AGAGAAAGAACACATAGTTTAGAGGACTTTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892224 33 + 4876863 AGAGAAAGAACACATAGTTTAGAGGACTTTTAT i gorGor5.CYUI01015356v1 T 18 T 33 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=37530.000000 s hg38.chr4_KI270789v1_alt 191245 68 + 205944 AGAGAAAGAACACATAGTTTAGAGGACTTTTATAGAGAAAGAACACATAGTTTAGAGGACTTTTATAG s panTro5.chr4 192976119 68 + 194502333 AGAGAAAGAACACATAGTTTAGGGGACTTTTATAGAGAAAGAACACATAGTTTAGAGGACTTTTATAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860564 68 + 195804263 AGAGAAAGAACACATAGTTTAGAGGACTTTTATAGAGAAAGAACACATAGTTTAGGGGACTTTTATAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892224 68 + 4876863 AGAGAAAGAACACATAGTTTAGAGGACTTTTATAGAGAAAGAACACATAGTTTAGAGGACTTTTATAG i gorGor5.CYUI01015356v1 T 33 T 50 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=4093.000000 s hg38.chr4_KI270789v1_alt 191313 16 + 205944 AGAAAGAACACATAGG s panTro5.chr4 192976187 16 + 194502333 AGAAAGAACACATAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860632 16 + 195804263 AGAAAGAACACATAGT i panPan2.chr4 C 0 C 0 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e gorGor5.CYUI01015356v1 3892292 50 + 4876863 T e otoGar3.GL873580 11285365 1551 - 11315646 I a score=8406.000000 s hg38.chr4_KI270789v1_alt 191329 15 + 205944 TTAGAGGACTTTTAT s panTro5.chr4 192976203 15 + 194502333 TTAGAGGACTTTTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860648 15 + 195804263 TTAGAGGACTTTTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892242 15 + 4876863 TTAGAGGACTTTTAT i gorGor5.CYUI01015356v1 T 50 C 0 e calJac3.chr3 189677696 13 - 190850796 I e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e dasNov3.JH570353 1514622 38 - 2520184 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e saiBol1.JH378165 13168328 15 - 14256875 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e nomLeu3.chr7b 112782414 1043 + 115148730 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=9779.000000 s hg38.chr4_KI270789v1_alt 191344 4 + 205944 AGAG s panTro5.chr4 192976218 4 + 194502333 AGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860663 4 + 195804263 AGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892257 4 + 4876863 AGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783457 4 + 115148730 AGAG i nomLeu3.chr7b I 1043 C 0 s calJac3.chr3 189677709 4 - 190850796 AGAG i calJac3.chr3 I 13 C 0 s saiBol1.JH378165 13168343 4 - 14256875 AGAG i saiBol1.JH378165 I 15 C 0 s dasNov3.JH570353 1514660 4 - 2520184 agaa i dasNov3.JH570353 I 38 C 0 e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e canFam3.chr16 17005685 802 - 59632846 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=26026.000000 s hg38.chr4_KI270789v1_alt 191348 11 + 205944 AAAGAACACAT s panTro5.chr4 192976222 11 + 194502333 AAAGAACACAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860667 11 + 195804263 AAAGAACACAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892261 11 + 4876863 AAAGAACACAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783461 11 + 115148730 AAATAACACAT i nomLeu3.chr7b C 0 I 5 s calJac3.chr3 189677713 11 - 190850796 AAAGAACATGT i calJac3.chr3 C 0 I 5 s saiBol1.JH378165 13168347 11 - 14256875 AAAGAACACGT i saiBol1.JH378165 C 0 I 5 s canFam3.chr16 17006487 11 - 59632846 aaagaacattt i canFam3.chr16 I 802 I 5 s dasNov3.JH570353 1514664 11 - 2520184 aacaaaaACAT i dasNov3.JH570353 C 0 I 7 e cebCap1.NW_016107886v1 1062957 35 - 2196201 I e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e colAng1.NW_012116221v1 945445 10 + 2368649 I e manLeu1.NW_012102221v1 2846377 81 - 2847728 I e chlSab2.chr7 134379577 81 + 135778131 I e cerAty1.NW_012001672v1 3422546 1028 + 4669795 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=52552.000000 s hg38.chr4_KI270789v1_alt 191359 8 + 205944 AGTTTAGA s panTro5.chr4 192976233 8 + 194502333 AGTTTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860678 8 + 195804263 AGTTTAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892272 8 + 4876863 AGTTTAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783477 8 + 115148730 AGTTTAGA i nomLeu3.chr7b I 5 C 0 s cerAty1.NW_012001672v1 3423574 8 + 4669795 AGTTTGGA i cerAty1.NW_012001672v1 I 1028 C 0 s chlSab2.chr7 134379658 8 + 135778131 AGTTTGGA i chlSab2.chr7 I 81 C 0 s manLeu1.NW_012102221v1 2846458 8 - 2847728 AGTTTGGA i manLeu1.NW_012102221v1 I 81 C 0 s colAng1.NW_012116221v1 945455 8 + 2368649 AGTTTGGA i colAng1.NW_012116221v1 I 10 C 0 s calJac3.chr3 189677729 8 - 190850796 AGTTGAAA i calJac3.chr3 I 5 C 0 s saiBol1.JH378165 13168363 8 - 14256875 AGTTTAAA i saiBol1.JH378165 I 5 C 0 s cebCap1.NW_016107886v1 1062992 8 - 2196201 AGTTTAAA i cebCap1.NW_016107886v1 I 35 C 0 s canFam3.chr16 17006503 8 - 59632846 ggtttaga i canFam3.chr16 I 5 C 0 s dasNov3.JH570353 1514682 8 - 2520184 GGTTTGGA i dasNov3.JH570353 I 7 C 0 e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e macNem1.NW_012013133v1 24392923 86 - 25927173 I e macFas5.chr5 188002593 8 + 189454096 I e rheMac8.chr5 189058834 86 + 190429646 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=126701.000000 s hg38.chr4_KI270789v1_alt 191367 16 + 205944 GGACTTTTATA----GGACA s panTro5.chr4 192976241 16 + 194502333 GGACTTTTATA----GGACA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860686 16 + 195804263 GGACTTTTATA----GGACA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892280 16 + 4876863 GGACTTTTATA----GGACA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783485 16 + 115148730 GGACTTTTATA----GGACA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189058920 16 + 190429646 GGACTTTTACA----GGACA i rheMac8.chr5 I 86 C 0 s macFas5.chr5 188002601 16 + 189454096 GGACTTTTACA----GGACA i macFas5.chr5 I 8 C 0 s macNem1.NW_012013133v1 24393009 16 - 25927173 GGACTTTTACA----GGACA i macNem1.NW_012013133v1 I 86 C 0 s cerAty1.NW_012001672v1 3423582 16 + 4669795 GGACTTTTACA----GGACA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379666 16 + 135778131 GGACTTTTATA----GGACA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2846466 16 - 2847728 GGACTTTTACA----GGACA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 945463 16 + 2368649 GGACTTTTATA----GGACA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189677737 10 - 190850796 GGACTTTAAT---------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13168371 16 - 14256875 GGACTTTAATA----GGACA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1063000 16 - 2196201 GGACCTTAATA----GGACA i cebCap1.NW_016107886v1 C 0 C 0 s canFam3.chr16 17006511 16 - 59632846 gAACTCTTTGG----GGATA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1514690 19 - 2520184 -GAATTCTTTAGTTTGAATA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e aotNan1.NW_018492112v1 3451198 53 - 5030052 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=1611721.000000 s hg38.chr4_KI270789v1_alt 191383 155 + 205944 GACCCCCAAATATTCTTGCAGTGCTAGGCCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAAATAAATGTAAATCTTTAGGATAAGTTGAAG-CATGTAAATAAGTCTTGACATAGAGTAAAAGAGAGGAGTGAGATTTGT s panTro5.chr4 192976257 155 + 194502333 GACCCCCAAATATTCTTGCAGTGCTAGGCCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATCAAATAAATGTAAATCTTTGGGATAAGTTGAAG-CATATAAATAAGTCTTGACATAGAGTAAAAGAGAGGAGTGAGATTTGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860702 155 + 195804263 GACCCCCAAATATTCTTGCAGTGCTAGGCCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATCAAATAAATGTAAATCTTTAGGATAAGTTGAAG-CATATAAATAAGTCTTGACATAGAGTAAAAGAGAGGAGTGAGATTTGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892296 155 + 4876863 GACCCCCAAATATTCTTGCAGTGCTAGAACTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAAATAAATGTAAATCTTTAGGGTAAGTTGAAG-CGTATAAATAAGTCTTGACATAGAGTAAAAGAGAGGAGTGAGATTTGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783501 155 + 115148730 GATCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGCA------AAATGAAATAATTATTTGAAATCTATGAACTAACTGTAAATCTTTAGGTTAAGTTGAAG-CATATAAATAAGTCTTGATATACAGTAAAAGAGAGGAGTGAGATTTGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189058936 148 + 190429646 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188002617 148 + 189454096 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393025 148 - 25927173 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3423598 148 + 4669795 GACCCCTAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379682 148 + 135778131 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAATAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2846482 148 - 2847728 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAGACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 945479 148 + 2368649 GACCCCCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAATGAAATAATTATTTAAAATCTATGAACTAAATGTAAACCTTTAGGGCAAGTTGAAG-CATATAAGTAAGTCTTGACTTATA-------AAAGGAGTAAGATTTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189677747 155 - 190850796 GACCCTCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAGTGAAATAAGTATTTAAAATCCATGAACTGAATGTAGATCTTTAGAGCAAGTGGAAG-CATATAAATAAGACTTGACATAGAATAAAAGAGAGGAGTGAGATTTAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13168387 161 - 14256875 GAGCCTCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGATATATATGAAGTCAAATAATTATTTAAAATCCATGAACTGAATGTAGATCTTTAGGGAAAGTTGAAG-CATATAAATAAGTCTTGACGTAGAATAAAAGAGAGGAGTGGGATTTAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1063016 155 - 2196201 GACCCTCAAATATTCTTGCAGTGCTAGACGTCTTGGGAGAT--ATTAGTA------AAGTGAAATAATTATTTAAAATCCGTGAACTGAATGTAGATCTTTAGGGCAAGTTGAAG-CATATAAATAAGTCTTGACATAGAATAAAAGAGAGGAGTGAGATTTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3451251 155 - 5030052 GACCCTCAAATATTCTTGCAGTGCTAGACCTCTTGGGAGAT--ATTGGTA------AAGTGAAATAATTATTTAAAATCCATGAACTGAATGTAGATCTTTAGGGCAAGTTGAAG-CATATAAATAAGTCTTGACATAGAATAAAAGAGAGGAGTGAGATTTAT i aotNan1.NW_018492112v1 I 53 C 0 s canFam3.chr16 17006527 147 - 59632846 GACTGCAACATATTCTTGC--TGTTAGTATATGTGAG-------TTAGTAT-----AAGTGAAGTAATTATTTAAAGTCCAAGGACTTCATGTGAATCTCCAGAGCAAGTCAGAG-CATACCAATAATTCTCAACATAAAATAAA--AGAAGAGTGGGGCTTAC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1514709 149 - 2520184 GGCCCCAAAATATTATTGCAGCAGCAGAACTCCTGCAAGCTGAGTTGGTAA-----AAATGAAATAATTATTTAAAATCCATTGAGTA----------TCTAAAGCAAGCCGAAGACATACCAATATTTCTTGGCATAGAATAAAATGGAGGACTGGGACTTAT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I e otoGar3.GL873580 11285365 1551 - 11315646 I a score=175179.000000 s hg38.chr4_KI270789v1_alt 191538 20 + 205944 ATGTGAATATAAGATTCAGA s panTro5.chr4 192976412 20 + 194502333 ATGTGAATATAAGATTCAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860857 20 + 195804263 ATGTGAATATAAGATTCAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892451 20 + 4876863 ATGTGAATATAAGATTCAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783656 20 + 115148730 ATGTGAATATAGGATTCATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059084 20 + 190429646 ATGTGAATATGGGATTCCGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188002765 20 + 189454096 ATGTGAATATGGGATTCCGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393173 20 - 25927173 ATGTGAATATGGGATTCCGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3423746 20 + 4669795 ATGTGAATATAGGATTCCGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379830 20 + 135778131 ATGTGAATACGGGATTCAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2846630 20 - 2847728 ATGTGAATATAGGATTCCGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 945627 20 + 2368649 ATGTGAATATAGGATTCAGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189677902 20 - 190850796 ACGTGAATATACTATTCCGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13168548 20 - 14256875 ATGCGAATATACCATTCAGA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1063171 20 - 2196201 ATGTGAATATACTATTCAGA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3451406 20 - 5030052 ATGTAAATATACTATTCAGA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11286916 17 - 11315646 ATGTCAAAATGA---TCATA i otoGar3.GL873580 I 1551 C 0 s canFam3.chr16 17006674 20 - 59632846 ACATAAATAAAATAATCAGA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1514858 8 - 2520184 ------ATATCAGA------ i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86654274 4324 - 129401213 I a score=5624799.000000 s hg38.chr4_KI270789v1_alt 191558 437 + 205944 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTATACTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCATTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGAAAACTAGAACATTAAGTCCACATGGAGCAATATAGGAAAAACCAAATAAA------------AGAT-TT--CGAATGCCCTTTTATGTAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAATGTTTAT---TTTTGTTCCTATTTTTATGTATTACAAATAGAGGTAATATTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGACTACTGAAGAGTAACTGCCAATGGC s panTro5.chr4 192976432 437 + 194502333 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTATTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACCTGATGCCCTTGAAATGATGTGGAAAATAAAT-GGAAAACTAGAACATTTAGTCCACATGGAGCAATATAGGAAAAACCAAATAAA------------AGAT-TT--CGAATGCCCTTTTATGTAATTAATTGCTTTCAAAGA-AGCAAATTCCATATGTCAGAGAT----------ATATAAATGGATATTCAAGATAATGTTTAT---TTTTGTTCCTATTTTTATGTATTACAAATAGAGGTAAGATTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGACTACTGAAGAGTAACTGCCAGTGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192860877 437 + 195804263 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTATTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACCTGATGCCCTTGAAATGATGTGGAAAATAAAT-GGAAAACTAGAACATTTAGTCCACATGGAGCAATATAGGAAAAACCAAATAAA------------AGAT-TT--CGAATGCCCTTTTATGTAATTAATTGCTTTCAAAGA-AGCAAATTCCATATGTCAGAGAT----------ATATAAATGGATATTCAAGATAATGTTTAT---TTTTGTTCCTATTTTTATGTATTACAAATAGAGGTAAGATTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGACTACTGAAGAGTAACTGCCAGTGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892471 437 + 4876863 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTATATTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGATAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGAAAACTAGAACATTTAGTCCACATGGAGCAATATAGGAAAAACCAAAGAAA------------AGAT-TT--CGAATGCCCTTTTATGTAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAATGTTTAT---TTTTGTTCCTATTTTTATGTATTACAAATAGAGGTAAGATTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGACTACTGAAGAGTAACTGCCAATGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112783676 436 + 115148730 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTATATTCAGCTACTTAAAATGAGTAATTCTACCTGCAAAGGTAGCTAGTCTCTATAACTGAC---TTAAATGATGTACTTTTAATCAATATTTCAGTTTCACTTGATGCCCTTGAAATGATGTGGAAAGTAAAA-GGAAAACTAGAACATTTAGTCCACATGGAGCAATGTAGGAAAAACCAAATGAA------------AGAT-TT--CAAATGCCCTTTTATATAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCGGAGAT----------ATATAAATGGATATTCAAGATAATGTTTA----TTTTGTTCCTATTCTTATGTATTACAAATAGAGGTAAGATTTAAAACAACAAA-AGGAGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059104 435 + 190429646 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATGGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGGAAAACCAAAT--A------------AGAC-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGACCTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188002785 435 + 189454096 TTTTTATAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATGGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGGAAAACCAAAT--A------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGACTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393193 435 - 25927173 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATGGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATGGGGAAAACCAAAT--A------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGACTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3423766 437 + 4669795 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAGATGATGTACTTTTAATCAATATTTCAATTTCACATGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGGAAAACCAAATGAA------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGACTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134379850 435 + 135778131 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GAGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGGAAAACCAAAT--A------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGATTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2846650 435 - 2847728 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTACTTAAAATGAGTAATTCTACCCGCAAAGGTAGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAATATTTCCATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGGAAAACCAAAT--A------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAT----------ATATAAATGGATATTCAAGATAatgtttat---ttttgtttctatttttatgtattatGAATAGAGGTAAGACTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 945647 445 + 2368649 TTTTTAAAATTTTAATTTAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTCTTCAGCTATTTAAAATGAGTCATTCTACCCACAAAGGTAGCTAGTCTCTATAATGGAC---TTAAATCATGTACTTTTAATCAATATTTCAATTTCACTTGATGCCCTTGAAATGATGTGGAAAATAAAA-GGGAAACTAGAACATTTAGTCCACATGGAGCAATATAGGAAAAACCAAAT--A------------AGAT-TT--CAAATGCCCTTTTATGTCATTAATTGCTTTCAAAGA-ATCAAATTCCAAATGTCAGAGATATATAAATGGATATAAATGGATATTCAAGATAATGTTTAT---TTCTGTTTCTATTTTTATGTATTATGAATAGAGGTAAGACTTAAAACAACAAA-AGGGGTAAAATTTAAAAATTTAGAAAAATATAGAGTACTGAAGAGTAACTGCCAATGGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189677922 435 - 190850796 TTTTAAAAACTGTAATGCAGTCATCTAAATGGTCT-CCTGCACT-------GATTGTATTCAGCTACTTAAAATGAGTAATCCTACCC-CAAATGTTGCTCGTCTCTATAATTGAC---TTAAATGATGTA-TTTTAATCAGTATTTCAATTTCACTTGATGTCCTTGAAATGCTGAGGAAAATAAAA-GGAAAACTAGAACATTTCATCCACGGGGAGCAATATAGGAAAAACCAAATAAA------------AAAT-TT--CAAATGCCCTTTTATATAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAG----------ATATAAATGGATATTCAAGATACTATTTAT---TTTTGTTTCTATTTTTATGTATTACAAATAGAAGTTAGACTTTAAACAACAAA-AGGAGTAAAATTCGAAAATTTAGAAAAATATTGAGTACTGAGGAGTAACAGCCAATGAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13168568 436 - 14256875 TTTTTAAAACTGCAATGCAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTATTCAGCTACTTAAAATGAGTAATCCTACCC-CAAAGGTCGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAGTATTTCAATTTCACTTGATGTCCTTGAAATGATGAGGAAAATAAAA-GGAAAACTAGAACATTTAGTCCATGGGGAGCAATATAGGAAAAACCAAATAAA------------AAAT-TT--CAAACGCCCTTTTATATAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAG----------ATATAAATGGATATTCAAGATACTATTTAT---TTTTGTTTCTATTTTTACGTATTACAAATAGAAGTTAGATTTTAAACCACAAA-AGGAGTAAAATTTAAAAATTTAGAAAAACATCGAGTACTGAGGAGTAACTGTCAATGCG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1063191 436 - 2196201 TTTTTTAAATTGCAATGCAGTCATCTAAATGGTCT-CCTGTACT-------GACTGTATTCAGCTACTTAAAATGAGTAATCCTACCG-CAAAGGTCGCTAGTCTCTATAATTGAC---TTAAATGATGTACTTTTAATCAGTATTTCAATTTCACTTGATGTCCTTGAAATGATGAGGAAAATGAAA-GGAAAACTAGAACATTTAGTCCATGGGGAGCAATATGGGAAAAACCAAATAAA------------AAAT-TT--CAAATGCCTTTTTATATAAGTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAG----------ATATAAATGGATATTCAAGATACTATTTAT---TTTTGTTTCTATTTTTACGTATTACAAATAGAAGTTAGACTTTAAACAACAAA-AGCAGTAAAATTTAAAAATTTAGAAAAATATTGAGTACTGAGGAGTAACTGCCAATGAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3451426 436 - 5030052 TTTTTAAAATTGCAATGCAGTCATCTAAATGGTCT-CCTGTACT-------GATTGTATTCAGCTACTTAAAATGAGTAATCCTACCC-CAAAGGTCGCTAGTCTCTATAATGGAC---TTAAATGATGTACTTTTAATCAGTATTTCAATTTCACTTGATGTCCTTGAAATGATGAGGAAAATAAAA-GGAAAACTAGAACATTTAGTCCATGGGGAGCAATACAGGAAAAACCAAATAAA------------AAAT-TT--CAAATGCCCTTTTATATAATTAATTGCTTTCAAAGA-AGCAAATTCCAAATGTCAGAGAG----------ATGTAAATGGATATTCAAGATACTATTTAT---TTTTGTTTCTATTTTTATGTGTTACAAATAGAAGTTAGACTTTAAACAACGAA-AGGAGTAAAATTTAAAAATTTAGAAAAATATTGAGTACTGAGGAGTAACTGCCAATGAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11286933 440 - 11315646 CTTTTAAGATTCCAAAGTAGTTATCTAAATAGTCTGCCTGTATC-------AATTGTATCCAGTTACTTAAGATGAATAATTCCACCCCCAAAAGTAATTAGTCTCTATAATTTAC---TTAAATGATGTACTTTTAATCAAGATTTCAATTTTCCTTGATGTCCTGGAAA--------AAAATGTA---GAAAATTAGGACATTTAATCCACGTGGAGCAATATAGGAAAAACTAAATCAAATCACTAAAACTAAAT-CA--CAAATGCCCTTTTAGATAATTAAATGCTTTGAAATATAGCAAATTCCAAATGTCAGAGAT----------AATTAAATGGAGATGTAGTAAAATGTTTGC---TTTTGTTTTCATTTTAAATTATTACGTGTAGAAGTAAGATTTTAAACAAAAAA-GGGAATAAAG-TAAAAAAAATAGAAACATATAGAGTACTGAGGAGGAATTGCACATGGC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86658598 422 - 129401213 TTTTTTAAATACAAATTT-GACGTTTAAATAGTCTTCCTGTTCT-------AATTGTACTCAGCTATTTAAAATGTGCAATTCCACCA-CAAAA-----TAGTCCGTATAATTTACTTTTTAAATGACGTA-TTTTAACAAAGAATTCGATTTCACCCAAAGTCTGTATAATAATGTAGAGAACAAAA--GAACATAAGTACATTTAAAC---------CAACATAAGGAAAACAAAAAGAAAT----------AGATATT--CAGCTCTCTTTTTGTATAGTTAATTATATTAAAGGA-AGCTAATTCCAAATACCAGACAA----------AGATAAATATCGATTTGGGA-AATGTTTATAAAATTTTTTTATGTTTGT---TGTTGCATATAGAGTTAAGACATTGAATAACAAA-AGTGATGAA---TAAAATATTACAGAAAAGTAGAGAACTGAAGAATAAATGACAATGGC i mm10.chr8 I 4324 I 2004 s canFam3.chr16 17006694 434 - 59632846 -TGTTAAAATTTCAATTTTGTTATTTAAATAGTCTGCCTATACCAACTGTAAATTGTATTCACTTACTTAAAGTGTGTAATTCTACCC-AAAAGGTAATTAGTCCCTATAATTTAC---TTAAATGATGTACTTTTAATCAAGATTTCAATTTCACTTGATGTCCCTGTAAGAATGTGGAAAGCAAAATGGAAAATTCGAACATTTAACCCACATGGAGCAATACAGAAGATCCTAAATACG------------AGAC-TCAATAAATGTCTTTTTAGATAATGAATTGCTTTGGATGA-AACAAATTCCCAGTGTTAGAG------------ACATAAATGGAGATGCAGGAAAATGTTGAC---TTTTGCTTCTATTTTTAT-TATTACATATA-----AAGATTTTAAACAGCAAA-AGGAAAAAA----AATATTTCAGAAAAATAAAAAGTATTGAGGAGTAATTGCATATGGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1514866 431 - 2520184 -TTTTAGAACTCCAATTTAGTAATCTAAATAATTTGCCCATGTT-------GATCACATTCAGCTACTTAAAATGTGTAATTCTACCC-AAAAGGTAATTAGTCCCTATGCATTAC---TTAAATGATGTAATTGTAATCAGGATTTCCAATTCATTTGCTGCTCCTAAAATAATGTGGAAAATAAAATGGAAAGTTACAATATTTATTCCACCTGGAGCAATATAAGAGAATCtaaataaa------------atat-ta--tata-atccttttatataataaatttCTTTGAGTAA-AACAAATT-CAAAGGTTTGAA------------ACCTAAATGGAGGTGCAGGAAAATGCTTGT---TTTTGTT--TGTTTTTAT-TATTATATCTGGAGATATGATTATGAATAACAAAGAAGAATAAAACTAATTATTTTAGAAAACTACAGAGTCCTGAGGAGTGATTGCAAATAGC i dasNov3.JH570353 C 0 C 0 a score=601803.000000 s hg38.chr4_KI270789v1_alt 191995 57 + 205944 ATGTCTTATTAATGAGAATTCTTCCCTA-GGGCTTTTAATTTGAGGTGGAGAGAGCAG s panTro5.chr4 192976869 57 + 194502333 ATGTCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861314 57 + 195804263 ATGTCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892908 57 + 4876863 ATGTCTTATTAATGAGAATTCTTCCCTA-GTGCTTTCAATTTGAGGTGGAGAGAGCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784112 57 + 115148730 ATGTCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCCATTTGAGGTGGAGGGAGCAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059539 57 + 190429646 ATGGCTTATTAATGAGAATTCTTCCCTA-GGACTTTCAATGTGAGGTGGAGAGAGCAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003220 57 + 189454096 ATGGCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393628 57 - 25927173 ATGGCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424203 57 + 4669795 ATGGCTTATTAATGAGAATTCTTCTCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380285 58 + 135778131 ATGGCTTATTAATGAGAATTCTTCCCTAGGGGCTTTCAATGTGAGGTGGAGAGAGCAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847085 57 - 2847728 ATGGCTTGTTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGCAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946092 57 + 2368649 ATGGCTTATTAATGAGAATTCTTCCCTA-GGGCTTTCAATGTGAGGTGGAGAGAGTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678357 57 - 190850796 ATGGCTCATTAATGAGAATATTTCCCCG-GGGCTTTCCGTTTGAGGAGGAGAAAGCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169004 56 - 14256875 ATGACTCATTCATGGGAATTTCTCCCCG-GGGCTTTCCATCTGAGGTGGAGACAG-AG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1063627 56 - 2196201 ATGGCTCATTAATTGGAATTTCTCCCT--GGGCTTTCCGTTTGAGGTGGAGACAGCAG i cebCap1.NW_016107886v1 C 0 I 493 s aotNan1.NW_018492112v1 3451862 57 - 5030052 ATGGCTCATTAATGGGAATTTTTCCCCG-GGGCTTTCAATTTGAGGTGGAGAAAGCAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11287373 57 - 11315646 ATTGTTTACCGATGAGAATTAGTCCATG-GAGCTTTCAGTCTGTGCTGGGGAGAGCAG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007128 56 - 59632846 ATTGTTCATTCAGGAGTATGACTTGGTA-GGGCTTTCAATCC-AGGTGGGAAAAGCAG i canFam3.chr16 C 0 I 2 s dasNov3.JH570353 1515297 56 - 2520184 ACTGCATAGCAAGGAAAGTTATT-GGTA-GAGCTTTCAATCCTAAATGTGGAAGGTGG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86659020 2004 - 129401213 I a score=21019.000000 s hg38.chr4_KI270789v1_alt 192052 9 + 205944 ----AAGCAGCG-G s panTro5.chr4 192976926 9 + 194502333 ----GAGCAGCG-G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861371 9 + 195804263 ----GAGCAGCG-G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892965 9 + 4876863 ----AAGTAGCG-G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784169 9 + 115148730 ----GAGAAGCT-G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059596 9 + 190429646 ----GAGAAGCG-G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003277 9 + 189454096 ----GAGAAGCG-G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393685 9 - 25927173 ----GAGAAGCG-G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424260 9 + 4669795 ----GAGAAGCG-G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380343 9 + 135778131 ----GAGAAGCG-G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847142 9 - 2847728 ----GAGAAGCG-G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946149 9 + 2368649 ----GAGAAGGG-G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678414 8 - 190850796 ----GAGGAGCA-- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169060 8 - 14256875 ----GAGGAGCA-- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3451919 9 - 5030052 ----GAGGAGCGG- i aotNan1.NW_018492112v1 C 0 I 958 s otoGar3.GL873580 11287430 9 - 11315646 ----GAGAGTCG-G i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007186 6 - 59632846 ----GAGTGG---- i canFam3.chr16 I 2 C 0 s dasNov3.JH570353 1515353 9 - 2520184 GCGTGGGTG----- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e mm10.chr8 86659020 2004 - 129401213 I a score=10035.000000 s hg38.chr4_KI270789v1_alt 192061 1 + 205944 G s panTro5.chr4 192976935 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861380 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892974 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784178 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059605 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003286 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393694 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424269 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380352 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847151 1 - 2847728 G i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946158 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678422 1 - 190850796 A i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169068 1 - 14256875 G i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11287439 1 - 11315646 G i otoGar3.GL873580 C 0 I 2154 s dasNov3.JH570353 1515362 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e canFam3.chr16 17007192 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I a score=10500.000000 s hg38.chr4_KI270789v1_alt 192062 1 + 205944 C s panTro5.chr4 192976936 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861381 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892975 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784179 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059606 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003287 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393695 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424270 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380353 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847152 1 - 2847728 C i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946159 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678423 1 - 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169069 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1515363 1 - 2520184 C i dasNov3.JH570353 C 0 I 5 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e canFam3.chr16 17007192 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=448469.000000 s hg38.chr4_KI270789v1_alt 192063 87 + 205944 ACGGGGCAGCTTCTCTCTAAGGTCA----CATGCTGTGGTGCAACACTGATTTAAAGTTG-TCTGCCTCAGATCCACATCAAGATGGTTAGC s panTro5.chr4 192976937 87 + 194502333 ACGGGGCAGCTTCTCTCTAAGGTCA----CATGCTGTGGTGCAACACTGATTTAAAGTTG-TCTGCCTCAGATCCACATCAAGATGGTTAGG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861382 87 + 195804263 ACGGGGCAGCTTCTCTCTAAGGTCA----CATGCTGTGGTGCAACACTGATTTAAAGTTG-TCTGCCTCAGATCCACATCAAGATGGTTAGG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3892976 87 + 4876863 ACCGGGCAGCTTCTCTCTAAGGTCA----CATGCTGTGGTGCAACACTGATTTAAAGTTG-TCTGCCTCAGATCCACATCAAGATGGTTAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784180 87 + 115148730 ACGGGGCAGCTTCTCTCTAACATCA----CATGCTGTAGTGCAACACTGATTTAAAGTTC-TCTGCCTCAGGTCCACATCGAGATGGTTAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059607 86 + 190429646 ACAGGGCAGCTTCTGTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTTAAGTTC-TCTGTCTCAGATCTCCATCAAGATGGTTAG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003288 86 + 189454096 ACAGGGCAGCTTCTCTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTTAAGTTC-TCTGTCTCAGATCTCCATCAAGATGGTTAG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393696 86 - 25927173 ACAGGGCAGCTTCTCTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTTAAGTTC-CCTGTCTCAGATCTCCATCAAGATGGTTAG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424271 86 + 4669795 ACAGGGCAGCTTCTCTCTAACCCCA----CTTGCTGTAGAGAAACACTGATTTTAAGTTC-TCTGTCTCAGATCTCCATCAAGATGGTTAG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380354 87 + 135778131 ACAGGGCAGCTTCTCTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTTAAGTTC-TCTGTCTCAGATCTCCATCAAGATGGTTAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847153 86 - 2847728 ACAGGGCAGCTTCTCTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTTAAGTTC-TCTGTCTCAGATCTCCATCAAGATGGTTAG- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946160 87 + 2368649 ACAGGGCAGCTTCTCTCTAACCTCA----CATGCTGTAGAGAAACACTGATTTAAAGTTC-TCTGTCTCAGATCCACGTCAAGATGGTTAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678424 79 - 190850796 A--------CTTCAGTGTAGCGTCA----CATGCTG-AGGGCAACACTGGTCTAATGCTCCCCTGCCTCAGATCCACAGCGAGGTGGTCAGA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169070 60 - 14256875 ACA-CGCAGCCCCAGTGCAGCGTCA----CATGCT--------------------------CCTGTGCCGGATCCGCAGCCGGGT-GTCAGA i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 17007192 43 - 59632846 --------------CTCTGTGATCAGGGTCATGGGGTGG-----------------------------------CACAGGGGGATGATTGGC i canFam3.chr16 C 0 I 137 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=223371.000000 s hg38.chr4_KI270789v1_alt 192150 31 + 205944 TACTAGTACAGAGGAACTTTACTAGGTAGGA s panTro5.chr4 192977024 31 + 194502333 TACTAGTACAGAGGAACTTTACTAGGTAGGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861469 31 + 195804263 TACTAGTACAGAGGAACTTTACTAGGTAGGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893063 31 + 4876863 TACTAGTACAGAGGAACTTTACTAGGTAGGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784267 31 + 115148730 TACTAGTACAGAGGAACTTTACTAGGTAGGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059693 31 + 190429646 TACTAATACCGAGGAACTTTACTAGGTAGGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003374 31 + 189454096 TACTAATACCGAGGAACTTTACTAGGTAGGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393782 31 - 25927173 TACTAATACCGAGGAACTTTACTAGGTAGGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424357 31 + 4669795 TACTAATACCGAGGAACTTTACTAGGTAGGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380441 31 + 135778131 TACTAATACTGAGGAGCTTTACTAGGTAGGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847239 31 - 2847728 TACTAATACCGAGGAACTTCACTAGGTAGGA i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946247 31 + 2368649 TGCTAATACCAAGGAACTTTACTAGGTAGGA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678503 31 - 190850796 CACTAGCACAGAGGAGCTTTGCTAGGCAGGC i calJac3.chr3 C 0 I 273 s saiBol1.JH378165 13169130 31 - 14256875 CACTAGTACAGAGGAACTCTCCTAGGCAGGc i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=8281.000000 s hg38.chr4_KI270789v1_alt 192181 1 + 205944 T s panTro5.chr4 192977055 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861500 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893094 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784298 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059724 1 + 190429646 t i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003405 1 + 189454096 t i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393813 1 - 25927173 t i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424388 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380472 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847270 1 - 2847728 t i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946278 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678807 1 - 190850796 t i calJac3.chr3 I 273 C 0 s saiBol1.JH378165 13169161 1 - 14256875 t i saiBol1.JH378165 C 0 I 117 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=48341.000000 s hg38.chr4_KI270789v1_alt 192182 14 + 205944 --TTTCtttctttc-tt s panTro5.chr4 192977056 14 + 194502333 --tttctttctttc-tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861501 14 + 195804263 --tttctttctttc-tt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893095 14 + 4876863 --tttctttctttc-tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784299 14 + 115148730 --tttctttctttc-tt i nomLeu3.chr7b C 0 I 117 s rheMac8.chr5 189059725 12 + 190429646 --tttctttttccc--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003406 12 + 189454096 --tttctttttccc--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393814 12 - 25927173 --tttctttttcct--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424389 12 + 4669795 --tttctttttccc--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380473 13 + 135778131 --tttctttttccct-- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847271 12 - 2847728 --tttctttttccc--- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946279 12 + 2368649 --tttctttttccc--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678808 14 - 190850796 tctctctcgctctc--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169279 14 - 14256875 tctctctctctctc--- i saiBol1.JH378165 I 117 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=-23168.000000 s hg38.chr4_KI270789v1_alt 192196 9 + 205944 --tctttct--------------------------------------------------------------------tt s panTro5.chr4 192977070 65 + 194502333 --tctttctttctttctttctttctttctttctttctttctttctttctttcttttctttctttc------------tt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861515 73 + 195804263 --tctttct----ttctttctttctttctttctttctttctttctttcttttctttctttctttcttttctttctttct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893109 9 + 4876863 --tctttct--------------------------------------------------------------------tt i gorGor5.CYUI01015356v1 C 0 I 247 s nomLeu3.chr7b 112784430 9 + 115148730 --tctttct--------------------------------------------------------------------tt i nomLeu3.chr7b I 117 C 0 s rheMac8.chr5 189059737 7 + 190429646 --ttttttt---------------------------------------------------------------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003418 7 + 189454096 --ttttttt---------------------------------------------------------------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393826 7 - 25927173 --ttttttt---------------------------------------------------------------------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424401 7 + 4669795 --ttttttt---------------------------------------------------------------------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380486 7 + 135778131 --ttttttt---------------------------------------------------------------------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847283 7 - 2847728 --ttttttt---------------------------------------------------------------------- i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946291 7 + 2368649 --ttttttt---------------------------------------------------------------------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678822 9 - 190850796 gctctctct---------------------------------------------------------------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169293 9 - 14256875 tctttctct---------------------------------------------------------------------- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=1480913.000000 s hg38.chr4_KI270789v1_alt 192205 220 + 205944 ttttttttttagaaaaagtttccttcttgttgcccaggctagagtgcaatggtgcaatctcggctcactgcaacctcagcctcccaggttcaagcaa-ttctcctgcctcaccctccctagtagctgggattaccag---tgtgcaccaccatgcccatgtaatttttgtatttttagt--agacagggtttcggcatgttggccaggctggtctcaaactcctga s panTro5.chr4 192977135 222 + 194502333 tcttttttttagaaaaagtttccttcttgttgcccaggctagagtgcaatggtgcaatctcggctcactgcaacctcagcctcccaggttcaagcga-ttctcctgcctcaccctccctagtagctgggattaccag---tgtgcaccaccatgcccatgtaatttttgtatttttagtacagacagggtttcggcatgttggccaggctggtctcaaactcctga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861588 222 + 195804263 tcttttttttagaaaaagtttccttcttgttgcccaggctagagtgcaatggtgcaatctcggctcactgcaacctcagcctcccaggttcaagcga-ttctcctgcctcaccctccctagtagctgggattaccag---tgtgcaccaccatgcccatgtaatttttgtatttttagtacagacagggtttcggcatgttggccaggctggtctcaaactcctga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893365 222 + 4876863 ttttttttttagaaaaagtttccttcttgttgcccaggctagagtgcaatggtgcaatctcggctcactgcaacctcagcctcccaggttcaagcga-ttctcctgcctcaccctccctagtagctgggattagcag---cgtgcaccaccatgcccacgtaatttttgtatttttagtacagacggggtttcgccatgttggccaggctggtctcaaactcctga i gorGor5.CYUI01015356v1 I 247 C 0 s nomLeu3.chr7b 112784439 223 + 115148730 tttttttttttgaaaaagtttccttcttgtctcccaggttagagtgcaatggcacaatctcagctcatcacaacctctgcctcccaggttcaagcgatttctcctgcctcagcctccctagtagctgggattaccag---tgtgcatcaccatgcccaggtcatttttgtatttttagtagagacggggtttcaccatgttggccaggctggtctcaaactcctga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189059744 222 + 190429646 tctttttttgagatgaagtttcactcttgtcgcccaggctggggtgcagtggcataatctcggctcactgcaacctccgcctcccaggttcaagtga-ttctcctgcctcagactccctagtagctggaattaccag---cgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i rheMac8.chr5 C 0 I 75 s macFas5.chr5 188003425 222 + 189454096 tctttttttgagacgaagtttcactcttgtcgcccaggctggggtgcagtggcataatctcggctcactgcaacctccgcctcccaggttcaagtga-ttctcctgcctcagactccctagtagctggaattaccag---cgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24393833 222 - 25927173 tctttttttgagacgaagtttcactcttgtcgcccaggctggagtgcagtggcacaatctcggctcactgcaacctccgcctcccaggttcaagtga-ttctcctgcctcagactccctagtagctggaattaccag---cgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424408 222 + 4669795 tctttttttgagacgaagtttcactcttgtcgcccaggctggggtacagtggcacaatctcggctcactgcaacctctgcctcccaggttcaagtga-ttctcctgcctcagactccctagtagctggaattaccag---cgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380493 225 + 135778131 tctttttttgagacaaagtttcactcttgttgcccaggctgaagtgcagtggcacaatctcggctcactgcaacctccgcctcccaggttcaagtga-ttctcctgcctcagactccctagaagctggaattaccagcgtcgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847290 222 - 2847728 tctttttttgagatgaagtttcactcttgtcgcccaggctggggtacagtggcacaatctcggctcactgcaacctctgcctcccaggttcaagtga-ttctcctgcctcagactccctagtagctggaattaccag---tgtgcaccaccatgcccaggtaatgtttgtatttttagtagagatgggatttctccatgttggccaggctggtctcgaactcctga i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946298 222 + 2368649 tctttttttgagacgaagtttcactcttggcgcccaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccaggttcaggtga-ttctcctgcctcagactccctcgtagctggaattaccag---tgtgcaccaccatgcccaggtaatgtttgtatttttagtagagacgggattttgccatgttggccaggctggtctcgaactcctga i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189678831 217 - 190850796 -ttttctttcag--gaagttttgcttttagtgcccaggctggagtgcagcacctcgatctcggctcactgcaacctctgtctcctgagctgaagcag-ttctcctgtttcagcctcccaagtaactggcattacagg---cgcatgccaccacgcccag-tacgttttctatttttagtagagatggcgtttcgccatgttggccaggctgg-ctcgaactcctga i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169302 214 - 14256875 -ctctctctc------tGTTTTGCTTTTAGTgcccaggctggagtacagtgcctcggtcttggttcacagcaacctctgtctcctgagcagaagcag-ttctcctgtttcagcctcccaagtaactggcattacaga---tgcccgccaccacgcccagctaagttctgtatttttagtagagatggcgtttcaccctgttggccaggctgg-ctcgaactcctga i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=173186.000000 s hg38.chr4_KI270789v1_alt 192425 37 + 205944 cctt--gtgacccacccgccttggcctcccaa-agtgctg s panTro5.chr4 192977357 37 + 194502333 cctt--gtgacccacccgccttggcctcccaa-agtgctg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861810 37 + 195804263 cctt--gtgacccacccgccttggcctcccaa-agtgctg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893587 37 + 4876863 tctt--gtgacccaccagccttggcctcccaa-agtgctg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784662 37 + 115148730 cctt--gtgacccgcccgcctcagcctcccaa-agtgctt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188003647 38 + 189454096 cctt--gtgatcagcccaccaccgcctcccaacagtgctg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394055 38 - 25927173 cctt--gtgatcagcccaccactgcctcccaacagtgctg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424630 38 + 4669795 cctc--gtgatcagcccaccaccgcctcccaacagtgctg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380718 38 + 135778131 cctc--gtgatcagcccacaaccacctcccaacagtgcta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847512 38 - 2847728 cctc--gtgatcagcccaccaccgcctcccaacagtgctg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946520 38 + 2368649 cctc--atgatctgcccgccactgcttcccaacagtgctg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189679048 39 - 190850796 cctcaagtgatctgccaacctcagcctcccaa-agtgctg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169516 38 - 14256875 cctcaagtgatctgcccacctcagcctccc-a-agtgctg i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e rheMac8.chr5 189059966 75 + 190429646 I e otoGar3.GL873580 11287440 2154 - 11315646 I a score=121047.000000 s hg38.chr4_KI270789v1_alt 192462 29 + 205944 ggattagaggtgtaagccacggcaccagg s panTro5.chr4 192977394 29 + 194502333 ggattagaggtgtaagccacggcacccgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861847 29 + 195804263 ggattagaggtgtaagccacggcacccgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893624 29 + 4876863 ggattagaggtgtaagccacggcgcccag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784699 29 + 115148730 ggattataggcgtgcaccaccacgcccgg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188003685 29 + 189454096 ggattacaggcgtgagccaccatgcccgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394093 29 - 25927173 ggattacaggcgtgagccaccacgcccgg i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424668 29 + 4669795 ggattaaaggcgtgagccaccgcgcccgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380756 29 + 135778131 ggattacaggcatgagccaccgcgcccgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847550 29 - 2847728 ggattacaggcgtgagccaccgcgcccgg i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946558 29 + 2368649 gaattacaggcatgagccaccgtgcccgg i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189679087 20 - 190850796 gtattata-gtgtgcg--------ccCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169554 20 - 14256875 ggattata-gtgtgag--------ccCAG i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11289594 29 - 11315646 GGGTTAACAGCTTGTACCAGGGAACCTCC i otoGar3.GL873580 I 2154 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007235 137 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e rheMac8.chr5 189059966 75 + 190429646 I a score=19166.000000 s hg38.chr4_KI270789v1_alt 192491 2 + 205944 cc s panTro5.chr4 192977423 2 + 194502333 cc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861876 2 + 195804263 cc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893653 2 + 4876863 cc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784728 2 + 115148730 cc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188003714 2 + 189454096 cc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394122 2 - 25927173 cc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424697 2 + 4669795 cc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380785 2 + 135778131 cc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847579 2 - 2847728 cc i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946587 2 + 2368649 cc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189679107 2 - 190850796 CC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169574 2 - 14256875 CC i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11289623 2 - 11315646 CC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007372 2 - 59632846 CT i canFam3.chr16 I 137 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I e rheMac8.chr5 189059966 75 + 190429646 I a score=31951.000000 s hg38.chr4_KI270789v1_alt 192493 6 + 205944 TACTAG s panTro5.chr4 192977425 6 + 194502333 TACTAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861878 6 + 195804263 TACTAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893655 6 + 4876863 TGCTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784730 6 + 115148730 TACTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060041 6 + 190429646 TACTAG i rheMac8.chr5 I 75 C 0 s macFas5.chr5 188003716 6 + 189454096 TACTAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394124 6 - 25927173 TACTAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424699 6 + 4669795 TACTAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380787 6 + 135778131 TACTAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847581 6 - 2847728 TACTAG i manLeu1.NW_012102221v1 C 0 C 0 s colAng1.NW_012116221v1 946589 6 + 2368649 TACTAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189679109 6 - 190850796 TGCTCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169576 6 - 14256875 TGCTCA i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11289625 2 - 11315646 TG---- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007374 6 - 59632846 GATTAA i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1063683 493 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3451928 958 - 5030052 I a score=1048389.000000 s hg38.chr4_KI270789v1_alt 192499 124 + 205944 G-TAGGATTTTCTTAGCC-ATGAT-ATGAAGCATC-TTTCCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GCAGC--TAGTAGCCCCCGCTTGCTGCCA----AG s panTro5.chr4 192977431 124 + 194502333 G-TAGGATTTTCTTAGCC-ATGAT-ATGAAGCATC-TTTCCCCTGCTTCCTGGTCACTT-GCTT-CTGTAAGCACAAGG-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GCAGC--TAGTAGCCCCCGCTTGCTGCCA----AG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192861884 124 + 195804263 G-TAGGATTTTCTTAGCC-ATGAT-ATGAAGCATC-TTTCCCCTGCTTCTTGGTCACTT-GCTT-CTGTAAGCACAAGG-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GCAGC--TAGTAGCCCCCGCTTGCTGCCA----AG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893661 124 + 4876863 G-TAGGATTTTCTTAGCC-ATGAT-ATGAAGCATC-TTTCCCCTGCTTCCTGGTCACAT-GTTT-CTGTAAGCACAAGT-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GCAGC--TAGTAGCCCCCGCTTGCTGCCA----AG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784736 124 + 115148730 G-TAGGATTTTCTTAGCC-ATGAT-AGGAAGCATC-TTTCCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GCAGC--TAGTAGCCCCCGCTTGCTGCCA----AG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060047 127 + 190429646 GAAAGGATCTTCTCAGCC-ATGAT-ATGAAGCATCTTTTTCCCTGCTTCCT-GTCACAT-GCTTCCTGTAAGCACTAGGCCCGCTGACT-----------------------------TTTCTCC-AAGGTGGTGGCCTTAGTAGCCCCTGCTTGCTGCCA------ i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003722 121 + 189454096 G-CAGGATCTTCTCAGCC-ATGAT-ATGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACTAGG-CCGCTGACT-----------------------------TTTCTCC-AAGGT-GTGGC--TAGTAGCCCCTGCTTGCTGCCA------ i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394130 121 - 25927173 G-CAGGATCTTCTCAACC-ATGAT-ATGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCACTGACT-----------------------------TTTCTCC-AAGGT-GTGGC--TAGTAGCCCCTGCTTGCTGCCA------ i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424705 121 + 4669795 G-CAGGATCTTCTCAGCC-ATGAT-ATGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCGCTGACC-----------------------------TTTCTCC-AAGGT-GTGGC--TAGTAGCCCCCGCTTGCTGCCA------ i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380793 122 + 135778131 G-CAGGATCTTCTTAGCC-ATGAT-ACGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCGCTGACC-----------------------------TTTCTCCAAAGGT-GTGGC--TAGTAGCCCCCGCTTGCTGCCA------ i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012102221v1 2847587 123 - 2847728 G-CAGGATCTTCTCAGCC-ATGAT-ATGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCGCTGACC-----------------------------TTTCTCC-AAGGT-GTGGC--TAGTAGCCCCCGCTTGCTGCCAAG---- i manLeu1.NW_012102221v1 C 0 N 0 s colAng1.NW_012116221v1 946595 124 + 2368649 G-CAGGATCTTCTTAGCC-ATGAT-ATGAAGCATC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CCTCTGACC-----------------------------TTTCTCCAAAGGT-GTGGT--TAGTAGCCCCTGCTTGCTGCCA--AG-- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189679115 130 - 190850796 G-TAGGATTTTCTTAGCC-ATGATCATGACACGCC-TTTTCCCTGCTTCCTGGTCAGAT-GCTT-CTGTAAGCACAAGG-CACCTGACCTTTCTCCAAAGGTGCACCTCCCTCTGACCTTTCTCC-----T-AGGCC--ACGCA----------------------- i calJac3.chr3 C 0 I 29 s saiBol1.JH378165 13169582 149 - 14256875 G-TAGGATTTTCTTAGCC-GTGATCATGAAGCACC-TTTTCCCTGCTACCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CATCTGACCTTTCTCCAAAGGTGCACCTACCTCTGACATTTCTCC-----T-AGGGC--ACGTAGCCCCCGCTTGCTGCCA----GG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1064176 119 - 2196201 G-TAGGAGTTTCTTAGCT-ATGATCATGAAACA-C-TTTTCCCTGCTTCCTGGTCATAC-GCTC-CTGTAAGCACAAGG-CATCTGACC-----------------------------TTTCTCC-----T-AGGGC--ACATAGCCCCTGCTTGCTACCA----GG i cebCap1.NW_016107886v1 I 493 C 0 s aotNan1.NW_018492112v1 3452886 120 - 5030052 G-TAGGATTTTCTTAGCC-ATGATCATGAAACACC-TTTTCCCTGCTTCCTGGTCACAT-GCTT-CTGTAAGCACAAGG-CATCTGACC-----------------------------TTTCTCC-----T-AGGGC--ATGCAGCCCCCGCTTGCTGCTG----AG i aotNan1.NW_018492112v1 I 958 C 0 s otoGar3.GL873580 11289627 125 - 11315646 G-TAGGACTTTCTTGGGTGATGATCATGAGTAA---CTTTACAGGCTTCTTGGCCACGTGGTTT-TTGTAAGTGCACGG-CCCCTGGAC-----------------------------TCTCCCCAGAGGC-ATGGC--TAGCAGCCCCTGCTTGCTTCTG----AG i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007380 122 - 59632846 G-CAGTACTTTTTTAGATGATGACCACGGAGTA---GTTTATCTGCTTCTTGGCCACAG-CTTT-TTGCATGTGAAAGG-CCTCCTAAC-----------------------------TTCCT--AAATGT-GTAGC--TAGTACCCACTGCTTGCTTCTA----AG i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I a score=2121.000000 s hg38.chr4_KI270789v1_alt 192623 2 + 205944 -CG s panTro5.chr4 192977555 2 + 194502333 -CG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862008 2 + 195804263 -CG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893785 2 + 4876863 -CG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784860 2 + 115148730 -CA i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 946719 2 + 2368649 -CA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13169731 2 - 14256875 -CA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1064295 2 - 2196201 -CA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3453006 2 - 5030052 -CA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11289752 2 - 11315646 -CA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007502 2 - 59632846 CC- i canFam3.chr16 C 0 C 0 e calJac3.chr3 189679245 29 - 190850796 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e chlSab2.chr7 134380915 0 + 135778131 C e cerAty1.NW_012001672v1 3424826 0 + 4669795 C e macNem1.NW_012013133v1 24394251 0 - 25927173 C e macFas5.chr5 188003843 0 + 189454096 C e rheMac8.chr5 189060174 0 + 190429646 C a score=787826.000000 s hg38.chr4_KI270789v1_alt 192625 90 + 205944 AGTCCACAGGCTCTATTTGACGTCCAGTTAGATCTGATC----TT----TGAAATAAAATAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA s panTro5.chr4 192977557 90 + 194502333 AGTCCACAGGCTCTATTTGACGTCCAGTTAGATCTGATC----TT----TGAGATAAAATAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862010 90 + 195804263 AGTCCACAGGCTCTATTTGACGTCCAGTTAGATCTGATC----TT----TGAGATAAAATAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893787 90 + 4876863 AGTCCACAGGCTCTATTTGACATCCAGTTAGATCTGATC----TT----TGAGATAAAATAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784862 90 + 115148730 AGTCCACAGGCTCTATTTGACTTCCAGTTAGATCTGATC----TT----TGAGATAAAATAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060174 90 + 190429646 AGTCCACGGGCTCTATTTGACTTCCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGCGATTGGAAATCAGTAAAAATATCAACTAGA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003843 90 + 189454096 AGTCCACGGGCTCTATTTGACTTCCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGCGATTGGAAATCAGTAAAAATATCAACTAGA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394251 90 - 25927173 AGTCCACGGGCTCTATTTGACTTCCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGCGATTGGAAATCAGTAAAAATATCAACTAGA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424826 90 + 4669795 AGTCCACGGGCTCTCTTTGACTTCCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGCGATTGGAAATCAGTAAAAATATCAACTAGA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134380915 90 + 135778131 AGTCCATGGGCTCTATTTGACTTCCAGTTAGATCTAATC----GT----TGAGATTAAGTAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 4837 90 + 1527111 AGTCCACGGGCTCTGTTTGACTTCCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGGGATTGGAAATTAGTAAAAATATCAACTAGA i manLeu1.NW_012107108v1 N 0 C 0 s colAng1.NW_012116221v1 946721 90 + 2368649 AGTTCACGGGCTCTATTTGACTTTCAGTTAGATCTGACC----GT----TGAGATTAAGTAAGTAAGCTATTGGAAATCAGTAAAAATATCAACTAGA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13169733 89 - 14256875 AGCCCACCAGCTCCATTTTACTTCCATTTAGATCATAT-----TT----TGGGATAAAATAAGCAAGCTATTGGAAATAAGTAAACACATCAACTAGA i saiBol1.JH378165 C 0 I 62 s cebCap1.NW_016107886v1 1064297 90 - 2196201 AGCCCACCGGCTCCATTTAACTTCCATTTAGATCAGATC----TT----TAGGATAAAATAAGCAAGCTATTGGAAATAAGTAAAAATATCAACTAGA i cebCap1.NW_016107886v1 C 0 I 192 s aotNan1.NW_018492112v1 3453008 90 - 5030052 AGCCCACCGGCTCCATTTAACATCCATTTAGATCAGATC----TT----TGGGATAAAATAAGATAGCTATTGCAAATAAGTAAAAATATCAACTAGA i aotNan1.NW_018492112v1 C 0 I 209 s otoGar3.GL873580 11289754 79 - 11315646 CATCTACTGCTCTTGCTCAATTGTGGATTAAATCTGATCTGTTTT----TGAGAACAAATAAGTAA---------------TGAAAATACTGACTAAA i otoGar3.GL873580 C 0 I 42 s canFam3.chr16 17007504 94 - 59632846 AGTCTATGTCCTCTAGAAATTTACCAATTAAATCTTATC----TTTCTCTGGGATCAAGGAAGTGATCTGTAGGTAATAAATAAAAATACTGACTAGA i canFam3.chr16 C 0 C 0 e calJac3.chr3 189679245 29 - 190850796 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I a score=10500.000000 s hg38.chr4_KI270789v1_alt 192715 1 + 205944 G s panTro5.chr4 192977647 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862100 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893877 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784952 1 + 115148730 g i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060264 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188003933 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394341 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3424916 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381005 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 4927 1 + 1527111 G i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 946811 1 + 2368649 G i colAng1.NW_012116221v1 C 0 I 196 s calJac3.chr3 189679274 1 - 190850796 g i calJac3.chr3 I 29 C 0 s saiBol1.JH378165 13169884 1 - 14256875 g i saiBol1.JH378165 I 62 C 0 s canFam3.chr16 17007598 1 - 59632846 G i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1064387 192 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=99502.000000 s hg38.chr4_KI270789v1_alt 192716 18 + 205944 Tctgggcgcagtggctca s panTro5.chr4 192977648 18 + 194502333 Tccgggcgcagtggctca i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862101 18 + 195804263 Tcctggcgcagtggctca i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893878 18 + 4876863 Tccgggcgcagtggctca i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784953 18 + 115148730 gccaggcgcagtggccca i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060265 18 + 190429646 TCTGGACACAGTGGCTCA i rheMac8.chr5 C 0 I 162 s macFas5.chr5 188003934 18 + 189454096 GCTGGACACAGTGGCTCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394342 18 - 25927173 GCTGGACACAGTGGCTCA i macNem1.NW_012013133v1 C 0 I 162 s cerAty1.NW_012001672v1 3424917 18 + 4669795 GCCGGACACAGTGGCTCA i cerAty1.NW_012001672v1 C 0 I 162 s chlSab2.chr7 134381006 18 + 135778131 GCTGGACACAGTGGCTCA i chlSab2.chr7 C 0 I 158 s manLeu1.NW_012107108v1 4928 18 + 1527111 GCCGGACACAGTGGCTCA i manLeu1.NW_012107108v1 C 0 I 162 s calJac3.chr3 189679275 18 - 190850796 gctgggcatggtggctca i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169885 18 - 14256875 gctgggcatgatggctca i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1064387 192 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007599 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=12967.000000 s hg38.chr4_KI270789v1_alt 192734 8 + 205944 tgcctgta s panTro5.chr4 192977666 8 + 194502333 cacctgta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862119 8 + 195804263 cacctgta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893896 8 + 4876863 cgcctgta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784971 8 + 115148730 tgcctgta i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188003952 8 + 189454096 CGtatgta i macFas5.chr5 C 0 I 76 s calJac3.chr3 189679293 8 - 190850796 ctcctgga i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169903 8 - 14256875 tgcctgta i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1064387 192 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007599 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=70732.000000 s hg38.chr4_KI270789v1_alt 192742 66 + 205944 atcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggct s panTro5.chr4 192977674 66 + 194502333 atcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggct i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862127 66 + 195804263 atcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggct i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893904 66 + 4876863 atcccagcacttcgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctggct i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112784979 66 + 115148730 atcccagcactttgggaggctgaggcgggcggatcacaaggtcaggagatcgagaccatcctggct i nomLeu3.chr7b C 0 I 220 s calJac3.chr3 189679301 50 - 190850796 atccta----------aggccaaggaaca-----tctga-gtcaggagttcgacaccagcctgacc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169911 61 - 14256875 atcccagcactttaggaggccaaggaaaa-----tttgaggtcaggagttcgacaccagcctgacc i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 17007599 9 - 59632846 ----------------------------------------AACAGGTGG----------------- i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1064387 192 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=34892.000000 s hg38.chr4_KI270789v1_alt 192808 48 + 205944 aacatggtgaaa-cctgtctctactaaaaatacaaaaaaaatagccagg s panTro5.chr4 192977740 48 + 194502333 aacgtggtgaaa-cctgtctctactaaaaatacaaaaaaaatagccagg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862193 47 + 195804263 aacgtggtgaaa-cctgtctctactaaaaatac-aaaaaaatagccagg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3893970 48 + 4876863 aacacggtgaaaccccgtctctactaaaaatac-aaaaaaatagccagg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785265 46 + 115148730 aacatggtgaaaccccatctctatcaaa---acacaaaaattagctggg i nomLeu3.chr7b I 220 C 0 s calJac3.chr3 189679351 35 - 190850796 aacatggtgaaaccctgtctctactaaa-atacaac------------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13169972 34 - 14256875 aacatggtgaaa-cctgtctctactaaa-atacaac------------- i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 17007608 9 - 59632846 ----------------------------------------ATAGCCAGG i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1064387 192 - 2196201 I e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=46648.000000 s hg38.chr4_KI270789v1_alt 192856 24 + 205944 catggtggtgggcgcctgtagtcc s panTro5.chr4 192977788 24 + 194502333 cgtggtggcgggcgcctgtagtcc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862240 24 + 195804263 cgtggtggcgggcgcctgtagtcc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894018 24 + 4876863 cgtggtgccgggcgcctgtagtcc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785311 24 + 115148730 cgtggtggcgggcgcctgtagtcc i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189679386 21 - 190850796 tgtggtg---ggtgcctgtaatct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13170006 24 - 14256875 cgtggtggcaggtgcctataatct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1064579 24 - 2196201 catggtggcaggtgcctataatct i cebCap1.NW_016107886v1 I 192 C 0 e dasNov3.JH570353 1515364 5 - 2520184 I e canFam3.chr16 17007617 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453098 209 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=310001.000000 s hg38.chr4_KI270789v1_alt 192880 131 + 205944 cagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccaagattgcaccactgcactccggcctgggagacagagtgagactccgtcag--aaaaaaaaaaaaaaa s panTro5.chr4 192977812 133 + 194502333 cagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccaagattgcaccactgcactccggcctgggagacagagcgagactccgtcagaaaaaaaaaaaaaaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862264 127 + 195804263 cagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccaagattgtaccactgcactccggcctgggagacagagcgagactccgtcaa------gaaaaaaaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894042 130 + 4876863 caggtactc-ggaggctgaggcaggagaatggcgggaacccgggaggtggagcttgcagtgagccaagattgcgccactgcactccagcctgggagacagagctagactccgtctc--aaaaaaaaaaaaaaa i gorGor5.CYUI01015356v1 C 0 I 397 s nomLeu3.chr7b 112785335 131 + 115148730 cagctccacaggaggctgaggcagaagaatctcttgaacttgggagacagagattacagtgagccgagatcacgccactgcactccagcctgggtgacagagcgagactgtttcaa--aaaaaaaaaaaaaag i nomLeu3.chr7b C 0 I 3 s calJac3.chr3 189679407 131 - 190850796 cagctacttgggaggctgaggcaggagaagcacttgaacctaggaagtggagattgcagtgaaccaaaatcaaatcactgcactccagcttgggtgacagagcaagactctgtctc--aaaaaaaaaagcaaa i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13170030 131 - 14256875 cagctactcaggaggctgagacaggagaatcccttgaacctgggaagtggagattgcagtgagccaaaatcacgtcactgcagtccagcctgggtgacagagcaagactctgtctc--aaaaaaaaaaaaaaa i saiBol1.JH378165 C 0 I 36 s cebCap1.NW_016107886v1 1064603 131 - 2196201 cagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgaaatcacgtcactgcactccagcctgggtgacagagcaagactctgtccc--cccacccaaaagaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3453307 131 - 5030052 cagctactcgggaggctgaggcaggagaatcacttgaacctgggaagtggagattgcagtgagtcaaaatcatgtcactgcactccagcctgggtgacagagcaagactctgtctc--aaaaaaaaaaaaaaa i aotNan1.NW_018492112v1 I 209 I 19 s canFam3.chr16 17007617 33 - 59632846 --------------------------------------------------------------------------------------------------AAGGCAAGAGTTTGCCTG--GAAGGAATAGAAGAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11289833 42 - 11315646 I a score=558590.000000 s hg38.chr4_KI270789v1_alt 193011 170 + 205944 aaagaaaagaaagaaAACATAAAAGTAGTAAATATCCCTAAAACTTTAATTATACTTTGAATATGAATATTTGGGCATAGTTTTTTAAAAACTGCAAATCTGTCCAA-GTAAAAG-ATTGTTTTTCTGGGTGATTTAGGGATAATTACCTTTTTTA-AA----ATCATGGTCTGTTT s panTro5.chr4 192977945 169 + 194502333 aaagaaaagaaaGAAAACATAAAAGTAGTAAATATCCCTAAAACTTTAATTATACTTTGAATATGAATATTTGGGCATAGTTTTTTAAAAACTGCAAATCTGTCCAA--TAAAAG-ATTGTTTTTCTGGGTGATTTAGGGATATTTACCTTTTTTA-AA----ATCATGGTCTGTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862391 169 + 195804263 aaaaaaaagaaagaaaaCATAAAAGTAGTAAATATCCCTAAAACTTTAATTATACTTTGAATATGAATATTTGGGCATAGTTTTTTAAAAACTGCAAATCTGTCCAA--TAAAAG-ATTGTTTTTCTGGGTGATTTAGGGATATTTACCTTTTTTA-AA----ATCATGGTCTGTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894569 169 + 4876863 gaaagaaaGAAAGAAAACATAAAAGTAGTAAATATCCCTAAAACTTTAATTATACTTTGAATATGAATA-TTGGGTATAGCTTTTTAAAAACTGCAAATCTGTCCAA-GTAAAAG-GTTGTTTTTCTGGGTGATTTAGGGATAATTACCTTTTTTA-AA----ATCATAGTCTGTTT i gorGor5.CYUI01015356v1 I 397 C 0 s nomLeu3.chr7b 112785469 170 + 115148730 gaaagaaaGAAAGAAAGAATAAAAGTAGTAAATATCCCTAAAACTGTAATTATACTTTGACTATGAATATTTGGGTATAGTTTTTTAAAAACTGTAAGTCTGTCCAA-GTAAAAG-GTTGTTTTTCTGGGTGATTTGGGGATAATTACCTTTTTTA-AA----ATCATAGTCTGTTT i nomLeu3.chr7b I 3 C 0 s calJac3.chr3 189679539 171 - 190850796 agaaaaaagaaagaaaACATAAAAGTAGTAAATATCCCTAAAACTTTAATTATACTTTGAATATGAATATTTGGGTATAGTTTTTAAAAAACTATAAATCTGCCCAA-GTAAAAG-GATGTTTTTCTGGGTGATTTTGGGATAAGTGCCTTTTATATAA----ATCATCATCTATTT i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13170197 168 - 14256875 aaagaaaagaaagaaaaCATAAAAGTAGTAAATATCCCTAAAACTTTAACTATACTTTGAATATGAATATTTGGGTATAGATTTTTAAAAACTATAAATCTGTCCAA-GTAAAAG-CATGTTTTTTTGGATGATTTTGGGATAATTGCCTTTTTAATAA-------ATCGTCTATTT i saiBol1.JH378165 I 36 C 0 s cebCap1.NW_016107886v1 1064734 170 - 2196201 gaaagaaagaaagaaaaCATAAAAGTAGTAAATATCCCTAAAACTTTAACTATGCTTTGAATATGAATATTTGGGTATAGTTTTTTAAAAACTATAAATCTGTCCAA-GTAAAAG-GATGTTTTTCTGGGTGA-TTTGGCATAATTGCCTTTTTTATAA----ATCACCATCTATTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3453457 171 - 5030052 gaaagaaagaaagaaaATGTAAAAGTAGTAAATATCCCTAAAACTTTAACTATACTTTGAATATGAATATTTGGGTATAGTTTTTTAAAAACTATAAATCTGTTCAA-GTAAAAG-GATGTTTTTCTGGGTGATTTTGGGATAATTGCCTTTTTTATAA----ATCATCGTCTATTT i aotNan1.NW_018492112v1 I 19 C 0 s otoGar3.GL873580 11289875 169 - 11315646 AAAGAAATAGAAGGAAACATGAAAGTAGCAAGTATCCCCAGGAAC-TAATTAGACTTTGAATATGGATATTCAGGTGTATTTTTAAAAAAAACTGTAATTTGCCAAA-ATAAAGG-GATATCTTTCTGGGTGACTTTGGGGTAATTATCTTTTTAT-AA----AACCCAAAGTGTTT i otoGar3.GL873580 I 42 C 0 s canFam3.chr16 17007650 150 - 59632846 ---------AAAGACA---------TATTGAGAATCTCTAAAAAGTTAAA-ACACTTTGAATGTGAATAT-----AACTACTTATTTAAAACTG--ACTTTGTCTAAAATAAAAGAGATGCTTTTCTGTGTGACTCTGAGAATATTACCTTTTTTA-AAATATATTAAAGTCTGTTA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1515364 5 - 2520184 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I a score=359601.000000 s hg38.chr4_KI270789v1_alt 193181 88 + 205944 TATGTGTTTCCAAGAGCATGCACTTTGGTAATTAAATGTGGTAGTAGGGATGTTTGAATGGAAACCAGAAAGATATTTTCATAATTAA s panTro5.chr4 192978114 88 + 194502333 TATGTGTTTCCAAGAGCATGCACTTTGGTAATTAAATGTGGTAGTAGGGATGTTTGAATGGAAACCAGAAAGATATTTTCATAATTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862560 88 + 195804263 TATGTGTTTCCAAGAGCATGCACTTTGGTAATTAAATGTGGTAGTAGGGATGTTTGAATGGAAACCAGAAAGATATTTTCATAATTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894738 88 + 4876863 TGTATGTTTCCAAGAGCATGCACTTTGGTAATTAAATGTGGTAGTAGGGATGCTTGAATGGAAACCAGAAAGATATTTTCATAATTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785639 88 + 115148730 TATGTGTTCCCAAGAACATGCACTTTGGTAATTAAATGTAGTAGTAGAGATGTTTGAATGGAAACCAGAAAGATATTttcataattaa i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189679710 88 - 190850796 TATATCTTTCTAAGAACATGCCCTTTGGTAATTAAATGTAGTAGTAGGGATATTGTAATGGAAACCAGAAAGATATTTTCACAATTAA i calJac3.chr3 C 0 I 4390 s saiBol1.JH378165 13170365 87 - 14256875 TATATCTTTCTAAGAACATGCACTTTGGTAATTAAA-GTAGTAGTAGGGATATTGTAATGGAAACCAGAAAGATATTTTCACAATTAA i saiBol1.JH378165 C 0 I 3369 s cebCap1.NW_016107886v1 1064904 88 - 2196201 TATATCTTTCTAAGAACATGCACTTTGGTAATTAAATGTAGTAGTAGGGATATTTTAATGGAGACCAGAAAGGTATTTTCACAATTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3453628 88 - 5030052 TATATCTTTCTAAGAACATGCACTTTGGTAATTAAATATAGTAGCAGGGATATTGTAATGGAAACCAGAAAGATATTTTCACAATTAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11290044 86 - 11315646 TTTATATTCCCAAGAACAT--ATTTTGATAATTGAATGTAGTAGTAGGTCTATATGAACGGAAAACAGAATGATATTTTCACAATTAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17007800 78 - 59632846 CATGTGTTCCCAAGAACATGTACTTTGGTAATTACATGTAGTAGTAGGGCTATCGGAATGGGAA--------ATACTTTCACAACT-- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1515369 82 - 2520184 TATGTTTTCCCACGAATGTGTAGCTTGGGAATTAAATGGAACGGTA------TTTGGGTGGAAAATCGAAAAACCGATTCACTGataa i dasNov3.JH570353 I 5 C 0 e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I a score=3276.000000 s hg38.chr4_KI270789v1_alt 193269 1 + 205944 T s panTro5.chr4 192978202 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862648 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894826 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785727 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s cebCap1.NW_016107886v1 1064992 1 - 2196201 T i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3453716 1 - 5030052 T i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11290130 1 - 11315646 T i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1515451 1 - 2520184 t i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189679798 4390 - 190850796 I e canFam3.chr16 17007878 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e saiBol1.JH378165 13170452 3369 - 14256875 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I a score=3785.000000 s hg38.chr4_KI270789v1_alt 193270 1 + 205944 a s panTro5.chr4 192978203 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862649 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894827 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785728 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189684188 1 - 190850796 a i calJac3.chr3 I 4390 C 0 s saiBol1.JH378165 13173821 1 - 14256875 a i saiBol1.JH378165 I 3369 C 0 s cebCap1.NW_016107886v1 1064993 1 - 2196201 A i cebCap1.NW_016107886v1 C 0 I 3433 s aotNan1.NW_018492112v1 3453717 1 - 5030052 A i aotNan1.NW_018492112v1 C 0 I 3989 s otoGar3.GL873580 11290131 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1515452 1 - 2520184 a i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17007878 0 - 59632846 C e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I a score=10342.000000 s hg38.chr4_KI270789v1_alt 193271 3 + 205944 att s panTro5.chr4 192978204 3 + 194502333 att i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862650 3 + 195804263 att i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894828 3 + 4876863 att i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785729 3 + 115148730 att i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189684189 3 - 190850796 atc i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13173822 3 - 14256875 atc i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11290132 3 - 11315646 ATT i otoGar3.GL873580 C 0 I 2567 s canFam3.chr16 17007878 3 - 59632846 ATT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1515453 3 - 2520184 att i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1064994 3433 - 2196201 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453718 3989 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I a score=23213.000000 s hg38.chr4_KI270789v1_alt 193274 10 + 205944 agtttataaa s panTro5.chr4 192978207 10 + 194502333 agtttataaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862653 10 + 195804263 agtttataaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894831 10 + 4876863 agcttataaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785732 10 + 115148730 agtttataaa i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189684192 10 - 190850796 actgtacaaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13173825 10 - 14256875 aatgtacaaa i saiBol1.JH378165 C 0 C 0 s canFam3.chr16 17007881 10 - 59632846 AGTTCATAAA i canFam3.chr16 C 0 I 1951 s dasNov3.JH570353 1515456 10 - 2520184 aatttataaa i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1064994 3433 - 2196201 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453718 3989 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=2548.000000 s hg38.chr4_KI270789v1_alt 193284 1 + 205944 a s panTro5.chr4 192978217 1 + 194502333 a i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862663 1 + 195804263 a i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894841 1 + 4876863 a i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112785742 1 + 115148730 a i nomLeu3.chr7b C 0 I 3419 s calJac3.chr3 189684202 1 - 190850796 a i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13173835 1 - 14256875 a i saiBol1.JH378165 C 0 C 0 s dasNov3.JH570353 1515466 1 - 2520184 a i dasNov3.JH570353 C 0 I 2347 e cebCap1.NW_016107886v1 1064994 3433 - 2196201 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453718 3989 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=87141.000000 s hg38.chr4_KI270789v1_alt 193285 106 + 205944 atcactagcattcctgtacaccaccgacaaccaaactgagagccacatcagaaagataatttgccaccacacagaa----------aaaataaaataaaataaaataaaataaaat s panTro5.chr4 192978218 116 + 194502333 atcactagcattcctgtacaccaccaacaaccaaactgagagccacatcagaaagataatttgccaccacacagaaaaagtaaaataaaataaaataaaataaaataaaataaaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862664 101 + 195804263 atcactagcattcctgtacaccaccaacaaccaaactgagagccacatcagaaagataatttgccaccacacagaa---------------aaagtaaaataaaataaaataaaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894842 96 + 4876863 atcactagcatttgtgtacaccaccaacaaccaaactgagagccaaatcagaaagttaatttgccaccacacagaa--------------------aaaatgaaataaaataaaat i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189684203 81 - 190850796 gtcactagcattcctatacactaccaacaaccaaactgagagtcaaatc----agacaatatgtcaccaaaaaaaa--------------------aaaaaaaaa----------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13173836 91 - 14256875 gtcactagcattcctatacactaccgacaaccaaac--agagtcaaatcagaaagacaatttgccgccaaaaaaaa--------------------aaaaaaaaaaaaaaaaa--- i saiBol1.JH378165 C 0 C 0 e cebCap1.NW_016107886v1 1064994 3433 - 2196201 I e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3453718 3989 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e nomLeu3.chr7b 112785743 3419 + 115148730 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=2417.000000 s hg38.chr4_KI270789v1_alt 193391 5 + 205944 -aaaat s panTro5.chr4 192978334 5 + 194502333 -aaaat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862765 5 + 195804263 -aaaat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894938 5 + 4876863 -aaaat i gorGor5.CYUI01015356v1 C 0 C 0 s saiBol1.JH378165 13173927 5 - 14256875 aaaaa- i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3457707 5 - 5030052 aaaaa- i aotNan1.NW_018492112v1 I 3989 C 0 e calJac3.chr3 189684284 0 - 190850796 C e cebCap1.NW_016107886v1 1064994 3433 - 2196201 I e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e nomLeu3.chr7b 112785743 3419 + 115148730 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=786710.000000 s hg38.chr4_KI270789v1_alt 193396 366 + 205944 aaaataaaaaagacctgggaatgcagctaaccaaggaggggaaagatgtctacaatgagaattatgaaacactgctcaaagaagttagagaagacacaaacaaatggagaaacattccatgctcgtggataggaagattcaatataaataaaatagctatgctggacaaagcaatttacagattcaatgctattcctatcaaactatcagcgacatacttcacagaactag-aaaaaattatttaaagatttatatggaacc-aaaaaagagcccaaagagccaaggcaattctaagcaaaaagaataaagctggagaaatcatgttacctgacttcaaactatactacaaggctgcagtggccaaag s panTro5.chr4 192978339 366 + 194502333 aaaataaaaaagacctgggaatacagctaaccaaggaggggaaagatgtctacaatgagaattacgaaacactgctcaaagaagttagagaagacacaaacaaatggagaaacattccatgctcatggataggaagattcaatataactaaaatagctatgctggacaaagcaatttacagattcaatgctattcctatcaaactatcagcgacatacttcacagaactag-aaaaaattatttaaaaatttatatggaacc-aaaaaagagcccaaagagccaaggcaattctaagcaaaaagaataaagctggagaaatcatgttacctgacttcaaactatactacaaggctgcagtggccaaag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192862770 366 + 195804263 aaaataaaaaagacctgggaatacagctaaccaaggaggggaaagatgtctacaatgagaattacgaaacactgctcaaagaagttagagaagacacaaacaaatggagaaacattccatgctcatggataggaagattcaatataactaaaatagctatgctggacaaagcaatttacagattcaatgctattcctatcaaactatcagcgacatacttcacagaactag-aaaaaattatttaaaaatttatatggaacc-aaaaaagagcccaaagagccaaggcaattctaagcaaaaagaataaagctggagaaatcatgttacctgacttcaaactatactacaaggctgcagtggccaaag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3894943 366 + 4876863 aaaataaaaaagacctgggaataccgctaaccagggaggggaaatatgtctacaatgagaattacgaaacactgctcaaagaagttagagaagacacaaacaaatggagaaacattccatgctcatggataggaagattcaatataactaaaatagctatgctggacaaagcaatttacagattcaatgctattcctatcaaactatcagcgacatacttcacagaactag-aaaaaattatttaaacatttatatggaacc-aaaaaagagcccaaagagccaaggcagttctaagcaaaaagaacaaagctggagaaatcatgttacctgacttcaaactatactacaaggctgcagtggccaaag i gorGor5.CYUI01015356v1 C 0 C 0 s calJac3.chr3 189684284 355 - 190850796 ------------atctggaaatacagctaaccagggaggggaaagatctctataatgagaattagaaaacactgctcaaagaaatcagaaaagacacaaacaaatggaaaaccattccatcctcatggataagaagaatcagtatcattatagtggctatactgagcaaagaaatgtacagattcaatgctatttctatcaaactatgagtgacattcttcacagaactagaaaaaaactacttaaaactttttaaggaaccaaaaaaagagcccaaatagccaaggcaattctaagcaaaaagagcaaagctggagaaaacatgttatctgactcc-aattaaactacaaggctacagtgaccaaag i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13173932 367 - 14256875 aaaaaaaaaaagacctgggaatacagctaaccagggagggggaagaaatttgtaatgagaattacaaaacactgctcaaagaaatcagaaaagacagaaacagatggaaaactcttccatcctcatggataagaagaatcaatatcattataatggctatactgaccaaagtaatgtacagattcaatgctattccgatcaaactataagtgacattcttcacagaactag-aaaaaattacttaaacctttataaggaaccaaaaaaagagcccaaatagccaaggcaattctaagcaaaaagaacaaagctggaagatacatgttatctgacttcaaattatacaacaaggctacagtgaccaaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1068427 367 - 2196201 aaaataaaaaagacctgggaatacagctaaccagggaggggaaagatctctataatgagaattacaaaacactgctcaaagaaatcagaaaagacacaaacaaatgaaaaactgttccatcctcatggataagaagaatcaatatcattataatggctatactgaccaaagtaatgtgcagattcaatgctattcctatcaaactatgggtgacattcttcagagaactag-aaaaaattacttaaaactttataaggagccaaaaaaagagcccaaatagccaaggcaattctaagcaaaaagaacaaaactggaggatacatgttatctgacttcaaactatactacaaggttacagtgaccaaaa i cebCap1.NW_016107886v1 I 3433 C 0 s aotNan1.NW_018492112v1 3457712 368 - 5030052 aaaaaaaaaaagatctgagaatacaactaaccagggaggggaaagatctctatgaggagaattacaaaacactgctgaaagacatcagaaaagacacaaacaaatggaaaactgttccatcctcatggataagaagaatcagtatcattataatggctatactgaccaaagcaatgtacagattcaatgctattcctatcaaactatgagtgacattcttcacagaactagaaaaaacttatttaaaactttataaggaaccaaaaaaagagcccaaatagccaaggcaattctaagcaaaaagaacaaagctggaggaaacatgttatctgatttcaaactatactacaaggctacagtgaccaaaa i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e nomLeu3.chr7b 112785743 3419 + 115148730 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=1723899.000000 s hg38.chr4_KI270789v1_alt 193762 612 + 205944 cagaatggtactggtacaaaaacaggcacatagaccaatggaaccgaatagaaaccccagaaatacagccacacacctatgaccatctgacctttgacaaagctgacaaaaataagcaatagggaaaagactcccttttcaataaatggtgctgggataacttactagccatatgcagaaaattgaagctggactctttctt---------tacaaaaatcagctcaagatggattaaagatctaaaactataaaaaccctgggaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcataacaaagacaccaaaagcaatcacaacaaaagtaaaaattgactaacgggatctaattaaacgtaagagtttctgcacagcaaaataaatgat--caacagtgtaaacagacaacttacagaatgggagaaaatatttgtaaattatgcatctgacaaaggtctgatatccaccatctataagtaacttaaacacatttacaggagaaaaatcaaacaacctgattcaacagagggcaaaggacaggaacagacatacatgcagccaacaagcatgtg-aaaaaaagctcagtatcactgaccattaaa s panTro5.chr4 192978705 612 + 194502333 cagaatggtactagtacaaaaacaggcacatagaccaatggaaccgaatagaaaccccagaaatacagccacacacctatgaccatctgacctttgacaaagctgacaaaaataagcaatagggaaaagactcccttttcaataaatggtgctgggataacttactagccatatgcagaaaattgaagctggaccctttctt---------tacaaaaatcagctcaagatggattaaagatctaaaactataaaaaccctgggaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcataacaaagacaccaaaagcaatcacaacaaaagtaaaaattgactaacgggatctaattaaacgtaagagtttctgcacagcaaaataaatgat--caacagtgtaaacagacaacttacagaatgagagaaaatatttgtaaattatgcatctgacaaaggtctgatatccactatctataagtaacttaaacacatttacaggagaaaaatcaaatgacctgattcaacagagggcaaaggacaggaacagacatacatgcagccaacaagcatgtg-aaaaaaagctcagtatcactgaccattaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192863136 612 + 195804263 cagaatggtactagtgcaaaaacaggcacatagaccaatggaaccgaatagaaaccccagaaatacagccacacacctatgaccatctgacctttgacaaagctgacaaaaataagcaatagggaaaagactcccttttcaataaatggtgctgggataacttactagccatatgcagaaaattgaagctggaccctttctt---------tacaaaaatcagctcaagatggattaaagatctaaaattataaaaaccctgggaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcataacaaagacaccaaaagcaatcacaacaaaagtaaaaattgactaacgggatctaattaaacgtaagagtttctgcacagcaaaataaatgat--caacagtgtaaacagacaacttacagaatgggagaaaatatttgtaaattatgcatctgacaaaggtctgatatccactatctataagtaacttaaacacatttacaggagaaaaatcaaacgacctgattcaacagagggcaaaggacaggaacagacatacatgcagccaacaagcatgtg-aaaaaaagctcagtatcactgaccattaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3895309 613 + 4876863 cagaatggtactggtacaaaaacaggcacatagaccaatggaaccgaatagaaactccagaaatacagcggcacacctgtgaccatctgacctttgacaaagctgacaaaaataagcaatagggaaaagactcccttttcaataaatggtgctgggataacttactagcaatatgcagaaaattgaagctggaccctttctt---------tacaaaaatcagctcaagatggattaaagatctaaaactataaaaaccctggaaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcataacaaagacaccaaaagcaatcacaacaaaggtaaaaattgactgacgggatctaattaaacgtaagagtttctgcacagcaaaataaatgat--caacagtgtaaacagataacttacagaatgggagaaaatatttgtaaattatgcatctgacaaaggtctgatatccactatctgtaagtaacttaaacacatttacaggagaaaaatcaaacgacctgattcaacagagggcaaaggacaggaacagacatacatgcagccaacaagcatatgaaaaaaaagctcagtatcactgaccattaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112789162 595 + 115148730 cagaatggtactggtacaaaaacaggcatacagaccaatggaaccaaatagaaaccccagagataaggccgcacacctgtgaccatctgacctttgacaaagctgacaaaaataagcaataggtaaaagactccttattcaataaatggtgctgggataactt-ctagccatatgcataaaattgaagctggatcctttctt---------tacaaaaatcagctcaagatggattaaagacctaaaactataaaaaccctggaaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcataacaaagacaccaaaagcaattgcgacaaaagtaaaaattgacaaatgggatctaattaaaagtaagagtttctgcacagcaaaataaacgat--caacagtgtaaacagacaacttacagaatgggagaaaatatttgtaaactatgcatctgacaaaggtctgatatccagcatctgtaagtaacttaaacaaatttacaggagaaaaatcgaacaacctgattgaacagtgggcaaaggacaggaacagacatacatgcaaccaataagtatatg-aaacaaagctcag----------------a i nomLeu3.chr7b I 3419 C 0 s calJac3.chr3 189684639 615 - 190850796 cagcatggtattggtacaaaaacaggcacacagaccaatggaatagaatagaggcctcagaaataaggctgcacacgtataaccatctgacttttgataaagccgacaaaaacaagcaatggggaaaagattccctattcaataaatggtgctgggataac--attagccatatgcagaagattgaagctggaccccttcctcacaccatatacaaaaatcagctcaagatggattaaatactcaaaactataaaaaccctggaaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcatgacaaggacaccaaaagcaattg-aacaaaggtaaaaattgacaaatgggatctaactaaacttaagagtttctgcacagcaaaagaaatgatcccaacagtgtaaacagacaacttacagaatgggagaaaatatttgcaaattatgcatctgacagaggtctaagatccagcatctataagcaacttaaacaaatttacaggtgaaa-----aacaaccccattaaacagtgagcaaaggacatgaacagacatacatgcagccagcaagcgtata-aaataaagtacggtattactgatcattaga i calJac3.chr3 C 0 I 6 s saiBol1.JH378165 13174299 615 - 14256875 cagcatggtattgatacaaaaacaggcacacagatcaatggaacaaaatagaaacctcagaaataaggctgcacacctatgaccatctgacttttgacaaagctgacaaaaacaagcaatggggaaaagactccctattcaatgcatggtgctggggtaacttattagccatatgcagaagattgaagctagaccccttccttacaccatatacaaaaatcagctcaagatggattaaatactcaaaacgataaaaaccctggaaaacaacctaggtaataccatcctggacataggaacgggcaaagatttcatgacaaggatgccaaaagcaattg-aacaaaggtaaaagttgacagatgggatctaattaaacttaggagtttctacacagcaaaagaaatgatcccaacaatgtaaacagacaacttacagaatgggagaaaatatttgcaaattatgca--tgacaaaggtctaatatccagcatctataagcaactcaaacaaatttacaggagaaa-----aacaaccccattaaacagtgggcaaaggccatgaacagacatacatgcagcgaacaagcatata-aaataaagtttggtatgactgatcattaga i saiBol1.JH378165 C 0 I 6 s cebCap1.NW_016107886v1 1068794 615 - 2196201 cagcatggtattggtacaaaaacaggcacagagaccaatggaacagaatagagacctcagaaataaggctgcacacctatgaccatctgacttttgacaaagctaacaaaaacaagcaatggggaaaagactccctattcaataaatggtgctgggataacttattagcgatatgcagaagattgaagctgtaccccttccttacaccatatacaaagatcagctcaagatggattaaatactcaaaactataaaaaccctggaaaacaacctaggtaataccatcctggacacaggaacgggcaaagatttcatgacaaggacaccaaaagcaatcg-aacaaaggtaaaaattgacagacgggatctaattaaac--aagagtttctgcacagcaaaagaaacgatcccaacagtgtaaacagacaacttacagaatgggagaaaatatttgcaaattatgcatctgataaaggtctaatatccagcgtctataagcaacttaaacaaatttacaggagaaa-----aacaaccccattaaacagtgggcaaaggacatgaacagacatacatgcagccaacaagcatata-aaataaagttcgttatgactgatcattaga i cebCap1.NW_016107886v1 C 0 I 21 s aotNan1.NW_018492112v1 3458080 611 - 5030052 cagcatagtattggtacaaaaacaggcaaacagaccaatggaacagaatagagacctcagaaataaggctgcacacctatgaccatctgacttttgacaaagctgacaaaaacaagcaatggggaaaagactccctattcaataaatggttctgggataacttattagccacatgcagaagactgaagct------cttccttacaccatatacaaaaatcagctcaagatggattgaatactcaaaactataaaaaccctggaaaacaacctaggtaataccatcctggacataggagtgggcaaagatttcatgacaaggacaccaaaagcaattg-aacaaaagtaaaaattgacaaatgggatctaattaaacttaagagtttctgcacagcaaaataaatgatcccaacagtgtaaacagacaacttacagaatgggagaaaatatttgcaaattatgcatctgacaaaggtctaatatccagcatctataagcaacttaaacacatttacaggagaaa-----aacaatcccattaaacagtgggcaaaggacatgaacagacatacatgcagccaacaagcatatg-aaataaagttcgatatcactgataattaga i aotNan1.NW_018492112v1 C 0 I 6 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=30673.000000 s hg38.chr4_KI270789v1_alt 194374 16 + 205944 gaaatgcaaaacaaaa s panTro5.chr4 192979317 16 + 194502333 gaaatgcaaaacaaaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192863748 16 + 195804263 gaaatgcaaaacaaaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3895922 16 + 4876863 gaaatgcaaaacaaaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112789757 16 + 115148730 gaaatgcaaaacaaaa i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189685260 16 - 190850796 gatttgcgaaacacaa i calJac3.chr3 I 6 C 0 s saiBol1.JH378165 13174920 16 - 14256875 gatttgccaaacaaaa i saiBol1.JH378165 I 6 C 0 s aotNan1.NW_018492112v1 3458697 16 - 5030052 gatttgctaaacaaaa i aotNan1.NW_018492112v1 I 6 C 0 e cebCap1.NW_016107886v1 1069409 21 - 2196201 I e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=436570.000000 s hg38.chr4_KI270789v1_alt 194390 165 + 205944 ccccaatgag-taccatctcgcaccagtctgaatggctgttattagaaagtcaaaaaataaca---gctggtgaggttgtgaaggaaagggaacacttaaacactgttggtggaagtgtaaattagttcggccattgtagaagacagtgtggcgattcctcaaagaccc s panTro5.chr4 192979333 166 + 194502333 ccccaatgagataccatctcgcaccagtctgaatggctgttattagaaagtcaaaaaatagca---gctggtgaggttgtgaaggaaagggaacacttaaacactgttggtggaagtgtaaattagttcagccattgtagaagacagtgtggcaattcctcgaagaccc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192863764 166 + 195804263 ccccaatgagataccatctcgcaccagtctgaatggctgttattagaaagtcaaaaaatagca---gctggtgaggttgtgaaggaaagggaacacttaaacactgttggtggaagtgtaaattagttcagccattgtagaagacagtgtggcaattcctcgaagaccc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3895938 165 + 4876863 ccccaatgagataccatctcgcaccagtctgaatggctgttattagaaagtc-aaaaataaca---gctggtgaggttgtgaagaaaagggaacacttaaacactgttggtggaagtgtaaattagttcggccattgtagaagacagtgtggcgattcctcaaagaccc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112789773 166 + 115148730 ccctgatgagatactatctcacaccagtcagaatggctgttattagaaagccaaaaaataaca---gctggtgaggttgtgaagaaaagggaacacttatacattgttggtggaagtgtaaattagttcggccattgtagaagacagtatggcgattcctcaaagacct i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189685276 168 - 190850796 ccccgatgagataccacttcacaggagtcagaatggctgtgactagagagccaaaaagtgacagatgctggtgagcctgtgaag-aaagggaacacttatacactgttgatgggtgtgttaatcagttcagccgctgtagaggacagtgtggtgattcctcaaaagcct i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13174936 168 - 14256875 ccctgatgagataccgcttcacagtagtcagaatggctattactagaaagccaaaaactgacagatgctggtgagatcgtgaag-aaagagaacatttatacactattgatggaagtgtaaatcagttcagccattgtagaggacagtgtggtgattcctcaaaaacct i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1069430 166 - 2196201 ccccgatgagataccacttcacagtagtcagaatggctattactagaaagccaaaaactgacagatgctgctgaggttgtgaag-aaagggaacacttacacac--tttatgggagtgtaaattagttcagccattgtagaggacagtgtggtgattcctcaaaaacct i cebCap1.NW_016107886v1 I 21 C 0 s aotNan1.NW_018492112v1 3458713 168 - 5030052 cgccgatgagataccacttcacagtagtcagaatggttattactagaaagccaaaaactgacagatgctggtgagattgtgaag-aaaaggaacacttatacactattgatgggagtgtaaattagttcagccattgtagaggacagtgtggtgattcctcaaaaacct i aotNan1.NW_018492112v1 C 0 I 9 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=17326.000000 s hg38.chr4_KI270789v1_alt 194555 20 + 205944 gaagtcagaaataccattag s panTro5.chr4 192979499 20 + 194502333 gaagtcagaaataccattag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192863930 20 + 195804263 gaagtcagaaataccattag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896103 20 + 4876863 gaagtcagaaataccattag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112789939 20 + 115148730 gaagtcagaaataccattag i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189685444 11 - 190850796 --------aaagacagtcg- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175104 11 - 14256875 --------aaagacaatca- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1069596 11 - 2196201 --------aaagacaatca- i cebCap1.NW_016107886v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e aotNan1.NW_018492112v1 3458881 9 - 5030052 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=667537.000000 s hg38.chr4_KI270789v1_alt 194575 252 + 205944 acccagcaatcccattactgggtgtgtacccagaggagtgtaaagcattctacctaaaattcacatgcacgtgaatgctcattgcagcactattcacaatagcaaagacaaggaatcaacctcaatgcccaccagtgacagactggatcgagaaaatgtggtacatatagactatggaatactatgcagcca-gaaaaagaatgaggccatttcttttgtgagaacgt-tatggagctggaggctatcatcctt s panTro5.chr4 192979519 252 + 194502333 acccagcaatcccattactgggtgtgtacccagaggagtgtaaagcattctacctaaaattcacatgcacgtgaatgctcattgcagcactattcacaatagcaaagacaaggaatcaacctcaatgcccaccaatgacagactggatcgagaaaatgtggtacatatacactatggaatactatgcagcca-gaaaaagaatgaggccatttcttttgtgagaacgt-tatggagctggaggctatcatcctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192863950 252 + 195804263 acccagcaatcccattactgggtgtgtacccagaggagtgtaaagcattctacctaaaattcacatgcacgtgaatgctcattgcagcactattcacaatagcaaagacaaggaatcaacctcaatgcccaccaatgacagactggatcgagaaaatgtggtacatatacactatggaatactatgcagcca-gaaaaagaatgaggccatttcttttgtgagaacgt-tatggagctggaggctatcatcctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896123 252 + 4876863 acccagcaatcccattactgggtgtgtacccagaggagtgtaaagcattctaccttaaattcacatgcacgtgaatgctcattgcagcactattcacaatagcaaagacaaggaatcaacctcaatgcccaccaatgacagactggatcgagaaaatgtggtacatatacactatggaatactatgcagcca-gaaaaagaatgaggccatttcttttgtgagaacat-tgtggagctggaggctatcatcctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112789959 244 + 115148730 acccagccatcccattactgggtgtgtacccagaggagtgtaaagcat--------gaagacacatgcacatgaatgctcaatgcagtgctatttacaatagcaaagacaaggactcaacctaaatgcccaccaatgacagattggataaagaaagtgtggtacatatacactatggaatactatgcagcca-taaaaaggatgaggccatttcttttgtgagaacat-tacagagctggaggctatcatcctt i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 189685455 254 - 190850796 agccagcaatcccattactgggtatgtacccagaggaatagaaagcattctgccataaagacacatgcccgggagtgctcaatgccacactatttacaatagcaaagacgtggaatcaacctcaatgcccagcaatgacagactggataaagaaaatgtggtgcatatgcacaatggaaagctatgcagccataaaaaagaatgaggtcatttcttttgcaggaagatagatagagctggaggctgtcattctg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175115 254 - 14256875 agccagcaatcccattactgggtatgtacccagaggaatataaagcactctaccataaagacccatgcacaggaatgctcactgccacactatttacaataggaaaggcatggaatcaacctaaatgcccacccatgacagactggataaagaaaatgtggtacatatacacagtggaaaactatgcagccataaaaaagaatgaggtcatttcttttgcaggaacatagacagagctggaggctgtcattctg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1069607 250 - 2196201 agccggcaatcccattactgggtatgcacccagaggaatataaagcattctaccataaagacacatgcacaggaatgctcactgccacactatttacaatagcaaagacacggaatcagcctaaatgcccaccaatgacagactggataaagaaaatgtggtacatatacacaatggaaaactatgcagccaaaaaaaagaatgaggtcatttcttttgcgggaacat----agagctggaggctgtcattctg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3458890 241 - 5030052 agccagcaatcccattactgggtatgtacccagaggaatataaagcattctaccataaagacacatgcacaggaatgctcactgctgcactatttaca-------------ggaatcaacctaaatgcccaccaatgacagactggataaagaaaatctggtacatatacacaatggaaagctatgcagccataaaaaagaatgagatcatttcttttgcgggaacatagatagagcgggaggctgtcattctg i aotNan1.NW_018492112v1 I 9 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e macFas5.chr5 188003960 76 + 189454096 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=269443.000000 s hg38.chr4_KI270789v1_alt 194827 90 + 205944 agcaaactaatacatgaatagaaaatgaagtccaggtgcggtggctcacgcttgtaatcccagaac-tttgggaggacgaggcgggcagat s panTro5.chr4 192979771 90 + 194502333 agcaaactaatacatgaatagaaaatgaagtccaggtgcggtggctcacgcttgtaatcccagaac-tttgggaggacgaggcgggcagat i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864202 90 + 195804263 agcaaactaatacatgaatagaaaatgaagtccaggtgcggtggctcacgcttgtaatcccagaac-tttgggaggacgaggcgggcagat i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896375 90 + 4876863 agcaaactaatacttgaatagaaaatgaagtccaggtgcggtggctcacgcttgtaatcccagaac-tttgggaggacgaggcgggcagat i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790203 90 + 115148730 agcaaactaatacatgaacagaaaatgaagtccaggtgcggtggctcacgcttgtaatcccagaac-tttgggaggacgaggcgggcagat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188004036 78 + 189454096 AACAAACAAAAAC----ACATAAAA-GTAggctgggtgcagtggctcacacctgtaatgccagcac-tttaggagcccgaggaa------- i macFas5.chr5 I 76 C 0 s calJac3.chr3 189685709 91 - 190850796 agcaaacaaatgcacgaatagaaaatgaacaccgggtgtggtggctcgtgcctgtaatcccagcacttttaggaggctgaggcgggtggat i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175369 90 - 14256875 agcaaactaatgcacgaatagaaaatgaacaccgggtgtggtggctcgtgcctgtaatcccagcac-tttaggaggctgaggtgggtggat i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1069857 90 - 2196201 agcaaactaatgcatgaatagaaaatgaacaccaggtgtggtggctcgtgcctgtaatcccagcac-tttaggagaccgaggtgggtggat i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459131 90 - 5030052 agcaaacaaacgcactaatagaaaatgaacactgcgtgtggtggctcgtgcctgtaatcccagcac-tgtaggaggctgaggcgggtggat i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e colAng1.NW_012116221v1 946812 196 + 2368649 I e manLeu1.NW_012107108v1 4946 162 + 1527111 I e chlSab2.chr7 134381024 158 + 135778131 I e cerAty1.NW_012001672v1 3424935 162 + 4669795 I e macNem1.NW_012013133v1 24394360 162 - 25927173 I e rheMac8.chr5 189060283 162 + 190429646 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=1509547.000000 s hg38.chr4_KI270789v1_alt 194917 182 + 205944 cacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaat--aa-aaaaaaaaaaaaattagccaggcgtggtggt-----gcatgcctgtagtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aatccaggaggcagaggttgtagtgagctgaga s panTro5.chr4 192979861 184 + 194502333 cacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccgcatctctactaaaaatacaa-aaaaaaaaaaaaattagccaggcgtggtggc-----gcatgcctgtagtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aatccaggaggcagaggttgtagtgagctgaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864292 185 + 195804263 cacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaacaacaacaaaaaaattagccaggcgtggtggc-----gcatgcctgtagtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aatccaggaggcagaggttgtagtgagctgaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896465 182 + 4876863 cacttgaggtcaggagtttgagaccagcctggccaacatggtgaaactccatctctactaaaaat--ac-aacaaaaaaaaaattagccaggtgtggtggc-----gggtgcctgtagtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aatccaggaggcagaggttgtagtgagctgaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790293 178 + 115148730 cacttgaagtcaggagttcgagaccagcctggccaacatggtgaagccccatctctactaaaaatacaa-------aaaaaaattagctgggcatggtggc-----acatgcctgtagtcccagcta--ctcgggaggttgaggcaggagaattgcttg-----aacccaggaggcagaggttgcggtgagctgaga i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060445 177 + 190429646 cacctgaggtcaggagttcgagaccagcctgatgaacatggtaaaaccccgtctttgct-aaaatacaa-------aaaaaaattagccaggtgtggtgcc-----gcatgcctgtggtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aacccaggaggcagaggttgcagtgagctgaga i rheMac8.chr5 I 162 C 0 s macFas5.chr5 188004114 182 + 189454096 cacctgaggtcaggagttcgagaccagcctgatgaacacggtgaaaccccgtctctgct-aaaatacaa-------aaaaaaattagccaggtgtggtgcc-----gcatgcctgtggtcccagcta--ctcgggaggctgaggcaggagaattgcttgaacccaacccaggaggcagaggttgcagtgagctgaga i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24394522 177 - 25927173 cacctgaggtcaggagttcgagaccagcctgatgaacacggtgaaaccccgtctctgct-aaaatacaa-------aaaaaaattagccaggtgtggtgcc-----gcatgcctgtggtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aacccaggaggcagaggttgcagtgagctgaga i macNem1.NW_012013133v1 I 162 I 20 s cerAty1.NW_012001672v1 3425097 177 + 4669795 cacctgaggtcaggagttcgagaccagcctggtgaacacggtgaaaccccgtctctgct-aaaatacaa-------aaaaaaattagccaggtgtggtgcc-----acatgcctgtggtcctagcta--ctcgggaggctgaggcaggagaattgcttg-----aacccaggaggcagaggttgcagtgagctgaga i cerAty1.NW_012001672v1 I 162 C 0 s chlSab2.chr7 134381182 177 + 135778131 cacctgaggtcaggagttcgagaccagcctgatgaacatggtgaaaccccgtctctgct-aaaatacaa-------aaaaaaattagccaggtgtggtgcc-----gcatgcctgtggtcccagcta--cttgggaggctgaggcaggagaattgcttg-----aacccaggaggcagaggttgcagtgagctgaga i chlSab2.chr7 I 158 C 0 s manLeu1.NW_012107108v1 5108 182 + 1527111 cacttgaggtcaggagttcgagaccagcctgatgaacacggtgaaaccctgtctctgct-aaaatacaa-------aaaaaaattagccaggtgtggtgccacgtggcgtgcctgtggtcccagcta--ctcgggaggctgaggcaggagaattgcttg-----aacccaggaggcagaggttgcagtgagctgaga i manLeu1.NW_012107108v1 I 162 C 0 s colAng1.NW_012116221v1 947008 173 + 2368649 cacctgaggtcaggagttcgagaccagcctgatgaacacggtgaaaccccatctctgct-aaaatac-a-------aaaaaaattagccaggtgtggt--------gcatgcctgtggtcccagcta--ctcgggaggctgaggcaggagaatcgcttg-----aacccaggaggcagaggttgcagtgagctgaga i colAng1.NW_012116221v1 I 196 C 0 s calJac3.chr3 189685800 160 - 190850796 cacttgaggt-----------------tcagttcaacatggtgaatcaccatctctactaaaaatacaa--------aaatcattagctgggcctggtggt-----atgtacctctaatctaagcta--cttgggaggctgaggcaggaaaatcatctg-----aacctggaaggcggaggttgcagtgagctgaga i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175459 178 - 14256875 cacttgaggtcaggagttcaacaccagtctggccaacatagtgaaacaccgtctctactaaaaatacaa--------aaatcattagctgggcctggtggt-----gtgtgcctctagg-gaggttagtattgggaggctgaggcaggagaatcgtttg-----aacctggaaggcagaggttgcagtgagctgaga i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1069947 177 - 2196201 cacttgaggtcaggagttcaacaccagtctggccaacatggtgaaacgccgtctctactaaaaatacga--------aaatcattagctgggcctggtggc-----gtgtgcctctaatctcagcta--ctttggaggctgaggcaggagaatcctttg-----aatctggaaggcagaggttgcagtgagctgaga i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459221 177 - 5030052 cacttgaggtcaggggttcaacaccagtctggccaacatggtgaaaagccgtctctactaaaaatacaa--------aaatcattagctaggcctggtggt-----gtgtgcctctaatctcagcta--cttgggaggctgaggcaggagaatcatttg-----aacctggaaggcagaggttgcagtgagctgaga i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=190544.000000 s hg38.chr4_KI270789v1_alt 195099 47 + 205944 ttgcaccactgcactccagcaggggtgacagagcg-------------------agattccgtctc s panTro5.chr4 192980045 47 + 194502333 ttgcaccactgcactccagcaggggtgacagagca-------------------agattccgtctc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864477 47 + 195804263 ttgcaccactgcactccagcaggggtgacagagca-------------------agattccgtctc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896647 47 + 4876863 ctgcaccactgcactccagcaggggtgacacagca-------------------agattccgtccc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790471 47 + 115148730 ttgtgccactgtgctccggcagggggggcagagca-------------------agattccgtctc i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060622 47 + 190429646 ctgcgccactgcactccagcctaggcgacagagta-------------------agactctgtctc i rheMac8.chr5 C 0 I 27 s macFas5.chr5 188004296 8 + 189454096 --------------------CTA--------------------------------------GTCTC i macFas5.chr5 C 0 I 12 s cerAty1.NW_012001672v1 3425274 47 + 4669795 ctgcgccactgcactccagcctgggcgacagagtg-------------------agactctgtctc i cerAty1.NW_012001672v1 C 0 I 16 s chlSab2.chr7 134381359 45 + 135778131 ctgcgccactgcactccagcctgggcgacagagtg-------------------aga--ctgtctc i chlSab2.chr7 C 0 I 11 s manLeu1.NW_012107108v1 5290 47 + 1527111 ctgcgccactgcactccagcctgggcgacagagtg-------------------agactctgtctc i manLeu1.NW_012107108v1 C 0 I 11 s colAng1.NW_012116221v1 947181 47 + 2368649 ctgtgacactacactccagcctgggtgacagagtg-------------------agactctgtctc i colAng1.NW_012116221v1 C 0 I 4 s calJac3.chr3 189685960 38 - 190850796 tcacaccactgcactccagcctaggtgacagatta-------------------aaa--------- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175637 38 - 14256875 tcacaccattgcactccagccagggtgacagagtt-------------------aaa--------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070124 57 - 2196201 tcacaccactgcactccagcctaggtaacagagttnnnnnnnnnnnnnnnnnnnnaa--------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459398 38 - 5030052 tcacaccactgcactccagcctagttgacagagtt-------------------aaa--------- i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e macNem1.NW_012013133v1 24394699 20 - 25927173 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=2395539.000000 s hg38.chr4_KI270789v1_alt 195146 289 + 205944 ag-aaaaaa---------aaaaa----ttagaaaaccaaataccacatgttctcac-ttataagtgggagctacgtgataagaacttatgaacac---gaaggaaacaacagatactggggactgctt---------------gaggggggagggtgagaggagggagaggagcagaaaagatcactgttgggtattgagcttaatacctgggtgatgtaataatatgtacaacaaacccccatgtcacatgtttatctatgtaacaaaccttcatatgtacccccaaacctaaaataaaaactatgaaaagaaaAAATAAA s panTro5.chr4 192980092 293 + 194502333 agaaaaaaa---------aaaaa----ttagaaaaccaaataccacatgttctcac-ttataagtgggagctacgtgataagaacttatgaacacaaagaaggaaacaacagatactggggtctgctt---------------gaggggggagggtgagaggagggagaagagcagaaaagataactgttgggtactgagcttaatacctgggtgatgtaataatatgtacaacaaacccccatgtcacatgtttatctatgtaacaaaccttcatatgtacccccaaacctaaaataaaaactatgaaaagaaaAAATAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864524 293 + 195804263 agaaaaaaa---------aaaaa----ttagaaaaccaaataccacatgttctcac-ttataagtgggagctacgtgataagaacttatgaacacaaagaaggaaacaacagatactggggtctgctt---------------gaggggggagggtgagaggagggagaagagcagaaaagataactgttgggtactgagcttaatacctgggtgatgtaataatatgtacaacaaacccccatgtcacatgtttatctatgtaacaaaccttcatatgtacccccaaacctaaaataaaaactatgaaaagaaaAAATAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896694 292 + 4876863 ag-aaaaaa---------aaaaa----ttagaaaaccaaataccacatgttctcac-ttataagtgggagctacgtgataagaacttatgaacacaaagaaggaaagaacagatactggggtctactt---------------gaggggggagggtgggaggagggagaagagcagaaaagataactgttgggtagtgagcttaatacctgggtgatgtaataatatgtacaacaaacccccatgtcacatgtttatctatgtaacaaaccttcatatgtacccccaaacctaaaataaaaactataaaaaGAAAAAATAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790518 284 + 115148730 aa-aaaaaa---------aa---------agaaaatgaa--accacatgttctcac-ttataagtgggagctacgtgataagaacttatgaacacaaaaaaggaaacagcagacactggggtctactt---------------g-tgggggagcgtggaaggagggaaaggagcagaaaagatagctattgggtactgggcttaatacctgggtgatgtaataatatgtacaacaaacccccatgtcacatgtttatctatgtcacaaaccttcatatgtaccctcaaacctaaaataaaaactacaaaaaGAAAACATAAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060696 282 + 190429646 ag-aaaaga---------aaaga----aaagaaaatgaaacaccacatgttctcac-ttataagtgggaactacgtgatgagaacttatgaacacaaagaaggaaacaacagacac--gggtccactt---------------gatggggaagtgtgggaggagggagagcagcaggaaagatagctattgggtactgggcttaatacctgggtgacgtaatcatatgtacaacaaagccccat-tcacatgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaga-------aaa i rheMac8.chr5 I 27 C 0 s macFas5.chr5 188004316 282 + 189454096 aa-aaaaga---------aaaga----aaagaaaatgaaacaccacatgttctcac-ttataagtgggaactacgtgatgagaacttatgaacacaaagaaggaaacaacagacac--gggtccactt---------------gatggggaagtgtgggaggagggagagcagcaggaaagatagctattgggtactgggcttaatacctgggtgacgtaatcatatgtacaacaaagccccat-tcacatgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaga-------aaa i macFas5.chr5 I 12 C 0 s macNem1.NW_012013133v1 24394719 282 - 25927173 ag-aaaaga---------aaaga----aaagaaaatgaaaCaccacatgttctcac-ttataagtgggaactacgtgatgagaacttatgaacacaaagaaggaaacaacagacac--gggtccactt---------------gatggggaagtgtgggaggagggagagcagcaggaaagatagctattgggtactgggcttaatacctgggtgacgtaatcatatgtacaacaaagccccat-tcacatgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactgtaaaaga-------aaa i macNem1.NW_012013133v1 I 20 C 0 s cerAty1.NW_012001672v1 3425337 282 + 4669795 aa-aaaaga---------aaaga----aAagaaaatgaaacaccacatgttctcac-ttataagtgggaactacgtgatgagaacttatgaacacaaagaaggaaacaacagacac--ggatccactt---------------gatggggaagtgtgggaggagggggagcagcaggaaagatagctattgggtactgggcttaatacctgggtgtcataatcatatgtacaacaaagccccat-tcacatgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaga-------aaa i cerAty1.NW_012001672v1 I 16 C 0 s chlSab2.chr7 134381415 291 + 135778131 aa-aaagaaaagaaaagaaaaga----aaagaaaatgaaacaccacatattctcac-ttataagtgggagctacatgatgagaacttatgaacacaaagaaggaaacaacagacac--gggtccactt---------------gatggggaagcgtgggaggagggagagcagcaggaaagatagctattgggtattgggcttaatacctgggtgacgtaatcatatgtacaacaaagccccat-tcacgtgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaga-------aaa i chlSab2.chr7 I 11 C 0 s manLeu1.NW_012107108v1 5348 285 + 1527111 aa-aaaagaaag------aaaga----aaagaaaatgaaacaccacatgttctcac-ttataagtgggaactacgtgatgagaacttatgaacacaaagaaggaaacaacagacac--gggtccactg---------------gatggggaagtgtgggaggagggagagcagcaggaaagatagctattgggtactgggcttaatacctgggtgtcataatcatatgtacaacaaagccccat-tcacgtgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaga-------aAA i manLeu1.NW_012107108v1 I 11 C 0 s colAng1.NW_012116221v1 947232 282 + 2368649 aa-aaaaaa---------aaaga----aaagaaaaTGaaataccacatgttctcac-ttataagtgggagctacgtgatgagaacttatgaacacaaagaaggaaacaacaggcac--gggtccactt---------------gatggggaaacgtgggagcagggagagctgcagaaaagatagctgttgggtcctgggcttaatacctgggtgatgtaatcatatgtacaacaaagccccat-tcacatgtttatctatgtaacaaacctttacatgtacccccaaacctaaaataaaaactataaaaaG-------AAA i colAng1.NW_012116221v1 I 4 C 0 s calJac3.chr3 189685998 297 - 190850796 aa-aaaaga---------aaaagaa--aatgaaaacgaaataccatatgttctcatgttataaatgggaactaaatgataagaacttatgaacacaaaaaatgaaacaatagacactggggtctacctgaggagggagagtgggaggagggagagtgggaggagggagaggagcagaaaaggtagctactgggcactgggcttaatacctgggtggtgtaataatatgtacaacagacccccatgacacacggttatctatgtaacaagccatcacatgtacccccaaacctaaaatacaaataat-------------gaa i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175675 281 - 14256875 aa-aaaaaa---------aaaagaaagaaagaaaaccaaataccatatgttctcgtgttataaatgggaactaa---ataagaacttgtgaacacaaagaaggaaacaacagacactggggtctactt---------------gaggtgggagagggggaggagtgagaggagcagaaaagatagctattgggtactgggcttaatacctgggagatgtaataatatatacaacagacccccatgacacacggttatctatgtaacaagccatcacatgtactcccaaacctaaaatataaataat-------------aaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070181 280 - 2196201 aa-aaaaga---------agaag----aaagaaaaaaaaataccatatgttctaatgttataaatgggaactaaatgataagaacttacgaacacaaagaaggaaacagcagacactggggtctactt---------------gaggtgggagggtgggaggagggagaggagcagaaaaggcagctattgagtactgggcttagtacctgggtgatgtaatactatgtactacaaacccccatgacacacggttatctatgtaacaagccatcacatgtacccccaaacctaaaatataaataat-------------aaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459436 280 - 5030052 aa-aaaaaa---------gaaag----aaagaaaacgaaataccatatattctcatgttataaatgggaactaaatgataagaacttatgaacacgaagaaggaaacaacagacactagggtctactt---------------gaggtgggagggtggcaggagggagaggagcagaaaaggtagctattggatactgggcttaataactgggtgatgtaataatatgtactacaaacccccacgacacacagttaactatgtaataaaccttcacatgtacccctaaacctaaaatatgaataat-------------aaa i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1515467 2347 - 2520184 I e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=24888.000000 s hg38.chr4_KI270789v1_alt 195435 3 + 205944 AAA- s panTro5.chr4 192980385 3 + 194502333 AAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864817 3 + 195804263 AAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896986 3 + 4876863 AAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790802 3 + 115148730 AAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060978 3 + 190429646 aaa- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188004598 3 + 189454096 aaa- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395001 3 - 25927173 aAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3425619 3 + 4669795 aaa- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381706 3 + 135778131 aaa- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 5633 3 + 1527111 AAA- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 947514 3 + 2368649 AAT- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189686295 3 - 190850796 aaa- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175956 3 - 14256875 aaa- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070461 3 - 2196201 aaa- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459716 3 - 5030052 aaa- i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1517814 3 - 2520184 -aat i dasNov3.JH570353 I 2347 C 0 e canFam3.chr16 17007891 1951 - 59632846 I e mm10.chr8 86659020 2004 - 129401213 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=1581.000000 s hg38.chr4_KI270789v1_alt 195438 2 + 205944 AT s panTro5.chr4 192980388 2 + 194502333 AT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864820 2 + 195804263 AT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896989 2 + 4876863 AT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790805 2 + 115148730 CT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060981 2 + 190429646 at i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188004601 2 + 189454096 at i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395004 2 - 25927173 AT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3425622 2 + 4669795 at i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381709 2 + 135778131 at i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 5636 2 + 1527111 AT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 947517 2 + 2368649 AT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189686298 2 - 190850796 TA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175959 2 - 14256875 TA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070464 2 - 2196201 TA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459719 2 - 5030052 TA i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86661024 2 - 129401213 AT i mm10.chr8 I 2004 C 0 s dasNov3.JH570353 1517817 2 - 2520184 at i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17007891 1951 - 59632846 I e otoGar3.GL873580 11290135 2567 - 11315646 I a score=374364.000000 s hg38.chr4_KI270789v1_alt 195440 29 + 205944 -AAAATCTGGGGAATTTGAGTTGGCAAAGC s panTro5.chr4 192980390 29 + 194502333 -AAAATCCTGGGAATTTGAGTTGGCAAAGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864822 29 + 195804263 -AAAATCCTGGGAATTTGAGTTGGCAAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3896991 29 + 4876863 -AAAATCTGGGGAATTTGAGTTGGCAAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790807 29 + 115148730 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189060983 29 + 190429646 -aaaATCCAGGGAATTTGAGTTGGCAAAGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188004603 29 + 189454096 -aaaaTCCAGGGAATTTGAGTTGGCAAAGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395006 29 - 25927173 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3425624 29 + 4669795 -aaaATCCAGGGAATTTGAGTTGGCAAAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381711 29 + 135778131 -aaaATCCAGGGAATTTGAGTTGGCAAAGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 5638 29 + 1527111 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 947519 29 + 2368649 -AAAATCCAGGGAATCTGAGTTGGCACAGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189686300 29 - 190850796 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175961 29 - 14256875 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070466 29 - 2196201 -AAAATCCAGGAAATTTGAGTTGGCAAAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459721 29 - 5030052 -AAAATCCAGGGAATTTGAGTTGGCAAAGC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86661026 29 - 129401213 -AAAATCCAACCAATTTGAGGTGGCAAAGC i mm10.chr8 C 0 C 0 s canFam3.chr16 17009842 29 - 59632846 -AAGATCCAGGTGTTTGAACTTGGTTAAGA i canFam3.chr16 I 1951 C 0 s dasNov3.JH570353 1517819 30 - 2520184 aaaactccagacaatttaactcaaaaaagc i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11290135 2567 - 11315646 I a score=33031.000000 s hg38.chr4_KI270789v1_alt 195469 5 + 205944 CTCTG- s panTro5.chr4 192980419 5 + 194502333 CTCTG- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864851 5 + 195804263 CTCTG- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3897020 5 + 4876863 CTCTG- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790836 5 + 115148730 CTCTG- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189061012 5 + 190429646 GTCTG- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188004632 5 + 189454096 GTCTG- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395035 5 - 25927173 GTCTG- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3425653 5 + 4669795 GTCTG- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381740 5 + 135778131 GCCTG- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 5667 5 + 1527111 GTCTG- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 947548 5 + 2368649 CTCTG- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189686329 4 - 190850796 CTC-A- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175990 5 - 14256875 CTCTG- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070495 5 - 2196201 CTCTG- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459750 5 - 5030052 CTCTG- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11292702 5 - 11315646 CTTTG- i otoGar3.GL873580 I 2567 C 0 s mm10.chr8 86661055 5 - 129401213 CCATG- i mm10.chr8 C 0 I 6673 s canFam3.chr16 17009871 3 - 59632846 --CTG- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1517849 4 - 2520184 --ctat i dasNov3.JH570353 C 0 C 0 a score=8039568.000000 s hg38.chr4_KI270789v1_alt 195474 773 + 205944 AAGTTTTAGCTATTGTGCTCTAGTCTG-TTTCACTACA-------------------------CCCCACAAATAAAAAT-TTAATTTGCAATACTGGAAAAA-GTCTTTTATGTAAAGGATAGATATGTTAGATTTTTTAAATATGCTAAATTAAGTTCTCCTCTTATTCCAGTTCACCTTGCTATTGTAAATCTATGTTTAAATAAAAGTCATCTT-CAAACAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGATGAA---A----TGTATT-AAAAAGACACACGGAAGT--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCCAGCCTG-TAAGATGTCAGAGATTATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTGAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TTCTCTTCTTTGC-------------------------------------TTCTCTTAGCTGATGGCCC-TTTTTTT--CAGCAGTT------AATT----AAAGT------------------------------------TTGAATAGCTGTCACTTGTG-----------------------------ACTAACTTCTGTGGCGTTTCCTTTGCCTGCACCTCAGACATCATCTCCTTCCATTCATTTCTTCTCAA-ATTGCGT---ACACAAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAGA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGTGTGTT---AGGAA-AC-----------AAGAAGG----TAGATCTGGAGCCAGTATAG------------------------ACTGCAGCCAGGACCGCATGTT s panTro5.chr4 192980424 773 + 194502333 AAGTTTTAGCTATTGTGCTCTAGTCTG-TTTCACTACA-------------------------CCCCACAAATAAAAAT-TTAATTTGCAATACTGGAAAAA-GTCTTTTATGTAAAGGATAGATATGTTAGATTTTTTAAATATGCTAAATTAAGTTCTCCTCTTATTCCAGTTCACCTTGCTATTGTAAATCTATGTTTAAATAAAAGTAATCTT-CAAACAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGATGAA---A----TGTATT-AAAAAGACACACGGAAGT--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCCAGCCTG-TAAGATGTCAGAGATTATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTGAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TTCTCTTCTTTGC-------------------------------------TTCTCTTAGCTGATGGCCC-TTTTTTT--CAGCAGTT------AATT----AAAGT------------------------------------TTGAATAGCCATCACTTGTG-----------------------------ACTAACTTCTGTGGCGTTTCCTTTGCCTGCACCTCAGACATCATCTCCTTCCATTCATTTCTTCTCAA-ATTGCGT---ACACAAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAGA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGTGCGTT---AGGAA-AC-----------AAGAAGG----TAGATCTGGAGCCAGTATAG------------------------ACTGCAGCCAGGACCGCATGTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192864856 773 + 195804263 AAGTTTTAGCTATTGTGCTCTAGTCTG-TTTCACTACA-------------------------CCCCACAAATAAAAAT-TTAATTTGCAATACTGGAAAAA-GTCTTTTATGTAAAGGATAGATATGTTAGATTTTTTAAATATGCTAAATTAAGTTCTCCTCTTATTCCAGTTCACCTTGCTATTGTAAATCTATGTTTAAATAAAAGTAATCTT-CAAACAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGATGAA---A----TGTATT-AAAAAGACACACGGAAGT--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCCAGCCTG-TAAGATGTCAGAGATTATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTGAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TTCTCTTCTTTGC-------------------------------------TTCTCTTAGCTGATGGCCC-TTTTTTT--CAGCAGTT------AATT----AAAGT------------------------------------TTGAATAGCCATCACTTGTG-----------------------------ACTAACTTCTGTGGCGTTTCCTTTGCCTGCACCTCAGACATCATCTCCTTCCATTCATTTCTTCTCAA-ATTGCGT---ACACAAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAGA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGTGCGTT---AGGAA-AC-----------AAGAAGG----TAGATCTGGAGCCAGTATAG------------------------ACTGCAGCCAGGACCGCATGTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3897025 768 + 4876863 AAGTTTTAGCTATTGTGCTCTAGTCTG-TTTCACTATA-------------------------CCCCACAAATAAAAAT-TTAATTT-CAATACTGGAAAAA-GTCTTTTATGTAAAGGATAGATATGTTAGA-TTTTTAAATATGCTAAATTAAGTTCTCCTCTTATTCCAGTTCACCTTGCTATTGTAAATCTATGTTTAAATAAAAGTAATCTT-CAAACAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGATGAA---A----TGTATT-AAAAAGACACACGGAAGT--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCCAGCCTG-TAAGATGTCAGAGATTATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTGAATAAA-------------------------------GGATT---AT-------------------------------CAATATTC-------------------------------------TCCTCTTCTTTGC-------------------------------------TTCTCTTAGCTGATGGCCC-TTTTTTT--CGACAGTT------AATT----AAAGT------------------------------------TTGAATAGCTGTCACTTGTG-----------------------------ACTAACTTCTGTGGCGTTTCCTTTGCCTGCACCTCAGACATCATCTCCTTCCATTCATTTCTTCTCAA-ATTTCTT---ACACAAGTG--CTCTACAAAATCATCTACGGTCAAATC--------------C-------CAGA--GAAGTAGT----AA--------TAAGAGCCATTGCAGACAGGAGGAAGTGCGTT---GGGAA-AC-----------AAGAAGG----TAGATCTGGAGCCAGTATAG------------------------ACTGCAGTCAGGACCGCATGTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112790841 763 + 115148730 AAGTCTTAACTACTGTGCTCTAGTCTG-TTTCATTATA-------------------------CCCCACAAATAAAAAT-TTAATTGGCAATACTGGAAAAA-GCCATTCA-GTAAAGGATAGATATGTTAGGTTTTTAAAATATGCTAAATTAAGTTCTCCTCTTATTCCAGTTCACATTGCTGTTGTTAATCTATATTTAAATAAAAGTAGTCTT-CAAAAAATGTTAACCAAGTTGCCTGAAGTCCACCCCTT-AACAGTCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGAAGAA---A----TGTATT-AAAAAGACACACAGAAGT--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCCAGCCTG-CAAGATGTCAGAGATTATGTGTTATTTCTATGTATATTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTTCTTTGC-------------------------------------TTCTCTTAGCCGATGGCCC-TTTTTTT--CAGTAGTT------AATT----AAAGT------------------------------------TTGAATAGCCGTCACTTGTG-----------------------------ACTAACTTCTGTGGCGTTTCCTTTGC-----CCTCAGACATCATCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTC---ACACAAGAG--CTCTCCAAAATCATCTACAGGCAAATC--------------C-------CAAA--GAAGTAGT----AA--------TAAGAGCCGTCGTAGACA----GAAGTGCCTT---GGGAA-AC-----------AAGAAGG----TAGATCTGGAGCCAGTGTAG------------------------ACTGCAGCCAGGACCACATGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189061017 830 + 190429646 AAGTCTTATCTACTGTGCTCTAGACTG-TTTCACTGCA-------------------------CCCCACAGATAAAAAT-TTAATTTCCAATACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCCTCTTCTTCCAGTTCACATTGCTATTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTCTCTATTCTTGAAATCTTGGTCTCTACTTCCTGAAA------TCTCTATTTCGGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACACATAGAAGG--------GGAATGCTTTGAAAGCAGGTCCATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTTATTTCTATGTACACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTT--CAACAGTT------AATTAAAGAAAGT------------------------------------TTCAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTAACTTCTGTGCCGTTTCCTTTTCCTGCACCTCAGACATCGTCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAAA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACTGCATGTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188004637 830 + 189454096 AAGTCTTATCTACTGTGCTCTAGACTG-TTTCACTGCA-------------------------CCCCACAGATAAAAAT-TTAATTTCCAATACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCCTCTTCTTCCAGTTCACATTGCTATTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTCTCTATTCTTGAAATCTTGGTCTCTACTTCCTGAAA------TCTCTATTTCGGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACACATAGAAGG--------GGAATGCTTTGAAAGCAGGTCCATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTTATTTCTATGTACACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTT--CAACAGTT------AATTAAAGAAAGT------------------------------------TTCAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTAACTTCTGTGCCGTTTCCTTTTCCTGCACCTCAGACATTGTCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAAA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACTGCATGTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395040 830 - 25927173 AAGTCTTATCTACTGTGCTCTAGACTG-TTTCACTGCA-------------------------CCCCACAGATAAAAAT-TTAATTTCCAATACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCCTCTTCTTCCAGTTCACATTGCTATTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGTTCTCTATTCTTGAAATCTTGGTCTCTACTTCCTGAAA------TCTCTATTTCAGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACACATAGAAGG--------GGAATGCTTTGAAAGCAGGTCCATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTTATTTCTATGTACACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTT--CAACAGTT------AATTAAAGAAAGT------------------------------------TTCAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTAACTTCTGTGCCGTTTCCTTTTCCTGCACCTCAGACATCATCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAAA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACTGCATGTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3425658 806 + 4669795 AAGTCTTATCTACTGTGCTCTAGACTG-TTTCACTGCA-------------------------CCCCACAGATAAAAAT-TTAATTTCCAATACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCCTCTTCTTCCAGTTCACATTGCTATTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACACATAGAAGG--------GGAATGCTTTGAAAGCAGGTCCATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTT--CAACAGTT------AATTAAAGAAAGT------------------------------------TTCAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTAACTTCTGTGCCATTTCCTTTTCCTGCACCTCAGACATCGTCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTC---ACACGAGTG--CTCTACAAAATCATCTACGCTCAAATC--------------C-------CAAA--GAAGTAGT----AA--------CAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---AGGAA-AC-----------AAGAAGG----TAGACTTAGAGCCAGTGTAG------------------------ACTGCAGCCAGGACCGCATGTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134381745 824 + 135778131 AAGTCTTATATACTGTGCTCTAGTCTG-TTTCACTGCA-------------------------CTCCACAGATAAAAAT-TTAATTTCTAGTACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCTTCTTCTTCCAGTTCACATTGCTGTTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAACTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACACATAGAAGG--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTCATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGATGC-TTTTTTC--CAACAGTT------AATTAAAGAAAGT------------------TTCAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTTGTTTAATAGCCATCACTAACTTCTGTGCCGTTTCCTTTTCCTGCACCTCAGACATCATCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACGGTCAAATT--------------C-------CAAA--GAAGTAGT----AA--------CAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACCGCATGTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 5672 842 + 1527111 AAGTCTTATCTACTGTGCTCTAGACTG-TTTCACTGCA-------------------------CCCCACAGATAAAAAT-TTAATTTCCAATACTGGAAAAA-GTCATTCATGTAAAGAATAGATGTGTTAGATTTTTAAAATATGCTAAATTAAGTTCTCCTCTTCTTCCAGTTCACATTGCTATTGTAAATCTACATTTAAATAAAAGTAATCAT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGGAA------TCTCTATTTCAGGACATGTACATTCTAGATGAA---A----TGTATG-AAAAAGACGCATGGAAGG--------GGAGTGCTTTGAAAGCAGGTCCATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATGATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATTTGTACCTAGTATTTTATA-----------------------------ATTTTAGTAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTCCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTC--CAACAGTT------AATTAAAGAAAGTTTCAATAGCCATCACTTGTTCAATAGCCATCACTTGTTCAATAGCCATCACTTGTTCAATAGCCATCACTTGTTCAATAGCCATCACTAACTTCTGTGCCATTTCCTTTTCCTGCACCTCAGACGTCGTCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACGCTCAAATC--------------C-------CAAA--GAAGTAGT----CA--------CAAGAGCCATTGTAGACAGGAGGAAGTGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACCGCATGTT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 947553 778 + 2368649 AAGTCTTAAGTACTGTGCTCTAGTCTG-TTTCACTGTA-------------------------CCCCACAAATAAACAT-TTAATTTGCAACACTGGAAAAA-GTCATTCATGTAAAGAATAGATATGTTAGATTTTTAAAATATGCCAAATTAAGTTCTCCTCTTCTTCCAGTTCACGTTGCTATTGTAAATCTACATTTAAATAAAAGTAATCTT-CAAAAAATATTAACCAAGTTGCCTGAAGTCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTTCTTGGTC------------------------ACTTCCTGAAA------TCTCTATTTCAGGACATGTGCATTCTAGATGAA---A----TGTATGAAAAAAGACACGTAGAAGG--------GAAATGCTTTGAAAGCAGGTACATTTTGCTTCCCTAGCCTG-CAAGATGTCAGAGATTATGTGTTATTTCTATGTATACTTTGTCCTGATGAAAATAAAATTTTATCTGTACCTAGTATTTTATA-----------------------------ATTTTAATAAA-------------------------------GGATTATAAT-------------------------------CAATATTC-------------------------------------TCCTCTTCTTTGC-------------------------------------TTTTCTTAGCTGATGGTGC-TTTTTTA--CAACAGTT------AATTAAAGAAAGT------------------------------------TTCAGTAGCCATCACTTGTG-----------------------------ACTAACTTCTGTGCCGCCTCCTTTTCCTGTACCTCAGACATCGTCTCCTTCCATTCGTTTCTTCTCAA-GTTGCTT---ACACGAGTG--CTCTACAAAATCATCTACAGTCAAATC--------------C-------CAAA--GAAGTAGT----AA--------TAAGAGCCATTGTAGACAGGAGGAAGCGCCTT---GGGAA-AC-----------AAGAAGG----TAGATTTAGAGCCAGTGTAG------------------------ACTGCAGCCGGGACTGCATGTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189686333 742 - 190850796 AAGTCTTAACTACAGTGTTCCAGTGTG-TTACACTATA-------------------------CT-CACAAATAAAAAA-TTAATTTGCGACACTGGAAAAA--ACATTCATGTAAAAGATAGATATGTTAGATTTTTAAAATATGCTAAATTAAGTTATCCTATTATTCCAGTTCACATTGCTATTGTAGATCTACATTTAAATAAAAGTAATCTT-CAAAAAATATTATCCAAGTTGCCTGAAATCCACCCCTT-AATAATCTGAGCTAATCAATCATTCTGCTTGTTC------------------------ACTCCCTGAAA------TCTCTATTTCAAGACATGTACATTCTAGACGGA---A----TGTATC-AAAAAGACACACAGAAGT--------GAAATACTTTGAGAGCAGGTAAATTTTGATTTCCCAGCCTGACAAGATGTCAGAGATTATGTGATGTTTCTATGTATACTTCGTCCTGATGAAAAT--------------------------ATG-----------------------------ATTTTAATAAA-------------------------------GGATTCTAAT-------------------------------CAATATTC-------------------------------------TCCGCCTCTCTGC-------------------------------------TTCTCTCAGTCGATGGCCC--TTTTTT--CAGCAGTC--------------AAAGT------------------------------------TTGAGTAGCCATCACTTGTG-----------------------------ACTAATTTCCACGGCATTTCCTTTCCCTGCAGTTGACACAGCATCTCCTCCCACTCGTTTGTTCTCGAGGTTGCTC---ACACACGTG--CTCTGCAAAATCATCTAGAGTCAGATC--------------C-------CAAA--TGAGTCGT----AA--------TAGGAGCCACTGTAGATGGGAGGAAGCGCCTC---GGGAA-AC-----------AAGGAGG----TGGATGTGGAGCAAGTGTAG------------------------ATGGCAGCCAGGGCCGTGTGCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13175995 770 - 14256875 AAGTCTTAACTACCGTGTTCCAGTCTG-TTACGCTATG-------------------------CT-CACAAATAAAAAA-TTAATTTGCAATACTGGAAAAAAGACATTCATGTAAAGGATAGATGTGCTAGATTTTTAAAATATGCTGAATTAAGTTCTCCTGTTATTCCAGTTCACATTGGTATTGTACATCTACATTTAAATAAAAGTAATCTT-CAAAAAATATTATCCAAGTTGCCTGAAATCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTGCTTGTTC------------------------ACTCCCTGAAA------TCTCTATTTCAAGACGTGTACATTCTAGGTGGA---A----CGTATT-AAAAAGACACACGGAAGT--------GAAATACTTTGGGAGCAGGTAAATTTTGATTCCCCAACCTGACAAGATGTCAGAGATTATGTGATATTTCTATGTATACTTCGTCCTGATGAAAATAAAATTTTGTTTGCACCTAATACTTCATG-----------------------------ATTTTAATAAA-------------------------------GGATTACAAT-------------------------------CAATATTC-------------------------------------TCCTC--CTCTGC-------------------------------------TTCTCTTAGTTGATGGCCCTTTTTTTT--CAGCAATT--------------AAAGT------------------------------------TTGAATAGCCATCACTTGTG-----------------------------ACTAATTTCTATGACATTTCCTTTCCCTGCAACTGAGGCATCATCTCCTTCCATTCATTTGTTCTCAAGGCTGCTT---ATACTTGTG--ATCTACAAAATCATCT--ACTCAGATC--------------C-------CACA--GGAGTCGT----AA--------TGGGAGCCGCTGCAGACAGGGGGAAGCGCCTCGGGGGGAA-TC-----------GAGGAGG----TGGATGTGGAGCAC-TGCAG------------------------ACTGCACCCAGGACCGTGTGCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1070500 772 - 2196201 AAGTCTTAA-TACCATGTTCCAGTCTG-TTACACTATA-------------------------CT-CACAAATAAAAAA-TTAATTTGCGATATTGGAAAAAAGACATTCATGTAAAGGACAGATATGTTAGATTTTTAAAATATGCTGAATTAAGTTCGCCTGTTACTCCAGTTCACATTGCTATTGTAGATCTACATTTAAATAAAAGTAATCTT-CAAAAAATATTATCCAAGTTGCCTGAAATCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTGCTTGTTC------------------------ACTCCCTGAAA------TCTGTATTTCAAGACATGTACGTTCTAGATGGA---A----CATATT-AAAAAGACACACAGAAGT--------GAAACACTTTGAGAGCAGGTAAATTTTGACTCCCCAACCTGACAAGATGTCAGAGATTACGTGATATTTCTATGTATAATTTGTCCTGATGAAAATAAATTTTTTTTTGTACCTAGTACTTTATG-----------------------------ATTTTAATAAA-------------------------------GGATTATAAG-------------------------------CAATATTC-------------------------------------TCCTTCTCTTTGC-------------------------------------TTCTCTTAGTTGATGGCCC-TTTTTTT--CAGCAAGT--------------AAAGC------------------------------------TTGAATAGCCATCACTTGTG-----------------------------ACTAATTTCCATGGCATTTCCTTTCCCTGCAACTGAGACATCATCTCCTTCCATTCATTTGTTCTCAAGGCTGCTT---ACACATGTG--CTCTACAAAATCATCT--AGTCAGATC--------------C-------CAAA--TGAGTTGT----CA--------TAAGAGCCACTGCAGACAGGAGGAAGCACCTC---GGGAA-AC-----------AAGGAGGTGGCTGGCTGTGGGGCAAGTGTAG------------------------ACTGCGCCTGGGACCGTGTGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3459755 771 - 5030052 AAGTCTTAACTACCATGTTCCAGTCTG-TTACACTATA-------------------------CTCCACAAATAAAAAA-CTAATTTGCGATACTGGAAAAAAGACATTCATGTAAAGGATAGATATGTTAGATTTTTTAAATATGCTAAATTAAGTTCTCCTATTACTCCAGTTCACATTGCTATTGTAGATCTACATTTAAATAAAAGTAATCTT-CAAAAAATATTATCCAAGTTGCCTGAAAGCCACCCCTT-AATAATCTGAGCTAATTAATCATTCTGCTTGTTC------------------------ACTCCCAGAAA------TCTCTATTTCAAGACATGTACATTCTAGATGGA---A----TGTATT-AAAAAGACACACAGAAGT--------GAAATACTTTAAGAGCAGGTAAATTTTGATTCCCCAAGCTGACAAGATGTCAGAGACTACGTGATATTTCTATGTATACATTGTCCTGATGAAAATAAAATTTTGTTTGTACCTAGTACTTTATG-----------------------------ATTTTAATAAA-------------------------------GGATTTTAAT-------------------------------CAATATTC-------------------------------------TCCTCCTCTTTGC-------------------------------------TTCTCTTAGTTGATAGCCT-TTTTTTT--CAGCAATT--------------AAAGT------------------------------------TTGAATAGCCATCACTTGTG-----------------------------ACTAATTTCTATGGCATTTCCTTTCCCTGCAACTGAGACATCATCTCCTTCCATTCA-TTGTTCTCAAGGTTGCTT---ACACATGTG--CTCTACAAAATCATCTAGAGTCAGATC--------------C-------CAAA--TGAGTCGT----AA--------TAAGAGCCACTGTAGACAGAAGGAAGCACCTC---GGGAA-AC-----------AAGGAGG----TAGATGTGGAGGAAGTGCAG------------------------ATTGCAACCAGGACCGTGCGCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11292707 997 - 11315646 GCCCCTTAACTCTCGTGCTCTGGTGTGCTTTCACTAAATAAAAATTTCATAAAATGTTTTTATCTTCCCAGATGAAAATATTAATTTGTGAAACTAGAAAAAAATTGTTAATGTAAAGGATAGCTATGTTAGACTTTCTAAATACGCCAACTAAAGCTCTCCTGCTATTCCAATTCACATTGCCATTGTAGAGCTAAATTTAAATAGAAGTCATCTTACAAAAAGTATTAACCAAGTTGCCTAAAGTTCAGCCTTA-AATAATTTGTGCT----GATCCTCCTGCTTGGGC------------------------ACTCATGGAAATTGCTGTTGCTGTTTCAACCCATCTACGTTCTAGATTAA---ATGTGTGTATT-GGAAAGACATGTGGAAGGGCAGAAGAGAAATA-GTTGAAATTCGGGATATTTCACTTCATGACCCAT-CAGACTGT--------ATGTGATATTCCTATGTACGCCCCATTTTGATAAAAATAAAAGTGTACTTACGCCTAGTACTCTGTGGCTTATTTTTGTTTTATTTATTTAtttatatttcaatagatttaggggattcaggtgtcattttgttgcatggattatattgtatagtgataaagtctgcgcttagcatacccaacactcgaatattgtacattgtacccaatggataaatttccatccctcacccTTACCCAATTTGTGATTTTAATTGGAGATCATTAACAATATTTTTCTCAACAGATGCTCC-TGTTTTTAGCTACTGTT---ACTAACCAAAGAAAAT------------------------------------TTGAGTTGTTGTCACCCCTG-----------------------------ACTGATCTCC-TGGTGTTTTTTTCTCCTGGGCCTCAGATGTCATCTCACTCTGCTGATTTTTCTTGAG-GTCGCTG---ACATCAGAG--CCCTGAAGAGAGACCTCAAGTCAGCTCCACTGTGGAAAAGGC-------CACA--TGAGCAGTGGTGAG--------TGAGAGCTG-GGTGGGCGAGAGGAAGCATCTT---GGAAGCAG-----------AAGGAGG----TAAATTTTGAGCAAAAGTAG------------------------ATGGTAACCATGACC-CATATC i otoGar3.GL873580 C 0 I 512 s canFam3.chr16 17009874 798 - 59632846 CAGTCCTAAGTTCTCTGCCCCAGTCTGCTTTTATTAAA-------------------------TTCTACAAATAGAAAT-ATAATTTGCAATACTGAAAAAA-AGCATTAACATAAGGTACAGATATGCTAGATTTTTAAAATA---------AAGTGTTTCTATTATTTCAATTCACATCGCTGTTATAAAGCTATATTTAAATAAAAATAATCTT-CAAA-AATGTTAACAAGGTTACCTAAAGTCCACTCCTTAAATGATCTGAGCT----AATCATTCTGCTTGGCC------------------------AGTCCCTGACA------TCTTAATTTCAAGAAATTTAGGTTCTAGGTGAAGACA----CATATT-GAAAACATATACTGAGGT--------GGAGTGTTTTGAAAGCAGGTGTATTTTACTTCCTCAGCTACATGAAGTATCAGGGATTATGTGATATTTCTACATATACCCTGTCCTGATAGAAATAAAGTCGTATTTTTATCTA-TATATTGTG-----------------------------ATTTTACCAAA-------------------------------GGATCATTAT-------------------------------CCCTATTTG------------------------------------TCTTCCTCTCTAC-------------------------------------TTCTCTCAGCAGAAGGCTC-TTTATTC--TAGCAACTAATACTAATTACAGGAGGG------------------------------------TTGAATCACCCTTACATGTG-----------------------------ATTAATTTCAATGG-GTTTCTTTCTCCTCCCCTTCAGATATCCTCTCCTTTCACTGCATTCTTCTCAAGGCCACTTACAACATCAGTGACACCTACAGAGAATACTAAAACCAAACT--------------CATTATGAAAAA--TAAGTAGT----AG--------GGAGAGCCACTGTAGACAGGAGGAGGCATCTG---GGGAA-ACTCACACCAACAAAAAAGG----TAGAGTGGGAGCAAATGAAG------------------------ATTGCAGCTGTGTCCCCACATC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1517853 722 - 2520184 -agtctgaactactatattCCAGTCTGCTTTCATTAAA-------------------------ATCCTCAAATAAAACT-TTCATTTCTTCTACTGAAAAAA-G---TTAAGATAAAGCATAGCTATATTAGATTTTTT-AATGTACTAAATGAAATTCTCTGACTATTCCAGTTCACATTCCCattataaaattgtatttaaataaaa-taatCTT-CACCAAATTTTATAAGATTT-------------CCTTA-AAAGAGCTAAGCT----AATCAATCTGCTTGTTC------------------------ATTCTCTGAAA-------CTCTATTTCAAGACATTTGCATTCTAGATGAA---A----T---TG--------CACACCGAAAT--------GAAATGCTTCTAAAGAACGCACGTCTCAC-------------TAA--------------------ATTTCTTTATATACCCTGTCCTGAT--AAATGAAGTCTTCTTTCTACGTATTATTTCGTG-----------------------------ATTTTAGTAAG-------------------------------GAATAGTCAT-------------------------------CAATATTT-------------------------------------CCCCC--CTCTGT-------------------------------------TTCTCAGAGCTAATGGCAT-TTTATTC--CAGCAATC--------------------------------------------------------------------ACTTGTG-----------------------------ACCAAGTTCTAGGAAGTCTCTTTCCCTTTCCGCTCAGCGATTATCTCCTTTTCCTGGTTTCTTCTCAAGGTTGCTTGGGGCATCACTG--CTTTACAGGGCCACCTAAAATAAAATC--------------C-------AGGATGGAAGAGGC----AAAGGAAGGGCAGGGGCCTTTGTAAGCAGGCAGCGATGTCTT---GGGGA-AC---------AAAAGATGG----TGGAGTCGGAGTAAATTAGGTTTATTCATCTTCTCCTGCTCAGTACAACAACTAGAACTACATGTG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=1248386.000000 s hg38.chr4_KI270789v1_alt 196247 120 + 205944 CCTTAGGGCAA-TGGAAAGAAGAGGAGATAAATGCTGTAA-GAAGATGATATAGAAAATTTAAAA--A----CTGTTATACACTGTTCAAATCTCATCAAAGGCATCAAA-----GAGGATCCCATTAAAAAC s panTro5.chr4 192981197 120 + 194502333 CCTTAGGGCAA-TGGAAAGAAGAGGAGATAAATGCTGTAA-GAAGATGATATAGAAAATTTAAAA--A----CGGTTATACACTGTTCAAATCTCATCAAAGGCATCAAA-----GAGGATCCCATTAAAAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192865629 120 + 195804263 CCTTAGGGCAA-TGGAAAGAAGAGGAGATAAATGCTGTAA-GAAGATGATATAGAAAATTTAAAA--A----CTGTTATACACTGTTCAAATCTCATCAAAGGCATCAAA-----GAGGATCCCATTAAAAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3897793 120 + 4876863 CCTTAGGGCAA-TGGAAAGAAGAGGAGATAAATGCTGTAA-GAAGATGATATAGAAAATTTAAAA--A----CTGTTATACACTGTGCAAATCTCATCAAAGGCATCAAA-----GAGGATCCCATTAAAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112791604 117 + 115148730 CCTTAGGGCAA-CGGAAAGAAGAGGAGATAAATGCTGT----AAGATTATACAGAAAATTTAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAGGCATCAAA-----GAGGATCCCATTAAAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189061847 119 + 190429646 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGCAT-GCAAATTGTACAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAAAAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188005467 120 + 189454096 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAT-GCAAATTGTACAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAAAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395870 120 - 25927173 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAT-GCAAATTGTACAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAGAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3426464 120 + 4669795 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAC-GCAAATTATACAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAAAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134382569 120 + 135778131 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAC-GCAAATTATACAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAAAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 6514 120 + 1527111 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAC-GCAAATTATACAGAAAACTAAAAA--A----CTGTTATACGCTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATGAAAAAC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 948331 120 + 2368649 CCTTAGGGCAA-GGGAAAGAAGAGGAGATAAATGCTGTAC-GCAAATTAAATAGAAAATTAAAAA--A----CTGTTATACACTGTTTAAATCTCATCAAAAGCATCAAA-----GAGGATCCCATTAAAAAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189687075 119 - 190850796 CCTTAGGGCCA-GGGAAAGAAGAGGCGATAAATACTGTAA-GAAAATTACACAG-AAGTTTAGAA--A----CTGTTAGACACTGTTTAAATCTCATCCATGGCATCAAA-----GAAGATCCCATTAGAAAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13176765 118 - 14256875 CCTTAGGGCCA-GGGAAAGAAG-GGAGATAAATGCCGTAA-GAAAATTACGCAG-AAGTTTAAAA--A----CTGTCATACACTGCTTAAATCTCATCCAAGGCATCAAA-----GAAGATCCCATTAAACAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1071272 118 - 2196201 CCTTAGGGCCA-GGGAAACAAG-GAAGGTAAGTGCTGTAA-GAAAATTACACAG-AAGTTTAAAA--A----CTGTTATACGCTGCTTAAATCTCATCCAAGGCATCAAA-----GAAGATCCCATCAAAAAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3460526 119 - 5030052 CCTTAGGGCCA-GGGAAAGAAGAGGAGATAAATGCTGTAA-GAAAACTACACAG-AAGTTTAAAA--A----CTGTTATACACTGTTTAAATCTCATCCAAGGCATCAAA-----GAAGATCCCATTAAAAAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11294216 117 - 11315646 CCTTAGACCAA-GGAACAGACAAAGTGAGAAATGCTATA----AAAGTATAGAGAAAATGAAAAA--C----CTGTTTTATACCATTTACATCTTTTTGAAAGTGTAAAA-----GATGATCCCGTTAAAAAC i otoGar3.GL873580 I 512 I 1 s canFam3.chr16 17010672 122 - 59632846 CCTTAGGGCAACGGGAAAGATGAAGTAGGAAAGGCTTTAA--AAAATTATACTGAATAATAAAAA--AAAAGCTGTTTAACACTATTTA-ATCCTGTTTAAAGCATAGAA-----GAGTATCAT-TTAAAACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1518575 124 - 2520184 CCTTAAGGCAATGGGAAAGAAGAAGTGA-AAGCACTGTAAAGAAAATCACAC----AATTCAAAACTA----CTACTTTACACTATTAAAATTTGTTTAAAGAAAGAAAAAGAAGGAAGATCCTATTCAAAAC i dasNov3.JH570353 C 0 I 540 e mm10.chr8 86661060 6673 - 129401213 I a score=2157998.000000 s hg38.chr4_KI270789v1_alt 196367 229 + 205944 ACTCTTGAG-A-GCAGCTGAGCGCTGACGCTTTGCTGCTTAGAATGCAGGGCCAAGGGAGATATGAGGTCGGGAGGGTTTAGGTGTGCACCTGAGCATTCAGAGTAAAGAGAAATGAGCACTGGGAAAAGCTAAAag---gaggcagcct--gagggggccagcaggaggccggccggccggccggg-atggcaggcCACCTTCAGCAGG-----TCAGCCTTCACCCTGGCAGGCAGA-TCT s panTro5.chr4 192981317 229 + 194502333 ACTCTTGAG-A-GCAGCTGAGCGCTGACGCTTTGCTGCTTAGAATGCAGGACCAAGGGAGATATGAGGTCGGGAGGGTTTAGGTGTGCACCTGAGCATTCAGAGTAAAGAGAAATGAGCACTGGGAAAAGCTAAAag---gaggcagcct--gagggggccagcaggaggccggccggccggccggg-atggcaggcCACCTTCAGCAGG-----TCAGCCTTCACCCTGGCAGGCAGA-TCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192865749 229 + 195804263 ACTCTTGAG-A-GCAGCTGAGCGCTGACGCTTTGCTGCTTAGAATGCAGGACCAAGGGAGATATGAGGTCGGGAGGGTTTAGGTGTGCACCTGAGCATTCAGAGTAAAGAGAAATGAGCACTGGGAAAAGCTAAAag---gaggcagcct--gagggggccagcaggaggccggccggccggccggg-atggcaggcCACCTTCAGCAGG-----TCAGCCTTCGCCCTGGCAGGCAGA-TCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3897913 229 + 4876863 ACTCTTGAG-A-GCAGCTGAGCGCTGACGCTTTGCTGCTTAGAATGCAGGGCCAAGGGAGATATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAGCATTTAGAGTAAAGAGAAATGAGCACTGGGAAAAGCTAAAag---gaggcagcct--gagggggccagcaggaggccggccggccggccggg-atggcaggcCACCTTCAGCAGG-----TCAGCCTTCACCCTGGCAGGCAGA-TCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112791721 224 + 115148730 TCTCTTGAG-A-GCAGCTGAGTGCTGACGCTTTGCTGCTTAGAATGCAGGGCCAAGGGAGGTATGATGTCGGGAGGGCTTAGGTGTACACCTGAGCGTTCAGAGTAAAGAGAAATGAGCGTTGGGGAAAGCTAAAAG---GAGGCAGCCT--GAGGCAGCCAGCAGGA----GGCCGGCCGGCCGGG-ATGGCA-GCCACCTTCAGCAGG-----TCAGCCTTCACTCTGGTGGGCAGA-TCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189061966 208 + 190429646 -CTCTTGAG-A-GCAGCTGAGTGCTGATGCTTTGCTACTTAGAATGCAGGGCC-AGGGGGAGATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGCCAGCCT--GAGGGAGCCAGCAGGA----GGCCGGCCGTCCGGG-AAGGCAGACCA--------------------CCTTCATCCTGGCGGGCAGA-TCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188005587 209 + 189454096 TCTCTTGAG-A-GCAGCTGAGTGCTGACGCTTTGCTACTTAGAATGCAGGGCC-AGGGGGAGATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGCCAGCCT--GAGGGAGCCAGCAGGA----GGCCGGCCGTCCGGG-AAGGCAGACCA--------------------CCTTCATCCTGGCGGGCAGA-TCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24395990 210 - 25927173 TCTCTTGAG-A-GCAGCTGAGTGCTGACGCTTTGCTACTTAGAATGCAGGGCCAAGGGAGAGATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGCCAGCCT--GAGGGAGCCAGCAGGA----GGCCGGCCGTCCGGG-AAGGCAGACCA--------------------CCTTCATCCTGGCGGGCAGA-TCT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3426584 225 + 4669795 TCTCTTGAG-A-GCAGCTGAGTGCTGACGCTTTGCTACTTAGAATGCAGGGCCAAAGGAGATATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGCCAGCCT--GAGGGAGCCAGCAGGA----GGCCGGCCGTCCGGG-ATGGCAGACCACCTTCAGCAGG-----TCGGCCTTCATCCTGGCGGGCAGA-TCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134382689 225 + 135778131 TCTCTTGAG-A-GCAGCTGAGTGCTGACGCTTTGCTACTTAGAATGCAGGGCCAAGGGAGATATGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGTCAGCCT--GAGGGAGCCAGCAGGA----GGCCGGCCGTCCGGG-ATGGCAGACCACCTTCAGCAGG-----TCGGCCTTCATCCTGGCGGGCAGA-TCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 6634 224 + 1527111 TCTCTTGAG-A-GCAGCTGGGTGCTGGCGCTTTGCTACTTAGAATGCAGGGCCGAGGGAGACACGAGGTTGGGAGGGTTTAGGTGTGCACCTGAACATTCAGAGTAAAGAGAAGTGAGCATTGGGAAAAGCTAAAAG---AAGCCAGCCT--GAGGTAGCCAGCAGGA----GGCCGGCCGTCC-GG-ATCGCAGACCACCTTCAGCAGG-----TCGGCCTTCATCCTGGCGGGCAGA-TCT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 948451 224 + 2368649 TCTCTTGAG-A-GCAGCTGAGCGCTGACGCTTTGCTACTTAGAATGCAGGCCCAAGGGAGATACGAGGTTGGGAGGGGTTAGGTGTGCACCTGAACGTTCAGCGTAAAGAGAAGTGAGCATC-GGAAAAGCTAAAAG---AAGCCAGCCT--GAGGGAGCCAGCAGGA----GGCTGGCCGGCCGGG-ATGGCAGGCCACCGTCAGCAGC-----TCAGCCTTCACCCTGGCGGGCAGA-TCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189687194 209 - 190850796 TCTCTTAGG-A-GCAGCTGAGTGCTGATGCTTTGCTGCTGAGAATGCAGA--------------GCAGT-GGGAGGGTTTAGGTTTGCACCTGAGCATTCAGAGTAAAGAGAAATGAGCATCTGGAAAAGCTAAAAG---GAGACAGCTT--CAGGGAGCCAGCAGGA----GGCCTG-CGGCCGGG-ATGGCAGGCCACCTCCAGCAGG-----TCCGCCTTCACCCTGGCGGGCAGA-TCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13176883 209 - 14256875 TCTTTTAGC-A-GCAGCTGAGTGCTGACGCTTTGCTGCTTAGAATGCAGAGCAGCGGGAGGTATGCAGT-GGGAGGGTTTAGGTTTGCACCTGAGGATTCAGAGGAAAGAAAAATGAGCACTGGGAAAAGCTAAAAG---GAGCCAGCTT--CAGGGAGCCAGCAGGA----GGCCTG-CAGCCGGG-ATG--------------GCAGG-----TTGGCCTTCGCCCTGGCGGGCAGC-CCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1071390 209 - 2196201 TCTCTTAGG-A-GCAGCTGAGTGCTGACGCTTTGCTGCTTAGAATGCCGAACAGTGGGAGATATGCAGT-GGGGGGGTTTGGGTTTGCACCTGAGGATTCAGAGGAAAGAGAAATGAGCACTGGGAAAAGCTAAAAG---GAGCCAGCTT--CAGGGAGTCAGCAGGA----GGCCTG-CGGCCGGG-ATG--------------GCAGG-----TCGGCCTTCATCCTGGCGGGCAGA-TCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3460645 223 - 5030052 TCTCTTAGG-A-GCAGCTGAATGCTGACGCTTTGCTGCTTAGAATGCAGAGCAGTGGGAGATATGAAGT-GGGAGGGTTTAGGTTTGCACTTGAGGATTCAGAGTAAAGAGAAATGAGCATTGGGAAAAGCTAAAAG---GAGACAGCTT--CAGGGAGCCAGCAGGA----GGCCTG-CGGCTGGG-ATGGCAGGCCATCTTCAGCAGG-----TCGGCCTTCACCCTGGCGGGTAGA-TCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11294334 195 - 11315646 TCTCTGGAGAA-GCAGCCGAGCCCTAAAGCTTTGCTACCTAGAATGGACAGCAATGGCAGGCA-GGGCTTGGGAGGGTTTGGGTTTGTACCTGCATGCGCAGAGC--AGAGAAATGAGC--TTGGAGGAGGT------------------------------GCAGGA----GGATGGTGGCCTGGGTAGGGCATGCCAACCCCAGTGGT-----CCAGCTTCCA-CCTGGTGGGCAGC-TC- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 17010794 233 - 59632846 TCTCCTGAG-ACACAGCTGTGTTTTGAAGCTTTGTTACTTAGAAATGGCAACAGTGGAAGATATGGGGTTCGGAGGGTTTGGATTT-CATGTGAGCATTCAGAGTAAAGGGAGCTAAGCACAGGGATAAGGCAAAAGAGAAAGCTAGA----GAGGGAGACAGCTGGA----AGATGGTGGACTTGGCATGCCATGCCAACTTCATCAGGCAGGTTCAGTTGTCACCCTGAAGGGCAGCTTCC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1519239 217 - 2520184 TCCCTTGAGAA-GCAGTTGAGTTTTGAAGCTTTACCACTTAGAATTGATAACAACAGAAAATATGA----------GTTTAGATTTATTCCTGCACGTCCAGAGTAAAGAACCATG-GCACTGGGATAAGTGTAAAG---GGG-CAGCTGGAGAGGAAGAGAGCAGGAA---GGGCAGTGGCTTAGA-ATGCCTTTGCAACACCAGCAGGC----TCAGCACTTATCCTGA-GGGCAGC-TTT i dasNov3.JH570353 I 540 I 413 e mm10.chr8 86661060 6673 - 129401213 I a score=2892934.000000 s hg38.chr4_KI270789v1_alt 196596 290 + 205944 AACGCGGATTT----GGGAAAAAGAGAC--ACT---CTCAGTCCC-----TCCAGATTCTGG-GATGGTTTGGTCTCTGGCTCTGaggttcccagg--tgaaactgatgctgctgCACCTTGCCGTGATGCAGTGTTACTCATGGCCA---AGAGCAG--AACTT-CAG-ATGGGAGAGGGCTGACTCTGGCTT-CT-GCTATTCACAGCCATAGTGTATGGGAAAGTCAAAGAGGCTTCATCATTCAGTAAC-AAAAA-CAAATTTCAGTCA-CGTGAGGAAAACTAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTG--- s panTro5.chr4 192981546 290 + 194502333 AACGCAGATTT----GGGAAAAAGAGAC--ACT---CTCAGTCCC-----TCCAGATTCTGG-GATGGTTTGGTCTCTGGCTCTGaggttcccagg--tgaaactgatgctgctgCACCTTGCCGTGATGCAGTGTTACTCATGGCCA---AGAGCAG--AACTT-CAG-ATGGGAGAGGGCTGACTCTGGCTT-CT-GCTAGTCACAGCCATAGTGTATGGGAAAGTCAAAGAGGCTTCATCATTCAGTAAC-AAAAA-CAAATTTCAGTCA-CGTGAGGAAAACTAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTA--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192865978 290 + 195804263 AACGCAGATTT----GGGAAAAAGAGAC--ACT---CTCAGTCCC-----TCCAGATTCTGG-GATGGTTTGGTCTCTGGCTCTGaggttcccagg--tgaaactgatgctgctgCACCTTGCCGTGATGCAGTGTTACTCATGGCCA---AGAGCAG--AACTT-CAG-ATGGGAGAGGGCTGACTCTGGCTT-CT-GCTAGTCACAGCCATAGTGTATGGGAAAGTCAAAGAGGCTTCATCATTCAGTAAC-AAAAA-CAAATTTCAGTCA-CGTGAGGAAAACTAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTG--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3898142 290 + 4876863 AACGCAGATTT----GGGAAAAAGAGAC--ACT---CTCAGTCCC-----TCCAGATTCTGG-GATGGTTTGGTCTCTGGCTCTGaggttcccagg--tgaaactgatgctgctgCACCCTGCCGTGATGCAGTGTGACTCATGGCCA---AGAGCAG--AACTT-CAG-ATGGGAGAGGGCTGACTCTGGCTT-CT-GCTATTCACAGCCATAGTGTATGGGAAAGTAAAAGAGGCTTCATCATTCAGTAAC-AAAAA-CAAATTTCAGTCA-CGTGAGGAAAATTAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTA--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112791945 290 + 115148730 ACGGCAGATTT----GGGAAAAAGAGAC--ACA---CTCAGTCCC-----TCCAGATTCTGG-GATGGTTTGGTCTCTGGCTCTGaggttcccagg--tgaaactgatgctgctgCACCCTGCCGTGATGCAGTGTGACTCATGGCCA---AGAGCAG--AACTT-CAG-ATGGGAGAGGGCTGACTCTGGCTT-CT-GCTATTCACAGCCACAGTGTATGGGAAAGTAAAAGAGGCTTCATCATTCAGTAAC-AATAA-CAAATTTCAGTCA-CGTAAGGAAAATTAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCTTA--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189062174 290 + 190429646 ACGGCAGACTT----GGGAAAAGGAGAG--ACA---CTCAGTCCC-----TGCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGCTGGCAGG--TGAAACTGATGCTGCTGCACCCTGCCGTGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGACGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-CGTAAAGAAAATCAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCTCCTA--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188005796 290 + 189454096 ACGGCAGACTT----GGGAAAAGGAGAG--ACA---CTCAGTCCC-----TGCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGCTGGCAGG--TGAAACTGATGCTGCTGCACCCTGCCGTGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-CGTAAGGAAAATCAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCTCCTA--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24396200 290 - 25927173 ACGGCAGACTT----GGGAAAAGGAGAG--ACA---CTCAGTCCC-----TGCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGCTGGCAGG--TGAAACTGATGCTGCTGCACCCTGCCGTGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-CGTAAGGAAAATCAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCTCCTA--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3426809 288 + 4669795 AAGGCAGACTT----GGGAAAAGGAGAG--ACA---CTCAGTCCC-----TGCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGCTGGCAGG--TGAAACTGATGCTGCTGCACCCTGCCGTGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-CATAAGGAAAATCAA-AC--AGCT-------------------------TTATGAACTTTCC-T------TTCTCCTA--- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134382914 292 + 135778131 AAGGCAGACTT----GGGAAAAGGAGAGACACA---CTCAGTCCC-----TGCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGTTGGCAGG--TGAAACTGAAGCTGCTGCACCCTGCCGTGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-TGTAAGGAAAATCAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTA--- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 6858 290 + 1527111 ACGGCAGACTT----GGGAAAAGGAGAG--ACA---CTCAGTCCC-----TGCAGATGCTGG-AATGGTTTGGTCTCTGGCTCTGAGGCTGGCAGG--TGAAACTGATGCTGCTGCACCCTGCCGCGATGCGGTGTGACGCATGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCCGGCTT-CT-GCTAGTCACAGCCACGGTGTGTGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-CGTAAGGAAAATCAA-ACTGAGCT-------------------------TTATGAACGTTCC-T------TTCTCCTA--- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 948675 292 + 2368649 AAGGCAGACTT----GGGAAAAGGAGAGACACA---CTCAGTGCC-----TCCAGATTCTGG-AATGGTTTGGTCTCTGGCTCTGAGGTTGGCAGG--TGAAACTGCTGCTGCTGCACCCTGCCGTGATGCGCTGTGACTCAAGGCCA---AGAGCAG--AACTT-CAG-ATAGGAGAGGGCTGACTCTGGCTT-CT-GCTAGTCACAGCCACGGTGTATGGGAAAGTAAAAGAGGCCTCATCATTCTGTAAG-AAAAA-CAAATTTCAGTCA-TGTAAGGAAAATCAA-ACTGAGCT-------------------------TTATGAACTTTCC-T------TTCCCCTA--- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189687403 298 - 190850796 AAGGCGGACTCA--GGGGAAAAAGAGAGTCAGC---CTCAGTCCCAGTCGTCAAGATTCTGC-GATGG-TTGGTCTCTGGCTCTGGGGCTCCCAGG--TGAAACTGATGCTTATGCACCCTGCAGTGAGGCAGTGTGACTCAGGGCCA---AGAGCAG--AACTTCCTG-ATAGGA-GGGGCTGAGTCTGGCTT-CT-CTTATTCAGAGCCACAGTGTGTGGTAAAGTAAAAGAGGCTCCGTCACTCAGTAAG-AAAAA-CACATTTTAGTCA-TGC-AGGAAAGTGAA-AATGAGCT-------------------------TGATCAGCTTTCCTT------TTTCTCTG--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177092 293 - 14256875 AAGGCAGACTCA--GGGGAAAAAGAGGGTCACC---CTCAGTCCC-----TCCAGATTCCGG-GATGG-TTGGTCCCTGGCTCTGAGGCTCCCAGG--TGAAACTGATGCTTATGCACCCTGCAGAGATGCCCTGTGACTCACCGCCA---AGAGCAG--AACTTTCTG-ATGGGAGGGGGCTGAGTCTGGCTT-CC-GTTATTCATAGCCACAGTGTGTGGGAAAGTAAAAGAGGCTCCGTCCTTCAGTAAG-AAAAA-CAAATTTCAGTCA-TGC-AGGAAAATGAA-AGTGAGCT-------------------------TGATCCGCTTTCC-T------TTCCACTA--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1071599 291 - 2196201 AAGGCAGACTCA---GGGAAAAAGAGAGTCACC---CTCAGTCCC-----TCCAGATTCCGG-GATGG-TTGGTCCCTGGCTCTGAGGCT-CCAGG--TGAAACTGATGCTTATGCACCCTGCAGTGATGCACTGTGACTCATGGCCA---ACAGCAG--AACTTTCTG-ATGGGAGGGGGCTGAGTCTGGCTT-CT-GTTATTTATAGCCACAGTGTGTGGGAAACTAAAGGAGGCTCCGTCATTCAATAAG-AAAAA-CAAATTTCAGTCA-TGC-AGGAAAATGAA-AGTGAGCT-------------------------TGATCAGCTTTCC-T------TCCCTCTA--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3460868 282 - 5030052 AAGGCAGACTCA--GGGGAAAAAGAGAGGCACC---CTCAGTCCC-----TCTGGATTCTGG-GATGG-TTGGTCTCTGGCTCTGAGGCTCCCAGG--TAAAACTGATGCTTATGCACCCTGCAGTGGTG--GTGTGACTCATGGCCA---AGAGCAG--AACTTTCTG-AGAGGAGGGGACTGAGTCTGGCTT-CT-GTTATTCATAGCCACAGTGTGTG---------AGGAGGCTCTGTCATTCAGTTAG-AAAAA-CGAATTTCAGTCA-TGC-AGGAAGATGAA-AGTAAGCT-------------------------TGATCAACTTTCC-T------TTCCTCTA--- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11294529 290 - 11315646 -AGGCAGACCCC-TGGGGAGAAGCATGG--ACACAGCTCAGTCCC-----CATAAATT-TGG-GATGTTTCGGTCCCCAGTTCTGAGTTTCTGAGT--TAAAATTAATACCACTGCCCTCTGCTGTGAAGCATTGTGAT-----GCCA---ACAGCAG--AACTTTTAA-AGAGAAGACAGATGAGTTTGGCTT-GTGGCTATTCACAGCCACAGCATATGTAAAAGGAAAAG-GTCTTCATCATCTAGTAAGAAAAAA-CAAATTTTGGTCA-TATAAGGAAAGTTAA-ACT-AGCC-------------------------TTATTAACTTTGT-C------CCTCTATA--- i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17011027 324 - 59632846 AAGGCAGACTACAGGAGGAGAATGAGAC--ACA--GCTCAGTCCC-----TGCAGATTCAGG-GATGACTTGGTCTCCAGCTCTGAGATTCAGAAG--TAAAGCTTGTACTACTGTGCTCTGTATGAATGGATCCTGGCACCTGGCTAACCACAGGAG--AACTA-CTGCATAGGAAGAGACAAGACTTACCCA-GG-GCTGTACATAGCCAAGGTGTACTTGAAAGTAAATCTGTCTTCATAAACCAATAAG-AAAAA--ACATTTCAGTCAGAGTCAGCAAATTACA-ACTAAACTTATATCCTTTTTTATTTTCACATCCTGTTTTATTTTAt-t------tttcttta--- i canFam3.chr16 C 0 I 196 s dasNov3.JH570353 1519869 303 - 2520184 AAGGCAGATTG--TAAAGGAAGGTAGAT--ACA--GCTCAGCCCC-----TACAGATTCGAGTGGCGATTTGCTCTCTGGTTCTGA---TTGCAGGGCTAAAATGAATACTGCTGCACTCTGCTGTGACG---AGTGACACATGGCCA---AGAGTGGACAACTTTTAG-ATAGAAGAGAGATGAGAATGACCCACG-GCTATTAATAGCCAGAGTACCTG--AAAGTAAAAGCGTCTTCATAAACATGTAAG-AAACTTCAAATTTCAGGCA-TGTAGGAAAAATGAATACTGAGCC-------------------------TTATGAATCTTTT-TCTAAAATTTTTTTAACA i dasNov3.JH570353 I 413 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=2714766.000000 s hg38.chr4_KI270789v1_alt 196886 227 + 205944 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATGCAAATATAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACAGCTAGTTTTATATAGATAAAAGCTTTCAAATTTT--------------ATTCAA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCACAGTCCTCCAGTAT s panTro5.chr4 192981836 227 + 194502333 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATGCAAATATAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACAGCTAGTTTTATATAGATAAAAGCTTTCAAATTTT--------------ATTCAA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCACAGTCCTCCAGTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866268 227 + 195804263 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATGCAAATATAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACAGCTAGTTTTATATAGATAAAAGCTTTCAAATTTT--------------ATTCAA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATCATTTAATGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCACAGTCCTCCAGTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3898432 227 + 4876863 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATGCAAATATAGATATGTTTAATGCATATTTACCTTTCTAATTAATAAACAGCTAGTTTTATATAGATAAAAGCCTTCAAATTTT--------------ATTCAA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCACAGTCCTCCAGTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792235 228 + 115148730 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATGCAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACAGCTAGTTTTATATAGATAAAAGCCTTCAAATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCACGAGTCCAAGCATAGTCCTCCAATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189062464 228 + 190429646 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGAGCTGATT---TTCATTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCTGTGAGTCCAAGCATAGTCCTCCAGTGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188006086 228 + 189454096 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGAGCTGATT---TTCATTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCTGTGAGTCCAAGCATAGTCCTCCAGTGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24396490 228 - 25927173 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGAGCTGATT---TTCATTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCTGTGAGTCCAAGCATAGTCCTCCAGTGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3427097 228 + 4669795 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTCTCTCAGAGAGCTGATT---TTCGTTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCCGTGAGTCCAAGCATAGTCCTCCAGTGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134383206 228 + 135778131 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAATTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGAGCTGATT---TTCGTTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCCGTGAGTCCAAGCATAGTCCTCCAGTGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 7148 226 + 1527111 TCTTACTTTG--ATGTCA-TTTTGTCTTCTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAACTAATAAACCGCTAGTTTTACACCGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTC--AGAGCTGATT---TTCGTTGTTCATCAGGCAGGCACATCATTTAGTGGAAACCAAGTGAAATTGTATCCGTGAGTCCAAGCATAGTCCTCCAGTGT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 948967 228 + 2368649 TCTTACTTTG--ATGTCA-TTTTGTCTTGTAATCTAAATGTAGATATGTTTAATCCATATTTACCTTTCTAGTTAATAAACGGCTAGTTTTACACAGATAAAAGCCTTCACATTTTA-------------ATTCAA-----------AGGAGGTTTTCTCAGAGAGCCGATT---TTCGTTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTGAAACTGTATCCGTGAGTCCAAGCATAGTCCTCCAGTGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189687701 225 - 190850796 TCTCACTTTG--ATGGCGTTTTTGTCTTGTCATGCAAATGTAGATGTGCTTAATCCATACTTACCTTTCTAATTAATGAACAGCTATTTTTATGTAGATAAAAGCCTTCACATTTTA-------------ATTTGA--------------AGGTTTTCTCAGAGTGCTGATG---TTCATTGTTCATCAGGCAGGTATATCATTTAGTGGAAAGCCAGTAAAATTGTATCCA-GAGTCCAAGCATGGTCCTCCAACAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177385 228 - 14256875 TCTTACTTTG--ATGGCA-TTTTGTCTTGTAATGCAAATGTAGGTATGTTTAATCCATACCTACCTTCCTAATTAATGAACAGCTATTTTTATGTAGAGAAAAGCCTTCAAATTTTA-------------CTTTGA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TCATTTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCATGGTCCTCCAATAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1071890 226 - 2196201 TCTTACTTTG--ATGGCA-TTTTGTCTTATAATGCAAATGTAGACATATTTAATCCATACTGACCTTTCTAATTAATGAACAGCTATTTTTATATA-ATAAAAGCCTTCAAATTTTA-------------CTTTGA-----------AGGAAGTTTTCTCAGAGTGCTGATT---TCA-TTGTTCATCAGGCAGGTACATCATTTAGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCATGGTCCTCCAGTAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3461150 227 - 5030052 TCTTACTTTG--ATGGCA-TTTTGTCTTGTAATGCAAATATAGACATG-TTAATCCATACTTACCTTTCTAATTAATGAACAGCTATTTTTATATAGATAAAAGCCTTCAAATTTTA-------------ATTTGA-----------AGGAGGTTTTCTCAGAGTGCTGATT---TTCATTGTTCATCAGGCAGGTACATTATTTGGTGGAAACCAAGTAAAATTGTATCCATGAGTCCAAGCATGGTCCTCCAATAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11294819 223 - 11315646 TTTAGTTTTA--ATGTCA-TTTTGTCTTGGAAAGCAAATATAGATATGTTTAATCCACATTTACCTTTATAATTAATAAGCAGCTGGTTTTATA--GGTAAAACACATTGAATTTTA-------------ATTCAA-----------AGGAGGCTTTCTCAGGGGCATCTTTTCCTTCATTGACCATCAGGGACCTGCATTGCTCAGTGGAAACCAAATCAAACTGTAGCCATGAGCCCAGTAATAGTCCTC------ i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17011547 243 - 59632846 TCTTGCTTTAATATATCA-TTTTGTCTTGTAATGGAAATGTGTGTATGTTTAATTCATATTTACCTTTCTATTTAATAAATGGCTATTTTTATATAGGTAAAACACTTTGAGTTTTAATGTACTATGGCGATATAA-----------AGGAGGCTTTCTCAGAGCATTGATT---TTCTTTGTCTATAAAGTAGATACCTCATGTAGTGGAAGTTAAGCCAAATTATAGCCATAAGAACAAGCATGATCCTCCAATAT i canFam3.chr16 I 196 I 23 s dasNov3.JH570353 1520172 235 - 2520184 TCTTGCTTTC--AGGGCA-TTTTGTATTGTAATGCAAATGTAGGTATGTTTAATCTATATTTACCTTTCTAATTAATAAATACCTA-TTTTATATGGGCAAATG-CATCGAATTTTA-------------ATGAACTATGGCTGGCCAGGAACCTTGTTCAGGG-GCAGATT---TTCACTGTCCACCAAACAGATTCATCCCTTAGTGGAAACTAAACG-ACTTGTAGCCACGAGCCCAGTCATGATCCTGCTGTAT i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=2975720.000000 s hg38.chr4_KI270789v1_alt 197113 314 + 205944 TTTGTAGGATTCATCTAAAGACTTAAGTTTAACATTCATGTAATTCCCTCTAGGATGTACAGTTCCTCAGTCTCACAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACACTTCAGGTTTGGGATTCTAATTCATTAAGGAACTGAGGCCTTTTCATGTAGTATTTGTATAAATGCTGAGCTCTCAATATggaagaagaaacaggaaaggaagaaaga-ggggtggggaggaaaaggaataggaggaggagaagaaggaataggaggag s panTro5.chr4 192982063 311 + 194502333 TTTGTAGGATTCATCTAAAGACTTAAATTTAACATTCATGTAATTCCCTCTAGGATGTACAGTTCCTCAGTCTCACAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACACTTCAGGTTTGGGATTCTAATTCATTAAGGAACTGAGGCCTTTTCATGTAGTATTTGTATAAATGCTGAGCTCTCAATATggaagaagaaacaggaaaggaagaaaga-ggggtggggaggaaaaggaataggaggaggagaagaaggaat---aggag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866495 314 + 195804263 TTTGTAGGATTCATCTAAAGACTTAAATTTAACATTCATGTAATTCCCTCTAGGATGTACAGTTCCTCAGTCTCACAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACACTTCAGGTTTGGGATTCTAATTCATTAAGGAACTGAGGCCTTTTCATGTAGTATTTGTATAAATGCTGAGCTCTCAATATggaagaagaaacaggaaaggaagaaaga-ggggtggggaggaaaaggaataggaggaggagaagaaggaataggaggag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3898659 313 + 4876863 TTTGTAGGATTCATCTAAAGACTTAAATTTAACATTCGTGTAATTCCCTCTAGGATGTACAGTTCCTCAGTCTCACAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACACTTCAGCTTTGGGATTCTAATTCATTAAGGAACTGAGGCCTTTTCATGTAGTATTTGTATAAATGCTGAGCTCTCAATATggaagaagaaacaggaaaggaagaaaga-ggggt-gggaggaaaaggaataggaggaggagaagaaggaataggaggag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792463 313 + 115148730 TTTGTAGGATTCATCTAAAGACTTAAATTTGACATTCATGTAATTCCCTCTAGGATATACAGTTCCTCAGTCTCGTGGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CAGCCTGTAGTTCCTTCATCCAAATCCCA-TTACTCT--AGGTTTGGGGTTCTAATTCATTAAGGAACCGAGGCCTTTTCAGGTAGTATTTGTATAAATGCTGAGCTCTCAATATggaagaagaaacagcaaaggaagaaagagggggtgaggaggaaaaggaataggaggaggaggagaaggaataggaggaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189062692 313 + 190429646 TTTCTAGGATTCATCTAAAGACTTAAATTTAACATTAATGCAATTCCCTCTAGGATATACAGTTCCTCAATCTCGCAGAATTAGTCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATTCATTAAGGAACCTAGG-CTTTTCGTATAGTATTTGTATAAACGCTGAGGTCTCAATATGgaag-aaaaacaggaaaagaagaaacagggggtggggaggaaaaggaataggaggaggagaagaaggattaggaggaa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188006314 314 + 189454096 TTTCTAGGATTCATCTAAAGACTTAAATTTAACATTAATGCAATTCCCTCTAGGATATACAGTTCCTCAATCTCGCAGAATTAGTCCAGTACCTGC-------TCTT------CTGGGTGCCAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATTCATTAAGGAACCTAGG-CTTTTCGTATAGTATTTGTATAAACGCTGAGGTCTCAATATGGAAGAAAAAACAGGAAAAGAAGAAACAGGGGGTGGGGaggaaaaggaataggaggacgagaagaaggattaggaggaa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24396718 314 - 25927173 TTTCTAGGATTCATCTAAAGACTTAAATTTAACATTAATGCAATTCCCTCTAGGATATACAGTTCCTCAATCTCGCAGAATTAGTCCAGTACCTGC-------TCTT------CTGGGTGCCAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATTCATTAAGGAACCTAGG-CTTTTCGTATAGTATTTGTATAAACGCTGAGGTCTCAATATGGAAGAAAAAACAGGAAAAGAAGAAACAGGGGGTGGGGaggaaaaggaataggaggaggagaagaaggattaggaggaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3427325 314 + 4669795 TTTCTAGGATTCATCTAAAGACTTAAATTTAACATTAATGCAATTCCCTCTAGGATATACAGTTCCTCAATCTCGCAGAATTAGTCCAGTCCCTGC-------TCTT------CCGGGTGCCAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TGACTCTTCAGGTTTGGGATTCTAATTCATTAAGGAACCTAGG-CTTTTCGTATAGTATTTGTATAAACGCTGAGGTCTCAATACGgaagaagaaacaggaaaagaagaaacagggggtggggaggaaaaggaataggaggaggagaagaaggattaggaggaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134383434 290 + 135778131 TTTCTAGGATTCATCTAAAGACTTAAATTTAACATTAACGCAATTCCCTCTAGGATATACAGTTCCTCAATCTCGCAGAATTAGTCCAGTACCTGC-------TCTT------CTGGGTGCCAGGATGCCATAGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGAACTCTAAT-------------------------TATAGTATTTGTATAAACGCTGAGGTCTCAATATGgaagaagaaacaggaaaagaagaaacagggggtggggaggaaaaggaacaggaggaggagaagaaggattaggaggaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 7374 314 + 1527111 TTTCTAGGATTCATCTAAAGACTTACATTTAACATTAATGCAATTCCCTCTAGGATATACAGTTCCTCGATCTCGCAGAATTAGTCCAGTACCTGC-------TCCT------CTGGGTGCCAGGATGCCATAGA---CACCCTGCAGTTCCTTTATCCAAATCCCA-TGACTCTTCAGGTTTGGGATTCTAATTCATTAAGGAACCCAGG-CTTTTCGTATAGTATTTGTATAAACGCTGAGGTCTCAATATGgaagaagaaacaggaaaagaagaaacagggggtggggaggaaaaggaataggaggaggagaagaaggattaggaggaa i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949195 314 + 2368649 TTTCTACGATTCATCTAAAGACTGAAATTTGACATTAATGCAATTCCCTCTAGGATATACAGTCCCTCCATCTCGCAGAATTAGTCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCACCGA---CACCCTGTAGTTCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATCCATTAAGGAACCTAGG-CTTTTCATGTAGTATTTGTATAAACGCTGAGCTCTCAATATGgaagaagaaacaggaaaggaagaaagaagaggtggggaggaaaaggaataggaggaggagaagaaggattaggaggaa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189687926 273 - 190850796 TTTGGAGGATTCATCTAAAGACTTAAATTTGCCATTCATGTAAT----------------------TCAGTCTCACAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCACAGG---CA-CCTGTCGTCCCTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATTCACT-AGGAACTGAGGCCTTTCCATGTAGTATTTGTATGAATGTTGAGCTCTCAATATGGAAGAAGGAACAGGAAAGGAAGAAagaaggagtggggaggaagaggag------------------gaataggagtag i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177613 315 - 14256875 TTTGGAGGACTCATTTAAAGACTTAAATTTAACATTCATGTAATTCTTTCTGGGATATGCAGTTCCTCAGCCTCACAGAATTAGCCCAGCACCTGC-------TCTT------CTGGGTGTCAGGATGCCACAGGCACCA-CCTGTCACTCTTTTATCCAAATCCCA-TTACTCTTCAGGTTTGGGATTCTAATTCACC-AGGAACCGAGGCCTTTTCATGTAGTATTTGTATAAATGTTGAGCTCTGAATATGGAAG-AGAAATAGTAAAGGAAGAAAGAGGGAGTGGAGTggaaaaggagtaggaggagaagaaggaagaataggaggag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072116 274 - 2196201 TTTGGAGGATTCATTTAAAGACTTAAATTTAACATTCATGTAATTCTCTCTGGGATATGCAGTTCCTCAGTCTCATAGAATTAGCCCAGTGCCTGC-------TCTT------CTGGGTGCCAGGATGCCACAGG---CA-CCTGTAGTTCCTTTAGCCAAATCCCA-GTACTCTTCAGGTTTGGGATTCTAATTCACC-AGGAACCAAGGCCTTTCCATGTAGTATTTGTATGAATGTTGAGCTCTCAATATggaagaagaaacagggaa---------------------ggaaaaggag------------------gaatgggaggag i cebCap1.NW_016107886v1 C 0 I 38 s aotNan1.NW_018492112v1 3461377 308 - 5030052 TTTGGAGGATTCATCGAAAGACTTAAATTTAACATTCATGTAATTCTCTCTAGGATATGCAGTTCCTCAGTCTCAGAGAATTAGCCCAGTACCTGC-------TCTT------CTGGGTGCTAGGATGCCATAGG---CA-CCTGGAGTTCCTTTATCCAAATCCCATTTACTCTTCAGGTTTGGGATTCTAATTCACT-AGGAACCAAGGCCTTTTCATGTAGTATTTGTATGAATGTTGAGCTCTCAATATGGAAGAAGAAACAGGAAAGGAATAAAGAGggagtggggaggaataggag------gagaaaaaggaggaataggaggag i aotNan1.NW_018492112v1 C 0 I 3 s otoGar3.GL873580 11295042 248 - 11315646 -----------TGTCCACAGACTTACACCCAATATTCATACAATTTCCTCCAGGACATACCGTTCCTCTGCCTCATAGAATTGATCCACTAACTGCTAATTGTTCTT------CTAGG-GCCCGGGTACCACAGA---TC-CCTACAGTCCCTTTATTCAAACTCCA-TTACTTCTCAGGGTGGAAATCCTAGTTCACTCTGGGACCAGGGCCTTTGCATGTAGTATCTGTACAAATTCTAAGCTCTCAGTATGGAAG--------------------------------------------------GAGGAGAGGAAGG----------- i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1520407 247 - 2520184 -TCGTAGGATTTGTTGAAGGAATTAAACCCAATGGTCACATAATTTCCTCTAGGGAATGCAGTACTTCAGCTCCAAAGAGTTAGCCCAAGCCCTGT-------CTTTACAGCCTCAGGTACTCGAGTGTCACAGC---CTCACTCGGTTTCCTCTATGCGGGTGCCA-TTACTCTTCAGATTTGAAATTCCGTGCTGCTATGGGACCTGGACCTTTAAATGCCGTATTTATACAAATGTTGAGGTCTCAATATGAGAAA------------------------------------------------------------------------- i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I a score=164108.000000 s hg38.chr4_KI270789v1_alt 197427 31 + 205944 gatgagaattaggaggaataggaac-gggggg s panTro5.chr4 192982374 32 + 194502333 gatgagaattaggaggaataggaatggggggg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866809 31 + 195804263 gatgagaattaggaggaataggaat-gggggg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3898972 29 + 4876863 gatgagaattaggaggaataggacc-gggg-- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792776 30 + 115148730 gacgagaattagaaggaataggaac-ggcgg- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063005 31 + 190429646 gaggagaattaggaggagaagaatt-aggagg i rheMac8.chr5 C 0 I 10 s macFas5.chr5 188006628 31 + 189454096 gaggagaattaggagcagaagaatt-aggagg i macFas5.chr5 C 0 I 12 s macNem1.NW_012013133v1 24397032 31 - 25927173 gaggagaattaggaggagaagaatt-aggagg i macNem1.NW_012013133v1 C 0 I 10 s cerAty1.NW_012001672v1 3427639 31 + 4669795 gaggagaattaggaggagaagaatt-aggagg i cerAty1.NW_012001672v1 C 0 I 10 s chlSab2.chr7 134383724 28 + 135778131 gaggagaatt---aggagaagaatt-aggagg i chlSab2.chr7 C 0 I 12 s manLeu1.NW_012107108v1 7688 31 + 1527111 gaggagaattaggaggagaagaatt-aggagg i manLeu1.NW_012107108v1 C 0 I 10 s colAng1.NW_012116221v1 949509 31 + 2368649 gaggagagttaggaggagaagaatt-aggagg i colAng1.NW_012116221v1 C 0 I 3 s calJac3.chr3 189688199 31 - 190850796 gaggagggttcggaggaagagggac-aggagg i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177928 31 - 14256875 gaggagagtttggaggaagagggac-aggagg i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3461688 31 - 5030052 gaggagagtttggaggaagagggac-aggagg i aotNan1.NW_018492112v1 I 3 C 0 s dasNov3.JH570353 1520654 9 - 2520184 AATGAAAAT----------------------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1072390 38 - 2196201 I e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295290 0 - 11315646 C a score=48.000000 s hg38.chr4_KI270789v1_alt 197458 6 + 205944 cggggc s panTro5.chr4 192982406 6 + 194502333 cggggc i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866840 6 + 195804263 cggggc i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899001 5 + 4876863 -agggc i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792806 5 + 115148730 -ggggc i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 949543 6 + 2368649 aggaac i colAng1.NW_012116221v1 I 3 I 1 s calJac3.chr3 189688230 1 - 190850796 -----T i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177959 1 - 14256875 -----t i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3461719 1 - 5030052 -----t i aotNan1.NW_018492112v1 C 0 C 0 e cebCap1.NW_016107886v1 1072390 38 - 2196201 I e dasNov3.JH570353 1520663 0 - 2520184 C e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e manLeu1.NW_012107108v1 7719 10 + 1527111 I e chlSab2.chr7 134383752 12 + 135778131 I e cerAty1.NW_012001672v1 3427670 10 + 4669795 I e macNem1.NW_012013133v1 24397063 10 - 25927173 I e macFas5.chr5 188006659 12 + 189454096 I e rheMac8.chr5 189063036 10 + 190429646 I e otoGar3.GL873580 11295290 0 - 11315646 C a score=127610.000000 s hg38.chr4_KI270789v1_alt 197464 24 + 205944 gaggaataggaggaggattaggaa s panTro5.chr4 192982412 24 + 194502333 ggggaataggaggaggattaggaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866846 24 + 195804263 ggggaataggaggaggattaggaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899006 24 + 4876863 ggggaataggaggaggattcggaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792811 24 + 115148730 ggggaataggaggaggattaggaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063046 24 + 190429646 ggggaataggagaaggattaggaa i rheMac8.chr5 I 10 C 0 s macFas5.chr5 188006671 22 + 189454096 --ggaataggagaaggattaggaa i macFas5.chr5 I 12 C 0 s macNem1.NW_012013133v1 24397073 24 - 25927173 ggggaataggagaaggattaggaa i macNem1.NW_012013133v1 I 10 C 0 s cerAty1.NW_012001672v1 3427680 24 + 4669795 ggggaataggagaaggattaggaa i cerAty1.NW_012001672v1 I 10 C 0 s chlSab2.chr7 134383764 22 + 135778131 --ggaataggagaaggattaggaa i chlSab2.chr7 I 12 C 0 s manLeu1.NW_012107108v1 7729 24 + 1527111 ggggaataggagaaggattaggaa i manLeu1.NW_012107108v1 I 10 C 0 s colAng1.NW_012116221v1 949550 24 + 2368649 agggaataggagaaggattaggaa i colAng1.NW_012116221v1 I 1 C 0 s calJac3.chr3 189688231 6 - 190850796 ---AAAC---AG------------ i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13177960 9 - 14256875 ---aaacaggag------------ i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3461720 20 - 5030052 ---aaataggaggagga-caggag i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295290 12 - 11315646 -------AGGAGGAGGATC----- i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1072390 38 - 2196201 I e dasNov3.JH570353 1520663 0 - 2520184 C e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I a score=2433719.000000 s hg38.chr4_KI270789v1_alt 197488 247 + 205944 gaggaggaAATTTGCATATGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCTCATGATCCCGTGACATAGGAGCTATTTCCTCTCATCACTACTGATTGTCCTCCATGTTCCCTTTGACTTATCTTTCATGGCCACATGACCCCATCCCCACCCTCTAAATCCAATCCAGTGGACCTCCACACTCTGCTGCCCAGCCCTCTTGGTGATTTCTGAGCTCTTTTGCT s panTro5.chr4 192982436 247 + 194502333 gaggaggaAATTTGCATATGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCTCATGATCCCGTGACATAGGAGCTATTTCCTCTCATCACTACTGATTGTCCTCCATGTTCCCTTTGACTTATCTTTCATGGCCGCATGACCCCATCCCCATCCTCTAAATCCAATCCGGTGGACCTCCACACTCTGCTGCCCAGCCCTCTTGGTGATTTCTGAGCTCTTTTGCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192866870 247 + 195804263 gaggaggaAATTTGCATATGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCTCATGATCCCGTGACATAGGAGCTATTTCCTCTCATCACTACTGATTGTCCTCCATGTTCCCTTTGACTTATCTTTCATGGCCACATGACCCCATCCCCATCCTCTAAATCCAATCCGGTGGACCTCCACACTCTGCTGCCCAGCCCTCTTGGTGATTTCTGAGCTCTTTTGCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899030 247 + 4876863 gaggaggaAATTTGCATATGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACACCATCTCATGATCCCGTGACATAGGAGCTATTTCCTCTCATCACTACTGATTGTCCTCCATGTTCCCTTTGACTTATCTTTCATGGCCACATGACCCCATCCCCATCCTCTAAATCCAATCCAGTGGACCTCCACACTCTGCTGCCCAGCCCTCTTGGTGATTTCTGAGCTCTTTTGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112792835 247 + 115148730 gaggaggaAATTTGCATAGGACTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCTCATGATCCCGTGACATAGGAGCTATTCCCTCTAATCACTACTGATTGTCCTACATGTTCCCTTTGACTTACCTTTCATGGCCTCATGACCCCATCCCCATCCTCTAAATCCAATCCAGTGGACCTCCACACTCTGCTGCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063070 246 + 190429646 gaggaggaaATTTGCATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCGTGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTCCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACACCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188006693 246 + 189454096 gaggaGGAAATTTACATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCGTGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTCCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACACCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24397097 246 - 25927173 gaggagGAAATTTGCATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCGTGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTCCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACACCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i macNem1.NW_012013133v1 C 0 I 305 s cerAty1.NW_012001672v1 3427704 246 + 4669795 gaggagGAAATTTGCATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCGTGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTCCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACACCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTTCT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134383786 246 + 135778131 gaggaggaaATTTGCATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCGTGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTTCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACCCCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 7753 246 + 1527111 gaggagGAAATTTGCATGTGGCTTTAAGTCCCTTAAGCTTCTGGTTAAGTGGCTCATCTACACAAACCCCATCCCATGATCCCATGACATAGGAGGTATTTCCTGTAATCACTACTGATTGTCCTCCTTGTTCCCTGTGACTTATTGTTCATGGCCTCATGACACCATCCCCATCCTCTAAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCCTCTTTGTGATTTCTGAGCTCTTTTGCT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949574 243 + 2368649 gaggaggaaATTTGCATACGACTTTAAGTCCCTGAAGCTTCTGGTTAAGTGGCTCATCTACGCAAACCCCATCCCATGACCCTGTGACAT---AGGTATTTCCTCTAATCACTACTGATTGTCCTCCTCATTCCCTGTGACTTACCGTTCATGGCCTCATGACCCCATCCCCATCCTCTCAACCCAATCCAGTGGACCTGCACACTCAGC-GCCCAGCCGTCTTTGTGATTTCTGAGCTCTTCTGCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189688237 246 - 190850796 GGGGAGGAAACTTGCATATGGCTTTAGGTCCCTTCAGCTTCTTG-TGATCGCTTCATGTACAGAAACGCCATCACAGGATCCCGTGACATGGGAGCTATTTCTGCTAATCACCCCCTACTGTCCTTCATGTTCCCTTTGACTTGCCTTTCACGGCCTCATGACCCTGTCTCCATCCTCTAAATCCAGTCCAGTGACCCTCCACTCTATGCTGTCCAGCCCTTTCTGTGATTTCTGAGCTCTTTTGCT i calJac3.chr3 C 0 I 1 s saiBol1.JH378165 13177969 246 - 14256875 gaggaggaAACCTGCATATGGCTTTAGGTCCCTTAAGCTTCTGGTTAATCGGTTCATCTACAGAAATGCTGTCACACGATCCCAGGACATGGGAGCTATTCCTGCTGATCACTACCGATTGACCTTCATGTTCCCTTTGACTTGCCTTTCATGGCCTCATGACCCCATCTCCGTCCTCTAAATCCAATCCAGTGGCCCTCCAA-CTCTGCTGCCCAGCCCTTTCTGTGACTTCTGAGCTCTTTGGCT i saiBol1.JH378165 C 0 I 1 s cebCap1.NW_016107886v1 1072428 245 - 2196201 gaggaggaAACTTGCATATGGCTTTAGGTCCCTTAAGCTTCTGGTTAATCGGTTCATCTACAGAGATGCCGTCACTCGATCCCAGGACGTGGGATCTATTCCTGCTGATCACTACCGATTGACCTTCATGTTCCCTTTGACTTGCCTTTCATGGCCTCATGACCCCATCTCCAGCCTCTAAATCCAATCCAGTGGCCCCGCA--CTCTGCTGCCCAGCCCTTTCTGTGACTTCTGAGCTCGTTGGCT i cebCap1.NW_016107886v1 I 38 I 1 s aotNan1.NW_018492112v1 3461740 247 - 5030052 gaggaggaAACTTGCATATGGCTTTAGGTCCCTTAAGCTTCTGGTTAATCGGTTCATCTACAGAAATGCCATCACCTGATCCCATGACCTGGGAGCTATTTCTGCTAATCACGACCGACTGTCCTTCATGTTCCCTTTGACTTGCCTTTCATGGCCTCATGACCCCATCTCTATCCTCTAAATCCAATCCAGTGGCCCTCCACTCTCTGCTGCCCAGCCCTTTCTGTGATTTCTGAGCTCTTTTGCT i aotNan1.NW_018492112v1 C 0 I 1 s otoGar3.GL873580 11295302 214 - 11315646 ----AGGAGATCTGCATATGGATTTAGGTCCTTTGAACTTCTATTT-ATTGCCACATTCCCACCTCCCTCATCTCCTGAGCCCATAGTATGAGAGATA---------ATCCCTACCATTTGTCCTGCATGT----------------TTCATGGCCTCATTACTCCATCCCCACCC-CTCAGTGCATTCCAGTGGGCCTCCTGGCTCTGCTGCCTAGCCCTCT--GGGACTGGTGAGCTCATTCACT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1520663 197 - 2520184 ---------ACTTGCATATGCATTTAGGTC--GTGAGCCGCTGGCTCATTGCCCCA---------GCCTCGCCCC-----------------------TTCCCTCTTACCAGCACCCGC-GCCCCACATGCTCCCCTCATCTAGCC--TGACGACCTCA--GCCCCCTCCCC-TCCTCTAAACCGAATCCAGGGGACC-CCACCCTCTGCTGAGAAACCTTCTTCGTAATTCCTGAGCACTGATTCT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I a score=7800.000000 s hg38.chr4_KI270789v1_alt 197735 1 + 205944 G s panTro5.chr4 192982683 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867117 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899277 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793082 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063316 1 + 190429646 G i rheMac8.chr5 C 0 I 304 s macFas5.chr5 188006939 1 + 189454096 G i macFas5.chr5 C 0 I 267 s cerAty1.NW_012001672v1 3427950 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384032 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 7999 1 + 1527111 G i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949817 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11295516 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1520860 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e calJac3.chr3 189688483 1 - 190850796 I e cebCap1.NW_016107886v1 1072673 1 - 2196201 I e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e aotNan1.NW_018492112v1 3461987 1 - 5030052 I e saiBol1.JH378165 13178215 1 - 14256875 I e macNem1.NW_012013133v1 24397343 305 - 25927173 I a score=3455.000000 s hg38.chr4_KI270789v1_alt 197736 1 + 205944 T s panTro5.chr4 192982684 1 + 194502333 T i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867118 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899278 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793083 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3427951 1 + 4669795 T i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384033 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8000 1 + 1527111 T i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949818 1 + 2368649 T i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189688484 1 - 190850796 C i calJac3.chr3 I 1 C 0 s saiBol1.JH378165 13178216 1 - 14256875 C i saiBol1.JH378165 I 1 C 0 s cebCap1.NW_016107886v1 1072674 1 - 2196201 C i cebCap1.NW_016107886v1 I 1 C 0 s aotNan1.NW_018492112v1 3461988 1 - 5030052 C i aotNan1.NW_018492112v1 I 1 C 0 s dasNov3.JH570353 1520861 1 - 2520184 T i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e macNem1.NW_012013133v1 24397343 305 - 25927173 I e macFas5.chr5 188006940 267 + 189454096 I e rheMac8.chr5 189063317 304 + 190429646 I e otoGar3.GL873580 11295517 0 - 11315646 C a score=211336.000000 s hg38.chr4_KI270789v1_alt 197737 42 + 205944 AAACA--CAAGTGGACAG-TCATCTGAGGCAGCGTTCTTTACTAT s panTro5.chr4 192982685 42 + 194502333 AGACA--CAAGTGGACAG-TCATCTGAGGCAGCGTTCTTTACTAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867119 42 + 195804263 AGACA--CAAGTGGACAG-TCATCTGAGGCAGCGTTCTTTACTAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899279 42 + 4876863 AGACA--CAAGTGGACAG-TCATCTGAGGCAGCGTTCCTTACTAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793084 42 + 115148730 AGACA--CAAGTGGACAG-TCATCCGAGGCAGCGTTCTTTACTAT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188007207 37 + 189454096 AATTA--AAAGTGGACAG-TCATCCGAGGCAGAGTTCCTT----- i macFas5.chr5 I 267 C 0 s cerAty1.NW_012001672v1 3427952 37 + 4669795 GGACG--GAAGTGGACAG-TCATCCGAGGCAGAGTTCCTT----- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384034 37 + 135778131 GGACG--GAAGTGGACAG-TCATCCGAGGCAGAGTTCCTT----- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8001 37 + 1527111 GGACG--GAAGTGGACAG-TCATCCGAGGCAGAGTTCCTT----- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949819 42 + 2368649 GGACA--GCAGTGGACAG-TCATCCGAGGCAGAGTTCTTTACTAT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189688485 42 - 190850796 AGATG--CAAGCGGACAG-TTATCAGAGGCAGTGTTCTCTGCCAT i calJac3.chr3 C 0 I 762 s saiBol1.JH378165 13178217 42 - 14256875 AGACG--CAAGTGAACAG-TTATCAAAGGCAGCGTTCTCCACCAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072675 42 - 2196201 AGATG--CAAGTGGACGG-CTATCAAAGGCAGTGTTCTCTACCAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3461989 44 - 5030052 AGACGTCCAAGTGGACAG-TTATCAAAGGCAGTGTTCTCTACCAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295517 42 - 11315646 -AGGA--TCAATGGACATCCCATCAGAAGCCACGCACTTTAGCAT i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1520862 26 - 2520184 -GGGG--CCGGCAGGAGG-CTCTCACACAC--------------- i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e macNem1.NW_012013133v1 24397343 305 - 25927173 I e rheMac8.chr5 189063317 304 + 190429646 I a score=42163.000000 s hg38.chr4_KI270789v1_alt 197779 10 + 205944 CTGCACTCTC s panTro5.chr4 192982727 10 + 194502333 CTGCACTCTC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867161 10 + 195804263 CTGCACTCTC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899321 10 + 4876863 CTGCACTCTC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793126 10 + 115148730 CTGCGCTCTC i nomLeu3.chr7b C 0 C 0 s colAng1.NW_012116221v1 949861 10 + 2368649 CTGGACTCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689289 10 - 190850796 CTGGACTCCC i calJac3.chr3 I 762 C 0 s saiBol1.JH378165 13178259 10 - 14256875 CTGCACTCCC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072717 10 - 2196201 CTGCACCCCC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462033 10 - 5030052 CTGGACTCTC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295559 10 - 11315646 CAGGATTCTC i otoGar3.GL873580 C 0 C 0 s dasNov3.JH570353 1520888 10 - 2520184 CCAGATTCTC i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e manLeu1.NW_012107108v1 8038 0 + 1527111 C e chlSab2.chr7 134384071 0 + 135778131 C e cerAty1.NW_012001672v1 3427989 0 + 4669795 C e macNem1.NW_012013133v1 24397343 305 - 25927173 I e macFas5.chr5 188007244 0 + 189454096 C e rheMac8.chr5 189063317 304 + 190429646 I a score=107220.000000 s hg38.chr4_KI270789v1_alt 197789 11 + 205944 CAGAGCACAGT s panTro5.chr4 192982737 11 + 194502333 CAGAACACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867171 11 + 195804263 CAGAACACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899331 11 + 4876863 CAGAGCACAGT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793136 11 + 115148730 CAGAGCACAGT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063621 11 + 190429646 CAGAGCATGGT i rheMac8.chr5 I 304 C 0 s macFas5.chr5 188007244 11 + 189454096 CAGAGCATGGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24397648 11 - 25927173 CAGAGCATGGT i macNem1.NW_012013133v1 I 305 C 0 s cerAty1.NW_012001672v1 3427989 11 + 4669795 CACAGCATGGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384071 11 + 135778131 CAGAGCATGGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8038 11 + 1527111 CAGAGCATGGT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949871 11 + 2368649 CAGAGCATGGT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689299 11 - 190850796 CAGAGCACGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13178269 11 - 14256875 CAGAGCACGGC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072727 11 - 2196201 CACAGCACAGC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462043 11 - 5030052 CAGAGCACAGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295569 11 - 11315646 CAGAGCTCAGT i otoGar3.GL873580 C 0 I 6 s dasNov3.JH570353 1520898 11 - 2520184 CCGAGTTCGCT i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I a score=796741.000000 s hg38.chr4_KI270789v1_alt 197800 88 + 205944 TGAGCCTGAGTTCCACCCCAGCACATCTCAACCTCAGTTGATTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC s panTro5.chr4 192982748 88 + 194502333 TGAGCCTGAGTTCCACCCCAGCACATCTCAACCTCAGTTGATTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867182 88 + 195804263 TGAGCCTGAGTTCCACCCCAGCACATCTCAACCTCAGTTGATTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899342 88 + 4876863 TGAGCCTGAGTTCCACCCCAGCACTTCTCAACCTCGATTGATTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793147 88 + 115148730 TGAGCCTGAGTTCCACCCCAGCACATCTCAACTTCAATTGATTTCAGAACCTTTCAGTCATTTGTGTGACATTTCTGAATTTCCTGAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063632 88 + 190429646 TGAGCCTGAGTTCCACCCCGGCACATCTCAACCTCAATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188007255 88 + 189454096 TGAGCCTGAGTTCCACCCCGGCACATCTCAACCTCAATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24397659 88 - 25927173 TGAGCCTGAGTTCCACCCCGGCACATCTCAACCTCAATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3428000 88 + 4669795 TGAGCCTGAGCTCCACCCCGGCACATCTCAACCTCAATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384082 88 + 135778131 TGAGCCTGAGTTCCACCCCGGCACATCTCAACCTCAATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTAAC i chlSab2.chr7 C 0 I 7 s manLeu1.NW_012107108v1 8049 88 + 1527111 TGAGCCTGAGTTCCACCCCGGCACATCTCAACCTCAATTGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCTGAC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949882 88 + 2368649 TGAGCCTGAGTCCCACCCCGGCACATCTCAGCCTCCATCGACTTCAGAACCTTTCAATCATTTCTGTGACATTTCTGAATTTCCAGAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689310 88 - 190850796 CGAGCCTGACTTCCACCCCAGCACATCTCAACCTCAGCTGGTTTCAGCACCTGTCAATCACTTACGTGACACTTCCGAATTTCCTGAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13178280 62 - 14256875 TGAGCCTGACTTCCACCC--------------------------CAGCACCTTTCAATCACTTATGCGCCACTTCTGAATTTCCCGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072738 62 - 2196201 TGAGCCTGACTTCCACCC--------------------------CAGAACCTTTCAGTCACGTATGTGACACTTCTGAATTTCCTGAC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462054 88 - 5030052 TGAGCCTGACTTCCACCCCAGCACATCTCAACCTCAATTGGTTTCAGCACCTTTCAATCACTTACGTGACCCTTCTGAATTTCCTGAC i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1520909 84 - 2520184 CAGGCCAGGGCTCCGCTCCTCCCCACCTCATCACCAGCGGATT--AGAGCCTCTCC-TCGCTCACTTGACAC-CCTGCAGCTCCTTCC i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=44279.000000 s hg38.chr4_KI270789v1_alt 197888 9 + 205944 TTCACCAAT--- s panTro5.chr4 192982836 9 + 194502333 TTCACCAAT--- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867270 9 + 195804263 TTCACCAAT--- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899430 9 + 4876863 TTCACCAAT--- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793235 9 + 115148730 TTCACCAAT--- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063720 9 + 190429646 TGCACCAGG--- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188007343 9 + 189454096 TGCACCAGG--- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24397747 9 - 25927173 TGCACCAGG--- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3428088 9 + 4669795 TGCACCAGG--- i cerAty1.NW_012001672v1 C 0 C 0 s manLeu1.NW_012107108v1 8137 8 + 1527111 TGCGCCAG---- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949970 8 + 2368649 TGCACCAG---- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689398 9 - 190850796 TTCACCAAT--- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13178342 9 - 14256875 TTCACCAAT--- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072800 9 - 2196201 TTCACCAGT--- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462142 9 - 5030052 TTCACCAAT--- i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1520993 9 - 2520184 ---ATCAGTGAC i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e chlSab2.chr7 134384170 7 + 135778131 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=5210278.000000 s hg38.chr4_KI270789v1_alt 197897 545 + 205944 GCCAGGAGGATAACCCTCCGAATCAAA-TCGAAGATCATTTCATTGTAAAGTTCCTCCTATATTGACATTTCTGGGGAACTATGACAAACTCAAGGC-------CTCGGAGGGCCCTAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAATAACTTGGGCACCATTTATGTCAACATAGGGGTCATCAACGTTGCTATGATGTTTCCTTTGGGTTCATTTAACCCTATTTAACCACATATTTCAACAACAGAAAGATTTAAACTCAGAGCAAGGTGGTCAACAGCACACATCTA-TTATGTACCATTTACAGAC---TCC-TGAAGACCTGTTGTTCTC--TCTCTACC------ATTTGGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTTGTTAGGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGGCACAGAAACAAAAATAGAATGTGGGTTTGAatacacatgaaatacctacatctatgt--catacatatacacatacacTAAAATA s panTro5.chr4 192982845 545 + 194502333 GCCAGGAGGATAACCCTCCGAATCAAA-TCGAAGATCATTTCATTGTAAAGCTCCTCCTATGTTGACATTTCTGGGGAACTATGACAAACTCAAGGC-------CTCGGAGGGCCCTAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAACTTGGGCACCATTTATGTCAACATAGGGGTCATCAACGTTGCTATGATGTTTCCTTTGGGTTCATTTAACCCTATTTAACCACATATTTCAACAACAGAAAGATTTAAACTCAGAGCAAGCTGGTCAACAGCACACATCTA-TTATGTACCATTTACAGAC---TCC-TGAAGACCTGTTGTTCTC--TCTCTACC------ATTTGGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTTGTTAGGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGGCACAGAAACAAAAATAGAATGTGGGTTTGAatacacataaaatacatacatctatgt--catacgtatacacatacacTAAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867279 545 + 195804263 GCCAGGAGGATAACCCTCCGAATCAAA-TCGAAGATCATTTCATTGTAAAGCTCCTCCTATGTTGACATTTCTGGGGAACTATGACAAACTCAAGGC-------CTCGGAGGGCCCTAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAACTTGGGCACCATTTATGTCAACATAGGGGTCATCAACGTTGCTATGATGTTTCCTTTGGGTTCATTTAACCCTATTTAACCACATATTTCAACAACAGAAAGATTTAAACTCAGAGCAAGCTGGTCAACAGCACACATCTA-TTATGTACCATTTACAGAC---TCC-TGAAGACCTGTTGTTCTC--TCTCTACC------ATTTGGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTTGTTAGGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGGCACAGAAACAAAAATAGAATGTGGGTTTGAatacacataaaatacatacatctatgt--catacgtatacacatacacTAAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899439 545 + 4876863 GCCAGGAGGGTAACCCTCCGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACTATGACAAACTCAAGGC-------CTCGGAGGGCCCTAGACTCCATTTCATTAAATACAATTTGTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAACTTGGGCACCATTTATGTCAACATAGGGGTCATCAACGTTGCTATGATGTTTGCTTTGGGTTCATTTAACCCTGTTTAACCACATATTTCAATAACAGAAAGATTTAAACTCAGAGCAAGGTGGTCAACAGCACACATCTA-TTATGTACCATTTACAGAC---TCC-TGAAGACCTGTTGTTCTC--TCTCTACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTCCGTTAAGTATTTTCCTGGTCCAGCATTA--TTTTATAATTCAAATATTAGGGCACAGAAACAAAAATAGAATGTGGGTTTGAACACACGTAAAatacatacatctatgt--catacatatacacatacacTAAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793244 548 + 115148730 GCCAGGAGGATAACCCTCCGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACTATGACAAACTCAAGGC-------CTCAGAGGGCCCTAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAACTTGGGCACCATTTATGTCAACATAGGGGTCATCAACGTTGCTATGATGTTTCCTTTGGGTTCATTTAATCCTATTTAACCACATATTTCAATAACAGAAAGATTTAAACTCAGAGCAAAGTGGTCAACAGCACACATCTA-TTATGTACCATTTACGGACCTGTTC-TGAAGACCTGTTGTTCTC--TCTCTACC------ATTTTGTCTCTTGTCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCGTTAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGGCACAGAAACAAAAATAGGATGTGGGTTTGAatacacatacaatacatacatctatgt--catatatatacacatacacTAAAATA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189063729 538 + 190429646 -GCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCGACATTTGGGTCATCAACGTTGCTATGATGCTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----TGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCACGTC-TTATGTACCATTTACAGAC---TCC-AGAAGACCTATTGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCATCAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGACACAGAAACAAAAA----ATGTGAGTTTGTATACACATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188007352 538 + 189454096 -GCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCGACATTTGGGTCATCAACGTTGCTATGATGCTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----TGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCACATC-TTATGTACCATTTACAGAC---TCC-AGAAGACCTATTGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCATCAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGACACAGAAACAAAAA----ATGTGAGTTTGTATACACATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24397756 538 - 25927173 -GCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCGACATTTGGGTCATCAACGTTGCTATGATGCTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----AGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCACATC-TTATGTACCATTTACAGAC---TCC-AGAAGACCTATTGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCATCAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGACACAGAAACAAAAA----ATGTGAGTTTGTATACACATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3428097 538 + 4669795 -GCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCAACATTTGGGTCATCAACGTTGCTATGATGCTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----AGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCACGTC-TTATGTACCATTTACAGAC---TCC-AGAAGACCTGTTGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCATCAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGACACAGAAACAAAAA----ATATGAGTTTGTATACACATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384177 539 + 135778131 GGCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGTTTCTCCTATATTGACACTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCAACATATGGGTCATCAACGTTGCTATGATGCTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----AGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCACGTC-TTACGTACCATTTGCGGAC---TCC-AGAAGACCTGTTATCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTCATCTCTTTTCATTAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATTTTGGGACACAGAAACAAAAA----ATGTGAGTTTGTATACCCATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i chlSab2.chr7 I 7 C 0 s manLeu1.NW_012107108v1 8145 539 + 1527111 GGCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATATTGACATTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCAGGGACCTTGACCTCAGGAAACAAGTTGGGCACTATTTATGTCAACATTTGGGTCATCAACGTTGCTATGATACTTCCTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----AGATTTAAACTCAGAGCAAGGTAGTCAACTGCACTCATGTC-TTATGTACCATTTACAGAC---TCC-AGAAGACCTATTGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCATCAAGTATTTTCCTGGTCCAACATTA--TTTTATAACTCAAATATTAGGACACAGAAACAAAAA----ATGTGAGTTTGTATACACATGAAATACATACGTCTATGTAATATATATATACACATACACTAAAATA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 949978 539 + 2368649 GGCAGGAGGATGACTCTCAGAATCAAA-TCGAAGATCATTTCATTCTAAAGCTCCTCCTATCTTGACGTTTCTAGGGAACGATGGCAAACTCAAGGC-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAGTTTTCGAATGGGTATCAGGGAGCTCGACCCCAGGAAACAACTTGGGCACTATTTATGTCAACATAAGGGTCATCGACGTTGCTATGATGCTTCGTTTGGGTTAATTTAACCCTATTTAACCACATATTTCAATAAT----AGATTTAAACTCAGAGCAAGGTAGTCAGCTGCACTCATGTC-TTATGTGCCATTTACGGAC---TCC-AGAAGACCTGTCGTCCTC--TCTCCACC------ATTTTGTCTCTTGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTCTCATTAAGTATTTTCCTGGTCCAACATTA--TTTTATAATTCAAATATTAGGACACAGGAACAAAAA----ATGTGAGTTTGTATACACATGAAATACATACGTCTATGTTATATATATATACACATACACTAAAATA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689407 537 - 190850796 GCCAGGAGGATGA--CTCAGAACCAGA-TCTAAGATCATCTCCCTGTAAAGCTCCTTCTATACTGACATTTCTAAGGAACTATGGCAAACTCAAGGC-------CTCAGAGGGCCCGAGACTCCATTTCATTAAATACAATTTTTGAATGGGTATCGGGGACCCTGACCTCAGGAGACAGCTCAGCCATCATTTATGTCGACATATGGGTCATCAGCATTGCTATTATGCTTCCCTTGGGTTGATTTAACCCTATTTAGCCTCATATTTCAATAAT----AGATTTAAACTCGGAGCAAGGTGGTCAGCTGCACACATCTA--TACGTACAATTCACGGAC---TCT-AGAGGACCTGCTGTCCTC--TCCCCACC------ATTTTGCCTC-TGCCGTATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCGTTAAGTATCTTCTTGGTCCAACATTA--TTTTATGAATCAAATATTAGGACAAAGAAACAAAAACAGAATGTGAGTTTGCATCTGAATAAAATATATACATCTATGT--AATACGTACACACATACACTAAAATA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13178351 539 - 14256875 GCCAGAAGGATGACTCTCAGAATCAGA-TCTAAGATCATCTCCTTCTAAAGCTCCTCCTATACTGACATTTCTAAGGAACTATGGCCAGCCCAAGGT-------CTCAGAGGGCCCCAGACTCCATTTCATTAAATACAATTTTTGAATGGGTGTCAGCAACCTTGACCTCAGGAAACAACTCAGCCATCATTTATGTCAACATATGGGTCATCAACATTGCTATTACGCTTCCTTTGGGTTAACTTAGCCCTATTTAGTCTCATGTTTCAACAAT----AGATTTAAACTCGGAGCAAGGTGGTCAGCTGCACACATCTC--TATGCACAATTCACGGAC---TCC-AGAGGACCTGCTGTCCTC--TGTCCACC------ATTTGACCTC-TGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTTGTTAAGTATTTTCTTGGTCCAACATTA--TTTTATAAGTCAAATATTAGGACAGAGAAACAAAAATAGAATGTGAGTTTGCATACAAATAAAATATATACGTCTATGT--AATACATATACACATACACTAAAATA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1072809 537 - 2196201 GCCAGGAGGATGACTCTCAGAATCAGA-TCTAAGATCATCTCCTTCTAAAGCTCCTCCGGTACTGACATTTCTAAGGAACCATGGCAAACTCAAGGC-------CTCAGAGGGCCGCGGACTCCATTTCATTAAATACAATTTTTGAATAGGTATCAGCGACCTTGACCTCAGGAAACAACTCAGCCATCATTTATGTCAACATATGGGTCATCAACATTGCTATTATGCTTCCTTTGGGTTAACTTAACCCTATTTAGCCTCATATTTCAACAAC----AGATTTAAACTCGGAGCAAGGTGGTCAGCTGCACACATCTA--TACGTACAATTCACGGAC---TCC-AGAGGACCTGCTGTCTGC--TCTCCACC------ATTTGACCTC-TGCCATATTTCTTCAGGTTTATTAGTGATTTACCTCTTATCGTTAAGTATTTTCTTGGTCCAACATTA--TTTTATAAATCAAATATTAGGACAGAGAAACAAAAATAGAATGTGAGTTTGCATACAAACAAAATATATACATCTATGT--AAGATGTATACAC--ACACTAAAATA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462151 538 - 5030052 GCCAGGAGGATGACTCTCAGAATCAGA-TCTAAGATCATCTCCTTCTAAAGCTCCTCCTATACTGACATTTCTAAGGAACCATGGCAAACTCAAGGC-------CTCAGAGGGCCTCAGATTCCATTTCATTAAATACAATTTTTGAATGGGTATCGG-GACCTTGACCTCAGGAAACAACTCAGCCATCGTTTATGTCAACATATGGGTCATCAACATTGCTATTATGCTTCCTTTGGGTTAACTTAACCCTATTTAGCCACATATTTCAATAAT----AGATTTAAACTCGGAGCAAGGTGGTCAGCTGCACACATCTA--TACGTACAATTCACGGAC---TCT-AGAGGATCTGCTGTCCTC--TCTCCACC------ATTTTGCCTC-TGCCATATTTCTTCAGGTTTATTAGTGATTTATCTCTTTTCGTTAAGAATTTTCTTGGTCCAACATTA--TTTTATAAATCAAATATTAGGACAGAGAAACAAAAATAGAATGTGAGTTTGCATACAAATAAAATATATACAGCTATGT--AATATGTATACACATACACTAAAATA i aotNan1.NW_018492112v1 C 0 I 28 s dasNov3.JH570353 1521002 496 - 2520184 GTCAGGACGGGG--TCCTAGAAGCAGGCTCAACCATCGTTTGCTCTTCAAGCTCCTCCTCTACTGGCGTTTCCAGGGACCCGTGGCCCGCTCGAGGCTGGCAGGCCCAGA-GCCCCCGGCCTCTAGCTCACC-AGCCTAGCCCCTGGAATGATGTGAGGGGCCTGG--CCCAGGAAAGGACTTGGCCAC---TTA-GTCAGTTTACGGGTCACTACAACTGTTCTTAGCCTTTCCCTGGGTTAA----------------------TTCTAGAAAC------ATGTACCCTCAGACCAAGGAGGCCACCTGTACGTATTTTATAATATACTATTTTTTTGG---TCTGAGAAGCCCTTTTGCTCTCCATTTCCAGCCCCCTAATTTTGCCCCTTGACTTATCCCTTCAGGATTATTACTTATTTAT-TCTTTTTCTTAAGGATTTTACTGGTCGCAAATTATCTTTTACAATTGTATGATGAGG----------AAAAA------------TTGTACACATGTG---TATGTACG--TATGT-----ATCTTTATATACAACCTGAAATA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=68018.000000 s hg38.chr4_KI270789v1_alt 198442 14 + 205944 GTTTGC-AATGGGTA s panTro5.chr4 192983390 14 + 194502333 GTTTGC-AATGGGTA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867824 14 + 195804263 GTTTGC-AATGGGTA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899984 14 + 4876863 GTTTGC-AATGGGTA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793792 14 + 115148730 GTTTGC-AATGGGTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189064267 15 + 190429646 GTTTGCAAAGGGGTA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188007890 15 + 189454096 GTTTGCAAAGGGGTA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24398294 15 - 25927173 GTTTGCAAAGGGGTA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3428635 15 + 4669795 GTTTGCAAAGGGGTA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384716 15 + 135778131 GTTTGCGAATGGGTA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8684 15 + 1527111 GTTTGCAAAGGGGTA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 950517 15 + 2368649 GTTTGCAAATGGGTA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689944 5 - 190850796 ----------AGGTA i calJac3.chr3 C 0 I 23 s saiBol1.JH378165 13178890 5 - 14256875 ----------AGGTA i saiBol1.JH378165 C 0 I 23 s cebCap1.NW_016107886v1 1073346 5 - 2196201 ----------AGGTA i cebCap1.NW_016107886v1 C 0 I 23 s dasNov3.JH570353 1521498 15 - 2520184 GGTTGTGAATGAGTA i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e aotNan1.NW_018492112v1 3462689 28 - 5030052 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=1751757.000000 s hg38.chr4_KI270789v1_alt 198456 203 + 205944 TAGAAATTAGAAGGGGGATAATATAAAGTAAACTTAAACAGCTTCAGAATTTTGCCAGAAACCAGCCCTGAACTTAAC-------------------------------------GATAACCCCATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCATGTTTACTCGGAAATGAGTTCCCCAGCGTGAAACTCAAGAGTGAGGAGAGAGAACTTTTAGAATTTGCCACACACCTGCTT s panTro5.chr4 192983404 202 + 194502333 TAGAAATTAGAAGGGGGATAATATAAAGTAAACTTAAACAGCTTCAGAATTTTGCCAGAAACCAGCCCTGAACTTAAC-------------------------------------AATAACCCCATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTACTTGGAAATGAGTTCCCCAGCGTGAAACTC-AGAGTGAGGAGAGAGAACTTTTAGAATTAGCCACACACCTGCTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192867838 202 + 195804263 TAGAAATTAGAAGGGGGATAATATAAAGTAAACTTAAACAGCTTCAGAATTTTGCCAGAAACCAGCCCTGAACTTAAC-------------------------------------AATAACCCCATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTACTTGGAAATGAGTTCCCCAGCGTGAAACTC-AGAGTGAGGAGAGAAAACTTTTAGAATTAGCCACACACCTGCTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3899998 239 + 4876863 TAGAAATTAGAAGGGGGATAATATAAAGTAAACTTAAACAGCTTCAGAATTTTGCCAGAAACCAGCCCTGAACTTAATAATAACCCCATCTCAATAGAAAGAAGAGAGGCAGAAAAATAACCCCATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTACTCGGAAATGAGTTCCCCAGCGTGAAACTC-AGAGTGAGGAGAGAGAACTTTTAGAATTTGCCACACACCTGCTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112793806 239 + 115148730 TAGAAATTAGAAGGGGGATAATATAAAGTAAACTTAAACAGCTTCAGAATTTTGCCAGAAACCAGCCCTGAACTTAACAATAACCTCATCTCAGTAGAAAGAAGAGAGACAGAAAAATAACCCCATCTCAATAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTACTCGGAAATGAGTTCCCCAGCGTGAAACTC-AGAGTGAGGAGAGAGAACTTTTAGAATTTGCCACACACCTGCTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189064282 196 + 190429646 TAGAAATTGGAAGGGGGATAATA-----TAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AATAACCACATCTCAGCAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTGAGAATTTGCCACACACCTGCTT i rheMac8.chr5 C 0 I 12 s macFas5.chr5 188007905 196 + 189454096 TAGAAATTGGAAGGGGGATAATA-----TAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AATAACCACATCTCAGCAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTGAGAATTTGCCACACACCTGCTT i macFas5.chr5 C 0 I 12 s macNem1.NW_012013133v1 24398309 196 - 25927173 TAGAAATTGGAAGGGGGATAATA-----TAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AATAACCACATCTCAGCAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTGAGAATTTGCCACACACCTGCTT i macNem1.NW_012013133v1 C 0 I 12 s cerAty1.NW_012001672v1 3428650 196 + 4669795 TAGAAATTGGAAGGGGGATAATA-----TAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AATAACCGCATCTCAGCAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTGAGAATTTGCCACACACCTGCTT i cerAty1.NW_012001672v1 C 0 I 15 s chlSab2.chr7 134384731 196 + 135778131 TAGAAATTGGAAGGGGGATAATA-----TAAACGTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AATAACCACATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTTAGAATTTGCCACACACCTGCTC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8699 196 + 1527111 TAGAAATTGGAAGGGGGATAATA-----TAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGTTTAAC-------------------------------------AATAACCGCATCTCAGCAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTCCTAGGAAATGAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTGAGAATTTGCCACACACCTGCTT i manLeu1.NW_012107108v1 C 0 I 15 s colAng1.NW_012116221v1 950532 201 + 2368649 TAGAAATTGGAAGGGGGATAATATAAAGTAAACTTAAACAGGTTCAGAATTTTGCCAGAAACCAGCCCTGAGCTTAAC-------------------------------------AGTAACTGCATCTCAGTAGAAAGAAGAGAGGCTGAGTAAAGGCACGTTTACCAGGATATAAGTT-CCCAGTGTGAAACTC-AGAGTGAGGAGAGAGAACTTTTAGAATTTGCCACACACCTGCTC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189689972 198 - 190850796 TAAATATTGGAGGGGGGATAATGTAAATCACACTTTAACAGCTTCAGAATA--GTCAGAAACCAGCCCTGAACCTAAC-------------------------------------AATAACCCTGTCTCAGTAGAAAGAAGAGAGGCAGAGTAAAGGCACATTAACTAAGAAATGAGTTCCCCTGTGTGAAACTC-AGAGGGAGGAGAGAGAACTT--GGGATTTGCCCCTCACCTGCTC i calJac3.chr3 I 23 C 0 s saiBol1.JH378165 13178918 197 - 14256875 TAAATATTAGAGGGGGGATAATATAAATCACACTTTAACAGCTTCAGAATATTGCCAGAAACCAGCCCTGAAGCTAAC-------------------------------------CATCACCCCACCTCAGTAGAAAGAAGACAGGCAGAGTAAAGGCACGTTTACTAAGAGGTGAGTTCCCCTGTGTGAAACTC--GAGTGAGGAGAGAAAGC----AGAATTTACCCGTCGCCTGCTC i saiBol1.JH378165 I 23 C 0 s cebCap1.NW_016107886v1 1073374 199 - 2196201 TAAATCTTAGA-GGGGGATAATATAAATCACACTTTAACAGCTTCAGAATATTGTCAGAAACCAGCCCTGAACCAAAC-------------------------------------GACAACCCCGCCTCAGTAGAAAGAAGGGAGGCAGAGTAAAGGCACGTTTACTAAGAAATGAGTTCTCCTGTGTGAAGCTC-AGAGTGAGGAGAGAAAACTG--AGGATTTGCCCGTGGCCTGCTC i cebCap1.NW_016107886v1 I 23 C 0 s aotNan1.NW_018492112v1 3462717 200 - 5030052 TAAATATTAGAGGGGGGATAATATAAATCACAGTTTAACAGCTTCAGAATATTGCCAGAAACCAGCCTTGAACCTAAC-------------------------------------AATAACCCCATCTCAGTAGAAAGAAGAGAGGCACAGTAAAGGCATGTTTACTAAGAAATGAGTTCCCCTGTGTGAAATTC-AGAGTGAGGAGAGAATACTT--AGGATTTGCCCCTCGCCTGCTC i aotNan1.NW_018492112v1 I 28 C 0 s dasNov3.JH570353 1521513 143 - 2520184 TAGAAAGTAGAAGTGGGGTATTAGAAAGTAAATTTTAACTGTTTTGCAATTTTTCCAGGAACCAGCCTTGACCAT-AC-------------------------------------AATGA----AGAACGGTAGAATGAAGAAAGGTGGAGGAAGGA---GATAACCAGGCACTGCACATGCCAGTCT---------------------------------------------------- i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=-8116.000000 s hg38.chr4_KI270789v1_alt 198659 3 + 205944 ---TCT s panTro5.chr4 192983606 3 + 194502333 ---TCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868040 3 + 195804263 ---TCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900237 3 + 4876863 ---TCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794045 3 + 115148730 ---TCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189064490 2 + 190429646 ----CA i rheMac8.chr5 I 12 I 1 s macFas5.chr5 188008113 2 + 189454096 ----CA i macFas5.chr5 I 12 I 1 s macNem1.NW_012013133v1 24398517 2 - 25927173 ----CA i macNem1.NW_012013133v1 I 12 I 1 s chlSab2.chr7 134384927 3 + 135778131 ---TCT i chlSab2.chr7 C 0 C 0 s colAng1.NW_012116221v1 950733 3 + 2368649 ---TCT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690170 3 - 190850796 ---CCT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179115 3 - 14256875 ---TCT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1073573 3 - 2196201 ---TCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462917 3 - 5030052 ---TCT i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1521656 3 - 2520184 GGG--- i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e manLeu1.NW_012107108v1 8895 15 + 1527111 I e cerAty1.NW_012001672v1 3428846 15 + 4669795 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=17848.000000 s hg38.chr4_KI270789v1_alt 198662 2 + 205944 GT s panTro5.chr4 192983609 2 + 194502333 GG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868043 2 + 195804263 GG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900240 2 + 4876863 GA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794048 2 + 115148730 GA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189064493 2 + 190429646 GA i rheMac8.chr5 I 1 C 0 s macFas5.chr5 188008116 2 + 189454096 GA i macFas5.chr5 I 1 C 0 s macNem1.NW_012013133v1 24398520 2 - 25927173 GA i macNem1.NW_012013133v1 I 1 C 0 s cerAty1.NW_012001672v1 3428861 2 + 4669795 GA i cerAty1.NW_012001672v1 I 15 C 0 s chlSab2.chr7 134384930 2 + 135778131 GA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8910 2 + 1527111 GA i manLeu1.NW_012107108v1 I 15 C 0 s colAng1.NW_012116221v1 950736 2 + 2368649 GA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690173 2 - 190850796 GA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179118 2 - 14256875 GA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1073576 2 - 2196201 GA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462920 2 - 5030052 GA i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1521659 2 - 2520184 GG i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17011790 23 - 59632846 I e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=3671659.000000 s hg38.chr4_KI270789v1_alt 198664 380 + 205944 TGCATATTAACCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGTCAAGGTCAGAAAAATAGCGATTGTTGGTGTATGTGATAAAT---------TGATGTGTACTTGCCCTgggtca---gtcactactcacctgcagaagattcctgccttataggaagtaaaatctgtattgctgaatctcacacatttccagaaaaagccaggaagtgtggctactacaggaaattt-------------------------------------------------------------------------------------cctaatttttaaatatgaaatgatt----c--aaacatactgta--------gaaaaaaa--ctatacaatgtacagtaa-cca-cgcaatagaaatacatctgatgaatggatttggctcatgggccgccagct-tgtgacttctgATCAATG s panTro5.chr4 192983611 380 + 194502333 TGCATATTAACCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGtcaaggtcagaaaaatagcgattgttggtgtatgtgataagt---------tgatgtgtacttgccctgggtca---gtcactactcacctgcagaagattcctgccttataggaagtaaaatctgtattgctgaatctcacacatttccagaaaaagccaggaaatgtggctactacaggaaattt-------------------------------------------------------------------------------------cctaatttttaaatatgaaatgatt----c--aaacatactata--------gaaaaaaa--ctatacaatgtacagtaa-cca-cacaatagaaatacatctgatgaatggatttggctcatgggccgccagct-tgtgacttctgATCAATG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868045 380 + 195804263 TGCATATTAACCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGtcaaggtcagaaaaatagcgattgttggtgtatgtgataagt---------tgatgtgtacttgccctgggtca---gtcactactcacctgcagaagattcctgccttataggaagtaaaatctgtattgctgaatctcacacatttccagaaaaagccaggaaatgtggctactacaggaaattt-------------------------------------------------------------------------------------cctaatttttaaatatgaaatgatt----c--aaacatactata--------gaaaaaaa--ctatacaatgtacagtaa-cca-cacaatagaaatacatctgatgaatggatttggctcatgggccgccagct-tgtgacttctgATCAATG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900242 384 + 4876863 TGCATATTAACCACACGGTGCACTTTCCCCT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGtcaaggtcagaaaaatagcgattgttggtgtatgtgataagt---------tgatgtgtacttgccctgggtca---gttactactcacctgcagaagattcctgccttataggaagtaaaatctgtattgctgaatctcacacatttccagaaaaagccaggaaatgtggctactacaggaaattt-------------------------------------------------------------------------------------cctaatttttaaatatgaaatgattcaaac--aaacatactata--------gaaaaaaa--ctatacaatgtacagtaa-cca-tgcaatagaaatacatctgatgaatggatttggctcatgggccgccagct-tgtgacttctgATCAATG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794050 375 + 115148730 TGCATATTAACCACACAGTGCACTTTCCACT--GGCCGCTTGAA-CAGGCATGTCATGTATGAATGAAGTGGGTCAAGGTCAGAAAAATAACGATTGTTGGTGTATGTGATAAGT---------TGATGTGTACTTGCCCTGGGTCA---GTCACTATTCACCTGCAGAAGATTCCTGCCATATAGGAAGTAAAATCTGTATTGCTGAATCTCACACATTTCCAGAAAAAGCCA--------GGTTACTACAGGAAATTT-------------------------------------------------------------------------------------CCTAATTTTTAAATATGAAATGATTCAAAC--AAACATACTATA--------G-AAAAAA--CTATACAATGTACAGTAA-CCA-TGCAATAGAAATACATCTGATGAATGGATTTGGCTCATGGGCCGCTAGCT-TATGACTTCTGATCAATG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189064495 386 + 190429646 TGCATATTAATCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAAATAGCGATTGTTGGAGTATGTGATAAATGTGATAAGGTGATGCGTACTTGCTGTGAGTCA---GTCACTACTCACCCGCAGAAGATTCCTGCCTCATGGGAAGTAAAATCTGTATTGCTGAATCTCACAAATTTCCAGAAAAAGCCA--------GGTTACTACGGGAAATTT-------------------------------------------------------------------------------------CCTAATTTTTAAGTGTGAAATTATTCAACC--AAACATACTATG-------AAAAAAAAA--CTATACAATTTACAGTGA-CCA-TGCAATAGAAATACATCTGATGAATGGGTTTGGCTCATGGGCCACCAGCT-TATGACTTCTGATCCGTG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008118 387 + 189454096 TGCATATTAATCACACGGTGCACTTTCCACT--GGCTGCTTGAA-caggcacgtcatgtgtgaatgaagtgggccaaggtcagaaaaatagcgattgttggagtatgtgataaatgtgataaggtgatgcgtacttgctgtgagtca---gtcactactcacccgcagaagattcctgcctcatgggaagtaaaatctgtattgctgaatctcacaaatttccagaaaaagcca--------ggttactacgggaaattt-------------------------------------------------------------------------------------cctaatttttaagtgtgaaattattcaacc--aaacatactatg------aaaaaaaaaa--ctatacaatttacagtga-cca-tgcaatagaaatacatctgatgaatgggtttggctcatgggccaccagct-tatgacttctgATCAGTG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24398522 387 - 25927173 TGCATATTAATCACACGCTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAAATAGCGATTGTTGGAGTATGTGATAAATGTGATAAGGTGATGCGTACTTGCTGTGAGTCA---GTCACTACTCACCCGCAGAAGATTCCTGCCTCATGGGAAGTAAAATCTGTATTGCTGAATCTCACAAATTTCCAGAAAAAGCCA--------GGTTACTACGGGAAATTT-------------------------------------------------------------------------------------CCTAATTTTTAAGTGTGAAATTATTCAACC--AAACATACTATG------AAAAAAAAAA--CTATACAATTTACAGTGA-CCA-TGCAATAGaaatacatctgatgaatgggtttggctcatgggccaccagct-tatgacttctgATCAGTG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3428863 388 + 4669795 TGCATATTAATCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAAAAAACGATTGCTGGAGTATGTGATAAATGTGATAAGGTGATGCGTACTTGCTGTGAGTCA---GTCGCGACTCACCCGCAGAAGATTCCTGCCTTGTGGGAAGTAAAATCTGTATTGCTGAATCTCACAAATTTCCAGAAAAAGCCA--------GGTTACTACGGGAAATTT-------------------------------------------------------------------------------------CCTAATTTTTAAGTGTGAAATTATTCAACC--AAACATACTATGA-----AAAAAAAAAA--CTATACAATTTACAGTGA-CCA-TGCAGTAGAAATACATCTGATGAATGGGTTTGGCTCATGGGCCACCAGCT-TATGACTTCTGATCAGTG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134384932 389 + 135778131 TGCATATTAATCACACGGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAAATAGCGATTGCTGGAGTATGTGATAAATGTGATAAGGTGATGCGTACTTGCTGTGAGTCA---GTCACGACTCACCCGCAGAAGATTCCTGCCTTATGGGAAGTAAAATCTGTATTGCTGAATCTCACAAATTTCCAGAAAAAACCA--------GGTTACTATGGGAAATTT-------------------------------------------------------------------------------------CCTAATTTTTAAATGTGAAATTATTCAACC--AAACATACTATG------AAAAAAAAAAACCTATACAATTTACAGTGA-CTA-TGCAATAGAAATACATCTGATGAATGGGTTTGGCTCATGGGCCACCAGCT-TATGACTTCTGATCAGTG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 8912 389 + 1527111 TGCATATTAATCACACGGTGCACTTTCCACTGGGGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAAATAGCGATTGCTGGAGTATGTGATAAATGTGATAAGGTGATGCGTACTTGCTGTgagtca---gtcgcgactcacccgcagaagattcctgccttgtgggaagtaaaatctgtattgctgaatctcacaaatttccagaaaaagcca--------ggttactacgggaaattt-------------------------------------------------------------------------------------cctaatttttaagtgtgaaattattcaacc--aaacatactatg------aaaaaaaaaa--ctatacaatttacagtga-cca-tgcaatagaaatacatctgatgaatgggtttggctcgtgggccaccagct-tatgacttctgATCAGTG i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 950738 386 + 2368649 TGCATATTAATCACACAGTGCACTTTCCACT--GGCTGCTTGAA-CAGGCACGTCATGTGTGAATGAAGTGGGCCAAGGTCAGAAAaatagcgagtgttggagtatgtgataaacgtgataaggtgatgcgtacttgctgtgagtca---gtcactactcacccgcagaagattcctgccttatgggaagtaaaatctgtattcctgaatctcacaaatttccagaaaaagtca--------ggttactatgggaaattc-------------------------------------------------------------------------------------cctaacttttaaatgtgaaattattcaacc--aaacatactatg-------gaaaaaaaa--ctatacaatttacagtga-cca-tgcaatagaaatacatctgatgaatgggtttggctcatgggccaccagct-tatgacttctgATCAGTG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690175 373 - 190850796 TGCACGTGAATCATGTAGTGCACTTTCCACT--GGCTGCTTGAA-GAAGCGTGTCAC--GTGAACGAAGTGGAGCAAGGTCAgaaaag-ggcgatggtgggcgtgtgggataagc---------cggtgagtacttgctgtgggtca---gtc---actcacctccggaagattcctgctgtggaggaagtagaaccgggattgctgaatctcacaaatttccagaaaaagcca--------ggttactacatgaaattt-------------------------------------------------------------------------------------cctaatttttaaatgtgaaattattcaacc--aaacatgctatag-----agaaaaacag--ctgtgcggtgtacagtaa-cca-tgcagcagaagtacatctgatgaacggatttggctcatggactgccagtt-tatgacttccgGTCAATG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179120 378 - 14256875 TGCATGTGGACCACGCGGTGCACTTCCCACT--GGCTGCCTGAA-GAGAGGAGTCACGTGtgaatgaggtggagcatggtcagaaaag-agcgatcgttggcgtgtgcgatgagc---------tggtgaggacttgctgggggtca---gtcactactcagctccggaagattcctgctgtggaggaagtaaaacctgtattgctgaatctcacagatttccagaaaaagcca--------ggtgactacatgaaattt-------------------------------------------------------------------------------------cctgatttttaattgtgaaattattcagcc--aaacatactacag-----agaaaaccaa--ctgtgcaatgtacaataa-cca-tgcagcagaaatacgtctgatgaatggatttggctcacagactgccagtt-tatgacttctgGTCAGTG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1073578 370 - 2196201 TGCATGTGGACCACACAGTGCACTTCCCACT--GGCTGCTTGAA-GAGGCGTGTCACGTGTGAACAAGGTAGAGCAAGGTCGGAAAAG-AGCGATCGTTGGC-------ACAAGC---------CGGTGAGTACTTGCTGTgggtca---gtcactactcacctccggaagattcctgctgtggaggaagtaaaacctgtattgctgaatctcacaaagttccagaaaaagcca--------ggtgactacatgaaattt-------------------------------------------------------------------------------------cctaatttttaaatgtgaaattattcagcc--aaacatgctacag-----aaaaaaacaa--ccgtacaatgtacaataa-cca-tgcagtacaaataca-ctgatgaacggatttggctcacggactgccagtt-tatgacttctgGTCAGTG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3462922 375 - 5030052 TGCATGTGAATCATGCAGTGCACTTTCCACT--GGCTGCTTGAA-GAGGCGTGTCATGTGTGAATGAAGTGGAGCAAGGTCAGAAAAG-AGTGATTGTTGGTGTGTGTGATAAGC---------CAGTGAGTACTTGCTGTgggtca---gtc---attcacctccggaagattcctgctgtggaggaagtaaaatctgtattgctgaatctcacaaatttccagaaaaagtca--------ggttactacatgaaattt-------------------------------------------------------------------------------------cctaatttttaaatgtgaaattattcatcc--aaacatactacag-----aaaaaaacaa--ctatacaatgtacaataa-cca-tgcagtagaaatacatctgatgaatggatttggctcatggactgccagtt-tatgacttctgGTCAATG i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17011813 378 - 59632846 TGCATACTAATCACATATTACACTcttaaat--ggctacttggaccaggcaagaaatatatgagtgaaatgagccaaggtaagaaaaatcacaattgttggaatctatggtaaac---------tgatctctacttgccatg-gcca---g-aaggactcacctccagaagatttctgccctgtagaaagtgaactccatgatgagaaatctcatg-attttcaaaagaagcca--------atttactatgtgaaattt-------------------------------------------------------------------------------------cccggtttttaag-------ttattcaattaaaaaaatactatagaggcaaaaatcaaaa--caatacaactcacaacag-tcattgcaatagaagtacatctgctgaatgaatttggctcacaggctgccagtt-tatgacttctgATCAAAT i canFam3.chr16 I 23 C 0 s dasNov3.JH570353 1521661 437 - 2520184 --TGTATTAATcagggagtacactcttaaat--gtctacttgaacccagc----------------aaggaaaataaagaaaggaagtgggcaacatttgatgtctatggtaagt---------ggatgtgcacttgccctgcctaaaaggtcatttttcagctccagaagattcct----tgtaggaagtgaattccatgttgctaaatctcacagtcattcaaaagatacca--------gactattatgtgaaatttccAGTTGTTTTCCTCCATtttattgaaaggtattcataaaccatacaattcatttaaaatgtgcaatcaatggcatttggtatTGCCTGCTTTTTAAATGTGAATATGTTCAATT--TAATATGATAGA---GGCAAAAACCAAG--CAATGCACCTCACAACAATCCC-TACAATAGAAATA----TGCAGAAGGAATTTGGCTCAAGGA-TGCCAGTTATTTTATTTCC-------- i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295580 6 - 11315646 I a score=1457505.000000 s hg38.chr4_KI270789v1_alt 199044 128 + 205944 TTTTGAAATTATCCCTGGGAGACATGGGGAAGAAAGATTCAATCTGTAAGGAGCCACATGCAGTTT-TGTGAGACAAT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACATAAAACGTGGCCCA s panTro5.chr4 192983991 128 + 194502333 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGATTCAATCTGTAAGGAGCCACATGCAGTTT-TGTGAGACAAT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACATAAAACATGGCCCA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868425 128 + 195804263 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGATTCAATCTGTAAGGAGCCACATGCAGTTT-TGTGAGACAAT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACATAAAACATGGCCCA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900626 128 + 4876863 TTTTGAAATTATCCCTGGGAGACTTGGGGAAGAAAGATTCAATCTGTAAGGAGCCACATGCAGTTT-TCTGAGACAAT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACATAGAACGTGGCCCA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794425 128 + 115148730 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGATTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACAAT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACATAAAACGTGGCCca i nomLeu3.chr7b C 0 I 178 s rheMac8.chr5 189064881 128 + 190429646 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGACTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008505 128 + 189454096 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGACTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24398909 128 - 25927173 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGACTCAGTCTGAAAGGAGTCACATGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429251 128 + 4669795 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGACTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385321 128 + 135778131 TTTTGAAATTATCCCTGGGAGACGTGGGCAAGAAAGATTCAGTCTGAAAGGAGCCACCTGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAACTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9301 128 + 1527111 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGACTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACACT-TTGCAGACTTCAAAGTGACTGAGTCAGAGTATGTACAGAAAACGTGGCCCA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951124 128 + 2368649 TTTTGAAATTATCCCTGGGAGACGTGGGGAAGAAAGATTCAGTCTGAAAGGAGCCACATGCAGTTT-TGTAAGACAAT-TTGCAGACTGCAAAGTGACTGAGTCAGAGTATGTACCGAAAACGTGGCCCA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690548 127 - 190850796 TTCTGGAATTATCTCTGGGAGATGTGGGGAAGAAAGATTCCATCTGAAAGCAGCC-CATGCCGTCT-TGTAAGACAAT-CTGCATGCTTCAAAGTGACTGAGTCGGAGTATGTACTCAAAATGTGACCCA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179498 108 - 14256875 TTCTGGAATTATCTTTGGGAGATGTGGGGAAG-------------------AGCC-CATGCAGTCT-TGTAAGACAAT-TTGCAGGCTTCAAAGTGACTGAGTCGGAGTATGTACTCAAAACGTGACCCA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1073948 127 - 2196201 TTATGGAATTATCTTTGGGAGATGTGGGAAAGAAAGATTCAGTTTGAAAGGAGCC-CATGCAGTCT-TGTAAGACAGT-TTGCAGGCTTCAAAGTGACTGAGTCGGAGTATGTACTCAAAATGTGACCCA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463297 127 - 5030052 TTTTGGAATTATCTTTGGGAGATGTGGGGAAGAAAGATTCAATCCGAAAGGAGCC-CATGCAGTCT-TGTAAGACAAT-TTGCAGGCTTCGAAGTGACTGAGTTGGAGTATGTACTCAAAATGTGACCCA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295586 127 - 11315646 TTGTGAAATTATCTTTGAGAGATGTGGAAAAGAAAGATTCAATCTGAAAGGAGCCACA-ATGTTTT-TATAAGGGAAT-TTGTAGACTTCAAAGTGATAGAGTCAACGTAAACCCTCAGAATGTTGTCCA i otoGar3.GL873580 I 6 C 0 s canFam3.chr16 17012191 114 - 59632846 TTTTGAAATTATCTTTGGAAGACCAGGGAACGGAAGATTCAATTTGAAAGGAGCCACATGTAGTTT-TGCAAGAGAAT-CTGTAGACTTCAAA--------------GTATTCACTCAGAACATTGCCCA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522098 110 - 2520184 TT------TTATTTCTCGGAGCCTGGGAAAGGGAGAATACAACCTGAAAGGAACCACATGTAATTTCTCTAAGGGAATCTTGTAGACCTCAAA--------------GTATGACCTCAAATCATTGCTCA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=442093.000000 s hg38.chr4_KI270789v1_alt 199172 40 + 205944 AGGGAGAACAGAAATCTAAAATGAAACACATTAAGGTTAA s panTro5.chr4 192984119 40 + 194502333 AGGGAGAACAGAAATCTAAAATGAAACACATTAAGGTTAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868553 40 + 195804263 AGGGAGAACAGAAATCTAAAATGAAACACATTAAGGTTAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900754 40 + 4876863 AGGGAGAACAGAAATCTAAAATGAAACACATTAAGGTTAA i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189065009 40 + 190429646 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008633 40 + 189454096 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399037 40 - 25927173 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429379 40 + 4669795 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385449 40 + 135778131 AGGGAGAATGGAAATCTAAAATGAAACACGTGAAGGTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9429 40 + 1527111 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951252 40 + 2368649 AGGGAGAACGGAAATCTAAAATGAAACACGTGAAGGTTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690675 40 - 190850796 AGGGAGAAGAGAAACCTAAAATGAAACACATTAAGGTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179606 40 - 14256875 AGGGAGAACAGAAACCTAAAATGAAACACATTAAGGTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074075 40 - 2196201 AGGGAGAACAGAAACCTAAAATGAAACACATTAAGGTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463424 40 - 5030052 AGGGAGAACAGAAACCTAAAATGAAACACATTAAGGTTAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295713 40 - 11315646 AGAGAAAGAGAAAACCTGAAGCAAAGCACATTAAGGATAA i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17012305 37 - 59632846 AGGGAAAA-AGAAAACTAAAATAAGACA--TTAAGGTTAA i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522208 39 - 2520184 AGGGAGGA-AGATACCTAACATAGAATACAAGAAGGCTAA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I e nomLeu3.chr7b 112794553 178 + 115148730 I a score=44776.000000 s hg38.chr4_KI270789v1_alt 199212 4 + 205944 TACT s panTro5.chr4 192984159 4 + 194502333 TACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868593 4 + 195804263 TACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900794 4 + 4876863 TACT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189065049 4 + 190429646 TACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008673 4 + 189454096 TACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399077 4 - 25927173 TACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429419 4 + 4669795 TACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385489 4 + 135778131 TACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9469 4 + 1527111 TACT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951292 4 + 2368649 TACT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690715 4 - 190850796 TACT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179646 4 - 14256875 TACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074115 4 - 2196201 TACT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463464 4 - 5030052 TACT i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17012342 4 - 59632846 TACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522247 1 - 2520184 ---T i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I e nomLeu3.chr7b 112794553 178 + 115148730 I e otoGar3.GL873580 11295753 0 - 11315646 C a score=63364.000000 s hg38.chr4_KI270789v1_alt 199216 6 + 205944 ggccgg s panTro5.chr4 192984163 6 + 194502333 ggccgg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868597 6 + 195804263 ggccgg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900798 6 + 4876863 ggccag i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189065053 6 + 190429646 ggccgg i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008677 6 + 189454096 ggccgg i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399081 6 - 25927173 ggccag i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429423 6 + 4669795 ggccgg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385493 6 + 135778131 ggccgg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9473 6 + 1527111 ggccgg i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951296 6 + 2368649 ggccag i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690719 6 - 190850796 ggccag i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179650 6 - 14256875 ggccag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074119 6 - 2196201 ggccag i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463468 6 - 5030052 ggccag i aotNan1.NW_018492112v1 C 0 C 0 s dasNov3.JH570353 1522248 6 - 2520184 GGCCAG i dasNov3.JH570353 C 0 C 0 e canFam3.chr16 17012346 0 - 59632846 C e mm10.chr8 86661060 6673 - 129401213 I e nomLeu3.chr7b 112794553 178 + 115148730 I e otoGar3.GL873580 11295753 0 - 11315646 C a score=1091312.000000 s hg38.chr4_KI270789v1_alt 199222 134 + 205944 gcgcagtggctcatgcctgtaatcccagcacttt-ggggaccgagtcaggaggattacttgaagacaggagatcgagaccaacctgggcaacatcatgagacccatttctacaaaacaaatg-gaaaaatAGTTAC s panTro5.chr4 192984169 133 + 194502333 gcgcagt-gctcacgcctgtaatcccagcacttt-ggggaccgagtcaggaggattacttgaagacaggagatcgagatcaacctgggcaacatcatgagacccatttctacaaaacaaatg-gaaaaatAGTTAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868603 133 + 195804263 gcgcagt-gctcacgcctgtaatcccagcacttt-ggggaccgagtcaggaggattacttgaagacaggagatcgagatcaacctgggcaacatcatgagacccatttctacaaaacaaatg-gaaaaatAGTTAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900804 134 + 4876863 gcacagtggctcacgcctgtaatcccagcacttt-ggggaccgagtcaggaggattacttgaagacaggagatcgagaccaacctgggcaacatcatgagacccatttctacaaaacaaatg-gaaaaatAGTTAC i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189065059 135 + 190429646 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagacccatttctacaaaaCAAATG-GGAAAATGCTTGC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008683 135 + 189454096 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagacccatttctacaaaaCAAATG-GGAAAATGCTTGC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399087 135 - 25927173 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagacccatttctacaaaaCAAATG-GGAAAATGCTTGC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429429 134 + 4669795 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagacccatttctacaaaaCAAAT--GGAAAATGCTTGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385499 135 + 135778131 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagacccatttctacaaaaCAAATG-GGAAAATGCTTGC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9479 135 + 1527111 gcgcagtggctcatgtctgtaatcccagcacttcgggggactgagtcaggaggattacttaaggacaggtgatggagaccaacctgggcagcatcatgagatccatttctacaaaaCAAATG-GGAAAATGCTTGC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951302 134 + 2368649 gcgcagtggctcatgcctgtaatcccagcactttgggggactgagtcaggaggattacttaaggacaggtg-tggagaccaacctgggcaccatcatgagacccatttctacaaaaCAAATG-GGAAAATACTTGC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690725 135 - 190850796 gcacagtggcttatgcccgtaattccagcactttgggggaccgagtcagaaggattacttaaggacaggagatccagaccaacctgggcaacagcgtgagactcatttctacagaacagatg-aaaaAACAGTTAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179656 135 - 14256875 gcacagtggctcatgcctgtaattccagcactctgggggaccgagtcagaaggattacttaaggacaggagatccagaccaacctgggcaacagcatgagactcctttctacagaaCGAGTG-AAAAAGCAGTTAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074125 136 - 2196201 gcacagcggctcatgcctgcaattccagcactttgggggaccgagtcagaaggattacttaaggacaggagatccagaccaacctgggcaacagcatgagactcatttctacagaacaaatgaaaaAAACAGTTAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463474 135 - 5030052 gcacagtgactcatgcctgtaattccagcgctttgggggactgagtcagaaggattacttaaggacaggagatccagaccaacctgggcaacagcataagactcatttctacagaacaaatg-aaaaAACAGTTAA i aotNan1.NW_018492112v1 C 0 C 0 e dasNov3.JH570353 1522254 0 - 2520184 C e canFam3.chr16 17012346 0 - 59632846 C e mm10.chr8 86661060 6673 - 129401213 I e nomLeu3.chr7b 112794553 178 + 115148730 I e otoGar3.GL873580 11295753 0 - 11315646 C a score=27498.000000 s hg38.chr4_KI270789v1_alt 199356 3 + 205944 TAC s panTro5.chr4 192984302 3 + 194502333 TAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868736 3 + 195804263 TAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900938 3 + 4876863 TAT i gorGor5.CYUI01015356v1 C 0 C 0 s rheMac8.chr5 189065194 3 + 190429646 TAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008818 3 + 189454096 TAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399222 3 - 25927173 TAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429563 3 + 4669795 TAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385634 3 + 135778131 TAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9614 3 + 1527111 TAC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951436 3 + 2368649 TAC i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690860 3 - 190850796 TAT i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179791 3 - 14256875 TAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074261 3 - 2196201 TAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463609 3 - 5030052 TAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295753 3 - 11315646 TAC i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1522254 0 - 2520184 C e canFam3.chr16 17012346 0 - 59632846 C e mm10.chr8 86661060 6673 - 129401213 I e nomLeu3.chr7b 112794553 178 + 115148730 I a score=13600.000000 s hg38.chr4_KI270789v1_alt 199359 1 + 205944 C s panTro5.chr4 192984305 1 + 194502333 C i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868739 1 + 195804263 C i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900941 1 + 4876863 C i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794731 1 + 115148730 c i nomLeu3.chr7b I 178 C 0 s rheMac8.chr5 189065197 1 + 190429646 C i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008821 1 + 189454096 C i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399225 1 - 25927173 C i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429566 1 + 4669795 C i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385637 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9617 1 + 1527111 C i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951439 1 + 2368649 C i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690863 1 - 190850796 C i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179794 1 - 14256875 C i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074264 1 - 2196201 C i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463612 1 - 5030052 C i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295756 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 e dasNov3.JH570353 1522254 0 - 2520184 C e canFam3.chr16 17012346 0 - 59632846 C e mm10.chr8 86661060 6673 - 129401213 I a score=23252.000000 s hg38.chr4_KI270789v1_alt 199360 3 + 205944 CAT s panTro5.chr4 192984306 3 + 194502333 CAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868740 3 + 195804263 CAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900942 3 + 4876863 CAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794732 3 + 115148730 cat i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189065198 3 + 190429646 CAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008822 3 + 189454096 CAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399226 3 - 25927173 CAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429567 3 + 4669795 CAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385638 3 + 135778131 CAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9618 3 + 1527111 CAG i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951440 3 + 2368649 CAG i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690864 3 - 190850796 CAC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179795 3 - 14256875 CAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074265 3 - 2196201 CAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463613 3 - 5030052 CAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295757 3 - 11315646 CAC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17012346 3 - 59632846 CAA i canFam3.chr16 C 0 C 0 e dasNov3.JH570353 1522254 0 - 2520184 C e mm10.chr8 86661060 6673 - 129401213 I a score=1067236.000000 s hg38.chr4_KI270789v1_alt 199363 109 + 205944 AGGAATGAAAAGTCACTCATTTGCTATCACACAGACATACA--CATGTATGATAGCCAACTACCGGATTAAATCAGGCAGTCAGA------AAGAGAAAACAAAAAGAA---AAGGAGGC s panTro5.chr4 192984309 109 + 194502333 AGGAATGAAAAGTCACTCATTTGCTATCACACAGACATACA--CATGTATGATAGCCAACTATTGGATTCAATCAGGCAGTCAGA------AAGAGAAAACAAAAAGAA---AAGGAGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868743 109 + 195804263 AGGAATGAAAAGTCACTCATTTGCTATCACACAGACATACA--CATGTATGATAGCCAACTATTGGATTCAATCAGGCAGTCAGA------AAGAGAAAACAAAAAGAA---AAGGAGGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3900945 112 + 4876863 AGGAATGAAGAGTCACTCATTTGCTATCACACAGACATACA--CATGTATGATAGCCAACTATCGGATTAAATCAGGCAGTCAGA------AAGAGAAAACAAAAAGAAAAGAAGGAGGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794735 103 + 115148730 aggactgaaaagtcactcatttgctATCACACAGATATACA--CATGTGTGATAGCCGGCTATCGGATTAAATCAGGCAGTC----------AGAGAAAACAAAAAG-----AAGCAGGC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189065201 112 + 190429646 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACG--CATGTATGATAGCCGGCTATCAGACTAAATCAGGCAGTcaga------aagagaaaacaaaaagaaaagaagcaggc i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008825 112 + 189454096 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACG--CATGTATGATAGCCGGCTATCAGACTAAATCAGGCAGTcaga------aagagaaaacaaaaagaaaagaagcaggc i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399229 112 - 25927173 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACG--CATGTATGATAGCCGGCTATCAGACTAAATCAGGCAGTCaga------aagagaaaacaaaaagaaaagaagcaggc i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429570 108 + 4669795 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACA--CATGTATGATAGCCGGCTATCAGACTAAATCAGGCAGTcaga------aagagaaaacaaaaagaaaagaa----gc i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385641 112 + 135778131 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACA--CATGTATGATAGCCGGCTATCAGACTAAATCAGGCAGTcaga------aagagaaaacaaaaagaaaagaagcaggc i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9621 108 + 1527111 AGGAAGGAAAAGTCACTCATTTGCTATCACACAGGCATACA--CATGTATGGTAGCCGGCTATCAGACTAAATCAGGCAGTCCGa------aagagaaaacaaaaagaaaagaa----gc i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951443 112 + 2368649 AGCAAGGAAAAGTCACTCATTTGCTGTCACACAGACATACA--CATGTATGATAGCCAGCTATCAGATTAAATCAGGCAGTCaga------aagagaaaactaaaagaaaagaagcaggc i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690867 109 - 190850796 AGGAAGGAGAAGTCACTG--TTGCTGTCACACAGACAGACA--CATGTATAACAGCC-GTCACAGGACCCAGTCAGGCAGCCAGA------AAGTGAAAATACAAAGACAAGAAACAGGC i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179798 107 - 14256875 AGGAAGGAAGAGTCACTC--TTGCTGTCACACAGACATACA--CATATATAACA--T-GTTATAGGACCGAGTCAGGCAGCCAGA------AAGTGAAAATATAGAGAAAAGAAACAGAC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074268 109 - 2196201 AGGAAGGAGAAGTCACTC--TTGCTGTCACACGGACATACA--CATGTATAACAGCC-TTTGTAGGACCAAGTCAGGCAGCCAGA------GAGTGaaaatataaagaaaaggaagaggc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463616 109 - 5030052 AGGAAGGAAAAGTCACTC--TTGCTGTCACACAGACATACA--CATGTATAACAGCC-GTTATAGGACCAAGTCAGGCAGCCAGA------AAGTGAAAATATAAAGAAAAGAAACAGGC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11295760 107 - 11315646 AGGGAGGAAAAGTCATTTATTTGCTGTCACACAGACATACA--CACATATGAT-GTTGGCTATATGACCAAATAAGGCAGCCA-A------AAGAGAAAATAGATGTGC---ATGGAGGC i otoGar3.GL873580 C 0 I 488 s canFam3.chr16 17012349 117 - 59632846 AGGAAGGAAAAGTCACTC---TGCTATCATGCAGACATATACTCACACACGATTGCTGGCTGTAAGACCAAATCAGTATATAAGACTAAACCAGAGAAAGTAAGAAGAACAGAAACAAGC i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522254 101 - 2520184 AGGATGAAAAAGTCACTCATTTGCTATTGCACAGACTAA----CAGGCAAAACAGCTGGCAGTCTG--------AAGGAAAGAGA------AAGAGTAAATAAAAAAAAGAAACTTAGC- i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=84135.000000 s hg38.chr4_KI270789v1_alt 199472 8 + 205944 AAAAATAC s panTro5.chr4 192984418 8 + 194502333 AAAAATAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868852 8 + 195804263 AAAAATAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901057 8 + 4876863 AAAAATAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794838 8 + 115148730 AAAAATAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189065313 8 + 190429646 aaaaataa i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008937 8 + 189454096 aaaaataa i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399341 8 - 25927173 aaaaataa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429678 8 + 4669795 aaaaataa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385753 8 + 135778131 aaaaataa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9729 8 + 1527111 aaaaataa i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951555 8 + 2368649 aaaaataa i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690976 8 - 190850796 AGAAATAA i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179905 8 - 14256875 AAAAATAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074377 8 - 2196201 aaaaataa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463725 8 - 5030052 AAAAATAA i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17012466 7 - 59632846 aaaaata- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522355 8 - 2520184 AAAAGTTA i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I e otoGar3.GL873580 11295867 488 - 11315646 I a score=1724630.000000 s hg38.chr4_KI270789v1_alt 199480 188 + 205944 AACAGAAAAACATGA-AATTTAATCTTTCAATTTCGAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGAC--------------------------------------AAAAAAAAAAAAG-----ACAAAATTGCTTTCCTATG-------TATCAAGCTCAGGTG-TAATTATAG--TTCCACACTAAACTGCAGGCTTCATAcaaggacttgccacaa-------ctcttagttttag s panTro5.chr4 192984426 177 + 194502333 AACAGAAAAACATGA-AATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGAC--------------------------------------AAAAAAAAAAAAG-----ACAAAATTGCTTTCCTATG-------TATCAAGC------------TATAG--TTCCACACTAAACTGCAGGCTTCATAcaaggacttgccacaa-------ctcttagttttag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192868860 176 + 195804263 AACAGAAAAACATGA-AATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGAC---------------------------------------AAAAAAAAAAAG-----ACAAAATTGCTTTCCTATG-------TATCAAGC------------TATAG--TTCCACACTAAACTGCAGGCTTCATAcaaggacttgccacaa-------ctcttagttttag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901065 191 + 4876863 AACAGAAAAACATGA-AATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGAC-----------------------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATG-------TATCAAGCTCAGGTG-TAATTATAG--TTCCACACTAAACTGCAGGCTTCATACAAGGACTTGCCACAA-------CTCTTAGTTTTAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112794846 190 + 115148730 AACAGAAAAACATGA-AATTTAATCTTTCAATTTCGAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------AT---GATGAC----------------------------------------AAAAAAAAAAG-----ACAAAATTGCTTTCCTATGTCTCATATAGCAAGCTCAGGTG-CAATTATAG--TTCCACACTAACCTGCAGGCTCCATACAAGGACTTGCCACAA-------TTCTCAGTTTTAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189065321 213 + 190429646 aacagaaaaatataa-aATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTATCAGACAAGCAG----ACGAGGAC--TAGAAACCCA-------------ATGAAGATGGC-----aaaaaaaaaa--------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGGCTTCATACAAGGACTTACCACAA-------CTCTTAGTTTTAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188008945 206 + 189454096 aacagaaaaatataa-aATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTATCAGACAAGCAG----ACGAGGAC--TAGAAACCCA-------------ATGAAGATGGC------------aaa--------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGGCTTCATACAAGGACTTACCACAA-------CTCTTAGTTTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399349 208 - 25927173 aacagaaaaATATAA-AATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTATCAGACAAGCAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGGC----------aaaaa--------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGGCTTCATACAAGGACTTACCACAA-------CTcttagttttaa i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429686 200 + 4669795 aacagaaaaatataa-aaTTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTATCAGACAAGCAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGGC--------------------------------------AAAAAAAAAAAAG-----ACAAAATTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGTCTTCATACAAGGACTTACCACAA-------CTCTTAGTTTTAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385761 195 + 135778131 aacagaaaaatataa-aATTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTAT--------CAG----ATAAGGAC--TAGAAACCCA-------------ATGAAGATGGC-----------------------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGGCTTCATACAAGGACTTACCACAA-------CTCTCAGTTTTAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9737 211 + 1527111 aacagaaaaatataa-aaTTTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTATCAGACAAGCAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGGC-------aaaaaaaa--------------aaa------aaaaaaaaaaaag-----acaaaaTTGCTTTCCTATGTATCCTATAGCAA---CAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGTCTTCATACAAGGACTTACCACAA-------CTCTTAGTTTTAA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951563 209 + 2368649 aacagaaaaatataa-aATGTAATCTTTCAATTTCAAACT----------------------------------------------------------TTTTAT--------CAG----ACAAGGAC--TAGAAACCCA-------------ATGAAGATGAC-------AAAAAAAA-----------CCCCAA------ACAAACAAAAAAG-----ACAAAATTGCTTTCCTATATATCCTATAGCAAGCTCAGGTG-TAATTCTAG--TTCTACATTAAACTGCAGGCTTCATACAAGGACTTACCACAA-------CTCTTAGTTTTAA i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189690984 192 - 190850796 AACAGAAAAATATAA-AATTTAATCTTTCAATTTTGAACT----------------------------------------------------------TTTTAT--------CAG----ACAAAGAC--TAGAAACCCA-------------ATGAAGATGGC---------------------------------------AAAAAAAAAAAG-----ACAAAAC-ACTTTCATACACATCACACAGCAAGCTCGGGT--TAAGCACAG--TTCCACATTAAACTGTAGGCTTCACACAAGGACTTGCCACAA-------GTCTCAGCTTCAG i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13179913 196 - 14256875 AACAGAAAAATGTAA-AATTTAATCTTTCAATTTTGAACT----------------------------------------------------------TTTTAT--------CAG----AAAAAGAC--TAGAAACCTA-------------ATGAAGACGGC------------------------------AT------TAAAAAAAAAAAG-----ACAAAACAACTTTCATATGTATCATATAGCAAGCTCAGGT--TAAGTATAG--TTCCACATTAAGGTACAGGCTTCATACAAGAACCTGCCACAA-------GTCTCAGTTTCAG i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074385 197 - 2196201 aacagaaaaatataa-aatTTAATCTTTCAATTTTGAACT----------------------------------------------------------TTTTAT--------CAG----ACAAAAAC--TAGAAACCCA-------------ATGAAGATGGC-----------------------------aaa------aaaaaaaaaaaag-----acaaaacaaCTTTCATATATATCAAATAGCAAGCTCAGGT--TAAGTAGAG--TTCCACATTAAACTGCAGGCTGCATACAAGGACTTGCCACAA-------GTCTCAGTTTTAG i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463733 199 - 5030052 AACAGAAAAATATAA-AATTTAATCTTTCAA-TTTGAACT----------------------------------------------------------TTTTAT--------C------ACAAAGAC--TAGAAACCCA-------------CCGAAGATGGC---------aaaaaa--------------aaa------aaaaaaaaaaaaG-----ACTAAACAACTTTCATATATATCATATAGCAAGCTCA-GT--TAAGTACAA--TTCCACATTAAACTACAGGCTTCATACAAGGACTTGCCACAA-------GTCTTAGTCTTAG i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11296355 313 - 11315646 aatggaaaaacaaac-actatatattctcactattaaattggaagggaaatcaagctgggtggaaagaggagaggatggatgaaaacctaccagtgaatactat--------ctggggaacaagtacattaaataaccatgactcaagcattataaaagtgatttatgtagccaaaaatatttatacaaccttaatgctttaaaattaaaaaaT-----ACAAAACAATTTGCATATGTATCCTATAGAAAACTTGGGTATTAAATGCAGTTTTTCACATTTAATTATAGGTTTCATTCAAGTATCTGCTACAA-------CTCTCAGTCTTAG i otoGar3.GL873580 I 488 C 0 s canFam3.chr16 17012473 195 - 59632846 ----aaagaatataa-aaatt-----------ttttaatt----------------------------------------------------------tCTTAT---------AG----ACAAGAAC--TAGAAATTCA-------------ATGACGATGAC-----------------------------AAA------AATAACAAACAAAACCCCACCAAAGGACTTGCCTAGGTATTACATGGCAAACAGGGGCATTAATCACAC--TTTCACACTAAACTGCAGATTTTATAGAAGTATTTGCTGCAATAAAATTTGCTTAGTCTTAG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1522363 187 - 2520184 AATAGGGAAGTACAGCAATTAAATCTTTCTATT-----------------------------------------------------------------TCCTAT--------TTG----AACAGATC--TAGGGACCCG-------------GAAATGATGAC--------------------------------------AAAAATAAAA--------ATAAAACAACTTCTGTATGTATAATGTAGGAAAATCTTACATTAATCGTAA--TTTCATGTTAAGCTGCTGGTTTCATCAAAGAATTTGCTACAA-------CCTTTAATCTTAG i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86661060 6673 - 129401213 I a score=7634114.000000 s hg38.chr4_KI270789v1_alt 199668 597 + 205944 taccggctgtaatttatgttgtgtttagataaattcctgagctctctgtacctaa------tttttt------tt-aattagtgaaaaaa---cacagaaa---tagctt--acatgcttgctttaagaaat-----ag--ataaatAG-----AATATTATAT----T-----TTTAAACCTCATTATGCC---TAAGTATTTAATATCTACT--------GGTGATTTTATTCTTGGCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATGGTTATTGACCTGTTGTGCTGGTGAC-----AAGATGAGTCTTTTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCGTTGCATACCAAATTAGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAATGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTCATCTTAAAGGAG--CCCCCA-----GGACT-GTTAGCCATTGGT-AAACGCATAAGAATTGGAATAAATTGACTTTCATGATCACTGAAGCTTCGTTGGGAGAACTAGGAGCAGAG-----AAAAGAATGATAAA---TCAAAAA- s panTro5.chr4 192984603 597 + 194502333 taccggctgtaatttatgttgtgtttagatgaattcctgagctctctgtgcctaa------tttttt------tt-aattagtgaaaaaa---cacagaaa---tagctt--acatgcttgctttaagaaat-----ag--ataaatAG-----AATATTATAT----T-----TTTAAACCTCATTATGCC---TAAGTATTTAATATCTACT--------GGTGATTTTATTCTTGGCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATGGTTATTGACCTGTTGTGCTGGTGGC-----AAGATGAGTCTTTTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTTGTTGCATACCAAATTAGACTATACATTGTATTTCTGTCACTGAATGTTTACCTTAGTTGTTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAAAGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTCATCTTAAAGGAG--CCCCCA-----GGACT-GTTAGCCATTGGT-AAACGCATAAGAATTGGAATAAATTGACTTTCATGATCACTGAAGCTTCGTTGGGAGAACTAGGAGCAGAG-----AAAAGAATGATAAA---TCAAAAA- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869036 597 + 195804263 taccggctgtaatttatgttgtgtttagatgaattcctgagctctctgtgcctaa------tttttt------tt-aattagtgaaaaaa---cacagaaa---tagctt--acatgcttgctttaagaaat-----ag--ataaatAG-----AATATTATAT----T-----TTTAAACCTCATTATGCC---TAAGTATTTAATATCTACT--------GGTGATTTTATTCTTGGCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATGGTTATTGACCAGTTGTGCTGGTGGC-----AAGATGAGTCTTTTCTCTAGGAGACT-GGATTAGCTTGGTTGAAAATATTTGTTGCATACCAAATTAGACTATACATTGTATTTCTGTCACTGAATGTTTACCTTAGTTGTTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAAAGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTCATCTTAAAGGAG--CCCCCA-----GGACT-GTTAGCCATTGGT-AAACGCATAAGAATTGGAATAAATTGACTTTCATGATCACTGAAGCTTCGTTGGGAGAACTAGGAGCAGAG-----AAAAGAATGATAAA---TCAAAAA- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901256 596 + 4876863 TACCGGCTGTAATTTATGTTATGTTTAGAAGAATTCCTGAGCTCTCTGTACCTAA------TTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ACGTGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCC---TAAGTATTTAATATCTACT--------GGTGATTTTATTCTTGGCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATGGTTATTGACCTGTTGTGCTGGTCAC------AGATGAGTCTTTTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTAGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAAAGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTCATCTTAAAGGAG--CCCCCA-----GGACT-GTTAGCCATTGGT-AAACGCATAAGAATTGGAATAAATTGACTTTCATGATCACCGAAGCTTCGTTGGGAGAACTAGGAACAAAG-----AAAAGAATGATAAA---TCAAAAA- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795036 602 + 115148730 TACCGGCTGTAATTTATGTTATGTTTAGATAAATTCCTGAGCTCTCTGTACCTAA------TTTTTT------TTAAATTGGTGAAAAAA---CACAGAAA---TAGCTT--ACGTGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAAACTCATTATGCC---TAAGTATTTAATATCTACC--------AGTGATTTTATTCTTGGCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATGGTTATTGACCTATTGTGCTGATGACAAAAGAAGATGAGTCTTTTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTAGACTATACACTGTATTTATGCCACTGAATGTTTTCCTTAGTTGTTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAAGGTCTTATTCACTTGAGACCAGATAATTACAGTTAACGTAATCTTAAAAGAG--CCCCCA-----GGACT-GTTTGCCATTGGT-AAACGCATAAGAATTGGAATAAATTGACTTTCATGAT-ACTGAAGCTTCGTTGGGAGAACTAGGAACAGAG-----AAAAGAATGATAAA---TCAAAAA- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189065534 602 + 190429646 TACTGGCTGTAATTTATGTTGTGCTTAGACAAATTCCTGAGCTCTCTGTACCTAA----TTTTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ACGAGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCG---TAAGTGTTTACTATCTCCT--------GGTGATTTGATTCTTGGAGAGCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGATCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAGGAGACT-GGATCAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACACTGTATGTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAAGTAATTAAGGTCTTACTGACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGT-AAACACATAAGAATCGGAGCAAATTGACTTTCATGATCACTGAAGCTTCATTGGGAGAACTAGGAACAGAG-----AAAAGAATGATAAA---TTAAAAA- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188009151 602 + 189454096 TACTGGCTGTAATTTATGTTGTGCTTAGACAAATTCCTGAGCTCTCTGTACCTAA----TTTTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ACGAGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCG---TAAGTGTTTACTATCTCCT--------GGTGATTTGATTCTTGGAGAGCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACACTGTATGTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAAGTAATTAAGGTCTTACTGACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGT-AAACACATAAGAATCGGAGCAAATTGACTTTCATGATCACTGAAGCTTCGTTGGGAGAACTAGGAACAGAG-----AAAAGAATGATAAA---TTAAAAA- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24399557 603 - 25927173 tactggctgtaatttatgttgtgcttagacaaattcctgagctctctgtacctaat---tttttttt------tt-aattagtgaaaaaa---cacagaca---tagctt--acgagcttgctttaagaaat-----ag--ataaatAG-----AATATTATAT----T-----TTTAAACCTCATTATGCG---TAAGTGTTTACTATCTCCT--------GGTGATTTGATTCTTGGAGAGCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAGGATGAGTC--TTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAAGTAATTAAGGTCTTACTGACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGT-AAACACATAAGAATCGGAGCAAACTGACTTTCATGATCACTGAAGCTTCGTTGGAAGAACTAGGAACAGAG-----AAAAGAATGATAAA---TTAAAAA- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3429886 602 + 4669795 TACTGGCTGTAATTTATGTTGTGCTTAGACAAATTCCTGAGCTCTCTGTACCTAA----TTTTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ACGAGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCG---TAAGTGTTTACTATCTCCT--------GGTGATTTGATTCTTGGAGAGCATAGCAGGGGCCTTATGAGAAATATAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAATCTTATTTCAAAAGTAATTAAGGTCTTACTGACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGT-AAACACATAAGAATCGGAGCAAATTGACTTTTATGATCACTGAAGCTTCGTTGGGAGAACTAGGAACAGAG-----AAAAGAATGATAAA---TTAAAAA- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134385956 600 + 135778131 TACT-GCTGTAATTTATGTTGTGCTTAGACAAATTCCTGAGCTCTCTGTACCTAA-----TTTTTTT------TT-AATTAGGGAAAAAA---CACAGAAA---TAGCTT--ATGAGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCA---TAAGTATTTACTATCTCCT--------GGTGATTTTATTCTTGAAGAGCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCACTGCATACCAAATTCGACTATACATTGTATTTCTGTCACCGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAAGTAATTAAGGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGT-AAACACATAAGAATCGGAGCAAATTGACTTTCATGATCACTGAAGCTTCGTTGGGAGAACTAGGAACAGAG-----AAAAGAATGGTAAA---TTAAAAA- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 9948 602 + 1527111 TACTGGCTGTAATTTATGTTGTGCTTAGACAAATTCCTGAGCTCTCTGTACCTAA----TTTTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ACGAGCTTGCTTTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCA---TAAGTGTTTACTATCTCCT--------GGTGATTTGATTCTTGGAGAGCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAGGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAGGTAATTAAGGTCTTACTGACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCCCCA-----GGACT-ATTTACCATTGGC-AAACACATAAGAATCGGAGCAAATTGACTTTCATGATAACTGAAGCTTCGTTGGGAGAACTAGGAACAGAG-----AAAAGGATGATAAA---TTAAAAA- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 951772 601 + 2368649 TACCGGCTGTAATTTATGTTGTGCTTAGATAAATTCCTGAGCTCTCTGTACCTA-----TTTTTTTT------TT-AATTAGTGAAAAAA---CACAGAAA---TAGCTT--ATGAGCTTGCATTAAGAAAT-----AG--ATAAATAG-----AATATTATAT----T-----TTTAAACCTCATTATGCA---CAAGTATTTAATATCTACT--------GGTGATTTTGTTCTTGGAGACCATAGCAGGGGCCTTATGAGAAATGTAAATATGGTCATTGACCTATTGTGCTGGTGACAAAAGAAGATGAGTC--TTCTCTAAGAGACT-GGATTAGCTTGGCTGAAAATATTCATTGCATACCAAATTCGACTATACATTGTATTTCTGTCACTGAATGTTTTCCTTAGTTGTTTTGTGTGTAAAATAAATTGGATGTATGTTCAATGTGTATAATTCAGGAACCTTATTTCAAAAGTAATTAAGGTCTTACTCACTTGAGACCAGATAATTACAGTTAATGTAATCTTAAAAGAG--CCTCCA-----GGACT-ATTTGCCATTGGT-AAACACATAAGAATTGGAACAAATTGGCTTTCATGATCACTGAAGCTTCATTGGGAGAAGTAGGAACAGAG-----AAAAGAATGATAAA---TTAAAAA- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189691176 596 - 190850796 TACT-GCTGTGATTTATGTTGTGCTTA----AATTCCTGAGCTCTCTGTACCTA-----TTTTTTTT------TT-GATTAGGGAAGAAA---CACAGAAA---TAGCTT--ACGTGCTTGCTTTGAGAAAC-----AG--ATAAATGG-----TATATTATAT----G-----TTTAAACCTCATCATGCC---TAAGTAGTTAATATCTTCT--------GGTGATTTTATTCTTGTCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATAATTATTGACCTGTTGTGCTGGTGTCAGAAGCAGATGAATCCTTTCTCTAGGAGACT-GTGTTAGCTCAGCTGAAAATATTCACTGCATAGCTAATTAGACTATACATTGTATTTCTGTCACTGACTGTTTTGCTTAGTCATTTTGTGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGCAATTAAGGTCTTACTCACTTGAGA-CAGGTAATTACAGTTCATGGAATCTTAAAAGAGCACCCCCA-----GGACT-GTTTTCCATTTGT-AAACGCGTAAGAATTGGAACAAATTGACGTTCATGGTCGCTGAAGTTT--GTAGGAGAACTAGGAACATAG------AAAGAAAGATAAA---TGAAAAA- i calJac3.chr3 C 0 C 0 s saiBol1.JH378165 13180109 607 - 14256875 TGCTGGCTGTAATTTATGTTGTGCTTA----AACTCCTGAGCTCTCTGTACCTATTTTCTTTTTTTT------TT-AATTAGGGAAGAAT---CACAGAAA---TAGCTT--ACGTGGTTGCTTTGACAAAC-----AG--ATAAATGG-----AATATTATAT----T-----TTTCAACCTCATTATGCA---TAAGTATTTAATATCTTCT---------GTGATTTTATCCTTAGCAAGCATAGCAGGGGCCAGATGAGAAATGTAAATATAGTTATTGACCTGTTGTGCTGGTGACAAAAGCAGATGAGTCTTTTCTCTAGAAGACT-GTGTTAGCTCGGCTGAAAATATTCATTGCATACCAAATTAGACTATACATTGTACTTCTGTCACCGACTGTTTTCCTTAGTTGTTTTGTGAGTAAAATAAATTGGGTGTATGTTCAGTGTATATAATTTAGGCACCTTATTTCAAAAGTAATTAAGGTCTTAGTCACTTGAGA-CAGGTACTTACAGTTCATGGAATCTTAAAAGC-CCCCCCCACCCAGGGACT-GTGTTCCATTGGT-AAACACATAAGAATTGGAGCAAATTGACTTTCGTGGTCACTGAAGTTTCGTTAGGAGAACTAGGAGCAGAG------AAAGAATGAGAAA---TCAAAAA- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1074582 602 - 2196201 CACTGGCTGTAATTTTTGTTGTGCTTA----AATTCCTGAGCTCTCTGTACCttttttttttttttt------tt-AATTAGGGAAGAAA---CACAGAAA---TAGCTT--ACGTGGTTGCTTTGAGAAAC-----AG--ATAAATGG-----AATATTATAT----------TTTCAACTTCGTTACGCG---TAAGTGTTTAATATCTCCT--------GGTGATTTCATCCTTGGCGAGCATGGCA-GGGCCAGATGAGAAATGTAAATATAGTTATTGACCTGTTGTGCTGGTGACAAAGGCAGACGAGTCCTTTCTCTAGAAGACT-GTGTTAGCTCGGCTGAAAATATTCATTGCATACCAAATTAGACTATACACTGTATTTCTGTCACTGACTGTTTTCCTTAGTTGTTTTGTGAGTAAAATAAATTGGGTGTATGTTGAATGTATATAATTCAGGCTCCTTATTTCAAAAGTAATTAAGGTCTTACTCACTTGAGA-CAGGTAATTATAGGTCATGGAATCTTAAAAGAGCCCCCCCA-----GGACT-GTTTTCCATTGGT-AAACCCATAAGAATTGGAACAAATTGACTTTCATGGTCCCTGAAGTTTCGTTAGGGGAACTAGGAACAGAG------AAAGAATGATAAA---CCAAAAA- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3463932 595 - 5030052 CAGTGGCTGTAATTTACGTTGTGCTTA----AATTCCTGAGCTCTCTGTATCTA------TTTTTTT------TT-AATTAGGGAAGAAA---CACAGAAA---TAGCTT--ACATGCTTGCTTTGCGAAAC-----AG--ATAAATGG-----AATATTTTAT----T-----TTTAAACCTCATTATGCA---TAAGTATTTAATATCTTCT--------GGTGATTTTATTCTTGTCGAGCATAGCAGGGGCCATATGAGAAATGTAAATATAGTTATTGACCTGTTGTGCTGGTGACAAAAGCAGATGAATCCTTTCTCTAGGAGACT-GTATTAGCTCGGCTGAAAATATTCATTGCACACCAAATTAGACTATACATTGTATTTCTGTCACTGACTGTTTTGCTTAGTTGTTTTGCGAGTAAAATAAATTGGATGTATGTTCAATGTATATAATTCAGGCACCTTATTTCAAAAGTAATTAAGGTCTT----ACTTGAGA-CAGGTAATTACAGTTCATGGAATCTTAAAAGAGCCCCCCAA-----GGACG-GTTTTCCATTGGT-AAACGCATAAGAATTGGAACAAATTGACTTTCATGGTCGCTGAAGTTTCGTTAGGAGAACTAGGAACAGAG-----AAAAGAACGATAAA---TCAAAAA- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11296668 599 - 11315646 CAATAGCTATAATTTATGCTGTGTTTAACCCAATTCTTCAGCTCTCTGTGCCTAA--------TTTTAAAAAATT-AATAAGTGAAAAAA---CAGAAATAATTTAGCTT--ATGTAGTTGC-CTGAGAAAC-----AG--ATAAATGAAATGCAATATTACAT----T-----TTTAAACCTCATTATGCA---TAAGTATTTAATATCTACTTATGTATGGTTGATTTTATTCTTGGAGAACACAGCAAGGGCCATATGAGAAATGTAAATATAGTTATTGACCTATTGTGTCAGTGACAAAAGAAGATTAGCCTTTTCTCTAGGAGGCCGGGATTAGCTTGGTTGAAAATATTCATTGCATACCAAATTAGATTATACATTGTATTTCTGTCACTGAGTGTTTTCCTTAGTTTTTGTGTGAGTAAAATAAATTGGATGCAGGTTCAATGTATATAATTCAGGTATGTTCTTTCAAAAGTAATTAGGGTCTTACTCACTTGAGACTAGATAATTACATTTAATGTAATCTTAAAAGAG--CCCCCA-----GGAC-----------------------------CTGGAACAAATTGACTTTT-TGATCACTGAAGTTTAGTTAGGAGAATTAGGAACAGAGAAAGGAAAAGAATGATGTA---TCAAAAA- i otoGar3.GL873580 C 0 I 674 s mm10.chr8 86667733 606 - 129401213 TAGCTGTTGTGATTTGTAACATAATTAAGTGAGATCCTGAGTTC-CTATGCTTA---------TTTT------TT-AATTAGTGCAAATA----AAGGAAA---AAATTTAAATGTGCTTAGTCTGAGAAATATGTAAA--GTAAATAT-----AATGTTTCAT----T-----TTTGAAGAACATTAAGCATGGTAAGCG-TTGATATTTACT--------GGTGATTTTACTCTTGGAGTGCCTAGCGGGAGCCATATGAGAAATGTAAATATAGTTATTGACCTATTGTGCACTTAACAAAAGAAGATTAGTCTCTTCTCTAGGAGGCTGGGATTAGCTTTG-TGGAAGTAGTCACTGAATACCAAATTAGACCATACATTGTATTTCTGCCACTGAATGTTTTCCTTGCTTGCTGTGTGTATAAAACAAATTGAATGTAGACCCAATGTAGATCATTCAGGCCCATTCTTTCAAAAGTAATTAGGGTCTTACTCACTTGAGACCAGATAATTACATTTAATGTAATCTTAAAAGAG--CCCTCA----AGGATT-ACTCTCCCCTGGA-AAATACACAGGAGT-GGAACAAATTGACTTTC-TCATCTCTGAAATTT----AGGAGAAGGAGGCAGAGTG---GCAAAAGAAGGGAAAAGATTCAAAAA- i mm10.chr8 I 6673 C 0 s canFam3.chr16 17012668 603 - 59632846 CGCTAGTTGTAATTTATGTTTTGTttaggtgaattcctgagttctctgtacctaa-------atttc------tt-aattaatgaaaataattcatagtt----tagctt--atgtgcttgctttgaaaaac-----agatataaataa-----aatgtaatattacat-----ttaaaaccacattatgcatggtaagTATGTCCTATCTACT--------GGTGAGTTTATTACTAGAGAACAAAGCAGGTGCCA-ATGAGGAATGTAAATATAGTTATTGACTTACTGTGTCAGTGACAA---AAGATGTCTT-TTTTTCCAGGAGGTTGGAATTAGCCTTGCTGAAAATATTCATTCCATACCAAATTAGACCACACATTGTATTTCTGTCACTGAATGTTTTCCTTGGTGGTTGTCTGAGTAAAACAAATTGGATGTAGGTTCAAGGTACATCATTCAGGCACCTTCTTTCAAAAGTAATTAGGGTCTTACTCACTTGAAACCAGATAATTACATTTAATGTAATCTTAAAAGAG--CCCCCA----AGGATT-GTTTTCCATTGGT-AAATGAATAAGAAGTGGAACAAATTGACTTTCATGATCACTAAAGTTT----AGAAGAAGTAGGA--AGAG-----AAAATAATGTTGAA---TCTAAAA- i canFam3.chr16 C 0 I 1 s dasNov3.JH570353 1522550 594 - 2520184 CACTGATTGTAATTTATGCTAAGTTTAGGTGAGTTCCTGAGTTCTCTGGGACTAA-------ATTTC------TT-CATAAGTTAATGAA---AACAGAAA---TCACTT--ACATGCTTGCCTTGAGTAAT-----AA--ATACATGA-----AATGTAACAT----TTCGTCTTTAAAC-----TACAGG---TAAGTATTTAATATCTCCT--------GGTTATTTTCTTCTTGGAGACCGTAACAGGTGCCATATGAAAGCTGTAAGCA--GTTAGTGACCTATCTAATCAG-----ACAGAAGGTGATTGTTTCCTCTGGGAGGCTGGGATTAGCCTTCCTGAAAAGAACCATCGCATACCAAATTAGACTACACATTGTATTTCTGTCACTCAATGTTTTTCTTGGTTGTTGTTTGAGTAAAACAAATTGGATGTAAGTTCCAAGTACATCACTCAGGCACCTTCTTTCCAAAGTGATTAGGGTCTAACTCACTTGAAGGCAGATTATTACACTTAACGTAATCTTGAAAGAG--CCCCTG-----AGGCTCGCTCTCCTTGGGTGAAACACATAAGAAGTGGCACAAATGGGCTTTCCTGACCCCTGAACTCACA----GACAACTAGGACCAGTG-----ACAAGAGTGAGAAA---TCCGAACA i dasNov3.JH570353 C 0 C 0 a score=343636.000000 s hg38.chr4_KI270789v1_alt 200265 30 + 205944 TTCGTCTCCTAAGACTGATGAAGATAACAT-------- s panTro5.chr4 192985200 30 + 194502333 TTCATCTCCTAAGACTGATGAAGATAACAT-------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869633 30 + 195804263 TTCATCTCCTAAGACTGATGAAGATAACAT-------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901852 30 + 4876863 TTTGTCTCCTAAGACTGATGAAGATAATAT-------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795638 30 + 115148730 TTCGTCTCCTAAGACTGATGAAGATAACAC-------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066136 30 + 190429646 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188009753 30 + 189454096 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400160 30 - 25927173 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430488 30 + 4669795 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386556 30 + 135778131 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10550 30 + 1527111 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952373 30 + 2368649 TTAGTCTCCTAAGACTGATGAAGATAACAT-------- i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189691772 30 - 190850796 TTAGTCTCCCGAGACCGATGACAATAACAT-------- i calJac3.chr3 C 0 I 4 s saiBol1.JH378165 13180716 30 - 14256875 TTAGTCTCCGGAGACCGATGACAATAACAT-------- i saiBol1.JH378165 C 0 I 4 s cebCap1.NW_016107886v1 1075184 30 - 2196201 TTAGTGTCCTGAGACCGATGACAATAACAT-------- i cebCap1.NW_016107886v1 C 0 I 735 s aotNan1.NW_018492112v1 3464527 30 - 5030052 TTAGTCTCCCGAGACCGATGACAATAACAT-------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11297941 29 - 11315646 TTAGTCTCCTAAGACTGATAAGGAAAAAA--------- i otoGar3.GL873580 I 674 C 0 s mm10.chr8 86668339 29 - 129401213 TTCATCTCATATCACTGAGAAAGATAAAA--------- i mm10.chr8 C 0 C 0 s canFam3.chr16 17013272 30 - 59632846 GTAGTCTCATAAGACTCATAAAGGTAAAAT-------- i canFam3.chr16 I 1 C 0 s dasNov3.JH570353 1523144 38 - 2520184 CCTGGCTTTTAAGAATGATGAAGGTGAAAGGAGAACAC i dasNov3.JH570353 C 0 C 0 a score=367203.000000 s hg38.chr4_KI270789v1_alt 200295 44 + 205944 ATATA------TTTTTTCATTTACTCTTAGA-CAACCCTTACAAGATTTTT s panTro5.chr4 192985230 45 + 194502333 ATATAT-----TTTTTTCATTTACTCTTAGA-CAACCCTTACAAGATTTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869663 44 + 195804263 ATATA------TTTTTTCATTTACTCTTAGA-CAACCCTTACAAGATTTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901882 45 + 4876863 ATATAT-----TTTTTTCATTTACTCTTAGA-CAACCCTTACAAGATTTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795668 45 + 115148730 ATATAT-----TTTTTTCATTTACTCTTAGA-CAACCCTTACAAGATTTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066166 45 + 190429646 ATATAT-----TCTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188009783 45 + 189454096 ATATAT-----TCTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400190 45 - 25927173 ATATAT-----TCTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430518 45 + 4669795 ATATAT-----TCTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386586 45 + 135778131 ATATAT-----TCTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10580 44 + 1527111 ATATAT-----T-TTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952403 45 + 2368649 ATATAT-----TTTTTTCATTTACTCTTAGA-CAACACTTACAAGATTTTT i colAng1.NW_012116221v1 C 0 C 0 s calJac3.chr3 189691806 37 - 190850796 --ATAT-----TTTTTTCAT------TTAGA-CAATCCTTACAATAttttt i calJac3.chr3 I 4 N 0 s saiBol1.JH378165 13180750 42 - 14256875 --ATATATATATATTCTCAT------TTAGA-CAACTCTTACAAgtttgtt i saiBol1.JH378165 I 4 I 231 s aotNan1.NW_018492112v1 3464557 37 - 5030052 --ATAT-----TTTTTTCAT------TTAGA-CAACCCTAACAAGATTttt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11297970 41 - 11315646 ATATAT-----ATTTCCCA----CTCTCACA-TAGCCTTTAAAGGATTTTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668368 33 - 129401213 --ATAT-----GGTTT----------GTACC-CAATGCATAATGGACTTTG i mm10.chr8 C 0 C 0 s canFam3.chr16 17013302 43 - 59632846 --ATAT-----TTTTTCCATTTATTTTCATG-AAACCCTCAAGGGATTTTT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523182 42 - 2520184 ----GT-----GAGTTTCCTTTACTGTCACAGCAAACCTCTAGAGGTTTTT i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I a score=11504.000000 s hg38.chr4_KI270789v1_alt 200339 1 + 205944 G s panTro5.chr4 192985275 1 + 194502333 G i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869707 1 + 195804263 G i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901927 1 + 4876863 G i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795713 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066211 1 + 190429646 G i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188009828 1 + 189454096 G i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400235 1 - 25927173 G i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430563 1 + 4669795 G i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386631 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10624 1 + 1527111 G i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952448 1 + 2368649 G i colAng1.NW_012116221v1 C 0 C 0 s aotNan1.NW_018492112v1 3464594 1 - 5030052 g i aotNan1.NW_018492112v1 C 0 I 508 s otoGar3.GL873580 11298011 1 - 11315646 G i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668401 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 17013345 1 - 59632846 G i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523224 1 - 2520184 G i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I e saiBol1.JH378165 13180792 231 - 14256875 I a score=1137018.000000 s hg38.chr4_KI270789v1_alt 200340 202 + 205944 CCCAGCGAAAGTGG----CACGTGGAACATG-GAATGACATTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGACTACACCCCTGTGTAGTCCCACACAGGCTACCCC----AGACCAGCCTGG-CGGGCTCTGCACTAGGCCTCCCATCAG---GCGAGAGC----CAACGCTCCTCAGCCCGGCTCCACCTCATTCA-GAAG-AAAGTGTGTCTCCC s panTro5.chr4 192985276 202 + 194502333 CCCAGTGAAAGTGG----CACGTGGAACATG-GAATGACATTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGACTACACCCCTGTGTAGTCCCACACAGGCTACCCC----AGACCAGCCTGG-CTGGCTCTACACTAGGCCTCCCATCAG---GCGAGAGC----CAACGCTCCTCAGCCCGGCTCCACCTCATTCA-GAAG-AAAGTGTGTCTCCC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869708 202 + 195804263 CCCAGTGAAAGTGG----CACGTGGAACATG-GAATGACATTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGACTACACCCCTGTGTAGTCCCACACAGGCTACCCC----AGACCAGCCTGG-CTGGCTCTACACTAGGCCTCCCATCAG---GCGAGAGC----CAACGCTTCTCAGCCCGGCTCCACCTCATTCA-GAAG-AAAGTGTGTCTCCC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3901928 201 + 4876863 CCCAGCGAAAGTGG----CACGTGGAACATG-GAATGACATTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGTCC-CACCCCGCTGGCTCCTCACACAGGCTACCCC----AGACCAGCCTGG-CGGGCTCTGCACTAGGCCTCCCATCAG---GCGAGAGC----CAACGCTCCTCAGCCCGGCTCCACCTCATTCA-GAAG-AAAGTGTGTCTCCC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795714 201 + 115148730 CCCAGTGAAAGTGG----CATGTGGACCATG-GAATGATGTTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGTCC-CAGCCCGCTGGCTCCTCACACAGGCTACCCC----AGACCAGCCTGG-CTGGCTCTACACTAGGCCTCCCATCAG---GCGAGAGC----CAACGCTCCTCAGCCTGGCTCCACCTCATTCA-GAAG-AAAGTGTGTCTCCC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066212 201 + 190429646 CCCAGTGAAAGTGG----CACGTGGAACATG-GAATGATGTTTCATAAAGATAAATCCAGAGATGAGTGCTGAAGTCC-CACCCCGCTGGCCCCTCACACGGGCTCCCCT----AGGCCAGCCTGA-CTAGCTCTACCCTCGGCCTGCAATCAG---GCGAGAGC----CAGCGCTCCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188009829 201 + 189454096 CCCGGTGAAAGTGG----CACGTGGAACATG-GAATGATGTTTCATAAAGATAAATCCAGAGATGAGTGCTGAAGTCC-CACCCCGCTGGCCCCTCACACGGGCTCCCCT----AGGCCAGCCTGA-CTAGCTCTACCCTCGGCCTGCAATCAG---GCGAGAGC----CAGCGCTGCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400236 201 - 25927173 CCCAGTGAAAGTGG----CACATGGAACATG-GAATAATGTTTCATAAAGATAAATCCAGAGATGAGTGCTGAAGTGC-CACCCCGCTGGCTCCTCACACGGGCTCCCCT----AGGCCAGCCTGA-CTAGCTCTACCCTCGGCCTGCAATCAG---GCGAGAGC----CAGCGCTCCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430564 201 + 4669795 CCCAGTGAAAGTGG----CACGTGGAACATG-GAATGATGTTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGTCC-CACCCCGCTGGCTCCTCACACGGGCTACCCT----AGGCCAGCCTGA-CTAGCTCTACCCTCGGCCTGCAATCAG---GCGAGAGC----CAGTGCTCCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386632 201 + 135778131 CCCAGTGAAAGTGG----CACGTGGAACACG-GAATGATGTTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGTCC-CACCCTGCTGGCTCCTCACACAGGCTACCCT----AGACCAGCCTGA-CTAGCTCTACCCTGGGCCTGCAATGAG---GCGAGAGC----CAGCGCTCCTCAGCCCGGCGGCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10625 201 + 1527111 CCCAGTGAAAGTGG----CACGTGGAACATG-GAATGATGTTTCATAAAGATAAATCCAGAGATGAGTGCTGAAGTCC-CACCCCGCTGGCTCCTCACACGGGCTACCCT----AGGCCAGCCTGA-CTAGCTCTACCCTCGGCCTGCAATCAG---GCGAGAGC----CAGCGCTCCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952449 201 + 2368649 CCCAGTGAAAGTGG----CACGTGGTACATG-GGATGATGTTTCATAAAGATAAATCCAGAGATTAGTGCTGAAGTCC-CACCCTGCTGGCTCCTCACACAGGCTACCCT----AGACCAGCCTGA-CTGGCTCTACCCTAGGCCTGCAATCAG---GCGAGAGC----CAACGCTCCTCAGCCCGGCGCCACCTCATGCA-GAAG-AAAGTGTGTCTCCA i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11298012 202 - 11315646 TCAAGGGAAGGTGGTGCCCACACCAAACAT--GAGGGGTACTCCTTAAAGATGAACCCAAACATCAGTGCTGACCTC--CAGCCAAGTG-------ACACATGTCATACTTGAGCGACTGGCTGGC-CTGGCTCTGGGTTAGACCCTCAACCAGAAAGGGGTAGG----CAGTGCCCATCAGCCTGGCTCCAGTTCATTCA-GAA--AACATGCATCTCTG i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668402 196 - 129401213 ACCAATGAAAGTGG----TGAG-GGGGTATGTAGATAATATTTC---------AATCCAATAATTAGTGCTTAACCCC-AGCTCTGCTGACTGGTCACACAGGTGACTTT----TGGCCAGCTTAACCTGTCTGTACAATTACATTCTCACCAG---AGGAGGGCT--GCATCTACTGTCTGTCTGGCTTGAATTCACTCACAAAG-AAAGTGTACATCTG i mm10.chr8 C 0 C 0 s canFam3.chr16 17013346 158 - 59632846 TCCTGTGAAAGTAG----TACATAGCACATA-GAAGGAAATTCCACAAAGACTCATTTAGTGATT-------------------------------------------------AGCTCAGC-----ATGGTTCCACACTAGACCTCCAATCAA---ATGAGAGCTAGACAACATTCATCCCCGTGGCTTCAATTCATTCA-GAAATAAAGTATATCTTTG i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523225 101 - 2520184 CCCG-----AGCGT----CGCACGGCACGTG-GCAGGGTGCGCCACGAAGGC---------------------------------------------CACAGGAAGGTCA----GGGCCAGCCCCA-------------------------------GGGGCTGC----TAGCCCCCTGCAGCC---------CCCGTGCA-GCC---------------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I e aotNan1.NW_018492112v1 3464595 508 - 5030052 I e saiBol1.JH378165 13180792 231 - 14256875 I a score=273139.000000 s hg38.chr4_KI270789v1_alt 200542 56 + 205944 GGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTC---GCT s panTro5.chr4 192985478 56 + 194502333 GGCCTCACATTGCGCTGAATGTAAGGATACCGAGATAAACCAGGCTTTCCTTC---GCT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869910 56 + 195804263 GGCCTCACATTGCGCTGAATGTAAGGATACCGAGATAAACCAGGCTTTCCTTC---GCT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902129 57 + 4876863 GGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTC--GGCT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795915 56 + 115148730 GGCCTCA-ATTGCACTGAATGCAAGGATACCAAGATAAACCAGGGTTTCCTTC--GGCT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066413 57 + 190429646 GGCCTCACACTGCGCTGAATGTAAGGATAGGGAGAT-AACCAGGCTTTCCTTCC-GACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010030 57 + 189454096 GGCCTCACACTGCGCTGAATGTAGGGATAGGGAGAT-AACCAGGCTTTCCTTCC-GACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400437 57 - 25927173 GGCCTCACACTGCGCTGAATGTAAGGATAGGGAGAT-AACCAGGCTTTCCTTCC-GACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430765 57 + 4669795 GGCCTCACACTGCGCTGAATGTAAGGACACCGAGAT-AACCAGGCTTTCCTTCC-GACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386833 57 + 135778131 GGCCTCACACTGCGCTGAATGTAAGGACACCGAGAT-AACCAGGCTTTCCTTCC-GACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10826 57 + 1527111 GGCCTCACACTGCGCTGAATGTAAGGACACCGAGAT-AACCAGGCTTTCCTTCC-GACT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952650 57 + 2368649 GGCCTCACTCCGTGCTGAATGTAAGGACACCGAGAT-AACCAGGCTTTCCTTCT-GACT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181023 57 - 14256875 GGCCTCAC--CGCGCAGAGCGTAGGGACCCCAGGACGCAGGAGGCCCTCCTTCAGGACC i saiBol1.JH378165 I 231 C 0 s otoGar3.GL873580 11298214 45 - 11315646 GGCATCAC--TGGGCCAAGTGTTGGAAGATCAAGAGAAGAGAA------------ACAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668598 59 - 129401213 GGCTTAATATTGTGTTAAATGCCAGGATAGCAGCATAAACTAGACATTACTGCCTGACA i mm10.chr8 C 0 C 0 s canFam3.chr16 17013504 57 - 59632846 GGTATCCCATTGTGCTCCATACTAGTACCCCAAGAT-AATAAGGCTTCACTCCT-CACT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523326 23 - 2520184 GGGCTC----CGCGCTCACTGCCCGCT-------------------------------- i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I e aotNan1.NW_018492112v1 3464595 508 - 5030052 I a score=150974.000000 s hg38.chr4_KI270789v1_alt 200598 19 + 205944 CAGAGTACAGTTGCAGACT s panTro5.chr4 192985534 19 + 194502333 CAGAGTACAGTTGCAGACT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869966 19 + 195804263 CAGAGTACAGTTGCAGACT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902186 19 + 4876863 CAGAGTACAGTTGCAGACT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795971 19 + 115148730 CAGAGTACAGTTGCAGACT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066470 19 + 190429646 CAGAGTACAGATGCAGACT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010087 19 + 189454096 CAGAGTACAGATGCAGACT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400494 19 - 25927173 CAGAGTACAGATGCAGACT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430822 19 + 4669795 CAGAGTACAGACGCAGACT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386890 19 + 135778131 CAGAGTACAGACGCAGACT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10883 19 + 1527111 CAGAGCACAGACGCAGACT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952707 19 + 2368649 CAGAGTACGGTTGCAGACT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181080 18 - 14256875 CAGGGTTTAG-TGCAGACT i saiBol1.JH378165 C 0 C 0 s otoGar3.GL873580 11298259 19 - 11315646 CAGAATGTTGTTACAGACT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668657 19 - 129401213 CAAATTGTAGTTCCAGATT i mm10.chr8 C 0 C 0 s canFam3.chr16 17013561 19 - 59632846 CAAAATATAGTTGGAGACT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I e dasNov3.JH570353 1523349 0 - 2520184 C e aotNan1.NW_018492112v1 3464595 508 - 5030052 I a score=773961.000000 s hg38.chr4_KI270789v1_alt 200617 109 + 205944 TGGTAATGACTGAGCCAAGCCAGACTGACTGTGATAAGATAATAAATTAACTACC-AGTCAG-GAGCTAAGTCAGCAGATGTGCGAACATTTTAGAGGTAACATCAT--AAAC s panTro5.chr4 192985553 109 + 194502333 TGGTAATGACTGAGCCAAGCCAGACTGACTGTGATAAGATAATAAATTAACTACC-AGTCAG-GAGCTAAGTCAGCAGATGTGCAAACATTTTAGAGGTAACATCAT--AAAC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192869985 109 + 195804263 TGGTAATGACTGAGCCAAGCCAGACTGACTGTGATAAGATAATAAATTAACTACC-AGTCAG-GAGCTAAGTCAGCAGATGTGCAAACATTTTAGAGGTAACATCAT--AAAC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902205 110 + 4876863 TGGTAATGACTGAGCCAAGCCAGACTGAGTGTGATAAGATAATAAATTAACTACC-AGTCAG-GAGCTAAGTCAGCAGATGTGCAAACATTTTAGAGGTAACATCAT-AAAAC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112795990 110 + 115148730 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAATAAGATAATAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGGTATGCAAACATTTTAGAGGTAACATCAT-GAAAC i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066489 97 + 190429646 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCA--GAACTAAGTCAGCAGACATGCAAACAT------------GTCAT-AAAAC i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010106 97 + 189454096 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCA--GAACTAAGTCAGCAGACATGCAAACAT------------GTCGT-AAAAC i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400513 98 - 25927173 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGACATGCAAACAT------------GTCGT-AAAAC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430841 98 + 4669795 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGACATGCAAACAT------------GTCAT-AAAAC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134386909 98 + 135778131 CGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGACATGCAAACAT------------GTGGT-AAAAC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 10902 98 + 1527111 CAGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGACATGCAGACAT------------GTCAT-AAAAC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952726 98 + 2368649 TGGTAATGACTGAGCCAAGCCAGACTGACTGTAGTAAGATAAGAAATTAACTACC-AGTCAG-GAACTAAGTCAGCAGACATGCAAACAT------------GTCAT-AAAAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181098 96 - 14256875 -GCTCATGACCGAGCT-GGCTAGACCGACTGCCGTAAGACAGCGAATTAACTACC-AGTCAG-GACCTAGGCCAGCAGACATGCCAGAAT------------GTCCA-AAAAC i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3465103 103 - 5030052 TGGTAATGACCGAGCC-AGCCAGACTGACTGTAATAAGATAGTAAATTAACTACC-AGTCAG-GAACTAAGTTAGCAGATATGCCAGAATTTTAGC------ATCAA-AAAAC i aotNan1.NW_018492112v1 I 508 C 0 s otoGar3.GL873580 11298278 111 - 11315646 CCGTAACATCTGAGCTGACCCAAGCTGACTGTAAGGGGATAGTGAATTAATTTCC-AGGCAGAAAACTAAGTCTGTAGACACATAGAAACTTCAGGAGTAACATCAC-AAAAC i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668676 108 - 129401213 CAGTAACTTGTGATCAAGACCGAAGTGACAGTAATAGAATAATAAATTTTCTGCCAAGCCAG-AAACTGAGT----AAATACACAAAAAGTTTGGGATCCGTGTCATTAACAC i mm10.chr8 C 0 C 0 s canFam3.chr16 17013580 104 - 59632846 ----TGTTACTGACTCAAACCAGGCCAACTATAATGAGAAAATAAATAAACTACCAAGCCAA-GAAGTAGATTAGTAGATACACAAAGATTTTAGGAGT---AACAT-AAAAT i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I e dasNov3.JH570353 1523349 0 - 2520184 C a score=543610.000000 s hg38.chr4_KI270789v1_alt 200726 58 + 205944 TAGAACAGAGGAGCTCTT---GGGAAGAAAAA-----GGGCTTGGAAATTATACCTGGAAAGATAC s panTro5.chr4 192985662 58 + 194502333 TAGAACAGAGGAGCTCTT---GGGAAGAAAAA-----AGGCTTGGAAATTATACCTGGAAAGATAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870094 58 + 195804263 TAGAACAGAGGAGCTCTT---GGGAAGAAAAA-----AGGCTTGGAAATTATACCTGGAAAGATAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902315 58 + 4876863 TAGAACAGAGGAGCTCTT---GGGAAGAAAAA-----AGGCTTGGAAATTATACCTGGAAAGATAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796100 58 + 115148730 TAGAACAGAGGAGGTCTT---GGGAAGAAAAA-----AGGCTTGGAAATGATACCTGGAAAGATAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066586 58 + 190429646 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010203 58 + 189454096 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400611 58 - 25927173 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430939 58 + 4669795 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387007 58 + 135778131 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11000 58 + 1527111 TAGAACAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGTATTATACCTGGAAAGATGT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952824 58 + 2368649 TAGAGCAGAGTTGGTCTT---GGGGAGAAAAA-----AGGCTTGGGAATTATACCTGGAAAGATAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181194 57 - 14256875 CAGAACAGGGCAGATCTG---GGGGAGAAAAA------GGCTTGGAAATTGTGACTGGCATGATAT i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3465206 57 - 5030052 TAGAACAGAGGAGATCTT---GGGGAGAAAAA------GCCTTGGAAATTGTAGCTGGCATGATAT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298389 58 - 11315646 TAGAACAGAAGAGGTCTT---AGAAAAAAAAA-----AAGCTTGGGAATTATAAATGGACAGACAT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86668784 63 - 129401213 TAGAACTGAAGAGATCAT---GAAGTCAAAAAGAGCAAAGTTTGGGAGTTATATACAGACAGATAT i mm10.chr8 C 0 C 0 s canFam3.chr16 17013684 60 - 59632846 TAGAATGGAGGAGGTCTTGTAGGGGGAAAAAA-----GGATTTGGTAATTATAAATGGGCAGAAA- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523349 58 - 2520184 TAGGCCGGAAGAGGCTTT---GGCGGGAAACG-----AGGCTCGGGAATTGTAAGTGGAGAGATGC i dasNov3.JH570353 C 0 C 0 e cebCap1.NW_016107886v1 1075214 735 - 2196201 I a score=338010.000000 s hg38.chr4_KI270789v1_alt 200784 36 + 205944 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- s panTro5.chr4 192985720 36 + 194502333 TGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870152 36 + 195804263 TGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902373 35 + 4876863 TGC---TAATAATGATCAAGAAG-AAAAACAAATCCAGT---- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796158 36 + 115148730 TGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066644 36 + 190429646 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010261 36 + 189454096 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400669 36 - 25927173 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3430997 36 + 4669795 CAC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387065 36 + 135778131 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11058 36 + 1527111 CGC---TAATAATGATCAAGAAGAAAAAACAAATCCAGT---- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952882 36 + 2368649 TGC---TAATAATGATCGAGAAGAAAAAACAAATCCAGT---- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181251 36 - 14256875 CGC---TAACAGTGATGGAGGAGAAAAGACAAAGCCAAT---- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1075949 36 - 2196201 CGC---TAACGATGATCCAGAAGAAAAGACAAATCCAGT---- i cebCap1.NW_016107886v1 I 735 C 0 s aotNan1.NW_018492112v1 3465263 36 - 5030052 CGC---TAAAAATGATCAAGAAGAAAAGACAAATCCAGT---- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298447 39 - 11315646 TGCAAATAATGATGATAAAGAAGGAAAAACAAATCTGGT---- i otoGar3.GL873580 C 0 I 142 s mm10.chr8 86668847 25 - 129401213 --------ATAGAGATTAAGAAAA------AAGTTCAGT---- i mm10.chr8 C 0 I 5 s canFam3.chr16 17013744 30 - 59632846 TGC---TATTAATGAT--AAAAATTTCAACAATTT-------- i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523407 30 - 2520184 TGT---TAATAAT----------AGGAAAAAAGCCCAGTATAT i dasNov3.JH570353 C 0 C 0 a score=194058.000000 s hg38.chr4_KI270789v1_alt 200820 25 + 205944 TTGGAAGTGAGCAATCATTTATGAT s panTro5.chr4 192985756 25 + 194502333 TTGGAAGTGGGCAATCATTTATGAT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870188 25 + 195804263 TTGGAAGTGGGCAATCATTTATGAT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902408 25 + 4876863 TTGGAAGTGAGCAGTCATTTATGAT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796194 25 + 115148730 TTGGAAGTGAGCAATCATTTATGAT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066680 25 + 190429646 TTGGAAGTGAGAGATCATTTATGAT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010297 25 + 189454096 TTGGAAGTGAGAGATCATTTATGAT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400705 25 - 25927173 TTGGAAGTGAGCGATCATTTATGAT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431033 25 + 4669795 TTGGAAGTGAGTGATCATTTATGAT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387101 25 + 135778131 TTGGAAGTGAGCGATCATTTATGAT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11094 25 + 1527111 TTGGAAGTGAGCGATCATTTATGAT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952918 25 + 2368649 TTGGAAGTGAGTGATCATTTACGAT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181287 24 - 14256875 TT-GAAGGGAGTGCTCATTTATAAT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1075985 24 - 2196201 TT-GAAGTGCGTGCTCGTTTATGAT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465299 24 - 5030052 TT-GAAGTGAGTGCTCATTTATGAC i aotNan1.NW_018492112v1 C 0 C 0 s mm10.chr8 86668877 19 - 129401213 CTAGAAGTGATTTTTCAAT------ i mm10.chr8 I 5 C 0 s canFam3.chr16 17013774 25 - 59632846 TTAGAACTGAGCATCTTTCTCCTAT i canFam3.chr16 C 0 C 0 s dasNov3.JH570353 1523437 24 - 2520184 TTGGAAGTGAACAATTGTCCCTAT- i dasNov3.JH570353 C 0 C 0 e otoGar3.GL873580 11298486 142 - 11315646 I a score=555922.000000 s hg38.chr4_KI270789v1_alt 200845 50 + 205944 GTAAAATATTTCTTAGAAATGGAATCTAGATAATGCTTGGAATATGCTTT s panTro5.chr4 192985781 50 + 194502333 GTAAAATATTTCTTAGAAATGGAATCTAGATAATGCTTGGAATATGCTTT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870213 50 + 195804263 GTAAAATATTTCTTAGAAATGGAATCTAGATAATGCTTGGAATATGCTTT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902433 50 + 4876863 GTAAAATATTTCTTAGAAATGCAACCTAGATAATGCTTGGAATATGCTTT i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796219 50 + 115148730 GTAAAATGTTTCTTAGAAATGGAGTCTAGATAGTGCTTGGAATATGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066705 50 + 190429646 GTAAAATATTTCTTAGAAATAGAATCTAGAGAATGCTTGGAATATGCTTT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010322 50 + 189454096 GTAAAATATTTCTTAGAAATAGAATCTAGAGAATGCTTGGAATATGCTTT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400730 50 - 25927173 GTAAAATATTTCTTAGAAATAGAATCTAGAGAATGCTTGGAATATGCTTT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431058 50 + 4669795 GTAAAATATTTCTTAGAAATAGAATCTAGAGAATGCTTGGAATATGCTTT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387126 50 + 135778131 GTAAAATATTTCTTAGAAATAGAATCTAGATAATGCTTGGAATATGCTTT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11119 50 + 1527111 GTAAAATATTTCTTAGAAATAGAATCTAGAGAATGCTTGGAGTATGCTTT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952943 50 + 2368649 GTAAAATATTTCTTAGAAATAGAATCTAGATAATGCTTGAAATATGCTTT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181311 50 - 14256875 GAAAAATATTCCTTAAAAATGGAATCTAGACAATGTTTGGAAGATGCTTT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076009 50 - 2196201 GAACGATATTCCTTAAAAATGGAATGTAGACAATGTTTGGAATATGCTTT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465323 50 - 5030052 GAAAAATATTTCTTAAAAATGGAATCTAGACAATGTTTGGAATATGCTTT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298628 50 - 11315646 ATAAAATATTTCATAGACATTGAATCTACATAAAGTTCAGCCCACACTTT i otoGar3.GL873580 I 142 C 0 s mm10.chr8 86668896 50 - 129401213 GTAAACTACGTCTGAGGAATTAACTCCAGACAGTATTTTATAAATGCTTT i mm10.chr8 C 0 I 227 s canFam3.chr16 17013799 49 - 59632846 TTCAAGTATTTC-TAGAAAATGAATCTAGATGCAGTTCTAAGTATGTTTT i canFam3.chr16 C 0 I 7 s dasNov3.JH570353 1523461 50 - 2520184 TTGAAATATTTCTTAGAAATTCAATTTAGATAAAGTTTGGAACAAGCTTT i dasNov3.JH570353 C 0 C 0 a score=450421.000000 s hg38.chr4_KI270789v1_alt 200895 61 + 205944 AAACTA--------------CCTATATTTAATTTGTTTTTCTTGTGATTTTTGTATTGTTTGGTGTAAAA--TA------ATC s panTro5.chr4 192985831 56 + 194502333 AAACTA--------------CCTATATTTAATTTGTTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA------------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870263 56 + 195804263 AAACTA--------------CCTATATTTAATTTGTTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA------------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902483 61 + 4876863 AAACTA--------------CCTATATTTAATTTGTTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA--TA------ATC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796269 56 + 115148730 AAACTA--------------CTTATATTTAATTTGTTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA------------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066755 52 + 190429646 AAACTA--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTCGTGTAAAA------------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010372 52 + 189454096 AAACTA--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTCGTGTAAAA------------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400780 57 - 25927173 AAACTA--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA--TA------ATC i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431108 57 + 4669795 AAACTA--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA--TA------ATC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387176 57 + 135778131 AAACTA--------------CCTATATTTAA----TTTTTCTCATGATTTCTGTATTGTTTGGTGTAAAA--TA------ATC i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11169 57 + 1527111 AAACTA--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTGGTATAAAA--TA------ATC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 952993 57 + 2368649 AAACTT--------------CCTATATTTAA----TTTTTCTTGTGATTTCTGTATTGTTTGGTGTAAAA--TA------ATC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181361 63 - 14256875 AAACTA--------------CCTATATTCATTTTGTTTTTCTTGTGATTTCTGTGTTGTTTGGTGTAAAAAAAA------ATC i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076059 63 - 2196201 AAACTA--------------CCTATATTCGATTTGTTTTTCTTGTGATTTCTTTGTTGTTTGGTGTAAAAAGAA------ATC i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465373 61 - 5030052 AAACTA--------------CCTATATTCAATTTGTTTTTCTTGTGATTTCTGTGTTGTTTGGTGTAAAA--AA------ATC i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298678 70 - 11315646 AAACTACAAATG-CAAAAATCCTATATTTAATTTGCTTTTCTTTT----------TTGTTTTGTGTAAAG--AAAAATCTATT i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17013855 60 - 59632846 AGAACA--------------ATTACATTTAATTGATTTTTCTTATTATTTTTCTA-TGTTCAGTATAAGA--AA------ATA i canFam3.chr16 I 7 I 7 s dasNov3.JH570353 1523511 74 - 2520184 AAGCCATAAAAGATGGATATTCTACCTTTAGT---TTTTAGTTACGGTTTCTCTACTGCTTTGCATGAGCAGAA------ATC i dasNov3.JH570353 C 0 C 0 e mm10.chr8 86668946 227 - 129401213 I a score=464628.000000 s hg38.chr4_KI270789v1_alt 200956 48 + 205944 TTAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTTAC-TGATA-----------------------------------TGAG s panTro5.chr4 192985887 47 + 194502333 -TAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTTAC-TGATA-----------------------------------TGAG i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870319 47 + 195804263 -TAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTTAC-TGATA-----------------------------------TGAG i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902544 48 + 4876863 TTAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTTAG-TGATA-----------------------------------TGAG i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796325 47 + 115148730 -TAATCTTTCCAG---------GTTG----TGTCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066807 47 + 190429646 -TAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010424 47 + 189454096 -TAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400837 48 - 25927173 TTAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431165 48 + 4669795 TTAATCTTTCCAG---------GTGG----TGTCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387233 48 + 135778131 TTAATCTTTCCAG---------GTGG----TGTCCAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11226 48 + 1527111 TTAATCTTTCCAG---------GTGG----TATCTAATTA---AGGCACATTCAG-TGATA-----------------------------------TGAG i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953050 48 + 2368649 TTAATCTTTCCAG---------GTGG----TGTCTAACTA---AGGCACATTCAG-TGATA-----------------------------------GGAG i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181424 48 - 14256875 TTAACCTTTCCAG---------GTGG----TGTCTAATTA---AGTCACATTCTA-TGATA-----------------------------------TACT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076122 48 - 2196201 TTAATCTTTCCTG---------GTGG----TGTCTAATTA---AGTCACACTCTA-TGATA-----------------------------------TGCT i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465434 47 - 5030052 TTAACCTTTCTAG---------GTGG----TGTCTAATTA---AGTCACGTTCTA--GATA-----------------------------------TGCT i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298748 56 - 11315646 TTTATCTTTTTAG---------GTGGGTGCTATTTAATTATTGAGTCACATTCAGATGAGA-----------------------------------TGTT i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86669173 48 - 129401213 TTAATCTTTCTAT---------GTGG----TGTCTGACTA---AGATACATTCAA-GGGCA-----------------------------------AGTT i mm10.chr8 I 227 C 0 s canFam3.chr16 17013922 92 - 59632846 TGAATCACTTCAATGTCTAATTGAAG----TGTCTAATTA---AGTCACATTCAA-TAATGTTTCAGTCTTggggtgcctgggtggctcagttggttgag i canFam3.chr16 I 7 I 174 s dasNov3.JH570353 1523585 47 - 2520184 TTAATCACCCCCG---------TTTG----TATCTAATTA---AGCCAC-TTTGT-AGGTG-----------------------------------TGTT i dasNov3.JH570353 C 0 C 0 a score=452365.000000 s hg38.chr4_KI270789v1_alt 201004 50 + 205944 TCATTTTCTAAATATACTTTATCTAA------GAAAAT----------TTAAAATTTTTGGATCAA s panTro5.chr4 192985934 50 + 194502333 TCATTTTCTAAATATACTTTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870366 50 + 195804263 TCATTTTCTAAATATACTTTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902592 49 + 4876863 TCATTTTCTAAATATACTTTAT-TAA------AAACAT----------TTAAAATTTTTGGATCAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796372 50 + 115148730 TCATTTTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066854 50 + 190429646 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010471 50 + 189454096 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400885 50 - 25927173 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431213 50 + 4669795 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387281 50 + 135778131 TCATTCTCTAAATATACTATATCTAA------AAAAAT----------TTTAAATTTTTGGATCGA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11274 50 + 1527111 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTAAAATTTTTGGATCAA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953098 50 + 2368649 TCATTCTCTAAATATACTGTATCTAA------AAAAAT----------TTTAAATTTTTGGATCAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181472 49 - 14256875 TTGTTCTCTAAATGTACTCTACCTAG-------AAAAT----------TTAAAATGTTTGGATCAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076170 50 - 2196201 TCATTCTGTAAATGTACTCTATCTAG------AAAAAC----------TTAAAATGTTTGAATCAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465481 50 - 5030052 TTGCTCTCTAAATGTACTCTATCTAG------AAAAAT----------TTTAAATGTTTGGATCAA i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298804 40 - 11315646 TAATCTTCTGAATGCATCCTACCTAA------AAAGA--------------AAGT------ATCAA i otoGar3.GL873580 C 0 C 0 s mm10.chr8 86669221 43 - 129401213 TCATTCTCTGAACATATTATACAT-------------T----------TTAAAATTATTAGTACAA i mm10.chr8 C 0 N 0 s canFam3.chr16 17014188 48 - 59632846 TCAGTCTCTGAATGTACCCTACTAAA------AGAAA------------CAAAGCTTTTGAATCAA i canFam3.chr16 I 174 C 0 s dasNov3.JH570353 1523632 66 - 2520184 TCATCCGCTAAACATATCTCATTTCAGATCTCAAGAATAGACATGGCATGAAAGCTTTTATAGTTA i dasNov3.JH570353 C 0 C 0 a score=4321991.000000 s hg38.chr4_KI270789v1_alt 201054 506 + 205944 --CTAAAAACTCTCTCAATTATTTTAGAGTTAACTCTTC--C-AAATTCTAAAATGTATTCATAAA-TTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTCTGTATA---------------------------TAAA-TTTACCTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAATATG--------CCAAT-------TTCTTTCCTCTATGTAGAAGTTTGAAATACATT-CTATGCCCTGAGAGAACCCTTTGAAATTTGA---ACACAT---AGAGTATTGTTATGTGCTTTCAAAACTT----TGTGTTGTATAGGAC-------CCTCTTTTAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTGCATCGC----ACATGTACTGGGACA-CCCATGGACAAAATCATAAGACTC--TGTCTTCCTGACAGATTTCCCTCCTCTCCTGGGGAATTCTCTAATGATGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGG----TTTTTT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGCACGTGATGCTGTTACACTGCAGGGT-------AGCGTTTTT---------- s panTro5.chr4 192985984 511 + 194502333 --CTAAAAACTCTCTCAATTATTTTAGAGTTAACTCTTC--C-AAATTCTAAAATGTATTCATAAATTTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTCTGTATA---------------------------TAAA-TTTACCTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAATATG--------CCAAT-------TTCTTTCCTCTATGTAGAAGTTTGAAATACATT-CTATGCCCTGAGAGAACGCTTTGAAATTTGA---ACACAT---AGAGTATTGTTATGTGCTTTCAAAACTT----TGTGTTGTGTAGGAC-------CCTCTTTTAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTGCATCGC----ACATGTACTGGGACA-CCCATGGACAAAATCATAAGACTC--TGTCTTCCTGACAGATTTCCCTTCTCTCCTGGGGAATTCTCTAATGACGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGGTTTTTTTTTT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGCACGTGATGCTCTTACACTGCAGGGT-------AGCGTTTTT---------- i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870416 511 + 195804263 --CTAAAAACTCTCTCAATTATTTTAGAGTTAACTCTTC--C-AAATTCTAAAATGTATTCATAAATTTATAT--ACAACTATTTTAATGGTTACTGTGGGCCCA-AC-----TTCTGTATA---------------------------TAAA-TTTTCCTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAATATG--------CCAAT-------TTCTTTCCTCTATGTAGAAGTTTGAAATACATT-CTATGCCCTGAGAGAACGCTTTGAAATTTGA---ACACAT---AGAGTATTGTTATGTGCTTTCAAAACTT----TGTGTTGTGTAGGAC-------CCTCTTTTAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTGCATCGC----ACATGTACTGGGACA-CCCATGGACAAAATCATAAGACTC--TGTCTTCCTGACAGATTTCCCTTCTCTCCTGGGGAATTCTCTAATGACGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGGTTTTTTTTTT------------------------------------------------------------------------------------------------TTTCTC--------AGTTTCTTCTGTGTGATGCACGTGATGCTCTTACACTGCAGGGT-------AGCGTTTTT---------- i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3902641 506 + 4876863 --CTAAAAACTCTCTCAATTATTTTAGAGTTAACTCTTC--C-AAATTCTAAAATATATTCATAAATTTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTCTGTATA---------------------------TAAA-TTTACCTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAATATG--------CCAAT-------TTCTTTCCTCTATGTAGAAGTTTGAAATACATT-CTATGCCCTCAGAGAACCCTTTGAAATTTGA---ACATAT---AGAGTATTGTTATGTGCTTTCAAAACTT----TGTGTTGTATAGGAC-------CC-CTTTTAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTGCATCGC----ACATGTACTGGGACA-CCCATGGACAAAATCACAGGACTC--TGTCTTCCTGACAGATTTCCCTTCTCTCCTGGGGAATTCTCTAATGACGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGCATGG----TTTTTT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGCACGTGATGCTCTTACACTGCAGGGT-------AGCGTTTTT---------- i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796422 505 + 115148730 --CTAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCATAAATTTATAT--ACAACTATTTTAATGGTCCCTGTGGGCCCA-AC-----TTCTCTATA---------------------------TAAA-TTTA-CTTCTT--GTTTT-----------ATAGGTGCTAATGCTTAAAGATACTTAAATATG--------CCAAT-------TTCTTTCCTCTATGTAGAAGTTTGAAATACATTCCTATGGCCTGAGAGGACCCTTTGAAATTTGA---ACACAT---AGAGTATCGTTATGTGCTTTCAAAACTT----TGTGTTGTATAGGAC-------CCTCTTTCAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTGCATCGC----ACATGTCCTGGGACA-CCTATGGACAAAATCACGAGA--C--TGCCTTCCTGACAGATTTCACCTCTCTCCCGGGGAGTTCTCTAATGGCGTCACTT----------------------------------------------------------------------------GTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTTTTTT------------------------------------------------------------------------------------------------TTTTCC--------AGTTTCTTCTGTGTGATGCACGTGATGCTCTTACACTGCAGAGT-------AGCGTTTTT---------- i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189066904 498 + 190429646 --ATAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACGCTTTGAGATTTGA---ACACAT---AAAGTATTGTTACGTGCTTTCAAAACTT----TGCGTTGTG-----------------TTTTAGCTGAAGATTTTTCAAGCAGTAAG-CCTGTCCTATATCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATGAGACTC--CATCTTTCTGACAGATTTCCTTTGTTTCCTGGGGAAATCTCTGATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTTTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATATACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188010521 498 + 189454096 --ATAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACGCTTTGAGATTTGA---ACACAT---AAAGTATTGTTACGTGCTTTCAAAACTT----TGCGTTGTG-----------------TTTTAGCTGAAGATTTTTCAAGCAGTAAG-CCTGTCCTATATCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATGAGACTC--CGTCTTTCTGACAGATTTCCTTTGTTTCCTGGGGAAATCTCTGATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTTTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATATACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24400935 498 - 25927173 --ATAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACGCTTTGAGATTTGA---ACACAT---AAAGTATTGTTACGTGCTTTCAAAACTT----TGCGTTGTG-----------------TTTTAGCTGAAGATTTTTCAAGCAGTAAG-CCTGTCCTATATCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATAAGACTC--CGTCTTCCTGACAGATTTCCTTTGTTTCCTGGGGAAATCTCTGATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTTTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATATACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431263 498 + 4669795 --ATAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACTGCGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGCTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACCCTTTGAGATTTGA---ACACAT---AAAGTATTGTTACCTGCTTTCAAAACTT----TGTGTTGTG-----------------TTTTAGCTGAATATTTTTCAAACAGTAAG-CCTGTCCTATATCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATGAGACTC--CGTCTTCCTGACAGATTTCCTTTGTTTCCTGGGGAATTCTCTGATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTCTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGTACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387331 500 + 135778131 --ATAAAAACTCTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--GCAACTATTTTAATGGTCACTGTGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTCATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACCCTTTGAGATTTGA---ACACAT---AGAGTATTGTTATGTGCTTTCAAAACTT----TGCGTTGTG-----------------TTTTAGCTGAATATTTTTCAAGCAGTAAG-ACTGTCCTATATCAC----ACACGTACCGGGACA-CCCATGGACAAAATCGTGAGACTC--CGTCTTCCTGACAGATTTCCTTTCTTTCCTGGGGAAATCTCTAATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTGTGT--TTTTTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGTATGTGAGGCGCTCACACTGCAGGGC-------TGGGCTTTT---------- i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11324 498 + 1527111 --ATAAAAA--CTCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACTGCGGGCCCA-AC-----TTATCTATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGTATG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTCTGAAATCCATTCCTATGCCCTGAGAGGACCCTTTGAGATTTGA---ACACAT---AAAGTATTGTTACCTGCTTTCAAAACTG----TGTGGTGTG-----------------TTTTAGCTGAATATTTTTCAAGCAGTAAG-CCTGTCCTATGTCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATGAGACTC--CGTCTTCCTGACAGATTTCCTTTGTTTCCCGGGGAAATCTCTGATAGCGTCACTC----------------------------------------------------------------------------TTTTTT-TG----------------------------------------TGCCCTGTATGT--TTTCTTGT------------------------------------------------------------------------------------------------TTTTTC--------AGTTTCTTCTGTGTGATGTACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953148 502 + 2368649 --ATAAAAACTCCCTCAATTATTTTAAAGTTTACTCTTC--C-AAATTCTAAAATGTATTCAGAAAGTTATAT--ACAACTATTTTAATGGTCACCGTGGGCCCA-AC-----TTATCCATA---------------------------TAAA-TTTACTTTCTT--ATTTT-----------ACTGGTGCTAATGTTTAAAGATACTTAAGGACG--------CCTAT-------TTCTTTCCTTTATGTAGAAGTTTGAAATCCATTCCTATGCCCTGAGAGGACCCTTTGAAATTTGG---ACACAT---AGAGTATTGTTACGTGCTTTCAAAACTT----TGCGTTGTG-----------------TTTTAGCTGAATATTTTTCAAGCAGTAAATCCTGTCCTATATCAC----ACACGTACTGGGACA-CCCATGGACAAAATCATGAGACTC--TGTCTTCCTGACAGATTTCCTTTCTTTCCTGGGGAAATCTCTAATAGCGTCGCTC----------------------------------------------------------------------------TTTTTTGTG----------------------------------------TGCCCTGCATGT--TTTTTTGT------------------------------------------------------------------------------------------------TTTTTT--------AGTTTCTTCTGTGTGATGTACGTGATGCTCTTACACTGCAGGGT-------AGGGCTTTT---------- i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13181521 501 - 14256875 --ATAAAAACCCTCTCAATTATTTTAAATTTCACTCTTC--C-AAATTCTAAAATGTGTTCATAAATGTATGT--ACAGCTCATTTAATAATCACTGTAGTCCAA-A-------CATCAATA---------------------------TAAA-TTTAACTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAAAATG--------GCTGT-------TTCTTTCCTTTGTGTAGATGTTTGAAATACATTTCTATGCACTGAGAGGAGCCTCTGCAATTTGA---ACACATGTGGGAGTACTGTTACGTGCTTTC-AAACTT----TGTGTTGTATAGAAC-------CCTCTTCCAGCTGAATACTTTTCCAGCAGTAAG-CGTGTCTTGCATCAC----ACGTGCACTGGGACACCCCACGGATAAAATCATAAAACCC----TCTTCCTGACAGATTTCCCTTCTCTCCTGGGAAATCCTCTAATGGTGTTCCTC----------------------------------------------------------------------------TTTTT--TG----------------------------------------TGCCCTATATGG--------TT------------------------------------------------------------------------------------------------TTTGTA--------AGTTTCTTCTGTGTGATGCACGTGATGTTCTTACACTGTAGGGT-------AGGG-TTTA---------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076220 503 - 2196201 --ATAAAAACCCTCTCCATTATTTAAAATTTCACTCTTC--C-AAATTCTAAAATGTGTTCATAAATGTATGT--ACAGCTAATTTAATAATCACTGTGGTCCAA-AG-----TTATCAATA---------------------------TAAA-TTTAATTTCTT--ATTTT-----------GCAGGTGCTAATGTTTAAAGATACTTAAAAATG--------GCTGT-------TTCTTTCCTTCGTGTAGATGTTTGAAGTACACTTCTATGCACT--GAGGAACCTCTGCAATTTGA---ACACAT---GGAGTGTTGTTGTGTGCTTTCAAAACCT----TGTGTTGTGTAGGAC-------CCTCTTCCAGCTGAATATTTTTCCAGCAGTAAG-CGTGTGCTACATCACACATACATGCACTGggacaccccacggatacaatcatgagattt----tcttcctgacagatttcccttctctccagggaaaacctctaatggtgtcggtc----------------------------------------------------------------------------tTTTT--TG----------------------------------------CGGCCTATACGG--------TT------------------------------------------------------------------------------------------------TTTGTA--------AGTTTCTTCTGTGTGATGCACGTGATGTTCTTACACTGTAGGGT-------AGAG-TTTA---------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3465531 503 - 5030052 --ATAAAAACCCTCTCAATTATTTTAAATTTCACTCTTC--C-AAATTCTAAAATGTGTTCATAAATGTATGT--ACAGCGAATTTAATAATCACTGTGGTCCAA-AC-----TTATCAATA---------------------------TAAA-TTTAATTTCTT--ATTTT-----------ACAGGTGCTAATGTTTAAAGATACTTAAAAATG--------GCTGT-------TTCTTTCCTTTATGTAGATGTTTGAAATACATTTCTATGCACTGAGAGGAGCCTCTACAATTTGA---ACACAT---GGAGTATTGTTATGTGCTTTCAAAACTT----TCCGTTGTATAGGAC-------CCTCTTTCAGCTGAATATTTTTCCAGCAGTAAA-CCTGTCCTACATCAC----ATATGCACTGGGACACCCCACGGATAAAATCATGAGACTC--TGTCTTCCTGACAGATTTCCTTTCTCTCCTGAAAAAACCTCTAATGGTGTCACTC----------------------------------------------------------------------------TTTTT--TG----------------------------------------TGCCCTATACGG--------TT------------------------------------------------------------------------------------------------TTTGTA--------AGTTCCTTTTGTGTGATGCACGTGATGTTCTTACACCGTAGGGT-------AGAG-TTTA---------- i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11298844 474 - 11315646 --ATAAAGT--CTTTTAATTACTTTAAATTTGATGCTGC--CAAAATTCTAATATGTTTTCATAAATCTAAAT--AAAACCATTTTAAGGGTGTCTGTGGCCCAA-CCCtattttatttata---------------------------taaattttattttCTT--ATTTC--------------------------------------------------------T-------TACTAAGTTTTGTGTAAATGTTTTAAACCCATTTCCGTGGATTTCAACCACCCTGTGAAGTT---------------TGAGTAGTGTTTTGTGCTTTCAAAACTTGGCATTCATTGTCAAGGGTCATATGACCCTTTTTTGTGGCATATTTTTCAAACATTAAG-CCTGTCATGCATCCC----ACATGTGCCAGGACA-TCCATGGACAAAATCACAATGCTCTATGTCTTCCTGATGGCTTCCCCCAGTCCCCTGAGAGATCCTCTGATGGGGCCACTC----------------------------------------------------------------------------CTCTTT-TG----------------------------------------TGAACTATGTAG----------------------------------------------------------------------------------------------------------TTTTTC--------CATTTCTTCCGTGGGGTGCACATGATATTCTTACACTGCTGAAT-------TTTTTTTTT---------- i otoGar3.GL873580 C 0 I 572 s canFam3.chr16 17014236 552 - 59632846 --ATAAAAA--CTATT--TTGTCTTAAATTTCACTGTGC--C-AGTTTCTAAAGTGTATTCAGAAATTTACAT-GAAAATTATTTCAATGGCCACAGTGG-CTTA-AA-----TTCCCtttattttaagatattttttaaaaattaaattaaa-tatatttttttgaattttaattaaCATTCAAACATGTTAATATTTAAAGACACTTAAAAATGCCAATGCTCCTAT-------TTCTTTCCTCTGGGAAG--GTTTGAGACACATTTCCATGCATTTAAAGGACCCTTTAAATTTTGG---AAACAT---AGC-TATTATTTTGTACTTTCAAAACTT----GGTGTTGCATATGAC-------CCT-TTTTGGCTGACTATCTTCTCAGCAGTAAG-CCCACTACACTTCAC----ACATGTAATAGACAC-CCTGTGGATAAAATCATGATGCTC--TGTCTTTCTGACAGCCTTCTCTTCTCTCCTGAGGGAACCTTTAGTGG-GTGACTC----------------------------------------------------------------------------TTCTCT-TG----------------------------------------TGTCTCACATGT--TTGTTTTT------------------------------------------------------------------------------------------------TTCTTCTTTTCCATAATTTCTTTCATAATATATACAGAATATTCTTATTCTGTTGTTT------------TTTT---------- i canFam3.chr16 C 0 I 11 s dasNov3.JH570353 1523698 727 - 2520184 TTTTTCAGC--CTTCTAATTATTTTA---CTTTCTTTTCGAC-AATTTCTAAAATATCTTCACGAATTTACACAAACAATTATTTTAATGGCCACTATGGTCCAATAC-----TTC---------------------------------CAAA-TGTATTTTCTT--GCTTT-----------TCAGATGTTAATCTTTAAAGATACTGAAACATA--------CCAACGTCTGTATTTTTTCCTTTATAACAGAATTTGAAACACATTTCCA-ACTTTGAGACCACCC--------TTGACCCACCCAT---GGAATATTGCTCTGTGCGTTCTAACCTT----GGCATTGTATATGAT-------CGTCTGTTAGCCCAGAGTTGTCCAATCAGTGGG-ACTGCCGGGAGACAC----ACACGTGTGGGGAAT-CCACACGATCAACTCATT---CTG--CATTTCCCAGACAACTT---CTTCTCCCCAAGGAGCGTCT---ATGGAGTTACTCATCTCTTATTCCCAAAAATCCCCCCCACCCCCCCACCCCGGAGATGGCtccttcatctatattgattctttttgttttttct-tgttgtttgcacttgtggtttttgcttattgtctgattattttgttttgttttg--ttttttctttaggaggcaccatgaacccaggacctcccatgtgggaagtggatgctcaactgtttgagtcacatccaccccccCACCCCCCAATATATTTGTTATTTTCC--------AATTTCTTCTGAGTGATGGACATGATATTCTTACCCTGCTGGGTTTTTGTTGATGTTTTTGTTGTTCTTT i dasNov3.JH570353 C 0 C 0 a score=1172603.000000 s hg38.chr4_KI270789v1_alt 201560 128 + 205944 AAAAAATCTGATTTACAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACCTTGTG-TTTTTTCAAAAATTCCTAACAGACTTATTTAGGTCTAACTGACCTAAAATAAACCACACATGGTACAGT s panTro5.chr4 192986495 128 + 194502333 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACCTTGTG-TTTTTTCAAAAATTCCTAACAGACTTATTTAGGTCTAACTGACCTAAAATAAACCACACATGGTACAGT i panTro5.chr4 C 0 C 0 s panPan2.chr4 192870927 128 + 195804263 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACCTTGTG-TTTTTTCAAAAATTCCTAACAGACTTATTTAGGTCTAACTGACCTAAAATAAACCACACATGGTACAGT i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3903147 128 + 4876863 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACCTTGTG-TTTTTTCAAAAATTCCTAAcagacttatttaggtctaactgacctaaaataaaccacacatggtacagt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112796927 127 + 115148730 -AAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACCTTGTG-TTTTTTCAAAAATTCCTaacagacttatttaggcctaactgatctaaaataaaccacacatggtacagt i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189067402 128 + 190429646 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACTTTGTG-TTTTTTCAAAAATTCCTATCACACTTATTTCGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i rheMac8.chr5 C 0 C 0 s macFas5.chr5 188011019 128 + 189454096 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACTTTGTG-TTTTTTCAAAAATTCCTATCACACTTATTTTGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24401433 127 - 25927173 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACTTTGTG-TTTTTTC-AAAATTCCTATCACACTTATTTCGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i macNem1.NW_012013133v1 C 0 C 0 s cerAty1.NW_012001672v1 3431761 125 + 4669795 AAAAAATCTGATTTAGAGTTTGTC---CTATTATATATTTTGCTTATAAAAACTCTGTG-TTTTTTCAAAAATTCCTATCACACTTATTTCGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387831 128 + 135778131 AAAAAATCTGATTTAGAGTTTGTCCTACTATTATATATTTTGCTTATAAAAACTTTGTG-TTTTTTCAAAAATTCCTATCACACTTATTTAGGTCAAGCTGACCTACAATAAACCATACATGGTAAAGT i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11822 125 + 1527111 AAAAAATCTGATTTAGAGTTTGTC---CTATTATATATTTTGCTTATAAAAGCTTTGTG-TTTTTTCAAAAATTCCTATCACACTTATTTCGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953650 126 + 2368649 AAAAAATCTGATTTAGAGTTTGCCCTACTCTCGTATATTTTGCTTATAAAAAC--TGTG-TTTTTTCAAAAATTCCTGTCACACTTATTTAGGTCAAGCTGACCTACAATAAACCACACATGGTAAAGT i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13182022 129 - 14256875 AAAAATTCTGATTTAGAATTTGTCCTACTATTACATATTCTGCTTATAAAAACTATATGTTTTTTTAAAAAATTCTTAACAGACTTATTGAGGTCTAAGTGACCTAAAATAAACTACATATGTTAAAGT i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076723 128 - 2196201 AAAAATTCTGATTTAGAGTTTGTCCTACTATTACATATTTTGCCTATAAAAACTATATG-TTTTTGAAAAAATTCTTaacagacttattgaggtctaactgacctaaaataaaccacatatgttaaagt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3466034 128 - 5030052 AAAAATTCTGATTGAGAGTTTGTCCTACTATTACATATTTTGCTTATAAAAACTATATG-TTTTTAAAAAAATTCTTaacagacttattgaggtctaactgatctaaaataaaccacatatgttaaagt i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17014799 116 - 59632846 AAAAATTCTGATCTAGAATTTGGCCTACTGTAGTGTATTTTGCTTATAAGAC--------TATTTTCTACAAtttttaacaga-ttattgaggtttaattgac----aattaactgcacatattagagt i canFam3.chr16 I 11 C 0 s dasNov3.JH570353 1524425 127 - 2520184 GTAAAATCTCACTTAGGGTTCAGCTTACTATAATGTATTTTACTTTTAAGAGTCTCCT--TTTTTCCAACCAttttaaacagatgtattgaggtttaattgatgaacaacaaactacacatgcaatagt i dasNov3.JH570353 C 0 N 0 e otoGar3.GL873580 11299318 572 - 11315646 I a score=1372001.000000 s hg38.chr4_KI270789v1_alt 201688 189 + 205944 GTACAGTTTGATGGGCTTCGA-CATAAGCACATATA-atgggttgaattatgtccctcacgagat-atgttaaagtcctaaaccctg-tttctcatttgcgaatagggcctttatttggaaatagggtcattgcaggtataattagctaagatgaggttgtagtggagtggagtgggcccttaatccccttaa s panTro5.chr4 192986623 180 + 194502333 GTACAGTTTGATGGACTTCGA-CATAAGCACATATA-ACgggttgaattatgtccctcacgagat-atgttaaagtcctaaaccctg-tttctcatttgcgaatagggcctttatttggaaatggggtcattgcaggtgtaattagctaagatgaggttgtagtggagtggagtggg---------cccttaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192871055 180 + 195804263 GTACAGTTTGATGGACTTCGA-CATAAGCACATATA-ACgggttgaattatgtccctcacgagat-atgttaaagtcctaaaccctg-tttctcatttgcgaatagggcctttatttggaaatggggtcattgcaggtgtaattagctaagatgaggttgtagtggagtggagtggg---------cccttaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3903275 184 + 4876863 gtacagtttgatgggctttga-caTAAGCACATATA-Atggattgaattatgt-cctcatgagat-atgttaaagtcctaaaccctg-tttctcatttgcgaatacgacctttatttggaaatagggtcgttgcaggtgtaattagctaagatgaggttgcagtggagtggagtgggccctt----cccttaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112797054 190 + 115148730 gtgcagtttgatgggctttga-catatgcGCTTATA-atgggttgaattatgtccctcacgagat-atgttaaagtcctaaaccctgttttctcatttgcgagtagggcctttatttggaaacagggtcattgcagatgtgattagctaagatgaggttgtagtggagtggagtgggcccttaatccccttaa i nomLeu3.chr7b C 0 C 0 s rheMac8.chr5 189067530 181 + 190429646 GCACAGTTTGACGAGCTTCGA-TAAATGCACATATA-atgggttgaattacgtccctcacgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcattagccaagatgaggctgtagtggagtggagtgggtccttaaaccccttaa i rheMac8.chr5 C 0 N 0 s macFas5.chr5 188011147 181 + 189454096 GCACAGTTTGACGAGCTTCGA-TAAATGCACATATA-atgggttgaattacgtccctcacgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcattagccaagatgaggctgtagtggagtggagtgggtccttaaaccCCTTAA i macFas5.chr5 C 0 C 0 s macNem1.NW_012013133v1 24401560 181 - 25927173 GCACAGTTTGACGAGCTTCGA-TAAATGCACATATA-atgggttgaattacgtccctcatgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcattagccaagatgaggctgtagtggagtggagtgggtccttaaaccCCTTAA i macNem1.NW_012013133v1 C 0 N 0 s cerAty1.NW_012001672v1 3431886 181 + 4669795 GCACAGTTTGACGAGCTTCGA-TAAATGCACATATA-Atgggttgaattacgtccctcacgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcgttagccaagatgaggttgtagtggagtggagtgggtccttaatccccttaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134387959 182 + 135778131 GCACAGTTTGATGAGCTTCGA-TAAATGCACATATA-atgggttgaattacgtccctcacgagataatgt--------taaatcctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcattagccaagatgaggttgtagtggagtggagtgggtccttcatcctcttaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 11947 181 + 1527111 GCACAGTTTGACGAGCTTCGA-TAAATGCACATATA-Atgggttgaattacgtccctcacgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttatttggaattagggtcactgcagatgtcattagccaagatgaggttgtagtggagtggagtgggtccttagtccccttaa i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953776 181 + 2368649 CCACAGTTTGATGAGCTTCAA-TAAATGCACATATA-Atgggttgaattacgtccctcacgagat-atgt--------taaaccctg-tttctcatttgcgaatagggcctttgtttggaattggggtcactgcagatgtcattagccaagatgaggttgtagtggagtggagtgggtccttcatccccttaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13182151 163 - 14256875 GTAC---------AGCTTTGA-CGTGTGCACATATA-Gtgggttgaattatgtccctcatgagac-atgttcaagtcctaactcctt-gttcttatttgggaataggccctttatttggaaatagaat--------atataattagctaagatgaagtagtagtgaagcggagtggggccttaa--------- i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1076851 180 - 2196201 gtgcagtttgatgagcttcga-catgtgcacataTA-Gtgggttgaattatgtccctcacgagat-atgttcaagtcctaactcctt-gttctcatttgggagtaggccctttatttggaaataggataattgcagatataattagctaagatgaggctgtagtgcagcggagtggggccttaa--------- i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3466162 180 - 5030052 gtacagtttgatgagctttga-catgtgcacataTA-gtgggttgaattatgtccctcatgagat-atgttgaagtccttactcctt-gttgtcatttgggaataggccctttatttggaaatagcataactacagatataattagctaagatgaggttgtagtggagcagagtggggccttaa--------- i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17014915 175 - 59632846 atacaa-ttgatacgttttgagtatatacataaacATATTGTTCAAATT------CTAAAAAGGt-atgttgaaatcagaacttttg-tttc----ttcagaatgtgagc-ttatttggaaataagttcatttctgatgtaattagtttatagcaggtcatattggaatggtgttggcccttattccaa---- i canFam3.chr16 C 0 C 0 e otoGar3.GL873580 11299318 572 - 11315646 I a score=18980.000000 s hg38.chr4_KI270789v1_alt 201877 5 + 205944 tccta s panTro5.chr4 192986803 5 + 194502333 tccta i panTro5.chr4 C 0 C 0 s panPan2.chr4 192871235 5 + 195804263 tccta i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3903459 5 + 4876863 tccta i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112797244 5 + 115148730 tccta i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 188011328 5 + 189454096 CTCCA i macFas5.chr5 C 0 N 0 s cerAty1.NW_012001672v1 3432067 5 + 4669795 cccta i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134388141 5 + 135778131 cccta i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 12128 5 + 1527111 accta i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953957 5 + 2368649 cccta i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13182314 5 - 14256875 tcctg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1077031 5 - 2196201 tccca i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3466342 5 - 5030052 tccta i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17015090 1 - 59632846 ---t- i canFam3.chr16 C 0 C 0 e otoGar3.GL873580 11299318 572 - 11315646 I a score=3061703.000000 s hg38.chr4_KI270789v1_alt 201882 594 + 205944 aatgaggggtgtcatcataagaaagacactggcaaacagatacagacacagagggaa-----gaacgccacatgacaa-ggaggcaggggg--tggagtgatgctgccacacgtcaagaagaacctgcggccaccagag-ttagaagaggcaagaaaggattctctcgtggaggcctcggact-ggcatcgccttgccaacaacgctgatggtgggcttccagcctccagaattgtaaggcaataaattcatgttgttttaagccaaccagtttgtggtGA--------AATAGCCCCAGGAAACGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcaacaagtttcctgaaggccctcccatc-acacagtcccaagtcccacctccttcctcaggaaaccactgaact--ctttt--gtcact-----atagaccgtattttgtagaatta-atataaattttacataaatttatataaatccccaaattatagaaaata----tatttactgtatacatgcggtatatactggctgctttcagcataattatttggaggtttatt----------------------------catcat------tcttttgaacattcatttttttg s panTro5.chr4 192986808 593 + 194502333 aatgaggggtgtcatcataagaaagacactggcaaacagatacagacacagagggaa-----gaaggccacatgacaa-ggaggcaagggg--tggagtgatgctgccacacgtcaagaagcacctgtggccaccagag-ttagaagaggcaaggaaggattctctcacggaggcctcggact-ggcatcgccttgccaacaacactgatggtgggcttccagcctccagaagtgtaaggcaataaatttatgttgttttaagccaaccagtttgtggtga--------aatagccccaggaaacGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcaacaagtttcctgaaggccttcccatc-acaccatcccaagtcccacctccttcctcaggaaaccactgaact--ctttt--gtcact-----atagaccgtattttgtagaatta-atataaattttacataaatttatataaatccccaaattatagaaaatg----tatttactgtatacatgcggtatatactggctgctttcagcataattatttgg-cgtttatt----------------------------catcat------tcttttgaacattcatttttttg i panTro5.chr4 C 0 C 0 s panPan2.chr4 192871240 593 + 195804263 aatgaggggtgtcatcataagaaagacactggcaaacagatacagacacagagggaa-----gaaggccacatgacaa-ggaggcaggggg--tggagtgatgctgccacacgtcaagaagcacctgtggccaccagag-ttagaagaggcaaggaaggattctctcgtggaggcctcggact-ggcatcgccttgccaacaacactgatggtgggcttccagcctccagaattgtaaggcaataaatttatgttgttttaagccaaccagtttgtggtga--------aatagccccaggaaacGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcaacaagtttcctgaaggccttcccatc-acaccatcccaagtcccacctccttcctcaggaaaccactgaact--ctttt--gtcact-----atagaccgtattttgtagaatta-atataaattttacataaatttatataaatccccaaattatagaaaatg----tatttactgtatacatgcggtatatactggctgctttcagcataattatttgg-cgtttatt----------------------------catcat------tcttttgaacattcatttttttg i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3903464 592 + 4876863 aatgaggggtgtcatcataagaaagacattggcaaacagatacagacacagagggaa-----gaaggccacatgacaa-ggaggcaggggg--tggagtgatgctgccacac-tcaagaagcacctgtggccaccagag-ttagaagaggcaaggaaggattctctcgtggaggcctcggact-ggcatcgccttgccaacaacactgatggtgggcttccagcctccagaattgtaaggcaataaatgtatgttgttttaagccaaccagtttgtggtga--------aatagccccaggaaacGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcaacaagtttcctgaaggccctcccatc-acactgtcccaagtcccacctccttcctcaggaaaccactgaact--ctttt--gtcact-----atagaccgtattttgtagaatta-atataaa-tttacataaatttatataaatccccaaattatagaaaata----tatttactgtatacatgcggtatatactggctgctttcagcataattatttggaggtttatt----------------------------catcat------tcttttgaacattcatttttttg i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112797249 577 + 115148730 aatgaggggtgtcatcataagaaagacactcacaaacagatacagacacagaaggaa-----gacggccacatgacaa-ggaggcaggggg--tggagtgatgctgccacacgtcaagaagcacctgtggccaccagag-ttagaagaggcaaggaaggattgtctcgtggaggcctcggact-ggcatcaccttgctaacaacactgatggtgggcttccagcctccagaattgtaaggcaataaatttatgttgttttaagccaaccagtttgtggtga--------aatagccccaggaaacggaTCCAATCtacaatcatgaaaccatctgagaataaaaatagcaaacataaccctcacctcaacaagtttcctgaagttcctcccgtc-acaccttcccaagtcccacatccatcctcaggaaaccactgaact--ctttt--gtcact-----atagacagtattttgtagaatta-gtataaattttacataaatttatataaatcccaaaattatagaaaata----tatttactgtatacatgtggcatatattggctgctttcagcataattatttggaggtttatt----------------------------catt-----------------------tttttttg i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3432072 601 + 4669795 aatgaggggtgtcatcataagaaggacattcgcaaacagatacagacactgaggaaa-----gaaggccacgggacaa-ggaggcaggagg--tggagtgatgctgccacacgccatgaagcacttgtggccaccagag-tcagaagaggcaaggatggg-tctctcacggaggcctcggact-ggcatcgccttgctcgcgacactgatggggggcttccagcctccaggactgtaagacaatacatttgtgttgttttaagccaaccagtttgcggtCA--------AATAGCTCCAGGAAACGGATCCAgtctacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcagcaagtttcctgaaggccctcccatc-acaccttcccaagtcccacctccatcctcaggaaaccactgaact--cttttttgtcact-----atagaccgtattttgtagaatta-atataaattttacataaatttatataaatccccaaattatagaaaata----tatttactgtgtacatgtggtatatactggttgctttcagcataattatttggaggtttatt----------------------------catcatgttcattcttttgagcattcattattttg i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134388146 598 + 135778131 aatgaggggtgtcatcacaagaaggacattcgcaaacagatacagacactgagggaa-----gaaggccacgcgacaa-ggaggcgtgatgcttggagtgatggtgccacacaccacaa------tgtggccaccagag-tcagaagaggcaaggacgggttctctcacggaggcctcggact-ggcattgccttgctcacgacactgatggtgggcttccagcctcccggactgtaagacaatacatttatgttgttttaagccaaccagtttgcggtCA--------AATAGCTCCAGGAAACGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcaacaagtttcctgaaggccctcccatc-acaccttcccaagtcccacctccatcctcaggaaaccactgaagt--ctttttcgtcact-----atagaccgtattttgtagaatta-atataaattttacataaatttatataaatcccaaaattatagaaaata----tatttcctgtgtacatgtggtatatactggctgctttcagtataactatttggaggtttatt----------------------------catcatgttcattcttttgagcattcatttttttg i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 12133 602 + 1527111 aatgaggggtgtcatcataagaaggacattcgcaaacagatacagacactgaggaaa-----gaaggccacgggacaa-ggaggcaggagg--tggagtgatgctgccacacgccacgaagcacctgtggccaccagag-tcagaagaggcaaggacgggttctctcacggaggcctccgact-ggcatcgccttgctcacgacactgatggggggcttccagcctccaggactgtaagacaatacatttatgttgttttaagccaaccagtttgcggtCA--------AATAGCTCCAGGAAACGGATCCAATCtacaatcatgaaaccatctgaaaataaaaatagcaaacatatccctcacctcagcaagtttcctgaaggccctcccatc-acaccttcccaagtaccacctccatcctcaggaaaccactgaact--cttttttgtcact-----atggaccgtattttgtagaatta-atataaattttacataaatttatataaatccccaaattatagaaaata----tatttactgtgtacatgtggtatatactggttgctttcagcataattatttggaggtttatt----------------------------catcatgttcattcttttgagcattcattattttg i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 953962 588 + 2368649 aatgaggggtgtcatcataagaaggacattcgc------------acactgagggaa-----gaaggcca-gcgacaa-ggaggcaggggg--tgaagtgatgctgccacacgccacgaagcacctgtggccaccagag-ccagaagaggcaaggacgggtcctctcacggaggcctcggact-ggcatcgccttgctcacgacgcggacggt-ggcctccagcctccaggactgtcaggcaatacatttatgttgttttaagccaaccagtttgcggtCA--------AATAGCTCTAGGAAATGGATCCAATCtacaatcatgagaccatctgaaaataaaaatagcaaacatatccttcacctcaacaagtttcctgaaggccctcccatc-acaccttcccaagtcccacctccatcctcaggaaaccactgaact--cttttttgtcact-----ggagaccatattttgtagaatta-atataaattttacataaatttatataaatcccaaaattatggaaagta----tatttattgtgtacatgtggcatatactagctgctttcagcataattatttggaggtttatt----------------------------catcatgttcactcttttgaacattcatttttttg i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13182319 580 - 14256875 tatgagtggtggtgtcaaaaga---acattcgcaaacaggtacagacatagagagag-----gaaggccacgagacag-cgaggcggggag--tggagt-gtgctgccacgtgccCGGAGGTACCTGCGGCCCCCAGAG-TTAGAGGAG------------------------GCCTCAGCGT-GGCATCGCCTTGTTCAcaacactgacgttggacttctagcctctagaattgtaaggcaataaatttatcttgttaaaaggcaagcagtttgttgtaA--------AATAGCCCCAGGAAACGGATTCAATCtacagtcatgaaaccatctgaaaataaaaatagcaaacatagccctcacctcaacaagtttcctgaatgcccttgcagc-acacctccccaggtcccgcctccatcctcaggaaaccactgaacttcttttttggtcact-----atagaccatattttgcagaacta-atataaattttacatacatttatataaatcctaaaattatataaaatacatgtatttactgtgtacatgtggtatatactggcttctttcagcataattattttgaggtttatt----------------------------catcctgttcattcttttgaacattcattttattg i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1077036 569 - 2196201 catgagtggtggtgtcataaga---acgttcgcaaacaggtggagacacagagggag-----gaaggccacgagtcaa-ggaggcgggg-g--tggagcggtgctgccccatgccaggaggcaccTGCGCCCCCCAGAG-TTAGCGgag------------------------gcctcagcgt-ggcatcgccttgctcacaacactgacgttggacttctagcccctagaattgtaaggcaataaatttatgttgttttaagccaagcagtttgttgtaa--------aatagccccaggaaacAGATTCAATCTGcagtcatgaaaccatctgaaaataaaaacagcaaacacagccctcacctcaacaagtttcctgaatgccctcgaggc-acacctgcccaggtcccacctccgtcctcaggaaaccactgacct--ttttttagtcact-----acagaccgtattttgtagaagta-atgtaaattttacataaatttatataaatcctaaaattatataaaatatatatacttactgtatacatgtggtatatactgggctctttcagcataattatttcgaggtttatt----------------------------cgtc---------cttttgaacattcattttattg i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3466347 603 - 5030052 tatgagtggtggtgtcataaga---acattcgcaaacagatacagacacagagggat-----gaaggccacgagacaa-ggaggcggggag--tggagtgatgctgccatgtgccaggaactacctgcggcccccagag-ttagaggaggcaagcaaggattctctcctgga-gcctcagagt-ggcatcgccttgctcacaacactgatgttggacttctagcctctataattttaaggcaataaatttatgttgttttaagccaagcagtttgtcgtaa--------aatagccccaggaaaTGGATTCAATCtactgtcatgaaaccatctgaaaataaaaatagcaaacatagccctcacctcaacaagtgtcctgaatgcccttgcagc-acacctccccaggtcccacctctatcctcaggaaaccactgaactt-tgtttttgtcact-----gtagaccatattttgtagaacta-atataaatTTtacataaatttatataaatcctaaaattatataaaatatatatatttactgtatacatgtggtatatactggcttctttcggcataattatttcgaggtttatt----------------------------catcgtgttcattgttttgaacattcactttattg i aotNan1.NW_018492112v1 C 0 C 0 s canFam3.chr16 17015091 611 - 59632846 -atgactggtgttcttttaaga---------------------------agagggaaatttggatggccatgtgaagatggaggcagagat--tccagggatgttgccaaaagccaagaaacacccaggaccaccaaagactggaagaagcaaggaaggatactcccctagagacttcagaggaagcatgaccctg--gaacatgctaattttggacttcaagtctccagaactg--agataataaaattctgttgcttt-----aaccagtttgtggtagtttgttacagcagccctaggaaactaatacaATTtgcaatcaggaaaccatcttacaataaaaatagcaaaca-agccatcacctcaaaaagttatctaatcctcttcccattgacatctccctaacactcatc-ccatccccgtgaaaccattgaaca--tcttttggtcaccataggatagattgccttttctagaattctacatGTATATTACGCAAATTTATTAAAATTCTAGAACTGTATAAAA-A----TA-TTGTTATAGATATATGGTATGCCCTGGATTCTTTCAGCATAATTATTCTGAGATTCATTGTttagcataattattctgagattcatccatattgttcattcatgtgcacattcattcattg- i canFam3.chr16 C 0 C 0 e otoGar3.GL873580 11299318 572 - 11315646 I a score=1363798.000000 s hg38.chr4_KI270789v1_alt 202476 235 + 205944 ctcctt-tgtttagctaagtagtactcc-----cttgatatatcacaatttgtttatccattcacctgtttatggacattttagttgtttccaa-cttttggctatcacgaatgcatctgctg--tatgtgcacatatacatgtacaactatttgaacagagatacacttttgtttctcttgg-----tagacacctaattgtggaacagctgagtcctgtaacaggcatatgtttaacttttaaag------aa s panTro5.chr4 192987401 235 + 194502333 ctcctt-tgtttagctaagtagtactcc-----cttgatatatcacaatttgtttatccattcacctgtttatggacattttaattgtttccaa-cttttggctgtcgcgaatgcatctgctg--tatgtgcacatatacatgtacaactatttgaacagagatacacttttgtttctcttgg-----tagacacctaattgtggaacagccgagtcctgtaacaggcatatgtttaacttttaaag------aa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192871833 235 + 195804263 ctcctt-tgtttagctaagtagtactcc-----cttgatatatcacaatttgtttatccattcacctgtttatggacattttaattgtttccaa-cttttggctgtcgcgaatgcatctgctg--tatgtgcacatatacatgtacaactatttgaacagagatacacttttgtttctcttgg-----tagacacctaattgtggaacagccgagtcctgtaacaggcatatgtttaacttttaaag------aa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3904056 235 + 4876863 ctcctt-tgtttagctaagtagtactcc-----cttgatatatcacaatttgtttatccattcacctgtttatggacattttaattgtttccaa-cttttggctatcgcgaatgcatctgctg--tatgtgcacatatacatgtacaactatttgaacagagatacacttttgtttctcttgg-----tagacacctaattatggaacagccgagtcctgtaacaggcatatgtttaacttttaaag------aa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112797826 240 + 115148730 ctcctt-tgtttagctaagtagtgctccattgtattgatatatcacaatttgtttatccattcacctgtttatggacactttaattgtttccaa-cttttggctgtcacgaatgcatctgctg--tatgtgcacatatacatgtacaactatttgaacagagatacacttttgtttctcttgg-----tagacacctaattgtggaacagccgagtcctgtaacaggcatatgtttaacttttaaag------aa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3432673 240 + 4669795 ctcctt-tttttagctaagtagtactcccttgcattgacatatcacaatttgttgatccattctcctgtttatggacattttaattgttttcag-tttttggctatcacaaatgcatctgctg--tacgtgcatatatacaggtaagaatatttgaacagagatacactcttgtttctcttgg-----tagacacttgattgtggaacagccgagtcatttagcaggcatatgtttagcttttaaag------aa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134388744 240 + 135778131 ctccttctttttagctaagtagtactcccttgcattgatatatcacaacatgttgatccattcacctgtttatggacattttaattgtttccag-tttttggctatcacaaatgcatctgctg--tacgtgcatatatacaggtatgaatatttgaacagagatacactcttgtttctcttgg-----tagacacc-aattgtggaacagccgagtcatttagcaggcaaatgtttaacttttgaag------aa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 12735 240 + 1527111 ctcctt-tttttagctaagtagtactcccttgcattgatatgtcacaatttgttgatccattctcctgtttatggacattttaattgttttcag-tttttggctatcacaaatgcatctgctg--tacgtgcatatatacaggtgagaatatttgaacagagatacactcttgtttctcttgg-----tagacacctgattgtggaacagccgagtcatttagcaggtatatgtttagcttttaaag------aa i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 954550 242 + 2368649 ttcctt-tgtttagctaagtagtactcccttgtattgatgtatcacaatttgttgatccattcacctgtttatggacattttaattgtttccag-ttgttggctatcacaaatgcatctgctgtatacgtgcacatatacaggtattaatatttgaacagagatacactcttgttcctcttgg-----tagacacctaattgtggaacagccgagtcgtttagcaggcatatgtttaacttttaaag------aa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13182899 230 - 14256875 tgtgtt-tgtttagctg---agtactcccttgtattgatacatcaccatttgtttttccattcacctgtttat-gacattttaattgcttccaa-ttttgggttatcacaaatacacgtgctg--tacatgcacatgcaca------aacatttgaacagagatacacttttgtttctcttgg-----cagacacctagttgtgagacagctgagtcatatagcaggcatatgtttaacttttaaag------aa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1077605 239 - 2196201 cacgtt-tgtttagctgattagtactcccttgtgttgatatatcaccatgtgtttatccactcacctgtttat-gacattttcattgcgtccaa-tttttggctatcacaaatacacccgctg--tacatgcacatgtacatgtaccaatatttgaacagagacacacttttgtttctcttgg-----tagacacctagctgtgagacagctgagtcatgtagcaggcgtatgtttaacttttaaag------aa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3466950 239 - 5030052 cgtgtt-tgtttagctgagtagtactcccttgtattgatatatcacaatttgtttatccattcgcctgtttat-gacattttaattgcttccaa-tttttggctatcacaaatacacctgctg--tacatgcacatatacatgtacaaatatttgaacagagatacacttttgtttctcttgg-----tagacacctagttgtgagacagctgagtcatatagcaggcatatgtttaacttttaaag------aa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11299890 241 - 11315646 Ctcctt-tgcatttttgaatggtattcacttgcacgggtatatcacaatttctata-cctttcacctactgatgggcatttaagttgtttccca--tttggggtagtaaaaatatatctacta--aacatgcacatgtgcatatgc-aacacttgtatggcgatatccttccgtttctctcgg-----tgaatacctaactatggaacagct--gtcacatggtgggcataggttcaattaagaaaaagcctcaa i otoGar3.GL873580 I 572 C 0 s canFam3.chr16 17015702 243 - 59632846 ctcctt-tggtt-tccaaatagtattttgtgacacgaatttaccacaattagttcattcatccacctgttgatatacatttatattgttcccaaaaccttggagatcacaaatata-cagtta--tatatgt-catatgcatatacaaatattaatatggcgttacactttcatttctcttgggcagatagatccctaattgtggaagaactaggtcacattgtaagtatgtgtttaaattgcaaag------ga i canFam3.chr16 C 0 I 1059 a score=3622511.000000 s hg38.chr4_KI270789v1_alt 202711 670 + 205944 actgccaaac-cactttctaaagtaaacatacta-tgtacaatctcactagcagaatatagga------gttccagttcctccacatcttcatcaaca------------------------------------------------------------------------------gttcgtatgattacgctttgaaattttttcctttctaataggtatgtagtagtgtctcattgtggttttttatttacatttccctaatgactaataatactaaatgtc-tttcataggcttatttgtcatggcatgcct---ctggcataccatctgttcagatcttttgtctattgtctaa---tttttat---gggtttgatcttatca-----atttttg-------aaga----ttattctggatacaatgaatttgttagatatatgattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacgatattcttgaagagcaggtgttctt-atttttacgaaatttcttttatcactattttcttctatggattgtgtttttctatgaagcaacc-tttctaacccaaagtaataaagtttctgttatacagcttattcta-gaagtttgatagttttaggctttacc-ttggttctatagtcctttctgaattaactttcacatgttatgttaggtataaag---tctttttggtttgtttgcttttgcttttgtatattggtatccagttgttctagtactagtta---aaaatactatt s panTro5.chr4 192987636 669 + 194502333 actgccaaac-cactttctaaagtaaacatacta-tgtacaatctcagtagcagaatatagga------gttccagttcctccacatcttcatcaaca------------------------------------------------------------------------------gttagtatgattaggcttttaaattttttcctttctaataggtatgtagtggtatctcattgtggttttttatttacatttccctaatgactaataatactaaatgtc-tttcataggcttatttgtcgtggcatgcct---ctggcataccatctgttcagatcttttgtctattgtctaa---tttttat---gtgtttgatcttatca-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacgatattcttgaagagcaggtgttctt-atttttacgaaatttcttttatcactattttc-tctatggattgtgtttttctatgaagcaacc-tttcgaacccaaagtaataaagtttctgttatacatcttattcta-gaagtttgatagttttaggctttacc-ttgggtctatagtcctttctgaattaactttcacatgttatgtaaggtataaag---tctttttggtttgtttgcttttgcttttgtatattggtatccagttgttctagtactagtta---aaaatactatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192872068 669 + 195804263 actgccaaac-cactttctaaagtaaacatacta-tgtacaatctcagtagcagaatatagga------gttccagttcctccacatcttcatcaaca------------------------------------------------------------------------------gttagtatgattaggcttttaaattttttcctttctaataggtatgtagtggtatctcattgtggttttttatttacatttccctaatgactaataatactaaatgtc-tttcataggcttatttgtcgtggcatgcct---ctggcataccatctgttcagatcttttgtctattgtctaa---tttttac---gtgtttgatcttatca-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacgatattcttgaagagcaggtgttctt-atttttacgaaatttcttttatcactattttc-tctatggattgtgtttttctatgaagcaacc-tttcgaacccaaagtaataaagtttctgttatacatcttattcta-gaagtttgatagttttaggctttacc-ttgggtctatagtcctttctgaattaactttcacatgttatgtaaggtataaag---tctttttggtttgtttgcttttgcttttgtatattggtatccagttgttctagtactagtta---aaaatactatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3904291 670 + 4876863 actgccaaat-cactttctaaagtaaacatacta-tgtacaatctcagtagcagaatatagga------gttccagttcctccacatcttcatcaaca------------------------------------------------------------------------------gttagtatgattaggctttgaaattttttcctttctaataggtatgtagtggtatctcattgtggttttttatttacatttccctaatgactaataatactaaatgtc-tttcataggcttatttgtcgtggcatgcct---ctggcataccatctgttcagaaattttgtctattgtctaa---tttttat---gtgtttgatcttatca-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacgatattcttgaagagcaggtgttctt-atttttacgaaatttcttttatcactattttcttctatggattgtgtttttctatgaagcaacc-tttctaacccaaagtaataaagtttctgttatacgtcttattcta-gaagtttgatagttttaggctttacc-ttgggtctatagtcctttctgaattaactttcacatgttatgtaaggtataaag---tctttttggtttgtttgcttttgcttttgtatattggtatccagttgttctagtactagtta---aaaatactatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112798066 748 + 115148730 actgccaaac-cactttctaaagtaaacatacta-tgtacagtctcactagcagaatatagga------gttccagttcgtccacatcttcatcaacagttagtgtgatcaggcttttatgtacagtctcactagcagaatataggggttccagttcctccatatcttcatcaacggttagtatgattaggcttttaaattttttcctttctgataggtatgtagtggtatctcactgtggttttttatttacatttccctaatgactaataatactaaatgtc-tttcataggcctatttgtcatggcatgcct---ctggcataccatctgttcagatcttttgtttattgtctaa---tttttat---gtgtttgatcttatca-----atttttg-------gaga----ttattctggatacaatgaatttattagatatatgattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacaatattcttgaagagcagttgttctt-atttttatgaaatttgttttatcactattttcttctatggattgtgcttttctatgaagcaacc-tttctgacccaaagtaataaagtttctgttacacatcttattcta-gaagtttgatacttttaggctttacc-ttgggtctatagtcctttttgaattaactttcacatgttatgtaagttataaag---tctttttggtttgtttgcttttgcttttgtatattggtatccagttgttctagtaccagtta---aaaatactatt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3432913 671 + 4669795 accaccaaac-tgctttctaaagtcaacatacta-tctacagtctcactagcagaatatagga------gttccagttcctccccatcttcatcaacc------------------------------------------------------------------------------atgactatgattaggcttttaaatattttcctttctaataggtatgtcgtggtatctcattgtgg-ttttgattcacatttccctaatgactaataatactaaatgtc-tttcataggcctatatgtcatggcatgcct---ctggcatagcatctgttcagatcttttgtctattgtctaa---tttttgt---gtgttttatcttatta-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattcc-a----------tttttcacggtctgtggtttatcttttctttc----tcttaacaatattcttgaagagcaggtgttctt-atttttatgaaatttcttttatcactattttcttctatggattgtgtttttctattaagtaacc-tttctaacccaaagtaataaagtttctgttatacattttcttcta-gaagtttgatagttttagactttacc-ttgggtctatagtcgtttttgaattaactttcacatattatgtaaggtataaagtcttctttttggtttgtttgcttttgcttttgtatattggtatccaattgttctagtaccagtta---aaaatattatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134388984 672 + 135778131 accgccaaac-tgctttctaaaatcaacatacta-tctacagtctcactagcagaatatagga------gttccagtttctccacaccttcatcaacc------------------------------------------------------------------------------attactatgattaggcttttaaatattttcctttctaataggtatgtcgtggtatctcattgtgg-ttttgattcacatttccctaatgactagtaacactaaatgtc-tttcataggcctatatgtcatggcatgcct---ctggtgtagcatctgttcagctcttttgtctatcgtctaa---tttttgt---gtgttttatcttatta-----atttttg-------aaga----ttattctggatacaatgaatttattagatatataattccta----------tttttcatggtctgtggtttatcttttctttc----tcttaacaatattcttgaggagcaggtgttctt-atttttatgaaatttcttttatcactattttcttctgtggattgtgtttttctattaagtaacc-tttctaacccaaagtaataaagtttctgttatacattttcttcta-gaagtttgatagttttagactttacc-ttgggtctatagtcctttttgaattaactttcacatgttgtgtaaggtataaagtcttctttttggtttgtttgcttttgcttttgtatattggtatccaattgttctagtaccagtta---aaaatattatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 12975 671 + 1527111 accgccaaac-tgctttctaaagtcaacatacta-tctacagtctcactagcagaatatagga------gttccagttcctccccatcttcatcaacc------------------------------------------------------------------------------atgactatgattaggcttttaaatattttcctttctaataggtatgtcgtggtatctcattgtgg-ttttgattcacatttccctaatgactaataatactaaatgtc-tttcttaggcctatatgtcatggcatgcct---ctggcatagcatctgttcagatcttttgtctattgtctaa---tttttgt---gtgttttatcttatta-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattcc-a----------tttttcacggtctgtggtttatcttttctttc----tcttaacaatattcttgaagagcaggtgttctt-atttttatgaaatttcttttatcactattttcttctatggattgtgtttttctattaagtaacc-tttctaacccaaagtaataaagtttctgttacacattttcttcta-gaagtttgatagttttagactttacc-ttgggtctatagtcctttttgaattaactttcacatattatgtaaggtataaagtcttctttttggtttgtttgcttttgcttttgtatattggtatccaattgttctagtaccagctg---aaaatattatt i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 954792 672 + 2368649 accgccaaac-tgctttctaaaatcaacatacta-tctacaatctcactagcagaatatagga------gttccagttcctccacatcttcatcagcc------------------------------------------------------------------------------attcctatgattaggcttttaaatattttcctttctaatgggtgtgttgtggtatctcactgtgg-ttttgattcacatttccctaatgagtaataatactaaacgtc-tttcataggcctgtgtgtcatggcatgcct---ctggcgtagcgtctgttcagatcttttgtcgattgtctaa---tttttgt---gtgttttatcttatta-----atttttg-------aaga----ttattctggatacaatgaatttattagatatatgattccta----------tttttcacggtctgtggtttatcttttctttc----tcttaacaatattcttgaagagcaggtgttctt-atttttatgaaatttcttttatcactattttcttctacggattgtgtttttcttttaagtaacc-tttctaacccaaagtaataaagtttctgttatacattttcttcta-gaagtttgatagttttagactttacc-ttgggtctatagtcctttttgaattaactttcacatgttatgtaaggtataaagtcttctttttggtttgtttgcttttgcttttctacattggtatccaattgttctagtaccagtta---aaaatactttt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13183129 669 - 14256875 actgtcaaac-cattttctaaagtgaacataacgttttacaatttcactagcagtctatagga------gtgccagttcctctacatcttcatcaaca------------------------------------------------------------------------------gttggcctgatcaggcttttaaat-ttttcctttctaataggtatgtagtatcatctcattgtag-ttttgatttacatttccctaatgactaataatagtaaatgtc-tttcataggcctatttgtcatgacat-cct---ttggcatagcatctgttcaaatcttttgtctattttctaattttttttac-----gtttgatcttactg-----atttttg-------aagattctttatgttggatacaatgattttattagacatctgacca--------------ttttcatggtctgtgggttatcttttctttc----tctt---aagattctcaaaaagtgggtgttcttgatttttataaaatttctcttatcattattttcttctatggattgtgtttttctattaagtaaccttttctaacccaaagtaat--agtttctgttacatattttcttcta-gaaggttcatggttttaggctctcct-ttgggtctgtagtcctttgtgaattaactttcacctggtatgtaagctctaaagtcttctttttggtttctttgcttttgcctttgaatattggtatccaattgttgtagtaccagttt---aaaatactatt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1077844 671 - 2196201 actgccaaac-tattttctaaagtgaacataatgttttacaatttcactagcactctgtagga------gttccagttcctctacatcttcatcaaca------------------------------------------------------------------------------gctgctatgaccaggcttttaaat-ttttcctttctaataggtatgcagtattatctcattgtgg-ttttgatttacgtttccctaatgaccaataatattaaatgtc-ttttataggcctatttgttgtgacatgtct---ttggcatagcatctattcaaatcttttgtctattttctaattatttttac---atgtttgatcttattg-----atgtttg-------aagattctttatgctggatacaatgaatttattagacatctgacca--------------ttttcatggtctgtgggttatcttttctttc----tcttaacaagattcttgaaaaacaggtgttcttcatttttatgaaatttctcttttcattgttttcttctgtggattgtgtttttc---taagtaaccttttctaacccaaagtaat--agtttctgttacatattttcttcta-gagggttcatagttttaggctctccc-ttgggtctgtagtcctttgtgaattaactttca-ctggtatgtaagctctaaagtcttctttttggtttgtttgcttttgcctttgaatattggtatccaattgttctagtaccagttt---aaaatactatt i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3467189 678 - 5030052 actgccaaac-tattttctaaagtgaacataatattttacaatttcactagcagtctgtagga------gttcctgttcctttacatcttcatcaaca------------------------------------------------------------------------------gttggtatgatcaggcttttaaat-ttttcctttctaataggtatgtcgtgttatctcattgtag-tgttgatttacatttccctaatgactaataatactaaatgtc-ttttataggcctatttgtcatgacatgtct---ttggcatagcatctgttcaaatcttttgtctattttctaattttttttat---atgtttgatcttattg-----atttttg-------aagattctttatgccggatacaatgaattta-tagacatctgactcctg----------tttttcatggtccgtgggttaccttttctttc----tcttaacaagattcttgaaaagcaggtattcttcatttttatgaaattcctcttttcattgttttcttctatggattgtgtttttctattaagtaatcttttctaacccaaagtaat--agtttctgttacatattttcttcta-gaagtttcatagttttaggctcttct-ttgggtctgtagtcctttgtgaattaactttcacctggtatgtaagctctaaagtcttctttttggtttgtttgcttttgcctttgaatattggtatccagttgttctggtacctgttt---aaaatactatt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11300131 700 - 11315646 acttccagactttttttctaaagtgaatgtactattttgcaatcctattagcagcacataggatagcatattccagtcccttcagatatttctcagca------------------------------------------------------------------------------cttcatgtaatcagtcttcttaattttttccattctaataggtatgtggtggtatttcactgtga-ttttgatttacgttttcctaatgacaaatgatattgaacatagtttcttgtgtttatttgtcatcgtatatcttcattgacatag--tgtattcaaa--------ccattctataa---ttggtatttcatgtttaatcttattataagtatttgtgtatcactaagtttctttattctcaatacaatgtctttattaggtatgtgatccctacattttttttttttttacagtctgtggcttgtcttttcttccttaattttaatactatt-ttggagagaagatgttcttaattttaatgaaatgcctcttatcattgttttcctttatgcactgcattttcctattaggtcacctggtctaatcta---tagtccaggttttgtggtgtgatttgttctaggaagtttgatagtttaaggctttaccattgagtccacagccctttttgagttaactttcatgtgatatgtaacgtgtgaagatttctttttggtttgttaacttttgtttttatat----------aatttttgtagtactagttgtttgaaatactatt i otoGar3.GL873580 C 0 I 124 e canFam3.chr16 17015945 1059 - 59632846 I a score=3060969.000000 s hg38.chr4_KI270789v1_alt 203381 538 + 205944 tttctttattaagctgcctttgtacatttataaaagatgaattgatcatatatgtgtaggtctgtttctaaactttctcttctattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtacctttataatgattattgattgctatacgtgcaagatcctcaactttgttgttttgcaaagttgttttgactaccttgggaactttgcatttTTCTAGTAACCC---TGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATCAAACTTTTATAAT-TAAGA---------TATAAGTAGTGTG-AAAGGAGAGAAACATCTTCATTCTAT---CATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGTTAGCACATTACATCTCTATAcagacatgcattcgttaatgatgaggatatgttctgagaaatgcattattaggcaattttgttg---------------------gtgaacatcacagagtgtacttacacagacctagctggtgtag s panTro5.chr4 192988305 547 + 194502333 tttctttattaagctgcctttgtacatttataaaagatgaattgatcatatatgtgtagatctgtttctaaactttctcttctattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtggctttataatgattattgattgctatgcgtgcaagatcctcaactttgttgttttgcaaagttgttttgactaccttgggaactttgcacttTTCTAGTAACCC---TGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATCAAACTTTTATAAT-TAAGATTTTTAAATTATAAGTAGTGTG-AAAGGAGAGAAACATCTTCATTCTAT---CATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGTTAGCACATTACATCTCTATAcagtcatgcattcgttaatgatgaggatatgttctgagaaatgcattattaggcaattctgttg---------------------gtgaacatcacagagtgtacttacccaaacctagctggtatag i panTro5.chr4 C 0 C 0 s panPan2.chr4 192872737 547 + 195804263 tttctttattaagctgcctttgtacatttataaaagatgaattgatcatatatgtgtagatctgtttctaaactttctcttctattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtggctttataatgattattgattgctatgcgtgcaagatcctcaactttgttgttttgcaaagttgttttgactaccttgggaactttgcacttTTCTAGTAACCC---TGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATCAAACTTTTATAAT-TAAGATTTTTAAATTATAAGTAGTGTG-AAAGGAGAGAAACATCTTCATTCTAT---CATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGTTAGCACATTACATCTCTATAcagtcatgcattcgttaatgatgaggatatgttctgagaaatgcattattaggcaattctgttg---------------------gtgaacatcacagagtgtacttacccaaacctagctggtatag i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3904961 547 + 4876863 tttctttattaagctgcctttgtacatttataaaagatgaattgatcatatatgtgtaggtctgtttctaaactttctcttctattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtagcttcataatgattattgattgctgtgcgtgcaagatcctcaactttgttgttttgcaaagttgttttgactaccttgggaactttgcatttTTCTGGTAACCC---TGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATCAAACTTTTATAAT-TAAGATTTTTAAATTATAAGTAGTGTG-AAAGGAGAGAAACATCTTCATTCTAT---CATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGTTAGCACATTACATCTCTATAcagtcatgcattcgttaatgatgaggatatgttctgagaaatgcattattaggcaattttgttg---------------------gtgagcatcacagagtgtacttacacagacctagctggtgtag i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112798814 548 + 115148730 tttctttattaagctgcctttgtacatttataaaagatgaattgatcatatatgtgtaggtctgtttccaaactttctcttctattttattgacgtatttgttggtctcgaggcaaatatcacattgtcttgattattgtagctttataatgattattgattgctatgggtgcaagatcctcaactttgttcttttgcaaagttgttttgactaccttgggaactttgcatttTTCTAGTAACAC---TGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATCGAACTTTTATAATGTAAGATTTTTAAATTATAAGTAATGTG-AAAGGAGAGAAACATCTTCATTCTAT---CATTCAGCACCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGTTAGCACATTACATCTCTATAcagtcatgcattcgttaatgatggggatatgttctgagaaatgcattattaggcaattttgttg---------------------gtgaacatcagagagtgtacttacacaaacctagctggtatag i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3433584 538 + 4669795 ttttt-tattaagatgtctttgtacatttataaaagatgaattgatcatttatatgtaggtctggttctaaactttctcttcgattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtagctttataatgagtattgattgctacaggtgcaagatcttcaactttgttcttttgcacagttgttgtgactaccttaggacctttgcatttTTCTAGGAACCC---GGTTTTGGTATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATTGAACTTTTATAATGTAAGATTTTTAAATTATAAGAAATGTG-AAAGGAGAGAAACATCTTCATTCTAT---TATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTGTAGGCTATCAGAGATAGCACATTACATCTCTATAcagtcatgccttcgttaatgatggggatatgttctgtgaaatgtattattaggcaaatttgtta---------------------gtgaacatcatagagtgtacttacacaaatc---------tag i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134389656 546 + 135778131 ttttt-aattaaactgtctttgtacattcataaaagatgaattgatcatgtatgtgta-gtctgcttctaaactttctcttcgattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgatgattgtagctttataatgattattgattgctataggtgcaagatcttcaactttgttcttttgcaaagttgctgtgactaccttaggacctttgcatttTTCTAGGAACCT---GGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATTGAACTTTTATAATGTAAGATTTTTAAATTATAAGTAATATG-AAAGGAGAGAAACATCTTCATTCTAT---TATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGATAGCACATTATATCTCTATAcagtcatgccttcattaatgatggggataggttctgtgaaatgcattattaggcaattttgtta---------------------gtgaacatcatagagtgtacttacacaaatctaggtggtgtag i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 13646 537 + 1527111 ttttt--attaagatgcctttgtacatttataaaagatgaattgatcatttatgtgtaggtctggttctaaactttctctttgattttattgatgtatttgttgttcttgaggcaaatatcacattgtcttgattattgtagctttataatgagtattgattgctacaggtgcgagatcttcaactttgttcttttgcacagttgttgtgactaccttaggacctttgcatttTTCTAGGAACCC---GGTTTTGGTATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATTGAACTTTTATAATGTAAGATTTTTAAATTATAAGAAATGTG-AAAGGAGAGAAACATCTCCATTCTAT---TATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGATAGCACATTACATCTCTATAcagttatgccttcgttaatgatggggatatgttctgtgaaatgtattattaggcaattttgtta---------------------gcgaacatcatagagtgtacttacacaaatc---------tag i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 955464 548 + 2368649 tttt---attaagctgtctttgtacatttataaaagatgaattgatcatgcatgtgtaggtctggttctaaactttctcttcaattttattgatgtatttgttggtcttgaggcaaatatcacattgtcttgattattgtagctttataatgattattgattgctacaggtgcaagatcttcaactttgttcttttgcaaagttgttgtgactaccttaggacctttgcatttTTCTAGGAACCT---GGTTTTGATATAGATTATTTTGAATAGGGAATGTTTTGACTTAAAAATAATATTGAACTTTTATAATGTAAGATTTTTAAATTATAAGTAATGTG-AAAGGAGAGAAACATCTTCATTCTATTACTATTCAGCCCCTTTCAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGATAGCACATTACATCTCTATAcagccatgccttcattaatgacggggatatgttctgtgaaatgcattattaggcaattttgtta---------------------gtgaacatcatagagtgtacttacacaaatctaggtggtgtag i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13183798 548 - 14256875 tttctttactaagctgcctttgtacatttataaaagatgaattcatcatatatgtgtaggcctatttctaaactctctcttctatttcattgatatatttgttggtctcgaagaaaatatcacattgtcttgattattgtagcttgataataattgttgattgccatgggtgcaagatctccaactttgttcttttgcaaagttgttttaattaccttaagacctttgtatttttctagaaatCC---TGTTTTGACATAGATTATTTTGAATAAAGGGTGTCTGGATTTAAAAATAATATCAAACTTTTATAATTTAAGATCTTTAAATTGTAAGTAATTTG-AAAGCAGATAAACATCTTCATTCTAT---CATTCAGCCCCTTTTAGGAACCTCATCCAACCTCACCACTCTAGGCTATCAGAGATAGCACATTATATCTCTACAcagtcattcattcattcacgatggggatacgttctgagaaatgcattattcggcaattttgttg---------------------gtgaacctcatagagtgtacttacacaaacctggctggtgtag i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1078515 545 - 2196201 tttctttattaagctgcctttgtacatttataaaagatgaattcatcatatatgtgtaggtctatttctaaactctctcttctatttcattgatatatttgttggtctcgaggcaaatatcaca--gtcttgattattgcagcttgataataattattgattgccatgggtgcaagatctccaactttgttcttttgcaaagttgttttaactaccttaagacc-ttgtatttTTCTAGAAATCC---TGTTTTGACATAGATTATTTTGAATAAAGAGTGTCTGGACTTAAAAATAATATCAAACTTTTATAATTTAAGATCTTTAAATTGTAAGTAATGTG-AAAGGAGATAAACATCTTCATTCTAT---CATTCAGCCCGTTTCAGGAACCTCATCCGACCTCACCACTCTAGGCTATCAGAGATAGCACATTTTATCTCTACAcagtcattcattcgttcatgatggggatatgttctgagaaatgcatcattcggcaattttgttg---------------------gtcagcctcatagagtgtacttacacaaacctggctggtgtag i cebCap1.NW_016107886v1 C 0 I 159 s aotNan1.NW_018492112v1 3467867 548 - 5030052 tttctttattaagctgcctttgtacatttataaaagatgaattcatcatatatgtgtaggtctatttctaaactctctcttctatttcattgatatatttgttggtctcgaggcaaatatcacattgtcttgattattgtagcttgataataattattgattgccatgggtacaagatgtccaactttgttcttttgcaaagttgttttaactaccttaagacctttgTATTTTTCTAGAACTCC---TGTTTTGACATAGATTATTTTGAATAAAGAGTGTCTGGATTTAAAAATAATATCAAACTTTTATAATTTAAGATTTTTAAATTGTAAGTAATGTG-AAAGGAAATAAACATCTTCATTCTAT---CAGTCAGCCCCTTTTAAGAACCTCATCCAACCTCACCACTCTAGGCTATGAGACATAGCACATTATATCTCTACAcagtcattcattcattcatgatggggatatgttctgagaaatgcattatttggcaattttgttg---------------------gtgaacctcatagagtgtacttacacaaacctggctggtgtag i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11300955 492 - 11315646 tttattcagtaaattgcctttgcacatt-ataaaagactaattg---------------------------gccctctattccatttccttgatgtagttgtccatcttgatgcaaatatcaccctgcctcaactattgtatctgtatagtaattctcaaatgctactagtgtacaatcttcaattct-------------gttgtcttggctatttcaggacgtttgcattttcctgtgaactCTGATGTTTTGATAAAGATTATTTTGACTAGGGAATGCTTTGAC--ATAAATAATATTAACATT--------TCAGATTTTTAAATTCTTAATAATGTGTGAAGGAGGCAAACATC--------AT---CATTCTCCCCCTTAATGCTGCCTCATTCAA----------------------AACTAGCACATTGCATCTCTATATagttaagcatcacttaacaagagggatttgtcctgaggaatgtatcatgaggtgattttgtcactttattttgttactatatttgtgaatatcacagggtgcccttatagaaacctagatggcacag i otoGar3.GL873580 I 124 C 0 e canFam3.chr16 17015945 1059 - 59632846 I a score=68865.000000 s hg38.chr4_KI270789v1_alt 203919 15 + 205944 cccatcagttacctt s panTro5.chr4 192988852 15 + 194502333 cccatcagtcacctt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192873284 15 + 195804263 cccatcagtcacctt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3905508 15 + 4876863 cccatcagtcacctt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112799362 15 + 115148730 cccaccagtcacctt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434122 15 + 4669795 cccactagtcacctt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134390202 15 + 135778131 cccactagtcacctt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14183 15 + 1527111 cccactagtcacctt i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956012 15 + 2368649 cccactagtcacctt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13184346 14 - 14256875 -ccacgagtcacctt i saiBol1.JH378165 C 0 C 0 s aotNan1.NW_018492112v1 3468415 15 - 5030052 cccactagtcacctt i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11301447 15 - 11315646 cctgttgcccaccga i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1079060 159 - 2196201 I e canFam3.chr16 17015945 1059 - 59632846 I a score=556004.000000 s hg38.chr4_KI270789v1_alt 203934 98 + 205944 ggcaatatggtatagacgattgttcctgggctgcaaacatgtacagcaggttactgcactgaataccgcaggcaattgtaatacaatgataagtattt s panTro5.chr4 192988867 98 + 194502333 ggcaatatggtataggcgattgctcctgggctgcaaacatgtacagcaggttactgcactgaataccgcaggcaattgtaatacaatgataagtattt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192873299 98 + 195804263 ggcaatatggtatagacgattgctcctgggctgcaaacatgtacagcaggttactgcactgaataccgcaggcaattgtaatacaatgataagtattt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3905523 98 + 4876863 ggcaatatggtatagacgattgctcctgggctgcaaacatgtacagcaggttactgcactgaataccgcaggcaattgtaatacgatgataagtattt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112799377 98 + 115148730 ggcaatatggtatagacgattgctcctgggctgcaaacatgtacagcaggttactgcactgaataccgcaggcaattgtaatacaatgatgagtattt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434137 94 + 4669795 ggcaatatggtatagactattgctcctaggttgcaaacacgtacagcaggttactgcactgaataccgcagggaattgtaatacaatg----gtattt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134390217 98 + 135778131 ggcaatatggtatagactattgctcctacgttgcaaacatgtacagcaggttactgcactgagtaccgcagggaattgtaatacaatggtaagtattt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14198 94 + 1527111 ggcaatatggtatagactattgctcctaggttgcaaacacgtacagcaggttactgcactgaataccgcagggaattgtaatacaatg----gtattt i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956027 98 + 2368649 ggcaatatggcatagactattgctcctaggttgcaaacatatacagcaggttactgcactgaacaccgcagggaattgtaatacagtggtaagtattt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13184360 98 - 14256875 ggcaatatggcatagacgactgcacctaggttacaaacatgcacagcgggttactgcgctgaatactgcaggcaatggtaatgcaaaggtaagcattt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1079219 98 - 2196201 ggcaatatggcatagactactgctcctaggttacagacatgcacagcgggctactgcactgagcaccgcaggcaatggtaatacaatgttaagtattt i cebCap1.NW_016107886v1 I 159 C 0 s aotNan1.NW_018492112v1 3468430 98 - 5030052 ggcaatatggcatagactactgctcctaggttataaacatgcaccgcaggttactgcactgaatactgcaggcaatggtaacacagtgttaagtattt i aotNan1.NW_018492112v1 C 0 I 17 s otoGar3.GL873580 11301462 96 - 11315646 ggctatgtggaatagtttcatggtcttgggctacaaacctgcatagcatg--actgtgctgagtactgtaggcagttgtgacatgatggtaagtattt i otoGar3.GL873580 C 0 C 0 e canFam3.chr16 17015945 1059 - 59632846 I a score=84941.000000 s hg38.chr4_KI270789v1_alt 204032 17 + 205944 gtgtatttaaacgtaga s panTro5.chr4 192988965 17 + 194502333 gtgtatttaaacgtaga i panTro5.chr4 C 0 C 0 s panPan2.chr4 192873397 17 + 195804263 gtgtatttaaacgtaga i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3905621 17 + 4876863 gtgtatttaaacgtaga i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112799475 17 + 115148730 gtgtatttaaatgtaga i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434231 17 + 4669795 gtgtatttaaatgtaga i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134390315 17 + 135778131 gtgtatttaaatgtaga i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14292 17 + 1527111 gtgtatttaaatgtaga i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956125 17 + 2368649 gtgtatttaaacgtaga i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13184458 17 - 14256875 ctgtattaaaacataga i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1079317 17 - 2196201 ctgtatttagacataga i cebCap1.NW_016107886v1 C 0 C 0 s otoGar3.GL873580 11301558 17 - 11315646 gtacatctaaacataga i otoGar3.GL873580 C 0 C 0 e canFam3.chr16 17015945 1059 - 59632846 I e aotNan1.NW_018492112v1 3468528 17 - 5030052 I a score=1719651.000000 s hg38.chr4_KI270789v1_alt 204049 310 + 205944 aaaggtacagtacaaatttgatataaaagattaaaaaacagaagacctgcttaagcccattctgttacaatcttatgggaccagcattgtatatgcagagtccatcgtggaccgaaatgtcactgtgtggagcacaactgTATCTCCATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGTGCTTTATAGTATAAAATATACCCTCTTGA-GGCTGAGCCTCAGTAAATACTCATGCTTAGCCACTGTCAGCCTGCTTCTTCCTCTAATC--------------------------TCCAAAA s panTro5.chr4 192988982 311 + 194502333 aaaggtacagtacaaatttgatataaaagattaaaaaacggaagacctgcttaagcccattctgttacaatcttatgggaccagcattgtatatgcagagtccattgtggaccgaaatgtcactgtgtggagcacaactgTATCTCCATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGTGCTTTATAGTTTAAAATATACCCTCTTGAGGGCTGAGCCTCAGTAAATACTCATGCTTAGCCACTGTCAGCCTGCTTCTTCCTCTAATC--------------------------TCCAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192873414 311 + 195804263 aaaggtacagtacaaatttgatataaaagattaaaaaacggaagacctgcttaagcccattctgttacaatcttatgggaccagcattgtatatgcagagtccattgtggaccgaaatgtcactgtgtggagcacaactgTATCTCCATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGTGCTTTATAGTTTAAAATATACCCTCTTGAGGGCTGAGCCTCAGTAAATACTCATGCTTAGCCACTGTCAGCCTGCTTCTTCCTCTAATC--------------------------TCCAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3905638 309 + 4876863 aaaggtatagtacaaatttgatataaaagatt-aaaaacggaagacctgcttaag-ccattctgttagaatcttatgggaccagcattgtatatgcagagtccatcgtggactgaaatgtcactgtgtggagcacaactgTATCTCCATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGTGCTTTATAGTTTAAAATATACCCTCTTGAGGGCTGAGCCTCAGTAAATACTCATGCTTAGCCACTGTCAGCCTGCTTCTTCCTCTAATC--------------------------TCCAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112799492 311 + 115148730 aaaggtacagtacaaatttgatgtaaaagattaaaaaccggaagacctgcataagcccattctgttacaatcttatgggaccagcattgtatatgcagagtccatcgtggactgaattgtcattgtgtggagcacagctgTATCTCTATCCATACTGACACACACACGCCTTCTGAAACCCATGCCCACAACCATCCTGGTATCTGTATATTGGTGCTTTATAGTTTAAAATACACCCTTTTGAGTGCTGAGCCTCAGCAAATACTCATGCTTAGCCACTGTCAGCCTGCATCTTCCTCTAATC--------------------------TCCAAAA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434248 308 + 4669795 aaaggtacagtacaaattggacataaaagatt-aaaaatggaagacctgcataagtgcattccattacaatcttatgggaccagcagtgtatatgc--agtccatcgtgaactgaaatgtcattgtgtggagcacgactgTATCTCTATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGCGTTTTATAGTTTAAAATATACCCTCTTGAGGGCTGAACGTCAGCAAATACTCATGCTTAGCCACTGTCAGCCTGTTTCTTCCTCTATTC--------------------------TCCAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134390332 308 + 135778131 aaaggtacagtacaaattggatataaaagatt-aaaaatggaagacctgcataagcacgttccattacaatcttatgggaccagcagtgtatatgt--agtccatcgtgaactgaaatgtcattgtgtggagcacgactgTATCTCTATCCATACGGACACACACATGCCTTCTGAAACTCATGCCTACAACCATATTGGTATCTGTATATTGGTGTTTTATAGTTTAAAATATACACTCTTGAGGGCTGAGCCTCAGCAAATACTCATGCTTAGCCACTGTCAGCCTGCTTCTTCCTCTATTC--------------------------TCCAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14309 308 + 1527111 aaaggtacagtacaaattggacataaaagatt-aaaaatggaagacctgcataagtgcattccattacaatcttatgggaccagcagtgtatatgc--agtccatcgtgaactgaaatgtcattgtgtggagcacgactgTATCTCTATCCATACTGACACACACACGCCTTCTGAAACCCATGCCTACAACCATATTGGTATCTGTATATTGGTGTTTTATAGTTTAAAATATACCCTCTTGAGGGCTGACCCTCAGCAAATACTCATGCTTAGCCACTGTCAGCCTGTTTCTTCCTCTATTC--------------------------TCCAAAA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956142 308 + 2368649 aaaggtacagtacaaattggatataaaagatt-aaaaatggaagacctgcataagtgcattccattacaatcttatgggaccagcagtgtatatgc--agtccatcgtgaactgaaatgtcattgtgtggagcaggactgTATCTCTATCCGTACTGACACACACACGCCTTCTGAAACCCATGCCTACAATCATGTTGGTATCTGTATACTGGTGTTTTATAGTTTAAAATACACCCTCTTGAGGGCTGAGCCTCAGCAAATACTCATGCTTAGCCACTGGCAGCCTGCTTCTTCCTCTATTC--------------------------TCCAAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13184475 330 - 14256875 aaaggtacaggataaatttgatatgcaagatt-aaaaatcaaagacctgcgtaaccccattccatgacaaccttatgggaccactattgtatatgc--agtccatcatggactgaaatgtcattgtgcggaacacaactgTATCTCTATCCATGCTGACACACATACACATCCTGAAACCCCTGCCTACAACGGTATTGGTATCCGTATATTGGTGC-TTACAGTTTAAAATATACCCTCTTGAGGGCTTCGCCACAGCGAATACTCATGCTTAGGCACTGTCAACCCGCCTCTTCCTCTAATCTCCACAAACTG---CTTCTTCGAATCTCCAAAA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1079334 332 - 2196201 aaaggcacagtacaaatctgatataaaagatt-aaaaatcgaagacctgcataACCCCATtccatgacagccttatgggaccactgttgtatatgc--agtccatcatggattgaaatgtcgttgtgtggaacacaactgTATCTCTATCCATACTGACACACATACACATTCCGAAACCCCTGCCTACAACCGTTCTGGTATCTGTATATTGGTGC-TTACAGTTT-AAATATACCCTCTTGAGGGCTGAGCCTCAGCAAATACTCATGCTTAGGCACTGTCAACCCGCTTCTTCCTCTAATCTCCACAGCCTGCTTCTTCTTCTAATCTCCAAAA i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3468545 309 - 5030052 aaaggtacagtacaaatttgatataaaagatt-aaaaatcgaagactggcataaccccattccatgacaaccttatgggaccactattgtatatgc--agtccatcaagggctgaaatgtcattgtgtggaacacaactgTATCTCTATCCATACTGACACACATACACATTCTGAAACCCCTGCCTACAACCGTATTGGTATCTGTATATTGGTGC-TTACAGTTT-AAATATACCCTCTTGAGGGCTTTGCCTCAGCAAATACTCATGCTTAGGCACTGTCAACCCGCTTCTTCCTCTAATC-----------------------GTCTCCAAAA i aotNan1.NW_018492112v1 I 17 C 0 s otoGar3.GL873580 11301575 298 - 11315646 aaaggtacagtaagaattcaatataaaagatt-aaaagtggtgcacctgtagacgacctctccatt-taatcttatgggactgttgtcacatacgt--agt-------ggacccaaatgtcattacatgg-gcatgactgTGCCCTTACTCATACTGATGTCCATACCTATTCTGAACCTCATGCCTACAACTATGTTCATATCCATATATTGATGCTTTAAAGT-TAAAATCTGCCCCTTTGAAGACAGAGCTGCAGCAAATATTCAAGCTTAGCCACTGTCATCCTCCTTCCTCCTCTAACC--------------------------TCCAAAA i otoGar3.GL873580 C 0 C 0 e canFam3.chr16 17015945 1059 - 59632846 I a score=1932954.000000 s hg38.chr4_KI270789v1_alt 204359 337 + 205944 TGAAGTAAGTTCATTGA--CAGCACTGGAGATGCCTGCATTGCTGGATTTACACTCTATTTTATTATTAAAGAAAGGG--------TTTTTTTCTCCCTAAAGATATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTCTTTGATAGGCATAGAGGGCAGTATGGT--------------GGAAGTATTCTGCCTGTCTGTGAGTATTTTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATACTATTACTGTTTCCTTTCCAATCTTAGACTGCTGAATTCTGAATAAATCTCTCACCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ s panTro5.chr4 192989293 337 + 194502333 TGAAGTAAGTTCGTTGA--CAACACTAGAGATGCCTGCATTGCTGGATTTACACTCTATTTTATTATTAAAGAAAGGG--------TTTTTTTCTCCCTAAAGATATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTCTTTGATAGGCATAGAGGGCAGTATGGT--------------GGAAGTATTCTGCCTTTCTGTGAGTATTTTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATACTATTACTGTTTCCTTTCCAATCTTAGACTGCTGAATTCTGAATAAATCTCTCACCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i panTro5.chr4 C 0 C 0 s panPan2.chr4 192873725 337 + 195804263 TGAAGTAAGTTCGTTGA--CAACACTAGAGATGCCTGCATTGCTGGATTTACACTCTATTTTATTATTAAAGAAAGGG--------TTTTTTTCTCCCTAAAGATATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTCTTTGATAGGCATAGAGGGCAGTATGGT--------------GGAAGTATTCTGCCTTTCTGTGAGTATTTTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATACTATTACTGTTTCCTTTCCAATCTTAGACTGCTGAATTCTGAATAAATCTCTCACCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3905947 337 + 4876863 TGAAGTAAGTTCATTGA--CAACACTAGAGATGCCTGCATTGCTGGATTTACACTCTATTTTATTATTAAAGAAAGGG--------TTTTTTTCTCCCTAAAGATATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTCTTTGATAGGCATAGAGGGCAGTATGGT--------------GCAAGTATTCTGCCTGTCTGTGAGTATTTTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATACTATTACTGTTTCCTTTCCAATCTTAGACTGCTGAATTCTGAATAAATCTCTCACCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112799803 337 + 115148730 TAAAGTAAGTTCATTGA--CAGCAGTAGAGATGCCTGCATTGCTGGATTTACACTCTGTTTTATTATTAAAGAAAGGA--------ATTTTTTCTCCCAAAAGATATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTCTTTGATAAGCATAGAAGGCAGTATGGT--------------GGAAGTATTCTGCCTATCTGTGAGTATATTAAAAAATGGAAAATGTTGGAAATAAATTTCTTGTGCATTTACT----------------------------TTTTCTGAAATACTATTACTATTTCCTTTCCAATCTTGGACTGCTGAATTCTGAATAAATCTCTCACCTTCGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i nomLeu3.chr7b C 0 I 31 s cerAty1.NW_012001672v1 3434556 345 + 4669795 TCAA-TAAGTTCATTGA--CAGCAGTAGAGATGACTGCATTGCTGGATTTATACTCTATATTATTATTCAAGAAAGGG-----TTTTTTTTTTCTCCCAAAAGATACCCCTACTTTTATTCATCTTTTCTGGCTCATTATTTTTCTTTGATAGGCATAGAGAGCTCTTCCATCTACAG--------GGAAGTATTCTGCCTATCTGTGAGTATATTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATGCTATTACTGTTTCCTTCCCAATCTTGGACTTCTGAATTCTGAATAAATCTCTCCCCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i cerAty1.NW_012001672v1 C 0 I 1 s chlSab2.chr7 134390640 343 + 135778131 TCAAGTAAGTTCATTGA--CAGCAGTAGAGATGACTGCATTGCTGGATTTATACTCTATATTATTATTCAAGAAAGGG-------TTTTTTCCCTCCCAAAAGATGCCCCTATTTCTATTCATCTTTTCTGGCTCACTATTTTTCTTTGATAGGCATAGAGAGCTCTTCCATCTACAG--------GGAAGTATTCTGCCTATCTGTGAGTATATTAAAAAATGGAAAATGTTGGAGATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATGCTATTACTGTTTCCTTCCCAATCTTGGACTTCTGAATTCTGAATAAATCTCTCCCCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTG-A------ i chlSab2.chr7 C 0 I 1 s manLeu1.NW_012107108v1 14617 345 + 1527111 TCAAGTAAGTTCATTGA--CAGCAGTAGAGATGACTGCATTGCTGGATTTATACTCTATATTATTATTCAAGAAAGGG------TTTTTTTTTCTCCCAAAAGATACCCCTACTTTTATTCATCTTTTCTGGCTCATTATTTTTCTTTGATAGGTATAGAGAGCTCTTCCATCTACAG--------GGAAGTATTCTGCCTATCTGTGAGTATATTAAAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATGCTATTACTGTTTCCTTCCCAATCTTGGACTTCTGAATTCTGAATAAATCTCTCCCCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i manLeu1.NW_012107108v1 C 0 I 1 s colAng1.NW_012116221v1 956450 344 + 2368649 TCAAGTAAGTTCATTGA--CAGTAGTAGAGATGACTGCATTGCTGGATTTATACTCTATATTATTATTCAAGAAAGGG------TTATTTTTTCTCCCAAAAGATACCCCTATTTCTATTCATCTTTTCTGGCTCATTATTTTCCTTTGATAGGCATAGAGAGCTCTTCCATCTACAG--------GGAAATATTCTGCCTATCTGTGAGTATATT-AAAAATGGAAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATGCTATCACTGTTTCCTTCCCAATCTTGGACTTCTGAATTCTGAATAAATCTCTCCCCTTTGTGGTTTTCTTGAAGTAGACCTTAATTTGAA------ i colAng1.NW_012116221v1 C 0 I 4 s saiBol1.JH378165 13184805 345 - 14256875 TCAAGTAAGTTCATTGA--CAGCAGCAGAGATGCCTGCATTGCTGGATTTACACTC--CCTTACTATTAAAGAAGGGG---------GTTTTTCTCCCAAAAGACATCCCGATTTCTATTAATCTTTTCTAGCTCATTATTTTTC-CTGATAGGCACAGAGAGCTCTTCCATCTACAAGTATGG-TAGAAGTATTCTGCCTGTCTGTGAGTATATTAAAAAATGGGAAATGCTGGAAATCAATGTTTTGTGCATTTACT----------------------------TTTTCTT-AATGCGCTTTCTGTTTCTTGTCCAATCTTGGACTGCTGAATTCTGAATAAGTATCTCACCTTTGCGGTTTTCATGAAGCAGACCTTAATTCGAA------ i saiBol1.JH378165 C 0 I 6 s cebCap1.NW_016107886v1 1079666 346 - 2196201 TCAAGTAAGTTCATTGA--CAGCAGCAGAGATGCCTGCATTGCTGGATTTACACTC--CCTTACTATTAAAGAAAGGA---------GTTTTTCTCCCAAAAGAAATCCCTATTTCTATTAATCTTTTCTGCCTCATTATTTTTC-TTGATAGGCACAGAGAGTTCTTCCATCTACAGGTATGG-TAGAAGTGTTCTGCCTGTCTGTGAGTATATTAAATAATGGGAAATGTTGGAAATCAATTTATTGTGCATTTACT----------------------------TTTTCTTAAATGCGCTTACTGTTTCTTGCCCAATCTTGGACTGCTGAATTCTGAATAAATATCTCGCCTTTGTGGCTTTCATGAAGCAGACCTTAATTTGAA------ i cebCap1.NW_016107886v1 C 0 I 45 s aotNan1.NW_018492112v1 3468854 346 - 5030052 TCAAGTAGGTTCATTGA--TGGCAGCAGAGATGCCTGCGTTGCTGGATTTATACTC--CCTTATTATTAAAGAAAGAG---------GTTTTTCTCCCAAAAGACATCCCTATTTCTATTAATCTTTTCTGGCTCATTATTTTTC-TTGATAGGCATAGAGAGCTCTTCCATCTACAGGTATGG-TAGAAGTATTCTGTCTGTCTGTGAGTATATTAAAAAACGGGAAATGTTGGAAATCAATTTCTTGTGCATTTACT----------------------------TTTTCTTAAATACACTTACTGTTTCTTGCCCAATCTTGGACTGCTGAATTCTGAATAAATATCTCACCTTTGTGGTTTTCATGAAGCAGACCTTAATTTGAA------ i aotNan1.NW_018492112v1 C 0 I 39 s otoGar3.GL873580 11301873 325 - 11315646 TCAAGTCACTTCTTTGA--AAGCAGCAGAGATGCCTCCATTCCTGGATTTATACTCTATTTTGTTATTTAAAAA-------------TTTT------CAAAAGAAATCCCTGTTTCTATTAATCTTTTCTGGCTCATCGTTATTCTTCTGTC--TACAGAGAGCTCTTCTGTTTACAAGTATAG-GTGAAGTACTGTGCCTATC--TGAGTATTTCACGAAATGGAAAATGTTAAAAATCAGATTCTTATGCATTTAC-----------------------------TTTTCTTAA---CAGTTACTATCTCATTCTGGATATTTGACTACTGAATGCTAGATGAAT------CATCAGCAATTTTCATGAAATAGACCTTAAATTGAA------ i otoGar3.GL873580 C 0 I 1 s canFam3.chr16 17017004 376 - 59632846 tgaggaaactccaatgaagctctggGAGAGATGCTTTCGTTTTCAGATTTACACTCTTTTTTTTTTTTAA-------GTCCTTTTTATTTGTTTTCTCCAAAAGAGTTCCTACTTC-ATTAATCTGTTCTACCTCATTCTTTT---TTGATAGGCACAGAGAGTTCTTGCATCTACGAGGATTGTTGAAAATATAGTAGCTACTTATGAGACTACC-ATGAATGGAAAAGGTTGAAAATCAATTTTTGATATCTATATCtagatagatagatagatttatagatagatTTCCACAAATAGTTTTACTGTTATATTCCTAGTCT----CTGCTGAATGTGAGATGAATCTT---ACTTTGTGGTTTTCTTGAAACAGAACCtaatttaaaataata i canFam3.chr16 I 1059 C 0 a score=4243.000000 s hg38.chr4_KI270789v1_alt 204696 7 + 205944 ttttttt s panTro5.chr4 192989630 4 + 194502333 ---tttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874062 1 + 195804263 ------t i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906284 2 + 4876863 -----tt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800171 7 + 115148730 tatatat i nomLeu3.chr7b I 31 C 0 s cerAty1.NW_012001672v1 3434902 7 + 4669795 ttttttt i cerAty1.NW_012001672v1 I 1 C 0 s chlSab2.chr7 134390984 7 + 135778131 TTTTGCT i chlSab2.chr7 I 1 C 0 s manLeu1.NW_012107108v1 14963 7 + 1527111 ttttttt i manLeu1.NW_012107108v1 I 1 C 0 s colAng1.NW_012116221v1 956798 7 + 2368649 ttttttt i colAng1.NW_012116221v1 I 4 C 0 s saiBol1.JH378165 13185156 6 - 14256875 -tttttt i saiBol1.JH378165 I 6 I 1 s otoGar3.GL873580 11302199 6 - 11315646 CATTTT- i otoGar3.GL873580 I 1 I 1 s canFam3.chr16 17017380 7 - 59632846 tttcttt i canFam3.chr16 C 0 C 0 e cebCap1.NW_016107886v1 1080012 45 - 2196201 I e aotNan1.NW_018492112v1 3469200 39 - 5030052 I a score=35436.000000 s hg38.chr4_KI270789v1_alt 204703 11 + 205944 ttttttttttt s panTro5.chr4 192989634 11 + 194502333 ttttttttttt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874063 11 + 195804263 ttttttttttt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906286 11 + 4876863 ttttttttttt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800178 11 + 115148730 atttttttttt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434909 11 + 4669795 tgttttttttt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134390991 11 + 135778131 CGtttttcttt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14970 11 + 1527111 tgttttttttt i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956805 11 + 2368649 ttttttttttt i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11302206 10 - 11315646 TTTGGTTTTT- i otoGar3.GL873580 I 1 C 0 s canFam3.chr16 17017387 11 - 59632846 tttttttcttt i canFam3.chr16 C 0 I 1 e cebCap1.NW_016107886v1 1080012 45 - 2196201 I e aotNan1.NW_018492112v1 3469200 39 - 5030052 I e saiBol1.JH378165 13185162 1 - 14256875 I a score=850313.000000 s hg38.chr4_KI270789v1_alt 204714 284 + 205944 gacagagtctcacactgttgcccaggcgggagtgcagtggcacaatctcggctcactgaaacctccacctcccaggttcaagcgattctcctgcctcagcctcttgagtaactgggattacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagatggggtttcactatgttggccaggctggtctcgaacacctgacctcatgatccatctgcctcag-ctcccaaagtgctgggattacaggtgtgagccactgcacccagccGAAATA s panTro5.chr4 192989645 285 + 194502333 gacggagtctcacactgttgcccaggcgggagtgcagtggcgcaatctcggctcactgaaacctccacctcccaggttcaagcgattctcctgcctcagcctcttgagtaactgggattacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagatggggtttcactatgttggccaggctggtctcgaacacctgacctcatgatccatctgcctcagcctcccaaagtgctgggattacaggtgtgagccactgcacccagccGAAATA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874074 285 + 195804263 gacggagtctcacactgttgcccaggcgggagtgcagtggcgcaatctcggctcactgaaacctccacctcccaggttcaagcgattctcctgcctcagcctcttgagtaactgggattacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagatggggtttcactatgttggccaggctggtctcgaacacctgacctcatgatccatctgcctcagcctcccaaagtgctgggattacaggtgtgagccactgcacccagccGAAATA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906297 285 + 4876863 gacggagtctcacactgttgcccaggcgggagtgcagtggcgcaatctcggctcactgaaacctccacctcccaggttcaagcgattctcctgcctcagcctcttgagtaactgggattacaggtgcccgccaccatgcccggctaattttttgtatttttagtagagatggggtttcactatgttggccaggctggtctcgaacacctgacctcatgatccatctgcttcagcctcccaaagtgctgggattacaggtgtgagccactgcacccagccGAAATA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800189 285 + 115148730 tatggagtctcacactgtcaccgaggctggagtgcagtggcacgatctcagctcactgcaagctccacctcccaggttcaagcgattctcctgcctcagcctcttgagtaactgggattacaggcacctgccaccatgcccggctacttttttgtatttttagtagagatggggtttcactatgttggccaggctggtctcgaacacctgacctcatgatccatctgcctcggcttcccaaagtgctaggattacaggcgtgagccactgcacccagccGAAATA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3434920 284 + 4669795 gactgagtctcacactgttgcccaggctggagtgcaatggcacaatctcggctcactgcaagctccacctcccaggttcaagggattctcctgcctcagcctcttgagtaactgggatt-caggcgcccatcaccacacccagctaactttttgcatttttagtagagacaggttttcactatgttgcccagcctggtctggaacacctgacctcgtgatccacctgcctcggcctcccgaagtgctgggattacaggcgtgagccactgcacccagcAAAAATA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391002 284 + 135778131 gaccgagtctcacactgttgcccaggctggagtgcaatggcacaatctcagctcactgcaagctccacctcccaggttcaggcgattctgctgcctcagcctcttgagtaactgggatt-caggcgcccaccaccacgcccagctaactttttgtatttttagtagagacagggtttcgctatgttgcccagcctggtctggaacgcctgtcctcgtgatccatctgcttcagcctcccgaagtgctgggattacaggcctgagccactgcacccagccAAAATA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 14981 283 + 1527111 gactgagtctcacactgttgcccaggctggagtgcaatggcacaatctcggctcactgcaagctccacctcccaggttcaagggattctcctgcctcagcctcttgagtagctgagatt-caggcgcccatcaccacgtccagctaactttttgcatttttagtagagacagggtttcactatgttgcccagcct-gtctggaacacctgacctcatgatccatctgcctcggcctcccgaagtgctgggattacaggcgtgagccactgcacccagccAAAATA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 956816 284 + 2368649 tactgagtctcacactgttgctcaggctggagtgtaatggcacaatcttggctcactgcaagctccacctcccaggttcaagctattctcctgcctcagcctcttgagtaactgggatt-caggtgctcaccaccacgcccagctaactttttgtatttttagtagagacggggtttcactatgttggccagcctggtctggaacacctgacctcgtgatccatctgcctcggccttccgaagtgctgggattacaggtgtgagccactgcacccagccAAAATA i colAng1.NW_012116221v1 C 0 C 0 e cebCap1.NW_016107886v1 1080012 45 - 2196201 I e canFam3.chr16 17017398 1 - 59632846 I e aotNan1.NW_018492112v1 3469200 39 - 5030052 I e saiBol1.JH378165 13185162 1 - 14256875 I e otoGar3.GL873580 11302216 0 - 11315646 C a score=2997.000000 s hg38.chr4_KI270789v1_alt 204998 1 + 205944 T s panTro5.chr4 192989930 1 + 194502333 t i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874359 1 + 195804263 T i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906582 1 + 4876863 T i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800474 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435204 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391286 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15264 1 + 1527111 t i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957100 1 + 2368649 t i colAng1.NW_012116221v1 C 0 C 0 s otoGar3.GL873580 11302216 1 - 11315646 C i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1080012 45 - 2196201 I e canFam3.chr16 17017398 1 - 59632846 I e aotNan1.NW_018492112v1 3469200 39 - 5030052 I e saiBol1.JH378165 13185162 1 - 14256875 I a score=111137.000000 s hg38.chr4_KI270789v1_alt 204999 36 + 205944 tttct-tttctttttctttctttccttctttTTAAAA s panTro5.chr4 192989931 33 + 194502333 t---t-tttctttttctttctttccttctttTTAAAA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874360 36 + 195804263 tttct-tttctttttctttctttccttctttTTAAAA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906583 36 + 4876863 tttct-tttctttttctttctttccttctttTTAAAA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800475 36 + 115148730 Tttcc-tttctttttctgtctttccttctttTAAAAA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435205 37 + 4669795 tttctttttttttttctttcttttcttctttttAAAA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391287 36 + 135778131 TTTCC-TTTTTTTCCCTTTCTTTTCTTCTTTTTAAAA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15265 37 + 1527111 tttccttttttttttctttcttttcttctttttAAAA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957101 36 + 2368649 tttct-tttttttttctttcttttcttctttttAAAA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13185163 36 - 14256875 tttct-ttcctttttcttcttcttctttttttttttt i saiBol1.JH378165 I 1 C 0 s otoGar3.GL873580 11302217 22 - 11315646 ------TTTCTTTTTTTTCTCTTCCTAC--------- i otoGar3.GL873580 C 0 C 0 e cebCap1.NW_016107886v1 1080012 45 - 2196201 I e canFam3.chr16 17017398 1 - 59632846 I e aotNan1.NW_018492112v1 3469200 39 - 5030052 I a score=14196.000000 s hg38.chr4_KI270789v1_alt 205035 2 + 205944 AA s panTro5.chr4 192989964 2 + 194502333 AA i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874396 2 + 195804263 AA i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906619 2 + 4876863 AA i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800511 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435242 2 + 4669795 AA i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391323 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15302 2 + 1527111 AA i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957137 2 + 2368649 AA i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13185199 2 - 14256875 AA i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1080057 2 - 2196201 AA i cebCap1.NW_016107886v1 I 45 C 0 s aotNan1.NW_018492112v1 3469239 2 - 5030052 AA i aotNan1.NW_018492112v1 I 39 C 0 s otoGar3.GL873580 11302239 2 - 11315646 AA i otoGar3.GL873580 C 0 C 0 e canFam3.chr16 17017398 1 - 59632846 I a score=655323.000000 s hg38.chr4_KI270789v1_alt 205037 100 + 205944 ATTCTGTAGCTGATCCCTGATGGCTTTTAATTTGAATAAAACTTTATTTAAAGAAAGTGTTTATTCATTGATACG---AA---TCACACAGAGTATAATTTCAAGC s panTro5.chr4 192989966 100 + 194502333 ATTCTGTAGCTGATCCCTGATGGCTTTTAACTTGAATAAAACTTTATTTAAAGAAAGTGTATATTCATTGATACG---AA---TCACACAGAGTATAATTTCAGGC i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874398 100 + 195804263 ATTCTGTAGCTGATCCCTGATGGCTTTTAACTTGAATAAAACTTTATTTAAAGAAAGTGTATATTCATTGATACA---AA---TCACACAGAGTATAATTTCAAGC i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906621 100 + 4876863 ATTCTGTAGCTGATCCCTGATGGCTTTTAACTTGAATAAAACTTTATTTAAAGAAAGTGTTTATTCACTGATACG---AA---TCACACAGAGTATAATTTCAAGC i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800513 98 + 115148730 ATTCTGCAGCTGATCCCTGATGGCTTTTAACTTGAATAAAATTTTATTTAAAGGAAGTGTTTATTCATTGATACG---AA---TCGCAC--AGTATAATTTCAAGC i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435244 100 + 4669795 ATTCTGTAGCTGAGCCCTGGTGGCTTTTAACTTGAATAAAATTTTATTTAAAGAAAATGTTTATTCATTGATACG---AA---TCACACAGAGTATAATTTCAAGC i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391325 100 + 135778131 ATTCTGTAGCTGAGCCCTGATGACTTTTAACTTGAATAAAATTTTATTTAAAGAAAATGTTTATTCATTGATACG---AA---TCACACAGAGTATAATTTCAAGG i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15304 100 + 1527111 ATTCTGTAGCTGAGCCCTGATGGCTTTTAACTTGAGTAAAATTTTATTTAAAGAAAATGTTTATTCATTGATACG---AA---TCACACAGAGTATAATTTCAAGC i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957139 100 + 2368649 ATTCTGTAGCTGAGCCCTGATGGCTTTTAACTTGAATAAAATTTTATTTAAAGAAAATGTTTATTCATTGATATG---AA---TCACACAGAGTATAATTTCAAGC i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13185201 100 - 14256875 ATTCTGTAGCTGATCCTTGATGGTTTTTAACTTGAATACAATTTTATTTAAAGAAAGTGTTTATTCATTGGTATG---AA---TCACACAGAGTATActttgtagc i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1080059 100 - 2196201 ATTCTGTAGCTGATCCTTGGTGGCTTTTAACTCACATACAATTTTATTTAAAGGAAGTGTTTATTCATTGGTATG---AA---TCACACAGAGTATAATTTctagc i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3469241 100 - 5030052 ATTCTGTAGCTGATCCTTGATGGCTTTTAACTTGAATACAATTTTATTTAAAGAAAGTGTTTATTCATTGGTATG---AA---TCACACAGAGTATAATTTctagc i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11302241 103 - 11315646 ATTCTATAGCTGATCCCTGATGGTTTTGAATTTGAATCAAGTTTTCTGTAAAGAAACTGTTTATTCATTGCTTTGTGTAT---TCACACAGGTTATAGTTTTAAGC i otoGar3.GL873580 C 0 C 0 s canFam3.chr16 17017399 99 - 59632846 attCTGTAGCTGGTCCCTGATGTCTTTTAGTGTGA----AGTCTCATTTTGAGAAAACATTTATTCCTTTATCTC---TATTTTCACACTGATTATAGTTTTAagc i canFam3.chr16 I 1 N 0 a score=278719.000000 s hg38.chr4_KI270789v1_alt 205137 47 + 205944 CCATTACcatgaagatattttcctatgttttactccagaatttttaa s panTro5.chr4 192990066 47 + 194502333 CCATTACTatgaagatattttcctatgttttactccagaatttttaa i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874498 47 + 195804263 CCATTACTatgaagatattttcctatgttttactccagaatttttaa i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906721 47 + 4876863 CCATTACcatgaagatattttcctatgttttactccagaatttttaa i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800611 47 + 115148730 CCGTTACcatgaagatattttcctgtgttttacttcagaattttaaa i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435344 47 + 4669795 CCATTACcatgaagatattttcctatgttttacttctgaattttaaa i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391425 47 + 135778131 CCGTTACcatgaagatattttcctatgttttacttctgaattttaaa i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15404 47 + 1527111 CCATTACcatgaagatattttcctatgttttacttctgaattttaaa i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957239 47 + 2368649 CCATTACcatgaagatattttcctatgttttactcctgaattttaaa i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13185301 47 - 14256875 ccattatcataaaggtattttcctatgttttactccacaattttaaa i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1080159 47 - 2196201 ccactatcatgaagatattttcctatgttttactccagagttttaaa i cebCap1.NW_016107886v1 C 0 C 0 s aotNan1.NW_018492112v1 3469341 47 - 5030052 ccattatcatgaagatattttcctatgttttactccagaattttaaa i aotNan1.NW_018492112v1 C 0 C 0 s otoGar3.GL873580 11302344 46 - 11315646 CCATTACCATGAAGATATTTTCCTTTTATTTCCCCCAAttttttaa- i otoGar3.GL873580 C 0 N 0 a score=3655601.000000 s hg38.chr4_KI270789v1_alt 205184 759 + 205944 ttattttatctttcaaatttagatctatattccagctagaat---------------------------tgtgtgtgtgtgtgtgtgtgtgtgtgatgtgaaggtcaaagtttatttttc--tttttttacatataaatatgtaattgatccagcaccacttaatgaaaagactactcttttcagccactctcaggtggtacctacgtcgtgacccaagtgactgagtatcgagtcggtctggttttcaactttctattcagttcggttgctctGTAGTTCCCCCCTTGATGGTTTACATTGTCTGTGAATATTGACAGTTATAGTTCTTACTTTACCATTCTTTTAAGGAATCAtttgaaaaattcacatattggtgaagccatacaggcttagagttttctttgtggcaagtttcc-taatgacagatttaatttctttaatagatacaatatat---tccaaatagatttttttcaatgagttttggtaagctatatttttctaggaatttgacaatttcttctaaattttgaaatatattggtatataggtcaaaaaattgtatgtctttatctttttaatatatgtaatgtctgttgggatgtacctttttaaaaatttcttatattattcatttctcttttctggcctgatcctagcaattgttatagggagtttataaaaattattcgtctttttagggaaataaatttttgctttttaatttttctactatatgtttgttACTTCATCAAATTTAAATTAAATTTTTTTGGATTAACCTACATT s panTro5.chr4 192990113 748 + 194502333 ttattttatctttcaaatttagatctatattccagctagaat---------------------------------tgtgtgtgtgtgtgtgtgtgatgtgaaggtcaaagtttatttttc--tttttttacatataaatatgtaattgatccagcaccacttaatgaaaagactactctttccagccactctcaggtggtacctacgtcgtgacccaagtgactgagtatcgagtcggtctggttttcaactttctattcagttcggttgctctgtagttccctccttgatggtttacattgtctgtgaatattgACAGTTATAGTTCTTACTTTACCATTCTTTTAAGGAATCAtttgaaaaattcacatattggtgaagccatacaggcttagagttttctttgtggcaagtttcc-taatgacagatttaatttctttaatagatacaatgtat---tccacatagatttttttcaatgagttttggtaagctatatttttctaggaatttgacaa-----tctaaattttgaaatatattggtatataggtcaaaaaattgtatgtctttatctttttaatatatgtaatgtctgttgtgatatacctttttaaaaatttcatatattattcatttctcttttctggcctgatcctagcaattgttatagggagtttataaaaattattagtctttttagggaaataaatttttactttttaatttttctactatatgtttgttacttcatcaaatttaaatttaatttttttggattaacctacatt i panTro5.chr4 C 0 C 0 s panPan2.chr4 192874545 750 + 195804263 ttattttatctttcaaatttagatctatatgccagctagaat-------------------------------tgtgtgtgtgtgtgtgtgtgtgatgtgaaggtcaaagtttatttttc--tttttttacatataaatatgtaattgatccagcaccacttaatgaaaagactactctttccagccactctcaggtggtacctacgtcgtgacccaagtgactgagtatcgagtcggtctggttttcaactttctattcagttcggttgctctgtagttccctccttgatggtttacattgtctgtgaatattgACAGTTATAGTTCTTACTTTACCATTCTTTTAAGGAATCAtttgaaaaattcacatattggtgaagccatacaggcttagagttttctttgtggcaagtttcc-taatgacagatttaatttctttaatagatacaatatat---tccacatagatttttttcaatgagtcttggtaagctatatttttctaggaatttgacaa-----tctaaattttgaaatatattggtatataggtcaaaaaattgtatgtctttatctttttaatatatgtaatgtctgttgtgatatacctttttaaaaatttcatatattattcatttctcttttctggcctgatcctagcaattgttatagggagtttataaaaattattagtctttttagggaaataaatttttactttttaatttttctactatatgtttgttacttcatcaaatttaaatttaatttttttggattaacctacatt i panPan2.chr4 C 0 C 0 s gorGor5.CYUI01015356v1 3906768 751 + 4876863 ttattttatctttcaaatttagatctatattccagctagaat-----------------------------------tgtgtgtgtgtgtgtgtgatgggaaggtcaaagtttgtttttc--tttttttacatataaatatgtagttgatccagcaccacttaatgaaaagactactcttttcagccactctcaggtggtacctacgtcgtgacccaagtgactgagtatcgagtcggtctggttttcaactttctattcagttctgttgctctgtagttccctccttgatggtttacattgtttgtgaatactgACAGTTATAGTTCTTACTTTACCATTCTTTTAAGGAATCAtttgaaaaattcacatattggtgaagccatacaggcttagagttttctttgtggcaaatttcc-taatgacagatttaacttctttaatagatacaatatat---tccaaatagatttttttcagtgagttttggtaagctatatttttctaggaatttgacaatttcttctaaattttgaaatatattggtatataggtcaaaaaattgtatgtctttatgtttttaatatatgtaatgtctgttgtgatgcacctctttaaaaatttcatatattattcatttctcttttctggcctgatcctagcaattgttatagggagtttataaaaattattagtctttttagggaaatacatttttgctttttaatttttctactatatgtttgttacttcatcaaatttaaatttaatttttttggattaacctacatt i gorGor5.CYUI01015356v1 C 0 C 0 s nomLeu3.chr7b 112800658 746 + 115148730 ttattttatctttcaaattcagatctatattccagctagaattt-----------------------tgtgtgtgtgtgtgtgtgtgtgtgtgtgatgtgaaggtcaaagtttatttttc--tttttttacatataaatatgtaatagatccagcaccacttaatgaaaagact-------------actctcaggtggtacgtacgtcgtggcccaagtgactgagtatcgagttggtctgggtttcaactttctattcagttcagttgctctgtAGTT-CCTCCTTGATGGTTTACATTGTCTGTGAATATTGACAGTTATAGTTCTTACTTTACCATTCTTTTAAGGAATCAtttgaaaaattcacatattggtgaagccatacaggc-tagagttttctttgtggcaaatttcc-taatgacagatttaatttctttaatagatacaatctat---tccaaatagatttttttcaatgaat-ttggtaagctatatttttctaggaatttgacaatttcttctaaattttgaaatatattggtatatatgtc-aaaaattatatgtctttatctttttagtatctgcaatgtctgttgtgatgtacctttttaaaaattccatatattattcatttctcttttctgtcctgatcctagcaattattataggaagtttacaaaaattattagtctttttagggaaataaatgtttgctttttaagttttctattatatgtttattactttgtcaaatttaaatttaatttttttggattaacctatatt i nomLeu3.chr7b C 0 C 0 s cerAty1.NW_012001672v1 3435391 728 + 4669795 tt--------------atttagatctatattccagctagaac-----------------------------------------tttgtatgtgtgatgtgaaggtcaaagtttattttta--tttttttgcatataagtgtataattgatccagcaccacttaatgaaaagactgctctttccagccactctctggtgatacctatgtcgtgacccaagtgaccgagtattgagt-----tggttttcaacttcctactcagttcagttgctctGTAGTTCCCTCCTTGATGGTTTATATTGTCTGTGAATATTGACAGTTACAGTTCTTACTTTACCATTCTTTTTAGGAATCATTTGAAAAATTCATAcattggtgaagtcatacggacttagagttttctttgtggcaaatttcc-taatgacagatttaaactctttaatagatgcgatctgtttctccaaatagatttttttcaattagttttggtaaactatgtttttctatgagtttgacaatttcttctaaattttgaaatctattggtatacatgtcaaaaaattgtatgtctttatcttttcagtatctgtaatgtctgttgtgatgtacctttttaaaaaatccatatattattcatttctcttttctgtccttatcctagcaattgttatagggggtttataaaagttattagtctttttagagaaataaatttttgctgtttaatttttctattacatgtttattacttcatcaaatttaaatttaa-ttttttggattaacctacatt i cerAty1.NW_012001672v1 C 0 C 0 s chlSab2.chr7 134391472 733 + 135778131 ttattttatctttcaaatttagatctatattccagctagaac-----------------------------------------tttgcatgtgtgatgtgaaggtcaaagtttatttttc-ttttttttgcatataaatgtataattgatccagcaccacttaatgaaaagaccgttctttccagccactctcaggcgatacctatgtcgtgacccaagtgaccaagtattgagc-----tggttttcaacttcctactcagttcagttgctctgtagttccctccttgatggtttatattgtctgtgaatattgACAGTTATAGTTCTTACTTTACCATTCTTTTTAGGAATCAtttgaaaaattcacacattggtgaagccatatggacttagagttttctttgtggcaaatttcc-taatgacagatttaaactctttaatggatgcaatctgtttctccaaataaatttttttcaattagttttggtaagctatgtttttctatgaatttgacaatttcttctaaattttgaaatct----------atgtcaaaaaattgtatgtctttatctttttagtatctgtaatgtctgttgtgatgtaccttttaaaacattccatgtattattcatttctcttttctgtctttatcctagcaattgttatagggagtttataaaagttattagtctttttagagaaataaatttttgctgtttaatttttctattacatgtttattacttcatcaaatttaaatttaa-ttttttgaattaacctacatt i chlSab2.chr7 C 0 C 0 s manLeu1.NW_012107108v1 15451 728 + 1527111 tt--------------atttagatctatattccagctagaac-----------------------------------------tttgtatgtgtgatgtgaaggtcaaagtttatttttc--tttttttgcatataaatgtataattgatccagcaccacttaatgaaaagactgctctttccagccactctcaggtgatacctatgtcgtgacccaagtgaccgagtactgagt-----tggttttcaacttcctactcagttcagttgctctgtAGTTCCCTCTTTGATGGTTTATATTGTCTGTGAATATTGACAGTTACAGTTCTTACTTTACCATTCTTTTTAGGAATCAtttgaaaaattcacacattggtgaagtcatatggacttggagttttctttgtggcaaatttcc-taatgacagatttaaactctttaatagatgcgatctgtttctccaaatagatttttttcaattagttttggtaaactatgtttttctatgagtttgacaatttcttctaaattttgaaatctattggtatacatgtcaaaaaattgtatgtctttatcttttcagtatctgtaatgtctgttgtgatgtaccttttaaaaaaatccatatattattcatttctcttttctgtccttatcctagcaattgttatagggagtttataaaagttattagtctttttagagaaataaatttttgctgtttaatttttctattacatgtttattacttcatcaaatttaaatttaa-ttttttggattaacctacatt i manLeu1.NW_012107108v1 C 0 C 0 s colAng1.NW_012116221v1 957286 742 + 2368649 ttattttatctttcaaatttagatctatattccagctagaac-----------------------------------------tttgtgtgtgtgatgtgaaggtcaaagtttatttttc--tttttttgcatataaatgtataattgatccagcaccacttaatgaaaagactgctctttccagccactctcaggtgacacctatgtcgtgacccaagtgactgagtatcgagt-----tggttttcaacttcctactcagttcagttgctctgtagttccctccttgatggtttatattgtctgtgaatattgACAGTTATAGTTCTTACTTTACCATTCTTTTTAGGAATCATTTGAAAAACTCACAcattggtgaagccatgtggacttagagttttctttgtggcaaatttcc-taatgacagatttaaactctttaatagacgcaatctgtttttccaaatagatttttttcaattagttttggtaagctatgtttttctatgaatttgacactttcttctaaattttgaaatctattggtatacatgtcaaaaaattgtatgtctttatctttttagtatctgtaatgtctgttgtgatgtaccttttaaaaaattccatatattattcatttctcttttctgtccttatcctagcaattgttatagggagtttataaaagttattagtcttttcagagaaataaatttttgctgtttaatttttctattacatgtttattacttcatcaaatttaaatttaa-ttttttggattaacctacatt i colAng1.NW_012116221v1 C 0 C 0 s saiBol1.JH378165 13185348 774 - 14256875 ttattttacatttcaaatttagatgtacattccagctaggatttgtgtgtgtgt------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatgtaaaggtcaaagttgctttttctttttttatacatataaatatgtaattgatccagcatcacttattaaaaagactattcttttcagccactctaaggtgataggtatgtcatgaaccaagagactgagcatagagttggtctggttttgaac-----attcagttcagttgctctGTAGTTCCCTCCTTGATCATTCATATTGTCTGTGAATATTGACAGTTATATTTCTTTCTTTACCATGCTTTTAAGtaaacatttgaaaaattcacatgttggtgaagccatacaggcttagaattttctttgttgcaaatttcc-taatgacagatttaatttctttaatagatacaatctat---tccagttaga-ttttttcaattagttttggtaagctctacttttctaggaatttgacaatttcttctaaattttgaagtatattggtatatacgtc-aaaaattgtatgtgtttatctttttagtatctgtaatgtctgttgtgatatgc-cctttaaaaattccatgtattattaatttctcttttctttccttagcttagcaattattatagggagtttatacatattattagtctttttagggaaatacatttttgcgttttaatttttctattatatgtttattacttcatcaaatttaaatttaatttttgtgcattaacttacatt i saiBol1.JH378165 C 0 C 0 s cebCap1.NW_016107886v1 1080206 780 - 2196201 ttattttacatttcaaatttagatctacattcctgctaggatttgtgtgtgtgtgtttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatgtaaaggtcaaagtttctttttctttttttatacatataaatatgtaattgatccagtgtcagttattaaaaagactattcttttcagccactctaaggtgagaggtatgtcatgaaccaagagactgagtatagagctgatctggttttgaac-----attcagttcagttgctctGTAGTTCCCGCCTTGATCGTTTATATTGTCTGTGAATATTGACAGTTACATTTCTTTCTTTACCATTCTTTTAAGtaaacatttgaaaaattcacatattggtgaagccatacaggcttagaa-tttctttgttgcaaatttcc-taatgacagatttaatttctttaatagatacaatctat---tccaagtaga-ttttttcaattagctttggtaggctatacttttctaggaatttgacaatttcttctaaattttgaagtatattggtatatatgtcaaaaaattgtat-tgtttatctttttagtatctgtaatgtcggttgtgatatacgtttttaaaaattccatgtattattcatttctcttttctgtccttagcttagcacttattatagggagtttataaatattattagtctttttagggaaatacatttttgcgttttaatttttctattatatgtttattacttcatcaaatttaaatttaatttttatgaattaacttacatt i cebCap1.NW_016107886v1 C 0 N 0 s aotNan1.NW_018492112v1 3469388 766 - 5030052 ttattttacatttcaaatttagatctacattccagctaggatttgtgtgtgt--------gtgtgtgtgtgtgtgtgtgtgtatgtgtttgtgtaatgt-------aaagtttctttttc-ttttttatacatataaatatgtaattggtccagcatcacttattaaaaagactatccttttcagctactctaaggtgatacgtatgtcatgaaccaagagactgagtatagagttggtctggttttgaac-----attcagttcagttgctctatAGTTCCCTCCTTGATCATTTATATTGTCTGTGAATATAGACAGTTATATTTCTTTCTTTACCATTCTTTTAAGtaaacatttgaaaaattcacatattggtgaagccatacaggcttagaattttctttgttgcaaatttccttaataacagatttaatttctttaatagatacaatatat---tccaaataga-tttattcaattagttttggtaagctatacttttctaagaatttgacaagttcttctaaattttgaagtatattggtatatatgtcaaaaaattgtatgtgtttatctttttagtatttgtaatatctattgtgatgtacctttttaaaaattccatgtattattcatttctcttttctgtccttagcttagcaattattatagggagtttataaatattattagtctttttagggaaagaaatgtttgagttttaatttttctattatat-tttattacttcgtcaaatttaaatttaatttttatgaattaacttacatt i aotNan1.NW_018492112v1 C 0 C 0 a score=5005.000000 s hg38.chr4_KI270789v1_alt 205943 1 + 205944 T s panTro5.chr4 192990861 1 + 194502333 t i panTro5.chr4 C 0 N 0 s panPan2.chr4 192875295 1 + 195804263 t i panPan2.chr4 C 0 N 0 s gorGor5.CYUI01015356v1 3907519 1 + 4876863 t i gorGor5.CYUI01015356v1 C 0 N 0 s nomLeu3.chr7b 112801404 1 + 115148730 t i nomLeu3.chr7b C 0 N 0 s cerAty1.NW_012001672v1 3436119 1 + 4669795 t i cerAty1.NW_012001672v1 C 0 N 0 s chlSab2.chr7 134392205 1 + 135778131 t i chlSab2.chr7 C 0 N 0 s manLeu1.NW_012107108v1 16179 1 + 1527111 t i manLeu1.NW_012107108v1 C 0 N 0 s colAng1.NW_012116221v1 958028 1 + 2368649 t i colAng1.NW_012116221v1 C 0 N 0 s saiBol1.JH378165 13186122 1 - 14256875 t i saiBol1.JH378165 C 0 N 0 s aotNan1.NW_018492112v1 3470154 1 - 5030052 t i aotNan1.NW_018492112v1 C 0 N 0